HHsearch alignment for GI: 254780299 and conserved domain: PRK09463
>PRK09463 fadE acyl-CoA dehydrogenase; Reviewed.
Probab=100.00 E-value=0 Score=339.84 Aligned_cols=370 Identities=16% Similarity=0.174 Sum_probs=289.3
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEECCHHHHHHHHHHHH
Q ss_conf 99800167889999972042110789999998501899999986343698462017998521365668899999999996
Q gi|254780299|r 33 GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIH 112 (562)
Q Consensus 33 g~n~~~~D~~l~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~a~~~~P~l~~~d~~G~r~d~v~~~p~~~~l~~~~~~ 112 (562)
T Consensus 58 ~~~lf~G~pdw~~l~~~~~~~Lt~eEqaF---l-d~~v~~lc~m~ddw~i~~~----------~~dlp~---~~w~~~k~ 120 (761)
T PRK09463 58 EGELFSGKPDWKKLLNYPKPTLTAEEQAF---L-DGPVEELCRMVDDWQITHE----------LADLPP---EVWQFIKE 120 (761)
T ss_pred EHHHHCCCCCHHHHHCCCCCCCCHHHHHH---H-CCHHHHHHHHHHHHHHHHH----------HCCCCH---HHHHHHHH
T ss_conf 44040899889999548977589999977---4-3789999986017875400----------145999---99999997
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHCCC-CCCCC--CCHHHHHHHHHHHH--CCHHHHHHHHHHHCCCCCCHH
Q ss_conf 7962033776666444763799999999-983014-45312--21356778999985--087889873012001000544
Q gi|254780299|r 113 DGLHCSIWDRSFEPVVRKQAHKIRAARL-YLMAQL-EAGHL--MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPT 186 (562)
Q Consensus 113 ~Gl~~~~~~~~~~~~~~~~~~~~~~a~~-~l~~~~-~~g~~--cp~~mt~~a~~~L~--~~~e~~~~~lp~l~s~~~~~~ 186 (562)
T Consensus 121 ~~ffgmiIpkeyGGl--~fs~~a~s~v~~kias~s~~~avtvmvpNSL--GpgeLL~~yGTeeQK~~yLPrLA~Ge~--- 193 (761)
T PRK09463 121 HGFFGMIIPKEYGGL--EFSAYAHSRVLQKLASRSGTLAVTVMVPNSL--GPGELLLHYGTDEQKDHYLPRLARGEE--- 193 (761)
T ss_pred CCCEEEEECHHHCCC--CCCHHHHHHHHHHHHCCCCCCEEEEECCCCC--CHHHHHHHHCCHHHHHHHCCCCCCCCC---
T ss_conf 792489812643897--6788999999999972585422788337887--869999882889998633211036773---
Q ss_pred HCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEE-----CCCCEEE---ECCEE-EEEECCCCCEEEEEEECC-------
Q ss_conf 2660015521235544588888786654302786-----4896689---84514-686342115799970469-------
Q gi|254780299|r 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK-----ISDGIYC---LSGHK-WFLSSPMSDAFIMLAQVE------- 250 (562)
Q Consensus 187 ~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~-----~gdg~y~---LnG~K-wf~sa~~ad~~lVlArt~------- 250 (562)
T Consensus 194 ----------IpcFaLTeP~AGSDA~s~~d~gvv~~~~~~G~~-~lg~~Ln~~KryITlapvAtv~glafk~~DP~~llg 262 (761)
T PRK09463 194 ----------IPCFALTSPEAGSDAGSIPDTGVVCKGEWEGEE-VLGMRLTWNKRYITLAPVATVLGLAFKLYDPDGLLG 262 (761)
T ss_pred ----------CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-EEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf ----------103204899888874458762488534225761-699997667778854875417999997468621247
Q ss_pred ----CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCC---CCHHHHHHHHHHHHH-HH
Q ss_conf ----9617999877589884034788630475545657727999869075---300777---657999999730133-35
Q gi|254780299|r 251 ----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDL---NVSTGPVEDMKILIY-LD 319 (562)
Q Consensus 251 ----~Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~---g~G~~~i~~~l~~~R-l~ 319 (562)
T Consensus 263 ~~~~~GIT~aLip~~~pG-----v~iG~rh~plg~~F~-Ngp~~g~dV~VP~d~iIGg~~~~G~Gw~mlme~L~~GR~Is 336 (761)
T PRK09463 263 DKEDLGITCALIPTDTPG-----VEIGRRHFPLNVPFQ-NGPTRGKDVFIPLDYIIGGPKMAGQGWRMLMECLSVGRGIS 336 (761)
T ss_pred CCCCCCEEEEEECCCCCC-----CEECCCCCCCCCCCC-CCCEECCCEEECHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 776566258871289998-----340465586767657-88524451685188804884235860999999871576524
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 79999999999999999998404622242353888899999999999999999999998872011103677765567999
Q gi|254780299|r 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 (562)
Q Consensus 320 ~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~i 399 (562)
T Consensus 337 LpA~a~G~ak~a~~~a~aYA~~RkQFg~PIg~FegIqekLA~ma~~tY~~~A~~~~t~~~~d~g~kPs-------v~sAi 409 (761)
T PRK09463 337 LPSNSTGGAKLAALATGAYARIRRQFKLPIGKFEGVEEPLARIAGNAYLMDAARTLTTAAVDLGEKPS-------VISAI 409 (761)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-------HHHHH
T ss_conf 00545689999999999999989884886454556899999999999999999999999986799951-------89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHCCHHHHHCCCCHHHHH
Q ss_conf 9999999999999569988521300045--518898500122322046222789
Q gi|254780299|r 400 TKYWCCKMAPAVIAEAMECIGGSGYIEE--RSIARHYRESPANSILLGSGNAMV 451 (562)
Q Consensus 400 aK~~~~e~a~~v~~~Aiqi~GG~Gy~ee--~~leRl~RDA~v~~I~EGt~~I~a 451 (562)
T Consensus 410 ~K~~~Te~~r~~~~~aMDi~gG~~I~~Gp~N~l~~~Y~~~Pi~ITVEGA-NILT 462 (761)
T PRK09463 410 AKYHLTERGRQVINDAMDIHGGKGICLGPNNYLARAYQAAPIAITVEGA-NILT 462 (761)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCEEEEECCH-HHHH
T ss_conf 9999889999887663000468743137720442221258857885417-8888