HHsearch alignment for GI: 254780294 and conserved domain: COG0569
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].
Probab=93.86 E-value=0.45 Score=25.88 Aligned_cols=145 Identities=19% Similarity=0.173 Sum_probs=79.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCC--------------------CCCCCCCHHHHCCCCEEEECCCCHH
Q ss_conf 07999758867899999998629972899996530--------------------0786006677479989999389837
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEE--------------------RHNLRYREDLLNAADVSILCLPDVA 61 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~--------------------~ag~~~~~~~~~~~Divf~a~p~~~ 61 (311)
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCEEEEEECCCH
T ss_conf 98999898-5788999999987899-089997688999986320004499992688989998679863899999808867
Q ss_pred HHHHHHHHH-H-CCCCEEEECCCCCHHHHHHHHHC-CCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 899999986-1-25848982276303555431100-21000477652049607725842113311247888885034556
Q gi|254780294|r 62 SLEIIQLIK-K-NGINSRIIDTSTAHRIAPGWVYG-FPEMDKSQKEKIRSARYITNPGCYATGAIAILRPLRKAKLLPDR 138 (311)
Q Consensus 62 s~~~~~~~~-~-~g~~~~vid~ss~~R~~~~vpl~-vPEvN~~~~~~~~~~~iIanPnC~~t~~~laL~PL~~~~~i~~~ 138 (311)
T Consensus 79 ~N~i~~~la~~~~gv~~viar~~~~~~~~~~~~~g~~~ii~Pe~~~~~~l~~~i~~p~~~~~~------~~~~--~--~~ 148 (225)
T COG0569 79 VNSVLALLALKEFGVPRVIARARNPEHEKVLEKLGADVIISPEKLAAKRLARLIVTPGALDVL------ELAG--G--DA 148 (225)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCHHEEE------ECCC--C--CC
T ss_conf 999999999987399849999569416778986799489755899999999985388631034------4269--9--72
Q ss_pred CCEEEEEECCCCCCCCCCCH
Q ss_conf 50267651233335610000
Q gi|254780294|r 139 YPITINAVSGYTGGGKKLIS 158 (311)
Q Consensus 139 ~~~~~~~~sg~sgaG~~~~~ 158 (311)
T Consensus 149 ~~~~~~v~~~~~~~g~~L~e 168 (225)
T COG0569 149 EVIEEKVAEDSPLAGKTLRE 168 (225)
T ss_pred EEEEEEECCCCCCCCCCHHH
T ss_conf 38999935898257759899