HHsearch alignment of GI: 254780297 and MMDB domain: 1zxz_A_
>1zxz_A (A:) PDF, peptide deformylase, mitochondrial; PDF1A, eukaryote, higher plant, zinc ION, hydrolase; 2.80A {Arabidopsis thaliana} PDB: 1zy0_A 1zy1_A
Probab=100.00 E-value=0 Score=380.68 Aligned_cols=169 Identities=31% Similarity=0.452 Sum_probs=157.2
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCC---------
Q ss_conf 98773645769310521213787---888999999999986500476421302201440003773164323---------
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEK---INSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAH--------- 68 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~---~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~--------- 68 (170)
|++++|++||||+||++|+||+. +++++++++++|++||++++||||||||||+++|+|||++++...
T Consensus 1 M~i~~Iv~~~~p~Lr~~~~pV~~~~~~~~~~~~li~~M~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~~~~~~~~~~~ 80 (197)
T 1zxz_A 1 MDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEIL 80 (197)
T ss_dssp -CCCCCCCTTSGGGTSCCBCCCTTTTTSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEEECHHHHHSSCHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHH
T ss_conf 97054141899788356732796567879999999999999987587550100553327799998774224558502222
Q ss_pred -----CCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCC
Q ss_conf -----348210016442010000011100000122321012110000024632358557999729764643270013197
Q gi|254780297|r 69 -----RKNPMVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNG 143 (170)
Q Consensus 69 -----~~~~~~~iNP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G 143 (170)
...+.++|||+|++.|+++..+||||||+||+++.|+||.+|+|+|+|++|++++.+++||+|||+|||+|||+|
T Consensus 81 ~~~~~~~~~~vlINP~i~~~s~~~~~~~EGCLSvp~~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G 160 (197)
T 1zxz_A 81 AQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDG 160 (197)
T ss_dssp HTTCCCEEEEEEEEEEEEESSSCEEEEEEEETTEEEEEEEEEEESEEEEEEECTTCCEEEEEEEHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCC
T ss_conf 21014667569878704860684776035665555754320023666889832789639999802101224058572288
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 68536478899999999999998504
Q gi|254780297|r 144 ILFIDHLSRLKRDMITKKMSKLVQLR 169 (170)
Q Consensus 144 ~lf~drls~~kr~~~~~k~~k~~k~k 169 (170)
++|+||+++.++..+.++++++.+.+
T Consensus 161 ~lf~Drl~~~~~~~~~~~~~~~~~~~ 186 (197)
T 1zxz_A 161 NLYVDKMVPRTFRTVDNLDLPLAEGC 186 (197)
T ss_dssp CCGGGTBCTTCCEEGGGTTSCCCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 88565029889999998888776269