RPSBLAST alignment of GI: 254780295 and protein with PDBid: 1dj0
>1dj0_A Pseudouridine synthase I; alpha/beta fold, RNA-binding motif, RNA-modifying enzyme, lyase; 1.50A {Escherichia coli} SCOP: d.265.1.1 PDB: 2nqp_A 2nr0_A 2nre_A Length = 264
Score = 271 bits (695), Expect = 9e-74
Identities = 90/246 (36%), Positives = 130/246 (52%), Gaps = 2/246 (0%)
Query: 1 MIRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQ 60
+ + + IEY+GS Y+GWQRQ S+Q +EKA+ V E + V AGRTD+GVH Q
Sbjct: 3 VYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQ 62
Query: 61 VAHFDLVREWVPVILCKALNAYLKISDTISILNLSIVDKQFHARFSAIRRSYLYRIITRQ 120
V HF+ +NA L I++ + V FHARFSA R Y Y I +
Sbjct: 63 VVHFETTALRKDAAWTLGVNANLP--GDIAVRWVKTVPDDFHARFSATARRYRYIIYNHR 120
Query: 121 APLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNSF 180
A+ + LD E M AAQ L+G +DFT+FR++ CQ+ +P R + H +V
Sbjct: 121 LRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRH 180
Query: 181 GNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGLY 240
G + + + A +F+H +R+ VGSL VG + + + L A+DR A EGLY
Sbjct: 181 GPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLY 240
Query: 241 FDSVEY 246
+V+Y
Sbjct: 241 LVAVDY 246