HHsearch results for GI: 254780297 and protein with PDBid: 3oca_A

>3oca_A Peptide deformylase; ssgcid, structur genomics, seattle structural genomics center for infectious hydrolase; 2.40A {Ehrlichia chaffeensis}
Probab=100.00  E-value=0  Score=404.00  Aligned_cols=169  Identities=41%  Similarity=0.686  Sum_probs=160.0

Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCC-----------
Q ss_conf             987736457693105212137878889999999999865004764213022014400037731643233-----------
Q gi|254780297|r    1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHR-----------   69 (170)
Q Consensus         1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~-----------   69 (170)
                      |++++|++||||+||++|+||+.+|+++++|++||++||++++||||||||||+++|+||++.+++...           
T Consensus        22 M~vl~Iv~~pdp~Lr~~a~~V~~~d~~l~~li~dM~~Tm~~~~GvGLAApQIG~~~rifvi~~~~~~~~~~~~~~~~~~~  101 (209)
T 3oca_A           22 MSVLSIVTVPDKRLSLCSEEVEKVDQSIRKLVDDMFETMHANQGLGLAAVQVGVHKRILVMNVPEEFEDSEDIENVEDKI  101 (209)
T ss_dssp             -CCCCCCCTTCGGGGSCCBCCSCCCHHHHHHHHHHHHHHHHHTCSEEEGGGGTCCBSEEEEEECC--------CCSSCCC
T ss_pred             CEEEECCCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             26412432799799485726896898999999999999987899554266639763489997774223321111211112


Q ss_pred             ------CCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCC
Q ss_conf             ------48210016442010000011100000122321012110000024632358557999729764643270013197
Q gi|254780297|r   70 ------KNPMVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNG  143 (170)
Q Consensus        70 ------~~~~~~iNP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G  143 (170)
                            ..+.+||||+|++.|+++..++|||||+||+++.|+||.+|+|+|+|++|+.++.+++||+|||||||+|||+|
T Consensus       102 ~~~~~~~~~~vlINP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G  181 (209)
T 3oca_A          102 EGYELYGGPYCIINPKIVDISQEKVKLKEGCLSVPGYFDYIVRPQRIAVQYLDYNGNECIIKAQGWLARCLQHEIDHLNG  181 (209)
T ss_dssp             TTCBSSEEEEEEEEEEEEEECSCEEEEEECCTTSTTCCEEEEEESCEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCEEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCHHEEEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHCC
T ss_conf             22114678469986737862765788641444448876666362239999998059199999976454688687684388


Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf             68536478899999999999998504
Q gi|254780297|r  144 ILFIDHLSRLKRDMITKKMSKLVQLR  169 (170)
Q Consensus       144 ~lf~drls~~kr~~~~~k~~k~~k~k  169 (170)
                      +||+||+|+++|.++.+|++|+.|..
T Consensus       182 iLf~Drls~~kr~~~~~k~~k~~k~~  207 (209)
T 3oca_A          182 TVFLKYLSKFKRDFAIEKVKKKERTD  207 (209)
T ss_dssp             CCGGGGSCHHHHHHHHHHHHHHTSCC
T ss_pred             CCHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf             93468489989999999999987422