HHsearch alignment for GI: 254780294 and conserved domain: pfam01488

>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=96.78  E-value=0.0032  Score=39.15  Aligned_cols=87  Identities=15%  Similarity=0.162  Sum_probs=57.2

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCC-CC--------CCC-----CC--HHHHCCCCEEEECCCCHH---H
Q ss_conf             07999758867899999998629972899996530-07--------860-----06--677479989999389837---8
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEE-RH--------NLR-----YR--EDLLNAADVSILCLPDVA---S   62 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~-~a--------g~~-----~~--~~~~~~~Divf~a~p~~~---s   62 (311)
T Consensus        13 ~~vlVIGa-G~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~~~l~~~l~~~DivI~aT~s~~~ii~   91 (134)
T pfam01488        13 KKVLLIGA-GEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALPLDELEELLAEADIVISATSAPTPIIT   91 (134)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEEECCCCCCEEC
T ss_conf             98999996-09999999999975998899954757899999998499725898513544136319999992599973648


Q ss_pred             HHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf             999999861258489822763035554311
Q gi|254780294|r   63 LEIIQLIKKNGINSRIIDTSTAHRIAPGWV   92 (311)
Q Consensus        63 ~~~~~~~~~~g~~~~vid~ss~~R~~~~vp   92 (311)
T Consensus        92 ~~~~~~---~~~~~~iiDLavPrnvd~~v~  118 (134)
T pfam01488        92 KEMVEE---ALKGLLFVDIAVPRDIEPEVG  118 (134)
T ss_pred             HHHHHH---CCCCEEEEEECCCCCCCHHHC
T ss_conf             999974---439859998347888665454