HHsearch alignment for GI: 254780294 and conserved domain: PRK12416
>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=92.90 E-value=0.35 Score=26.54 Aligned_cols=77 Identities=19% Similarity=0.204 Sum_probs=47.1
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCC-----CCEEEEEEECCCCCCCCCCHHHHCCCCEEEECCCCHH---HHHHHHHHHHC
Q ss_conf 907999758867899999998629-----9728999965300786006677479989999389837---89999998612
Q gi|254780294|r 1 MYKIFIDGEHGTTGLKIRSRIVQR-----KDLCLLSIPCEERHNLRYREDLLNAADVSILCLPDVA---SLEIIQLIKKN 72 (311)
Q Consensus 1 M~kVaIvGATG~vG~~li~lL~~h-----p~~~l~~l~s~~~ag~~~~~~~~~~~Divf~a~p~~~---s~~~~~~~~~~ 72 (311)
T Consensus 1 Mk~vaVIGg-GISGLsaA~~L~~~~~~~~~~~~vtl~Eas~r~GG~I~T~~~--~g~~~E~GP~s~~~~~~~~~~L~~eL 77 (466)
T PRK12416 1 MKTVVVIGG-GITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHSVEE--KDFIMESGADSIVARNEHVMPLVKDL 77 (466)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEE--CCEEEECCCCCCCCCCHHHHHHHHHC
T ss_conf 975999899-789999999998725555899867999779988677989973--99997559860034887899999986
Q ss_pred CCCEEEEC
Q ss_conf 58489822
Q gi|254780294|r 73 GINSRIID 80 (311)
Q Consensus 73 g~~~~vid 80 (311)
T Consensus 78 GL~d~li~ 85 (466)
T PRK12416 78 NLEEEMVY 85 (466)
T ss_pred CCCCCCCC
T ss_conf 99311446