PSIBLAST alignment of GI: 254780297 and protein with PDB id: 1lqw

gi|22219285|pdb|1LQW|A Chain A, Crystal Structure Of S.Aureus Peptide Deformylase Length = 183
>gi|22219286|pdb|1LQW|B Chain B, Crystal Structure Of S.Aureus Peptide Deformylase Length = 183
>gi|75766236|pdb|2AI9|A Chain A, S.Aureus Polypeptide Deformylase Length = 183
>gi|75766237|pdb|2AI9|B Chain B, S.Aureus Polypeptide Deformylase Length = 183
 Score = 88.3 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 17/168 (10%)

Query: 2   VKKPLVIFPDPILRRVSRPIE-KINSDIMNLIDNMLEVMYSTDGI------------GLA 48
             K ++    P LR+ +  +E  +  +    +  M E + ++               GLA
Sbjct: 3   TMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLA 62

Query: 49  AVQIGVLYRLVVIDLQDHAHRKNPMVFINPKIITFSDDFSVY----QEGCLSIPDYRADV 104
           A QI +  R++ + + D    K+    +    I        Y    +       +    V
Sbjct: 63  APQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLV 122

Query: 105 KRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSR 152
            R   IT++  D       +   G  A   QHE+DHLNG++F DH+ +
Sbjct: 123 HRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDK 170