HHsearch alignment for GI: 254780294 and conserved domain: PRK12416

>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=92.90  E-value=0.35  Score=26.54  Aligned_cols=77  Identities=19%  Similarity=0.204  Sum_probs=47.1

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCC-----CCEEEEEEECCCCCCCCCCHHHHCCCCEEEECCCCHH---HHHHHHHHHHC
Q ss_conf             907999758867899999998629-----9728999965300786006677479989999389837---89999998612
Q gi|254780294|r    1 MYKIFIDGEHGTTGLKIRSRIVQR-----KDLCLLSIPCEERHNLRYREDLLNAADVSILCLPDVA---SLEIIQLIKKN   72 (311)
Q Consensus         1 M~kVaIvGATG~vG~~li~lL~~h-----p~~~l~~l~s~~~ag~~~~~~~~~~~Divf~a~p~~~---s~~~~~~~~~~   72 (311)
T Consensus         1 Mk~vaVIGg-GISGLsaA~~L~~~~~~~~~~~~vtl~Eas~r~GG~I~T~~~--~g~~~E~GP~s~~~~~~~~~~L~~eL   77 (466)
T PRK12416          1 MKTVVVIGG-GITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHSVEE--KDFIMESGADSIVARNEHVMPLVKDL   77 (466)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEE--CCEEEECCCCCCCCCCHHHHHHHHHC
T ss_conf             975999899-789999999998725555899867999779988677989973--99997559860034887899999986


Q ss_pred             CCCEEEEC
Q ss_conf             58489822
Q gi|254780294|r   73 GINSRIID   80 (311)
Q Consensus        73 g~~~~vid   80 (311)
T Consensus        78 GL~d~li~   85 (466)
T PRK12416         78 NLEEEMVY   85 (466)
T ss_pred             CCCCCCCC
T ss_conf             99311446