HHsearch alignment for GI: 254780294 and conserved domain: PRK07680
>PRK07680 late competence protein ComER; Validated.
Probab=93.73 E-value=0.22 Score=27.85 Aligned_cols=84 Identities=10% Similarity=0.267 Sum_probs=49.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCC---EEEEEEECCCCC---------CCCC---CHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf 0799975886789999999862997---289999653007---------8600---667747998999938983789999
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRKD---LCLLSIPCEERH---------NLRY---REDLLNAADVSILCLPDVASLEII 66 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp~---~~l~~l~s~~~a---------g~~~---~~~~~~~~Divf~a~p~~~s~~~~ 66 (311)
T Consensus 1 MkI~fIG~-GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~dvIiLaVKPq~~~~vl 79 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESRAVKPSCLTITNRTPAKAYHIKEKYPSIHVAKTIEEVIEQSELIFICVKPLDIYPLL 79 (273)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEECCHHHHHHCCCEEEEECCHHHHHHHH
T ss_conf 98999876-99999999999977998945699988998999999987699088688899984099899964888899999
Q ss_pred HHHHHC-CCCEEEECCCCCHH
Q ss_conf 998612-58489822763035
Q gi|254780294|r 67 QLIKKN-GINSRIIDTSTAHR 86 (311)
Q Consensus 67 ~~~~~~-g~~~~vid~ss~~R 86 (311)
T Consensus 80 ~~i~~~~~~~~~iISi~AGis 100 (273)
T PRK07680 80 KKLAPHFSDEKCLVSITSPIS 100 (273)
T ss_pred HHHHHHCCCCCEEEEECCCCC
T ss_conf 998863478848999558888