HHsearch alignment for GI: 254780294 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=95.18 E-value=0.2 Score=28.04 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=47.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEEE---------------ECCCCCCCC------------------------C
Q ss_conf 0799975886789999999862997289999---------------653007860------------------------0
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSI---------------PCEERHNLR------------------------Y 42 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l---------------~s~~~ag~~------------------------~ 42 (311)
T Consensus 2 skVlivG~-GglG~~~~~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i 80 (134)
T pfam00899 2 SRVLVVGA-GGLGSPAAEYLARAGVGKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPERL 80 (134)
T ss_pred CEEEEECC-CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 88999898-88999999999993897499998956763222722423364668810799999999778995899992567
Q ss_pred C----HHHHCCCCEEEECCCCHHHHHHHHHHH-HCCCCEEEECCC
Q ss_conf 6----677479989999389837899999986-125848982276
Q gi|254780294|r 43 R----EDLLNAADVSILCLPDVASLEIIQLIK-KNGINSRIIDTS 82 (311)
Q Consensus 43 ~----~~~~~~~Divf~a~p~~~s~~~~~~~~-~~g~~~~vid~s 82 (311)
T Consensus 81 ~~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~~~~--ip~i~~~ 123 (134)
T pfam00899 81 TPENLEELLKGADLVVDALDNFAARYLLNDACVKRG--IPLISAG 123 (134)
T ss_pred CHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCC--CCEEEEE
T ss_conf 977876426448899999899999999999999859--9899955