HHsearch alignment for GI: 254780297 and conserved domain: PRK00150
>PRK00150 def peptide deformylase; Reviewed.
Probab=100.00 E-value=0 Score=406.60 Aligned_cols=163 Identities=47% Similarity=0.841 Sum_probs=157.4
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCC
Q ss_conf 98773645769310521213787888999999999986500476421302201440003773164323348210016442
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKI 80 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I 80 (170)
T Consensus 1 M~i~~Iv~~~dpvLr~~a~~V~~~~~~~~~li~dM~~tM~~~~GvGLAApQIG~~~ri~vi~~~~~~--~~~~v~INP~I 78 (163)
T PRK00150 1 MAILPILRYGDPRLRKVAKPVEPVDDELRKLIDDMLETMYAAPGIGLAAPQVGVSKRIIVIDVSEEK--DEPLVLINPEI 78 (163)
T ss_pred CCCCCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEEEEEECCCCC--CCCEEEECCEE
T ss_conf 9822011079979947373799799899999999999998689948885665975018999825678--86269999864
Q ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHH
Q ss_conf 01000001110000012232101211000002463235855799972976464327001319768536478899999999
Q gi|254780297|r 81 ITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITK 160 (170)
Q Consensus 81 ~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~ 160 (170)
T Consensus 79 ~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~Drl~~~~~~~~~k 158 (163)
T PRK00150 79 IEKSGELATLEEGCLSVPGVYGEVPRPERVTVKALDRDGKPFELEADGLLARCIQHEIDHLNGVLFIDRLSPLKRQRIKK 158 (163)
T ss_pred ECCCCCEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHHHHCCEECHHHCCHHHHHHHHH
T ss_conf 14689788721551147999656535898999998689969999976444500132758438890067389999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780297|r 161 KMSKL 165 (170)
Q Consensus 161 k~~k~ 165 (170)
T Consensus 159 k~~kl 163 (163)
T PRK00150 159 KLKKI 163 (163)
T ss_pred HHHCC
T ss_conf 98619