RPSBLAST alignment of GI: 254780297 and protein with PDBid: 1v3y
>1v3y_A Peptide deformylase; protein synthesis, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.81A {Thermus thermophilus} SCOP: d.167.1.1 Length = 192
Score = 152 bits (386), Expect = 3e-38
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVV 60
MV P+ ++ DP+LRR +RP+E + I L ++MLE M+ G+GLAA QIG+ RL V
Sbjct: 1 MVY-PIRLYGDPVLRRKARPVEDFS-GIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFV 58
Query: 61 I----------DLQDHAHRKNPMVFINPKIITFSDDFSVYQEGCLSIPD-YRADVKRSAF 109
+ + + + +IT+ + EGCLS+P Y +V R+
Sbjct: 59 AVEYADEPEGEEERPLRELVRRVYVVANPVITYREGLVEGTEGCLSLPGLYSEEVPRAER 118
Query: 110 ITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITKKMSK 164
I V Y D + +++ +G +A QHE+DHL+GILF + L + KR+ +
Sbjct: 119 IRVEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKREAFLEANRA 173