BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780298|ref|YP_003064711.1| putative transmembrane protein
[Candidatus Liberibacter asiaticus str. psy62]
         (118 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780298|ref|YP_003064711.1| putative transmembrane protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039975|gb|ACT56771.1| putative transmembrane protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 118

 Score =  233 bits (594), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI
Sbjct: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI 118
           MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI
Sbjct: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI 118


>gi|315122860|ref|YP_004063349.1| putative transmembrane protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496262|gb|ADR52861.1| putative transmembrane protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/117 (61%), Positives = 89/117 (76%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKWI LLAN+   +LS VFIK+S           D  R S+ K FWLGFFFYA SFF YI
Sbjct: 1   MKWIVLLANIIFSILSCVFIKISTTSQGENTALTDPMRLSNDKFFWLGFFFYAASFFFYI 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           +VV+ FS+++AQT+VTS+IIII TC+SSLIWD+PFYWTT IGI+ + +GITLISF+T
Sbjct: 61  IVVSQFSLQVAQTLVTSSIIIIVTCISSLIWDKPFYWTTGIGILLITLGITLISFNT 117


>gi|323525030|ref|YP_004227183.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
 gi|323382032|gb|ADX54123.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
          Length = 118

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 62/116 (53%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +A    +SV +K++++PP   P  +D         FWLG   Y  +F  Y 
Sbjct: 1   MKWLILVLGIASNASASVLVKIAMMPPRRFPSISDPIGALKNGPFWLGLALYGAAFLLYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             ++   + +AQ V+T+  I     LS  I+ EPF WT  +GI+F++ G+ LI+  
Sbjct: 61  AALSRLPLNVAQPVLTAGAIASVAILSVAIFREPFPWTVGVGILFIIAGVALITAR 116


>gi|190572690|ref|YP_001970535.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190010612|emb|CAQ44221.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 119

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 54/115 (46%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           KW+ L+  +     +S  IK+++  P   P   D         FW G   Y  +F  Y M
Sbjct: 3   KWLILVVGILCNAGASALIKVAVSAPRQFPSLTDPMGALRNWPFWTGLSLYGGAFLLYSM 62

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +A   + +A  + T+  I +  C+S + + EP  WTT  GI  ++ G+ LI+ H
Sbjct: 63  SLARLPLNVAHPISTAGAIALVACVSVIAFREPMPWTTVAGIALILSGVVLITVH 117


>gi|119899879|ref|YP_935092.1| multidrug efflux transporter protein [Azoarcus sp. BH72]
 gi|119672292|emb|CAL96206.1| hypothetical multidrug efflux transporter protein [Azoarcus sp.
           BH72]
          Length = 118

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +     +SV +K +++PP   P  AD         FWLG   Y  +F  Y 
Sbjct: 1   MKWLILVLGILSNASASVLVKYAMLPPRRFPSLADPMAALSNWPFWLGLALYGGAFLLYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             +A   + +A  V+TS  +      S +++ EPF+WTTA G++ V+ G+ LI+F 
Sbjct: 61  AALARLPLNVAHPVLTSGAVATVALFSVVLFSEPFHWTTAAGVVLVIAGVFLITFR 116


>gi|315617994|gb|EFU98586.1| small multidrug resistance protein [Escherichia coli 3431]
          Length = 97

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%)

Query: 22  MSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIII 81
           M+++PP   P   D         FWLG   Y  +F  Y   +A F + IA  V+T+  + 
Sbjct: 1   MAMMPPRKFPSLGDPLASLSNWPFWLGLTLYGGAFLFYAGALAVFPLNIAHPVLTTGAVA 60

Query: 82  IATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
               LS L+++E F WTT  G++FV++G+ LI+
Sbjct: 61  AVAVLSVLVFNETFQWTTIAGVVFVIVGVALIT 93


>gi|119944228|ref|YP_941908.1| small multidrug resistance protein [Psychromonas ingrahamii 37]
 gi|119862832|gb|ABM02309.1| small multidrug resistance protein [Psychromonas ingrahamii 37]
          Length = 116

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 52/110 (47%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +     +SV IK+++   EAP   ++            G   Y ++F  Y 
Sbjct: 1   MKWLILILGILSNASASVLIKVAMSSKEAPIQLSNPLSIIGNLPLVSGIALYGMAFILYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           + + +  + IA  ++TS  I + +  S L++ E        GI F++IG+
Sbjct: 61  LALTYLPLNIAHPILTSGSIALVSSASVLLFGENLSIINVAGIFFIIIGV 110


>gi|296046243|gb|ADG86352.1| virion transmembrane glycoprotein G [Tibrogargan virus]
          Length = 662

 Score = 38.1 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 31  PHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAI---IIIATCLS 87
           P  +D +R S+GK FW    F   +F        H  VRI    +T  I   I+     S
Sbjct: 454 PLHSDDSRLSNGKRFWTRHSFQGANFH------EHPGVRIGVNGITYDIRKQILRFPSTS 507

Query: 88  SLIWDEPFYWTTAIGIMF 105
           +L+WD P Y++T   + F
Sbjct: 508 NLLWDLPSYYSTKHRVHF 525


>gi|269216641|ref|ZP_06160495.1| SugE protein [Slackia exigua ATCC 700122]
 gi|269129875|gb|EEZ60958.1| SugE protein [Slackia exigua ATCC 700122]
          Length = 104

 Score = 37.0 bits (84), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 33  FAD-STRFSDG--KLFWL-GF-FFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLS 87
           FAD S + SDG  K  W+ G    Y +SF+    V+A   + +   + T   I++   + 
Sbjct: 15  FADTSMKLSDGFRKKAWIVGIAVGYLVSFYLMSHVLAELPLGLTYAIWTGVSIVLTAIVG 74

Query: 88  SLIWDEPFYWTTAIGIMFVMIGITLIS 114
            +IW E F W   +G+  +++G+ L+ 
Sbjct: 75  RIIWKELFTWKKVLGMALIIVGVALLR 101


>gi|157364133|ref|YP_001470900.1| small multidrug resistance protein [Thermotoga lettingae TMO]
 gi|157314737|gb|ABV33836.1| small multidrug resistance protein [Thermotoga lettingae TMO]
          Length = 114

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLF--WLGFFFYAISFFTYIM 61
           IALL N     L+++F+K+          F+ S  F   K F  WLG  F+ +SF  Y +
Sbjct: 5   IALLTNS----LANIFVKLGASSYRETGSFS-SFFFHCLKNFYIWLGLLFFGLSFVFYSL 59

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
            +    +  A  ++T A  II T  S L++ E       +GI+ +  GI L+S
Sbjct: 60  SLTKTKLSTAYPIMTGAGFIIVTVASILLFKENISSLKIVGILLIATGIWLVS 112


>gi|149191244|ref|ZP_01869500.1| hypothetical protein VSAK1_04202 [Vibrio shilonii AK1]
 gi|148834914|gb|EDL51895.1| hypothetical protein VSAK1_04202 [Vibrio shilonii AK1]
          Length = 141

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMF 105
           +G   YA+S   ++M + H  + +A  +++ + +I+     +L W +E F W    GI F
Sbjct: 66  IGLGCYALSMACWVMALKHLPLGVAYPLLSLSYVIVYLLAVTLPWLNESFSWVKLSGIGF 125

Query: 106 VMIGITLI 113
           +++G+T I
Sbjct: 126 ILLGLTFI 133


>gi|270289929|ref|ZP_06196155.1| small multidrug resistance protein [Pediococcus acidilactici 7_4]
 gi|304385822|ref|ZP_07368166.1| DMT superfamily multidrug transporter EmrE [Pediococcus
           acidilactici DSM 20284]
 gi|270281466|gb|EFA27298.1| small multidrug resistance protein [Pediococcus acidilactici 7_4]
 gi|304328326|gb|EFL95548.1| DMT superfamily multidrug transporter EmrE [Pediococcus
           acidilactici DSM 20284]
          Length = 106

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y I F+ + + +   ++ IA  V     I++   ++ L W EP      +GI F+++G+ 
Sbjct: 39  YGICFYFFSLSLKTINLNIAYAVWAGIGILLTAVIAFLFWKEPINLGNILGIFFIIVGVV 98

Query: 112 LISFH 116
           ++SF+
Sbjct: 99  ILSFY 103


>gi|294507347|ref|YP_003571405.1| Conserved hypothetical protein, membrane [Salinibacter ruber M8]
 gi|294343675|emb|CBH24453.1| Conserved hypothetical protein, membrane [Salinibacter ruber M8]
          Length = 196

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 10/77 (12%)

Query: 40  SDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTT 99
           ++ +L     +  A++  T ++++AH+   +   ++TSA+       +S  W EP +W T
Sbjct: 29  TNDRLRGEALYLVALTGLTILLLMAHY---LGWALLTSALA------ASQGW-EPLFWQT 78

Query: 100 AIGIMFVMIGITLISFH 116
            +G + V+ G+ L+ F 
Sbjct: 79  QVGSVLVLAGLGLVGFR 95


>gi|300865637|ref|ZP_07110410.1| putative Transporter protein [Oscillatoria sp. PCC 6506]
 gi|300336364|emb|CBN55560.1| putative Transporter protein [Oscillatoria sp. PCC 6506]
          Length = 128

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 3   WIALLANVALGVLSSVFIK--MSIIPPEAPPHFADST-RFSDGKLFWLGFFFYAISFFTY 59
           ++ LLA +  GVL    +K   +I+ P    +  +     +   L W+G   Y +  F +
Sbjct: 6   FLVLLAAILCGVLGQFSLKGAANILGPIGAANLVEKAIAMASQPLIWVGLILYGLGAFGF 65

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           I+V++  ++ I   +++ + I +      +I++EP      +G+  +M G+  +
Sbjct: 66  IVVLSRANISIVSPLLSISYICVVLG-GKIIFNEPLPPLRLVGVALIMTGVVFV 118


>gi|312887336|ref|ZP_07746937.1| RhaT l-rhamnose-proton symport 2 [Mucilaginibacter paludis DSM
           18603]
 gi|311300139|gb|EFQ77207.1| RhaT l-rhamnose-proton symport 2 [Mucilaginibacter paludis DSM
           18603]
          Length = 376

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 24  IIPPEAP----PHFADSTRFSDGKLFWLGFFF---YAISFFTYIMVVAHFSVRIAQTVV 75
           I+PP A     PHFAD  R ++G +  L +FF   + I   TY + V +  V +  T++
Sbjct: 46  IVPPVAAYLTVPHFADIIRATNGGIIMLTYFFGLLWGIGGLTYGLGVRYLGVSLGSTII 104


>gi|325106464|ref|YP_004276118.1| RhaT l-rhamnose-proton symport 2 [Pedobacter saltans DSM 12145]
 gi|324975312|gb|ADY54296.1| RhaT l-rhamnose-proton symport 2 [Pedobacter saltans DSM 12145]
          Length = 358

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 24  IIPPEAP----PHFADSTRFSDGKLFWLGFFF---YAISFFTYIMVVAHFSVRIAQTVVT 76
           I+PP A     P + D  + ++G + WL +FF   + I   TY + V +  V +  +++ 
Sbjct: 46  IVPPLAAYLTIPGYIDIIKHTNGNILWLTYFFGVLWGIGGLTYGLGVRYLGVALGSSIIL 105

Query: 77  SAIIIIATCLSSLIWD 92
               +  + + S+ +D
Sbjct: 106 GLCSVFGSLIPSIYYD 121


>gi|157374059|ref|YP_001472659.1| hypothetical protein Ssed_0920 [Shewanella sediminis HAW-EB3]
 gi|257096138|sp|A8FRQ8|ARNF_SHESH RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnF; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnF; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnF
 gi|157316433|gb|ABV35531.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 145

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMFV 106
           G F YA+S   ++M +    + IA  +++ + +++      L W +EP  W    GI  +
Sbjct: 68  GLFCYALSMACWVMALKRLPLSIAYPLLSLSYVLVYLGAVYLPWLNEPLSWVKGTGIFLI 127

Query: 107 MIGI 110
           ++G+
Sbjct: 128 LLGL 131


>gi|268592583|ref|ZP_06126804.1| PbgE3 protein [Providencia rettgeri DSM 1131]
 gi|291311997|gb|EFE52450.1| PbgE3 protein [Providencia rettgeri DSM 1131]
          Length = 135

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMF 105
           LG   YA+S   +++ + H ++  A  +++ + + +      L W +EP     AIGI F
Sbjct: 56  LGLVCYALSMLCWLLALKHIALNKAYPLISLSYVFVYLLAVFLPWFNEPATGLKAIGIGF 115

Query: 106 VMIGITLIS 114
           +++G+ LIS
Sbjct: 116 ILLGVWLIS 124


>gi|307299205|ref|ZP_07579006.1| small multidrug resistance protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915001|gb|EFN45387.1| small multidrug resistance protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 123

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 37/69 (53%)

Query: 46  WLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMF 105
           WLG   + ++F  Y +V+    + +A  ++TSA   I T ++  ++DE       +GI  
Sbjct: 52  WLGLLSFGVAFIFYSVVLTRMKLGVAYPIMTSAGFAIVTVVAVFLFDERLSVMKIVGIAV 111

Query: 106 VMIGITLIS 114
           + +GI L++
Sbjct: 112 IALGIWLVA 120


>gi|316967985|gb|EFV52329.1| SAC3/GANP family protein [Trichinella spiralis]
          Length = 2269

 Score = 33.5 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 41  DGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTA 100
           +G LF L  F   I+ F  ++       R+ +T     I+I    LSSL W  P YW   
Sbjct: 101 EGGLFILRGFDCCITGFVLLVCNRMLGSRLKRTRHRYYIVIPIAILSSLSWFYPTYWYVH 160

Query: 101 IG-IMFVMIGITLISFHTI 118
              I+F+ + +    FH I
Sbjct: 161 FRWILFIPMAVIAGGFHNI 179


>gi|302337203|ref|YP_003802409.1| protein of unknown function DUF6 transmembrane [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634388|gb|ADK79815.1| protein of unknown function DUF6 transmembrane [Spirochaeta
           smaragdinae DSM 11293]
          Length = 119

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%)

Query: 46  WLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMF 105
           W G   + I F  Y +++    + +   +VTS  +I  T LS  +  EP      +G  F
Sbjct: 50  WTGGICFVIGFLLYSVILQKAELSMVYPIVTSGSLIAITLLSLFVLHEPITLMDFLGFGF 109

Query: 106 VMIGITLI 113
           +++GI LI
Sbjct: 110 ILLGIGLI 117


>gi|116492714|ref|YP_804449.1| membrane transporter [Pediococcus pentosaceus ATCC 25745]
 gi|116102864|gb|ABJ68007.1| Membrane transporter of cations and cationic drugs [Pediococcus
           pentosaceus ATCC 25745]
          Length = 108

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVM 107
           GF FY +S     +VV +  + IA  + +   II+ T +S  ++  P    T +GI+F+ 
Sbjct: 41  GFAFYFLS-----LVVKNIPINIAYAIWSGVGIILMTVISVFVFHNPINVPTVLGILFIT 95

Query: 108 IGITLIS 114
           +G+ L++
Sbjct: 96  LGVILVN 102


Searching..................................................done


Results from round 2




>gi|190572690|ref|YP_001970535.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190010612|emb|CAQ44221.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 119

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 54/115 (46%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           KW+ L+  +     +S  IK+++  P   P   D         FW G   Y  +F  Y M
Sbjct: 3   KWLILVVGILCNAGASALIKVAVSAPRQFPSLTDPMGALRNWPFWTGLSLYGGAFLLYSM 62

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +A   + +A  + T+  I +  C+S + + EP  WTT  GI  ++ G+ LI+ H
Sbjct: 63  SLARLPLNVAHPISTAGAIALVACVSVIAFREPMPWTTVAGIALILSGVVLITVH 117


>gi|254780298|ref|YP_003064711.1| putative transmembrane protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039975|gb|ACT56771.1| putative transmembrane protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 118

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI
Sbjct: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI 118
           MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI
Sbjct: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI 118


>gi|323525030|ref|YP_004227183.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
 gi|323382032|gb|ADX54123.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
          Length = 118

 Score =  117 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 62/116 (53%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +A    +SV +K++++PP   P  +D         FWLG   Y  +F  Y 
Sbjct: 1   MKWLILVLGIASNASASVLVKIAMMPPRRFPSISDPIGALKNGPFWLGLALYGAAFLLYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             ++   + +AQ V+T+  I     LS  I+ EPF WT  +GI+F++ G+ LI+  
Sbjct: 61  AALSRLPLNVAQPVLTAGAIASVAILSVAIFREPFPWTVGVGILFIIAGVALITAR 116


>gi|119899879|ref|YP_935092.1| multidrug efflux transporter protein [Azoarcus sp. BH72]
 gi|119672292|emb|CAL96206.1| hypothetical multidrug efflux transporter protein [Azoarcus sp.
           BH72]
          Length = 118

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 61/116 (52%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +     +SV +K +++PP   P  AD         FWLG   Y  +F  Y 
Sbjct: 1   MKWLILVLGILSNASASVLVKYAMLPPRRFPSLADPMAALSNWPFWLGLALYGGAFLLYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             +A   + +A  V+TS  +      S +++ EPF+WTTA G++ V+ G+ LI+F 
Sbjct: 61  AALARLPLNVAHPVLTSGAVATVALFSVVLFSEPFHWTTAAGVVLVIAGVFLITFR 116


>gi|315122860|ref|YP_004063349.1| putative transmembrane protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496262|gb|ADR52861.1| putative transmembrane protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 118

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 72/117 (61%), Positives = 89/117 (76%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKWI LLAN+   +LS VFIK+S           D  R S+ K FWLGFFFYA SFF YI
Sbjct: 1   MKWIVLLANIIFSILSCVFIKISTTSQGENTALTDPMRLSNDKFFWLGFFFYAASFFFYI 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           +VV+ FS+++AQT+VTS+IIII TC+SSLIWD+PFYWTT IGI+ + +GITLISF+T
Sbjct: 61  IVVSQFSLQVAQTLVTSSIIIIVTCISSLIWDKPFYWTTGIGILLITLGITLISFNT 117


>gi|119944228|ref|YP_941908.1| small multidrug resistance protein [Psychromonas ingrahamii 37]
 gi|119862832|gb|ABM02309.1| small multidrug resistance protein [Psychromonas ingrahamii 37]
          Length = 116

 Score = 98.5 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 55/116 (47%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L+  +     +SV IK+++   EAP   ++            G   Y ++F  Y 
Sbjct: 1   MKWLILILGILSNASASVLIKVAMSSKEAPIQLSNPLSIIGNLPLVSGIALYGMAFILYA 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           + + +  + IA  ++TS  I + +  S L++ E        GI F++IG+  ++ +
Sbjct: 61  LALTYLPLNIAHPILTSGSIALVSSASVLLFGENLSIINVAGIFFIIIGVWALTVN 116


>gi|315617994|gb|EFU98586.1| small multidrug resistance protein [Escherichia coli 3431]
          Length = 97

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 50/93 (53%)

Query: 22  MSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIII 81
           M+++PP   P   D         FWLG   Y  +F  Y   +A F + IA  V+T+  + 
Sbjct: 1   MAMMPPRKFPSLGDPLASLSNWPFWLGLTLYGGAFLFYAGALAVFPLNIAHPVLTTGAVA 60

Query: 82  IATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
               LS L+++E F WTT  G++FV++G+ LI+
Sbjct: 61  AVAVLSVLVFNETFQWTTIAGVVFVIVGVALIT 93


>gi|89071908|ref|ZP_01158504.1| hypothetical protein SKA34_07738 [Photobacterium sp. SKA34]
 gi|89052009|gb|EAR57460.1| hypothetical protein SKA34_07738 [Photobacterium sp. SKA34]
          Length = 94

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%)

Query: 1  MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
          MKW+ L+  +     +SV IK+++    AP   +             G   Y ++F  Y 
Sbjct: 1  MKWLILVLGILSNASASVLIKVAVTNTSAPIQLSKPLSIIGNIPLVSGLSLYGLAFMLYA 60

Query: 61 MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEP 94
          + + +  + IA   +TS  I +    S   + E 
Sbjct: 61 VSLTYLPLNIAHPTLTSGSIALVAIASVAFFGET 94


>gi|157364133|ref|YP_001470900.1| small multidrug resistance protein [Thermotoga lettingae TMO]
 gi|157314737|gb|ABV33836.1| small multidrug resistance protein [Thermotoga lettingae TMO]
          Length = 114

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFADST-RFSDGKLFWLGFFFYAISFFTYIMVVA 64
           LL  +    L+++F+K+          F+            WLG  F+ +SF  Y + + 
Sbjct: 3   LLIALLTNSLANIFVKLGASSYRETGSFSSFFFHCLKNFYIWLGLLFFGLSFVFYSLSLT 62

Query: 65  HFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
              +  A  ++T A  II T  S L++ E       +GI+ +  GI L+S 
Sbjct: 63  KTKLSTAYPIMTGAGFIIVTVASILLFKENISSLKIVGILLIATGIWLVSV 113


>gi|307299205|ref|ZP_07579006.1| small multidrug resistance protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915001|gb|EFN45387.1| small multidrug resistance protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 123

 Score = 53.8 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 3/114 (2%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADS---TRFSDGKLFWLGFFFYAISFFTYI 60
           I LL  +     +++ +K  +                        WLG   + ++F  Y 
Sbjct: 7   IVLLVAIVFNAGANILLKHGMQNAPDINSVGLKGMLVNSITNISVWLGLLSFGVAFIFYS 66

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +V+    + +A  ++TSA   I T ++  ++DE       +GI  + +GI L++
Sbjct: 67  VVLTRMKLGVAYPIMTSAGFAIVTVVAVFLFDERLSVMKIVGIAVIALGIWLVA 120


>gi|162450408|ref|YP_001612775.1| putative conserved membrane protein [Sorangium cellulosum 'So ce
           56']
 gi|161160990|emb|CAN92295.1| putative Conserved membrane protein [Sorangium cellulosum 'So ce
           56']
          Length = 123

 Score = 47.7 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 48/117 (41%), Gaps = 3/117 (2%)

Query: 3   WIALLANVALGVLSSVFIKMS---IIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTY 59
           ++ L+  +     +++ +K++   +   E       +          LG   +A +   Y
Sbjct: 5   YLFLIIALVFNATANILMKLASRRVPSMEGLSLVEKALALVTNYHLVLGLVLFASNILFY 64

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           ++ +   ++ IA  +++S   ++ +  S     E        GI+ +  GI L++++
Sbjct: 65  VLALKRINLSIAYPIMSSGGFLLISVFSVYFLHETLTGLQIGGIVLIAAGIALLAYN 121


>gi|24215845|ref|NP_713326.1| cation transporter protein [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656855|ref|YP_000941.1| small multidrug resistance protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24197043|gb|AAN50344.1| cation transporter protein [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600091|gb|AAS69578.1| small multidrug resistance protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 128

 Score = 47.7 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 4   IALLANVALGVLSSVFIKMSIIP--PEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           +  +  +    L+++ IK S +    E P       +     +F  G   + ++   Y  
Sbjct: 7   VVFIIALVFNALANILIKASSLKDVSEKPDGIQGMLQVIFNPMFIGGLASFGLALLGYRF 66

Query: 62  VVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           V+     + +A  V TSA  I+   +SS+ + E   W+   GI+ +++G+ L + +
Sbjct: 67  VLGKGLKLSLAYPVFTSAGFILVLIVSSIAFKERLTWSQWAGIILILVGVWLCAAN 122


>gi|13488179|ref|NP_085597.1| hypothetical protein mll9408 [Mesorhizobium loti MAFF303099]
 gi|14027846|dbj|BAB54438.1| mll9408 [Mesorhizobium loti MAFF303099]
          Length = 117

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV 63
           I +LA      + ++ +K S I     P  A  T       F  G  FY I+   +   +
Sbjct: 7   IMVLAAGLNSCIGNMLLKWSRIS---LPTDAGPTDKFLSISFIGGLLFYGINVVFFAKAL 63

Query: 64  AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
               V +A  ++  +   +    S  I+ EPF+ +  IG+  V+ GI L++
Sbjct: 64  DSMEVSVAYPILAGSAFAMLAVASYYIFGEPFHLSKRIGLSLVLAGIILLA 114


>gi|89895312|ref|YP_518799.1| hypothetical protein DSY2566 [Desulfitobacterium hafniense Y51]
 gi|89334760|dbj|BAE84355.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 124

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSD----GKLFWLGFFFYAISFFTYIM 61
           ++ +V LG    + +K+     E      +  R             G F Y +SF  +I 
Sbjct: 11  IIISVILGAFGQILVKIGAKNLELDFAPENLLRSLGAIMQNFPVMSGLFLYGVSFILWIK 70

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           V+    +  A   V+   I I    S +++ E   +   +G + V++G+  IS
Sbjct: 71  VLTKTELSYAYPFVSLGYIFIMA-FSVMVFKENISFYRVLGTVLVIVGVIFIS 122


>gi|320531213|ref|ZP_08032198.1| multidrug transporter EmrE domain protein [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320136582|gb|EFW28545.1| multidrug transporter EmrE domain protein [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 157

 Score = 44.6 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 16/112 (14%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W AL   +   V +++ ++ ++  P                        YA++F    + 
Sbjct: 44  WPALGGAIISEVSATLALRQALNQPGFYVVVGSG---------------YALAFILLSLT 88

Query: 63  V-AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           + A   + +A  + ++  + +    S L++ EP   T   GI+ +M G+ L+
Sbjct: 89  LRAGMPLGVAYGLWSAGGVAVTAMASRLLFGEPLTRTMVAGIVLIMAGVLLV 140


>gi|312880806|ref|ZP_07740606.1| small multidrug resistance protein [Aminomonas paucivorans DSM
           12260]
 gi|310784097|gb|EFQ24495.1| small multidrug resistance protein [Aminomonas paucivorans DSM
           12260]
          Length = 115

 Score = 44.6 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M    +LA + L VL++ F+KM +                      LG   Y ++F TY 
Sbjct: 1   MTLAIILATLVLNVLANSFVKMGMTGFAGGVGGGMVMYMIRSPYMVLGVGCYGLAFVTYS 60

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
            ++    + +A  ++T  I +    ++   + E       +GI  V+ GI L++
Sbjct: 61  ALLTRMDLSVAYPLMTGCIAVTLAAVAVACFGESLTLWQMLGIFLVVAGIWLLA 114


>gi|116329094|ref|YP_798814.1| cation transporter protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330296|ref|YP_800014.1| cation transporter protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121838|gb|ABJ79881.1| Cation transporter protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123985|gb|ABJ75256.1| Cation transporter protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 128

 Score = 44.2 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 3/116 (2%)

Query: 4   IALLANVALGVLSSVFIKMSIIP--PEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           I     +A   L++V IK S +    E         +     +F  G   + ++   Y  
Sbjct: 7   IVFTVALAFNALANVLIKASSLNDVSEKTVGLGAILQVVFNPIFIGGLVSFGLALLGYRF 66

Query: 62  VVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           V+     + +A  V TSA  II   +SS+++ E   W   +GI  ++ G+ L + +
Sbjct: 67  VLGKGLKLSLAYPVFTSAGFIIVLIVSSIVFKERLTWPQWVGIFLILAGVWLCAAN 122


>gi|295697674|ref|YP_003590912.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
           DSM 2912]
 gi|295413276|gb|ADG07768.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
           DSM 2912]
          Length = 144

 Score = 43.8 bits (102), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 28/142 (19%)

Query: 1   MKWIALLANVALGVLSSVFIKMS----------------------------IIPPEAPPH 32
           MKW+AL   +    L++V +K +                              P  +   
Sbjct: 1   MKWLALGLGIVFNALANVLMKAAAQHGGVLGGASGMSGASPGLGQAAGGGAAGPWGSGGL 60

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
                          G   + ++   Y   +  F + +A  ++TS  +++    S +++ 
Sbjct: 61  IGAVLSVVTNVYLLAGIVSFVLALGAYTFALTRFQLSVAYPMMTSLGLVLVALASLVVFR 120

Query: 93  EPFYWTTAIGIMFVMIGITLIS 114
           EPF W+  +G + ++ G+  ++
Sbjct: 121 EPFTWSKTVGTLLILAGVIFVA 142


>gi|219669746|ref|YP_002460181.1| transporter protein [Desulfitobacterium hafniense DCB-2]
 gi|219540006|gb|ACL21745.1| transporter protein [Desulfitobacterium hafniense DCB-2]
          Length = 118

 Score = 43.8 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSD----GKLFWLGFFFYAISFFTYIM 61
           ++ +V LG    + +K+     E      +  R             G F Y +SF  +I 
Sbjct: 5   IIISVILGAFGQILVKIGAKNLELDFAPENLLRSLGAIMQNFPVMSGLFLYGVSFILWIK 64

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           V+    +  A   V+   I I    S +++ E   +   +G + V++G+  IS
Sbjct: 65  VLTKTELSYAYPFVSLGYIFIMA-FSVMVFKENISFYRVLGTVLVIVGVIFIS 116


>gi|156740195|ref|YP_001430324.1| small multidrug resistance protein [Roseiflexus castenholzii DSM
           13941]
 gi|156231523|gb|ABU56306.1| small multidrug resistance protein [Roseiflexus castenholzii DSM
           13941]
          Length = 111

 Score = 43.0 bits (100), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      L    Y  SF+   + +    + +A  + +         +  L+W E    
Sbjct: 28  GFTRLMPTLLVIAGYGASFYLMSLSLRTIPLGVAYAIWSGLGTAAIAVIGVLVWREQLNI 87

Query: 98  TTAIGIMFVMIGITLIS 114
           T  IGI+ ++ G+ L++
Sbjct: 88  TGVIGIVLIIAGVVLLN 104


>gi|110932077|gb|ABH03000.1| SpaO [Spirochaeta aurantia]
          Length = 122

 Score = 42.7 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADS-----TRFSDGKLFWLGFFFYAIS 55
           M    +L++V L  L+ +F+K+ +                  +       W GF  Y +S
Sbjct: 1   MNIFLILSSVLLNALAQIFLKVGMRAIGDVFAGKQDWGRLLVQAVGNPFLWAGFVSYGLS 60

Query: 56  FFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
              ++ V++   V  A   ++   I+    L   ++ E   W   +G+  +++GI LIS
Sbjct: 61  IALWLAVLSRVEVSKAYPFLSVGYIVTL-FLGYFLFSESLTWEKVLGVAVILVGILLIS 118


>gi|84394200|ref|ZP_00992930.1| multidrug efflux transporter [Vibrio splendidus 12B01]
 gi|84375182|gb|EAP92099.1| multidrug efflux transporter [Vibrio splendidus 12B01]
          Length = 142

 Score = 42.3 bits (98), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  L+  V    LS V +K             D    S      L    +  +F    
Sbjct: 33  MSWFFLMMGVMAEALSHVALKA-----------TDGFSLSKPIPALLVISGHLAAFLFLS 81

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +  ++     I+  + +S+ ++ +       IG++FV  G+ +I+ 
Sbjct: 82  QAMKGMPVGVVHSLWAGLAIVTVSLISTFVYRQHLDTMVWIGMLFVAAGVVMINL 136


>gi|301108179|ref|XP_002903171.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262097543|gb|EEY55595.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 380

 Score = 41.1 bits (95), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 1/112 (0%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV 63
           I  +       +     K S +         D   +    L+ +G F          + +
Sbjct: 19  ILTVVGSICTNMGVNLQKFSFMREAKGRSVGDKRGYFRQPLWVIGLFLVVGGSILDFVAL 78

Query: 64  AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
                 +A  V  S ++      +SL+  E F  + AIG   V++GI +++ 
Sbjct: 79  GFMPQSLATPVGGSTMVANVA-FASLLLKEKFTKSDAIGTALVLLGIIVVAI 129


>gi|183222259|ref|YP_001840255.1| putative transporter [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912311|ref|YP_001963866.1| cation transporter protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776987|gb|ABZ95288.1| Cation transporter protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780681|gb|ABZ98979.1| Putative transporter; putative membrane protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 129

 Score = 40.7 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPP---HFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           +     V    L+++ IK S +  +       F +         F  G   + ++   Y 
Sbjct: 7   LFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGLALLGYR 66

Query: 61  MVVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            V+     + +A  V TS+  II    SS+ + E   +T  +GI F+++G+ L +  
Sbjct: 67  YVLGKGLKLSLAYPVFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLTALQ 123


>gi|302337203|ref|YP_003802409.1| protein of unknown function DUF6 transmembrane [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634388|gb|ADK79815.1| protein of unknown function DUF6 transmembrane [Spirochaeta
           smaragdinae DSM 11293]
          Length = 119

 Score = 40.7 bits (94), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 42  GKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAI 101
               W G   + I F  Y +++    + +   +VTS  +I  T LS  +  EP      +
Sbjct: 46  NPFIWTGGICFVIGFLLYSVILQKAELSMVYPIVTSGSLIAITLLSLFVLHEPITLMDFL 105

Query: 102 GIMFVMIGITLI 113
           G  F+++GI LI
Sbjct: 106 GFGFILLGIGLI 117


>gi|270289929|ref|ZP_06196155.1| small multidrug resistance protein [Pediococcus acidilactici 7_4]
 gi|304385822|ref|ZP_07368166.1| DMT superfamily multidrug transporter EmrE [Pediococcus
           acidilactici DSM 20284]
 gi|270281466|gb|EFA27298.1| small multidrug resistance protein [Pediococcus acidilactici 7_4]
 gi|304328326|gb|EFL95548.1| DMT superfamily multidrug transporter EmrE [Pediococcus
           acidilactici DSM 20284]
          Length = 106

 Score = 40.0 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y I F+ + + +   ++ IA  V     I++   ++ L W EP      +GI F+++G+ 
Sbjct: 39  YGICFYFFSLSLKTINLNIAYAVWAGIGILLTAVIAFLFWKEPINLGNILGIFFIIVGVV 98

Query: 112 LISFH 116
           ++SF+
Sbjct: 99  ILSFY 103


>gi|261249988|ref|ZP_05942565.1| multidrug efflux transporter [Vibrio orientalis CIP 102891]
 gi|260939492|gb|EEX95477.1| multidrug efflux transporter [Vibrio orientalis CIP 102891]
          Length = 110

 Score = 40.0 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ LL  V    LS V +K             D    S      L    +  +F    
Sbjct: 1   MSWLFLLMGVMAEALSHVALKA-----------TDGFSLSKPVPAALVIAGHLAAFLFLG 49

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V I  ++     I+  + +S+ ++ +    T  IG++ +  G+ LI+ 
Sbjct: 50  QAMKDLPVGIVHSLWAGLAIVTVSLISTFVYRQHLDTTVWIGMLMIAGGVVLINL 104


>gi|320531212|ref|ZP_08032197.1| putative multidrug transporter EmrE [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136581|gb|EFW28544.1| putative multidrug transporter EmrE [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 107

 Score = 40.0 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 22  MSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFTYIMVVAH-FSVRIAQTVVTSA 78
           ++ I  E     +         L W G     Y  +F    + +     + +A  + ++ 
Sbjct: 7   VAAIASETTGTLSLKLASDGKGLRWYGVVMVGYLAAFAMLTLALTEGLPLGVAYGIWSAG 66

Query: 79  IIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            + +    S L++ EP   T   GI+ +M G+ L+
Sbjct: 67  GVAVTAIASRLLFSEPLTRTMVAGIVLIMAGVLLV 101


>gi|109897759|ref|YP_661014.1| small multidrug resistance protein [Pseudoalteromonas atlantica
           T6c]
 gi|109700040|gb|ABG39960.1| small multidrug resistance protein [Pseudoalteromonas atlantica
           T6c]
          Length = 108

 Score = 40.0 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L+  V    +S V +K             ++  F+      L    +  +F    
Sbjct: 1   MSWVFLMLGVVAEAMSHVALK-------------ETDGFTKPLPSVLVLLGHVAAFMFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    + I   +     I+  T LS++I+ +    TT +G+ FV +G+ +I+ 
Sbjct: 48  QAMKGMPIGIVHALWAGLAIVTVTLLSTVIYRQHLDLTTWVGMAFVAVGVAMINL 102


>gi|16519871|ref|NP_443991.1| conserved hypothetical 12.3 kDa membrane protein [Sinorhizobium
           fredii NGR234]
 gi|2496716|sp|P55580|Y4NH_RHISN RecName: Full=Uncharacterized protein y4nH
 gi|2182543|gb|AAB91787.1| conserved hypothetical 12.3 kDa membrane protein [Sinorhizobium
           fredii NGR234]
          Length = 117

 Score = 40.0 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
           F  G  FY I+   +   +    V +A  ++  +   +    S   + EPF+    IG+ 
Sbjct: 45  FVGGVVFYGINVLLFAKALDSLEVSVAYPILAGSGFAMLIIASHYFFGEPFHLHKWIGVA 104

Query: 105 FVMIGITLIS 114
            V++GI  ++
Sbjct: 105 LVLVGIIFLA 114


>gi|332976396|gb|EGK13246.1| DMT superfamily drug/metabolite transporter [Desmospora sp. 8437]
          Length = 146

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L+  +   V  ++ +K+S               F+          FY ++F    
Sbjct: 22  MHWVYLIFAILFEVAGTMSMKLSH-------------GFTKLWPSLGMVVFYILAFAGLT 68

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           + +    V +A  V +     +   L  LI+ E   W  A  I+ +++G+
Sbjct: 69  LSLKQMPVSLAYAVWSGLGTAVIAVLGYLIFQESMTWLKASSILLIVLGV 118


>gi|157374059|ref|YP_001472659.1| hypothetical protein Ssed_0920 [Shewanella sediminis HAW-EB3]
 gi|257096138|sp|A8FRQ8|ARNF_SHESH RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnF; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnF; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnF
 gi|157316433|gb|ABV35531.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 145

 Score = 39.6 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMFV 106
           G F YA+S   ++M +    + IA  +++ + +++      L W +EP  W    GI  +
Sbjct: 68  GLFCYALSMACWVMALKRLPLSIAYPLLSLSYVLVYLGAVYLPWLNEPLSWVKGTGIFLI 127

Query: 107 MIGITLI 113
           ++G+  +
Sbjct: 128 LLGLIFV 134


>gi|296536574|ref|ZP_06898656.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296263098|gb|EFH09641.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 110

 Score = 39.6 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           + W+ L A +   ++  V +K   +   +                 +G   Y  +   YI
Sbjct: 2   LHWLVLAAAITTSLVGQVLLKAGTLGEGSF------LTQLFRWQTIIGLGCYGGAAMLYI 55

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           + +    + +A    T+A  +I   +   ++ E         I  + +G+ L++
Sbjct: 56  VALRKIPMSVALPC-TAASYVIIALIGHFMFGEALGPQKVAAIGLISLGVALLA 108


>gi|269138650|ref|YP_003295351.1| hypothetical protein ETAE_1297 [Edwardsiella tarda EIB202]
 gi|267984311|gb|ACY84140.1| hypothetical protein ETAE_1297 [Edwardsiella tarda EIB202]
 gi|304558661|gb|ADM41325.1| Polymyxin resistance protein PmrM [Edwardsiella tarda FL6-60]
          Length = 127

 Score = 39.2 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWL--GFFFYAISFFT 58
           M ++  LA+VAL   + + ++ +++          +   ++  ++WL  G   Y +S   
Sbjct: 2   MGYLWALASVALVSAAQLMMRYTMMHCSDGAQLISALLSAEHWVWWLPGGILCYGLSMLC 61

Query: 59  YIMVVAHFSVRIAQTVVTSAIIIIATCLSSL-IWDEPFYWTTAIGIMFVMIGITLI 113
           ++  +    +  A  +++ + +++     SL ++ E       +G+  +++G+ +I
Sbjct: 62  WLFALRDLPLNRAYPLLSLSYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVI 117


>gi|295401793|ref|ZP_06811758.1| small multidrug resistance protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112224|ref|YP_003990540.1| small multidrug resistance protein [Geobacillus sp. Y4.1MC1]
 gi|294976160|gb|EFG51773.1| small multidrug resistance protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217325|gb|ADP75929.1| small multidrug resistance protein [Geobacillus sp. Y4.1MC1]
          Length = 115

 Score = 39.2 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y +SF+   + +    + +A  + +     + T +  L+W +PF   T +G++ ++ G+ 
Sbjct: 40  YGLSFYFLSLCLKTVPLSLAYALWSGIGTALTTLIGVLLWRDPFNIITLVGLILIIGGVA 99

Query: 112 LISF 115
           L++ 
Sbjct: 100 LLNA 103


>gi|138896721|ref|YP_001127174.1| hypothetical protein GTNG_3084 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268234|gb|ABO68429.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 122

 Score = 39.2 bits (90), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+ +  N  L V      K  +   +         +        LG   Y  +   ++ +
Sbjct: 6   WLWIGLNTVLLVTGQFLWKYGMTRQKFELDVISVIKLLLSPWILLGLVVYGAATILWLFI 65

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           ++   + +A   + S   ++A   +   + EP      IG++ +M+G++ I F
Sbjct: 66  LSRVPLSVAYP-LQSFAYVLAVFGAYAFFHEPLSVPKIIGVILIMLGVSFIGF 117


>gi|304405307|ref|ZP_07386966.1| protein of unknown function DUF6 transmembrane [Paenibacillus
           curdlanolyticus YK9]
 gi|304345346|gb|EFM11181.1| protein of unknown function DUF6 transmembrane [Paenibacillus
           curdlanolyticus YK9]
          Length = 114

 Score = 39.2 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
            W G   Y ++   +  V+    + +A   + S   ++    +  I+DE    T  +G  
Sbjct: 45  IWSGLTLYGLATLLWFAVLTRLPLSVAYP-MQSTAYVLGLLAAWFIFDESLSATKLVGCA 103

Query: 105 FVMIGITLIS 114
            +++G+ LI+
Sbjct: 104 VILVGVYLIA 113


>gi|116492714|ref|YP_804449.1| membrane transporter [Pediococcus pentosaceus ATCC 25745]
 gi|116102864|gb|ABJ68007.1| Membrane transporter of cations and cationic drugs [Pediococcus
           pentosaceus ATCC 25745]
          Length = 108

 Score = 39.2 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 38/78 (48%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      +    Y  +F+   +VV +  + IA  + +   II+ T +S  ++  P   
Sbjct: 26  GFTKLLPTLISLLSYGFAFYFLSLVVKNIPINIAYAIWSGVGIILMTVISVFVFHNPINV 85

Query: 98  TTAIGIMFVMIGITLISF 115
            T +GI+F+ +G+ L++ 
Sbjct: 86  PTVLGILFITLGVILVNL 103


>gi|153954075|ref|YP_001394840.1| transporter protein [Clostridium kluyveri DSM 555]
 gi|219854688|ref|YP_002471810.1| hypothetical protein CKR_1345 [Clostridium kluyveri NBRC 12016]
 gi|146346956|gb|EDK33492.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
 gi|219568412|dbj|BAH06396.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 118

 Score = 39.2 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 5/114 (4%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPH----FADSTRFSDGKLFWLGFFFYAISFFTYI 60
            +L +V LG +  V +K   +  E                      LG   Y +SF  +I
Sbjct: 4   LILISVFLGAMGQVLVKYGAVNLELNFTIKYLLPSIFNILKNMPVMLGIISYGLSFLIWI 63

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
            V++   +  A  +V+   +I     S  ++ E       +G++F+++G+ L+S
Sbjct: 64  KVLSKVELSYAYPMVSLGYVITM-MFSYFVFKENISLIRILGVVFIILGVVLVS 116


>gi|300854519|ref|YP_003779503.1| hypothetical protein CLJU_c13330 [Clostridium ljungdahlii DSM
           13528]
 gi|300434634|gb|ADK14401.1| predicted membrane protein [Clostridium ljungdahlii DSM 13528]
          Length = 118

 Score = 38.8 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                     LG   Y +SF  +I V++   +  A  +V+   II     S  ++ E   
Sbjct: 40  LSILKNLPVMLGIISYGLSFLLWIKVLSKVELSYAYPMVSLGYIITM-VFSYFMFKENIS 98

Query: 97  WTTAIGIMFVMIGITLIS 114
           +   +G+ F+M+G+ L+S
Sbjct: 99  FIRILGVAFIMLGVILVS 116


>gi|89095990|ref|ZP_01168883.1| multidrug resistance protein [Bacillus sp. NRRL B-14911]
 gi|89088844|gb|EAR67952.1| multidrug resistance protein [Bacillus sp. NRRL B-14911]
          Length = 123

 Score = 38.8 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+         F + ++FF   + +    + IA  + +         +  LIW E    
Sbjct: 26  GFTKIWPALGVLFGFGVAFFALSLSLKTIPLSIAYAIWSGIGTAATAVIGILIWKEKLNM 85

Query: 98  TTAIGIMFVMIGITLIS 114
            +A GI+ +++G+ L++
Sbjct: 86  LSAAGIILIILGVVLLN 102


>gi|323344753|ref|ZP_08084977.1| DMT superfamily drug/metabolite transporter [Prevotella oralis ATCC
           33269]
 gi|323094023|gb|EFZ36600.1| DMT superfamily drug/metabolite transporter [Prevotella oralis ATCC
           33269]
          Length = 131

 Score = 38.8 bits (89), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 44/114 (38%), Gaps = 13/114 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L   + L V  S  +K+S               FS           Y   F+   
Sbjct: 23  MHYLFLALAIILEVCGSTLMKLSD-------------GFSRLLPTAGTIIAYIACFYFLS 69

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           + +    + +A  +  +  +++   +S   + +PF W   IGI  ++ G+ +++
Sbjct: 70  LALKSIHLGVAYAIWAALGLVLTNVVSVAFFKQPFDWAAGIGITLIIAGVVILN 123


>gi|330897440|gb|EGH28859.1| hypothetical protein PSYJA_07748 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 114

 Score = 38.8 bits (89), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L +   L  L  +  K ++        F  +         WL           ++
Sbjct: 1   MTWLMLASACLLTCLGQIVQKYAVQDWRG--AFPGAFAALRSMWRWLALACLGSGLLVWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +V+    V IA  ++    + + T     ++DEP      +GI  +++G+ 
Sbjct: 59  LVLQRLDVGIAYPMLGVNFV-LITLAGRYLFDEPVDAQHWLGIALILVGVF 108


>gi|312111384|ref|YP_003989700.1| small multidrug resistance protein [Geobacillus sp. Y4.1MC1]
 gi|311216485|gb|ADP75089.1| small multidrug resistance protein [Geobacillus sp. Y4.1MC1]
          Length = 126

 Score = 38.4 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  LL  +   VL +  +KMS               F+      L F FY  S     
Sbjct: 1   MSWFFLLLGIVSEVLGTTSMKMSE-------------GFTKLIPSILMFIFYGTSLTLVT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + +    V IA ++ +     I   +  L + E F     + I+ +++G+ +++ 
Sbjct: 48  LALKEIEVSIAYSIWSGLGTAIIATIGILFFKEHFSLFKMLAILMIIVGVIMLNI 102


>gi|226315326|ref|YP_002775222.1| hypothetical protein BBR47_57410 [Brevibacillus brevis NBRC 100599]
 gi|226098276|dbj|BAH46718.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 122

 Score = 38.4 bits (88), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
             +       +G   Y +S F +I  +    +  A  +     + +   LS LI++EP  
Sbjct: 44  LHYFTNLPIMVGLALYGLSAFIWIAALEKVQLSYAYPMAALGYV-LVAVLSFLIFNEPLS 102

Query: 97  WTTAIGIM 104
            T   G+ 
Sbjct: 103 LTRIAGLA 110


>gi|326773869|ref|ZP_08233151.1| EmrE protein [Actinomyces viscosus C505]
 gi|326636008|gb|EGE36912.1| EmrE protein [Actinomyces viscosus C505]
          Length = 107

 Score = 38.4 bits (88), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 17  SVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFTYIMVVAH-FSVRIAQT 73
           S    ++ I  E     +         L W G     Y  +F    + +    ++ +A  
Sbjct: 2   SGLYLVAAIASETTGTLSLKLASDGRGLRWYGLVMAGYLGAFALLTLALKEGLALGVAYG 61

Query: 74  VVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           + ++  + +    S  ++ EP   T  +GI  +M G+ L+
Sbjct: 62  IWSAGGVAVTAIASRFLFGEPLTRTMVVGIALIMAGVLLV 101


>gi|330941478|gb|EGH44288.1| hypothetical protein PSYPI_18616 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 114

 Score = 38.0 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L +   L  L  +  K ++        F  +         WL           ++
Sbjct: 1   MTWLMLASACLLTCLGQIAQKCAVQDWRG--AFPGAFAALRSMWLWLALACLGSGLLVWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +V+    V IA  ++    + + T     ++DEP      +GI  +++G+ 
Sbjct: 59  LVLQRLDVGIAYPMLGVNFV-LITLAGRYVFDEPVDAQHWLGIALILVGVF 108


>gi|254420988|ref|ZP_05034712.1| multidrug resistance protein, SMR family [Brevundimonas sp. BAL3]
 gi|196187165|gb|EDX82141.1| multidrug resistance protein, SMR family [Brevundimonas sp. BAL3]
          Length = 112

 Score = 38.0 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 33/83 (39%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S +F+           Y ++F+   + +    V IA  + +   ++  + +  + + 
Sbjct: 23  LQQSQQFTRVWPTAGMAVCYGLAFYLLSVALKQMPVGIAYAIWSGLGVVAISVIGVVAFR 82

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +   W    G+  ++ G+ +I+ 
Sbjct: 83  QRLDWPAIAGLAMIIGGVVVINL 105


>gi|311898957|dbj|BAJ31365.1| putative multidrug resistance protein [Kitasatospora setae KM-6054]
          Length = 106

 Score = 38.0 bits (87), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L   +A  V ++  +K++       P  A +               Y +SF    
Sbjct: 1   MPYVLLGLAIASEVCATSLLKLTDGFSRLWPSLAVAAG-------------YVLSFALLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             + H  V +A  V + A       + ++ + EP       GI+ V+ G+ L++  
Sbjct: 48  RALKHLPVSVAYAVWSGAGTAAVAAIGAVFFGEPLGRPQWCGIVLVIAGVVLLNLR 103


>gi|325067921|ref|ZP_08126594.1| multidrug efflux transporter [Actinomyces oris K20]
          Length = 107

 Score = 38.0 bits (87), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 17  SVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFTYIMVVAH-FSVRIAQT 73
           S    ++ I  E     +         L W G     Y  +F    + +    ++ +A  
Sbjct: 2   SGLYLVAAIASETTGTLSLKLASDGRGLRWYGLVMAGYLAAFAMLTLALKEGMALGVAYG 61

Query: 74  VVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           + ++  + +    S L++ EP   T   GI  +M G+ L+
Sbjct: 62  IWSAGGVAVTAIASRLLFGEPLTRTMVAGIALIMAGVLLV 101


>gi|332880822|ref|ZP_08448493.1| multidrug transporter EmrE [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681205|gb|EGJ54131.1| multidrug transporter EmrE [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 111

 Score = 38.0 bits (87), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S +F+      +    YA +F+   +V+ H  V IA  + +   I++   +   ++ 
Sbjct: 22  LKQSEQFTKFWPSVVTVAGYAAAFYCLSLVLKHIPVGIAYAIWSGVGIVLIAVIGFTVFK 81

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +   W   +G+  ++ G+ +I+ 
Sbjct: 82  QHLDWPAVLGLALIIAGVVVINV 104


>gi|30263262|ref|NP_845639.1| SMR family multidrug efflux pump [Bacillus anthracis str. Ames]
 gi|47528637|ref|YP_019986.1| SMR family multidrug efflux pump [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186112|ref|YP_029364.1| SMR family multidrug efflux pump [Bacillus anthracis str. Sterne]
 gi|65320593|ref|ZP_00393552.1| COG2076: Membrane transporters of cations and cationic drugs
           [Bacillus anthracis str. A2012]
 gi|165868641|ref|ZP_02213301.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0488]
 gi|167631843|ref|ZP_02390170.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0442]
 gi|167637128|ref|ZP_02395408.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0193]
 gi|170684809|ref|ZP_02876034.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0465]
 gi|170705117|ref|ZP_02895582.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0389]
 gi|177650281|ref|ZP_02933282.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0174]
 gi|190564764|ref|ZP_03017685.1| multidrug resistance protein, Smr family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813867|ref|YP_002813876.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           CDC 684]
 gi|229600267|ref|YP_002867522.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0248]
 gi|254685876|ref|ZP_05149735.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723280|ref|ZP_05185068.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A1055]
 gi|254738347|ref|ZP_05196050.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Western North America USA6153]
 gi|254742487|ref|ZP_05200172.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Kruger B]
 gi|254752663|ref|ZP_05204699.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Vollum]
 gi|254761178|ref|ZP_05213202.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Australia 94]
 gi|30257896|gb|AAP27125.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Ames]
 gi|47503785|gb|AAT32461.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49180039|gb|AAT55415.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           Sterne]
 gi|164715367|gb|EDR20884.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0488]
 gi|167514635|gb|EDR90001.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0193]
 gi|167532141|gb|EDR94777.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0442]
 gi|170129972|gb|EDS98834.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0389]
 gi|170671069|gb|EDT21807.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0465]
 gi|172084233|gb|EDT69292.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0174]
 gi|190564081|gb|EDV18045.1| multidrug resistance protein, Smr family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227002807|gb|ACP12550.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           CDC 684]
 gi|229264675|gb|ACQ46312.1| multidrug resistance protein, Smr family [Bacillus anthracis str.
           A0248]
          Length = 120

 Score = 38.0 bits (87), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  IK+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAIKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKIVAILFILIGVVILNFNS 104


>gi|186681723|ref|YP_001864919.1| small multidrug resistance protein [Nostoc punctiforme PCC 73102]
 gi|186464175|gb|ACC79976.1| small multidrug resistance protein [Nostoc punctiforme PCC 73102]
          Length = 123

 Score = 38.0 bits (87), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 3/116 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           + W+ +  +     L ++ IK S +       F           F  G   Y I    + 
Sbjct: 11  LPWLIVTMSAFCNCLGNILIKQSRLASNNSTSF---IVTITSPWFIAGLIAYCIGLLLFA 67

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
             +    + I          I+   +S  ++ E   +   I +  +  GI +I++ 
Sbjct: 68  KALDKLPISIVVPTSQGIGFILVNFISYWLFKESLTFNQIIAVSLIFAGIVVIAYQ 123


>gi|327396448|dbj|BAK13869.1| hypothetical UPF0188 membrane protein YPO2416/y1923/YP2203, YfbJ
           [Pantoea ananatis AJ13355]
          Length = 143

 Score = 37.6 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 52/116 (44%), Gaps = 13/116 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWL-------GFFFYAIS 55
           ++  L +V L  L+ + ++ ++      P        +   L+WL       G   YA S
Sbjct: 22  YLLALCSVLLVTLAQLMLRWAM---HQLPAL--PMLITQYALYWLPLLVLCGGLTAYACS 76

Query: 56  FFTYIMVVAHFSVRIAQTVVTSAIIII-ATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
             ++ + + H  +  A  +++ + +++    +S  ++ EPF+     G+  +++G+
Sbjct: 77  MVSWFLALRHLPLSRAYPLLSISYVLVWLLAISLPLFAEPFHAGAMAGVFLILVGL 132


>gi|330954152|gb|EGH54412.1| hypothetical protein PSYCIT7_22846 [Pseudomonas syringae Cit 7]
          Length = 114

 Score = 37.6 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 3/111 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L     L  L  +  K ++        F  +         WL           ++
Sbjct: 1   MTWLMLACACLLTCLGQIAQKYAVQDWRG--AFPGAFTALRSIWLWLAVACLGAGLLIWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +V+    V IA  ++    + + T     ++DEP      +GI  +++G+ 
Sbjct: 59  LVLQRLDVGIAYPMLGLNFV-LITLAGRYLFDEPVDAQHWLGIALILVGVF 108


>gi|330998185|ref|ZP_08322011.1| multidrug efflux protein [Paraprevotella xylaniphila YIT 11841]
 gi|329568877|gb|EGG50675.1| multidrug efflux protein [Paraprevotella xylaniphila YIT 11841]
          Length = 111

 Score = 37.6 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 34/73 (46%)

Query: 43  KLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIG 102
               +    YA +F+   +V+ H  V IA  + +   I++   + S ++ +   W   +G
Sbjct: 32  WPSVVTVVGYAAAFYCLSLVLKHIPVGIAYAIWSGVGIVLIAVIGSTVFKQHLDWPAVLG 91

Query: 103 IMFVMIGITLISF 115
           +  ++ G+ +I+ 
Sbjct: 92  LALIIAGVVVINV 104


>gi|116623639|ref|YP_825795.1| hypothetical protein Acid_4551 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226801|gb|ABJ85510.1| hypothetical protein Acid_4551 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 123

 Score = 37.6 bits (86), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 6/103 (5%)

Query: 11  ALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRI 70
            LG  + + IK  +                       G+  Y ++    ++ +    +  
Sbjct: 21  LLGAAAQLLIKHGMDH-----LVMQPMAVLTNLPLVAGYGLYGLNTIMLVLALRDGELSQ 75

Query: 71  AQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
              ++ +   +  T LS  I  E   W   IGI  +++G+ +I
Sbjct: 76  LYPII-AMTYVWVTLLSYTILKETPNWYKNIGIATIVLGVAVI 117


>gi|148259995|ref|YP_001234122.1| small multidrug resistance protein [Acidiphilium cryptum JF-5]
 gi|146401676|gb|ABQ30203.1| small multidrug resistance protein [Acidiphilium cryptum JF-5]
          Length = 291

 Score = 37.6 bits (86), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 32/69 (46%)

Query: 49  FFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMI 108
             FYA +F+   ++V    + +   + + A I++ + +  L + +     T  GI  +  
Sbjct: 218 LMFYAAAFYLLAIIVRTMPIGVVYAIWSGAGIVLISAVGWLRFGQSLSPATMFGIAVIAA 277

Query: 109 GITLISFHT 117
           G+ +++  +
Sbjct: 278 GVVIVNLSS 286


>gi|284052153|ref|ZP_06382363.1| hypothetical protein AplaP_11856 [Arthrospira platensis str.
           Paraca]
 gi|291568223|dbj|BAI90495.1| small multidrug resistance family protein [Arthrospira platensis
           NIES-39]
          Length = 116

 Score = 37.6 bits (86), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 4/112 (3%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W  L+       + S+ +K S +    P              F  G   Y ++   +   
Sbjct: 8   WGFLILAAINNCVGSLLLKKSRLVATDPSLLT----LLLSPWFIGGIMVYGVNVILFAKA 63

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +    V  A  +       +     +L++ E F +   IG+  +  GI ++S
Sbjct: 64  LDQLPVSTAYPIFAGISFTLIAIAGNLLFGERFDFNQWIGLSLIFTGIIIMS 115


>gi|289671640|ref|ZP_06492530.1| hypothetical protein PsyrpsF_00275 [Pseudomonas syringae pv.
           syringae FF5]
 gi|330982309|gb|EGH80412.1| hypothetical protein PSYAP_27746 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 114

 Score = 37.6 bits (86), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L +   L  L  +  K ++        F  +         WL           ++
Sbjct: 1   MTWLMLASACLLTCLGQIAQKYAVQDWRG--AFPGAFAALRSIWLWLALACLGSGLLVWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +V+    V IA  ++    + + T     +++EP      +GI  +++G+ 
Sbjct: 59  LVLQRLDVGIAYPMLGVNFV-LITLAGRYVFNEPVDAQHWLGIALILVGVF 108


>gi|290475531|ref|YP_003468419.1| hypothetical protein XBJ1_2529 [Xenorhabdus bovienii SS-2004]
 gi|289174852|emb|CBJ81653.1| putative membrane protein [Xenorhabdus bovienii SS-2004]
          Length = 128

 Score = 37.6 bits (86), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMFV 106
           G   YA+S   ++ V+ +  +  A  +++ + + +    + L W +E   W    G++F+
Sbjct: 56  GLAGYALSMLCWLFVLQYLPLNKAYPMISLSYVFVYLMAALLPWFNETLSWLKTAGVLFI 115

Query: 107 MIGITLIS 114
           ++G+ LIS
Sbjct: 116 LLGVWLIS 123


>gi|77459071|ref|YP_348577.1| hypothetical protein Pfl01_2846 [Pseudomonas fluorescens Pf0-1]
 gi|123772182|sp|Q3KCB8|ARNE_PSEPF RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnE; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnE; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnE
 gi|77383074|gb|ABA74587.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 114

 Score = 37.6 bits (86), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
            WL  F        +++V+    V +A  +++   +II T ++  ++ EP       G++
Sbjct: 43  LWLALFALGSGLLVWLLVLQRLPVSVAYPMLSLNFVII-TLIARFVFKEPVDVQHWFGVL 101

Query: 105 FVMIGITLI 113
            V+ G+ L+
Sbjct: 102 LVIGGVALL 110


>gi|326773868|ref|ZP_08233150.1| quaternary ammonium compound-resistance protein [Actinomyces
           viscosus C505]
 gi|326636007|gb|EGE36911.1| quaternary ammonium compound-resistance protein [Actinomyces
           viscosus C505]
          Length = 133

 Score = 37.6 bits (86), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 52  YAISFFTYIMVV-AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           YA++F    + + A   + +A  +  +  + +   LS L++ EP     A+GI  +M G+
Sbjct: 54  YALAFILLSLTLKAGMPLGVAYGLWGALGVALTAVLSMLVFGEPITVLVALGIALIMAGV 113

Query: 111 TLISF 115
            L+  
Sbjct: 114 LLVEV 118


>gi|86144988|ref|ZP_01063320.1| multidrug efflux transporter [Vibrio sp. MED222]
 gi|85837887|gb|EAQ55999.1| multidrug efflux transporter [Vibrio sp. MED222]
          Length = 110

 Score = 37.6 bits (86), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  L+  V    LS V +K             D    S      L    +  +F    
Sbjct: 1   MSWFFLMMGVMAEALSHVALKA-----------TDGFSLSKPIPALLVISGHLAAFLFLS 49

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +  ++     I+  + +S+ ++ +       IG++FV  G+ +I+ 
Sbjct: 50  QAMKGMPVGVVHSLWAGLAIVTVSLISTFVYRQHLDTMVWIGMLFVAAGVVMINL 104


>gi|218677070|ref|YP_002395889.1| putative multidrug efflux transporter [Vibrio splendidus LGP32]
 gi|218325338|emb|CAV27387.1| putative multidrug efflux transporter [Vibrio splendidus LGP32]
          Length = 110

 Score = 37.6 bits (86), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  L+  V    LS V +K             D    S      L    +  +F    
Sbjct: 1   MSWFFLMMGVMAEALSHVALKA-----------TDGFSLSKPIPALLVISGHLAAFLFLS 49

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +  ++     I+  + +S+ ++ +       +G++FV  G+ +I+ 
Sbjct: 50  QAMKGMPVGVVHSLWAGLAIVTVSLISTFVYRQHLDTMVWVGMLFVAAGVVMINL 104


>gi|118472281|ref|YP_887973.1| transporter small multidrug resistance (SMR) family protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118173568|gb|ABK74464.1| transporter, small multidrug resistance (SMR) family protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 111

 Score = 37.3 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 36  STRFSDGKLFWLG--FFFYAISFFTYIMVV-AHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
           S R S     WL      Y  +F    +V+ A   V +A  +  +        L++L++ 
Sbjct: 20  SLRASQDHALWLVPVVAGYVAAFVLLTLVLRAGMPVGVAYGIWGALGTASTAVLAALLFG 79

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +PF W    GI  ++ G+ L+ F
Sbjct: 80  DPFTWPIVAGIGLIIAGVLLVEF 102


>gi|134301118|ref|YP_001114614.1| small multidrug resistance protein [Desulfotomaculum reducens MI-1]
 gi|134053818|gb|ABO51789.1| small multidrug resistance protein [Desulfotomaculum reducens MI-1]
          Length = 126

 Score = 37.3 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 13/116 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L+  +   ++ +  +K S    +  P       FS             ++FF   
Sbjct: 1   MAYLYLILAILCELIGTSLLKASAGFSKLFPTLGLLVSFS-------------LAFFFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           + +    + +A  + +    I    +S LIW E     +  GI  +++G+ +++ +
Sbjct: 48  LSLKTIPLNLAYAIWSGLGTIATVIISILIWQERVNIASITGISLIIVGVIILNLY 103


>gi|261344000|ref|ZP_05971645.1| PbgE3 protein [Providencia rustigianii DSM 4541]
 gi|282568391|gb|EFB73926.1| PbgE3 protein [Providencia rustigianii DSM 4541]
          Length = 135

 Score = 37.3 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 39  FSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYW 97
                + ++G   YA+S   ++  + +  +  A  +++ + + +      L W +EP  W
Sbjct: 48  VLSLGIIFIGLVCYALSMLCWLFALKYIPLNKAYPLISLSYVFVYVLAVLLPWFNEPATW 107

Query: 98  TTAIGIMFVMIGITLIS 114
             A GI F++ G+ +IS
Sbjct: 108 IKAAGIAFILFGVWMIS 124


>gi|300865637|ref|ZP_07110410.1| putative Transporter protein [Oscillatoria sp. PCC 6506]
 gi|300336364|emb|CBN55560.1| putative Transporter protein [Oscillatoria sp. PCC 6506]
          Length = 128

 Score = 37.3 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 3   WIALLANVALGVLSSVFIKMS---IIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTY 59
           ++ LLA +  GVL    +K +   + P  A      +   +   L W+G   Y +  F +
Sbjct: 6   FLVLLAAILCGVLGQFSLKGAANILGPIGAANLVEKAIAMASQPLIWVGLILYGLGAFGF 65

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           I+V++  ++ I   +++ + I +      +I++EP      +G+  +M G+  +
Sbjct: 66  IVVLSRANISIVSPLLSISYICVV-LGGKIIFNEPLPPLRLVGVALIMTGVVFV 118


>gi|269216641|ref|ZP_06160495.1| SugE protein [Slackia exigua ATCC 700122]
 gi|269129875|gb|EEZ60958.1| SugE protein [Slackia exigua ATCC 700122]
          Length = 104

 Score = 37.3 bits (85), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y +SF+    V+A   + +   + T   I++   +  +IW E F W   +G+  +++G+ 
Sbjct: 39  YLVSFYLMSHVLAELPLGLTYAIWTGVSIVLTAIVGRIIWKELFTWKKVLGMALIIVGVA 98

Query: 112 LI 113
           L+
Sbjct: 99  LL 100


>gi|224436525|ref|ZP_03657534.1| efflux protein [Helicobacter cinaedi CCUG 18818]
 gi|313143028|ref|ZP_07805221.1| SMR drug efflux transporter [Helicobacter cinaedi CCUG 18818]
 gi|313128059|gb|EFR45676.1| SMR drug efflux transporter [Helicobacter cinaedi CCUG 18818]
          Length = 145

 Score = 37.3 bits (85), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
           F   +    +S++   + +   S+ +A  +     ++   C+    + E   W   +GI 
Sbjct: 37  FIAMYALLVLSYYFMALSLKRLSISVAYALWEVLGVLCVVCIGIFYFGESLKWQEYLGIC 96

Query: 105 FVMIGITLISF 115
             + GI LI+ 
Sbjct: 97  LSLCGIALINI 107


>gi|288573335|ref|ZP_06391692.1| small multidrug resistance protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288569076|gb|EFC90633.1| small multidrug resistance protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 123

 Score = 37.3 bits (85), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/118 (11%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPP---HFADSTRFSDGKLFWLGFFFYAISFF 57
           + ++ +L +       S  +K+                  +        +G   + +SF 
Sbjct: 4   LGFVLILGSALTNAAGSSMMKVGFGRRGDLMDGGALRALFQIVSNPWAIVGVLLFGVSFI 63

Query: 58  TYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
                ++   + +A  ++++ + ++   +S   + E    +  +GI  ++ G+  +S 
Sbjct: 64  FMSAALSRVDLSVAYPLMSAMVYVLVLAVSVFWFGESMGLSKLLGIGAILFGVAALSV 121


>gi|195953638|ref|YP_002121928.1| small multidrug resistance protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933250|gb|ACG57950.1| small multidrug resistance protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 104

 Score = 37.3 bits (85), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%)

Query: 40  SDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTT 99
           S       G   + I F  Y   +   ++ IA  ++  +  +I +  S     E      
Sbjct: 28  SSKLFILAGLLGFGIQFLFYAFALKKINLSIAYPIMVGSGFVIISLFSYFYLKEHMNIYD 87

Query: 100 AIGIMFVMIGITLISFH 116
            +G++ + +G+ LIS  
Sbjct: 88  FVGMVLIFVGVLLISVR 104


>gi|145300202|ref|YP_001143043.1| hypothetical protein ASA_3313 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|257096131|sp|A4SQX3|ARNF_AERS4 RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnF; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnF; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnF
 gi|142852974|gb|ABO91295.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 148

 Score = 37.3 bits (85), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVV-TSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
           G   YA+S   ++  +    + IA  ++ TS  ++    +S   + EP     A+G++F+
Sbjct: 70  GVGCYALSLLCWLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEPGKAVGVIFI 129

Query: 107 MIGITLISFHTI 118
           ++G  L+    +
Sbjct: 130 LLGAVLVGIKPV 141


>gi|228936816|ref|ZP_04099602.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228946930|ref|ZP_04109227.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228812662|gb|EEM58986.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228822861|gb|EEM68707.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 120

 Score = 37.3 bits (85), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKIVAILFILIGVVILNFNS 104


>gi|332307313|ref|YP_004435164.1| small multidrug resistance protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174642|gb|AEE23896.1| small multidrug resistance protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 108

 Score = 37.3 bits (85), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L+  V    +S V +K             ++  F+      L    +  +F    
Sbjct: 1   MSWLFLILGVVAEAMSHVALK-------------ETNGFTKVIPSALVLMGHLAAFVFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    + I   +     I+  T LS++I+ +    TT  G+ FV IG+ +I+ 
Sbjct: 48  QAMKGMPIGIVHALWAGLAIVTVTLLSTVIYRQHLDLTTWFGMAFVAIGVAMINL 102


>gi|329948206|ref|ZP_08295078.1| putative multidrug transporter EmrE [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328522939|gb|EGF50044.1| putative multidrug transporter EmrE [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 107

 Score = 37.3 bits (85), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 22  MSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFTYIMVVAH-FSVRIAQTVVTSA 78
           ++ I  E     +         L W G     Y  +F      +     + +A  + ++ 
Sbjct: 7   VAAIASEVTGTLSLKLASDGRGLRWYGVVITGYLAAFAMLTATLKVGLPLGVAYGIWSAG 66

Query: 79  IIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            + +    S L++ EP   T   GI  +M G+ L+
Sbjct: 67  GVAVTAIASRLLFGEPLTRTMVAGIALIMAGVLLV 101


>gi|209522693|ref|ZP_03271251.1| small multidrug resistance protein [Arthrospira maxima CS-328]
 gi|209496742|gb|EDZ97039.1| small multidrug resistance protein [Arthrospira maxima CS-328]
          Length = 116

 Score = 37.3 bits (85), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 4/112 (3%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W  L+       + S+ +K S +    P              F  G   Y ++   +   
Sbjct: 8   WGFLILAAINNCVGSLLLKKSRLVATDPSLLT----LLLSPWFIGGIMVYGVNVILFAKA 63

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +    V  A  +       +     +L++ E F     IG+  +  GI ++S
Sbjct: 64  LDQLPVSTAYPIFAGISFTLIAIAGNLLFGERFDLNQWIGLSLIFTGIIIMS 115


>gi|87124601|ref|ZP_01080450.1| DMT superfamily multiple drug (quaternary ammonium compounds)efflux
           pump [Synechococcus sp. RS9917]
 gi|86168173|gb|EAQ69431.1| DMT superfamily multiple drug (quaternary ammonium compounds)efflux
           pump [Synechococcus sp. RS9917]
          Length = 115

 Score = 37.3 bits (85), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y +SF      +A   + IA ++     + + T    L++ E F W  A+G++ +  G+ 
Sbjct: 40  YILSFAFMGQALARLPLAIAYSIWCGLGMSVVTLTGILVYKEKFGWKVALGLLLIFSGVM 99

Query: 112 LISFH 116
           + ++H
Sbjct: 100 ISNYH 104


>gi|319950600|ref|ZP_08024508.1| multidrug efflux transporter [Dietzia cinnamea P4]
 gi|319435739|gb|EFV90951.1| multidrug efflux transporter [Dietzia cinnamea P4]
          Length = 106

 Score = 37.3 bits (85), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 52  YAISFFTYIMVVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           Y I+F    + +A    + +A  + T+A + +A   S L++ EP       GI+ +  G+
Sbjct: 37  YLIAFVFLSLTLAAGMPLGVAYGIWTAAGVALAAVFSRLLFREPLTPMMGAGIVLIACGV 96

Query: 111 TLI 113
            L+
Sbjct: 97  LLV 99


>gi|149191244|ref|ZP_01869500.1| hypothetical protein VSAK1_04202 [Vibrio shilonii AK1]
 gi|148834914|gb|EDL51895.1| hypothetical protein VSAK1_04202 [Vibrio shilonii AK1]
          Length = 141

 Score = 37.3 bits (85), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIMF 105
           +G   YA+S   ++M + H  + +A  +++ + +I+     +L W +E F W    GI F
Sbjct: 66  IGLGCYALSMACWVMALKHLPLGVAYPLLSLSYVIVYLLAVTLPWLNESFSWVKLSGIGF 125

Query: 106 VMIGITLI 113
           +++G+T I
Sbjct: 126 ILLGLTFI 133


>gi|126650744|ref|ZP_01722960.1| EbrB [Bacillus sp. B14905]
 gi|126592409|gb|EAZ86427.1| EbrB [Bacillus sp. B14905]
          Length = 123

 Score = 36.9 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 47/112 (41%), Gaps = 13/112 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           ++ L  ++   V ++  +K+S       P  A +               Y ISF++  + 
Sbjct: 4   YLFLTLSIISEVFATTMLKLSDGFTVPGPSVAVALG-------------YGISFYSLSLC 50

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +    + +A  + +     +   +  +IW + F   +A+GI  ++ G+ L++
Sbjct: 51  LKTLPLSLAYAIWSGVGTALTVIVGIVIWKDLFNLYSALGIALIIGGVILLN 102


>gi|311069880|ref|YP_003974803.1| putative metabolite-efflux transporter [Bacillus atrophaeus 1942]
 gi|310870397|gb|ADP33872.1| putative metabolite-efflux transporter [Bacillus atrophaeus 1942]
          Length = 118

 Score = 36.9 bits (84), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI L   +   V  +V +K S+              FS      L   FY  S F   
Sbjct: 1   MHWIYLCLAILFEVAGTVSMKFSV-------------GFSKLLPSMLLVCFYGGSLFFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           + +    V +A  V +   I++ + +  L ++E       + I  +++G+ 
Sbjct: 48  LTLKSIEVSVAYAVWSGMGIVLISMIGFLYFNEQMSVIKMVSIGLIIVGVV 98


>gi|157960100|ref|YP_001500134.1| small multidrug resistance protein [Shewanella pealeana ATCC
           700345]
 gi|157845100|gb|ABV85599.1| small multidrug resistance protein [Shewanella pealeana ATCC
           700345]
          Length = 108

 Score = 36.9 bits (84), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V   VLS V +K +               FS      L    +  +F    
Sbjct: 1   MSWIFLLLGVVAEVLSHVALKATD-------------GFSKPLPAALVILGHLTAFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T +S+L + E    T  IG++ V  G+ +I+F
Sbjct: 48  QAMKGMPVGVVHALWAGLAIVSVTLISALFYREHLDMTAWIGMVLVAAGVMMINF 102


>gi|108799832|ref|YP_640029.1| small multidrug resistance protein [Mycobacterium sp. MCS]
 gi|119868942|ref|YP_938894.1| small multidrug resistance protein [Mycobacterium sp. KMS]
 gi|126435475|ref|YP_001071166.1| small multidrug resistance protein [Mycobacterium sp. JLS]
 gi|108770251|gb|ABG08973.1| small multidrug resistance protein [Mycobacterium sp. MCS]
 gi|119695031|gb|ABL92104.1| small multidrug resistance protein [Mycobacterium sp. KMS]
 gi|126235275|gb|ABN98675.1| small multidrug resistance protein [Mycobacterium sp. JLS]
          Length = 114

 Score = 36.9 bits (84), Expect = 0.95,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 22  MSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV-AHFSVRIAQTVVTSAII 80
           ++ I  E     A      D     +    Y  +F     V+ A  +V +A  +  ++  
Sbjct: 8   IAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYGIWGASGT 67

Query: 81  IIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
                L++ I+ +PF W  A GI  ++ G+ L+ F
Sbjct: 68  AATAILAAGIFGDPFTWPIAAGIALIVGGVLLVEF 102


>gi|222096763|ref|YP_002530820.1| multidrug resistance protein, smr family [Bacillus cereus Q1]
 gi|221240821|gb|ACM13531.1| multidrug resistance protein, Smr family [Bacillus cereus Q1]
          Length = 120

 Score = 36.9 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKILAILFILIGVVILNFNS 104


>gi|253574186|ref|ZP_04851528.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846663|gb|EES74669.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 117

 Score = 36.9 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVM 107
           G   Y I+   +  V++   + +A   + +   ++A   +  ++ E   W   +G++ ++
Sbjct: 50  GIALYGIATLLWFAVLSRLPLSVAYP-LQALAYVLALLPAYFLFHETITWNKLLGVIVIL 108

Query: 108 IGITLIS 114
           +G+ L++
Sbjct: 109 LGVFLLA 115


>gi|229197404|ref|ZP_04324131.1| Uncharacterized membrane protein yvaE [Bacillus cereus m1293]
 gi|228586028|gb|EEK44119.1| Uncharacterized membrane protein yvaE [Bacillus cereus m1293]
          Length = 120

 Score = 36.9 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F+++G+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKILAILFILVGVVILNFNS 104


>gi|217960707|ref|YP_002339271.1| multidrug resistance protein, Smr family [Bacillus cereus AH187]
 gi|228986379|ref|ZP_04146516.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229139911|ref|ZP_04268476.1| Uncharacterized membrane protein yvaE [Bacillus cereus BDRD-ST26]
 gi|217064931|gb|ACJ79181.1| multidrug resistance protein, Smr family [Bacillus cereus AH187]
 gi|228643576|gb|EEK99842.1| Uncharacterized membrane protein yvaE [Bacillus cereus BDRD-ST26]
 gi|228773406|gb|EEM21835.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 120

 Score = 36.9 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKILAILFILIGVVILNFNS 104


>gi|196042613|ref|ZP_03109852.1| multidrug resistance protein, Smr family [Bacillus cereus 03BB108]
 gi|229185537|ref|ZP_04312717.1| Uncharacterized membrane protein yvaE [Bacillus cereus BGSC 6E1]
 gi|196026097|gb|EDX64765.1| multidrug resistance protein, Smr family [Bacillus cereus 03BB108]
 gi|228597932|gb|EEK55572.1| Uncharacterized membrane protein yvaE [Bacillus cereus BGSC 6E1]
          Length = 120

 Score = 36.5 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLSLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFLFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAILFILIGVVILNFNS 104


>gi|168184014|ref|ZP_02618678.1| putative membrane protein [Clostridium botulinum Bf]
 gi|237795835|ref|YP_002863387.1| multidrug resistance protein, SMR family [Clostridium botulinum Ba4
           str. 657]
 gi|182672984|gb|EDT84945.1| putative membrane protein [Clostridium botulinum Bf]
 gi|229263202|gb|ACQ54235.1| multidrug resistance protein, SMR family [Clostridium botulinum Ba4
           str. 657]
          Length = 118

 Score = 36.5 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 5/114 (4%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPH----FADSTRFSDGKLFWLGFFFYAISFFTYI 60
            +L +V LG L  + +K   +            +             G   Y +SF  +I
Sbjct: 4   LILTSVFLGALGQILVKYGAVNLTLNFSPAHFLSSIVSILKNMPVMAGIISYGVSFLLWI 63

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
            V++   +  A  +V+   + +    S   + E       +G+ F+MIG+ L++
Sbjct: 64  KVLSKVELSYAYPMVSLGYV-LVMIFSYFFFKENITPIRILGVAFIMIGVILVA 116


>gi|324325851|gb|ADY21111.1| small multidrug resistance protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 120

 Score = 36.5 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           +IAL   +   V ++  +KMS    EA  +   S     G         + +SF+   + 
Sbjct: 11  YIALAIAIITEVFATSMLKMS----EAFTNLLPSIGVILG---------FGLSFYFVSLA 57

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +    + I   + +    ++   +  L+WDE F      GI+ +++G+ L++
Sbjct: 58  LKTIPLSIGYAIWSGVGTVLTALIGVLVWDEHFNVFIFGGIVTIIVGVVLVN 109


>gi|238919328|ref|YP_002932843.1| membrane protein YfbJ [Edwardsiella ictaluri 93-146]
 gi|238868897|gb|ACR68608.1| membrane protein YfbJ [Edwardsiella ictaluri 93-146]
          Length = 127

 Score = 36.5 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWL--GFFFYAISFFTYI 60
           ++  LA+V L   + + ++ +++          +   +   ++WL  G   Y +S   ++
Sbjct: 4   YLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSMLCWL 63

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSL-IWDEPFYWTTAIGIMFVMIGITLI 113
             +    +  A  +++ + +++     SL ++ E       +G+  +++G+ +I
Sbjct: 64  FALRDLPLNRAYPLLSLSYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVI 117


>gi|184201856|ref|YP_001856063.1| small multidrug resistance protein [Kocuria rhizophila DC2201]
 gi|183582086|dbj|BAG30557.1| multidrug efflux transporter [Kocuria rhizophila DC2201]
          Length = 120

 Score = 36.5 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 16/113 (14%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFF-TYI 60
           KW+ L+A + L V  S+ +K ++  P+                + +    Y  +F   + 
Sbjct: 3   KWLYLVAAIVLEVSGSLSLKAAMDAPQ---------------FYVIVVLGYLGAFVGLFA 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            +    S+ +   +  +  +     LS +I++EP      +GI+ V+ G+  +
Sbjct: 48  ALRNGMSLGVGYGIWGATGVAATAVLSLVIFNEPITPVMGLGIVLVIAGVLTV 100


>gi|167625936|ref|YP_001676230.1| small multidrug resistance protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355958|gb|ABZ78571.1| small multidrug resistance protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 108

 Score = 36.5 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +               FS      L    +  +F    
Sbjct: 1   MSWIFLLLGVVAEALSHVALKATD-------------GFSKPLPAALVLLGHLTAFVFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  +G+  V  G+ +I+F
Sbjct: 48  QAMKGMPVGVVHALWAGLAIVTVTLLSALFYRQHLDMTAWVGMALVAAGVMMINF 102


>gi|34496206|ref|NP_900421.1| hypothetical protein CV_0751 [Chromobacterium violaceum ATCC 12472]
 gi|34102060|gb|AAQ58427.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 123

 Score = 36.5 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPP-----HFADSTRFSDGKLFWLGFFFYAISFFTY 59
            +L  V L   + + +K  +                    +       G   YA+S   +
Sbjct: 8   LILFGVLLNAAAQLCLKAGVRQIGHFDFSMANALPIGWSLATNLPIVGGLSCYAVSVVVW 67

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           IM ++   V +A  +++   ++    L+  ++ E       IGI  +++G+ L++
Sbjct: 68  IMALSRVEVSVAYPMLSIGYVVN-ALLAYWMFGEALATQKLIGIAVIIVGVVLVA 121


>gi|169827834|ref|YP_001697992.1| multidrug resistance protein [Lysinibacillus sphaericus C3-41]
 gi|168992322|gb|ACA39862.1| multidrug resistance protein [Lysinibacillus sphaericus C3-41]
          Length = 123

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           ++ L  ++   V ++  +K+S       P  A +               Y ISF++  + 
Sbjct: 4   YLFLTLSIISEVFATTMLKLSDGFTVLGPSVAVALG-------------YGISFYSLSLC 50

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +    + +A  + +     +   +  +IWD+ F   +A+GI  ++ G+ L++
Sbjct: 51  LKTLPLSLAYAIWSGVGTALTVIVGIVIWDDMFNLYSALGIALIIGGVILLN 102


>gi|184201855|ref|YP_001856062.1| small multidrug resistance protein [Kocuria rhizophila DC2201]
 gi|183582085|dbj|BAG30556.1| multidrug efflux transporter [Kocuria rhizophila DC2201]
          Length = 109

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 37  TRFSDGKLFWLGFFF-YAISFFTYIMVVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEP 94
              +  K++W+G    Y ++F+   +V++H   + +A  + ++  + I   +S + + EP
Sbjct: 25  LASAGRKVWWVGATVGYVLAFWLLAVVLSHGVPLGVAYGIWSATGVAITAVISRVFFKEP 84

Query: 95  FYWTTAIGIMFVMIGITLISF 115
             W   +G+  ++ G+  I F
Sbjct: 85  LTWLMCLGLSLIVGGVLCIDF 105


>gi|330447513|ref|ZP_08311161.1| mdtJ SMR protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491704|dbj|GAA05658.1| mdtJ SMR protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 121

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%)

Query: 41  DGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTA 100
               +W+ +    +S+F   +     ++ +A  V     I + T +S  ++D        
Sbjct: 30  GNWGYWVMYALICVSYFFLSLAAKKIAIGVAYAVWEGLGIALITMVSVFVFDAQLNTQEL 89

Query: 101 IGIMFVMIGITLISF 115
           IG+    +GI L++ 
Sbjct: 90  IGLAMATVGIVLVTL 104


>gi|196032285|ref|ZP_03099699.1| multidrug resistance protein, Smr family [Bacillus cereus W]
 gi|196037722|ref|ZP_03105032.1| multidrug resistance protein, Smr family [Bacillus cereus
           NVH0597-99]
 gi|218904441|ref|YP_002452275.1| multidrug resistance protein, Smr family [Bacillus cereus AH820]
 gi|228928354|ref|ZP_04091395.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229122835|ref|ZP_04252044.1| Uncharacterized membrane protein yvaE [Bacillus cereus 95/8201]
 gi|195995036|gb|EDX58990.1| multidrug resistance protein, Smr family [Bacillus cereus W]
 gi|196030992|gb|EDX69589.1| multidrug resistance protein, Smr family [Bacillus cereus
           NVH0597-99]
 gi|218539988|gb|ACK92386.1| multidrug resistance protein, Smr family [Bacillus cereus AH820]
 gi|228660699|gb|EEL16330.1| Uncharacterized membrane protein yvaE [Bacillus cereus 95/8201]
 gi|228831401|gb|EEM76997.1| Uncharacterized membrane protein yvaE [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 120

 Score = 36.5 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLSLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKIVAILFILIGVVILNFNS 104


>gi|227515551|ref|ZP_03945600.1| DMT superfamily drug/metabolite transporter [Lactobacillus
           fermentum ATCC 14931]
 gi|227085981|gb|EEI21293.1| DMT superfamily drug/metabolite transporter [Lactobacillus
           fermentum ATCC 14931]
          Length = 106

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 34/70 (48%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
                Y +SF+   +      + +A+++  +  II AT L   ++ E       +G+  +
Sbjct: 34  TSLACYGVSFYLMALSYQKLPLSVAESIWAALGIIAATLLGQFVYHERVALAQWLGVRLI 93

Query: 107 MIGITLISFH 116
           ++G+ L+SF+
Sbjct: 94  IVGVLLVSFN 103


>gi|221069617|ref|ZP_03545722.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
 gi|220714640|gb|EED70008.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
          Length = 122

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           + NV +     +  K +   P                  W+G   Y   F  ++  ++  
Sbjct: 14  ILNVLVDSGGQLAFKAAASEPGHRNGTQRWRFMLGRPWLWVGIACYIAEFLVWLAFLSLV 73

Query: 67  SVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +     ++ S  I+    L  +++ E        GI+ V IG+ ++  H
Sbjct: 74  PLSDG-VLLGSINIVAIMILGRVLFREKLAPMRVAGIVLVSIGVAIVGLH 122


>gi|157377357|ref|YP_001475957.1| small multidrug resistance protein [Shewanella sediminis HAW-EB3]
 gi|157319731|gb|ABV38829.1| small multidrug resistance protein [Shewanella sediminis HAW-EB3]
          Length = 108

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +       P                       +F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATDGFTRPLPAAMVILGHLT-------------AFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  +G++FV +G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGMAIVTVTLLSALFYRQHLDMTAWVGMLFVALGVVMINL 102


>gi|90578326|ref|ZP_01234137.1| multidrug efflux transporter [Vibrio angustum S14]
 gi|90441412|gb|EAS66592.1| multidrug efflux transporter [Vibrio angustum S14]
          Length = 109

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ LL  V     S V +K       A   F +           +    +  +F    
Sbjct: 1   MSWLFLLLGVLAEATSHVALK-------ATDSFTNPL------PSAVVILGHITAFLFLA 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             + +  V +     T   I + T LSS+I+ +       IG+  + +G+ +I+ 
Sbjct: 48  QAMKNIPVGVVHASWTGLAIALVTVLSSVIYKQHIDIKVWIGMAIIAVGVAVINL 102


>gi|301054789|ref|YP_003793000.1| putative Small Multidrug Resistance protein [Bacillus anthracis CI]
 gi|300376958|gb|ADK05862.1| putative Small Multidrug Resistance protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 120

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAILFILIGVVILNFNS 104


>gi|240139327|ref|YP_002963802.1| small multidrug efflux pump, DMT superfamily [Methylobacterium
           extorquens AM1]
 gi|240009299|gb|ACS40525.1| small multidrug efflux pump, DMT superfamily [Methylobacterium
           extorquens AM1]
          Length = 114

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%)

Query: 51  FYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           FYA SFF     +    + IA  +     I++   +S +++ +       +GI  ++ G+
Sbjct: 43  FYAGSFFFLSQALKSLPLGIAYAIWGGLGIVLTAIISVVVFRQTLDAAALVGIGMIVAGV 102

Query: 111 TLI 113
            ++
Sbjct: 103 VVV 105


>gi|239994529|ref|ZP_04715053.1| emrE protein [Alteromonas macleodii ATCC 27126]
          Length = 109

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 49  FFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMI 108
            FFYAIS   + MV+ +  + +A  + +   I + T  S + W + F     +GIM ++ 
Sbjct: 36  IFFYAISGMLFAMVLKNMGIGVAYAIWSGMGIALITAASVVFWKQTFDIYAVLGIMLIIS 95

Query: 109 GITLISFHT 117
           G  LI+  +
Sbjct: 96  GTLLITSKS 104


>gi|206974499|ref|ZP_03235415.1| multidrug resistance protein, Smr family [Bacillus cereus H3081.97]
 gi|206747142|gb|EDZ58533.1| multidrug resistance protein, Smr family [Bacillus cereus H3081.97]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F+++G+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKILAILFILVGVIILNFNS 104


>gi|296102587|ref|YP_003612733.1| multidrug efflux system protein MdtJ [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057046|gb|ADF61784.1| multidrug efflux system protein MdtJ [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 130

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L   +   +  ++ +K + +                   F L     ++S+      
Sbjct: 14  WILLALAILAEITGTLSMKWASVSD-------------GNTGFILMLVMISLSYIFLSFA 60

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I++ T  S L++DE        G+  +++GI LI   T
Sbjct: 61  VKKIALGVAYALWEGIGILLITLFSVLLFDETLSTMKIAGLTTLVVGIVLIKSGT 115


>gi|163735159|ref|ZP_02142595.1| multidrug resistance efflux protein, SMR family [Roseobacter
           litoralis Och 149]
 gi|161391617|gb|EDQ15950.1| multidrug resistance efflux protein, SMR family [Roseobacter
           litoralis Och 149]
          Length = 116

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%)

Query: 30  PPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSL 89
                 S +F+      L       SF+   + + +  + +   + +   II+      +
Sbjct: 24  YSALNTSAQFTKFWPSLLVIAGLGSSFYFLTLALEYMPLGVTYALASGLGIIVVALAGIV 83

Query: 90  IWDEPFYWTTAIGIMFVMIGITLISF 115
           I+ +       IG+  ++ GI +I+ 
Sbjct: 84  IFGQQLDLAAGIGLALIIAGIVVINA 109


>gi|49478159|ref|YP_037416.1| SMR family multidrug efflux pump [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329715|gb|AAT60361.1| multidrug resistance protein, SMR family (multidrug efflux
           transporter) [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F+++G+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAILFILVGVVILNFNS 104


>gi|149926834|ref|ZP_01915093.1| hypothetical protein LMED105_12572 [Limnobacter sp. MED105]
 gi|149824386|gb|EDM83604.1| hypothetical protein LMED105_12572 [Limnobacter sp. MED105]
          Length = 123

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 6/116 (5%)

Query: 4   IALLANVALGVLSSVFIKMS-----IIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFT 58
           + +L+ V L  L+ + +KM+     +I   +       +         LG F Y  S   
Sbjct: 7   MLVLSGVILNALAQLLLKMATNKVGVIEASSALSLGAMSALFLQWPMILGLFCYGFSLLI 66

Query: 59  YIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           ++M ++   V +A  ++    +I A      + +EP      + I  +++G+ L++
Sbjct: 67  WLMALSRVDVTLAYPMLAIGYVINAFAAQYFL-NEPVSLQRWVAIGVIVLGVALLA 121


>gi|229092261|ref|ZP_04223436.1| Uncharacterized membrane protein yvaE [Bacillus cereus Rock3-42]
 gi|228691078|gb|EEL44844.1| Uncharacterized membrane protein yvaE [Bacillus cereus Rock3-42]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F+++G+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAILFILVGVVILNFNS 104


>gi|114564584|ref|YP_752098.1| small multidrug resistance protein [Shewanella frigidimarina NCIMB
           400]
 gi|114335877|gb|ABI73259.1| small multidrug resistance protein [Shewanella frigidimarina NCIMB
           400]
          Length = 108

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +       P                       +F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATDGFTRPLPAVMVILGHLT-------------AFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  IG++ V +G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGMAIVTVTLLSALFYRQHLDMTAWIGMLLVALGVVMINL 102


>gi|160895580|ref|YP_001561162.1| hypothetical protein Daci_0131 [Delftia acidovorans SPH-1]
 gi|160361164|gb|ABX32777.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 122

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 1/110 (0%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           + NV +     +  K +   P      A     +     WLG   Y   F  ++  ++  
Sbjct: 14  VLNVLVDSGGQLAFKAAASQPGDLDGLARWRFMASRPWLWLGVGCYVAEFVLWLAFLSLV 73

Query: 67  SVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +     ++ S  I+       L++ E        GI+ V IG+ ++  H
Sbjct: 74  PLSEG-VLLGSINIVAIMIAGRLLFAEKLAPMRVAGIVLVSIGVAIVGLH 122


>gi|119357659|ref|YP_912303.1| small multidrug resistance protein [Chlorobium phaeobacteroides DSM
           266]
 gi|119355008|gb|ABL65879.1| small multidrug resistance protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 123

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L+  +   V  +  +K+S       P                 F FYA+SF    
Sbjct: 16  MPWLYLVLAIIFEVSGTTCMKLSEGFTRIVPTL-------------FIFIFYAVSFTFVT 62

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + V    + +   V ++      T +    + E       I ++F++IG+  + F
Sbjct: 63  LTVKVLPLGLTYAVWSAIGTASITIVGIFWFGEGINIVKTISLLFIIIGVVGLHF 117


>gi|302187372|ref|ZP_07264045.1| hypothetical protein Psyrps6_13523 [Pseudomonas syringae pv.
           syringae 642]
          Length = 114

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L     L  L  +  K ++        F  +         WL           ++
Sbjct: 1   MIWLMLACACLLTCLGQIAQKYAVQDWRG--AFPGAFAALRSIWLWLAVACLGSGLLVWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           +V+    V IA  ++    +++ T     +++EP      +GI  ++IG+
Sbjct: 59  LVLQRLDVGIAYPMLGVN-VVLITLSGRYVFNEPVDAQHWLGIALILIGV 107


>gi|294499934|ref|YP_003563634.1| small multidrug resistance (SMR) family protein [Bacillus
           megaterium QM B1551]
 gi|295705317|ref|YP_003598392.1| small multidrug resistance (SMR) family protein [Bacillus
           megaterium DSM 319]
 gi|294349871|gb|ADE70200.1| small multidrug resistance (SMR) family protein [Bacillus
           megaterium QM B1551]
 gi|294802976|gb|ADF40042.1| small multidrug resistance (SMR) family protein [Bacillus
           megaterium DSM 319]
          Length = 108

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 33/81 (40%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           + ++F+     + H  + +A  + +     +   +  +IW E    
Sbjct: 26  GFTKFWPSLGVLLGFGLAFYALSTSLQHIPLSVAYAIWSGVGTAVTAVIGVVIWKESGSL 85

Query: 98  TTAIGIMFVMIGITLISFHTI 118
           T   GI+ ++ G+ L++  ++
Sbjct: 86  TMVFGIVLIIAGVILLNLKSV 106


>gi|228915905|ref|ZP_04079480.1| Small multidrug resistance protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300118286|ref|ZP_07056033.1| multidrug resistance protein, Smr family [Bacillus cereus SJ1]
 gi|228843723|gb|EEM88797.1| Small multidrug resistance protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|298724255|gb|EFI64950.1| multidrug resistance protein, Smr family [Bacillus cereus SJ1]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLSLAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAILFILIGVVILNFNS 104


>gi|148380354|ref|YP_001254895.1| hypothetical protein CBO2400 [Clostridium botulinum A str. ATCC
           3502]
 gi|153933125|ref|YP_001384574.1| hypothetical protein CLB_2263 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936912|ref|YP_001388090.1| hypothetical protein CLC_2246 [Clostridium botulinum A str. Hall]
 gi|148289838|emb|CAL83946.1| putative transport protein [Clostridium botulinum A str. ATCC 3502]
 gi|152929169|gb|ABS34669.1| multidrug resistance protein, SMR family [Clostridium botulinum A
           str. ATCC 19397]
 gi|152932826|gb|ABS38325.1| multidrug resistance protein, SMR family [Clostridium botulinum A
           str. Hall]
 gi|322806664|emb|CBZ04233.1| ethidium bromide-methyl viologen resistance protein EmrE
           [Clostridium botulinum H04402 065]
          Length = 118

 Score = 36.1 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                      G   Y ISF  +I V++   +  A  +V+   + +    S   + E   
Sbjct: 40  VSILKNMPVMAGIISYGISFLLWIKVLSKVELSYAYPMVSLGYV-LVMIFSYFFFKENIT 98

Query: 97  WTTAIGIMFVMIGITLIS 114
               +G+ F+MIG+ L++
Sbjct: 99  PIRILGVAFIMIGVILVA 116


>gi|317054329|ref|YP_004118354.1| putative transport/receptor protein [Pantoea sp. At-9b]
 gi|316952324|gb|ADU71798.1| putative transport/receptor protein [Pantoea sp. At-9b]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 44  LFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIII-ATCLSSLIWDEPFYWTTAIG 102
           L ++G   YA+S   +++ + H ++     +++ + +++    +S  ++ EPF W++  G
Sbjct: 44  LLFIGLSAYALSMLCWMLALRHLALSRLYPLLSISYVLVWLAAISLPMFGEPFRWSSLAG 103

Query: 103 IMFVMIGITLISF 115
           +  ++ G+  +S 
Sbjct: 104 VGLIVAGLLCVSL 116


>gi|170760349|ref|YP_001787710.1| hypothetical protein CLK_1775 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407338|gb|ACA55749.1| multidrug resistance protein, SMR family [Clostridium botulinum A3
           str. Loch Maree]
          Length = 118

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                      G   Y +SF  +I V++   +  A  +V+   + +    S   + E   
Sbjct: 40  LSILKNVPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSLGYV-LVMIFSYFFFKENIT 98

Query: 97  WTTAIGIMFVMIGITLIS 114
               +G+ F+MIG+ L++
Sbjct: 99  PIRILGVAFIMIGVILVA 116


>gi|153940226|ref|YP_001391697.1| hypothetical protein CLI_2455 [Clostridium botulinum F str.
           Langeland]
 gi|168180722|ref|ZP_02615386.1| putative membrane protein [Clostridium botulinum NCTC 2916]
 gi|226949752|ref|YP_002804843.1| multidrug resistance protein, SMR family [Clostridium botulinum A2
           str. Kyoto]
 gi|152936122|gb|ABS41620.1| putative membrane protein [Clostridium botulinum F str. Langeland]
 gi|182668462|gb|EDT80441.1| putative membrane protein [Clostridium botulinum NCTC 2916]
 gi|226844160|gb|ACO86826.1| multidrug resistance protein, SMR family [Clostridium botulinum A2
           str. Kyoto]
 gi|295319725|gb|ADG00103.1| putative membrane protein [Clostridium botulinum F str. 230613]
          Length = 118

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                      G   Y +SF  +I V++   +  A  +V+   + +    S   + E   
Sbjct: 40  VSILKNMPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSLGYV-LVMIFSYFFFKENIT 98

Query: 97  WTTAIGIMFVMIGITLIS 114
               +G+ F+MIG+ L++
Sbjct: 99  PIRILGVAFIMIGVILVA 116


>gi|325067920|ref|ZP_08126593.1| small multidrug resistance protein [Actinomyces oris K20]
          Length = 117

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 52  YAISFFTYIMVV-AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           YA++F    + + A   + +A  +  +  + +   LS+L++ EP     A+GI  +M G+
Sbjct: 38  YALAFILLSLTLKAGMPLGVAYGLWGALGVALTAMLSTLVFGEPITVLVALGIALIMAGV 97

Query: 111 TLISF 115
            L+  
Sbjct: 98  LLVEV 102


>gi|104784124|ref|YP_610622.1| SMR family multidrug efflux pump [Pseudomonas entomophila L48]
 gi|95113111|emb|CAK17839.1| multidrug transport protein (SMR superfamily) [Pseudomonas
           entomophila L48]
          Length = 119

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 55  SFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           S+F   + V    V +A  +     I++ T +S L   E   WT A+G+  ++ GI L+ 
Sbjct: 43  SYFFLALAVKRVPVGVAYALWEGFGIVLITLISVLWLGESLGWTKALGLAVMIAGILLVK 102

Query: 115 FHT 117
             T
Sbjct: 103 AGT 105


>gi|292654347|ref|YP_003534244.1| Quaternary ammonium compound-resistance protein qacE [Haloferax
           volcanii DS2]
 gi|291371207|gb|ADE03434.1| Quaternary ammonium compound-resistance protein qacE [Haloferax
           volcanii DS2]
          Length = 110

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 32/85 (37%)

Query: 31  PHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLI 90
                S  FS           Y ++F+   + +    + +      +  I+    +  + 
Sbjct: 19  TALKLSAGFSKPLPSLGVVAGYGLAFYLVSLTLEELPIGVVYGTWAALGIVGVAAIGVVA 78

Query: 91  WDEPFYWTTAIGIMFVMIGITLISF 115
           +DEP   T  +G++ ++ GI  ++ 
Sbjct: 79  FDEPVDLTGVVGLLLILAGIYCVNV 103


>gi|264676280|ref|YP_003276186.1| hypothetical protein CtCNB1_0144 [Comamonas testosteroni CNB-2]
 gi|262206792|gb|ACY30890.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
          Length = 124

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           + NV +     +  K +   P                  W+G   Y   F  ++  ++  
Sbjct: 16  ILNVLVDSGGQLAFKAAASEPGHRNGTERWRFMLARPWLWVGIACYVAEFLVWLAFLSLV 75

Query: 67  SVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +     ++ S  I+    L  +++ E        GI+ V +G+ ++  H
Sbjct: 76  PLSDG-VLLGSINIVAIMILGRVLFREKLAPMRVAGIVLVSVGVAIVGLH 124


>gi|47564429|ref|ZP_00235474.1| SMR drug efflux transporter [Bacillus cereus G9241]
 gi|47558581|gb|EAL16904.1| SMR drug efflux transporter [Bacillus cereus G9241]
          Length = 120

 Score = 36.1 bits (82), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCFAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F++IG+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITIIGFVYFGESINIIKILAILFILIGVVILNFNS 104


>gi|312138262|ref|YP_004005598.1| small multidrug resistance protein [Rhodococcus equi 103S]
 gi|311887601|emb|CBH46913.1| putative small multidrug resistance protein [Rhodococcus equi 103S]
          Length = 121

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFT 58
           MKW  L+  +   V++++                 S R +     W       Y  SF  
Sbjct: 1   MKWWLLVGAIVCEVVATL-----------------SLRAATDHPSWYALVVMGYVASFGF 43

Query: 59  YIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
              V+   +V +A  +  +  I I    +++I+ +        GI+ V+ G+ ++
Sbjct: 44  LSAVLRRMAVGVAYGIWGACGITITAVAAAVIFGDALTVLMGFGIVLVIAGVLVV 98


>gi|254931485|ref|ZP_05264844.1| small multidrug resistance protein [Listeria monocytogenes HPB2262]
 gi|293583037|gb|EFF95069.1| small multidrug resistance protein [Listeria monocytogenes HPB2262]
          Length = 123

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L   +   +  S  +K S    +  P       F              +SF    
Sbjct: 1   MSYLYLALAIVGEITGSSLLKASEGFSKLFPTIGVIIAFV-------------VSFSFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + +    +  A  +     +++ T +S LIW E     +  GI  ++ G+ +++ 
Sbjct: 48  LSLKTIPLNTAYALWAGLGLVLTTIISVLIWKEKLNMASIAGITLILAGVVILNL 102


>gi|330970160|gb|EGH70226.1| hypothetical protein PSYAR_06674 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 112

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIP-PEAPPHFADSTRFSDGKLFWLGFFFYAISFFTY 59
           M W+ L +   L  L  +  K ++     A P    + R       WL           +
Sbjct: 1   MTWLMLASACLLTCLGQIAQKYAVQGWRGAFPGVFAALRSL-----WLALACLGSGLLIW 55

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           ++V+    V IA  ++    + + T     +++EP      +GI  +++G+ 
Sbjct: 56  LLVLQRLDVGIAYPMLGVNFV-LITLAGRYVFNEPVDVRHWLGIALILVGVF 106


>gi|241765058|ref|ZP_04763051.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
 gi|241365335|gb|EER60150.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
          Length = 94

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 29  APPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSS 88
           A P   +   +            Y I+   +I ++ H  + +A   +     +I   L+ 
Sbjct: 8   ALPVQPEVMDWLLNGWLITSLALYGITTLGWIWILRHAPLHLAYPFM-GLAFLIVPTLAW 66

Query: 89  LIWDEPFYWTTAIGIMFVMIGITLISFH 116
           L   EP  W T  G + ++ G+ L S H
Sbjct: 67  LFLGEPLQWRTLAGGVLIVAGVALASTH 94


>gi|28210978|ref|NP_781922.1| transporter [Clostridium tetani E88]
 gi|28203417|gb|AAO35859.1| transporter [Clostridium tetani E88]
          Length = 118

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 5   ALLANVALGVLSSVFIKMSIIP------PEAPPHFADSTRFSDGKLFWLGFFFYAISFFT 58
            +L++V LG L  + +K+          P                    G   Y  SF  
Sbjct: 4   LILSSVFLGALGQILVKVGATSLNLSFAPGQF--IPSIISILKNFFVMSGIVSYGTSFLI 61

Query: 59  YIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           +I V++   +  A  +V+   +I  T  +    +E       +GI+ ++ G+ LIS +
Sbjct: 62  WIKVLSKVELSYAYPMVSLGYVIT-TIYAYFFLNENISIERVLGILLIIGGVFLISRN 118


>gi|332991850|gb|AEF01905.1| emrE protein [Alteromonas sp. SN2]
          Length = 109

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 37  TRFSDGKLFWL----GFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
            + SDG   W        FY +S   +  V+ H  V +A  + +   I + T  S ++W 
Sbjct: 20  LKASDGWEKWYFGYGAIAFYMVSGILFATVLKHMGVGVAYAIWSGMGIALITAASVILWK 79

Query: 93  EPFYWTTAIGIMFVMIGITLISFHT 117
           + F +  A+GI+ ++ G  LI+  +
Sbjct: 80  QTFDFYVAMGIILIVSGTLLITSKS 104


>gi|170757118|ref|YP_001781942.1| hypothetical protein CLD_2241 [Clostridium botulinum B1 str. Okra]
 gi|169122330|gb|ACA46166.1| multidrug resistance protein, SMR family [Clostridium botulinum B1
           str. Okra]
          Length = 118

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                      G   Y +SF  +I V++   +  A  +V+   + +    S   + E   
Sbjct: 40  VSILKNMPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSLGYV-LVMIFSYFFFKENIT 98

Query: 97  WTTAIGIMFVMIGITLIS 114
               +G+ F+MIG+ L++
Sbjct: 99  PIRILGVAFIMIGVILVA 116


>gi|253689291|ref|YP_003018481.1| hypothetical protein PC1_2922 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755869|gb|ACT13945.1| protein of unknown function DUF6 transmembrane [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 130

 Score = 36.1 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVA 64
            +LA++A  ++ S  + +  I     P  +           + G   Y +S   + MV+ 
Sbjct: 13  IVLASIAQVLMKSGMLALPSISLTHWPSLSTLMGGWPAVAVFCGMVCYGLSMVCWFMVLR 72

Query: 65  HFSVRIAQTVVT-SAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
           +  +  A  +++ S  ++    +     +EP      +G++ +M+G+ L++ +
Sbjct: 73  YLPLSRAYPLISLSYAVVYLAAVFLPWLNEPMSLRKNLGVLIIMLGVWLVTRN 125


>gi|47092627|ref|ZP_00230415.1| multidrug resistance protein [Listeria monocytogenes str. 4b H7858]
 gi|254901209|ref|ZP_05261133.1| multidrug resistance protein [Listeria monocytogenes J0161]
 gi|47019055|gb|EAL09800.1| multidrug resistance protein [Listeria monocytogenes str. 4b H7858]
          Length = 114

 Score = 36.1 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 34/64 (53%)

Query: 54  ISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           I+F+T  + +    + +A  + +     +   +  L+W+EPF   T IG++ ++ G+ ++
Sbjct: 42  IAFYTLSLSLKTLPLSLAYAIWSGVGTALTALIGVLVWNEPFNILTFIGLVMIVGGVIIL 101

Query: 114 SFHT 117
           +  +
Sbjct: 102 NQRS 105


>gi|55377154|ref|YP_135004.1| quaternary ammonium compound-resistance protein [Haloarcula
           marismortui ATCC 43049]
 gi|55229879|gb|AAV45298.1| quaternary ammonium compound-resistance protein [Haloarcula
           marismortui ATCC 43049]
          Length = 123

 Score = 35.7 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 31/64 (48%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y ++F+   + +    + +      +  I+    +  +++DEP     A+GI+ ++IG+ 
Sbjct: 53  YGLAFYLVSLTLEDLPIGVVYGTWAALGIVGVAAIGIVVFDEPIDLPGAVGILLIIIGVY 112

Query: 112 LISF 115
            ++ 
Sbjct: 113 CVNV 116


>gi|42782365|ref|NP_979612.1| SMR family multidrug efflux pump [Bacillus cereus ATCC 10987]
 gi|42738290|gb|AAS42220.1| multidrug resistance protein, Smr family [Bacillus cereus ATCC
           10987]
          Length = 120

 Score = 35.7 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   V  +  +K+S    +  P               L F FY +SF    
Sbjct: 1   MQWIYLCFAILFEVAGTTAMKLSDGLTKLVPSI-------------LIFVFYVVSFAFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +A  V +   I+  T +  + + E       + I+F+++G+ +++F++
Sbjct: 48  FALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINIIKILAILFILVGVVILNFNS 104


>gi|296445727|ref|ZP_06887680.1| small multidrug resistance protein [Methylosinus trichosporium
           OB3b]
 gi|296256707|gb|EFH03781.1| small multidrug resistance protein [Methylosinus trichosporium
           OB3b]
          Length = 203

 Score = 35.7 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 30/111 (27%), Gaps = 13/111 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L       V   + +K +       P  A                    S     
Sbjct: 59  MAWLILFLGGMFEVGWLITMKYTDGFTRLAPSAAT-------------LALMGASVGCLG 105

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           + V    +  A  V T   I  A  +   ++ E       + I  ++ G+ 
Sbjct: 106 IAVKTIPMGTAYAVWTGTSIAGAAVVGICVFGESTTPLRLVSIALILAGVV 156


>gi|193706912|ref|XP_001950866.1| PREDICTED: magnesium transporter NIPA2-like [Acyrthosiphon pisum]
          Length = 349

 Score = 35.7 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 3/110 (2%)

Query: 8   ANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFS 67
              +  +     +++S+              +    L+W G               A   
Sbjct: 29  IGASFIIKKKALVQISLGSGRR--AANGGYGYLSNWLWWFGLSMMGFGEVFNFAAYAFAP 86

Query: 68  VRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
             +    + +  +I+A  LSS   +E       IG    +IG T++  H+
Sbjct: 87  ASVVTP-LGALSVIVAAILSSKYLNEQLNLLAKIGCFMCIIGSTVMVIHS 135


>gi|251794462|ref|YP_003009193.1| hypothetical protein Pjdr2_0426 [Paenibacillus sp. JDR-2]
 gi|247542088|gb|ACS99106.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
          Length = 116

 Score = 35.7 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAH 65
           +L +V +G    V +K   + P      +   R         G F Y  S   ++ V+  
Sbjct: 10  ILVSVIMGAAGQVLLKFGAMHPNE--SMSGPLRML-NLYNAGGIFLYGASALIWMFVLRK 66

Query: 66  FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
             +  A   V S   II    S   + E        G++ ++ GI  IS
Sbjct: 67  VELSYAYPFV-SLAYIIVLVASYYFFGESINTYKIAGLVLIVGGIAFIS 114


>gi|116668015|pdb|2I68|A Chain A, Cryo-Em Based Theoretical Model Structure Of Transmembrane
           Domain Of The Multidrug-Resistance Antiporter From E.
           Coli Emre
 gi|116668016|pdb|2I68|B Chain B, Cryo-Em Based Theoretical Model Structure Of Transmembrane
           Domain Of The Multidrug-Resistance Antiporter From E.
           Coli Emre
          Length = 137

 Score = 35.7 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAIIGMMLICAGVLIINL 103


>gi|167461896|ref|ZP_02326985.1| DMT superfamily drug/metabolite transporter [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 134

 Score = 35.7 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 31/66 (46%)

Query: 49  FFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMI 108
              ++I+F+   + + + S+ +A      A   +   +S +++ E        G++F++ 
Sbjct: 47  IAGFSIAFYCLSLCLRYLSMSLAYATWAGAGTALTALISVVVFRESLNVIAVFGLLFIIG 106

Query: 109 GITLIS 114
           G+  ++
Sbjct: 107 GVFFLN 112


>gi|299533384|ref|ZP_07046766.1| hypothetical protein CTS44_21375 [Comamonas testosteroni S44]
 gi|298718590|gb|EFI59565.1| hypothetical protein CTS44_21375 [Comamonas testosteroni S44]
          Length = 122

 Score = 35.7 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           + NV +     +  K +   P                  W+G   Y   F  ++  ++  
Sbjct: 14  ILNVLVDSGGQLAFKAAASEPGHRNGTERWRFMLARPWLWVGIACYVAEFLVWLAFLSLV 73

Query: 67  SVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFH 116
            +     ++ S  I+    L  +++ E        GI+ V +G+ ++  H
Sbjct: 74  PLSDG-VLLGSINIVAIMILGRVLFREKLAPMRVAGIVLVSVGVAIVGLH 122


>gi|196229348|ref|ZP_03128213.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
 gi|196226580|gb|EDY21085.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
          Length = 114

 Score = 35.7 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 2/115 (1%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M  + ++ ++   V   + +K ++      P   D  R     +F    F   ISFF  I
Sbjct: 1   MTALLIVLSLVTIVAGQLLLKAAMNKLGEFPK-GDPRRRQAWWIFAGSIFSMTISFFVNI 59

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
            ++    +         ++I+IA C S+    E    T   GI+ V  G+ L+S 
Sbjct: 60  GLLQKLELSYLFPFQDLSVILIAVC-SAYFLKERLSATLITGILLVTAGVILVSA 113


>gi|17988784|ref|NP_541417.1| transporter, DME family [Brucella melitensis bv. 1 str. 16M]
 gi|148558410|ref|YP_001257789.1| hypothetical protein BOV_A0801 [Brucella ovis ATCC 25840]
 gi|225629316|ref|ZP_03787349.1| transporter, DME family protein [Brucella ceti str. Cudo]
 gi|237816873|ref|ZP_04595865.1| transporter, DME family [Brucella abortus str. 2308 A]
 gi|17984601|gb|AAL53681.1| transporter, dme family [Brucella melitensis bv. 1 str. 16M]
 gi|148369695|gb|ABQ62567.1| putative membrane protein [Brucella ovis ATCC 25840]
 gi|225615812|gb|EEH12861.1| transporter, DME family protein [Brucella ceti str. Cudo]
 gi|237787686|gb|EEP61902.1| transporter, DME family [Brucella abortus str. 2308 A]
          Length = 159

 Score = 35.7 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 1   MKWIALLA-NVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAI 54
           MK+I  +   V     + + +K  +I        AD+      +       + G F + I
Sbjct: 21  MKYIPFILFTVMTNAAAQLMLKYGMITLGPISFSADTLIQRIFQIVFNPWVFAGLFTFVI 80

Query: 55  SFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           S  +++ V++   +  A   ++ A + +A C + L++ E        GI F+ IG  LI+
Sbjct: 81  SMASHLYVLSKVDLSFAYPFLSLAYVAVALC-AWLLFKEELGAYKIAGIAFICIGTILIA 139


>gi|319950601|ref|ZP_08024509.1| small multidrug resistance protein [Dietzia cinnamea P4]
 gi|319435740|gb|EFV90952.1| small multidrug resistance protein [Dietzia cinnamea P4]
          Length = 127

 Score = 35.7 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           KW+ L A +   V  S+ +K ++  P                L+ +    Y  +F     
Sbjct: 15  KWLNLAAAIVCEVAGSLALKGALDRPA---------------LYVVVVTGYLGAFAFLAR 59

Query: 62  VV-AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            + A   + +A  +  +  + +   LS+LI+ EP       GI  +  G+  +
Sbjct: 60  TLKAGLPLGVAYGIWGATGVALTAGLSALIFAEPLTPLMGAGIAVITAGVLCV 112


>gi|300715797|ref|YP_003740600.1| transport/receptor protein [Erwinia billingiae Eb661]
 gi|299061633|emb|CAX58748.1| Putative transport/receptor protein [Erwinia billingiae Eb661]
          Length = 129

 Score = 35.7 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLF-----WLGFFFYAIS 55
           M  +  L +V L   + + ++ S++   +    +          F     + G   YA S
Sbjct: 1   MGILWALCSVLLVGGAQLLLRWSMMSLPSVGEPSAFFSALLSWPFAASALFAGLAAYACS 60

Query: 56  FFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSL-IWDEPFYWTTAIGIMFVMIGITLIS 114
              +++ +   ++  A  +++ + +++      L  ++E F W    G+  +  G+ LI 
Sbjct: 61  MLCWLLALRRIALSKAYPLLSLSYVLVWAAALILPAFNEVFQWGKLAGVALIFSGLLLIC 120

Query: 115 FH 116
           + 
Sbjct: 121 WR 122


>gi|255019309|ref|ZP_05291435.1| multidrug resistance protein [Listeria monocytogenes FSL F2-515]
          Length = 114

 Score = 35.7 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 34/64 (53%)

Query: 54  ISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           I+F+T  + +    + +A  + +     +   +  L+W+EPF   T IG++ ++ G+ ++
Sbjct: 42  IAFYTLSLSLKTLPLSLAYAIWSGVGTALTALIGVLVWNEPFNILTFIGLVMIVGGVIIL 101

Query: 114 SFHT 117
           +  +
Sbjct: 102 NQRS 105


>gi|170782088|ref|YP_001710421.1| putative integral membrane efflux protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169156657|emb|CAQ01813.1| putative integral membrane efflux protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 105

 Score = 35.7 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 52  YAISFFTYIMVV-AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           Y  +F    + + A   + +A  + T+A + +   +  + + E F W   IG+  V+ G+
Sbjct: 37  YLAAFGLLTLTLDAGVPLGVAYGIWTAAGVALTAVIGVIAFKERFTWLMGIGVALVVGGV 96

Query: 111 TLISFHT 117
            LI   T
Sbjct: 97  LLIELGT 103


>gi|301060262|ref|ZP_07201129.1| putative membrane protein [delta proteobacterium NaphS2]
 gi|300445774|gb|EFK09672.1| putative membrane protein [delta proteobacterium NaphS2]
          Length = 123

 Score = 35.7 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSD-----GKLFWLGFFFYAISFFTY 59
            +   V L   + + +K  +          ++              + G   Y +S   +
Sbjct: 7   LIFLGVLLNAAAQLCLKQGMRQIGYFAFSLENLLPIGLKTALNPFVFAGLACYVVSVVVW 66

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           +M ++   V  A  +++   I+       L + E    T   GI+ + +G+ LI+
Sbjct: 67  LMALSRVDVSYAYPLLSVGYIVT-AFAGQLFFGESLGLTRWAGIIVICVGVYLIT 120


>gi|289706317|ref|ZP_06502676.1| multidrug resistance protein, SMR family [Micrococcus luteus SK58]
 gi|289556951|gb|EFD50283.1| multidrug resistance protein, SMR family [Micrococcus luteus SK58]
          Length = 114

 Score = 35.7 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           MKW+ L   +AL V  S+ +K ++  P                 F L    Y  +F    
Sbjct: 1   MKWVFLAGAIALEVTGSLSLKAAVDAPG---------------FFALVAVGYIGTFTLLA 45

Query: 61  MVVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
             +     + +   +  +A + +   LS++I+ EP      +GI  V+ G+  +
Sbjct: 46  GALKQGMPLGVGYGIWGAAGVALTAILSAVIFGEPLTALMTLGIAVVIGGVLCV 99


>gi|91211154|ref|YP_541140.1| multidrug efflux protein [Escherichia coli UTI89]
 gi|218558793|ref|YP_002391706.1| multidrug efflux protein [Escherichia coli S88]
 gi|218695541|ref|YP_002403208.1| multidrug efflux protein [Escherichia coli 55989]
 gi|237705894|ref|ZP_04536375.1| multidrug efflux protein [Escherichia sp. 3_2_53FAA]
 gi|26108608|gb|AAN80811.1|AE016762_64 EmrE protein [Escherichia coli CFT073]
 gi|91072728|gb|ABE07609.1| EmrE SMR transporter [Escherichia coli UTI89]
 gi|218352273|emb|CAU98030.1| putative multidrug resistance protein; DLP12 prophage [Escherichia
           coli 55989]
 gi|218365562|emb|CAR03289.2| putative multidrug resistance protein; DLP12 prophage [Escherichia
           coli S88]
 gi|226900651|gb|EEH86910.1| multidrug efflux protein [Escherichia sp. 3_2_53FAA]
          Length = 170

 Score = 35.7 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 86  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 145

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 146 PAIIGMMLICAGVLVINL 163


>gi|24376367|ref|NP_720475.1| multidrug efflux transporter [Shewanella oneidensis MR-1]
 gi|24345281|gb|AAN53075.1| multidrug efflux transporter, DMT superfamily [Shewanella
           oneidensis MR-1]
          Length = 108

 Score = 35.7 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +       P                       +F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATDGFTRPIPAVMVILGHLT-------------AFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  IG++ V +G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGMAIVTVTLLSALFYRQHLDMTAWIGMLLVALGVIMINL 102


>gi|315045370|ref|XP_003172060.1| solute carrier family 12 member 3 [Arthroderma gypseum CBS 118893]
 gi|311342446|gb|EFR01649.1| solute carrier family 12 member 3 [Arthroderma gypseum CBS 118893]
          Length = 1191

 Score = 35.3 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 6/111 (5%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           L  +     S +F   S+      P  +       G    L FF Y I   T    V   
Sbjct: 309 LFGILFPATSGIFAGTSMSGDLKNPSRSIPKGTLYG--LALTFFTYTIVILTMAASVTRE 366

Query: 67  SV----RIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           S+     I Q +  S  +I+    S+  +        A  ++  +    L+
Sbjct: 367 SLYKDVNIIQDINISGSLIVLGEFSTSFFSSLMGIIGAAKVLQAIARDALL 417


>gi|304311094|ref|YP_003810692.1| Quaternary ammonium compound resistance protein [gamma
           proteobacterium HdN1]
 gi|301796827|emb|CBL45039.1| Quaternary ammonium compound resistance protein [gamma
           proteobacterium HdN1]
          Length = 110

 Score = 35.3 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L   +   V+++                  S  F+      +    Y  +F+   
Sbjct: 1   MNWLLLGIAILSEVIAT-------------SALKSSEGFTRLWPSVIVIAGYTSAFYFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + +    + IA  V + A + +   +  +++ +   +   IGI  ++ G+ +++ 
Sbjct: 48  LTLKSIPIGIAYAVWSGAGVALIAVIGWVMFGQKLDFAAGIGIGLIVAGVVVLNV 102


>gi|218699834|ref|YP_002407463.1| multidrug efflux system protein MdtJ [Escherichia coli IAI39]
 gi|218369820|emb|CAR17591.1| multidrug efflux system transporter [Escherichia coli IAI39]
          Length = 121

 Score = 35.3 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L   +A  +  ++F+K + +                   F L     ++S+      
Sbjct: 5   WILLGLAIATEITGTLFMKWASVSE-------------GNGGFILMLVMISLSYIFLSFA 51

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I+  T  S L++DE        G+  ++ GI LI   T
Sbjct: 52  VKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 106


>gi|206969746|ref|ZP_03230700.1| transporter [Bacillus cereus AH1134]
 gi|218235015|ref|YP_002369715.1| transporter [Bacillus cereus B4264]
 gi|218235419|ref|YP_002369720.1| transporter [Bacillus cereus B4264]
 gi|228942086|ref|ZP_04104627.1| hypothetical protein bthur0008_47180 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975016|ref|ZP_04135576.1| hypothetical protein bthur0003_47650 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981607|ref|ZP_04141903.1| hypothetical protein bthur0002_47670 [Bacillus thuringiensis Bt407]
 gi|229072407|ref|ZP_04205610.1| hypothetical protein bcere0025_45680 [Bacillus cereus F65185]
 gi|206735434|gb|EDZ52602.1| transporter [Bacillus cereus AH1134]
 gi|218162972|gb|ACK62964.1| transporter [Bacillus cereus B4264]
 gi|218163376|gb|ACK63368.1| transporter [Bacillus cereus B4264]
 gi|228710730|gb|EEL62702.1| hypothetical protein bcere0025_45680 [Bacillus cereus F65185]
 gi|228778092|gb|EEM26363.1| hypothetical protein bthur0002_47670 [Bacillus thuringiensis Bt407]
 gi|228784721|gb|EEM32740.1| hypothetical protein bthur0003_47650 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817602|gb|EEM63686.1| hypothetical protein bthur0008_47180 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326942688|gb|AEA18584.1| transporter family protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 114

 Score = 35.3 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           +++ ++ +V +GV+  + +K   +  ++                + G  FY +S   +++
Sbjct: 3   QFLMIILSVGMGVVGQILLKFGAMKSQSSAAVG--IMNFINVPNFFGLAFYGLSALLWMI 60

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           V+    +  A  +V+   +      S+L++ E   +    G++ ++ GI  I+
Sbjct: 61  VLRKVDLSYAYPMVSFGYV-FVIIASALLFGETINFMKIAGMVCIVAGILFIA 112


>gi|117618594|ref|YP_855532.1| hypothetical protein AHA_0986 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|257096130|sp|A0KGY2|ARNF_AERHH RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnF; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnF; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnF
 gi|117560001|gb|ABK36949.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 147

 Score = 35.3 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 48  GFFFYAISFFTYIMVVAHFSVRIAQTVV-TSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
           G   YA+S   ++  +    + IA  ++ TS  ++    ++  ++ EP     A+G++F+
Sbjct: 69  GVGCYALSLLCWLAALHSTPLNIAYPLLSTSYALVYLLAVNIPLFAEPLEPGKALGVLFI 128

Query: 107 MIGITLI 113
           ++G  L+
Sbjct: 129 LLGAVLV 135


>gi|187779008|ref|ZP_02995481.1| hypothetical protein CLOSPO_02603 [Clostridium sporogenes ATCC
           15579]
 gi|187772633|gb|EDU36435.1| hypothetical protein CLOSPO_02603 [Clostridium sporogenes ATCC
           15579]
          Length = 118

 Score = 35.3 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFY 96
                      G   Y  SF  +I V++   +  A  +V+   + +    S   + E   
Sbjct: 40  LSILKNIPVMAGIISYGFSFLLWIKVLSKVELSYAYPMVSLGYV-LIMIFSYFFFKENIT 98

Query: 97  WTTAIGIMFVMIGITLIS 114
               +G++ +MIG+ L++
Sbjct: 99  PIRIVGVVLIMIGVVLVA 116


>gi|187928287|ref|YP_001898774.1| small multidrug resistance protein [Ralstonia pickettii 12J]
 gi|187725177|gb|ACD26342.1| small multidrug resistance protein [Ralstonia pickettii 12J]
          Length = 123

 Score = 35.3 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAISFFTY 59
            +L  V L   + + +K  +         AD+      + +       G   Y IS   +
Sbjct: 8   LILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIVGGLSCYVISVVVW 67

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           I+ ++   V IA  +++   ++    L+  ++ E       IGI  +++G+ +++
Sbjct: 68  ILGLSRVDVTIAYPMLSLGYVVN-AFLAWYLFGEVLSVQRLIGIAIILVGVLVLA 121


>gi|330891039|gb|EGH23700.1| hypothetical protein PSYMO_20483 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 114

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ LL+   L  L  +  K ++        F            W       +    ++
Sbjct: 1   MTWLMLLSACLLTYLGQIAQKYAVEGWRE--TFPGVLAALRSMWLWRAIACLGLGPLVWL 58

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +V+    V IA  ++    + + T +   ++ EP      +GI  +++G+ 
Sbjct: 59  LVLQRMDVGIAYPMLGLNFV-LITLVGRYVFKEPVDPQHWLGIALILVGVF 108


>gi|209966985|ref|YP_002299900.1| multidrug resistance protein, SMR family [Rhodospirillum centenum
           SW]
 gi|209960451|gb|ACJ01088.1| multidrug resistance protein, SMR family [Rhodospirillum centenum
           SW]
          Length = 109

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S +F+      L   FYA SF+     +    + IA  V     I++   + ++I+ 
Sbjct: 20  LQKSEQFTRPGPILLMVLFYAGSFYFLAQALKAVPLGIAYAVWAGVGIVLTAVIGAVIFR 79

Query: 93  EPFYWTTAIGIMFVMIGITLI 113
           +       +GI  ++ G+ +I
Sbjct: 80  QMLDAAAILGIGLIVAGVVVI 100


>gi|160901360|ref|YP_001566942.1| hypothetical protein Daci_5929 [Delftia acidovorans SPH-1]
 gi|160366944|gb|ABX38557.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 115

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 18  VFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTS 77
           +  K +       P   D   +      +     Y  +   +I ++ H  + +A   +  
Sbjct: 21  LLFKKAATALPENPQIID---WVFNGWLFSSLVLYGFTTLGWIWILRHAPLHMAYPFM-G 76

Query: 78  AIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
              +I   L+ +I++EP +W T  G   +M G+ + S
Sbjct: 77  LAFLIVPTLAWVIFNEPLHWRTFAGGALIMAGVAIAS 113


>gi|154684940|ref|YP_001420101.1| YvaE [Bacillus amyloliquefaciens FZB42]
 gi|154350791|gb|ABS72870.1| YvaE [Bacillus amyloliquefaciens FZB42]
          Length = 121

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+WI L   +   VL +V +K+S               F+      L   FY  S     
Sbjct: 1   MQWIYLSLAIIFEVLGTVSMKLSN-------------GFTKLVPSILLLLFYIGSLCFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + + + SV IA  V +   I++ + +    + E F    A+ ++ ++IG+  ++F
Sbjct: 48  LTLKYISVSIAYAVWSGMGIVLISVIGIFFFHEQFSVIKAVSVLLIIIGVVSLNF 102


>gi|325674821|ref|ZP_08154508.1| DMT superfamily drug/metabolite transporter [Rhodococcus equi ATCC
           33707]
 gi|325554407|gb|EGD24082.1| DMT superfamily drug/metabolite transporter [Rhodococcus equi ATCC
           33707]
          Length = 126

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFF--YAISFFT 58
           MKW  L+  +   V++++                 S R +     W       Y  SF  
Sbjct: 6   MKWWLLVGAIVCEVVATL-----------------SLRAATDHPSWYALVVMGYVASFGF 48

Query: 59  YIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
              V+   +V +A  +  +  I I    +++I+ +        GI+ V+ G+ ++
Sbjct: 49  LSAVLRRMAVGVAYGIWGACGITITAVAAAVIFGDALTVLMGFGIVLVIAGVLVV 103


>gi|110642042|ref|YP_669772.1| multidrug efflux protein [Escherichia coli 536]
 gi|110805907|ref|YP_689427.1| multidrug efflux protein [Shigella flexneri 5 str. 8401]
 gi|117624076|ref|YP_852989.1| multidrug efflux protein [Escherichia coli APEC O1]
 gi|209919358|ref|YP_002293442.1| multidrug efflux protein [Escherichia coli SE11]
 gi|110343634|gb|ABG69871.1| EmrE methyl viologen resistance protein C [Escherichia coli 536]
 gi|110615455|gb|ABF04122.1| methylviologen resistance [Shigella flexneri 5 str. 8401]
 gi|115513200|gb|ABJ01275.1| multidrug efflux protein [Escherichia coli APEC O1]
 gi|209912617|dbj|BAG77691.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|281601377|gb|ADA74361.1| EmrE SMR transporter [Shigella flexneri 2002017]
          Length = 165

 Score = 35.3 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 81  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 140

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 141 PAIIGMMLICAGVLVINL 158


>gi|218689931|ref|YP_002398143.1| multidrug efflux protein [Escherichia coli ED1a]
 gi|218427495|emb|CAR08391.2| putative multidrug resistance protein; DLP12 prophage [Escherichia
           coli ED1a]
          Length = 170

 Score = 35.3 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 86  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 145

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 146 PAIIGMMLICAGVLVINL 163


>gi|183598832|ref|ZP_02960325.1| hypothetical protein PROSTU_02264 [Providencia stuartii ATCC 25827]
 gi|188021040|gb|EDU59080.1| hypothetical protein PROSTU_02264 [Providencia stuartii ATCC 25827]
          Length = 133

 Score = 35.3 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 46  WLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIM 104
           ++G   YA+S   ++  +    +  A  +++ + + +      L W  EP  W  A G+ 
Sbjct: 55  FVGLVCYALSMLCWLFALKSIPLNKAYPLISLSYVFVYLLAVILPWYHEPATWLKAGGVA 114

Query: 105 FVMIGITLIS 114
           F+++G+ LIS
Sbjct: 115 FIILGVWLIS 124


>gi|300854726|ref|YP_003779710.1| putative Smr family multidrug resistance protein [Clostridium
           ljungdahlii DSM 13528]
 gi|300434841|gb|ADK14608.1| predicted multidrug resistance protein, Smr family [Clostridium
           ljungdahlii DSM 13528]
          Length = 108

 Score = 35.3 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 47/118 (39%), Gaps = 13/118 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           ++WI L+  + L  + +  +KMS    +  P                    Y + F  + 
Sbjct: 2   LEWIYLIGAIILETIGTTCMKMSDGFTKLLPALGT-------------ILTYGLCFVLFS 48

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHTI 118
           + +    V +A  + ++A   I + +   I+ E       + I F+++G+  ++F  +
Sbjct: 49  ISLKKIPVSVAYAIWSAAGTTIISVIGIFIFKENISILKVLSIFFIILGVVGLNFSGV 106


>gi|85058608|ref|YP_454310.1| multidrug efflux system protein MdtJ [Sodalis glossinidius str.
           'morsitans']
 gi|123519947|sp|Q2NVC0|MDTJ_SODGM RecName: Full=Spermidine export protein mdtJ
 gi|84779128|dbj|BAE73905.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 126

 Score = 35.3 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%)

Query: 54  ISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            S+    + +   ++ +A  +     I+  T  S + +DEPF  T   G+  ++IGI ++
Sbjct: 42  ASYILLSLAIKRVALGVAYALWEGIGILFITLFSVMWFDEPFSLTKLAGLAILVIGIVML 101

Query: 114 SFHT 117
              T
Sbjct: 102 KSGT 105


>gi|195937954|ref|ZP_03083336.1| multidrug efflux protein [Escherichia coli O157:H7 str. EC4024]
          Length = 117

 Score = 35.3 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS  ++ +    
Sbjct: 33  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGLFGQRLDL 92

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 93  PAIIGMMLICAGVLVINL 110


>gi|332142524|ref|YP_004428262.1| emrE protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552546|gb|AEA99264.1| emrE protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 109

 Score = 35.3 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 49  FFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMI 108
            FFY +S   + MV+ +  + +A  + +   I + T  S + W + F     +GIM ++ 
Sbjct: 36  IFFYTVSGMLFAMVLKNMGIGVAYAIWSGMGIALITAASVVFWKQTFDIYAVLGIMLIIS 95

Query: 109 GITLISFHT 117
           G  LI+  +
Sbjct: 96  GTLLITSKS 104


>gi|312796146|ref|YP_004029068.1| Quaternary ammonium compound-resistance protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312167921|emb|CBW74924.1| Quaternary ammonium compound-resistance protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 143

 Score = 35.3 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFAD-----STRFSDGKLFWLGFFFYAISFFTYI 60
           +L+ V L   + + +K  +         A      S R +       G   Y +S   +I
Sbjct: 29  ILSGVLLNTCAQLLLKAGVNAVGHFEFSAANIVPISVRLATQWPIIGGLACYVVSVVVWI 88

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           + ++   V IA  +++     +    +  ++ E       +GI  +++G+ +++
Sbjct: 89  LGLSRVDVSIAYPMLSLG-YAVNAIAAWYLFGEVISIQRLVGIGIILLGVIVLA 141


>gi|163751660|ref|ZP_02158880.1| multidrug efflux transporter [Shewanella benthica KT99]
 gi|161328486|gb|EDP99641.1| multidrug efflux transporter [Shewanella benthica KT99]
          Length = 108

 Score = 35.3 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +               FS      L    +  +F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATD-------------GFSRPLPAALVILGHLTAFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  IG+  V  G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGLAIVTVTLLSALFYRQHLDLTAWIGMALVAAGVMMINI 102


>gi|225865279|ref|YP_002750657.1| multidrug resistance protein, Smr family [Bacillus cereus 03BB102]
 gi|225790813|gb|ACO31030.1| multidrug resistance protein, Smr family [Bacillus cereus 03BB102]
          Length = 101

 Score = 35.3 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 35/74 (47%)

Query: 44  LFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGI 103
              L F FY +SF      +    + +A  V +   I+  T +  + + E       + I
Sbjct: 12  PSILIFVFYVVSFLFLSFALKGMEMSVAYAVWSGMGIVTITTIGFIYFGESINVIKILAI 71

Query: 104 MFVMIGITLISFHT 117
           +F++IG+ +++F++
Sbjct: 72  LFILIGVVILNFNS 85


>gi|163802169|ref|ZP_02196064.1| putative multidrug transmembrane resistance signal peptide protein
           [Vibrio sp. AND4]
 gi|159173974|gb|EDP58784.1| putative multidrug transmembrane resistance signal peptide protein
           [Vibrio sp. AND4]
          Length = 127

 Score = 35.3 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 16  SSVFIKMSIIPPEAPPHFADSTRFSDGKL-FWLGFFFYAISFFTYIMVVAHFSVRIAQTV 74
           + +F+ ++II   A          S+    + + +   AIS++         S+ +A  +
Sbjct: 4   ARLFLLLAIIAEVAGTSTMSFIGESNTWEGYLVMYALIAISYYFLSKATKRISIGVAYAI 63

Query: 75  VTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
                I++ T +S +++D         G+   +IGI  ++ 
Sbjct: 64  WEGLGIVLITLVSIVLFDANLNIQQLCGLALAVIGIVCVTL 104


>gi|194364965|ref|YP_002027575.1| hypothetical protein Smal_1187 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347769|gb|ACF50892.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 119

 Score = 35.0 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 1/110 (0%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV 63
           +  L NV L     +  K +   P                  WLG   Y + F  +I  +
Sbjct: 7   LLWLVNVVLDTGGQLAFKAAASDPNEAEGLQRWKHMLSRPWLWLGIACYVLEFVAWIAFL 66

Query: 64  AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           +   +     ++ S  I+       +++ E        G++ V  G+ ++
Sbjct: 67  SLVPLSKG-VLLGSINIVALMIAGRILFREKLTPLRVTGMLLVTAGVAVV 115


>gi|148976268|ref|ZP_01812992.1| multidrug efflux transporter [Vibrionales bacterium SWAT-3]
 gi|145964362|gb|EDK29617.1| multidrug efflux transporter [Vibrionales bacterium SWAT-3]
          Length = 110

 Score = 35.0 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 11/115 (9%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  L+  V    LS V +K             D    S      L    +  +F    
Sbjct: 1   MSWFFLMMGVMAEALSHVALKA-----------TDGFSLSKPVPALLVISGHLAAFLFLS 49

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +  ++     I+  + +S+ ++ +       IG+  V  G+ LI+ 
Sbjct: 50  QAMKGMPVGVVHSLWAGLAILTVSLISTFVYSQHLDTKVWIGMGLVAAGVMLINL 104


>gi|321312907|ref|YP_004205194.1| putative metabolite-efflux transporter [Bacillus subtilis BSn5]
 gi|320019181|gb|ADV94167.1| putative metabolite-efflux transporter [Bacillus subtilis BSn5]
          Length = 119

 Score = 35.0 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 13/111 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L   +   V  +V +K+S    +  P               L  FFY  S F   
Sbjct: 1   MNWVFLCLAILFEVAGTVSMKLSSGFTKLIPSL-------------LLIFFYGGSLFFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           + +    V +A  V +   I++ T +  L + E       I I  ++ G+ 
Sbjct: 48  LTLKSIDVSVAYAVWSGMGIVLITVVGFLFFQEHVSVMKVISIGLIIAGVV 98


>gi|297180716|gb|ADI16924.1| membrane transporters of cations and cationic drugs [uncultured
           SAR406 cluster bacterium HF0010_18O13]
          Length = 107

 Score = 35.0 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%)

Query: 44  LFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGI 103
              L   FY++SF+   + V    + I     T   ++    LS   + +P    T IG+
Sbjct: 32  PTSLVIIFYSVSFYFLSVAVVKLPLTIVYASWTGLGVVSVAILSYYFYKQPLNLITIIGL 91

Query: 104 MFVMIGITLISF 115
             ++IG+ L++ 
Sbjct: 92  FMIVIGVVLVNV 103


>gi|16080410|ref|NP_391237.1| metabolite-efflux transporter [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311307|ref|ZP_03593154.1| hypothetical protein Bsubs1_18221 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315634|ref|ZP_03597439.1| hypothetical protein BsubsN3_18137 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320550|ref|ZP_03601844.1| hypothetical protein BsubsJ_18105 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324834|ref|ZP_03606128.1| hypothetical protein BsubsS_18256 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7531250|sp|O32227|YVAE_BACSU RecName: Full=Uncharacterized membrane protein yvaE
 gi|2635870|emb|CAB15362.1| putative metabolite-efflux transporter [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 119

 Score = 35.0 bits (79), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 13/111 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L   +   V  +V +K+S    +  P               L  FFY  S F   
Sbjct: 1   MNWVFLCLAILFEVAGTVSMKLSSGFTKLIPSL-------------LLIFFYGGSLFFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           + +    V +A  V +   I++ T +  L + E       I I  ++ G+ 
Sbjct: 48  LTLKSIDVSVAYAVWSGMGIVLITVVGFLFFQEHVSVMKVISIGLIIAGVV 98


>gi|220905334|ref|YP_002480646.1| small multidrug resistance protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869633|gb|ACL49968.1| small multidrug resistance protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 114

 Score = 35.0 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 35/83 (42%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S   S           Y  SFF   +V+    + ++  + +   I+I + +  + + 
Sbjct: 25  LKQSEGMSRLVPTVTALVGYGFSFFLLSLVLKVIPMGVSYGIWSGVGIVIVSIIGLVFFG 84

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +       IG+ F+++G+ +I+F
Sbjct: 85  QKLDMAACIGLGFIVVGVLVINF 107


>gi|309782214|ref|ZP_07676943.1| membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308918985|gb|EFP64653.1| membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 123

 Score = 35.0 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAISFFTY 59
            +L  V L   + + +K  +         AD+      + +       G   Y IS   +
Sbjct: 8   LILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCYVISVVVW 67

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           I+ ++   V IA  +++   ++    L+  ++ E       IGI  +++G+ +++
Sbjct: 68  ILGLSRVDVTIAYPMLSLGYVVN-AFLAWYLFGEVLSVQRLIGIAIILVGVLVLA 121


>gi|170724745|ref|YP_001758771.1| small multidrug resistance protein [Shewanella woodyi ATCC 51908]
 gi|169810092|gb|ACA84676.1| small multidrug resistance protein [Shewanella woodyi ATCC 51908]
          Length = 108

 Score = 35.0 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI L+  V    LS V +K +               F+      L    +  +F    
Sbjct: 1   MSWIFLILGVVAEALSHVALKATD-------------GFTRPLPAALVILGHLTAFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V I   +     I+  T +S+L++ +    T  IG++ V  G+ +I+ 
Sbjct: 48  QAMKGMPVGIVHALWAGLAIVTVTLMSTLLYRQHLDTTAWIGMLLVAGGVMMINL 102


>gi|309813303|ref|ZP_07707016.1| multidrug resistance protein, SMR family [Dermacoccus sp. Ellin185]
 gi|308432748|gb|EFP56667.1| multidrug resistance protein, SMR family [Dermacoccus sp. Ellin185]
          Length = 115

 Score = 35.0 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 16/113 (14%)

Query: 2   KWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           KW+ L   +   V  S+ +K ++  P                L+ L    Y  SF    +
Sbjct: 3   KWLLLAGAILSEVTGSLSLKGALDRPG---------------LYVLVAAGYIASFILLAL 47

Query: 62  VVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           V+    ++ +A  +  +  +     +SSLI+DE       +GI+ ++ G+  +
Sbjct: 48  VLRQGMALGVAYGIWGALGVATTAVMSSLIFDETLTALMGVGIVLIIAGVLTV 100


>gi|77361137|ref|YP_340712.1| quaternary ammonium compound-resistance protein (quarternary
           ammonium determinant F) [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876048|emb|CAI87270.1| Quaternary ammonium compound-resistance protein (Quarternary
           ammonium determinant F) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 108

 Score = 35.0 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L   V    +S V +K +       P                       +F    
Sbjct: 1   MSWVFLFLGVIAEAMSHVALKQTDGFTRLLPSIVVLLGHL-------------AAFVFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V I   +     I+  T LS+L++ +    +T +G+  V IGI +I+ 
Sbjct: 48  QAMKGMPVGIVHAMWAGLAIVTVTLLSTLVYKQHLDLSTWLGMALVAIGIAMINL 102


>gi|260892663|ref|YP_003238760.1| putative small multi-drug resistant family protein [Ammonifex
           degensii KC4]
 gi|260864804|gb|ACX51910.1| putative small multi-drug resistant family protein [Ammonifex
           degensii KC4]
          Length = 113

 Score = 35.0 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+     V LG L  VF+KM            D  R    +   LG   Y  SF  ++ V
Sbjct: 8   WLFAALAVILGSLGQVFLKMG--------AGHDLLRSLADRHTLLGVLLYGGSFLCWLKV 59

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           +A + +  A  V+ +    +   LS+L+  E       +G +   +G+ L+S 
Sbjct: 60  LAAWPLSRAYPVL-ALNFGLVALLSALVLGEDLGAARVLGTVLCAVGVVLVSL 111


>gi|312113118|ref|YP_004010714.1| hypothetical protein Rvan_0328 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218247|gb|ADP69615.1| protein of unknown function DUF6 transmembrane [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 142

 Score = 35.0 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 3/113 (2%)

Query: 4   IALLANVALGVLSSVFIKMSII-PPEAPPHFADSTRFSDGKLFWLG-FFFYAISFFTYIM 61
           I L+A +A   +  +  K +++  PE     + S         ++G      + FF ++M
Sbjct: 13  IGLIAAIAFDTMLQIVWKTAVVDTPEVNLSVSASFAAFFANPLFIGVIAIMTLQFFNWLM 72

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           V+    +  A+ +  S        +S L+  E F      G++ V+ G+  IS
Sbjct: 73  VLGEADLSYAKPI-ASLSFASVPIMSVLLLHENFDAVEVAGVICVIAGVFFIS 124


>gi|119896640|ref|YP_931853.1| putative small multi-drug resistant family protein [Azoarcus sp.
           BH72]
 gi|119669053|emb|CAL92966.1| putative Small Multi-Drug resistant family protein [Azoarcus sp.
           BH72]
          Length = 121

 Score = 35.0 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 8/116 (6%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADS------TRFSDGKLFWLGFFFYAISFF 57
           I  L ++AL V +   +K  +         A+             K  + GF  Y +   
Sbjct: 5   IVALLSIALSVTAQFSLKAGMASEGVRRALAEPHSLQTLLTVLTDKFVFGGFMLYGLGAV 64

Query: 58  TYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            ++ V++ + V  A  +V    ++       L   E        G+  +  G+ L+
Sbjct: 65  IWLDVLSRWDVSKAYPLVGLGFVLTLGV--GLALGEQVNAQRFAGVALICAGVFLV 118


>gi|94313510|ref|YP_586719.1| small multidrug resistance transmembrane protein [Cupriavidus
           metallidurans CH34]
 gi|93357362|gb|ABF11450.1| small multidrug resistance transmembrane protein [Cupriavidus
           metallidurans CH34]
          Length = 123

 Score = 34.6 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 6   LLANVALGVLSSVFIK-----MSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           +   V L   + + +K     +  I  +    F  + R         G   Y +S   +I
Sbjct: 9   IFTGVLLNACAQLLLKAGVNAVGAITIDRATLFTTAFRVLTQWPVIGGLTLYVVSVAVWI 68

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           + ++   V IA  +++   ++     +  ++ E        GI+ ++ G+ LI+
Sbjct: 69  VGLSRVDVSIAYPMLSLGYVVN-ALAAWWLFGEMIGPLRVAGILLILAGVFLIA 121


>gi|32266008|ref|NP_860040.1| efflux protein [Helicobacter hepaticus ATCC 51449]
 gi|32262057|gb|AAP77106.1| predicted efflux protein [Helicobacter hepaticus ATCC 51449]
          Length = 118

 Score = 34.6 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%)

Query: 43  KLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIG 102
                 +    +S++   + +   SV +A  +      I   C+S   + E   +   IG
Sbjct: 32  WGLMCMYVLLVLSYYFMALSLKRISVGVAYAIWEVLGAICVVCISVFYFGEEISFIQKIG 91

Query: 103 IMFVMIGITLISFHTI 118
           I+  + GI LI++  I
Sbjct: 92  IVLSISGIALINYAEI 107


>gi|163841151|ref|YP_001625556.1| quaternary ammonium compound-resistance protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954627|gb|ABY24142.1| quaternary ammonium compound-resistance protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 92

 Score = 34.6 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 30/78 (38%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            FS           YAISF+   + +    V  A  + +     +   +   ++ EP   
Sbjct: 11  GFSKLWPSVGVVVGYAISFYALSLALKEVPVSTAYAIWSGVGTAVIAVIGFWLFKEPLSV 70

Query: 98  TTAIGIMFVMIGITLISF 115
           T  IGI  ++ G+  ++ 
Sbjct: 71  TKIIGITLIVAGVVALNL 88


>gi|323968668|gb|EGB64073.1| small Multidrug Resistance protein [Escherichia coli M863]
 gi|323978262|gb|EGB73348.1| small Multidrug Resistance protein [Escherichia coli TW10509]
 gi|327252715|gb|EGE64369.1| multidrug resistance protein ebrB [Escherichia coli STEC_7v]
          Length = 121

 Score = 34.6 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L   +A  +  ++ +K + +                   F L     ++S+      
Sbjct: 5   WILLGLAIATEITGTLSMKWASVSE-------------GNGGFILMLVMISLSYIFLSFA 51

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I++ T  S L++DE        G+  ++ GI LI   T
Sbjct: 52  VKKIALGVAYALWEGIGILLITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 106


>gi|260433738|ref|ZP_05787709.1| multidrug transporter EmrE [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417566|gb|EEX10825.1| multidrug transporter EmrE [Silicibacter lacuscaerulensis ITI-1157]
          Length = 111

 Score = 34.6 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 33/83 (39%)

Query: 31  PHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLI 90
                S +F+      L    Y ++F+   + +    V I   + +   I +   +  ++
Sbjct: 20  TALQASQQFTRFWPSVLVVVGYGVAFYLMALTLKVMPVGIVYAIWSGLGITLIALIGFVV 79

Query: 91  WDEPFYWTTAIGIMFVMIGITLI 113
           + +   W   +G+  ++ GI +I
Sbjct: 80  FGQRLDWPAVLGLAMILGGILVI 102


>gi|308185444|ref|YP_003929576.1| small multidrug resistance protein [Pantoea vagans C9-1]
 gi|308055724|gb|ADO07894.1| Small multidrug resistance protein [Pantoea vagans C9-1]
          Length = 121

 Score = 34.6 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 37  TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVT-SAIIIIATCLSSLIWDEPF 95
                  L   G   Y +S   +I  + +F +     +++ S +++    +   ++ E F
Sbjct: 40  VAILPALLLVAGLGAYGVSMLCWIRALHYFPLNRVYPLLSLSYVLVWLVAVCVPVFHEAF 99

Query: 96  YWTTAIGIMFVMIGITLISFH 116
            W +  G+  ++IG+  I   
Sbjct: 100 SWHSLAGVAIIVIGLLCIVVK 120


>gi|300777155|ref|ZP_07087013.1| DMT superfamily multidrug transporter EmrE [Chryseobacterium gleum
           ATCC 35910]
 gi|300502665|gb|EFK33805.1| DMT superfamily multidrug transporter EmrE [Chryseobacterium gleum
           ATCC 35910]
          Length = 152

 Score = 34.6 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%)

Query: 39  FSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWT 98
           FS      +    YA +F+   + +    V I   + +   I+  T +  + + +     
Sbjct: 69  FSRLWPSVVTVIGYACAFYFLSLTLRQIPVGITYAIWSGVGIVFITIIGVIAFKQVPDLP 128

Query: 99  TAIGIMFVMIGITLISF 115
             IGI  +++G+ +I+ 
Sbjct: 129 AIIGIALIVLGVIIINV 145


>gi|291295194|ref|YP_003506592.1| small multidrug resistance protein [Meiothermus ruber DSM 1279]
 gi|290470153|gb|ADD27572.1| small multidrug resistance protein [Meiothermus ruber DSM 1279]
          Length = 109

 Score = 34.6 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+ L+  +   V+ S  +K S    +  P                    Y ++F+   + 
Sbjct: 4   WLLLMIAIVSEVIGSTALKASQGFSKLLPSLVVVLG-------------YGLAFYFLSLS 50

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           +    + IA  V +     +   L   +  EP     A+GI+ ++ G+ +++ 
Sbjct: 51  LKTIPLNIAYAVWSGLGTALIALLGWWVLKEPMNGAIALGILLIIAGVVVLNL 103


>gi|119485186|ref|ZP_01619571.1| hypothetical protein L8106_07049 [Lyngbya sp. PCC 8106]
 gi|119457414|gb|EAW38539.1| hypothetical protein L8106_07049 [Lyngbya sp. PCC 8106]
          Length = 116

 Score = 34.6 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
           F  G   Y I+   +   +    V +A  V       +        + E       IG+ 
Sbjct: 46  FLAGLGVYGINVILFAKALEKLPVSVAYPVFAGIGFSLIAVAGGWFFGERLEINQWIGLG 105

Query: 105 FVMIGITLIS 114
            ++ GI ++S
Sbjct: 106 MILAGIIIMS 115


>gi|83719484|ref|YP_443025.1| SMR family multidrug efflux pump [Burkholderia thailandensis E264]
 gi|167582020|ref|ZP_02374894.1| multidrug resistance protein, SMR family [Burkholderia
           thailandensis TXDOH]
 gi|167620186|ref|ZP_02388817.1| multidrug resistance protein, SMR family [Burkholderia
           thailandensis Bt4]
 gi|257139254|ref|ZP_05587516.1| SMR family multidrug efflux pump [Burkholderia thailandensis E264]
 gi|83653309|gb|ABC37372.1| multidrug resistance protein, SMR family [Burkholderia
           thailandensis E264]
          Length = 112

 Score = 34.6 bits (78), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 35/78 (44%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      +    Y  +F+   + +    V I   + + A I++ T ++ +++ +   W
Sbjct: 28  GFTRLWPTLVVAAGYGTAFYCLSLTLRSMPVGIVYAIWSGAGIVLITLVAVVLYRQVPDW 87

Query: 98  TTAIGIMFVMIGITLISF 115
              +G+  ++ G+ +++ 
Sbjct: 88  PAIVGLALIISGVAVLNL 105


>gi|294142714|ref|YP_003558692.1| multidrug efflux transporter [Shewanella violacea DSS12]
 gi|293329183|dbj|BAJ03914.1| multidrug efflux transporter [Shewanella violacea DSS12]
          Length = 108

 Score = 34.6 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +               FS      +    + ++F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATD-------------GFSKPLPAVMVIVGHLVAFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS++ + +    T  IG+  V  G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGLAIVTVTLLSAVFYRQHLDLTAWIGMGLVAAGVMMINI 102


>gi|229088050|ref|ZP_04220105.1| hypothetical protein bcere0022_45600 [Bacillus cereus Rock3-44]
 gi|228695252|gb|EEL48182.1| hypothetical protein bcere0022_45600 [Bacillus cereus Rock3-44]
          Length = 109

 Score = 34.6 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 31/63 (49%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +A +FF     + H  +  A  + +     +   +  LIW + F W TA+GI  ++ G+ 
Sbjct: 40  FASAFFFLSKSLQHIQLSTAYAIWSGVGTALTALIGVLIWKDVFTWQTALGIALIIGGVI 99

Query: 112 LIS 114
           +++
Sbjct: 100 VLN 102


>gi|197284927|ref|YP_002150799.1| hypothetical protein PMI1049 [Proteus mirabilis HI4320]
 gi|227355330|ref|ZP_03839731.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
 gi|257096134|sp|B4ETM1|ARNF_PROMH RecName: Full=Probable
           4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
           subunit ArnF; Short=L-Ara4N-phosphoundecaprenol flippase
           subunit ArnF; AltName: Full=Undecaprenyl
           phosphate-aminoarabinose flippase subunit ArnF
 gi|194682414|emb|CAR42276.1| putative membrane protein [Proteus mirabilis HI4320]
 gi|227164554|gb|EEI49425.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
          Length = 133

 Score = 34.6 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 46  WLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW-DEPFYWTTAIGIM 104
           ++G   Y +S   +++ +    +  A  +++ + + +      L W  E   W+  IGI+
Sbjct: 55  FVGLIGYVLSMVCWLLTLRTIPLNKAYPLISLSYVFVYILAVVLPWFQETLSWSKTIGII 114

Query: 105 FVMIGITLISFHT 117
           F+M+G+ LIS  T
Sbjct: 115 FIMLGVWLISQKT 127


>gi|190573421|ref|YP_001971266.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190011343|emb|CAQ44958.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 119

 Score = 34.6 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV 63
           +  LANV L     +  K +   P+                 W+G   Y + F  +I  +
Sbjct: 7   LLWLANVVLDTGGQLAFKAAASDPQEGEGLQRWKHMLSRPWLWIGIACYVLEFVAWIAFL 66

Query: 64  AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           +   +     ++ S  I+        ++ E        G++ V  G+ ++
Sbjct: 67  SLVPLSKG-VLLGSINIVALMIAGRFLFREKLTPLRVTGMLLVTAGVAVV 115


>gi|149191243|ref|ZP_01869499.1| hypothetical protein VSAK1_04197 [Vibrio shilonii AK1]
 gi|148834913|gb|EDL51894.1| hypothetical protein VSAK1_04197 [Vibrio shilonii AK1]
          Length = 115

 Score = 34.6 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M  +  + +V    LS  + K + +  E  P  + +          LG  F   S  T++
Sbjct: 1   MTVLLFVLSVVASSLSQYWQKRAAMYFEENPQLS-AVGKLLSFPMILGIVFLGTSALTWL 59

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            V++ + V +A  +++   +I+   +S   + E       +G+M +MIG+ ++
Sbjct: 60  GVLSQWDVSVAYPLLSVNFVIML-LVSKFAFGEVILPKQWLGVMCIMIGVGIL 111


>gi|325689901|gb|EGD31905.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK115]
 gi|325696862|gb|EGD38750.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK160]
 gi|327459813|gb|EGF06153.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1057]
          Length = 108

 Score = 34.6 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
           L   FY + FF   + +    + +A  + +   ++  T LS L+W E     + +GI  V
Sbjct: 35  LALTFYGLCFFFLSLSLKGIQLNLAYAIWSGIGLVGTTILSILLWHEKVTAVSLLGISLV 94

Query: 107 MIGITLISF 115
           ++G+ L++ 
Sbjct: 95  IVGLVLLNL 103


>gi|294635684|ref|ZP_06714156.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
 gi|291090965|gb|EFE23526.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
          Length = 127

 Score = 34.6 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 53/114 (46%), Gaps = 3/114 (2%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWL--GFFFYAISFFTYI 60
           ++  LA+V L   + + ++ +++       F  +     G ++WL  G   YA+S   ++
Sbjct: 4   YLWALASVILVSAAQLMMRYTMMQVGDWSMFLTALLTGAGWVWWLPAGILCYALSMLCWL 63

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSL-IWDEPFYWTTAIGIMFVMIGITLI 113
             +    +  A  +++ + +++      L ++DE       +G+  +++G+ +I
Sbjct: 64  FALRRLPLNQAYPLLSLSYVLVCALAIGLPLFDERLNLGKLLGMALIVMGLLVI 117


>gi|281491664|ref|YP_003353644.1| Smr family quaternary ammonium compound efflux protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375382|gb|ADA64895.1| Quaternary ammonium compound efflux protein, Smr family
           [Lactococcus lactis subsp. lactis KF147]
          Length = 109

 Score = 34.6 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 35/79 (44%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           + ++ F     V +  + IA  +  +  II+ T +S  +  E    
Sbjct: 27  GFTKPLPSIFCMALFGLAIFMLSKTVNYIPLYIAYALWGALGIILVTLISIFVMKESVNI 86

Query: 98  TTAIGIMFVMIGITLISFH 116
            T +G+ F++IG+ L++ +
Sbjct: 87  ATILGLFFIVIGVVLVNIY 105


>gi|167562873|ref|ZP_02355789.1| multidrug resistance protein, SMR family [Burkholderia oklahomensis
           EO147]
 gi|167570059|ref|ZP_02362933.1| multidrug resistance protein, SMR family [Burkholderia oklahomensis
           C6786]
          Length = 112

 Score = 34.6 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 35/78 (44%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      +    Y  +F+   + +    V I   + + A I++ T ++ +++ +   W
Sbjct: 28  GFTRLWPTLVVAAGYGTAFYCLSLTLKSMPVGIVYAIWSGAGIVLITLVAVVLYRQVPDW 87

Query: 98  TTAIGIMFVMIGITLISF 115
              +G+  ++ G+ +++ 
Sbjct: 88  PAVVGLALIVSGVAVLNL 105


>gi|312945718|gb|ADR26545.1| multidrug efflux protein [Escherichia coli O83:H1 str. NRG 857C]
          Length = 117

 Score = 34.6 bits (78), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 33  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 92

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 93  PAIIGMMLICAGVLVINL 110


>gi|229020210|ref|ZP_04176983.1| small multidrug resistance protein [Bacillus cereus AH1273]
 gi|229026437|ref|ZP_04182794.1| small multidrug resistance protein [Bacillus cereus AH1272]
 gi|228734900|gb|EEL85538.1| small multidrug resistance protein [Bacillus cereus AH1272]
 gi|228741106|gb|EEL91331.1| small multidrug resistance protein [Bacillus cereus AH1273]
          Length = 111

 Score = 34.6 bits (78), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 30/64 (46%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           +A +FF     + H  +  A  +       +   +   +W++ F W TA G++ ++ G+ 
Sbjct: 42  FATAFFFLSKALQHMQLSTAYAIWAGVGTALTALIGVFVWEDAFTWQTAAGLILIIGGVV 101

Query: 112 LISF 115
           +++ 
Sbjct: 102 VLNL 105


>gi|241662860|ref|YP_002981220.1| small multidrug resistance transmembrane protein [Ralstonia
           pickettii 12D]
 gi|240864887|gb|ACS62548.1| putative small multidrug resistance transmembrane protein
           [Ralstonia pickettii 12D]
          Length = 123

 Score = 34.6 bits (78), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAISFFTY 59
            +L  V L   + + +K  +         AD+      + +       G   Y IS   +
Sbjct: 8   LILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCYVISVVVW 67

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           I+ ++   V IA  +++   ++    L+  ++ E       IGI  +++G+ +++
Sbjct: 68  ILGLSRVDVTIAYPMLSLGYVVN-AFLAWYLFGEVLTVQRLIGIAIILVGVLVLA 121


>gi|42523246|ref|NP_968626.1| putative multidrug efflux transporter [Bdellovibrio bacteriovorus
           HD100]
 gi|39575451|emb|CAE79619.1| putative multidrug efflux transporter [Bdellovibrio bacteriovorus
           HD100]
          Length = 145

 Score = 34.6 bits (78), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L A +   V  ++ +K S               F+      L    + I F +  
Sbjct: 1   MAYVYLAAAIIFEVFGTITMKYSE-------------GFTKVLPSVLTVACHGICFISLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + + +  V     +       +   L  +I++EP      +    ++ G+ +++ 
Sbjct: 48  VALKYLPVSNVYAIWAGVGTALMAFLGLVIFNEPLPLQKVVATTLIIAGVVILNL 102


>gi|307824322|ref|ZP_07654548.1| protein of unknown function DUF6 transmembrane [Methylobacter
           tundripaludum SV96]
 gi|307734702|gb|EFO05553.1| protein of unknown function DUF6 transmembrane [Methylobacter
           tundripaludum SV96]
          Length = 123

 Score = 34.6 bits (78), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEA-----PPHFADSTRFSDGKLFWLGFFFYAISFFTY 59
            +L  V L  ++ + +K S+    A             R +     W G   Y IS   +
Sbjct: 8   IILTGVLLNAVAQLALKASVREMGAIGLNFSSSATAFLRLACEPFLWAGLVCYGISVVVW 67

Query: 60  IMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           I+ ++   V IA  +++   ++     +  ++ E       IG+  V++G+ +++
Sbjct: 68  ILALSRVDVSIAYPMLSMGYVVN-AFFAWQLFGESMNPARLIGMGIVLLGVYVLA 121


>gi|227885637|ref|ZP_04003442.1| multidrug efflux protein [Escherichia coli 83972]
 gi|300904824|ref|ZP_07122650.1| multidrug transporter EmrE [Escherichia coli MS 84-1]
 gi|300920153|ref|ZP_07136603.1| multidrug transporter EmrE [Escherichia coli MS 115-1]
 gi|300923903|ref|ZP_07139918.1| multidrug transporter EmrE [Escherichia coli MS 182-1]
 gi|300931146|ref|ZP_07146494.1| multidrug transporter EmrE [Escherichia coli MS 187-1]
 gi|300940389|ref|ZP_07154974.1| multidrug transporter EmrE [Escherichia coli MS 21-1]
 gi|300975552|ref|ZP_07173063.1| multidrug transporter EmrE [Escherichia coli MS 45-1]
 gi|300994338|ref|ZP_07180869.1| multidrug transporter EmrE [Escherichia coli MS 200-1]
 gi|301050706|ref|ZP_07197567.1| multidrug transporter EmrE [Escherichia coli MS 185-1]
 gi|301305277|ref|ZP_07211374.1| multidrug transporter EmrE [Escherichia coli MS 124-1]
 gi|301644607|ref|ZP_07244596.1| multidrug transporter EmrE [Escherichia coli MS 146-1]
 gi|222033675|emb|CAP76416.1| Multidrug transporter emrE [Escherichia coli LF82]
 gi|227837210|gb|EEJ47676.1| multidrug efflux protein [Escherichia coli 83972]
 gi|300297629|gb|EFJ54014.1| multidrug transporter EmrE [Escherichia coli MS 185-1]
 gi|300304924|gb|EFJ59444.1| multidrug transporter EmrE [Escherichia coli MS 200-1]
 gi|300403251|gb|EFJ86789.1| multidrug transporter EmrE [Escherichia coli MS 84-1]
 gi|300410321|gb|EFJ93859.1| multidrug transporter EmrE [Escherichia coli MS 45-1]
 gi|300412810|gb|EFJ96120.1| multidrug transporter EmrE [Escherichia coli MS 115-1]
 gi|300419866|gb|EFK03177.1| multidrug transporter EmrE [Escherichia coli MS 182-1]
 gi|300454783|gb|EFK18276.1| multidrug transporter EmrE [Escherichia coli MS 21-1]
 gi|300461025|gb|EFK24518.1| multidrug transporter EmrE [Escherichia coli MS 187-1]
 gi|300839483|gb|EFK67243.1| multidrug transporter EmrE [Escherichia coli MS 124-1]
 gi|301077082|gb|EFK91888.1| multidrug transporter EmrE [Escherichia coli MS 146-1]
 gi|315257234|gb|EFU37202.1| multidrug transporter EmrE [Escherichia coli MS 85-1]
 gi|315286646|gb|EFU46079.1| multidrug transporter EmrE [Escherichia coli MS 110-3]
 gi|315290251|gb|EFU49629.1| multidrug transporter EmrE [Escherichia coli MS 153-1]
 gi|315296468|gb|EFU55765.1| multidrug transporter EmrE [Escherichia coli MS 16-3]
 gi|324005867|gb|EGB75086.1| multidrug transporter EmrE [Escherichia coli MS 57-2]
 gi|324013489|gb|EGB82708.1| multidrug transporter EmrE [Escherichia coli MS 60-1]
 gi|324018867|gb|EGB88086.1| multidrug transporter EmrE [Escherichia coli MS 117-3]
          Length = 117

 Score = 34.2 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 33  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 92

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 93  PAIIGMMLICAGVLVINL 110


>gi|291485856|dbj|BAI86931.1| hypothetical protein BSNT_05013 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 119

 Score = 34.2 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 13/111 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ L   +   V  +V +K+S    +  P               L  FFY  S F   
Sbjct: 1   MNWVFLCLAILFEVAGTVSMKLSSGFTKLIPSL-------------LLIFFYGGSLFFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           + +    V +A  V +   I++ T +    + E       I I  ++ G+ 
Sbjct: 48  LTLKSIDVSVAYAVWSGMGIVLITVIGFWFFQEHVSVMKVISIGLIIAGVV 98


>gi|282898973|ref|ZP_06306955.1| hypothetical protein CRC_00251 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196113|gb|EFA71028.1| hypothetical protein CRC_00251 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 122

 Score = 34.2 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 45  FWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIM 104
             LG   Y +    YI+++   ++ IA   V+   I     +  L++ E       +G+ 
Sbjct: 51  LLLGLACYGVGAIAYILLLTRVNLSIAGPAVSVGYIFSV-MIGLLVFKESMPLIRILGLG 109

Query: 105 FVMIGITLI 113
           F++ G+ L+
Sbjct: 110 FIVTGVILL 118


>gi|307352533|ref|YP_003893584.1| small multidrug resistance protein [Methanoplanus petrolearius DSM
           11571]
 gi|307155766|gb|ADN35146.1| small multidrug resistance protein [Methanoplanus petrolearius DSM
           11571]
          Length = 110

 Score = 34.2 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M+W+ L   + + +  S  +K+S               FS+     L F F+ ISF  +I
Sbjct: 2   MRWLLLATGILMELAGSTCMKLSD-------------GFSNIYASILTFVFWGISFTVFI 48

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             + HF +  A  +     I++ + +  L + EP      + I+ ++ G+ +++ 
Sbjct: 49  FALKHFDLSFAYAIWAGMGILLVSMIGILYFKEPASSMKVLSIIVIVAGVIMLNL 103


>gi|311693849|gb|ADP96722.1| small multidrug resistance protein [marine bacterium HP15]
          Length = 110

 Score = 34.2 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 35/87 (40%)

Query: 29  APPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSS 88
           A      S  F+      L    Y I+F+   + +    V +A  +     +++   +  
Sbjct: 17  ATTGLKASEGFTRLWPSLLVIAGYTIAFYFLSLTLKEIPVGVAYAIWAGMGVVLVALIGW 76

Query: 89  LIWDEPFYWTTAIGIMFVMIGITLISF 115
           LI+ +     T IG+  ++ G+ +I+ 
Sbjct: 77  LIYGQALDAATVIGMALIITGVAVINL 103


>gi|296807126|ref|XP_002844179.1| solute carrier family 12 member 3 [Arthroderma otae CBS 113480]
 gi|238843662|gb|EEQ33324.1| solute carrier family 12 member 3 [Arthroderma otae CBS 113480]
          Length = 1167

 Score = 34.2 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 6/111 (5%)

Query: 7   LANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHF 66
           L  +     S +F   S+      P  +       G    L F  Y +  FT    V   
Sbjct: 285 LFGILFPATSGIFAGTSMSGDLKNPSRSIPKGTLYG--LALTFATYTVVIFTLAASVTRE 342

Query: 67  SV----RIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           S+     I Q    S  +I+    S+  +        A  ++  +    L+
Sbjct: 343 SLYKDVNIIQDTSISGSLIVLGEFSTSFFSSLMGIIGAAKVLQAISRDALL 393


>gi|320665033|gb|EFX32139.1| multidrug efflux protein [Escherichia coli O157:H7 str. LSU-61]
          Length = 110

 Score = 34.2 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS  ++ +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGVFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAVIGMMLICAGVLVINL 103


>gi|1848269|gb|AAB47993.1| quaternary ammonium compounds resistance protein Qac
           [Staphylococcus aureus]
          Length = 107

 Score = 34.2 bits (77), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           + I F+     + +  + I+        +++ T +S +I+ E    
Sbjct: 25  GFTKLWPTLGTLISFGICFYFLSTAMKYLPLNISYATWAGLGLVLTTLVSVIIFKENINL 84

Query: 98  TTAIGIMFVMIGITLISF 115
            +   I  ++IG+ L++ 
Sbjct: 85  ISIFSITLIIIGVVLLNV 102


>gi|50121906|ref|YP_051073.1| multidrug efflux protein [Pectobacterium atrosepticum SCRI1043]
 gi|49612432|emb|CAG75882.1| putative multidrug resistance protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 110

 Score = 34.2 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            FS           YA +F+     +AH    IA  + + A I++ + L  L+  +    
Sbjct: 26  GFSRLWPSVGTISCYAAAFYLLAQTLAHIPTGIAYAIWSGAGIVLISLLGWLVSGQKLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              +G+  +  G+ +I+ 
Sbjct: 86  PAILGMGLICAGVLVINI 103


>gi|319783041|ref|YP_004142517.1| hypothetical protein Mesci_3344 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168929|gb|ADV12467.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 149

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 9/121 (7%)

Query: 1   MKWIALLA-NVALGVLSSVFIKMSIIPPEAPPHFA--DSTRFSDGKLF----WLGFFFYA 53
           MK+I  +   V     + + +K  ++    P  F   +        +F    +LG   + 
Sbjct: 1   MKYIVFILFTVMTNAAAQLMLKQGMMSLG-PISFEGVNPLVKLLQIVFSPWVFLGLCTFV 59

Query: 54  ISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           IS  +++ V++   +  A   ++ A +      +  ++ E        GI F+ +G  LI
Sbjct: 60  ISMASHLYVLSKVELSFAYPFLSLAYVA-VAIFAYFVFREDLNGWRVAGIAFICVGTVLI 118

Query: 114 S 114
           +
Sbjct: 119 A 119


>gi|126737799|ref|ZP_01753529.1| multidrug resistance efflux protein, SMR family [Roseobacter sp.
           SK209-2-6]
 gi|126721192|gb|EBA17896.1| multidrug resistance efflux protein, SMR family [Roseobacter sp.
           SK209-2-6]
          Length = 111

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 33/82 (40%)

Query: 32  HFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIW 91
               S +F+      L    Y  SF+   + +    V I   + +   ++    +  +++
Sbjct: 21  ALQASQQFTKFWPSVLVLLAYGFSFYMMGLTLKFMPVGIVYAIWSGLGVVCIALIGLIVF 80

Query: 92  DEPFYWTTAIGIMFVMIGITLI 113
            +   W   +G+  +++G+ +I
Sbjct: 81  GQRLDWPAILGLALIILGVLVI 102


>gi|307130062|ref|YP_003882078.1| Quaternary ammonium compound-resistance protein [Dickeya dadantii
           3937]
 gi|306527591|gb|ADM97521.1| Quaternary ammonium compound-resistance protein [Dickeya dadantii
           3937]
          Length = 109

 Score = 34.2 bits (77), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M ++ L   +   V+++  +K+S       P               +   FYAI+F+   
Sbjct: 1   MTYLFLCLAIVSEVVATTALKLSESFTRPVPSI-------------VTLVFYAIAFYCLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + +      +   + + A I++   +S + +D+   W   +G+  ++ G+ +I+ 
Sbjct: 48  ISMRVLPTGVIYAIWSGAGIVLIAAISWIFYDQRLDWPAVLGMALIIAGVAVINL 102


>gi|212634933|ref|YP_002311458.1| Small multidrug resistance protein [Shewanella piezotolerans WP3]
 gi|212556417|gb|ACJ28871.1| Small multidrug resistance protein [Shewanella piezotolerans WP3]
          Length = 108

 Score = 34.2 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI LL  V    LS V +K +               FS      +    +  +F    
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATD-------------GFSKPLPAAMVILGHLTAFIFLG 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
             +    V +   +     I+  T LS+L + +    T  +G+  V  G+ +I+ 
Sbjct: 48  QAMKGMPVGVVHALWAGLAIVTVTLLSALFYRQHLDLTAWVGMGLVAAGVIMINL 102


>gi|324993114|gb|EGC25034.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK405]
 gi|324995582|gb|EGC27494.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK678]
 gi|325694302|gb|EGD36216.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK150]
 gi|327461380|gb|EGF07711.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1]
 gi|327489238|gb|EGF21031.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1058]
          Length = 108

 Score = 34.2 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
           L   FY + FF   + +    + +A  + ++  ++  T LS L+W E     + +GI  V
Sbjct: 35  LALMFYGLCFFFLSLSLKGIQLNLAYAIWSAIGLVGTTILSILLWHEKVTAVSLLGISLV 94

Query: 107 MIGITLISF 115
           ++G+ L++ 
Sbjct: 95  IVGLVLLNL 103


>gi|170768907|ref|ZP_02903360.1| EmrE protein [Escherichia albertii TW07627]
 gi|170122455|gb|EDS91386.1| EmrE protein [Escherichia albertii TW07627]
          Length = 110

 Score = 34.2 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS  I+ +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIANAIWSGVGIVLISLLSWGIFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAIIGMMLICAGVLVINL 103


>gi|170768711|ref|ZP_02903164.1| multidrug resistance protein MdtJ [Escherichia albertii TW07627]
 gi|170122259|gb|EDS91190.1| multidrug resistance protein MdtJ [Escherichia albertii TW07627]
          Length = 121

 Score = 34.2 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+ L   +A  +  ++ +K + +                   F L     ++S+      
Sbjct: 5   WLLLGLAIATEITGTLSMKWASVSE-------------GNGGFILMLVMISLSYIFLSFA 51

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I+  T  S L++DE        G+  ++ GI LI   T
Sbjct: 52  VKKIALGVAYALWEGIGILFITIFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 106


>gi|255325774|ref|ZP_05366868.1| multidrug resistance protein EbrB [Corynebacterium
           tuberculostearicum SK141]
 gi|255297185|gb|EET76508.1| multidrug resistance protein EbrB [Corynebacterium
           tuberculostearicum SK141]
          Length = 105

 Score = 34.2 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 48/113 (42%), Gaps = 12/113 (10%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W  L    A+ V  ++ ++MS +                  +  +   + +   F  +
Sbjct: 1   MIWFLLFLATAIEVSGTLCLRMSAVTGRRF------------WVVLVALCYVSAYGFLAL 48

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           ++ A   + +A  +  +  + +    S L++ EPF W  ++G++ ++ G+ L+
Sbjct: 49  VLKAGMDLGVAYGIWAATGVALTAIASYLLFKEPFTWLKSLGVVLIVGGVLLV 101


>gi|260459638|ref|ZP_05807892.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034440|gb|EEW35697.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 143

 Score = 34.2 bits (77), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 1   MKWIALLA-NVALGVLSSVFIKMSIIP------PEAPPHFADSTRFSDGKLFWLGFFFYA 53
           MK+I  +   V     + + +K  ++         A P            +F LG   + 
Sbjct: 1   MKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGANPLVKLLQIVFSPWVF-LGLCTFV 59

Query: 54  ISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           IS  +++ V++   +  A   ++ A +      +  ++ E        GI F+ +G  LI
Sbjct: 60  ISMASHLYVLSKVELSFAYPFLSLAYVA-VAIFAYFVFREDLNGWRIAGIAFICVGTVLI 118

Query: 114 S 114
           +
Sbjct: 119 A 119


>gi|168757669|ref|ZP_02782676.1| EmrE protein [Escherichia coli O157:H7 str. EC4401]
 gi|168771560|ref|ZP_02796567.1| EmrE protein [Escherichia coli O157:H7 str. EC4486]
 gi|168777328|ref|ZP_02802335.1| EmrE protein [Escherichia coli O157:H7 str. EC4196]
 gi|168802679|ref|ZP_02827686.1| EmrE protein [Escherichia coli O157:H7 str. EC508]
 gi|188025024|ref|ZP_02775489.2| EmrE protein [Escherichia coli O157:H7 str. EC4113]
 gi|189010683|ref|ZP_02808672.2| EmrE protein [Escherichia coli O157:H7 str. EC4076]
 gi|191166585|ref|ZP_03028414.1| EmrE protein [Escherichia coli B7A]
 gi|208806532|ref|ZP_03248869.1| EmrE protein [Escherichia coli O157:H7 str. EC4206]
 gi|208814298|ref|ZP_03255627.1| EmrE protein [Escherichia coli O157:H7 str. EC4045]
 gi|208820946|ref|ZP_03261266.1| EmrE protein [Escherichia coli O157:H7 str. EC4042]
 gi|209400746|ref|YP_002271509.1| EmrE protein [Escherichia coli O157:H7 str. EC4115]
 gi|254793994|ref|YP_003078831.1| multidrug efflux protein [Escherichia coli O157:H7 str. TW14359]
 gi|291281465|ref|YP_003498283.1| EmrE SMR transporter [Escherichia coli O55:H7 str. CB9615]
 gi|187767438|gb|EDU31282.1| EmrE protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015336|gb|EDU53458.1| EmrE protein [Escherichia coli O157:H7 str. EC4113]
 gi|188999029|gb|EDU68015.1| EmrE protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355350|gb|EDU73769.1| EmrE protein [Escherichia coli O157:H7 str. EC4401]
 gi|189359674|gb|EDU78093.1| EmrE protein [Escherichia coli O157:H7 str. EC4486]
 gi|189375379|gb|EDU93795.1| EmrE protein [Escherichia coli O157:H7 str. EC508]
 gi|190903390|gb|EDV63110.1| EmrE protein [Escherichia coli B7A]
 gi|208726333|gb|EDZ75934.1| EmrE protein [Escherichia coli O157:H7 str. EC4206]
 gi|208735575|gb|EDZ84262.1| EmrE protein [Escherichia coli O157:H7 str. EC4045]
 gi|208741069|gb|EDZ88751.1| EmrE protein [Escherichia coli O157:H7 str. EC4042]
 gi|209162146|gb|ACI39579.1| EmrE protein [Escherichia coli O157:H7 str. EC4115]
 gi|254593394|gb|ACT72755.1| EmrE SMR transporter [Escherichia coli O157:H7 str. TW14359]
 gi|290761338|gb|ADD55299.1| EmrE SMR transporter [Escherichia coli O55:H7 str. CB9615]
 gi|320199129|gb|EFW73724.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli EC4100B]
 gi|323938502|gb|EGB34753.1| small Multidrug Resistance protein [Escherichia coli E1520]
 gi|325497841|gb|EGC95700.1| hypothetical protein ECD227_1938 [Escherichia fergusonii ECD227]
 gi|326339448|gb|EGD63259.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli O157:H7 str. 1125]
          Length = 110

 Score = 34.2 bits (77), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS  ++ +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGLFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAIIGMMLICAGVLVINL 103


>gi|291302429|ref|YP_003513707.1| small multidrug resistance protein [Stackebrandtia nassauensis DSM
           44728]
 gi|290571649|gb|ADD44614.1| small multidrug resistance protein [Stackebrandtia nassauensis DSM
           44728]
          Length = 109

 Score = 33.8 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 52  YAISFFTYIMVVAH-FSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGI 110
           Y  +F     V+A    V +A  V  ++ + +   L  +I+ +P  W  A GI  ++ G+
Sbjct: 39  YVGAFSLLGAVLAQGMPVGVAYGVWAASGVALTAVLGRVIFRDPLTWVMAAGIALIIGGV 98

Query: 111 TLI 113
            ++
Sbjct: 99  MVV 101


>gi|120612964|ref|YP_972642.1| hypothetical protein Aave_4328 [Acidovorax citrulli AAC00-1]
 gi|120591428|gb|ABM34868.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
          Length = 128

 Score = 33.8 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 2/111 (1%)

Query: 4   IALLANVALGVLSSVFIKMSIIP-PEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           +  L N+ +     +  K +    P A    A     +     W+G   Y   F  ++  
Sbjct: 15  LLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVGIGCYVAEFLVWLAF 74

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           ++   +     ++ S  I+        ++ E        GI+ V  G+ ++
Sbjct: 75  LSLVPLSDG-VLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAGVAVV 124


>gi|88800946|ref|ZP_01116498.1| multidrug resistance protein [Reinekea sp. MED297]
 gi|88776321|gb|EAR07544.1| multidrug resistance protein [Reinekea sp. MED297]
          Length = 109

 Score = 33.8 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M W+ LL  +   V+++  +K +               F+      +    YA++FF   
Sbjct: 1   MNWLYLLIAIVAEVIATTSLKPAE-------------GFTKLWPSVVVVIGYAVAFFFLS 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + +    V +A  + +   + +   LS   + + F     IG+  ++ G+ +++ 
Sbjct: 48  LTLKTIPVGVAYAIWSGLGVALVALLSWWFYGQAFDLAGVIGVCLIVSGVVVLNL 102


>gi|307107913|gb|EFN56154.1| hypothetical protein CHLNCDRAFT_57607 [Chlorella variabilis]
          Length = 504

 Score = 33.8 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 34  ADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIII-----IATCLSS 88
           A     + G         +  +   + MVVA F++ IA T   + ++      I T  ++
Sbjct: 291 ASPYFATVGMGLLSCLIIFGGAIIAFAMVVAEFAL-IANTSALTFMVAGTFKEIVTVAAA 349

Query: 89  LIW-DEPFYWTTAIGIMFVMIGITLISF 115
           +++  E F W  A+G++ ++ G+ L ++
Sbjct: 350 VMFLGEQFTWINAMGLLVLIAGVVLFNY 377


>gi|254524461|ref|ZP_05136516.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219722052|gb|EED40577.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 119

 Score = 33.8 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 4   IALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVV 63
           +  LANV L     +  K +   P+                 W+G   Y + F  +I  +
Sbjct: 7   LLWLANVVLDTGGQLAFKAAASDPQDGEGLQRWKHMLSRPWLWIGIACYVLEFVAWIAFL 66

Query: 64  AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
           +   +     ++ S  I+        ++ E        G++ V  G+ ++
Sbjct: 67  SLVPLSKG-VLLGSINIVALMIAGRFLFREKLTPLRVTGMLLVTAGVAVV 115


>gi|86144991|ref|ZP_01063323.1| quaternary ammonium compound-resistance protein [Vibrio sp. MED222]
 gi|85837890|gb|EAQ56002.1| quaternary ammonium compound-resistance protein [Vibrio sp. MED222]
          Length = 129

 Score = 33.8 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 1/114 (0%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLG-FFFYAISFFTYIM 61
           ++ L +N+ L V + V + ++I+           T+              Y  +F+   +
Sbjct: 9   FLVLDSNMLLSVPTPVMLSLAIMLEVVATSLLPKTQHFTSLPATAAVLASYGCAFYLLSL 68

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
            V    + +A  +   A I++   LS L++ +       IGI  ++ G+ +I+ 
Sbjct: 69  TVQTMFLGVAYAIWCGAGIVLVAALSWLVYGQKLDIFAIIGIALILAGVVIINL 122


>gi|293396005|ref|ZP_06640286.1| DMT superfamily multidrug transporter EmrE [Serratia odorifera DSM
           4582]
 gi|291421503|gb|EFE94751.1| DMT superfamily multidrug transporter EmrE [Serratia odorifera DSM
           4582]
          Length = 110

 Score = 33.8 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 35/78 (44%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      +    Y ++F+   MVV    + I   + +   I++ +  +  ++++   W
Sbjct: 26  GFTRLWPSLVVVVGYGVAFWGLSMVVKTMPLGIVYAIWSGMGIVLVSIAAVFVYNQKLDW 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+  ++ G+ +I+ 
Sbjct: 86  PAIIGMGLIIAGVLVINL 103


>gi|330877757|gb|EGH11906.1| 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit
           ArnF [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 134

 Score = 33.8 bits (76), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 49  FFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSL-IWDEPFYWTTAIGIMFVM 107
              YA+S   +++ +    +  A ++++ +  ++ T  ++L ++ E F  +  +G+  ++
Sbjct: 48  ITAYAMSMLFWLLALRDLPLSRAYSLLSISYALVYTLAAALPLFHETFTVSKTVGVTLIV 107

Query: 108 IGITLISFHTI 118
            G+  I+   I
Sbjct: 108 AGVLTINLRRI 118


>gi|325687905|gb|EGD29925.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK72]
 gi|327474018|gb|EGF19431.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK408]
 gi|328946067|gb|EGG40213.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1087]
 gi|332361468|gb|EGJ39272.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1056]
 gi|332366464|gb|EGJ44212.1| DMT superfamily drug/metabolite transporter [Streptococcus
           sanguinis SK1059]
          Length = 108

 Score = 33.8 bits (76), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
           L   FY + FF   + +    + +A  + +   ++  T LS L+W E     + +GI  V
Sbjct: 35  LALMFYGLCFFFLSLSLKGIQLNLAYAIWSGIGLVGTTILSILLWHEKVTAVSLLGISLV 94

Query: 107 MIGITLISF 115
           ++G+ L++ 
Sbjct: 95  IVGLVLLNL 103


>gi|17231000|ref|NP_487548.1| hypothetical protein alr3508 [Nostoc sp. PCC 7120]
 gi|17132641|dbj|BAB75207.1| alr3508 [Nostoc sp. PCC 7120]
          Length = 112

 Score = 33.8 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%)

Query: 42  GKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAI 101
                 G   Y +S   Y++V+   ++ IA  +V    I++ T   +++  E    +  I
Sbjct: 35  NFYLVGGICCYGLSTIFYVLVLGKLNLSIAYPLVIGLTIVLTTIAGAVVLREKVLVSQWI 94

Query: 102 GIMFVMIGITLISF 115
           GI  ++ GI+ I+ 
Sbjct: 95  GIGLLLSGISAIAL 108


>gi|255325775|ref|ZP_05366869.1| small multidrug resistance protein [Corynebacterium
           tuberculostearicum SK141]
 gi|255297186|gb|EET76509.1| small multidrug resistance protein [Corynebacterium
           tuberculostearicum SK141]
          Length = 119

 Score = 33.8 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 30/119 (25%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+ L   +A  V+ +V +K ++                    FW     Y ++ F +I+ 
Sbjct: 4   WVILFLAIAAEVVGTVALKYAVDH------------------FW----IYGVAAFCFILA 41

Query: 63  VAHF--------SVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113
            A          +V +A  +  S  +I    LS+ ++ EP       GI  +M G+  +
Sbjct: 42  FALLHRVMQEGVNVGVAYGLWASGGVISTALLSAALFGEPLGAVKLAGIALIMAGVFCV 100


>gi|198437638|ref|XP_002124587.1| PREDICTED: similar to sodium channel, voltage-gated, type I like,
           alpha b [Ciona intestinalis]
          Length = 1328

 Score = 33.8 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 9   NVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGK--LFWLGFFFYAISFFTYIMVVA 64
                V ++      ++  E  P F     F       F+ G F YA  FF   +++A
Sbjct: 428 GAFDQVANAALHMFVLMSTENYPEFIIP-AFVKNWANFFYFGLFLYAGVFFLTAILLA 484


>gi|91975676|ref|YP_568335.1| small multidrug resistance protein [Rhodopseudomonas palustris
           BisB5]
 gi|91682132|gb|ABE38434.1| small multidrug resistance protein [Rhodopseudomonas palustris
           BisB5]
          Length = 122

 Score = 33.8 bits (76), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 35/83 (42%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
            A S +F+           Y +SF+     +    V IA  + +   I++ + +  + + 
Sbjct: 33  LAQSQQFTKPWPSVGTAVCYVLSFYLLSHALKTMPVGIAYAIWSGLGIVLISAVGYIAFR 92

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +       IGI F++ G+ +++ 
Sbjct: 93  QTLDLAAIIGIGFILTGVVIVNA 115


>gi|15802014|ref|NP_288035.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7
           EDL933]
 gi|15831560|ref|NP_310333.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129558|ref|NP_416117.1| multidrug efflux system transporter [Escherichia coli str. K-12
           substr. MG1655]
 gi|24112987|ref|NP_707497.1| multidrug efflux system protein MdtJ [Shigella flexneri 2a str.
           301]
 gi|30063114|ref|NP_837285.1| multidrug efflux system protein MdtJ [Shigella flexneri 2a str.
           2457T]
 gi|74312075|ref|YP_310494.1| multidrug efflux system protein MdtJ [Shigella sonnei Ss046]
 gi|82544033|ref|YP_407980.1| multidrug efflux system protein MdtJ [Shigella boydii Sb227]
 gi|82776831|ref|YP_403180.1| multidrug efflux system protein MdtJ [Shigella dysenteriae Sd197]
 gi|89108441|ref|AP_002221.1| multidrug efflux system transporter [Escherichia coli str. K-12
           substr. W3110]
 gi|91210811|ref|YP_540797.1| multidrug efflux system protein MdtJ [Escherichia coli UTI89]
 gi|110641722|ref|YP_669452.1| multidrug efflux system protein MdtJ [Escherichia coli 536]
 gi|110805573|ref|YP_689093.1| multidrug efflux system protein MdtJ [Shigella flexneri 5 str.
           8401]
 gi|117623786|ref|YP_852699.1| multidrug efflux system protein MdtJ [Escherichia coli APEC O1]
 gi|157158482|ref|YP_001462888.1| multidrug efflux system protein MdtJ [Escherichia coli E24377A]
 gi|157161060|ref|YP_001458378.1| multidrug efflux system protein MdtJ [Escherichia coli HS]
 gi|168750591|ref|ZP_02775613.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4113]
 gi|168757488|ref|ZP_02782495.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4401]
 gi|168763701|ref|ZP_02788708.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771138|ref|ZP_02796145.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775826|ref|ZP_02800833.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783419|ref|ZP_02808426.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4076]
 gi|168789433|ref|ZP_02814440.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC869]
 gi|168800856|ref|ZP_02825863.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC508]
 gi|170020047|ref|YP_001725001.1| multidrug efflux system protein MdtJ [Escherichia coli ATCC 8739]
 gi|170081264|ref|YP_001730584.1| multidrug efflux system transporter [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683606|ref|YP_001743654.1| multidrug efflux system protein MdtJ [Escherichia coli SMS-3-5]
 gi|187733682|ref|YP_001880354.1| multidrug efflux system protein MdtJ [Shigella boydii CDC 3083-94]
 gi|188492102|ref|ZP_02999372.1| multidrug resistance protein MdtJ [Escherichia coli 53638]
 gi|191165931|ref|ZP_03027768.1| multidrug resistance protein MdtJ [Escherichia coli B7A]
 gi|191174313|ref|ZP_03035820.1| multidrug resistance protein MdtJ [Escherichia coli F11]
 gi|193067211|ref|ZP_03048180.1| multidrug resistance protein MdtJ [Escherichia coli E110019]
 gi|194436419|ref|ZP_03068520.1| multidrug resistance protein MdtJ [Escherichia coli 101-1]
 gi|195938989|ref|ZP_03084371.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           EC4024]
 gi|208810428|ref|ZP_03252304.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4206]
 gi|208817022|ref|ZP_03258142.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819601|ref|ZP_03259921.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398892|ref|YP_002270672.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918912|ref|YP_002292996.1| multidrug efflux system protein MdtJ [Escherichia coli SE11]
 gi|217328952|ref|ZP_03445033.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           TW14588]
 gi|218554167|ref|YP_002387080.1| multidrug efflux system protein MdtJ [Escherichia coli IAI1]
 gi|218558470|ref|YP_002391383.1| multidrug efflux system protein MdtJ [Escherichia coli S88]
 gi|218689520|ref|YP_002397732.1| multidrug efflux system protein MdtJ [Escherichia coli ED1a]
 gi|218695162|ref|YP_002402829.1| multidrug efflux system protein MdtJ [Escherichia coli 55989]
 gi|237705539|ref|ZP_04536020.1| spermidine export protein mdtJ [Escherichia sp. 3_2_53FAA]
 gi|238900816|ref|YP_002926612.1| multidrug efflux system transporter [Escherichia coli BW2952]
 gi|253773444|ref|YP_003036275.1| multidrug efflux system protein MdtJ [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161661|ref|YP_003044769.1| multidrug efflux system protein MdtJ [Escherichia coli B str.
           REL606]
 gi|254793217|ref|YP_003078054.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018208|ref|ZP_05432073.1| multidrug efflux system protein MdtJ [Shigella sp. D9]
 gi|256022740|ref|ZP_05436605.1| multidrug efflux system protein MdtJ [Escherichia sp. 4_1_40B]
 gi|260855402|ref|YP_003229293.1| multidrug efflux system protein MdtJ [Escherichia coli O26:H11 str.
           11368]
 gi|260868091|ref|YP_003234493.1| multidrug efflux system protein MdtJ [Escherichia coli O111:H- str.
           11128]
 gi|261227956|ref|ZP_05942237.1| multidrug efflux system transporter [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258310|ref|ZP_05950843.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282732|ref|YP_003499550.1| Spermidine export protein mdtJ [Escherichia coli O55:H7 str.
           CB9615]
 gi|293405100|ref|ZP_06649092.1| multidrug efflux system protein MdtJ [Escherichia coli FVEC1412]
 gi|293409910|ref|ZP_06653486.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293414916|ref|ZP_06657559.1| multidrug efflux system protein MdtJ [Escherichia coli B185]
 gi|293445974|ref|ZP_06662396.1| SMR family small multidrug resistance protein [Escherichia coli
           B088]
 gi|297516887|ref|ZP_06935273.1| multidrug efflux system protein MdtJ [Escherichia coli OP50]
 gi|298380747|ref|ZP_06990346.1| multidrug efflux system protein MdtJ [Escherichia coli FVEC1302]
 gi|300819342|ref|ZP_07099541.1| multidrug resistance protein, SMR family [Escherichia coli MS
           107-1]
 gi|300821532|ref|ZP_07101679.1| multidrug resistance protein, SMR family [Escherichia coli MS
           119-7]
 gi|300901605|ref|ZP_07119668.1| multidrug resistance protein, SMR family [Escherichia coli MS
           198-1]
 gi|300918736|ref|ZP_07135311.1| multidrug resistance protein, SMR family [Escherichia coli MS
           115-1]
 gi|300927436|ref|ZP_07143155.1| multidrug resistance protein, SMR family [Escherichia coli MS
           182-1]
 gi|300951051|ref|ZP_07164922.1| multidrug resistance protein, SMR family [Escherichia coli MS
           116-1]
 gi|300959059|ref|ZP_07171154.1| multidrug resistance protein, SMR family [Escherichia coli MS
           175-1]
 gi|300978406|ref|ZP_07174256.1| multidrug resistance protein, SMR family [Escherichia coli MS
           200-1]
 gi|301026724|ref|ZP_07190133.1| multidrug resistance protein, SMR family [Escherichia coli MS 69-1]
 gi|301029239|ref|ZP_07192351.1| multidrug resistance protein, SMR family [Escherichia coli MS
           196-1]
 gi|301326478|ref|ZP_07219827.1| multidrug resistance protein, SMR family [Escherichia coli MS 78-1]
 gi|301647764|ref|ZP_07247556.1| multidrug resistance protein, SMR family [Escherichia coli MS
           146-1]
 gi|306813438|ref|ZP_07447628.1| multidrug efflux system protein MdtJ [Escherichia coli NC101]
 gi|307138250|ref|ZP_07497606.1| multidrug efflux system protein MdtJ [Escherichia coli H736]
 gi|307310830|ref|ZP_07590476.1| small multidrug resistance protein [Escherichia coli W]
 gi|309793363|ref|ZP_07687790.1| multidrug resistance protein, SMR family [Escherichia coli MS
           145-7]
 gi|312969616|ref|ZP_07783799.1| multidrug resistance protein ebrB [Escherichia coli 1827-70]
 gi|331642184|ref|ZP_08343319.1| spermidine export protein MdtJ [Escherichia coli H736]
 gi|331647087|ref|ZP_08348181.1| spermidine export protein MdtJ [Escherichia coli M605]
 gi|331652991|ref|ZP_08353996.1| spermidine export protein MdtJ [Escherichia coli M718]
 gi|331657565|ref|ZP_08358527.1| spermidine export protein MdtJ [Escherichia coli TA206]
 gi|331663067|ref|ZP_08363977.1| spermidine export protein MdtJ [Escherichia coli TA143]
 gi|331668274|ref|ZP_08369122.1| spermidine export protein MdtJ [Escherichia coli TA271]
 gi|331673174|ref|ZP_08373942.1| spermidine export protein MdtJ [Escherichia coli TA280]
 gi|331677460|ref|ZP_08378135.1| spermidine export protein MdtJ [Escherichia coli H591]
 gi|331683105|ref|ZP_08383706.1| spermidine export protein MdtJ [Escherichia coli H299]
 gi|332279259|ref|ZP_08391672.1| spermidine export protein mdtJ [Shigella sp. D9]
 gi|59799820|sp|P69212|MDTJ_ECOLI RecName: Full=Spermidine export protein mdtJ
 gi|59799821|sp|P69213|MDTJ_ECO57 RecName: Full=Spermidine export protein mdtJ
 gi|59799822|sp|P69214|MDTJ_SHIFL RecName: Full=Spermidine export protein mdtJ
 gi|122423696|sp|Q1RBJ8|MDTJ_ECOUT RecName: Full=Spermidine export protein mdtJ
 gi|123148059|sp|Q0THM8|MDTJ_ECOL5 RecName: Full=Spermidine export protein mdtJ
 gi|123342838|sp|Q0T4H7|MDTJ_SHIF8 RecName: Full=Spermidine export protein mdtJ
 gi|123559657|sp|Q320V6|MDTJ_SHIBS RecName: Full=Spermidine export protein mdtJ
 gi|123562645|sp|Q32G66|MDTJ_SHIDS RecName: Full=Spermidine export protein mdtJ
 gi|123617192|sp|Q3Z1V3|MDTJ_SHISS RecName: Full=Spermidine export protein mdtJ
 gi|187609642|sp|A7ZM59|MDTJ_ECO24 RecName: Full=Spermidine export protein mdtJ
 gi|187609643|sp|A8A0E1|MDTJ_ECOHS RecName: Full=Spermidine export protein mdtJ
 gi|187609644|sp|A1ABE5|MDTJ_ECOK1 RecName: Full=Spermidine export protein mdtJ
 gi|189081620|sp|B1IQZ0|MDTJ_ECOLC RecName: Full=Spermidine export protein mdtJ
 gi|226702335|sp|B7M9V3|MDTJ_ECO45 RecName: Full=Spermidine export protein mdtJ
 gi|226702336|sp|B5Z436|MDTJ_ECO5E RecName: Full=Spermidine export protein mdtJ
 gi|226702337|sp|B7LZZ2|MDTJ_ECO8A RecName: Full=Spermidine export protein mdtJ
 gi|226702338|sp|B1XF65|MDTJ_ECODH RecName: Full=Spermidine export protein mdtJ
 gi|226702339|sp|B6IB34|MDTJ_ECOSE RecName: Full=Spermidine export protein mdtJ
 gi|226702340|sp|B1LET6|MDTJ_ECOSM RecName: Full=Spermidine export protein mdtJ
 gi|226702349|sp|B2U1Q9|MDTJ_SHIB3 RecName: Full=Spermidine export protein mdtJ
 gi|254810299|sp|B7L5F2|MDTJ_ECO55 RecName: Full=Spermidine export protein mdtJ
 gi|254810300|sp|B7MV46|MDTJ_ECO81 RecName: Full=Spermidine export protein mdtJ
 gi|259495559|sp|C4ZY63|MDTJ_ECOBW RecName: Full=Spermidine export protein mdtJ
 gi|12515578|gb|AAG56587.1|AE005383_9 possible chaperone [Escherichia coli O157:H7 str. EDL933]
 gi|1742634|dbj|BAA15334.1| multidrug efflux system transporter [Escherichia coli str. K12
           substr. W3110]
 gi|1787884|gb|AAC74672.1| multidrug efflux system transporter [Escherichia coli str. K-12
           substr. MG1655]
 gi|13361773|dbj|BAB35729.1| possible chaperone [Escherichia coli O157:H7 str. Sakai]
 gi|24051947|gb|AAN43204.1| possible chaperone [Shigella flexneri 2a str. 301]
 gi|30041363|gb|AAP17092.1| possible chaperone [Shigella flexneri 2a str. 2457T]
 gi|73855552|gb|AAZ88259.1| possible chaperone [Shigella sonnei Ss046]
 gi|81240979|gb|ABB61689.1| possible chaperone [Shigella dysenteriae Sd197]
 gi|81245444|gb|ABB66152.1| possible chaperone [Shigella boydii Sb227]
 gi|91072385|gb|ABE07266.1| YdgF SMR protein, subunit of YdgEF complex [Escherichia coli UTI89]
 gi|110343314|gb|ABG69551.1| hypothetical protein YdgF (putative multidrug transmembrane
           resistance protein) [Escherichia coli 536]
 gi|110615121|gb|ABF03788.1| possible chaperone [Shigella flexneri 5 str. 8401]
 gi|115512910|gb|ABJ00985.1| putative chaperone [Escherichia coli APEC O1]
 gi|157066740|gb|ABV05995.1| multidrug resistance protein MdtJ [Escherichia coli HS]
 gi|157080512|gb|ABV20220.1| multidrug resistance protein MdtJ [Escherichia coli E24377A]
 gi|169754975|gb|ACA77674.1| small multidrug resistance protein [Escherichia coli ATCC 8739]
 gi|169889099|gb|ACB02806.1| multidrug efflux system transporter [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521324|gb|ACB19502.1| multidrug resistance protein MdtJ [Escherichia coli SMS-3-5]
 gi|187430674|gb|ACD09948.1| multidrug resistance protein MdtJ [Shigella boydii CDC 3083-94]
 gi|187768643|gb|EDU32487.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015231|gb|EDU53353.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4113]
 gi|188487301|gb|EDU62404.1| multidrug resistance protein MdtJ [Escherichia coli 53638]
 gi|188999243|gb|EDU68229.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355550|gb|EDU73969.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360000|gb|EDU78419.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366211|gb|EDU84627.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370924|gb|EDU89340.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC869]
 gi|189376892|gb|EDU95308.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC508]
 gi|190904062|gb|EDV63774.1| multidrug resistance protein MdtJ [Escherichia coli B7A]
 gi|190905392|gb|EDV65024.1| multidrug resistance protein MdtJ [Escherichia coli F11]
 gi|192959801|gb|EDV90235.1| multidrug resistance protein MdtJ [Escherichia coli E110019]
 gi|194424451|gb|EDX40437.1| multidrug resistance protein MdtJ [Escherichia coli 101-1]
 gi|208724944|gb|EDZ74651.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731365|gb|EDZ80054.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739724|gb|EDZ87406.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160292|gb|ACI37725.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           EC4115]
 gi|209769948|gb|ACI83286.1| possible chaperone [Escherichia coli]
 gi|209769950|gb|ACI83287.1| possible chaperone [Escherichia coli]
 gi|209769952|gb|ACI83288.1| possible chaperone [Escherichia coli]
 gi|209769954|gb|ACI83289.1| possible chaperone [Escherichia coli]
 gi|209769956|gb|ACI83290.1| possible chaperone [Escherichia coli]
 gi|209912171|dbj|BAG77245.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|217318299|gb|EEC26726.1| multidrug resistance protein MdtJ [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351894|emb|CAU97619.1| multidrug efflux system transporter [Escherichia coli 55989]
 gi|218360935|emb|CAQ98507.1| multidrug efflux system transporter [Escherichia coli IAI1]
 gi|218365239|emb|CAR02960.1| multidrug efflux system transporter [Escherichia coli S88]
 gi|218427084|emb|CAR07962.2| multidrug efflux system transporter [Escherichia coli ED1a]
 gi|222033358|emb|CAP76099.1| Multidrug resistance protein mdtJ [Escherichia coli LF82]
 gi|226900296|gb|EEH86555.1| spermidine export protein mdtJ [Escherichia sp. 3_2_53FAA]
 gi|238861820|gb|ACR63818.1| multidrug efflux system transporter [Escherichia coli BW2952]
 gi|242377331|emb|CAQ32076.1| MdtJ SMR protein, subunit of MdtJI spermidine SMR transporter
           [Escherichia coli BL21(DE3)]
 gi|253324488|gb|ACT29090.1| small multidrug resistance protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973562|gb|ACT39233.1| multidrug efflux system transporter [Escherichia coli B str.
           REL606]
 gi|253977757|gb|ACT43427.1| multidrug efflux system transporter [Escherichia coli BL21(DE3)]
 gi|254592617|gb|ACT71978.1| multidrug efflux system transporter [Escherichia coli O157:H7 str.
           TW14359]
 gi|257754051|dbj|BAI25553.1| multidrug efflux system protein MdtJ [Escherichia coli O26:H11 str.
           11368]
 gi|257764447|dbj|BAI35942.1| multidrug efflux system protein MdtJ [Escherichia coli O111:H- str.
           11128]
 gi|260449278|gb|ACX39700.1| small multidrug resistance protein [Escherichia coli DH1]
 gi|281178670|dbj|BAI55000.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|281601033|gb|ADA74017.1| Multidrug resistance protein mdtJ [Shigella flexneri 2002017]
 gi|284921505|emb|CBG34576.1| multidrug resistance protein [Escherichia coli 042]
 gi|290762605|gb|ADD56566.1| Spermidine export protein mdtJ [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322804|gb|EFE62232.1| SMR family small multidrug resistance protein [Escherichia coli
           B088]
 gi|291427308|gb|EFF00335.1| multidrug efflux system protein MdtJ [Escherichia coli FVEC1412]
 gi|291432564|gb|EFF05543.1| multidrug efflux system protein MdtJ [Escherichia coli B185]
 gi|291470378|gb|EFF12862.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294494095|gb|ADE92851.1| multidrug resistance protein MdtJ [Escherichia coli IHE3034]
 gi|298278189|gb|EFI19703.1| multidrug efflux system protein MdtJ [Escherichia coli FVEC1302]
 gi|299877842|gb|EFI86053.1| multidrug resistance protein, SMR family [Escherichia coli MS
           196-1]
 gi|300308138|gb|EFJ62658.1| multidrug resistance protein, SMR family [Escherichia coli MS
           200-1]
 gi|300314318|gb|EFJ64102.1| multidrug resistance protein, SMR family [Escherichia coli MS
           175-1]
 gi|300354999|gb|EFJ70869.1| multidrug resistance protein, SMR family [Escherichia coli MS
           198-1]
 gi|300395371|gb|EFJ78909.1| multidrug resistance protein, SMR family [Escherichia coli MS 69-1]
 gi|300414119|gb|EFJ97429.1| multidrug resistance protein, SMR family [Escherichia coli MS
           115-1]
 gi|300416611|gb|EFJ99921.1| multidrug resistance protein, SMR family [Escherichia coli MS
           182-1]
 gi|300449654|gb|EFK13274.1| multidrug resistance protein, SMR family [Escherichia coli MS
           116-1]
 gi|300526035|gb|EFK47104.1| multidrug resistance protein, SMR family [Escherichia coli MS
           119-7]
 gi|300528113|gb|EFK49175.1| multidrug resistance protein, SMR family [Escherichia coli MS
           107-1]
 gi|300846832|gb|EFK74592.1| multidrug resistance protein, SMR family [Escherichia coli MS 78-1]
 gi|301074134|gb|EFK88940.1| multidrug resistance protein, SMR family [Escherichia coli MS
           146-1]
 gi|305853183|gb|EFM53623.1| multidrug efflux system protein MdtJ [Escherichia coli NC101]
 gi|306909008|gb|EFN39504.1| small multidrug resistance protein [Escherichia coli W]
 gi|307626914|gb|ADN71218.1| multidrug efflux system protein MdtJ [Escherichia coli UM146]
 gi|308122950|gb|EFO60212.1| multidrug resistance protein, SMR family [Escherichia coli MS
           145-7]
 gi|309701825|emb|CBJ01137.1| multidrug resistance protein [Escherichia coli ETEC H10407]
 gi|310337901|gb|EFQ02990.1| multidrug resistance protein ebrB [Escherichia coli 1827-70]
 gi|312946200|gb|ADR27027.1| multidrug efflux system protein MdtJ [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313649057|gb|EFS13493.1| multidrug resistance protein ebrB [Shigella flexneri 2a str. 2457T]
 gi|315060906|gb|ADT75233.1| multidrug efflux system transporter [Escherichia coli W]
 gi|315136240|dbj|BAJ43399.1| spermidine export protein mdtJ [Escherichia coli DH1]
 gi|315286256|gb|EFU45692.1| multidrug resistance protein, SMR family [Escherichia coli MS
           110-3]
 gi|315297394|gb|EFU56673.1| multidrug resistance protein, SMR family [Escherichia coli MS 16-3]
 gi|315619054|gb|EFU99636.1| multidrug resistance protein ebrB [Escherichia coli 3431]
 gi|320177382|gb|EFW52383.1| Spermidine export protein mdtJ [Shigella dysenteriae CDC 74-1112]
 gi|320178612|gb|EFW53576.1| Spermidine export protein mdtJ [Shigella boydii ATCC 9905]
 gi|320184784|gb|EFW59575.1| Spermidine export protein mdtJ [Shigella flexneri CDC 796-83]
 gi|320188285|gb|EFW62947.1| Spermidine export protein mdtJ [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195504|gb|EFW70129.1| Spermidine export protein mdtJ [Escherichia coli WV_060327]
 gi|320197783|gb|EFW72391.1| Spermidine export protein mdtJ [Escherichia coli EC4100B]
 gi|320641954|gb|EFX11318.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           G5101]
 gi|320647270|gb|EFX16078.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H- str.
           493-89]
 gi|320652563|gb|EFX20832.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H- str.
           H 2687]
 gi|320653084|gb|EFX21278.1| multidrug efflux system protein MdtJ [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658772|gb|EFX26446.1| multidrug efflux system protein MdtJ [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668623|gb|EFX35428.1| multidrug efflux system protein MdtJ [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323152899|gb|EFZ39169.1| multidrug resistance protein ebrB [Escherichia coli EPECa14]
 gi|323164396|gb|EFZ50199.1| multidrug resistance protein ebrB [Shigella sonnei 53G]
 gi|323169895|gb|EFZ55551.1| multidrug resistance protein ebrB [Escherichia coli LT-68]
 gi|323180914|gb|EFZ66452.1| multidrug resistance protein ebrB [Escherichia coli 1180]
 gi|323185862|gb|EFZ71219.1| multidrug resistance protein ebrB [Escherichia coli 1357]
 gi|323187135|gb|EFZ72450.1| multidrug resistance protein ebrB [Escherichia coli RN587/1]
 gi|323378525|gb|ADX50793.1| small multidrug resistance protein [Escherichia coli KO11]
 gi|323937393|gb|EGB33671.1| small Multidrug Resistance protein [Escherichia coli E1520]
 gi|323940324|gb|EGB36516.1| small Multidrug Resistance protein [Escherichia coli E482]
 gi|323947966|gb|EGB43960.1| small Multidrug Resistance protein [Escherichia coli H120]
 gi|323952584|gb|EGB48456.1| small Multidrug Resistance protein [Escherichia coli H252]
 gi|323956765|gb|EGB52500.1| small Multidrug Resistance protein [Escherichia coli H263]
 gi|323962230|gb|EGB57822.1| small Multidrug Resistance protein [Escherichia coli H489]
 gi|323973766|gb|EGB68940.1| small Multidrug Resistance protein [Escherichia coli TA007]
 gi|324006948|gb|EGB76167.1| multidrug resistance protein, SMR family [Escherichia coli MS 57-2]
 gi|324014784|gb|EGB84003.1| multidrug resistance protein, SMR family [Escherichia coli MS 60-1]
 gi|324019471|gb|EGB88690.1| multidrug resistance protein, SMR family [Escherichia coli MS
           117-3]
 gi|324119354|gb|EGC13241.1| small Multidrug Resistance protein [Escherichia coli E1167]
 gi|326341966|gb|EGD65747.1| Spermidine export protein mdtJ [Escherichia coli O157:H7 str. 1044]
 gi|326343516|gb|EGD67278.1| Spermidine export protein mdtJ [Escherichia coli O157:H7 str. 1125]
 gi|330911407|gb|EGH39917.1| spermidine export protein mdtJ [Escherichia coli AA86]
 gi|331038982|gb|EGI11202.1| spermidine export protein MdtJ [Escherichia coli H736]
 gi|331043870|gb|EGI16006.1| spermidine export protein MdtJ [Escherichia coli M605]
 gi|331049089|gb|EGI21161.1| spermidine export protein MdtJ [Escherichia coli M718]
 gi|331055813|gb|EGI27822.1| spermidine export protein MdtJ [Escherichia coli TA206]
 gi|331058866|gb|EGI30843.1| spermidine export protein MdtJ [Escherichia coli TA143]
 gi|331063468|gb|EGI35379.1| spermidine export protein MdtJ [Escherichia coli TA271]
 gi|331069372|gb|EGI40759.1| spermidine export protein MdtJ [Escherichia coli TA280]
 gi|331073920|gb|EGI45240.1| spermidine export protein MdtJ [Escherichia coli H591]
 gi|331079320|gb|EGI50517.1| spermidine export protein MdtJ [Escherichia coli H299]
 gi|332091405|gb|EGI96491.1| multidrug resistance protein ebrB [Shigella boydii 5216-82]
 gi|332095728|gb|EGJ00740.1| multidrug resistance protein ebrB [Shigella boydii 3594-74]
 gi|332101611|gb|EGJ04957.1| spermidine export protein mdtJ [Shigella sp. D9]
 gi|332343317|gb|AEE56651.1| multidrug resistance protein EbrB [Escherichia coli UMNK88]
 gi|332757188|gb|EGJ87526.1| multidrug resistance protein ebrB [Shigella flexneri 4343-70]
 gi|332758079|gb|EGJ88404.1| multidrug resistance protein ebrB [Shigella flexneri 2747-71]
 gi|332758424|gb|EGJ88745.1| multidrug resistance protein ebrB [Shigella flexneri K-671]
 gi|332766996|gb|EGJ97195.1| mdtJ SMR protein [Shigella flexneri 2930-71]
 gi|333003828|gb|EGK23363.1| multidrug resistance protein ebrB [Shigella flexneri K-218]
 gi|333005250|gb|EGK24770.1| multidrug resistance protein ebrB [Shigella flexneri VA-6]
 gi|333006129|gb|EGK25639.1| multidrug resistance protein ebrB [Shigella flexneri K-272]
 gi|333017922|gb|EGK37227.1| multidrug resistance protein ebrB [Shigella flexneri K-304]
 gi|333018936|gb|EGK38229.1| multidrug resistance protein ebrB [Shigella flexneri K-227]
          Length = 121

 Score = 33.8 bits (76), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L   +A  +  ++ +K + +                   F L     ++S+      
Sbjct: 5   WILLGLAIATEITGTLSMKWASVSE-------------GNGGFILMLVMISLSYIFLSFA 51

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I+  T  S L++DE        G+  ++ GI LI   T
Sbjct: 52  VKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 106


>gi|163760280|ref|ZP_02167363.1| hypothetical protein HPDFL43_08459 [Hoeflea phototrophica DFL-43]
 gi|162282679|gb|EDQ32967.1| hypothetical protein HPDFL43_08459 [Hoeflea phototrophica DFL-43]
          Length = 144

 Score = 33.8 bits (76), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 7/120 (5%)

Query: 1   MKWIALLA-NVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAI 54
           MK+I  +   V     + + +K  ++        AD+      +       + G   + I
Sbjct: 1   MKYIVFILFTVLTNAAAQLMLKQGMLSLGPLSFTADTMIARVFQILFNPWVFAGLTTFVI 60

Query: 55  SFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           S  +++ V++   +  A   ++ A +      +  ++ E        GI  + +G  LI+
Sbjct: 61  SMASHLYVLSKVELSFAYPFLSLAYVA-VAVFAYFVFREDLNSWRIAGIALICVGTVLIA 119


>gi|186475692|ref|YP_001857162.1| hypothetical protein Bphy_0927 [Burkholderia phymatum STM815]
 gi|184192151|gb|ACC70116.1| conserved hypothetical protein [Burkholderia phymatum STM815]
          Length = 141

 Score = 33.8 bits (76), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 6   LLANVALGVLSSVFIKMSIIPPEAPPHFADST-----RFSDGKLFWLGFFFYAISFFTYI 60
           +LA VAL   + + +K              +      R +       G   Y +S   +I
Sbjct: 27  ILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIPIGWRIATQLPIIGGLACYVLSVVVWI 86

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
           + ++   V IA  +++   ++     +  ++ E       IGI  +++G+ +++
Sbjct: 87  VGLSRVDVSIAYPMLSLGYVVN-AFAAWYLFGEVLSAQRLIGIGVILVGVFIVA 139


>gi|192822654|gb|ACF06163.1| Orf3/QacEdelta1 fusion protein [Klebsiella pneumoniae]
          Length = 335

 Score = 33.8 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 13/110 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           W+ L+  +   V+++  +K      E     A S     G         Y I+F+   +V
Sbjct: 224 WLFLVIAIVGEVIATSALK----SSEGFTKLAPSAVVIIG---------YGIAFYFLSLV 270

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITL 112
           +    V +A  V +   ++I T ++ L+  +       +G+  ++    L
Sbjct: 271 LKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLL 320


>gi|26247847|ref|NP_753887.1| multidrug efflux system protein MdtJ [Escherichia coli CFT073]
 gi|227886043|ref|ZP_04003848.1| DMT superfamily drug/metabolite transporter [Escherichia coli
           83972]
 gi|300989169|ref|ZP_07178901.1| multidrug resistance protein, SMR family [Escherichia coli MS 45-1]
 gi|301050167|ref|ZP_07197063.1| multidrug resistance protein, SMR family [Escherichia coli MS
           185-1]
 gi|59798415|sp|Q8FHB4|MDTJ_ECOL6 RecName: Full=Spermidine export protein mdtJ
 gi|26108250|gb|AAN80452.1|AE016761_27 Hypothetical protein ydgF [Escherichia coli CFT073]
 gi|227836972|gb|EEJ47438.1| DMT superfamily drug/metabolite transporter [Escherichia coli
           83972]
 gi|300298116|gb|EFJ54501.1| multidrug resistance protein, SMR family [Escherichia coli MS
           185-1]
 gi|300407367|gb|EFJ90905.1| multidrug resistance protein, SMR family [Escherichia coli MS 45-1]
 gi|307553570|gb|ADN46345.1| multidrug resistance protein MdtJ [Escherichia coli ABU 83972]
 gi|315291940|gb|EFU51292.1| multidrug resistance protein, SMR family [Escherichia coli MS
           153-1]
          Length = 121

 Score = 33.8 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%)

Query: 41  DGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTA 100
               F L     ++S+      V   ++ +A  +     I+  T  S L++DE       
Sbjct: 30  GNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKI 89

Query: 101 IGIMFVMIGITLISFHT 117
            G+  ++ GI LI   T
Sbjct: 90  AGLTTLVAGIVLIKSGT 106


>gi|328552116|gb|AEB22608.1| YvaE [Bacillus amyloliquefaciens TA208]
 gi|328910389|gb|AEB61985.1| small multidrug resistance protein, SMR family [Bacillus
           amyloliquefaciens LL3]
          Length = 120

 Score = 33.8 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 1   MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYI 60
           M WI L   +   V+ +V +K+S               F+      L   FY  S     
Sbjct: 1   MHWIYLSLAIIFEVMGTVSMKLSN-------------GFTKLVPSILLLLFYIGSLCFLT 47

Query: 61  MVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115
           + + + SV IA  V +   I++ + +    + E F    A+ ++ ++IG+  ++F
Sbjct: 48  LTLKYISVSIAYAVWSGMGIVLISFIGIFFFHEQFSVIKAVAVLLIIIGVVTLNF 102


>gi|15889596|ref|NP_355277.1| quaternary ammonium compound-resistance protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157486|gb|AAK88062.1| quaternary ammonium compound-resistance protein [Agrobacterium
           tumefaciens str. C58]
          Length = 114

 Score = 33.8 bits (76), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 35/83 (42%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S +F+      L   FY  +F+     +    V +A  + +   I++ + +   ++ 
Sbjct: 25  LQQSQQFTRLLPTVLMALFYGAAFYLLSFTLRALPVGVAYAIWSGLGIVLISGIGYFVFR 84

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +       IG+ F++ G+ +++ 
Sbjct: 85  QTLDLAAVIGLGFIITGVVIVNV 107


>gi|215486776|ref|YP_002329207.1| multidrug efflux system protein MdtJ [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966642|ref|ZP_07780862.1| multidrug resistance protein ebrB [Escherichia coli 2362-75]
 gi|254810298|sp|B7URU0|MDTJ_ECO27 RecName: Full=Spermidine export protein mdtJ
 gi|215264848|emb|CAS09233.1| multidrug efflux system protein MdtJ [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288752|gb|EFR16652.1| multidrug resistance protein ebrB [Escherichia coli 2362-75]
          Length = 121

 Score = 33.8 bits (76), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L   +A  +  ++ +K + +                   F L     ++S+      
Sbjct: 5   WILLGLAIATEITGTLSMKWASVSE-------------GNGGFILMLVMISLSYIFLSFA 51

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I+  T  S L++DE        G+  ++ GI LI   T
Sbjct: 52  VKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 106


>gi|320194351|gb|EFW68982.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli WV_060327]
          Length = 110

 Score = 33.8 bits (76), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWFFFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAIIGMMLICAGVLVINL 103


>gi|294636279|ref|ZP_06714683.1| multidrug transporter EmrE [Edwardsiella tarda ATCC 23685]
 gi|291090433|gb|EFE22994.1| multidrug transporter EmrE [Edwardsiella tarda ATCC 23685]
          Length = 110

 Score = 33.8 bits (76), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 36/87 (41%)

Query: 29  APPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSS 88
           A      +  F+      L    Y I+F+    VV    + +A  + +   I++ +  + 
Sbjct: 17  ATTALKATEGFTKLGPSLLVVAGYGIAFWGLSQVVKTIPLGVAYAIWSGMGIVLVSLAAY 76

Query: 89  LIWDEPFYWTTAIGIMFVMIGITLISF 115
            ++ +   W   +G+  ++ G+ +I+ 
Sbjct: 77  WLYQQTLDWAALLGMALIIAGVAVINL 103


>gi|325168764|ref|YP_004280554.1| Permeases of the drug/metabolite transporter (DMT) superfamily
           [Agrobacterium sp. H13-3]
 gi|325064487|gb|ADY68176.1| Permeases of the drug/metabolite transporter (DMT) superfamily
           [Agrobacterium sp. H13-3]
          Length = 116

 Score = 33.8 bits (76), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 47  LGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFV 106
            G  F+ +    +  V+A   + IA  ++ ++   + T  S++++ E      +IG+  V
Sbjct: 46  TGIVFWGVELVAWTYVLARVPLSIAFPLM-ASSYAVITIFSAILFREKIGLRHSIGVALV 104

Query: 107 MIGITLI 113
             G+  +
Sbjct: 105 SGGVICV 111


>gi|296823744|ref|XP_002850492.1| DUF803 domain-containing protein [Arthroderma otae CBS 113480]
 gi|238838046|gb|EEQ27708.1| DUF803 domain-containing protein [Arthroderma otae CBS 113480]
          Length = 624

 Score = 33.8 bits (76), Expect = 9.1,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 5/113 (4%)

Query: 6   LLANVALGVLSSVFI----KMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIM 61
           +L  V    L +V +    K  ++  E  P+      F   +     F F + +     +
Sbjct: 16  VLVGVISTSLQAVGLTLQRKSHMLEDEKFPYDTRRPAFKRRRWQVGMFMFVSANIVGSTI 75

Query: 62  VVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
            +    + +  T+  S ++   T  ++LI  EPF   + IG   V  G  LI+
Sbjct: 76  QITTLPLPVLSTLQASGLV-FNTIFATLILGEPFTRYSVIGTCLVCAGAILIA 127


>gi|320334763|ref|YP_004171474.1| small multidrug resistance protein [Deinococcus maricopensis DSM
           21211]
 gi|319756052|gb|ADV67809.1| small multidrug resistance protein [Deinococcus maricopensis DSM
           21211]
          Length = 109

 Score = 33.4 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 24/64 (37%)

Query: 52  YAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGIT 111
           Y  +F     V+    +     V +     +   +  + + + F W    GI  ++ G+ 
Sbjct: 40  YGTAFTLMSRVLTQLPMGFTYAVWSGVGTALTALIGWVYFRDAFQWGALGGIALIIAGVV 99

Query: 112 LISF 115
           +++ 
Sbjct: 100 VLNA 103


>gi|224824205|ref|ZP_03697313.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
 gi|224603624|gb|EEG09799.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
          Length = 112

 Score = 33.4 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 42  GKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAI 101
                LGF  + ++   YI+V+    + +AQ++     + +    + L+  EP   T  +
Sbjct: 37  NIKIVLGFVCFGLAALLYIVVLRVLPLNVAQSLAAMQFVAVI-IAAHLVLGEPIGATRLL 95

Query: 102 GIMFVMIGITLI 113
           GI  +  GI L+
Sbjct: 96  GIGLIFSGIVLV 107


>gi|325293676|ref|YP_004279540.1| Quaternary ammonium compound-resistance protein qacE [Agrobacterium
           sp. H13-3]
 gi|325061529|gb|ADY65220.1| Quaternary ammonium compound-resistance protein qacE [Agrobacterium
           sp. H13-3]
          Length = 114

 Score = 33.4 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 35/83 (42%)

Query: 33  FADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWD 92
              S +F+      L   FY  +F+     +    V +A  + +   I++ + +   ++ 
Sbjct: 25  LQQSQQFTKLLPTVLMALFYGAAFYLLSFTLRALPVGVAYAIWSGLGIVLISGIGYFVFR 84

Query: 93  EPFYWTTAIGIMFVMIGITLISF 115
           +       +G+ F++ G+ +++ 
Sbjct: 85  QTLDIAAVVGLGFIVTGVVIVNV 107


>gi|157201147|dbj|BAF80121.1| multidrug efflux pump SsmE [Serratia marcescens]
          Length = 110

 Score = 33.4 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 34/78 (43%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+      L    Y ++F+   MVV    + I   + +   I++ +  +  ++ +   W
Sbjct: 26  GFTRLWPSLLVVLGYGVAFWGLSMVVKSMPLGIVYAIWSGMGIVLVSVAAVFVYQQKLDW 85

Query: 98  TTAIGIMFVMIGITLISF 115
              +G+  ++ G+ +I+ 
Sbjct: 86  PAIVGMGLIIAGVLVINL 103


>gi|15801338|ref|NP_287355.1| multidrug efflux protein [Escherichia coli O157:H7 EDL933]
 gi|15830868|ref|NP_309641.1| multidrug efflux protein [Escherichia coli O157:H7 str. Sakai]
 gi|168749746|ref|ZP_02774768.1| EmrE protein [Escherichia coli O157:H7 str. EC4113]
 gi|168756484|ref|ZP_02781491.1| EmrE protein [Escherichia coli O157:H7 str. EC4401]
 gi|168762560|ref|ZP_02787567.1| EmrE protein [Escherichia coli O157:H7 str. EC4501]
 gi|168771013|ref|ZP_02796020.1| EmrE protein [Escherichia coli O157:H7 str. EC4486]
 gi|168776044|ref|ZP_02801051.1| EmrE protein [Escherichia coli O157:H7 str. EC4196]
 gi|168782480|ref|ZP_02807487.1| EmrE protein [Escherichia coli O157:H7 str. EC4076]
 gi|168787619|ref|ZP_02812626.1| EmrE protein [Escherichia coli O157:H7 str. EC869]
 gi|168800445|ref|ZP_02825452.1| EmrE protein [Escherichia coli O157:H7 str. EC508]
 gi|195938774|ref|ZP_03084156.1| multidrug efflux protein [Escherichia coli O157:H7 str. EC4024]
 gi|208809477|ref|ZP_03251814.1| EmrE protein [Escherichia coli O157:H7 str. EC4206]
 gi|208815474|ref|ZP_03256653.1| EmrE protein [Escherichia coli O157:H7 str. EC4045]
 gi|208822145|ref|ZP_03262464.1| EmrE protein [Escherichia coli O157:H7 str. EC4042]
 gi|209397090|ref|YP_002270059.1| EmrE protein [Escherichia coli O157:H7 str. EC4115]
 gi|217328543|ref|ZP_03444625.1| EmrE protein [Escherichia coli O157:H7 str. TW14588]
 gi|254792602|ref|YP_003077439.1| multidrug efflux protein [Escherichia coli O157:H7 str. TW14359]
 gi|261227243|ref|ZP_05941524.1| methylviologen resistance protein encoded within prophage CP-933X
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258750|ref|ZP_05951283.1| methylviologen resistance protein encoded within prophage CP-933X
           [Escherichia coli O157:H7 str. FRIK966]
 gi|12514795|gb|AAG55967.1|AE005329_11 methylviologen resistance protein encoded within prophage CP-933X
           [Escherichia coli O157:H7 str. EDL933]
 gi|13361078|dbj|BAB35037.1| integral membrane drug resistance protein EmrE [Escherichia coli
           O157:H7 str. Sakai]
 gi|187768464|gb|EDU32308.1| EmrE protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015988|gb|EDU54110.1| EmrE protein [Escherichia coli O157:H7 str. EC4113]
 gi|189000005|gb|EDU68991.1| EmrE protein [Escherichia coli O157:H7 str. EC4076]
 gi|189356404|gb|EDU74823.1| EmrE protein [Escherichia coli O157:H7 str. EC4401]
 gi|189360148|gb|EDU78567.1| EmrE protein [Escherichia coli O157:H7 str. EC4486]
 gi|189367187|gb|EDU85603.1| EmrE protein [Escherichia coli O157:H7 str. EC4501]
 gi|189372505|gb|EDU90921.1| EmrE protein [Escherichia coli O157:H7 str. EC869]
 gi|189377247|gb|EDU95663.1| EmrE protein [Escherichia coli O157:H7 str. EC508]
 gi|208729278|gb|EDZ78879.1| EmrE protein [Escherichia coli O157:H7 str. EC4206]
 gi|208732122|gb|EDZ80810.1| EmrE protein [Escherichia coli O157:H7 str. EC4045]
 gi|208737630|gb|EDZ85313.1| EmrE protein [Escherichia coli O157:H7 str. EC4042]
 gi|209158490|gb|ACI35923.1| EmrE protein [Escherichia coli O157:H7 str. EC4115]
 gi|217318970|gb|EEC27396.1| EmrE protein [Escherichia coli O157:H7 str. TW14588]
 gi|254592002|gb|ACT71363.1| methylviologen resistance protein encoded within prophage CP-933X
           [Escherichia coli O157:H7 str. TW14359]
 gi|320187868|gb|EFW62538.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli O157:H7 str. EC1212]
 gi|320643657|gb|EFX12796.1| multidrug efflux protein [Escherichia coli O157:H- str. 493-89]
 gi|320648977|gb|EFX17573.1| multidrug efflux protein [Escherichia coli O157:H- str. H 2687]
 gi|326339420|gb|EGD63232.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli O157:H7 str. 1044]
 gi|326341457|gb|EGD65248.1| Ethidium bromide-methyl viologen resistance protein EmrE
           [Escherichia coli O157:H7 str. 1125]
          Length = 110

 Score = 33.4 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F+           Y  SF+     +A+    IA  + +   I++ + LS   + +    
Sbjct: 26  GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL 85

Query: 98  TTAIGIMFVMIGITLISF 115
              IG+M +  G+ +I+ 
Sbjct: 86  PAVIGMMLICAGVLVINL 103


>gi|296140112|ref|YP_003647355.1| small multidrug resistance protein [Tsukamurella paurometabola DSM
           20162]
 gi|296028246|gb|ADG79016.1| small multidrug resistance protein [Tsukamurella paurometabola DSM
           20162]
          Length = 111

 Score = 33.4 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 36/78 (46%)

Query: 38  RFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYW 97
            F +     +    Y  +F    + +   SV +A  + ++A  ++ T  +++++ +   W
Sbjct: 28  GFKNLWPLLIVVPGYIGAFAFLGLSLREISVGVAYAIWSAAGTVLITVGAAVLFHDRISW 87

Query: 98  TTAIGIMFVMIGITLISF 115
            T +G+   + G+ +I+ 
Sbjct: 88  VTMVGMAVTITGVVIINL 105


>gi|227355421|ref|ZP_03839817.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
           29906]
 gi|227164408|gb|EEI49292.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
           29906]
          Length = 146

 Score = 33.4 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 3   WIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMV 62
           WI L+  +   V+ ++ +K + +             ++   + WL     A S+    + 
Sbjct: 4   WIFLVLAIICEVIGTLSMKYASVSG----------GYTGMIVMWL---MIATSYIFLAIA 50

Query: 63  VAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117
           V   ++ +A  +     I+I T  S L + E        G+  ++ GITLI   T
Sbjct: 51  VKKVALGVAYALWEGIGIVIITTFSVLWFGESLSALKLGGLAMLIAGITLIKSGT 105


>gi|228923657|ref|ZP_04086936.1| hypothetical protein bthur0011_46320 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|229112366|ref|ZP_04241904.1| hypothetical protein bcere0018_46060 [Bacillus cereus Rock1-15]
 gi|228671014|gb|EEL26320.1| hypothetical protein bcere0018_46060 [Bacillus cereus Rock1-15]
 gi|228836018|gb|EEM81380.1| hypothetical protein bthur0011_46320 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 109

 Score = 33.4 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 5   ALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVA 64
            ++ +V +GV+  + +K   +  ++                + G  FY +S   +++V+ 
Sbjct: 1   MIILSVGMGVVGQILLKFGAMKSQSSAAVG--IMNFINVPNFFGLAFYGLSALLWMIVLR 58

Query: 65  HFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLIS 114
              +  A  +V+   +      S+L++ E   +    G++ ++ GI  I+
Sbjct: 59  KVDLSYAYPMVSFGYV-FVIIASALLFGETINFMKIAGMVCIVAGILFIA 107


>gi|90424955|ref|YP_533325.1| small multidrug resistance protein [Rhodopseudomonas palustris
           BisB18]
 gi|90106969|gb|ABD89006.1| small multidrug resistance protein [Rhodopseudomonas palustris
           BisB18]
          Length = 110

 Score = 33.4 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 28/65 (43%)

Query: 50  FFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIG 109
            FYA SFF     +    + IA  +     I++   +S ++  +        GI  ++ G
Sbjct: 38  AFYAGSFFLLSQALKSIPLGIAYAIWGGLGIVLTAIISVVVLKQSLDMPAIAGIAMIVGG 97

Query: 110 ITLIS 114
           + +++
Sbjct: 98  VVVVN 102


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.323    0.142    0.410 

Lambda     K      H
   0.267   0.0437    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,240,728,711
Number of Sequences: 14124377
Number of extensions: 78809104
Number of successful extensions: 592127
Number of sequences better than 10.0: 4188
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 2873
Number of HSP's that attempted gapping in prelim test: 588935
Number of HSP's gapped (non-prelim): 4969
length of query: 118
length of database: 4,842,793,630
effective HSP length: 85
effective length of query: 33
effective length of database: 3,642,221,585
effective search space: 120193312305
effective search space used: 120193312305
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.0 bits)
S2: 76 (33.8 bits)