HHsearch results for GI: 254780299 and protein with PDBid: 3p4t_A
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=0 Score=428.46 Aligned_cols=328 Identities=19% Similarity=0.228 Sum_probs=282.7
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHH--CCHHHHHHHHHHHCC
Q ss_conf 99999996796203377666644476379999999998301445--31221356778999985--087889873012001
Q gi|254780299|r 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALM--TTPRVHKDWAPKIFS 180 (562)
Q Consensus 105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~--g~~cp~~mt~~a~~~L~--~~~e~~~~~lp~l~s 180 (562)
++++...+.||.++.++.++++.+..... ........+..+. ...+.+.........+. ++++++.+|+|++.+
T Consensus 61 e~~~~l~e~Gl~~l~vP~e~GG~g~~~~~--~~~v~e~la~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 138 (403)
T 3p4t_A 61 ELHRKAAELGLLGAGFPEDAGGSGGDGAD--PVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLR 138 (403)
T ss_dssp HHHHHHHHTTCTTBTSCGGGTCCBCCTHH--HHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCHHHCCCCCCHHH--HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 99999997599877999656899999999--9999999875236642022111003678999852888899850850027
Q ss_pred CCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCC----CCEE
Q ss_conf 000544266001552123554458888878665430278648966898451468634-21157999704699----6179
Q gi|254780299|r 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGC 255 (562)
Q Consensus 181 ~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~----Gls~ 255 (562)
++ +.+++++|||++|||+..++|+|++++|| |+|||+|+|+|+ +.+|+++|+|++++ |+++
T Consensus 139 G~-------------~~~~~a~tEp~~gs~~~~~~t~A~~~~~g-~~l~G~K~~is~~~~Ad~~iv~a~~~~~~~~~~~~ 204 (403)
T 3p4t_A 139 GE-------------KIGALAITEPGGGSDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVSL 204 (403)
T ss_dssp TS-------------SCEEEECCBTTBSSCGGGCCCEEEEETTE-EEEEEEEEEEETTTTCSEEEEEEECSSSSGGGEEE
T ss_pred CC-------------CCCCEEECCCCCCCCCCCCEEEEEEECCE-EEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEE
T ss_conf 88-------------24452654787687676623799997999-99964688577934259999999778988674489
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99877589884034788630475545657727999869075---300777657999999730133357999999999999
Q gi|254780299|r 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 (562)
Q Consensus 256 FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al 332 (562)
|+||++.|| |++.+.++++|+|+++++++.|+||.+ +++|++++|+......++..|+..++.++|++++++
T Consensus 205 ~lV~~~~~G-----v~i~~~~~~~G~r~s~s~~v~f~dv~Vp~~~~~g~~~~g~~~~~~~~~~~~~~~aa~~lG~a~~al 279 (403)
T 3p4t_A 205 IVVDKGTPG-----FEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCL 279 (403)
T ss_dssp EEEETTCTT-----EEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCC-----EEECCCCCCCCCCCCCEEEEEECCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999788996-----075366554567777506999823584399927876753155643211346779999999999999
Q ss_pred HHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999984046222423538888999999999999999999999988720111036777655679999999999999999
Q gi|254780299|r 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 (562)
Q Consensus 333 ~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~ 412 (562)
+.+++|+++|++||+|++++|.+++++++|.++++.++++++++++..|.+..... ..++++|+++++.+.+++
T Consensus 280 ~~a~~y~~~R~~fg~~~~~~~~~~~~la~~~~~~~~a~~~~~~~a~~~~~~~~~~~------~~~~~aK~~a~~~a~~v~ 353 (403)
T 3p4t_A 280 DLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLI------AEVCFAKNTAVEAGEWVA 353 (403)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH------HHHHHHHHHHHHHHHHHH
T ss_conf 99999997463278854111136779999999999999999999999977996558------999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 56998852130004551889850012232204622278999999831
Q gi|254780299|r 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 (562)
Q Consensus 413 ~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~ 459 (562)
++|+|++||.||.+|+|++|+|||+++.+|||||++||.+.+.|.|+
T Consensus 354 ~~a~qi~Gg~G~~~~~pler~~RDar~~~i~eGt~ev~~~iiar~LG 400 (403)
T 3p4t_A 354 NQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTLG 400 (403)
T ss_dssp HHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHCC
T ss_conf 99999706603415668999998622621617889999999999738