HHsearch results for GI: 254780299 and protein with PDBid: 3p4t_A

>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00  E-value=0  Score=428.46  Aligned_cols=328  Identities=19%  Similarity=0.228  Sum_probs=282.7

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHH--CCHHHHHHHHHHHCC
Q ss_conf             99999996796203377666644476379999999998301445--31221356778999985--087889873012001
Q gi|254780299|r  105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA--GHLMSPSVTSASMVALM--TTPRVHKDWAPKIFS  180 (562)
Q Consensus       105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~--g~~cp~~mt~~a~~~L~--~~~e~~~~~lp~l~s  180 (562)
                      ++++...+.||.++.++.++++.+.....  ........+..+.  ...+.+.........+.  ++++++.+|+|++.+
T Consensus        61 e~~~~l~e~Gl~~l~vP~e~GG~g~~~~~--~~~v~e~la~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~  138 (403)
T 3p4t_A           61 ELHRKAAELGLLGAGFPEDAGGSGGDGAD--PVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLR  138 (403)
T ss_dssp             HHHHHHHHTTCTTBTSCGGGTCCBCCTHH--HHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHT
T ss_pred             HHHHHHHHCCCCCCCCCHHHCCCCCCHHH--HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf             99999997599877999656899999999--9999999875236642022111003678999852888899850850027


Q ss_pred             CCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCC----CCEE
Q ss_conf             000544266001552123554458888878665430278648966898451468634-21157999704699----6179
Q gi|254780299|r  181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGC  255 (562)
Q Consensus       181 ~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~----Gls~  255 (562)
                      ++             +.+++++|||++|||+..++|+|++++|| |+|||+|+|+|+ +.+|+++|+|++++    |+++
T Consensus       139 G~-------------~~~~~a~tEp~~gs~~~~~~t~A~~~~~g-~~l~G~K~~is~~~~Ad~~iv~a~~~~~~~~~~~~  204 (403)
T 3p4t_A          139 GE-------------KIGALAITEPGGGSDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVSL  204 (403)
T ss_dssp             TS-------------SCEEEECCBTTBSSCGGGCCCEEEEETTE-EEEEEEEEEEETTTTCSEEEEEEECSSSSGGGEEE
T ss_pred             CC-------------CCCCEEECCCCCCCCCCCCEEEEEEECCE-EEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEE
T ss_conf             88-------------24452654787687676623799997999-99964688577934259999999778988674489


Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99877589884034788630475545657727999869075---300777657999999730133357999999999999
Q gi|254780299|r  256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL  332 (562)
Q Consensus       256 FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al  332 (562)
                      |+||++.||     |++.+.++++|+|+++++++.|+||.+   +++|++++|+......++..|+..++.++|++++++
T Consensus       205 ~lV~~~~~G-----v~i~~~~~~~G~r~s~s~~v~f~dv~Vp~~~~~g~~~~g~~~~~~~~~~~~~~~aa~~lG~a~~al  279 (403)
T 3p4t_A          205 IVVDKGTPG-----FEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCL  279 (403)
T ss_dssp             EEEETTCTT-----EEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCC-----EEECCCCCCCCCCCCCEEEEEECCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999788996-----075366554567777506999823584399927876753155643211346779999999999999


Q ss_pred             HHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999984046222423538888999999999999999999999988720111036777655679999999999999999
Q gi|254780299|r  333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI  412 (562)
Q Consensus       333 ~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~  412 (562)
                      +.+++|+++|++||+|++++|.+++++++|.++++.++++++++++..|.+.....      ..++++|+++++.+.+++
T Consensus       280 ~~a~~y~~~R~~fg~~~~~~~~~~~~la~~~~~~~~a~~~~~~~a~~~~~~~~~~~------~~~~~aK~~a~~~a~~v~  353 (403)
T 3p4t_A          280 DLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLI------AEVCFAKNTAVEAGEWVA  353 (403)
T ss_dssp             HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH------HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH------HHHHHHHHHHHHHHHHHH
T ss_conf             99999997463278854111136779999999999999999999999977996558------999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf             56998852130004551889850012232204622278999999831
Q gi|254780299|r  413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE  459 (562)
Q Consensus       413 ~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~  459 (562)
                      ++|+|++||.||.+|+|++|+|||+++.+|||||++||.+.+.|.|+
T Consensus       354 ~~a~qi~Gg~G~~~~~pler~~RDar~~~i~eGt~ev~~~iiar~LG  400 (403)
T 3p4t_A          354 NQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTLG  400 (403)
T ss_dssp             HHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCHHHCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHCC
T ss_conf             99999706603415668999998622621617889999999999738