HHsearch results for GI: 254780297 and protein with PDBid: 2okl_A
>2okl_A Peptide deformylase 2; hydrolase; HET: BB2 CIT; 1.70A {Bacillus cereus atcc 14579} PDB: 1lqy_A*
Probab=100.00 E-value=0 Score=373.62 Aligned_cols=163 Identities=32% Similarity=0.469 Sum_probs=143.6
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCC-CHH----HHHHHH--------HHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCC
Q ss_conf 987736457693105212137878-889----999999--------9998650047642130220144000377316432
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKI-NSD----IMNLID--------NMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHA 67 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~-~~~----~~~li~--------dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~ 67 (170)
|++++|++||||+||++|++|+.+ +++ ++++++ +|.+||++.+|+||||||||+++|+||+++++..
T Consensus 3 M~v~~Iv~~~dp~Lr~~~~~V~~~~~~~~~~~i~~li~~~~~~~~~~m~~tm~~~~GvGLAApQIGi~~rifvi~~~~~~ 82 (185)
T 2okl_A 3 LTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDAD 82 (185)
T ss_dssp CCGGGCCCTTCGGGGSCCBCCCSSCCHHHHHHHHHHHHHHHHHTSHHHHHHTTCCCCSEEEGGGGTCCBSEEEEEEECTT
T ss_pred CCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCEEEEEEEECC
T ss_conf 62301522799799176701687742566799999999999746889999874489818764454875416999986121
Q ss_pred CCCCCCEECCCCCCCHHHHHHH--HHHHCCCCCC-CCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCE
Q ss_conf 3348210016442010000011--1000001223-210121100000246323585579997297646432700131976
Q gi|254780297|r 68 HRKNPMVFINPKIITFSDDFSV--YQEGCLSIPD-YRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGI 144 (170)
Q Consensus 68 ~~~~~~~~iNP~I~~~s~e~~~--~~EGCLS~Pg-~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~ 144 (170)
+...+.++|||+|++.|+++.. .||||||+|| +++.|+||.+|+|+|+|++|++++.+++||.|||||||+|||+|+
T Consensus 83 ~~~~~~v~iNP~I~~~s~e~~~~~~~EGCLS~Pg~~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~~QHE~DHL~G~ 162 (185)
T 2okl_A 83 GTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGV 162 (185)
T ss_dssp CCEEEEEEEEEEEEEECSSEEECTTCCCCTTCCSCCCSCCCEESEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCE
T ss_conf 23454325577246306651111456797076655542335532899999889995999998866657897888974888
Q ss_pred EEEEECCHHHHHHHHHHHH
Q ss_conf 8536478899999999999
Q gi|254780297|r 145 LFIDHLSRLKRDMITKKMS 163 (170)
Q Consensus 145 lf~drls~~kr~~~~~k~~ 163 (170)
||+||+|+.++..+.++++
T Consensus 163 lf~Drl~~~~~~~~~~e~~ 181 (185)
T 2okl_A 163 MFYDHINKENPFAAPDDSK 181 (185)
T ss_dssp CGGGGSCSSCTTCCCSSEE
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 1045158115324067778