HHsearch results for GI: 254780297 and protein with PDBid: 3g5k_A
>3g5k_A Peptide deformylase, mitochondrial; actinonin, hydrolase, iron, metal- binding, mitochondrion, protein biosynthesis, transit peptide; HET: BB2; 1.70A {Homo sapiens} PDB: 3g5p_A
Probab=100.00 E-value=0 Score=377.14 Aligned_cols=154 Identities=29% Similarity=0.511 Sum_probs=143.5
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCC---------
Q ss_conf 9877364576931052121378788---8999999999986500476421302201440003773164323---------
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKIN---SDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAH--------- 68 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~---~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~--------- 68 (170)
|++++|++||||+||++|+||+.++ ++++++++||++||++++||||||||||+++|+||++.++...
T Consensus 2 M~~~~Iv~~gdpiLr~~a~~V~~~~~~~~~l~~li~dM~~tm~~~~GvGLAApQIG~~~rifvi~~~~~~~~~~~~~~~~ 81 (183)
T 3g5k_A 2 MSFSHVCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELPEALCRECPPRQRA 81 (183)
T ss_dssp CCCCCCCCTTCGGGTSCCBCCCGGGTTCHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEEECHHHHHTSCHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 88123140698789440636874467889999999999999987899487302458601089997375323336621121
Q ss_pred -----CCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCC
Q ss_conf -----348210016442010000011100000122321012110000024632358557999729764643270013197
Q gi|254780297|r 69 -----RKNPMVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNG 143 (170)
Q Consensus 69 -----~~~~~~~iNP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G 143 (170)
...+.++|||+|+..|+++..++|||||+||+++.|+||.+|+|+|+|++|++++.+++||+|||||||+|||+|
T Consensus 82 ~~~~~~~~~~v~iNP~i~~~s~~~~~~~EGCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G 161 (183)
T 3g5k_A 82 LRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQG 161 (183)
T ss_dssp HHTCCCEEEEEEEEEEEEEEEEEEEEEEECCTTSTTEEEEEEEEEEEEEEEECTTSCEEEEEEEHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHCCC
T ss_conf 00136766166345089994264102014445889951771757730899987999799999940022112046471088
Q ss_pred EEEEEECCHHH
Q ss_conf 68536478899
Q gi|254780297|r 144 ILFIDHLSRLK 154 (170)
Q Consensus 144 ~lf~drls~~k 154 (170)
+||+||+|+..
T Consensus 162 ~lf~Drls~~~ 172 (183)
T 3g5k_A 162 CLFIDKMDSRT 172 (183)
T ss_dssp CCGGGTSCGGG
T ss_pred EEEEEECCCCC
T ss_conf 87888518463