HHsearch alignment for GI: 254780294 and conserved domain: CHL00194

Probab=97.76  E-value=0.0003  Score=45.52  Aligned_cols=116  Identities=16%  Similarity=0.113  Sum_probs=64.7

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-----------------HHHHCCCCEEEECCCCHH---
Q ss_conf             079997588678999999986299728999965300786006-----------------677479989999389837---
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERHNLRYR-----------------EDLLNAADVSILCLPDVA---   61 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~ag~~~~-----------------~~~~~~~Divf~a~p~~~---   61 (311)
T Consensus         1 M~ILV~GATG~lGr~vVr~Ll~~G-~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~~~   79 (319)
T CHL00194          1 MSLLVIGATGTLGRQIVRRALDEG-YQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPSDL   79 (319)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf             979998998589999999999688-9089995786763234215967999427887789999659967999456677886


Q ss_pred             ----------HHHHHHHHHHCCCCEEEECCCCCHHHH--HHHHHCCCCCC-HHHHHHCCCCEEEECCCCCCC
Q ss_conf             ----------899999986125848982276303555--43110021000-477652049607725842113
Q gi|254780294|r   62 ----------SLEIIQLIKKNGINSRIIDTSTAHRIA--PGWVYGFPEMD-KSQKEKIRSARYITNPGCYAT  120 (311)
Q Consensus        62 ----------s~~~~~~~~~~g~~~~vid~ss~~R~~--~~vpl~vPEvN-~~~~~~~~~~~iIanPnC~~t  120 (311)
T Consensus        80 ~~~~~vd~~g~~~li~AAk~aGVk-r~V~lS~-lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlRPs~F~q  149 (319)
T CHL00194         80 NNAYQIDLEGKLALIEAAKAAKVK-RFIFFSI-LNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFRLAGFFQ  149 (319)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCC-EEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf             208898898899999999984998-8999613-566668875677879999999986799859984739999