HHsearch results for GI: 254780299 and protein with PDBid: 3m9v_A

>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00  E-value=0  Score=368.10  Aligned_cols=328  Identities=16%  Similarity=0.152  Sum_probs=257.0

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHCCCCCCCCCCHHHHH--HHHH-HHHCCHHHHHHHH-HHHC
Q ss_conf             9999999679620337766664447637999999-99983014453122135677--8999-9850878898730-1200
Q gi|254780299|r  105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLEAGHLMSPSVTS--ASMV-ALMTTPRVHKDWA-PKIF  179 (562)
Q Consensus       105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~g~~cp~~mt~--~a~~-~L~~~~e~~~~~l-p~l~  179 (562)
                      ++++.+.+.||.++..++++|+.+.+.  +..++ .....+..+.+....+.+..  +... .+....+++++|+ +++.
T Consensus        54 e~~~~l~e~Gl~~~~vP~e~GG~g~~~--l~~~~~~~e~la~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  131 (439)
T 3m9v_A           54 DTFDALRKDGLMGATVPAELGGLGVDR--LYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERIL  131 (439)
T ss_dssp             HHHHHHHHTTGGGTTSCGGGTSCCCCC--HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCHHHCCCCCCH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             999999987999878984139899888--999999999999867549999999988889999873498999999999887


Q ss_pred             CCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCC-----CC
Q ss_conf             1000544266001552123554458888878665430278648966898451468634-21157999704699-----61
Q gi|254780299|r  180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RV  253 (562)
Q Consensus       180 s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~-----Gl  253 (562)
                      .+              .+.+.++||+.+|||...++|++++++|+ |+|||+|+|+|+ ..+|+++|++++++     ++
T Consensus       132 ~~--------------~~~g~~~~e~~~~~~~~~~~t~a~~~~gg-~vlnG~K~~vs~~~~Ad~~~v~a~~~~~~~~~~~  196 (439)
T 3m9v_A          132 RG--------------MVAGDAVVCSGIKDHHTAVTTLRPDGAGG-WLLSGRKTLVSMAPVGTHFVINARTDGTDGPPRL  196 (439)
T ss_dssp             HH--------------HHHTCCCEEEECEECTTCCCEEEECSSSC-EEEEEEEEEETTGGGCSEEEECEEECC--CCCCE
T ss_pred             HH--------------HHHHHHHCCCCCCCCCCCCEEEEECCCCE-EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             88--------------76532302788765444542465327986-9984455033562025544322112236775325


Q ss_pred             EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7999877589884034788630475545657727999869075---30077765799--999973013335799999999
Q gi|254780299|r  254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTG--PVEDMKILIYLDSAIMSVSGM  328 (562)
Q Consensus       254 s~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~--~i~~~l~~~Rl~~a~~~~G~a  328 (562)
                      ++|+||++.||     |++.+.++|+|+|+++|++|.|+||++   ++||++|.|+.  .++..++..|+.+++.++|++
T Consensus       197 ~~flV~~~~~G-----v~v~~~~~~~G~r~s~s~~v~fddv~VP~~~llg~~~~G~~~~~~~~~~~~~r~~~aa~~lG~a  271 (439)
T 3m9v_A          197 ASPVVTRDTPG-----FTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVA  271 (439)
T ss_dssp             EEEEEETTCTT-----EEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHHH
T ss_pred             EEEEEECCCCC-----EEEEEEECCCCCCCCCCCEEECCCEEEEHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             78876079996-----6995431466656777421313663870788004667776532100011346778788788999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999840462224235388889999999999999999999999887201-----11036777655679999999
Q gi|254780299|r  329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYW  403 (562)
Q Consensus       329 r~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~-----~~~~~~~a~arl~t~iaK~~  403 (562)
                      +++++.+++|+++|++||++.     ++.++++|..++++++++++.+....+..     .............++++|++
T Consensus       272 ~~al~~a~~~~~~R~~~~~~~-----~~~~la~~~~~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~  346 (439)
T 3m9v_A          272 QAAYDTAVAALERRPEPPQAA-----ALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLA  346 (439)
T ss_dssp             HHHHHHHHHHHHTCSSCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             999999999998266554356-----999999999999999999999999999999988776663453779999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHH-HHHC
Q ss_conf             9999999995699885213000455188985001223220462227899999-9831
Q gi|254780299|r  404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE  459 (562)
Q Consensus       404 ~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~-r~l~  459 (562)
                      +++.+.+++++|||+|||.||++|+|++|+|||+++.+|||||++||+++++ |.+-
T Consensus       347 ase~a~~v~~~a~q~~Gg~Gy~~~~~leR~~RDar~~~i~~~~~~~~~~~~~g~~~l  403 (439)
T 3m9v_A          347 VNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQAL  403 (439)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             999999999999998518988268769999999877463077499999999999973