RPSBLAST alignment for GI: 254780295 and conserved domain: KOG2554
>gnl|CDD|37765 KOG2554, KOG2554, KOG2554, Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]. Length = 425
Score = 88.1 bits (218), Expect = 2e-18
Identities = 65/263 (24%), Positives = 96/263 (36%), Gaps = 56/263 (21%)
Query: 15 YFGW-------QRQKNGSSIQGSIEKAIF---LVTG-EIVVVHGAGRTDSGVHALRQVAH 63
Y GW Q N +I+G + +A+ L+ + GRTD GV A QV
Sbjct: 74 YLGWNYQGLAPQEHTNNPTIEGKLFEALKKTRLIESRQTCNYSRCGRTDKGVSAFGQVIS 133
Query: 64 FDLV---------REWVP------VILCKALNAYLKISDTISILNLSIVDKQFHARFSAI 108
L R+ V + LN L I I+ + V F ARFS +
Sbjct: 134 LVLRSRIPMPDSQRDAVATADSEEIPYVHMLNRVL--PPDIRIVAWAPVPPTFSARFSCV 191
Query: 109 RRSYLYRIITRQAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTF--RSIHCQAS 166
+R+Y Y + K LD + M AA LVG HDF F + +
Sbjct: 192 QRTYRY----------------YFPKKDLDIDRMSKAASLLVGEHDFRNFCKIDVSNGVT 235
Query: 167 SPIRTIDH---FDVNSFGNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQ 223
+ RTI DV + + + +FL Q+R + L L+G G
Sbjct: 236 NYERTILSAKVEDVGQTPGMYYLDIQGSAFLWHQVRCIMAILFLIGQGL---EQPSLISD 292
Query: 224 AQDRKECGPLAPPEGLYFDSVEY 246
D ++ P + Y + +Y
Sbjct: 293 LLDIEK----NPQKPQYTMASDY 311