HHsearch alignment for GI: 254780295 and conserved domain: KOG2554
>KOG2554 consensus.
Probab=100.00 E-value=0 Score=342.82 Aligned_cols=226 Identities=28% Similarity=0.377 Sum_probs=193.9
Q ss_pred EEEEEEEECCCCCEEEEECCC--CCCHHHHHHHHHHHH-HC---CCEEEEECCCCCCCCEEEEEEEEEEECCCCCC----
Q ss_conf 299999971668720048753--877889999999997-09---95699971121386122234688640632110----
Q gi|254780295|r 3 RYCMIIEYNGSGYFGWQRQKN--GSSIQGSIEKAIFLV-TG---EIVVVHGAGRTDSGVHALRQVAHFDLVREWVP---- 72 (247)
Q Consensus 3 r~~~~i~YdGt~y~G~q~Q~~--~~TVq~~le~aL~~~-~~---~~~~~~~a~RTD~GVhA~~qv~~f~~~~~~~~---- 72 (247)
T Consensus 67 ~IAlkiaY~GW~Y~Gla~Qe~T~~~TIEg~l~eAL~kt~Lies~~~~~ysRCGRTDKGVSAfgQviSl~lRS~~p~~~s~ 146 (425)
T KOG2554 67 HIALKIAYLGWNYQGLAPQEHTNNPTIEGKLFEALKKTRLIESRQTCNYSRCGRTDKGVSAFGQVISLVLRSRIPMPDSQ 146 (425)
T ss_pred EEEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHH
T ss_conf 89999987345557621478899854678999999860124673214502037765203454323345420368995142
Q ss_pred -----------HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCHHH
Q ss_conf -----------468999998618887654344322677755000210022355685244320233321024433333566
Q gi|254780295|r 73 -----------VILCKALNAYLKISDTISILNLSIVDKQFHARFSAIRRSYLYRIITRQAPLALEKGRAWLIPKSLDCEN 141 (247)
Q Consensus 73 -----------~~~~~~lN~~L~~p~~Irv~~~~~v~~~FhaR~~a~~R~Y~Y~i~~~~~~~~~~~~~~~~~~~~lD~~~ 141 (247)
T Consensus 147 ~~~~~~a~~~Ei~Y~~mLN~vL--P~dIRi~awapvp~~FsARFsC~~RtYrY~F~----------------k~dLdI~~ 208 (425)
T KOG2554 147 RDAVATADSEEIPYVHMLNRVL--PPDIRIVAWAPVPPTFSARFSCVQRTYRYYFP----------------KKDLDIDR 208 (425)
T ss_pred HCCCCCCCCCCCCHHHHHHCCC--CCCCEEEEEECCCCCCCCEEEHHHCEEEEECC----------------CCCCCHHH
T ss_conf 0133324456464888874138--98605999725998755134510122467526----------------88968899
Q ss_pred HHHHHHHHHCCHHEEEECCCCC--CCCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 5565676520011001024565--53332110331111233320---011315888899999999999999976899888
Q gi|254780295|r 142 MRIAAQHLVGRHDFTTFRSIHC--QASSPIRTIDHFDVNSFGNL---IEIRVVARSFLHTQIRSFVGSLKLVGDGKWTST 216 (247)
Q Consensus 142 l~~a~~~l~G~HdF~~F~~~~~--~~~~~~R~I~~~~v~~~~~~---i~i~i~g~~FL~~mVR~mVG~li~v~~g~~~~~ 216 (247)
T Consensus 209 M~kAA~l~vGe~DFrNFCK~D~~n~vtny~Rti~s~kV~~~~~~~~my~ldi~g~AFLwHqVRcimaiL~liGq~~E~p~ 288 (425)
T KOG2554 209 MSKAASLLVGEHDFRNFCKIDVSNGVTNYERTILSAKVEDVGQTPGMYYLDIQGSAFLWHQVRCIMAILFLIGQGLEQPS 288 (425)
T ss_pred HHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 99999987240234456650304445788765241467873788845999961122399999999999999625667706
Q ss_pred HHHHHHHCCCC--CCCCCCCCCCCCEEEEEEE
Q ss_conf 99999835882--1166636989847633043
Q gi|254780295|r 217 DLEKALQAQDR--KECGPLAPPEGLYFDSVEY 246 (247)
Q Consensus 217 ~i~~~L~~~~r--~~~~~~APa~GL~L~~V~Y 246 (247)
T Consensus 289 lI~dLldIek~P~kPqY~mA~~~PL~LydC~f 320 (425)
T KOG2554 289 LISDLLDIEKNPQKPQYTMASDYPLELYDCDF 320 (425)
T ss_pred HHHHHHHCCCCCCCCEEEECCCCCEEEEECCC
T ss_conf 88998741248998614204578547775477