RPSBLAST alignment for GI: 254780295 and conserved domain: COG0101
>gnl|CDD|30450 COG0101, TruA, Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]. Length = 266
Score = 290 bits (743), Expect = 3e-79
Identities = 112/246 (45%), Positives = 148/246 (60%), Gaps = 2/246 (0%)
Query: 1 MIRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQ 60
M R + I Y+G+ + GWQRQ N ++QG +EKA+ + GE V V GAGRTD+GVHAL Q
Sbjct: 1 MKRIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHALGQ 60
Query: 61 VAHFDLVREWVPVILCKALNAYLKISDTISILNLSIVDKQFHARFSAIRRSYLYRIITRQ 120
V HFD + L +ALNA L I +L+++ V FHARFSA R+Y Y I
Sbjct: 61 VVHFDTPADRPLEKLVRALNALLP--PDIRVLDVAEVPDDFHARFSAKSRTYRYIIYNAP 118
Query: 121 APLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNSF 180
W +P LD + MR AA+ L+G HDFT+FR CQ+ SP+RTI DV+
Sbjct: 119 LRPPFLANYVWHVPYPLDLDAMREAAKLLLGTHDFTSFRKAGCQSKSPVRTIYRIDVSRD 178
Query: 181 GNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGLY 240
G+LI I + SFL +R+ VG+L LVG GK +++ L+A+DRK GP AP EGLY
Sbjct: 179 GDLIVIDISGNSFLWHMVRNIVGALLLVGRGKRPVEWIKELLEAKDRKLAGPTAPAEGLY 238
Query: 241 FDSVEY 246
V+Y
Sbjct: 239 LVRVDY 244