HHSEARCH alignment of GI: 254780293 and SCOP domain: d2gy9i1

Alignment
>d2gy9i1 d.14.1.1 (I:4-129) Ribosomal protein S9 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=341.01  Aligned_cols=125  Identities=48%  Similarity=0.792  Sum_probs=123.4

Q ss_pred             CEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             00131112108999998189739994100888446989999999999873856641079998259830188899999999
Q gi|254780293|r   46 SYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVAK  125 (170)
Q Consensus        46 ~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIar  125 (170)
                      .|||||||||+|+|||++|+|+|+||++|+++||++..+++.+++||.+++..++|||+|+|+|||+||||+||||||||
T Consensus         2 ~y~tGrRKtaiArv~l~~G~G~I~IN~~~~~~yf~~~~~~~~~~~pl~~~~~~~~~di~v~V~GGG~sgQa~Air~aIaR   81 (126)
T d2gy9i1           2 YYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITR   81 (126)
T ss_dssp             EEECCEETTEEEEEEEEESSSCEEETTEEHHHHTTTCGGGGGGGHHHHHTTCGGGEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEEEEECCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf             50316251589999999267679787045755353576999997678763655514689998469813589899999999


Q ss_pred             HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             997657634487997798335755416759528984335430579
Q gi|254780293|r  126 ALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR  170 (170)
Q Consensus       126 AL~~~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR  170 (170)
                      ||+.++|++++.|+++||||+|||++||||||++||||+||||||
T Consensus        82 aLv~~~~~~r~~lk~~glLt~D~R~~ErKK~G~~kARk~~Q~skR  126 (126)
T d2gy9i1          82 ALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR  126 (126)
T ss_dssp             HHHHHCGGGHHHHTTTTTTSCCCCCCCCCCSSSSSSSSCCCCSCC
T ss_pred             HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             998869787899988769026743354477898664527355679


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Translational machinery components
domain: Ribosomal protein S9
species: Escherichia coli [TaxId: 562]