HHsearch alignment for GI: 254780294 and conserved domain: COG0771
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane].
Probab=92.15 E-value=0.86 Score=24.13 Aligned_cols=89 Identities=15% Similarity=0.104 Sum_probs=63.3
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC-----------CCCC-----CHHHHCCCCEEEECCCCHHHHH
Q ss_conf 90799975886789999999862997289999653007-----------8600-----6677479989999389837899
Q gi|254780294|r 1 MYKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH-----------NLRY-----REDLLNAADVSILCLPDVASLE 64 (311)
Q Consensus 1 M~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a-----------g~~~-----~~~~~~~~Divf~a~p~~~s~~ 64 (311)
T Consensus 7 ~~kv~V~GL-G~sG~a~a~~L~~~G-~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~~~p 84 (448)
T COG0771 7 GKKVLVLGL-GKSGLAAARFLLKLG-AEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPPTHP 84 (448)
T ss_pred CCEEEEEEC-CCCCHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHHCCCCEEECCCCCHHCCCCCCEEEECCCCCCCCH
T ss_conf 997999926-651099999999779-869998389876532344442037223137641100134778998999999888
Q ss_pred HHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf 9999861258489822763035554311
Q gi|254780294|r 65 IIQLIKKNGINSRIIDTSTAHRIAPGWV 92 (311)
Q Consensus 65 ~~~~~~~~g~~~~vid~ss~~R~~~~vp 92 (311)
T Consensus 85 ~v~~A~~~gi~-i~~dieL~~r~~~~~p 111 (448)
T COG0771 85 LVEAAKAAGIE-IIGDIELFYRLSGEAP 111 (448)
T ss_pred HHHHHHHCCCC-EEEHHHHHHHHCCCCC
T ss_conf 99999986993-7748888987448999