HHsearch alignment for GI: 254780294 and conserved domain: cd01338

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.86  E-value=0.0047  Score=38.13  Aligned_cols=56  Identities=16%  Similarity=0.241  Sum_probs=37.7

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCC------CCEEEEEEECCCCC----CCCCC------------------HHHHCCCCEE
Q ss_conf             07999758867899999998629------97289999653007----86006------------------6774799899
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQR------KDLCLLSIPCEERH----NLRYR------------------EDLLNAADVS   53 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~h------p~~~l~~l~s~~~a----g~~~~------------------~~~~~~~Div   53 (311)
T Consensus         3 ~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~amDl~~~a~~~~~~v~~~~~~~~a~~~aDvV   82 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA   82 (322)
T ss_pred             EEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCEEEECCHHHHHCCCCEE
T ss_conf             09999899968999999999711130799726999975757566676577445326765458779748878983788789


Q ss_pred             EECC
Q ss_conf             9938
Q gi|254780294|r   54 ILCL   57 (311)
Q Consensus        54 f~a~   57 (311)
T Consensus        83 vita   86 (322)
T cd01338          83 LLVG   86 (322)
T ss_pred             EEEC
T ss_conf             9936