HHsearch alignment for GI: 254780299 and conserved domain: cd01162
>cd01162 IBD Isobutyryl-CoA dehydrogenase (IBD) catalyzes the alpha, beta- dehydrogenation of short branched chain acyl-CoA intermediates in valine catabolism. It is predicted to be a homotetramer.
Probab=100.00 E-value=0 Score=477.82 Aligned_cols=345 Identities=19% Similarity=0.240 Sum_probs=299.5
Q ss_pred CCCEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 69846201799852136566889999999999679620337766664447637999999999830144531221356778
Q gi|254780299|r 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159 (562)
Q Consensus 80 ~~P~l~~~d~~G~r~d~v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt~~ 159 (562)
T Consensus 20 ~~p~a~~~d~~~------~~p~---e~~~~~~~~Gl~~~~vPee~GG~G~--~~~~~~~v~e~l~~~~~~~~~~~~~~~~ 88 (375)
T cd01162 20 MAPHAADWDQKK------HFPV---DVLRKAAELGFGGIYIRDDVGGSGL--SRLDASIIFEALSTGCVSTAAYISIHNM 88 (375)
T ss_pred CHHHHHHHHHCC------CCCH---HHHHHHHHCCCCCCCCCHHHCCCCC--CHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 835499998649------9999---9999999779988889842389998--9999999999998856664359999999
Q ss_pred HHHHHH--CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEE-
Q ss_conf 999985--08788987301200100054426600155212355445888887866543027864896689845146863-
Q gi|254780299|r 160 SMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236 (562)
Q Consensus 160 a~~~L~--~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~s- 236 (562)
T Consensus 89 ~~~~l~~~g~~~qk~~~l~~i~~g~~-------------~~~~a~tEp~~Gsd~~~~~t~a~~~g~~-~~lnG~K~~it~ 154 (375)
T cd01162 89 CAWMIDSFGNDEQRERFLPDLCTMEK-------------LASYCLTEPGSGSDAAALRTRAVREGDH-YVLNGSKAFISG 154 (375)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCC-------------EEEEEECCCCCCCCCCCCEEEEEEECCE-EEEEEEEEECCC
T ss_conf 99999984999999998799847983-------------0488732788888754543599996998-999325850344
Q ss_pred CCCCCEEEEEEECC----CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEE---EEEECCCCCHHHHH
Q ss_conf 42115799970469----961799987758988403478863047554565772799986907---53007776579999
Q gi|254780299|r 237 SPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 (562)
Q Consensus 237 a~~ad~~lVlArt~----~Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~---~~llG~~g~G~~~i 309 (562)
T Consensus 155 a~~Ad~~~v~ar~~~~~~~g~~~flV~~~~pG-----v~~~~~~~~~G~~~~~~~~l~fd~v~Vp~~~~lg~~g~g~~~~ 229 (375)
T cd01162 155 AGDSDVYVVMARTGGEGPKGISCFVVEKGTPG-----LSFGANEKKMGWNAQPTRAVIFEDCRVPVENRLGGEGQGFGIA 229 (375)
T ss_pred CCCCCEEEEEEEECCCCCCEEEEEEECCCCCC-----CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHH
T ss_conf 66665268998527887642589975279988-----6124311345667788405750452235554068766069999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 99730133357999999999999999999840462224235388889999999999999999999999887201110367
Q gi|254780299|r 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 (562)
Q Consensus 310 ~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~ 389 (562)
T Consensus 230 ~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~ladm~~~~~aar~l~~~aa~~~d~~~~~~~- 308 (375)
T cd01162 230 MAGLNGGRLNIASCSLGAAQAALDLARAYLEERKQFGKPLADFQALQFKLADMATELVASRLMVRRAASALDRGDPDAV- 308 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-
T ss_conf 9877899999898789999999999999988788629850049999999999999999999999999999867997679-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf 77655679999999999999999569988521300045518898500122322046222789999998312
Q gi|254780299|r 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 (562)
Q Consensus 390 ~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r 460 (562)
T Consensus 309 -----~~~~~aK~~~s~~a~~v~~~a~qi~Gg~G~~~e~~l~r~~Rdar~~~i~~Gt~ei~r~~iar~il~ 374 (375)
T cd01162 309 -----KLCAMAKRFATDECFDVANQALQLHGGYGYLKDYPVEQYVRDLRVHQILEGTNEIMRLIIARALLT 374 (375)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHC
T ss_conf -----999999999999999999999996473554157589999987178415088799999999999859