HHsearch alignment of GI: 254780293 and MMDB domain: 3jyv_I_
>3jyv_I (I:) 40S ribosomal protein S16(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_I
Probab=100.00 E-value=0 Score=314.04 Aligned_cols=125 Identities=29% Similarity=0.334 Sum_probs=117.1
Q ss_pred CEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCC-HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 001311121089999981897399941008884469-8999999999987385664107999825983018889999999
Q gi|254780293|r 46 SYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQ-DLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVA 124 (170)
Q Consensus 46 ~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~-~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIa 124 (170)
.|++||||||+|+|||++|+|+|+|||+|+++||++ ...++.+..||..++..++|||+|+|+|||+||||+|||||||
T Consensus 2 v~~~GrRKta~A~v~l~~G~G~I~INg~~~~~yf~~~~~~~~~~~~pl~~~~~~~~~Di~i~V~GGG~~gQa~Air~aia 81 (138)
T 3jyv_I 2 VQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIA 81 (138)
T ss_dssp BCCCCCSSSCEEEEEEEESCCCEEETTEEHHHHCCSSSTTGGGHHHHHTSSCSSSSEEEEEEEESCCTTTHHHHHHHHHH
T ss_pred CEEECCCEEEEEEEEEECCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 34166472089999998486549999933444088999999861587753233365016999967864279869999999
Q ss_pred HHHHHHC-----HHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9997657-----634487997------798335755416759528984335430579
Q gi|254780293|r 125 KALTYFQ-----PDLRPQIKK------GGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 125 rAL~~~~-----p~~r~~Lk~------~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
|||+.|+ |..++.||+ .||||+|+|++||||||++||||+||||||
T Consensus 82 raL~~~~~~~~~~~~r~~Lk~~~~~~d~glLtrD~R~~ErKK~G~~kARk~~q~skR 138 (138)
T 3jyv_I 82 KGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 138 (138)
T ss_dssp HTTTTCCCSSCSTTHHHHHHSSSCSSCCCSSSCCCCCCCCCCSSSSCSSSCSCCSCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 999986101268455799998875346675614624443688898665636366789