HHsearch alignment for GI: 254780299 and conserved domain: pfam02771
>pfam02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain. The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain.
Probab=97.65 E-value=0.00011 Score=49.33 Aligned_cols=92 Identities=21% Similarity=0.167 Sum_probs=58.3
Q ss_pred CCCEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 69846201799852136566889999999999679620337766664447637999999999830144531221356778
Q gi|254780299|r 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159 (562)
Q Consensus 80 ~~P~l~~~d~~G~r~d~v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt~~ 159 (562)
T Consensus 19 l~p~~~~~d~~~------~~p~---~~~~~l~~~G~~~~~~P~~~GG~g--~~~~~~~~~~ee~~~~~~~~~~~~~~~~~ 87 (113)
T pfam02771 19 VAPHAAEWDEEG------EFPR---ELWRKLGELGLLGLTIPEEYGGAG--LDYLEYALVAEELARADASVGLALSVHSS 87 (113)
T ss_pred CHHHHHHHHHCC------CCCH---HHHHHHHHCCCCEEECCHHHCCCC--CCHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 822499998769------9999---999999986998150763118999--99999999999998607836899997788
Q ss_pred -HHHHHH--CCHHHHHHHHHHHCCCC
Q ss_conf -999985--08788987301200100
Q gi|254780299|r 160 -SMVALM--TTPRVHKDWAPKIFSRE 182 (562)
Q Consensus 160 -a~~~L~--~~~e~~~~~lp~l~s~~ 182 (562)
T Consensus 88 ~~~~~l~~~gs~~qk~r~Lp~l~~Ge 113 (113)
T pfam02771 88 LVAPPILRFGTEEQKEKYLPKLASGE 113 (113)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCC
T ss_conf 67999999896999998839872899