HHsearch alignment of GI: 254780293 and MMDB domain: 2vqe_I_

>2vqe_I (I:) 30S ribosomal protein S9, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}
Probab=100.00  E-value=0  Score=339.06  Aligned_cols=127  Identities=47%  Similarity=0.785  Sum_probs=124.9

Q ss_pred             CCCEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf             55001311121089999981897399941008884469899999999998738566410799982598301888999999
Q gi|254780293|r   44 QRSYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGV  123 (170)
Q Consensus        44 g~~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaI  123 (170)
                      ...|++||||||+|+|||++|+|+|+|||+|+++||++..+++.+++||.+++..++|||+|+|+|||+||||+||||||
T Consensus         2 ~~~~~~GkRKta~A~v~l~~G~G~I~INg~~l~~yf~~~~~r~~v~~Pl~~~~~~~~~DI~~~V~GGG~sgQa~Air~ai   81 (128)
T 2vqe_I            2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGI   81 (128)
T ss_dssp             CCEEECCEETTEEEEEEEEESSCCEEESSSBHHHHSSSCSSGGGGGHHHHHHTCSTTEEEEEEEESSCHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCEEEEEEEECCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH
T ss_conf             46787250505899999983884499804267664417789999876654212257426899995598510588899999


Q ss_pred             HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99997657634487997798335755416759528984335430579
Q gi|254780293|r  124 AKALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR  170 (170)
Q Consensus       124 arAL~~~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR  170 (170)
                      ||||+.++|++++.|++.||||+|||++||||||++||||+||||||
T Consensus        82 araL~~~~~~~~~~lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR  128 (128)
T 2vqe_I           82 ARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR  128 (128)
T ss_dssp             HHHHHHHCGGGHHHHTTTTTTSCBCCCCCCCCSSSSBTTBCCCCCCC
T ss_pred             HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999979786899987688036541023577787665515244579