HHsearch results for GI: 254780293 and protein with PDBid: 2vqe_I
>2vqe_I 30S ribosomal protein S9, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.14.1.1 PDB: 1gix_L* 1hnw_I* 1hnx_I* 1hnz_I* 1hr0_I 1i94_I* 1i95_I* 1i96_I* 1i97_I* 1ibk_I* 1ibl_I* 1ibm_I 1j5e_I 1jgo_L* 1jgp_L* 1jgq_L* 1ml5_L* 1n32_I* 1n33_I* 1n34_I ...
Probab=100.00 E-value=0 Score=335.70 Aligned_cols=126 Identities=48% Similarity=0.786 Sum_probs=123.9
Q ss_pred CCEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 50013111210899999818973999410088844698999999999987385664107999825983018889999999
Q gi|254780293|r 45 RSYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVA 124 (170)
Q Consensus 45 ~~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIa 124 (170)
..|||||||||+|+|||++|+|+|+|||+|+++||+++.+++.+++||.+++..++|||+|+|+|||+||||+|||||||
T Consensus 3 ~~y~~GrRKta~Arv~l~~G~G~I~INg~~~~~yf~~~~~~~~~~~pl~~~~~~~k~DI~i~V~GGG~sgQa~Air~aia 82 (128)
T 2vqe_I 3 QYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIA 82 (128)
T ss_dssp CEEECCEETTEEEEEEEEESSCCEEESSSBHHHHSSSCSSGGGGGHHHHHHTCSTTEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEEECCEEEEEECCEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 78985746038999999858157999998699988579999998613654053455259999978866389999999999
Q ss_pred HHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9997657634487997798335755416759528984335430579
Q gi|254780293|r 125 KALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 125 rAL~~~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
|||+.++|++++.|++.||||+|+|++||||||++||||+||||||
T Consensus 83 RaL~~~~~~~~~~lk~~~lL~~D~R~~ErKK~G~~kARk~~Q~skR 128 (128)
T 2vqe_I 83 RALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR 128 (128)
T ss_dssp HHHHHHCGGGHHHHTTTTTTSCBCCCCCCCCSSSSBTTBCCCCCCC
T ss_pred HHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999979787898988789036753444586898776847366679