HHsearch results for GI: 254780299 and protein with PDBid: 3mpi_A
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=0 Score=405.96 Aligned_cols=329 Identities=22% Similarity=0.260 Sum_probs=275.9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH-HHHHH-HHH-CCHHHHHHHHHHHCCC
Q ss_conf 99999996796203377666644476379999999998301445312213567-78999-985-0878898730120010
Q gi|254780299|r 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT-SASMV-ALM-TTPRVHKDWAPKIFSR 181 (562)
Q Consensus 105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt-~~a~~-~L~-~~~e~~~~~lp~l~s~ 181 (562)
++++...+.||.++.++.++++.+.....+............+.+......+. ..... ... .+++++.+|+|++..+
T Consensus 41 ~~~~~l~~~Gl~~l~vP~~~GG~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 120 (397)
T 3mpi_A 41 EAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSA 120 (397)
T ss_dssp TTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHTTTTHHHHHHHSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 99999997799777899778899999799999999999985046555323443114689998849999999976898579
Q ss_pred CCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCC------CCE
Q ss_conf 00544266001552123554458888878665430278648966898451468634-21157999704699------617
Q gi|254780299|r 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG------RVG 254 (562)
Q Consensus 182 ~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~------Gls 254 (562)
+ .++++++|||++|||+....|+|++++|| |+|||+|+|+|+ +.+|+++|++++++ +.+
T Consensus 121 ~-------------~~~~~~~tEp~~g~~~~~~~~~a~~~~~g-~~l~G~k~~~s~~~~a~~~~v~a~~~~~~~~~~~~~ 186 (397)
T 3mpi_A 121 E-------------FLGGFGITEPDAGSDVMAMSSTAEDKGDH-WLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSA 186 (397)
T ss_dssp S-------------SCCCEECCBTTBSSCGGGCCCEEEECSSE-EEEEEEEEEEETTTTCSSEEEEEESCGGGGGGSEEE
T ss_pred C-------------CCCCCCCCCCCCCCCCCCCCEEEEECCCE-EEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 8-------------54554457898887733354038984993-899999998779622457888521477778664379
Q ss_pred EEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999877589884034788630475545657727999869075---30077765799999973013335799999999999
Q gi|254780299|r 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 (562)
Q Consensus 255 ~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~a 331 (562)
+|+||++.|+ +++.+ ++++|+++++++++.|+++.+ ++||++++|+.+++.+++.+|+.+++.++|+++++
T Consensus 187 ~~vv~~~~~g-----v~~~~-~~~~G~~~s~s~~v~f~~v~Vp~~~llg~~~~g~~~~~~~l~~~~l~~~a~~lG~a~~a 260 (397)
T 3mpi_A 187 FVIEPRNFPG-----IKTSN-LEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQAC 260 (397)
T ss_dssp EEECTTTSTT-----EEEEE-CCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCC-----EEECC-CCCCCCCCCCEEEEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9996189995-----59456-40157888853799992379769990888780799999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998404622242353888899999999999999999999998872011103677765567999999999999999
Q gi|254780299|r 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 (562)
Q Consensus 332 l~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v 411 (562)
++++++|+++|++||+||.++|.+|++|+++.+++++++.++++++..+|+..... +..++++|+++++.+.++
T Consensus 261 l~~~~~~a~~R~~~g~~i~~~~~v~~~la~~~~~~~a~~~l~~~~a~~~d~~~~~~------~~~~~~aK~~a~~~~~~v 334 (397)
T 3mpi_A 261 LDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNN------GLDVAMAKYAAGEAVSKC 334 (397)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEE------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------HHHHHHHHHHHHHHHHHH
T ss_conf 99999999846206844054113799999877689999999999999997489872------789999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 956998852130004551889850012232204622278999999831
Q gi|254780299|r 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 (562)
Q Consensus 412 ~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~ 459 (562)
++.|+|++||.||.+++|++|+|||+++.+|||||++||.+.+.|.+.
T Consensus 335 ~~~a~~~~Gg~g~~~~~pl~r~~Rdar~~~i~eGt~~i~~~~i~~~~l 382 (397)
T 3mpi_A 335 ANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp HHHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 999999637341056678999997525422507659999999999980