HHsearch alignment for GI: 254780294 and conserved domain: TIGR00243
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesizes 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms . In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis.; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process.
Probab=94.36 E-value=0.059 Score=31.34 Aligned_cols=34 Identities=15% Similarity=0.323 Sum_probs=30.7
Q ss_pred CCE-EEEECCCCHHHHHHHHHHHCCC-CEEEEEEEC
Q ss_conf 907-9997588678999999986299-728999965
Q gi|254780294|r 1 MYK-IFIDGEHGTTGLKIRSRIVQRK-DLCLLSIPC 34 (311)
Q Consensus 1 M~k-VaIvGATG~vG~~li~lL~~hp-~~~l~~l~s 34 (311)
T Consensus 2 ~K~~i~iLGSTGSIG~~TL~v~~~~~~~f~~~aL~~ 37 (406)
T TIGR00243 2 LKQNIVILGSTGSIGKQTLDVVRHHPDKFQVVALSA 37 (406)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 755236743775013568999973887089986403