HHsearch alignment for GI: 254780299 and conserved domain: pfam00441
>pfam00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain. C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle.
Probab=100.00 E-value=6.7e-33 Score=238.87 Aligned_cols=149 Identities=28% Similarity=0.347 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 65799999973013335799999999999999999984046222423538888999999999999999999999988720
Q gi|254780299|r 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 (562)
Q Consensus 303 g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~ 382 (562)
T Consensus 1 G~G~~~~~~~L~~eR~~~a~~~~g~~~~~l~~~~~~a~~R~~~G~~l~~~~~vq~~la~~~~~~~~~r~~~~~a~~~~~~ 80 (150)
T pfam00441 1 GRGFAVAMETLNHERLLIAAAALGLARRALDEAIEYARQRKAFGRPLIDFQLIRHKLADMAAELEAARLLVYRAAEALDA 80 (150)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf 97299999999999999999999999999999999712301599718756999999886307999999999999999985
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 1110367776556799999999999999995699885213000455188985001223220462227899999983
Q gi|254780299|r 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 (562)
Q Consensus 383 ~~~~~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l 458 (562)
T Consensus 81 ~~~~~~-------~~s~~K~~~te~~~~~~~~a~~l~G~~G~~~~~~~~r~~rdar~~~I~~Gt~ei~r~iia~~~ 149 (150)
T pfam00441 81 GGPDPA-------EAAMAKLYASELAQEVADLAMQLLGGYGYSREYPLERLYRDARVLRIGEGTSEIQRNIIARRL 149 (150)
T ss_pred CCCCHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 999579-------999999999999999999999863866047787999999988287102888999999999986