HHsearch alignment for GI: 254780298 and conserved domain: PRK10452
>PRK10452 multidrug efflux system protein MdtJ; Provisional.
Probab=99.96 E-value=1.2e-28 Score=157.42 Aligned_cols=104 Identities=21% Similarity=0.311 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 98999999999999999999953022222121122345666679999999999999999999997033899999999999
Q gi|254780298|r 1 MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAII 80 (118)
Q Consensus 1 M~wl~l~~~i~~~~~g~i~lK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~aL~~~~ls~ayp~~s~~~~ 80 (118)
T Consensus 2 ~~Wl~L~lAI~~EV~gT~~LK~s~-------------gft~~~p~i~~~~~y~~sf~~Ls~alk~ipvgvAYAiWsGvG~ 68 (120)
T PRK10452 2 IYWILLALAIATEITGTLSMKWAS-------------VSEGNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGI 68 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 889999999999999999989981-------------7887338999999999999999999811727999999998999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999389999899999999999999998724
Q gi|254780298|r 81 IIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117 (118)
Q Consensus 81 v~~~~~~~~~f~E~~~~~~~~Gi~lIi~Gvili~~~t 117 (118)
T Consensus 69 ~~itlig~~~F~E~l~~~~~~gi~lIi~GVv~l~~gs 105 (120)
T PRK10452 69 LFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCC
T ss_conf 9999999999679897999999999998784042478