HHsearch alignment for GI: 254780294 and conserved domain: TIGR02717
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=91.79 E-value=0.53 Score=25.44 Aligned_cols=84 Identities=10% Similarity=0.246 Sum_probs=60.5
Q ss_pred CEEEEECCC---CHHHHHHHHHHHCC-CCEEEEEEECCC---CCC-CCCC---HHH-HCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 079997588---67899999998629-972899996530---078-6006---677-47998999938983789999998
Q gi|254780294|r 2 YKIFIDGEH---GTTGLKIRSRIVQR-KDLCLLSIPCEE---RHN-LRYR---EDL-LNAADVSILCLPDVASLEIIQLI 69 (311)
Q Consensus 2 ~kVaIvGAT---G~vG~~li~lL~~h-p~~~l~~l~s~~---~ag-~~~~---~~~-~~~~Divf~a~p~~~s~~~~~~~ 69 (311)
T Consensus 8 ~SvAVIGAS~~~gKVGy~i~~NL~~~Gy~G~~YPVNpk~~i~i~Gr~k~Y~~~~~~dP~~VDLAVivvPa~~vp~v~eEC 87 (457)
T TIGR02717 8 KSVAVIGASRDEGKVGYAIMKNLIEGGYKGKIYPVNPKAGIEILGRVKAYPSVLEIDPDEVDLAVIVVPAKLVPQVVEEC 87 (457)
T ss_pred CCEEEECCCCCCCCCCHHHHEEEECCCCEEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 71589712488985100220000037830368762278871463011457871114899734799972856799999998
Q ss_pred HHCCCCEEEECCCCCHH
Q ss_conf 61258489822763035
Q gi|254780294|r 70 KKNGINSRIIDTSTAHR 86 (311)
Q Consensus 70 ~~~g~~~~vid~ss~~R 86 (311)
T Consensus 88 G~KGVkg~vvI~AG-F~ 103 (457)
T TIGR02717 88 GEKGVKGAVVITAG-FK 103 (457)
T ss_pred HHCCCEEEEEECCC-CC
T ss_conf 61795189997148-64