BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780299|ref|YP_003064712.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus str. psy62] (562 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780299|ref|YP_003064712.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039976|gb|ACT56772.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 562 Score = 1167 bits (3018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/562 (100%), Positives = 562/562 (100%) Query: 1 MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60 MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL Sbjct: 1 MTLREIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL 60 Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW Sbjct: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS Sbjct: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS Sbjct: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG Sbjct: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA Sbjct: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG Sbjct: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG Sbjct: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS Sbjct: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 Query: 541 THCMLHGRFNAAHIIDSLYLDC 562 THCMLHGRFNAAHIIDSLYLDC Sbjct: 541 THCMLHGRFNAAHIIDSLYLDC 562 >gi|315122276|ref|YP_004062765.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495678|gb|ADR52277.1| acyl-CoA dehydrogenase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 551 Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/550 (80%), Positives = 494/550 (89%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ HQ DSL LNQP LFIGMNAY SDS +V L ANFP + KELELLGEYV S +AQ Sbjct: 1 MNQTHQQLDSLSELNQPSLFIGMNAYKSDSFVVDLTANFPRSIRKELELLGEYVFSYSAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN+N PQLHAYG GGER D++EFHPAWHALLRRS+ DGLHC++W+R++EP VRKQ Sbjct: 61 ELARMANHNIPQLHAYGAGGERCDRIEFHPAWHALLRRSMKDGLHCAVWNRNYEPEVRKQ 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HKIRAARLYLMAQLEAGHL S S+TSASMVALMTTPRVHKDWA KI S+EYDPT+KAPM Sbjct: 121 IHKIRAARLYLMAQLEAGHLTSLSMTSASMVALMTTPRVHKDWAYKILSQEYDPTSKAPM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QKTSV IGLGLTEK+GGTDI AITS GQKISDGIYCLSGHKWFLS+PMSDAFIMLA+VEG Sbjct: 181 QKTSVTIGLGLTEKQGGTDIGAITSLGQKISDGIYCLSGHKWFLSAPMSDAFIMLARVEG 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 VGCFLVPRLLEDGS NGLCYQRLKNKIGNRSNATVE+EFSN FGFLLGDLN T PVED Sbjct: 241 IVGCFLVPRLLEDGSSNGLCYQRLKNKIGNRSNATVEVEFSNAFGFLLGDLNAGTSPVED 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 MKIL+YLD AI+S SGMR SLAEAIHYARRR+VSG ILIDQ +M R IAD+ALD+AAATA Sbjct: 301 MKILMYLDCAIISTSGMRASLAEAIHYARRRYVSGNILIDQSIMNRVIADVALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLAN+FDEAK RSE+AAYAR+MAP+TKYWCCK+APAVIAEAMECIGGSGY+EERSIA Sbjct: 361 LSFRLANAFDEAKLRSEDAAYARVMAPVTKYWCCKIAPAVIAEAMECIGGSGYVEERSIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRESPANSILLGSGNAMVLD+LNLLEKG+NLFEQ+FS LE+DLGSSGKKVI +L+DS+ Sbjct: 421 RHYRESPANSILLGSGNAMVLDLLNLLEKGSNLFEQVFSNLEKDLGSSGKKVIDLLQDSV 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 SLCKED+GLAR L E++A+A+SAAAL R G ++IADVFLE+RF N HST+ +LH R N+ Sbjct: 481 SLCKEDRGLARLLIERMAIAASAAALCREGADNIADVFLESRFFGNGHSTYGLLHSRVNS 540 Query: 552 AHIIDSLYLD 561 HIIDSLYLD Sbjct: 541 THIIDSLYLD 550 >gi|222085618|ref|YP_002544148.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] gi|221723066|gb|ACM26222.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] Length = 552 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/548 (59%), Positives = 409/548 (74%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M Q + D+ LNQP L+ G+NAY SD L+V L +N P ++LE +G YV S AQ Sbjct: 1 MTQSTRNDDTFAELNQPSLWSGINAYRSDPLIVDLTSNLPRSTREDLEQMGRYVTSHEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH SIWD +P + Q Sbjct: 61 ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSAGLHSSIWDAQADPDAKGQ 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +HK+RAAR YL AQLE GHL ++TSAS+ A+M +P V KDWAPK+ SR+YD +NK M Sbjct: 121 SHKVRAARFYLTAQLECGHLCPLTMTSASVAAMMASPAVQKDWAPKVLSRKYDSSNKPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A + K+SDGIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRTTADKVSDGIYRLSGHKWFMSAPMSDAFIMLAQTKD 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDGGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G L+ QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASAGIMRASLAEAVHHTRGRSVFGKTLVQQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+FRLA SFD+A S SE+AAYAR+M P+ KYWCCK+APA+I EAMECIGGSGYIEER IA Sbjct: 361 LAFRLAESFDKASSSSEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGSGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR ++ Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGRDLFETVFAGLARDLGPAGKKTIDVLRAAM 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLIEQMALAAGAAELYRLGAGKIADAFIETRLAGGWRSTYGMLDARFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|218509657|ref|ZP_03507535.1| acyl-CoA dehydrogenase protein [Rhizobium etli Brasil 5] Length = 552 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/548 (58%), Positives = 411/548 (75%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN TPQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + Sbjct: 61 ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +N+ M Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|190891326|ref|YP_001977868.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652] gi|190696605|gb|ACE90690.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652] Length = 552 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/548 (58%), Positives = 411/548 (75%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P V ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGVREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN TPQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + Sbjct: 61 ELARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +N+ M Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFTDTFGFLLGGSDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGRMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|241204127|ref|YP_002975223.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858017|gb|ACS55684.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 552 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/548 (58%), Positives = 413/548 (75%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E+ARMAN TPQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + + Sbjct: 61 EMARMANQGTPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKDE 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AHK+RAAR YL +QLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +NK M Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|209548903|ref|YP_002280820.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534659|gb|ACI54594.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 552 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/548 (58%), Positives = 412/548 (75%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ + L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + + Sbjct: 61 ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDE 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AHK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +NK M Sbjct: 121 AHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|116251506|ref|YP_767344.1| acyl CoA-like DNA repair protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256154|emb|CAK07235.1| putative acyl CoA-like DNA repair protein [Rhizobium leguminosarum bv. viciae 3841] Length = 552 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/548 (58%), Positives = 412/548 (75%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E+ARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + + Sbjct: 61 EMARMANQGAPQLRTHGPRGERLDIVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDE 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AHK+RAAR YL +QLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +NK M Sbjct: 121 AHKVRAARFYLTSQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|327190278|gb|EGE57378.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512] Length = 552 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/548 (58%), Positives = 410/548 (74%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + Sbjct: 61 ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTEAKDA 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +N+ M Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASCEVEFSDTFGFLLGGSDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|86357277|ref|YP_469169.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86281379|gb|ABC90442.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 552 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/548 (58%), Positives = 410/548 (74%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENIGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + Sbjct: 61 ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADIEAKDA 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +N+ M Sbjct: 121 GHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPAM 180 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAFIMLAQ + Sbjct: 181 QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE 240 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDGS NGL +QRLK+K+GNRSNA+ E+EF++TFGFLLG + + D Sbjct: 241 GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFTDTFGFLLGGPDAGIRTILD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G +L++QP+M R +AD+ALD+AAATA Sbjct: 301 MVTLTRLDCALASSGIMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA 360 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD+A+ +E+AAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IA Sbjct: 361 LSFRLADAFDKARGNAEDAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA 420 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I Sbjct: 421 RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI 480 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +LC++D+G AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A Sbjct: 481 ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA 540 Query: 552 AHIIDSLY 559 ++I+D LY Sbjct: 541 SYIVDLLY 548 >gi|150396160|ref|YP_001326627.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium medicae WSM419] gi|150027675|gb|ABR59792.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae WSM419] Length = 550 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/548 (56%), Positives = 406/548 (74%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ+++ L LNQP + G+NA+ SD L+V + ++ P + E + LG YV S AQ Sbjct: 1 MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKSLRDEFDGLGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN P+L +GP GER D VEFHPAWHAL+RRS+ GLH S W+ P R + Sbjct: 61 ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +HK+RA R YL AQLE GHL ++TSAS+ A+ ++P V K+WAPKI SR+YD TN+ M Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITSSPAVQKEWAPKILSRKYDSTNRPWM 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A TS +++ +GIY L+GHKWF+S+PMSDAF+MLAQ Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDG NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGAPDAGIRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G L+ QP+M R +AD+ALD+AAA+A Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L + LFEQLF+T+ +DLG +G+K I +LR ++ Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLSRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 SLC+ D+G AR L E++ALA++AA LYR G IAD FLE+R ST+ ML RF++ Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538 Query: 552 AHIIDSLY 559 A+++D LY Sbjct: 539 AYVLDLLY 546 >gi|15888635|ref|NP_354316.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15156363|gb|AAK87101.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 550 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/548 (56%), Positives = 397/548 (72%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M Q + ++L LNQP L+ G+NAY SD L+V L + + E + LG YV S AQ Sbjct: 1 MTQNSRTEETLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEYDQLGRYVTSHEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQLH +GP GER D+VEFHPAWHAL+RRS+ GLH S+W+ S P R Sbjct: 61 ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENS--PDTRGS 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK RA + YL +QLEAGHL ++TSAS+ A+MT+PRV K+W PKI SR+YD K + Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSPRVQKEWMPKILSRKYDSAQKPAL 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QKT+V +G+G+TEK+GGTD+ A + +++ +GIY LSGHKWFLS+PMSD F+MLAQ+ Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRTTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLGD + D Sbjct: 239 GMGCFLVPRYLEDGSKNGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGDPGSGIRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+AR R V G +L+ QP+M R +AD+ALD+AAATA Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHFARGRSVFGKMLVSQPIMTRVLADMALDVAAATA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA +FD A++ EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA Sbjct: 359 LSFRLATAFDAARNNPAEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK +LR +I Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +L + D+G AR L E+ ALA++AA L R G IAD FLE R T+ ML RF+ Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538 Query: 552 AHIIDSLY 559 +IID LY Sbjct: 539 NYIIDLLY 546 >gi|15965058|ref|NP_385411.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|307301130|ref|ZP_07580899.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|15074237|emb|CAC45884.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306904085|gb|EFN34671.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 550 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ+++ L LNQP + G+NA+ SD L+V + ++ P + E + LG YV S AQ Sbjct: 1 MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN P+L +GP GER D VEFHPAWHAL+RRS+ GLH S W+ P R + Sbjct: 61 ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +HK+RA R YL AQLE GHL ++TSAS+ A+ +P V K+WAPKI SR+YD +N+ M Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A TS +++ +GIY L+GHKWF+S+PMSDAF+MLAQ Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDG NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G L+ QP+M R +AD+ALD+AAA+A Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L + LFEQLF+T+ +DLG +G+K I +LR ++ Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 SLC+ D+G AR L E++ALA++AA LYR G IAD FLE+R ST+ ML RF++ Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538 Query: 552 AHIIDSLY 559 A+++D LY Sbjct: 539 AYVLDLLY 546 >gi|307317863|ref|ZP_07597301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306896625|gb|EFN27373.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] Length = 550 Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust. Identities = 307/548 (56%), Positives = 405/548 (73%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ+++ L LNQP + G+NA+ SD L+V + ++ P + E + LG YV S AQ Sbjct: 1 MNQMNRTEQKLAELNQPKPWSGVNAFRSDPLVVDITSSMPKTLRDEFDGLGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN P+L +GP GER D VEFHPAWHAL+RRS+ GLH S W+ P R + Sbjct: 61 ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +HK+RA R YL AQLE GHL ++TSAS+ A+ +P V K+WAPKI SR+YD +N+ M Sbjct: 119 SHKVRAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSSNRPWM 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A TS +++ +GIY L+GHKWF+S+PMSDAF+MLAQ Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLTGHKWFMSAPMSDAFVMLAQTRE 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDG NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R V G L+ QP+M R +AD+ALD+AAA+A Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRKVFGKALVSQPMMTRVLADMALDVAAASA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA +FD A S +E+AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A Sbjct: 359 LSFRLAEAFDNAHSSAEDAAYARIMTPVAKYWCCKIAPALIYEAMECMGGNGYVEERALA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N++ GSGN M LDVL +L + LFEQLF+T+ +DLG +G+K I +LR ++ Sbjct: 419 RHYREAPVNAVWEGSGNVMALDVLRVLGRRKELFEQLFATIGRDLGPAGRKTIEVLRAAM 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 SLC+ D+G AR L E++ALA++AA LYR G IAD FLE+R ST+ ML RF++ Sbjct: 479 SLCERDEGAARMLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRSTYGMLDSRFDS 538 Query: 552 AHIIDSLY 559 A+++D LY Sbjct: 539 AYVLDLLY 546 >gi|325292671|ref|YP_004278535.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325060524|gb|ADY64215.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 550 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 307/548 (56%), Positives = 399/548 (72%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M +++ +SL LNQP L+ G+NAY SD L+V L + + E + LG YV S AQ Sbjct: 1 MTGMNRTEESLAELNQPSLWSGINAYRSDPLIVDLTSGLSRNLRDEFDQLGRYVTSHEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQLH +GP GER D+VEFHPAWHAL+RRS+ GLH S+W+ + E R Sbjct: 61 ELARMANQGVPQLHTHGPRGERLDQVEFHPAWHALMRRSMSSGLHSSVWENAAE--TRGN 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 HK RA + YL +QLEAGHL ++TSAS+ A+MT+ RV K+W PKI SR+YD + K + Sbjct: 119 EHKARATKFYLTSQLEAGHLCPLTMTSASVAAIMTSSRVQKEWVPKILSRKYDSSQKPAL 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QKT+V +G+G+TEK+GGTD+ A S +++ +GIY LSGHKWFLS+PMSD F+MLAQ+ Sbjct: 179 QKTAVTVGMGMTEKQGGTDVRANRSTAERVGEGIYRLSGHKWFLSAPMSDGFVMLAQMGD 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPR LEDGS NGL +QRLK+K+GNRSNA+ E+EF++ FG+LLG+ + D Sbjct: 239 GMGCFLVPRYLEDGSANGLHFQRLKDKLGNRSNASAEVEFTDAFGYLLGEPGSGVRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+AR R V G L+ QP+M R +AD+ALD+AAATA Sbjct: 299 MVTLTRLDCALASSGMMRASLAEAVHFARGRSVFGKTLVSQPIMTRVLADMALDVAAATA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA++FD A++ + EAAYAR+M PI KYWCCK+APA+I EAMEC+GG+GY+EER IA Sbjct: 359 LSFRLASAFDAARNNASEAAYARVMTPIVKYWCCKIAPALIYEAMECLGGNGYVEERPIA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L++G +LF+ +F TLE+DLG +GKK +LR +I Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLQRGKDLFDLVFQTLERDLGPAGKKTTDVLRAAI 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 +L + D+G AR L E+ ALA++AA L R G IAD FLE R T+ ML RF+ Sbjct: 479 ALAERDEGAARLLVEQFALAAAAAELCRLGAGKIADAFLETRLAGGWRHTYGMLDSRFDP 538 Query: 552 AHIIDSLY 559 +IID LY Sbjct: 539 NYIIDLLY 546 >gi|222148314|ref|YP_002549271.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] gi|221735302|gb|ACM36265.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] Length = 547 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 303/540 (56%), Positives = 394/540 (72%), Gaps = 2/540 (0%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 D L LNQP + G+NA+ +D L+V + + E + LG YV S AQELARMAN+ Sbjct: 6 DKLLELNQPRPWSGVNAFRTDPLVVDITNGLSRNLRDEYDTLGRYVTSHEAQELARMANH 65 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P+L +GP GER D VEFHPAWHAL+RRS+ GLH S+W+ + R Q HK RA R Sbjct: 66 NPPELRTHGPRGERLDVVEFHPAWHALMRRSMATGLHSSVWENLAD--ARGQDHKARAVR 123 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 YL AQLE GHL ++TSAS+ ALM +PRV K+WAPKI SR+YD +N+ MQK+++ IG Sbjct: 124 FYLTAQLECGHLCPLTMTSASVAALMGSPRVQKEWAPKILSRKYDSSNRPAMQKSAITIG 183 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 +G+TEK+GGTD+ A S ++ +GIY LSGHKWF+S+PMSD F+MLAQ+ VGCFLVP Sbjct: 184 MGMTEKQGGTDVRANISTATRVGEGIYRLSGHKWFMSAPMSDGFVMLAQMPEGVGCFLVP 243 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 RLLEDGS NGL +QRLK+KIGNRSNA+ E+EF++ FGFLLG+ + +M L LD Sbjct: 244 RLLEDGSANGLQFQRLKDKIGNRSNASSEVEFTDAFGFLLGEQGGGIRTILEMVTLTRLD 303 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ S MR S+AEA+H+ R R V G L+DQP+M R +AD+ALD+AAATALSFRLA + Sbjct: 304 CALASAGIMRASMAEAVHHVRGRSVFGKKLVDQPIMTRVLADMALDVAAATALSFRLAEA 363 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 FD A+ +AAYAR+M P+ KYW CKMAP +I EAMECIGGSGY+EER+IARHYRE+P Sbjct: 364 FDRARDNPADAAYARVMTPVVKYWVCKMAPPLIYEAMECIGGSGYVEERAIARHYREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 N+I GSGN M LDVL +L +G +LFE +F+ LE+DLG SG+K + +LR +++LC+ D+G Sbjct: 424 NAIWEGSGNVMALDVLRVLARGKDLFEMVFAELERDLGPSGRKTVEVLRAAMALCERDEG 483 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 AR L E++ALA++AA LYR G IAD FLE R +T+ +L RF++ ++ID LY Sbjct: 484 AARLLVEQMALAAAAAELYRMGAGKIADAFLETRLTGGWRNTYGVLDARFDSRYLIDLLY 543 >gi|227821660|ref|YP_002825630.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234] gi|227340659|gb|ACP24877.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234] Length = 550 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 306/548 (55%), Positives = 399/548 (72%), Gaps = 2/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ+++ L LNQP + G+NAY SD L+V + + P + E + LG YV S AQ Sbjct: 1 MNQMNRTEQKLAELNQPKPWSGINAYRSDPLMVDITSAMPKPLRDEFDALGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN P+L +GP GER D VEFHPAWHAL+RRS+ GLH S W+ P R + Sbjct: 61 ELARMANEGVPKLKTHGPRGERLDVVEFHPAWHALMRRSMTTGLHSSAWENL--PDERGR 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +HK RA R YL AQLE GHL ++TSAS+ A+ +P V K+WAPKI SR+YD TN+ M Sbjct: 119 SHKARAIRFYLTAQLECGHLCPLTMTSASVAAITASPAVQKEWAPKILSRKYDSTNRPWM 178 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 QK++V IG+G+TEK+GGTD+ A TS +++ +GIY L+GHKWF+S+PMSDAF+MLAQ Sbjct: 179 QKSAVTIGMGMTEKQGGTDVRANTSTAERVGEGIYRLNGHKWFMSAPMSDAFVMLAQTRE 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +GCFLVPRLLEDG NGL +QRLK+K+GNRSNA+ E+EFS+TFGFLLG + + D Sbjct: 239 GLGCFLVPRLLEDGGANGLRFQRLKDKLGNRSNASSEVEFSDTFGFLLGTPDAGIRTILD 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S MR SLAEA+H+ R R+V G L+ QP+M R +AD+ALD+AAA+A Sbjct: 299 MVTLTRLDCALASAGMMRASLAEAVHHTRGRNVFGKSLVSQPMMTRVLADMALDVAAASA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA +FD A +++AAYARIM P+ KYWCCK+APA+I EAMEC+GG+GY+EER++A Sbjct: 359 LSFRLAEAFDNAHGSADDAAYARIMTPVAKYWCCKIAPALIYEAMECLGGNGYVEERALA 418 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 RHYRE+P N+I GSGN M LDVL +L + LFEQLF +DLG +G K I +LR ++ Sbjct: 419 RHYREAPVNAIWEGSGNVMALDVLRVLGRRKELFEQLFGVFSRDLGPAGPKTIDVLRAAM 478 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 SLC+ D+G AR L E++ALA++AA LYR G IAD FLE+R +T+ ML RF++ Sbjct: 479 SLCERDEGAARLLVEQLALAAAAAELYRLGAGRIADAFLESRLAAGWRATYGMLDSRFDS 538 Query: 552 AHIIDSLY 559 A+++D LY Sbjct: 539 AYVLDLLY 546 >gi|13470871|ref|NP_102440.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] gi|14021614|dbj|BAB48226.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] Length = 548 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 270/548 (49%), Positives = 382/548 (69%), Gaps = 4/548 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M Q +D + NQPP G NA+ D LL+ L F V K+L+ LG +VL+ AQ Sbjct: 1 MRQGQSVTDDV--TNQPPPLTGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQ 58 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELAR+AN TP+L + G R D VEFHPA+HAL+RRS+ +GLH S+W+ + R+ Sbjct: 59 ELARLANVETPKLRTHDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR- 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 H++RAAR YL A+LE GHL ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P+ Sbjct: 118 -HQVRAARFYLTAELETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPV 176 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 +KT + +G+G+TEK+GGTD+ A ++ ++ G Y L+GHKWF+S+PMSDAF++LAQ Sbjct: 177 EKTGLTLGMGMTEKQGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPE 236 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + CFLVPR+L DGS NG +QRLK+K+GNRSNA+ E+EF N G ++G+ + D Sbjct: 237 GLSCFLVPRVLGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMIGEPGAGVKTIMD 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L LD A+ S + MR LAEA+H+AR R V G LI+QP+M+R +AD+ALD+AAATA Sbjct: 297 MVTLTRLDCAVASSAIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATA 356 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LSFRLA SFDEA S EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE +A Sbjct: 357 LSFRLARSFDEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLA 416 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 R+YRE+P N+I GSGN M LDVL +L + LFE++ + +++DLG+ G+ I +L+ ++ Sbjct: 417 RYYREAPVNAIWEGSGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAM 476 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 + D+G AR LTE++AL+++AA L R G IAD F+E R +T+ M+ R +A Sbjct: 477 QVALTDEGSARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDA 536 Query: 552 AHIIDSLY 559 IID+LY Sbjct: 537 RMIIDTLY 544 >gi|260459182|ref|ZP_05807437.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259034736|gb|EEW35992.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 542 Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust. Identities = 268/534 (50%), Positives = 376/534 (70%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP G NA+ D LL+ L F V K+L+ LG +VL+ AQELAR+AN TP+L Sbjct: 7 NQPPPLAGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQELARLANVETPKLR 66 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VEFHPA+HAL+RRS+ +GLH S+W+ + R+ H++RAAR YL A+ Sbjct: 67 THDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRR--HQVRAARFYLTAE 124 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LE GHL ++TSAS+ ALM +P++ ++WAP++ +R+YD + K P+ KT + +G+G+TEK Sbjct: 125 LETGHLCPITMTSASLAALMASPKLFREWAPRVTTRKYDQSQKPPVDKTGLTLGMGMTEK 184 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ ++ G Y L+GHKWF+S+PMSDAF++LAQ + CFLVPR+L DG Sbjct: 185 QGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPRVLGDG 244 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S NG +QRLK+K+GNRSNA+ E+EF N G ++G+ + DM L LD A+ S Sbjct: 245 SGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDCAVASS 304 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + MR LAEA+H+AR R V G LI+QP+M+R +AD+ALD+AAATALSFRLA SFDEA S Sbjct: 305 AIMRAGLAEAVHHARHRQVFGSPLIEQPLMQRVLADMALDVAAATALSFRLARSFDEAAS 364 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE +AR+YRE+P N+I G Sbjct: 365 DRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVNAIWEG 424 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDVL +L + LFE++ + +++DLG+ G+ I +L+ ++ + D+G AR LT Sbjct: 425 SGNVMALDVLRVLGRAPGLFEEVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGSARLLT 484 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++AL+++AA L R G IAD F+E R +T+ ML R +A IID+LY Sbjct: 485 EQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMLDARHDARMIIDTLY 538 >gi|319783702|ref|YP_004143178.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169590|gb|ADV13128.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 542 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 267/534 (50%), Positives = 376/534 (70%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP G NA+ D LL+ L F V +EL+ LG +VL+ AQELAR+AN TP+L Sbjct: 7 NQPPPLTGGNAWRGDPLLIQLAERFSDPVRRELDGLGRFVLTQEAQELARLANVETPKLR 66 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VEFHPA+HAL+RRS+ +GLH S+W+ + R+ H++RAAR YL A+ Sbjct: 67 THDRQGRRIDVVEFHPAYHALMRRSVANGLHSSVWENGDTEIGRR--HQVRAARFYLTAE 124 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LE GHL ++T+AS+ ALM +P++ ++WAP++ +R+YD + K P++KT + +G+G+TEK Sbjct: 125 LETGHLCPITMTNASLAALMASPKLFREWAPRVTTRKYDQSQKPPVEKTGLTLGMGMTEK 184 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ ++ G Y L+GHKWF+S+PMSDAF++LAQ + CFLVPR+L DG Sbjct: 185 QGGTDVRANVTRAERAGSGFYRLTGHKWFMSAPMSDAFLVLAQAPEGLSCFLVPRVLGDG 244 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S NG +QRLK+K+GNRSNA+ E+EF N G ++G+ + DM L LD AI S Sbjct: 245 SGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDCAIASS 304 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + MR LAEA+H+AR R V G LI+QP+M+R +AD+ALD+AAATALSFRLA SFDEA S Sbjct: 305 AIMRAGLAEAVHHARHRQVFGSTLIEQPLMQRVLADMALDVAAATALSFRLARSFDEAAS 364 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+AP ++ EAMEC+GG+GY+EE +AR+YRE+P N+I G Sbjct: 365 DRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVNAIWEG 424 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDVL +L + LFE + + +++DLG+ G+ I +L+ ++ + D+G AR LT Sbjct: 425 SGNVMALDVLRVLGRAPGLFEDVLAGIDRDLGAGGRGTIGVLKAAMQVASTDEGSARLLT 484 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++AL+++AA L R G IAD F+E R +T+ M+ R +A IID+LY Sbjct: 485 EQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMIDSRHDARMIIDTLY 538 >gi|254720415|ref|ZP_05182226.1| acyl-CoA dehydrogenase family protein [Brucella sp. 83/13] Length = 551 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 268/550 (48%), Positives = 367/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A T++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|294853604|ref|ZP_06794276.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] gi|294819259|gb|EFG36259.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] Length = 551 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 267/550 (48%), Positives = 367/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN +P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTESPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGIGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|23500342|ref|NP_699782.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|161620660|ref|YP_001594546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis ATCC 23365] gi|225629091|ref|ZP_03787124.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo] gi|254699834|ref|ZP_05161662.1| acyl-CoA dehydrogenase family protein [Brucella suis bv. 5 str. 513] gi|254705906|ref|ZP_05167734.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis M163/99/10] gi|254711133|ref|ZP_05172944.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis B2/94] gi|254712408|ref|ZP_05174219.1| acyl-CoA dehydrogenase family protein [Brucella ceti M644/93/1] gi|254715480|ref|ZP_05177291.1| acyl-CoA dehydrogenase family protein [Brucella ceti M13/05/1] gi|256015375|ref|YP_003105384.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] gi|256029514|ref|ZP_05443128.1| acyl-CoA dehydrogenase family protein [Brucella pinnipedialis M292/94/1] gi|260167395|ref|ZP_05754206.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99] gi|23463957|gb|AAN33787.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|161337471|gb|ABX63775.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365] gi|225615587|gb|EEH12636.1| acyl-CoA dehydrogenase family protein [Brucella ceti str. Cudo] gi|255998035|gb|ACU49722.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] Length = 551 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|265985434|ref|ZP_06098169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306839008|ref|ZP_07471829.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653] gi|306845932|ref|ZP_07478499.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1] gi|264664026|gb|EEZ34287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306273567|gb|EFM55412.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1] gi|306405914|gb|EFM62172.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653] Length = 542 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 264/534 (49%), Positives = 360/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP +H ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A T++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539 >gi|306841754|ref|ZP_07474440.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2] gi|306288159|gb|EFM59546.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2] Length = 542 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 264/534 (49%), Positives = 360/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP +H ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQTGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A T++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANTTRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWIGGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539 >gi|17989016|ref|NP_541649.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|62317545|ref|YP_223398.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269526|ref|YP_418817.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|225686384|ref|YP_002734356.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis ATCC 23457] gi|237817093|ref|ZP_04596085.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A] gi|254691042|ref|ZP_05154296.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 6 str. 870] gi|254695651|ref|ZP_05157479.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 3 str. Tulya] gi|254698826|ref|ZP_05160654.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732273|ref|ZP_05190851.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 4 str. 292] gi|256043495|ref|ZP_05446422.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256111485|ref|ZP_05452499.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3 str. Ether] gi|256256227|ref|ZP_05461763.1| acyl-CoA dehydrogenase domain protein [Brucella abortus bv. 9 str. C68] gi|297249584|ref|ZP_06933285.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|17984855|gb|AAL53913.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|62197738|gb|AAX76037.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939800|emb|CAJ12808.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain [Brucella melitensis biovar Abortus 2308] gi|225642489|gb|ACO02402.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC 23457] gi|237787906|gb|EEP62122.1| acyl-COA dehydrogenase [Brucella abortus str. 2308 A] gi|297173453|gb|EFH32817.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 551 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|256157709|ref|ZP_05455627.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|256253319|ref|ZP_05458855.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] Length = 551 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|148558419|ref|YP_001257585.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] gi|148369704|gb|ABQ62576.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] Length = 551 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMTASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|163844750|ref|YP_001622405.1| hypothetical protein BSUIS_B0595 [Brucella suis ATCC 23445] gi|163675473|gb|ABY39583.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 551 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+L R+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLVRLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|260568114|ref|ZP_05838583.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261217215|ref|ZP_05931496.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261313335|ref|ZP_05952532.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261318724|ref|ZP_05957921.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261320086|ref|ZP_05959283.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261750308|ref|ZP_05994017.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261756805|ref|ZP_06000514.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265986522|ref|ZP_06099079.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|260154779|gb|EEW89860.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|260922304|gb|EEX88872.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261292776|gb|EEX96272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261297947|gb|EEY01444.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261302361|gb|EEY05858.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261736789|gb|EEY24785.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261740061|gb|EEY27987.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|264658719|gb|EEZ28980.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 542 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 263/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP +H ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539 >gi|256059209|ref|ZP_05449415.1| acyl-CoA dehydrogenase family protein [Brucella neotomae 5K33] Length = 551 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/550 (48%), Positives = 366/550 (66%), Gaps = 4/550 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP ++ ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P N+I GSGN M LDV +L + LF+ + + LG G+ I +LR Sbjct: 419 LARAYREAPVNAIWEGSGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 ++ L + D+G+AR LTE++A A++AA L + G +DIAD F+E R +T+ ML R Sbjct: 479 ALQLTETDQGVARLLTEQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARH 538 Query: 550 NAAHIIDSLY 559 NA IID LY Sbjct: 539 NAMRIIDQLY 548 >gi|261220435|ref|ZP_05934716.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|265996214|ref|ZP_06108771.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|260919019|gb|EEX85672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|262550511|gb|EEZ06672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] Length = 542 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 262/534 (49%), Positives = 358/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP +H ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 E A+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAETAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539 >gi|189022800|ref|YP_001932541.1| Acyl-CoA dehydrogenase [Brucella abortus S19] gi|260544781|ref|ZP_05820602.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260564690|ref|ZP_05835175.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260756638|ref|ZP_05868986.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260760068|ref|ZP_05872416.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260763307|ref|ZP_05875639.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882455|ref|ZP_05894069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261216051|ref|ZP_05930332.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|265989913|ref|ZP_06102470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265992982|ref|ZP_06105539.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265999102|ref|ZP_05465007.2| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|189021374|gb|ACD74095.1| Acyl-CoA dehydrogenase [Brucella abortus S19] gi|260098052|gb|EEW81926.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260152333|gb|EEW87426.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260670386|gb|EEX57326.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260673728|gb|EEX60549.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676746|gb|EEX63567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260871983|gb|EEX79052.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260917658|gb|EEX84519.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|262763852|gb|EEZ09884.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263000582|gb|EEZ13272.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092211|gb|EEZ16508.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326410756|gb|ADZ67820.1| Acyl-CoA dehydrogenase [Brucella melitensis M28] gi|326554048|gb|ADZ88687.1| Acyl-CoA dehydrogenase [Brucella melitensis M5-90] Length = 542 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 263/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP +H ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGLWRTTYGMLDARHNAMRIIDQLY 539 >gi|261323158|ref|ZP_05962355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261299138|gb|EEY02635.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] Length = 542 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 262/534 (49%), Positives = 359/534 (67%), Gaps = 2/534 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P G NAY D LL+ + A FP ++ ELE G +VLS AQ+LAR+AN P+L Sbjct: 8 NQTPPITGTNAYLGDPLLMQIAARFPKELYTELEQAGRFVLSAEAQDLARLANTELPKLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ + H+ RAAR YL AQ Sbjct: 68 THDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLESGRRHQARAARFYLTAQ 125 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 LEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K +K V +G+G+TEK Sbjct: 126 LEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKPAFRKQGVTLGMGMTEK 185 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ + + CFL+PRL E G Sbjct: 186 QGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQTKEGLSCFLLPRLGEKG 245 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 NG +QRLK+K+GNRSNA+ E+EF G ++G + DM L LD A+ S Sbjct: 246 ESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTIMDMVTLTRLDCAVASA 305 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S Sbjct: 306 GLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGATALSMRLARAFDMAAS 365 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ ++AR YRE+P N+I G Sbjct: 366 DRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGNLARAYREAPVNAIWEG 425 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 SGN M LDV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LT Sbjct: 426 SGNVMALDVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLT 485 Query: 506 EKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 E++A A++AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 486 EQLAFAAAAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 539 >gi|153010986|ref|YP_001372200.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151562874|gb|ABS16371.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 530 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 258/527 (48%), Positives = 358/527 (67%), Gaps = 2/527 (0%) Query: 33 GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92 G NAY D LL+ + A FP +H +LE G +V S AQ+LAR+AN P+L + G Sbjct: 3 GNNAYLGDPLLMQIAAGFPKELHADLEQTGRFVSSAEAQDLARLANTELPKLRTHDRQGN 62 Query: 93 RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 R D VE+HPA+HAL+RRSI GLHCSIW+ + P+ + H+ RA+R +L AQLEAGHL Sbjct: 63 RIDLVEYHPAYHALMRRSIAAGLHCSIWEGN--PLESGRRHQARASRFFLTAQLEAGHLC 120 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 ++TSAS+ ALM +P ++K+W+P I SR YD + K K + +G+G+TEK+GGTD+ Sbjct: 121 PLTMTSASLAALMASPEIYKEWSPVILSRRYDFSQKPAFAKQGITLGMGMTEKQGGTDVR 180 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 A T++ + DG Y ++GHKWF+S+PMSDAF+ LAQ E + CFL+PRL +GS NG + Sbjct: 181 ANTTRATRNDDGTYAITGHKWFMSAPMSDAFLTLAQAEEGLSCFLLPRLTSEGSGNGFFF 240 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 QRLK+K+GN+SNA+ E+EF G L+G+ + DM L LD AI S MR L Sbjct: 241 QRLKDKLGNKSNASSEVEFDGAIGHLIGNPGEGVKTIMDMVTLTRLDCAIASAGLMRSGL 300 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 AEA+H++R R V G L++QP+M+R +AD+ALD+A ATALS RLA +FD A S EAA+ Sbjct: 301 AEAVHHSRYRQVFGKALVEQPLMQRVLADMALDVAGATALSMRLARAFDMAASDRAEAAF 360 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 AR M P+ KYW CK+APA++ EAMEC+GG+GYIEE ++AR YRE+P N+I GSGN M L Sbjct: 361 ARCMTPVVKYWVCKIAPALLYEAMECLGGNGYIEEGNLARAYREAPVNAIWEGSGNVMAL 420 Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 DV +L + LF+++ + LG G+ + +LR ++ L + D G+AR LTE++A A+ Sbjct: 421 DVARVLSRAPGLFDEVLEWIGGQLGPRGQGTLDVLRAALQLTETDPGVARLLTEQLAYAA 480 Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 +AA L + G +++AD F+E R ST+ ML R NA I+D LY Sbjct: 481 AAAELRQIGADNVADAFIETRLGGQWRSTYGMLDARHNAERILDQLY 527 >gi|110633713|ref|YP_673921.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110284697|gb|ABG62756.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 543 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 265/535 (49%), Positives = 365/535 (68%), Gaps = 2/535 (0%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 LNQPP G NA+ D LLV L F V K++E LG +V + AQELAR+AN P L Sbjct: 7 LNQPPPISGTNAWRGDPLLVQLCERFSEPVRKDVEQLGRFVRTQEAQELARLANTELPVL 66 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VE+HPA+HAL+RRS GLH SIW+ + + Q H+ RAAR YL A Sbjct: 67 KTHDRYGFRVDQVEYHPAYHALMRRSASAGLHSSIWEDGEDE--KGQRHQARAARFYLTA 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE GHL ++TSA++ ALM+ P + + WAP++ +R+YD N+ QK V +G+G+TE Sbjct: 125 QLECGHLCPMTMTSAALAALMSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ A T++ + +G+Y L+GHKWF+S+PMSD F++LAQ E + CFL+PR+ +D Sbjct: 185 KQGGTDVRANTTRAEPAGEGLYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVTDD 244 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ NG +QRLK+K+GNRSNA+ E+EF G+L+G+ + DM L LD A+ S Sbjct: 245 GATNGFRFQRLKDKLGNRSNASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCALAS 304 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 MR +LAEA+H+AR R V G L +QP+M R +AD+ALD+AAATAL+FRLA SFDEA Sbjct: 305 SGLMRAALAEAVHHARHRSVFGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDEAA 364 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + EAAYAR+M P+TKYW CK+APAVI EAMEC+GG+GY+EE +AR+YRE+P N+I Sbjct: 365 NGRAEAAYARVMTPVTKYWVCKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAIWE 424 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL 504 GSGN M LDVL +L + LF+ + + DLG +G + +L ++ +C+ D+G R L Sbjct: 425 GSGNVMALDVLRVLSRNAGLFDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGRIL 484 Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 TE++ALA++AA L R G +AD F+E R T+ ML R++A I+D LY Sbjct: 485 TEQLALAAAAAELKRLGAGQVADAFIETRLAGQWRGTYGMLDARYDAVAILDMLY 539 >gi|163759340|ref|ZP_02166426.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] gi|162283744|gb|EDQ34029.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] Length = 530 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 260/529 (49%), Positives = 359/529 (67%), Gaps = 14/529 (2%) Query: 42 LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHP 101 +L + A+ P + + E +G+Y S AQ+LAR+AN P+L + G R D+V+FHP Sbjct: 1 MLKDIAADMPRGLRADFETVGKYTSSAEAQDLARIANRAVPELRTHDASGNRIDQVDFHP 60 Query: 102 AWHALLRRSIHDGLHCSIWD-RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160 +WHAL+RRS+ GL S+W+ R E V AH+ RA R YL A LE GHL ++T+AS Sbjct: 61 SWHALMRRSVSIGLQGSVWEGRRDEKGV---AHQARAIRFYLTAGLECGHLCPLTMTNAS 117 Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 + A+M PR+ K WAP+I SR YD +++ MQKT V IG+G+TEK+GGTD+ A S+ + Sbjct: 118 IAAIMAAPRIEKSWAPQIVSRRYDSSHRPAMQKTGVTIGMGMTEKQGGTDVRANESRAVR 177 Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----------VGCFLVPRLLEDGSPNGL 270 + +G+Y L GHKWFLS+PMSDAF+MLA+ G + CFLVPR+LEDG+ NGL Sbjct: 178 VGEGVYRLEGHKWFLSAPMSDAFVMLARTGGAASGDTLSEEGLSCFLVPRILEDGTLNGL 237 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 QRLK K+GNRSNA+ E+EFS+T+GFLLG + DM L LD A+ S MR Sbjct: 238 RLQRLKEKLGNRSNASSEVEFSDTYGFLLGGEGEGIRTILDMVTLTRLDCALASAGMMRA 297 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 SLAEA+H+ R R V G +LIDQP+M R +AD+AL++A ATALS RLA +FD A+ EA Sbjct: 298 SLAEAVHHCRHRRVFGELLIDQPLMARVLADLALEVAGATALSMRLARAFDNARDNPAEA 357 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A AR++ P+ KYW CK+AP+V+ E MEC+GG+GY+E+R+IARHYRE+P N+I GSGN M Sbjct: 358 AIARLLTPVVKYWVCKIAPSVLYEIMECMGGNGYVEDRAIARHYREAPVNAIWEGSGNVM 417 Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510 LDVL +L +G L + ++ DLG++G + + +LR +++ + D+G R LTE++AL Sbjct: 418 ALDVLRVLTRGRELCDVALDSINTDLGAAGPRTVDVLRACMAVAERDEGAGRLLTEQMAL 477 Query: 511 ASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 A++AA L R G +A+ F+E R ST+ ML RF+A I+D LY Sbjct: 478 AAAAAELTRLGAGHVAEAFVETRLGGAWRSTYGMLDARFDARQIVDLLY 526 >gi|90417722|ref|ZP_01225634.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90337394|gb|EAS51045.1| acyl-CoA dehydrogenase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 559 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 241/537 (44%), Positives = 342/537 (63%), Gaps = 5/537 (0%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ + G NA+ D LL L A+FP V LE G + S A +LAR+AN TP+L Sbjct: 21 NQSSDYAGFNAFRGDPLLRLLAADFPDPVLTTLERHGRFCGSFEAHDLARLANIETPRLR 80 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R + +++HPA+HAL+RRS+ DGLH SIW E R+ H +RA R Y+ A Sbjct: 81 RFDEKGRRLELIDYHPAYHALMRRSVADGLHASIWQGPEEEAGRR--HAVRATRFYMTAG 138 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GHL ++TSAS+ AL P++ W P I +R+YDP+ KAP+ K + +G+G+TEK Sbjct: 139 VECGHLCPLTMTSASVAALAAAPKLRDTWLPVIATRQYDPSVKAPLTKAGITLGMGMTEK 198 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A T++ G Y L+GHKWF+S+PMSD F++LAQ + CFL+PR +DG Sbjct: 199 QGGTDVRANTTRAVDAGGGHYRLTGHKWFMSAPMSDGFLVLAQTQEGPTCFLMPRRRDDG 258 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S NGL +QRLK+K+GNRSNA+ E+EF + +GD + +M L LD A+ S Sbjct: 259 SLNGLHFQRLKDKLGNRSNASSEVEFVDADARRVGDPGKGVKTIIEMVTLTRLDCALASA 318 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR +LAEA+H+AR R V G LI+QP M R +AD+ALD+AAAT LSFRLA +FD Sbjct: 319 GLMRGALAEAVHHARERRVFGKTLIEQPQMVRVLADMALDVAAATVLSFRLAEAFDRRTG 378 Query: 386 R---SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 +AA+AR+M P+TKYW CKMAP + EAMEC+GG+GY+E+ +AR YRE+P N+I Sbjct: 379 EAASEADAAWARVMTPVTKYWVCKMAPGLTYEAMECLGGNGYVEDGRLARAYREAPVNAI 438 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LD+ +L++ F+ + +T+E D+ + +LR ++S+ D+G R Sbjct: 439 WEGSGNVMALDLARILQRDPQAFDTVIATIEADMAETAGGTPGVLRAAMSMALADEGACR 498 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 L E++ALA ++A++ R G+ AD F E R T+ ML R ++ I++ LY Sbjct: 499 LLAEQLALAGASASMRRLGLGQTADAFTETRLGGVFRHTYGMLDLRHDSQAIVEDLY 555 >gi|254702973|ref|ZP_05164801.1| acyl-CoA dehydrogenase domain protein [Brucella suis bv. 3 str. 686] gi|261753582|ref|ZP_05997291.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261743335|gb|EEY31261.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 441 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/443 (50%), Positives = 302/443 (68%), Gaps = 4/443 (0%) Query: 12 MNQV--HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCT 69 MNQ ++P + NQ P G NAY D LL+ + A FP +H ELE G +VLS Sbjct: 1 MNQAKRNEPLKTHEVTNQTPPITGTNAYLGDPLLMQIAARFPKELHTELEQAGRFVLSAE 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 AQ+LAR+AN P+L + G R D VE+HPA+HAL+RRS+ GLH SIW+ + P+ Sbjct: 61 AQDLARLANTELPKLRTHDRQGRRIDLVEYHPAYHALMRRSVAQGLHSSIWEDN--PLES 118 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H+ RAAR YL AQLEAGHL ++TSAS+ ALM +P V+K W+P + SR+YD + K Sbjct: 119 GRRHQARAARFYLTAQLEAGHLCPLTMTSASLAALMASPEVYKQWSPAVLSRKYDFSQKP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +K V +G+G+TEK+GGTD+ A ++ + G + L+GHKWF+S+PMSDAF+ LAQ Sbjct: 179 AFRKQGVTLGMGMTEKQGGTDVRANATRAEPAIGGAWRLTGHKWFMSAPMSDAFLTLAQT 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PRL E G NG +QRLK+K+GNRSNA+ E+EF G ++G + Sbjct: 239 KEGLSCFLLPRLGEKGESNGFFFQRLKDKLGNRSNASSEVEFDGALGQMIGSPGEGVKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM L LD A+ S MR LAEA+H++R RHV G L++QP+M+R +AD+ALD+A A Sbjct: 299 MDMVTLTRLDCAVASAGLMRSGLAEAVHHSRHRHVFGKPLVEQPLMQRVLADMALDVAGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TALS RLA +FD A S EAA+AR M P+ KYW CK+APA++ EAMEC+GG+GYIE+ + Sbjct: 359 TALSMRLARAFDMAASDRAEAAFARSMTPVVKYWVCKIAPALLYEAMECLGGNGYIEDGN 418 Query: 430 IARHYRESPANSILLGSGNAMVL 452 +AR YRE+P N+I GSGN M L Sbjct: 419 LARAYREAPVNAIWEGSGNVMAL 441 >gi|254474156|ref|ZP_05087547.1| probable AidB protein [Pseudovibrio sp. JE062] gi|211956686|gb|EEA91895.1| probable AidB protein [Pseudovibrio sp. JE062] Length = 551 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 230/550 (41%), Positives = 345/550 (62%), Gaps = 4/550 (0%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS--VVHKELELLGEYVLSCT 69 M++V Q + + +NQ P + G N SD +L+A + S +EL GE + Sbjct: 1 MDKVSQATMTTGVINQAPPYCGYNLAESDPILLADLGGTGSNDSAREELIKFGEQCGAAD 60 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 A +L R+AN N P L + P G R D VEFHP++HAL+RRS GLH + + S EP Sbjct: 61 ALDLGRLANVNEPVLKTHDPYGRRLDVVEFHPSYHALMRRSFEAGLHSASVE-SMEPGGD 119 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + + RA + ++M+Q+E GHL ++T+AS +AL P + K W +I SR+YD + Sbjct: 120 RAFYN-RARKYFVMSQVEGGHLCPVTMTNASAMALTQAPELAKVWNERILSRKYDQRFRP 178 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 QK V++G+G+TEK+GG+D+ I ++ +K+SD Y ++GHKWF S+PM DAF++LA++ Sbjct: 179 ASQKMGVSLGMGMTEKQGGSDLRQIITRAEKVSDDTYVINGHKWFFSAPMCDAFLVLAKL 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E CFLVPR+LE G NGL +QRLKNK+GN+SNA+ E+EF+N GFL+G+ + Sbjct: 239 EEGPTCFLVPRILESGEVNGLDFQRLKNKLGNKSNASSEVEFNNAVGFLVGEAGKGIKTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M +D I S + MR +++ A+H+ R G LI++P+M+R +AD++LD+AA+ Sbjct: 299 LKMVTPTRVDCCIGSAALMRAAISRAVHHTSNRSAFGARLIEKPLMQRVLADMSLDMAAS 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ +LA+ D+ S+ A + RI+ P KYW CK A V AEAMEC+GG+GY+E+ Sbjct: 359 EALALKLAHCMDQEGEDSQAADFLRIITPAAKYWICKSAENVAAEAMECLGGNGYVEDHD 418 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +AR YRE+P NSI GSGN M LD+L + + + F + LE DLG +GK + +L+ Sbjct: 419 MARIYREAPVNSIWEGSGNIMALDLLRAMHRTPDSFMNVLGMLEADLGPAGKVSVEVLQA 478 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 + C ED+G AR LTE++A+ ++AAAL IA+ F+E R S++ ML R+ Sbjct: 479 AARTCLEDEGGARLLTEQLAITAAAAALKEVAPAAIANAFIETRMAGQWRSSYGMLDARY 538 Query: 550 NAAHIIDSLY 559 +A I++ LY Sbjct: 539 DAMGILEWLY 548 >gi|328543470|ref|YP_004303579.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326413214|gb|ADZ70277.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 542 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 229/543 (42%), Positives = 321/543 (59%), Gaps = 7/543 (1%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQELARM 76 P ++ NQPP + G N +SD LL+A A L G + S +L R+ Sbjct: 3 PFETHEVFNQPPRYGGGNLATSDPLLIAAHGAALDEATGAALAAHGAALGSLDVLDLGRL 62 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 A+ + P L + G R+D VE+HPA+HAL+RRS+ GLH + D P R R Sbjct: 63 ADEHAPVLKTHDIHGRRFDVVEYHPAYHALMRRSVEAGLHAASLDDGPWPQTR------R 116 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 A R ++ +Q E GH ++T+A+ L + + W P + SR YD QK V Sbjct: 117 AGRYFVTSQAETGHCCPITMTNAAGAVLKAHAQPAEGWLPLLRSRHYDQRFVPMAQKRGV 176 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+GLTEK+GGTD+ AIT+ + DG+Y L+GHKWFLS+PMSDAF++LA+ E GCF Sbjct: 177 TFGMGLTEKQGGTDLRAITTVAEPSGDGLYVLTGHKWFLSAPMSDAFLVLAKTERGPGCF 236 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVPR L DG+ NGL +QRLK K+GNRSNA+ E+EF + G L+G+ + DM + Sbjct: 237 LVPRFLPDGTVNGLRFQRLKAKLGNRSNASTEVEFQHAGGLLIGEEGRGIATILDMVVPT 296 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 +D A+ S + MR ++A A+H+ R R G L+DQP+M R +AD+ALD+AAATAL+FRL Sbjct: 297 RIDCALGSAAQMRAAVARAVHHCRHRQAFGARLVDQPLMTRVLADMALDVAAATALAFRL 356 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D + EAAY R+M P KYW CK AP + EAMEC+GG+GY+E+ +AR YR+ Sbjct: 357 VRAADCMADDAAEAAYVRLMTPAIKYWICKAAPLLTYEAMECLGGNGYVEDFDMARLYRD 416 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 +P N+I GSGN M LDVL LE+ E + + LG G ++ + +E Sbjct: 417 APVNAIWEGSGNVMALDVLRALERTPAALEAVLAEFAGRLGRGGAAAGEVIAAAARAARE 476 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 D R LTE++AL +AAAL +AD F+E+R S++ ML GR NA +++ Sbjct: 477 DPSNGRILTEQLALTGAAAALRAIAPEPVADAFIESRLAGQWRSSYGMLPGRHNARRLVE 536 Query: 557 SLY 559 +LY Sbjct: 537 ALY 539 >gi|154253277|ref|YP_001414101.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157227|gb|ABS64444.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 563 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 209/558 (37%), Positives = 314/558 (56%), Gaps = 16/558 (2%) Query: 13 NQVHQPSDSLFA----LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLS 67 V P+D FA NQPP +N ++SD L +A L G+ V S Sbjct: 3 KHVETPAD--FATHEVFNQPPPLEDVNLFTSDKALRETVAREGAGDAEASLTAFGKIVGS 60 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD---RSF 124 +L R AN P L ++ G R D+VEFHP++H L+ S+ GLH S WD Sbjct: 61 AETIDLGRQANAYLPVLKSFDRFGHRADRVEFHPSYHKLMAISVAQGLHGSPWDHLKNGL 120 Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184 + + A R A Y+M Q+EAGH ++T+AS+ AL+ P + K+W P+I SREYD Sbjct: 121 DASPKPGAVVARLAGTYMMTQVEAGHGCPITMTNASVPALLFQPSLAKEWIPRILSREYD 180 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMS 240 +K V +G+G+TEK+GGTD+ A T++ ++ G Y ++GHKWF S+PM Sbjct: 181 ERFIPAGEKAGVTLGMGMTEKQGGTDVRANTTEAVPVNGGGPGAEYRITGHKWFFSAPMC 240 Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 DAF++LAQ + CFL+PR DG PN + QRLK+K+GN+SNA+ E+EF G+L+G Sbjct: 241 DAFLVLAQAPNGISCFLMPRFTPDGEPNAIRIQRLKDKVGNKSNASSEVEFQAASGWLIG 300 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + +M LD A+ + MR ++++A+H+ R V LIDQP+M +A Sbjct: 301 EEGRGVRNIIEMATYTRLDCAVATAGMMRQAVSQAVHHCSYRTVFQKKLIDQPLMANVLA 360 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+AL+ AATALSFR+A SFD A EAA+ RIM P+ KYW CK AP + EAMEC+G Sbjct: 361 DLALETEAATALSFRVARSFDRAHEDEAEAAFRRIMTPVAKYWVCKRAPNLAYEAMECLG 420 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 G+GY+EE R YRE P N+I GSGN M LDVL L + + +F+ L++ G++ Sbjct: 421 GNGYVEEGIAGRIYREMPVNAIWEGSGNVMCLDVLRALMREPQALDVVFAELDRAKGANA 480 Query: 481 --KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538 + L+++ + +G +R + E++A ++ + L + + ++D + R + Sbjct: 481 AYDGALDALKEAFADFGSLEGRSRQVVEQMAKVAAGSVLLQHAPSFVSDAYCATRLGRDW 540 Query: 539 HSTHCMLHGRFNAAHIID 556 + L + A I++ Sbjct: 541 GDLYGTLPAGADIAAIVE 558 >gi|222874481|gb|EEF11612.1| predicted protein [Populus trichocarpa] Length = 360 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 181/357 (50%), Positives = 256/357 (71%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M+ P + + WAP++ +R+YD N+ QK V +G+G+TEK+GGTD+ A T++ + +G Sbjct: 1 MSNPALFRAWAPRVIARKYDNANRPAAQKQGVTLGMGMTEKQGGTDVRANTTRAEPAGEG 60 Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +Y L+GHKWF+S+PMSD F++LAQ E + CFL+PR+ +DG+ NG +QRLK+K+GNRSN Sbjct: 61 LYRLNGHKWFMSAPMSDGFLVLAQAEEGLSCFLLPRVTDDGATNGFRFQRLKDKLGNRSN 120 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 A+ E+EF G+L+G+ + DM L LD A+ S MR +LAEA+H+AR R V Sbjct: 121 ASSEVEFEGALGYLVGEPGAGIRTIMDMVTLTRLDCALASSGLMRAALAEAVHHARHRSV 180 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G L +QP+M R +AD+ALD+AAATAL+FRLA SFDEA + EAAYAR+M P+TKYW Sbjct: 181 FGKALFEQPLMNRVLADLALDVAAATALAFRLARSFDEAANGRAEAAYARVMTPVTKYWV 240 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 CK+APAVI EAMEC+GG+GY+EE +AR+YRE+P N+I GSGN M LDVL +L + L Sbjct: 241 CKIAPAVIYEAMECLGGNGYVEEAPLARYYREAPVNAIWEGSGNVMALDVLRVLSRNAGL 300 Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521 F+ + + DLG +G + +L ++ +C+ D+G R LTE++ALA++AA L R G Sbjct: 301 FDDVLQGMAADLGPAGSGTVEVLSAAMRVCESDEGAGRILTEQLALAAAAAELKRLG 357 >gi|146341411|ref|YP_001206459.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146194217|emb|CAL78239.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation damage) [Bradyrhizobium sp. ORS278] Length = 547 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 195/458 (42%), Positives = 278/458 (60%), Gaps = 4/458 (0%) Query: 17 QPS-DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74 QPS ++ NQ P F +N +++D L+ A+ AN S +EL G+ S E Sbjct: 3 QPSLETHEVFNQSPPFADVNLFTADRPLMDAVAANGGSGAEQELIAFGKLWGSAEMAEQG 62 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 R+AN NTP+L ++ G R D VEFHPA+H ++ +++ GLH S W +PV A Sbjct: 63 RLANENTPKLRSFDAKGFRRDAVEFHPAYHHMMAQAVAAGLHNSTWTAQGKPV-GGSAEV 121 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 +RAA+ Y+ +Q+E+GHL ++T AS+ AL P + I +R+YDP QK Sbjct: 122 VRAAKFYVASQVESGHLCPITMTRASVAALAPQPDLLAQTMRVIATRDYDPAFAPWWQKR 181 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+G+TEK+GGTD+ A + + +DG Y ++GHKWF+S+PM DAF++LAQ EG + Sbjct: 182 GMTLGMGMTEKQGGTDVRANMTSATRSTDG-YRITGHKWFMSAPMCDAFLVLAQAEGGLT 240 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF +PR DG+ N L +QRLK+K+GNRSNA+ E+EF+ + +G+ + M Sbjct: 241 CFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAERVGEEGRGISTIIQMVQ 300 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L D AI S MR LA A+H+AR R V L DQP+M+ +AD+AL + A AL Sbjct: 301 LTRQDCAISSAGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLADMALHVEATVALVM 360 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL +FD ++EAAY R++ P KYW CK AP + EAMEC+GG+GY+E+ +ARHY Sbjct: 361 RLCRAFDRMTDDADEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILARHY 420 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 RESP N+I GSGN M LDVL L + + +TL Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSREPEAAAAVLNTL 458 >gi|299135139|ref|ZP_07028330.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] gi|298590116|gb|EFI50320.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] Length = 543 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 193/437 (44%), Positives = 267/437 (61%), Gaps = 3/437 (0%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83 LNQ P F +N + D L+ ++ + + H +EL L G S E R+AN N P+ Sbjct: 8 LNQSPPFCDINLFGCDVPLMEAVSAYGARDHAEELSLFGRLWGSAAMAERGRLANENPPK 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G R D+VEFHPA+H L+ S H GLH S W + A +RAA+ ++ Sbjct: 68 LKTYDARGFRRDEVEFHPAYHELMAHSAHAGLHNSTWSGAGT-SAGGAAEVVRAAKFFIA 126 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL + + P + + YDP QK + IG+G+T Sbjct: 127 AQVETGHLCPITMTRASVAALASDEALRVQIMPVLGTNVYDPAFMPWWQKRGMTIGMGMT 186 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ A ++ ++ D Y ++GHKWF+S+PMSDAF++LAQVEG + CF++PR Sbjct: 187 EKQGGTDVRANVTRAEREGD-YYRITGHKWFMSAPMSDAFLVLAQVEGGLTCFVMPRFAP 245 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG+ N L +QRLK+K+GNRSNA+ E+EF + LG+ + M L D AI Sbjct: 246 DGTVNALRFQRLKDKLGNRSNASSEVEFEGAYALRLGEEGRGIATIIQMVSLTRQDCAIA 305 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR LA A+H+AR R V G L DQP+M+ +AD+AL + A TAL RL +FD A Sbjct: 306 SAGLMRSGLAHALHHARHRSVFGRHLADQPLMRSVLADMALHVEATTALVMRLCRAFDHA 365 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E+A R+M P+ KYW CK APA + EAMEC+GG+GY+EE +ARHYRE+P N+I Sbjct: 366 PHDPVESATMRLMTPVVKYWVCKSAPAFLHEAMECLGGNGYVEEGILARHYREAPVNAIW 425 Query: 444 LGSGNAMVLDVLNLLEK 460 GSGN M LDVL ++ + Sbjct: 426 EGSGNVMCLDVLRVVSR 442 >gi|86749547|ref|YP_486043.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86572575|gb|ABD07132.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 549 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 197/484 (40%), Positives = 281/484 (58%), Gaps = 4/484 (0%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P F ++ + +D LV A+ N H ELE G S E R+AN TP+ Sbjct: 12 FNQSPPFEEVDLFGTDRPLVEAVTFNNGGHAHVELEAFGRNWGSAHMAERGRLANEQTPK 71 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHPA+H L+ S H G+H S WD + +P A +RAA+ Y+ Sbjct: 72 LKTFDAKGLRRDQVEFHPAYHELMSESFHAGIHNSTWDHNGQPA-GGSAEVVRAAKFYMA 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL P + P + S+ YDP +K +++G+G+T Sbjct: 131 AQVETGHLCPVTMTRASVAALAAQPELLAQIMPVLSSKRYDPAFAPWSEKRGMSVGMGMT 190 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ + ++ + D Y + GHKWF+S+PM DAF++LAQ E + CF +PR Sbjct: 191 EKQGGTDVRSNATRAIRDGDA-YRIIGHKWFMSAPMCDAFLVLAQAEEGLSCFFMPRFKP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+ + M L D AI Sbjct: 250 DGSINDIQFQRLKDKLGNRSNASSEVEFTGAYAVPVGEPGRGIRTIIQMVQLTRQDCAIA 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR LA A+H+AR R V LID +M+ +AD+AL + A+ AL RL +FD+A Sbjct: 310 SAGLMRSGLAHALHHARHRSVFQKHLIDHSLMQSVLADMALQVEASVALVMRLCRAFDQA 369 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 EAAY R+M P KYW CK AP + EAMEC+GG+GY+E+ +ARHYRE+P N+I Sbjct: 370 PHDHLEAAYMRLMTPAVKYWVCKSAPPFLYEAMECMGGNGYVEDGILARHYREAPVNAIW 429 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL + + ++ ++ +L QD G +G L L +++ AR Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQSLIQDTAGLTGGPAAASLVARAFLQADNERTAR 489 Query: 503 FLTE 506 E Sbjct: 490 LAVE 493 >gi|254503843|ref|ZP_05115994.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222439914|gb|EEE46593.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 559 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 215/536 (40%), Positives = 313/536 (58%), Gaps = 7/536 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P + G N + D LL+A ++ S K++ G V + EL R AN + P Sbjct: 26 FNQAPPYGGSNLAAGDPLLLATVSAHVSAWELKDVLAHGAEVGAEAFLELGRQANIHLPA 85 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHPA+H L+ S G+H ++ D + +RAA+ +L Sbjct: 86 LKTHDRHGRRLDQVEFHPAYHDLMAHSFSAGMHSALLDGGVSTQL------VRAAKFFLT 139 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q E GH ++T+A+ + P V D PK+ +R YDP +KT + IG+G+T Sbjct: 140 SQAETGHTCPITMTNAAAAVMAQYPDVCADLLPKMQTRTYDPRFLPMHEKTGITIGMGMT 199 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ AI+S + + G Y ++GHKWF S+PM DAF++LA+ CFL+PR+L Sbjct: 200 EKQGGTDLRAISSTAEAGNQGSYAITGHKWFFSAPMCDAFLVLAKTANGPSCFLIPRILA 259 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG NGL +QRLK+K+GN+SNA+ E+EF G+LLGD + DM +D A+ Sbjct: 260 DGRVNGLRFQRLKDKLGNKSNASSEVEFHRAEGYLLGDEGRGIATIIDMVTPTRIDCALG 319 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR +++ A+H+ R R G LIDQP+M +AD+ALD+AAATAL+ RL + + Sbjct: 320 SAGQMRAAVSRAVHHCRHRKTFGAYLIDQPLMTAVLADMALDVAAATALALRLVRAAAKV 379 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 ++ EAAYAR++ P KYW CK PA+ EAMEC+GG+GY+E+ +AR YR++P N I Sbjct: 380 ETDPVEAAYARLLTPAIKYWICKTGPALTYEAMECLGGNGYVEDYDMARIYRDAPVNPIW 439 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 GSGN M LDVL L + + S L + G+S + L + D AR Sbjct: 440 EGSGNVMALDVLRALGRHPEAPNLVLSELSKSGGASLSAACSGLPSLAAQALADPAHARV 499 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 LTE++AL ++ AAL ++D+AD F + R ST+ +L +AA I++SLY Sbjct: 500 LTERLALTAAVAALKELQLDDVADAFAKTRLSGGWRSTYGILPAGIDAAGILESLY 555 >gi|209884925|ref|YP_002288782.1| protein AidB [Oligotropha carboxidovorans OM5] gi|209873121|gb|ACI92917.1| protein AidB [Oligotropha carboxidovorans OM5] Length = 537 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 192/451 (42%), Positives = 267/451 (59%), Gaps = 3/451 (0%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83 LNQ P F ++ ++ D L +A + + H EL G+ S EL R+AN N P+ Sbjct: 2 LNQSPPFCDVDLFACDVPLKEAVAAYGAKDHTTELSAFGKLWGSAEMAELGRLANENLPK 61 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHPA+H L+ S H GLH S W S A +RAA+ ++ Sbjct: 62 LQTFDARGFRRDEVEFHPAYHELMAVSAHAGLHNSTWASS-GAAAGGNAEVLRAAKFFIA 120 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL + + P + R YDP K + IG+G+T Sbjct: 121 AQVETGHLCPITMTRASVAALASNEALRARIMPVLSQRAYDPGFAPWWGKRGMTIGMGMT 180 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 E++GGTD+ S+ ++ + Y + GHKWF+S+PM DAF++LAQ +G + CF +PR Sbjct: 181 ERQGGTDVRVNISRAERDGEA-YRIIGHKWFMSAPMCDAFLVLAQTDGGLTCFFMPRFTP 239 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG N L +QRLKNK+GNRSNA+ E+EF + LG+ + M L D AI Sbjct: 240 DGEINALHFQRLKNKLGNRSNASSEVEFEAAYALRLGEEGRGVATIIQMVSLTRQDCAIA 299 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR LA A+H+AR R V L DQP+M+ +AD+AL + AATAL RL +FD A Sbjct: 300 SAGLMRSGLAHALHHARHRSVFQKRLADQPLMRSVLADMALQVEAATALVMRLCRAFDRA 359 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A R+M P+ KYW CK APA + EAMEC+GG+GY+EE +ARHYRE+P N+I Sbjct: 360 STDPNENATMRLMTPVVKYWVCKSAPAFLYEAMECLGGNGYVEEGILARHYREAPVNAIW 419 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 GSGN M LDVL ++ + + E + + LE+ Sbjct: 420 EGSGNVMCLDVLRVMTREREVAEAVLADLER 450 >gi|27380208|ref|NP_771737.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27353362|dbj|BAC50362.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 547 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 190/446 (42%), Positives = 271/446 (60%), Gaps = 4/446 (0%) Query: 17 QPSDSLF-ALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELA 74 QPS + NQ PLF ++ ++ D LV A+ AN + +EL G++ S + Sbjct: 3 QPSFATHEVFNQSPLFWDVDLFAVDRPLVEAVKANGGAKAERELSEFGKHWGSAAMADRG 62 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 R+AN NTP+L + G R D+VEFHPA+H L+ S H G+H S W +P A Sbjct: 63 RVANENTPKLRTFDAKGNRRDQVEFHPAYHELMAHSAHAGVHNSTWTADGKPA-GDAAEV 121 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 IRAA+ Y+ +Q+E GHL ++T AS+ AL T P + P + ++ YDPT K Sbjct: 122 IRAAKFYIASQVETGHLCPITMTRASVAALATQPDLLARVMPVLATKSYDPTFAPWWGKR 181 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+G+TEK+GGTD+ A ++ + D Y ++GHKWF+S+PM DAF++LAQ + + Sbjct: 182 GMTLGIGMTEKQGGTDVRANMTRAVRDGDA-YRITGHKWFMSAPMCDAFLVLAQADEGLT 240 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF +PR DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+ + M Sbjct: 241 CFFMPRFAPDGSVNAIQFQRLKDKLGNRSNASSEVEFAGAYAQAVGEAGKGIRTIIQMVQ 300 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L D AI S MR LA A+H+AR R V L DQP+M+ ++D+AL + A+ AL Sbjct: 301 LTRQDCAIASTGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLSDMALHVEASVALVM 360 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL +FD + EAAY R++ P KYW CK AP+ + EAMEC+GG+GY+E+ +ARHY Sbjct: 361 RLCRAFDRTPHDAAEAAYMRLLTPAIKYWTCKSAPSFLYEAMECLGGNGYVEDGILARHY 420 Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460 RESP N+I GSGN M LDVL L + Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSR 446 >gi|92117804|ref|YP_577533.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14] gi|91800698|gb|ABE63073.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 547 Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 188/432 (43%), Positives = 263/432 (60%), Gaps = 3/432 (0%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P ++ ++ D+ L A+ AN EL G + S R+AN N P+ Sbjct: 12 FNQSPPLEDVDLFALDAPLAEAVAANGGKAASGELSEFGRHWGSAAMASRGRLANENPPK 71 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHPA+H L+ S H GLH S W +P A +RAAR Y+ Sbjct: 72 LRLFDACGNRRDEVEFHPAYHELMAHSAHAGLHNSTWTADGKPA-GGAAEVVRAARFYMA 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL T P+V P I +R YDP+ K + +G+G+T Sbjct: 131 AQVETGHLCPITMTRASVAALATGPQVLAKAMPLIATRSYDPSFAPWSTKRGMTLGMGMT 190 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ A ++ ++ G Y ++GHKWF+S+PM DAF++LAQ +G + CF +PR Sbjct: 191 EKQGGTDVRANQTRAER-DGGAYRITGHKWFMSAPMCDAFLVLAQADGGLTCFFMPRFQP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+ + M L D AI Sbjct: 250 DGSVNEIHFQRLKDKLGNRSNASSEVEFTGAYAERVGEEGKGIRTIIQMVQLTRQDCAIA 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 SV MR LA A+H+ R R V L DQP+M+ +AD+AL + A+ AL RL +FDEA Sbjct: 310 SVGLMRSGLAHALHHTRYRSVFQKHLADQPLMQAVLADMALHVEASVALVMRLCRAFDEA 369 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + ++ AA+ R++ P KYW CK AP + EAMEC+GG+GY+EE +ARHYRE+P N+I Sbjct: 370 STDAKAAAWMRLLTPAVKYWTCKSAPGFLYEAMECLGGNGYVEESILARHYREAPVNAIW 429 Query: 444 LGSGNAMVLDVL 455 GSGN M LDVL Sbjct: 430 EGSGNVMCLDVL 441 >gi|91977493|ref|YP_570152.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91683949|gb|ABE40251.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 551 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 198/495 (40%), Positives = 288/495 (58%), Gaps = 10/495 (2%) Query: 19 SDSLFA----LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQEL 73 ++S+FA NQ P F ++ + +D LV +A N S H ELE G S + Sbjct: 4 TESVFATHEVFNQSPPFEDVDLFGADRPLVEAVALNQGSYAHVELEAFGRNWGSAHMADR 63 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN ++P+L ++ G+R D+VEFHPA+H L+ S H G+H S WD P A Sbjct: 64 GRLANEHSPRLKSFDAKGQRRDQVEFHPAYHELMSESFHAGIHNSTWDGRGRPA-GGSAE 122 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 +RAA+ Y+ AQ+E GHL ++T AS+ A+ P + P + ++ YD +K Sbjct: 123 VVRAAKFYMAAQVETGHLCPVTMTRASVAAIAAQPDLLAQVMPVLGTKRYDSAFAPWSEK 182 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 ++IG+G+TEK+GGTD+ + ++ I DG Y + GHKWF+S+PM DAF++LAQ + Sbjct: 183 RGMSIGMGMTEKQGGTDVRSNATRA--IRDGEAYRIIGHKWFMSAPMCDAFLVLAQADEG 240 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF +PR DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+ + M Sbjct: 241 LSCFFMPRFKPDGSVNDIQFQRLKDKLGNRSNASSEVEFAGAYAVPVGEPGRGIRTIIQM 300 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D AI S MR LA A+H+AR R V LID +M+ +AD+AL + A AL Sbjct: 301 VQLTRQDCAIASAGLMRSGLAHALHHARHRSVFQKHLIDHSLMRSVLADMALQVEATVAL 360 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 RL +FD+A EAAY R+M P KYW CK AP ++ EAMEC+GG+GY+E+ +AR Sbjct: 361 VMRLCRAFDQAPHDHLEAAYMRLMTPAVKYWVCKSAPPLVYEAMECLGGNGYVEDGILAR 420 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSI 491 HYRE+P N+I GSGN M LDVL + + ++ ++ L QD G +G L Sbjct: 421 HYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQGLIQDTAGLTGGPAAASLVARA 480 Query: 492 SLCKEDKGLARFLTE 506 L +++ AR E Sbjct: 481 FLQADNERTARLAVE 495 >gi|302549579|ref|ZP_07301921.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736] gi|302467197|gb|EFL30290.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736] Length = 555 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 205/511 (40%), Positives = 283/511 (55%), Gaps = 7/511 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P +A +LL L +EL LG S AQE A +AN + P+L Sbjct: 21 NQAPPLAPYDASDDPALLEGLRREGAGWAEEELRRLGRQAGSAQAQEWADLANRHEPELR 80 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP+WH L+R +I +GL S W R AH R+A + Sbjct: 81 THDRYGNRVDEVEFHPSWHHLMRTAIAEGLAASPWADD-----RPGAHVARSAGGLVWGH 135 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 EAGH S+T A++ AL P + K + P + SREY+P + P +K + G+G+TEK Sbjct: 136 TEAGHGCPTSMTYAAVPALRRQPELAKVYEPLLTSREYEPGLRVPSEKRGLLAGMGMTEK 195 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ T+ ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 196 QGGSDVRTNTTTATPTAESGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 255 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N QRLK+K+GNRSNA+ E EF T +L+G + +M LD +MS Sbjct: 256 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 315 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 + MR SL EA H+AR R G L+DQP M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 316 AALMRKSLVEAGHHARHRSAFGARLVDQPAMRNVLADLALESEAATTLTLRLAGAADRAI 375 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + E+A+ RI + KYW K PA AEA+EC+GG+GY+E+ + RHYRE+P SI Sbjct: 376 RGDAGESAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIW 435 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 GSGN LDVL L + E LF+ L G+ + + R L + + AR Sbjct: 436 EGSGNVNALDVLRALSREPGTAEALFAELALARGADARLDAAVTRLRNRLPEASQATARR 495 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534 L E+ AL A+ L R +AD F R Sbjct: 496 LVEQTALTLQASLLVRHAPPAVADAFCATRL 526 >gi|148256072|ref|YP_001240657.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146408245|gb|ABQ36751.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation damage) [Bradyrhizobium sp. BTAi1] Length = 547 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 192/461 (41%), Positives = 270/461 (58%), Gaps = 4/461 (0%) Query: 17 QPS-DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELA 74 QPS ++ NQ P F +N +++D LV A+ A + EL G S E Sbjct: 3 QPSFETHDVFNQSPPFADVNLFTADRPLVDAVTAYGAAGTEPELAAFGALWGSAEMAEQG 62 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 R+AN NTP+L ++ G R D VEFHPA+H ++ R++ GLH S W P + Sbjct: 63 RLANENTPKLRSFDAKGFRRDVVEFHPAYHQMMARAVEAGLHNSTWTSEGRPR-GAPSEV 121 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 +RAA+ Y+ AQ+E+GHL ++T AS+ AL P + P I +R YD QK Sbjct: 122 VRAAKFYIAAQVESGHLCPITMTRASVAALAAQPDLLAKSMPVIATRHYDAAFAPWWQKR 181 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+G+TEK+GGTD+ A + ++ DG Y ++GHKWF+S+PM DAF++LAQ E + Sbjct: 182 GMTLGMGMTEKQGGTDVRANMTTAERAGDG-YRITGHKWFMSAPMCDAFLVLAQAESGLT 240 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF +PR DG+ N L +QRLK+K+GNRSNA+ E+EF+ + +G+ + M Sbjct: 241 CFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAVRVGEEGRGIRTIIQMVQ 300 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L D AI S MR LA A+H+AR R V L DQP+M+ +AD+AL + A AL Sbjct: 301 LTRQDCAISSAGLMRSGLAHALHHARHRSVFQKRLADQPLMQAVLADMALHVEATVALVM 360 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL +FD +EAAY R++ P KYW CK AP + EAMEC+GG+GY+E+ +ARH+ Sbjct: 361 RLCRAFDRTPDDLKEAAYMRLLTPAIKYWVCKSAPPFLYEAMECLGGNGYVEDGILARHF 420 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 RESP N+I GSGN M LDVL L + + + L D Sbjct: 421 RESPVNAIWEGSGNVMCLDVLRALSREADAAMAILKYLAAD 461 >gi|271967959|ref|YP_003342155.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] gi|270511134|gb|ACZ89412.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] Length = 539 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 204/535 (38%), Positives = 290/535 (54%), Gaps = 8/535 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G + + +LL L EL LG S A E R+AN + P L Sbjct: 6 FNQAPPLTGHDVSADAALLAGLAREDAGWATGELHRLGTLAGSDQAGEWGRLANEHPPVL 65 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPAWH L+ ++ +GLH + W + R AH RAA+ Y+ + Sbjct: 66 RTHDRYGHRIDEVEFHPAWHELMTVAVENGLHATPWSSA-----RPGAHMARAAKFYVWS 120 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH S+T AS+ AL +P + DW P + SR YD + P+ K V G+ +TE Sbjct: 121 QVEAGHGCPISMTYASVAALRHSPALAADWEPALASRSYDFGLRPPLGKRGVLAGMAMTE 180 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ + +SDG Y L+GHKWF S+PM D F++LAQ G + CFL+PR+L D Sbjct: 181 KQGGSDVRAGTTRAEPLSDGSYALTGHKWFNSAPMCDVFLVLAQAPGGLSCFLLPRVLPD 240 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + RLK+K+GNRSNA+ E+E+ +L+G+ + +M + LD I S Sbjct: 241 GTRNAVHLMRLKDKLGNRSNASAEVEYHGAVAWLVGEEGRGVRTILEMVNMTRLDCVIGS 300 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +GMR + A+H+A R G LIDQP+M+ +AD+AL+ AAT L RLA + D A Sbjct: 301 AAGMRYGVTRAVHHAAHRGAFGRKLIDQPLMRNVLADLALESEAATTLMTRLAGATDRAI 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E+A R + KYW CK P AEA+EC+GG+GY+EE + R +RESP N I Sbjct: 361 AGDRAESALRRTALAVGKYWVCKRGPVHAAEALECLGGNGYVEESQMPRLFRESPLNGIW 420 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLA 501 GSGN LDVL L + E F+ + G+ LR S+ + + A Sbjct: 421 EGSGNVAALDVLRALGREPEALEAFFAEVSLAAGADRHLDDAADRLRKSLGDLTDIEARA 480 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + E +AL A+ L R +AD F +R L R + +I+ Sbjct: 481 RRVAEDMALVLQASLLVRLAPPAVADAFCASRLAGEAGRAFGTLPPRLDLDALIE 535 >gi|331694767|ref|YP_004331006.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326949456|gb|AEA23153.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 704 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 204/515 (39%), Positives = 292/515 (56%), Gaps = 14/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G + + D LV A+ + LGE + S +E AR+AN N P L Sbjct: 176 NQPPPLSGYDPLACDPALVDAVEREGAGGALPTMRQLGERIASPEYREHARLANENHPIL 235 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHP+WHAL+ S+ GLH + W +P AH RAA YL+ Sbjct: 236 RTHDRYGHRVDEVEFHPSWHALMDLSVGWGLHAAPW--LADPGT--GAHVARAAGFYLVG 291 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE GH S+T AS+ AL + + P + +REY P P KT + G+ +TE Sbjct: 292 QLEQGHCCPISMTYASVPALRHDDELAAAYVPGLTAREYQPGLARPDSKTGLLAGMSMTE 351 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+ SDG Y L+GHKWF S+PM+D F+ LAQ + CF++PR+L D Sbjct: 352 KQGGSDVRAGTTVATPSSDGTYRLTGHKWFTSAPMNDLFLTLAQAPAGLTCFVLPRVLPD 411 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLK+K+GNRSNA+ ELE+ + G+ LG+ + +M + LD I S Sbjct: 412 GTRNAIRLQRLKDKLGNRSNASAELEYDDAVGWRLGEEGRGVVTIIEMVSMTRLDCVIGS 471 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 S +R +L EA+H+ R G L+DQP+M+ +AD+AL+ AATAL+ RLA + D Sbjct: 472 ASVIRAALTEAVHHVTHRRAFGERLVDQPLMQAVVADLALESEAATALTMRLAGAVDRG- 530 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E + R+ P +KY CK APAV+AEA+EC+GG+GY+EE + R YRE+P NS+ Sbjct: 531 ----ETDFLRLALPASKYLVCKRAPAVVAEALECLGGNGYVEESGMPRLYREAPLNSVWE 586 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502 GSGN LDVL + + + E + ++ G+ + T LR L ++ AR Sbjct: 587 GSGNVTALDVLRAVTREPDSQEAVLREIDAAAGADSWFDRARTELR--TELRSREQRTAR 644 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 L E +AL + L R ++A F+ +RFL + Sbjct: 645 RLAELLALCMQGSLLLRFAPEEVASAFVSSRFLPD 679 >gi|170740350|ref|YP_001769005.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168194624|gb|ACA16571.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 538 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 194/432 (44%), Positives = 261/432 (60%), Gaps = 6/432 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 LNQ F +N ++D+ L AL AN L G + E R+AN N P+ Sbjct: 7 LNQSTPFADVNLIAADAPLRGALRANGVDPDEPGLAAFGAEWGAAERLEGGRLANENPPR 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHPA+HAL+R S+ GLH S+WD + + + H RAARLY + Sbjct: 67 LRTHDASGRRADRVEFHPAYHALMRASVGAGLHASLWDGAAPALPFGRGHVARAARLYAV 126 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 A +E+GHL ++TSA++ AL P W P++ SR YDP + +K V +G+G+T Sbjct: 127 AGVESGHLCPMTMTSAAVAALAAAPDHLAAWWPRLTSRRYDPEFRPWFEKAGVTLGMGMT 186 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ A T+ + D +Y L+GHKWF S+PM DAF++LAQ + CFLVPR Sbjct: 187 EKQGGTDVRANTTAARPAGDDVYHLTGHKWFFSAPMCDAFLVLAQAPDGLSCFLVPRHRP 246 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 D S N L QRLK+K+GNRSNA+ E+EF FG+ LG+ + M L LD A+ Sbjct: 247 DRSVNALRLQRLKDKLGNRSNASAEVEFEEAFGWRLGEEGRGLRTILAMVQLTRLDCAVA 306 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S R++LA A+H+AR R G L DQP M+ +AD+AL + A AL RL+ SFD Sbjct: 307 SAGLGRMALALALHHARHRSAFGRPLADQPAMRAVLADLALAVEAQVALVMRLSASFDRG 366 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 EA AR++ P KY CK AP ++AEAMEC+GG+GY+EE + R YRE+P N+I Sbjct: 367 -----EAVRARLLTPAAKYAVCKAAPGLVAEAMECLGGNGYVEENPLPRLYREAPVNAIW 421 Query: 444 LGSGNAMVLDVL 455 GSGN M LDVL Sbjct: 422 EGSGNVMALDVL 433 >gi|239995841|ref|ZP_04716365.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Alteromonas macleodii ATCC 27126] Length = 535 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 202/524 (38%), Positives = 299/524 (57%), Gaps = 15/524 (2%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEY--VLSCTAQELARMANYNTP 82 NQP + N + D+LL V ++ + PS + LLG+Y + +AN N P Sbjct: 14 NQPTISTPYNLWRDDTLLRVLVVQHLPSSHQHDEGLLGQYGQIAGDALMAHGELANKNKP 73 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 LH + G R D VEFHP++HAL+ ++ H W E + + AH RAA +Y+ Sbjct: 74 TLHTFDRYGRRIDDVEFHPSYHALMESAMQHNAHNYSWKH--EGI--EGAHTFRAALMYM 129 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E+G ++T A++ A+ ++ + K + YDP + QK + IG+G+ Sbjct: 130 HYQAESGTSCPLTMTHAAIPAMRYGKQLPPVYLEKTINGVYDPRSLPASQKHGLTIGMGM 189 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ T+ K +DG Y + GHK+F S+PM DA ++LAQ EG + CFL+PRLL Sbjct: 190 TEKQGGSDVRRNTTTAVKQADGSYHIVGHKFFFSAPMCDAHLILAQAEGGLSCFLLPRLL 249 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 E+G+ N + QRLK+K+G+ SNA+ E+EF +L+G+ + DM L LD I Sbjct: 250 ENGALNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVPVIIDMVSLTRLDCMI 309 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + MR SL A+H+ R G L++QP+M+ +AD+ ++ AAATAL+ R+A + D Sbjct: 310 GSSALMRQSLIHALHHVSHRDAFGKTLVNQPLMQNVLADLTIECAAATALTMRVAKAVDS 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A S + EAA AR+ I KYW CK P + EA EC+GG GY+EE + R+YR++P NSI Sbjct: 370 ASSDNHEAALARLATAIGKYWVCKRTPMFVNEAQECLGGIGYVEENPMPRYYRQAPLNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGL 500 GSGN LDVL L K ++ E LFS L+ G + I + L D +S + + Sbjct: 430 WEGSGNVQCLDVLRALAKEPSVKEALFSELKTQAGKNKHYDIHLSKLFDELSNTQNMETR 489 Query: 501 ARFLTEKIALASSAAALYRAGMN------DIADVFLENRFLDNC 538 +R+LTE++ALA A +L +N DIA F E+R + C Sbjct: 490 SRYLTEQMALALQACSLLATSLNNDNALIDIAHTFCESRLGNAC 533 >gi|239983292|ref|ZP_04705816.1| putative oxidoreductase [Streptomyces albus J1074] gi|291455120|ref|ZP_06594510.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291358069|gb|EFE84971.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 545 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 203/514 (39%), Positives = 288/514 (56%), Gaps = 12/514 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G + + D +L+ + + H EL G Y S AQ A AN + P+L Sbjct: 13 NQAPPLTGHD-VADDPVLLEGVRREGAAWHLPELHRFGRYAGSEEAQHRADQANRHEPEL 71 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPA+HAL+ S+ GL + W R AH RAA + Sbjct: 72 RTHDRYGHRVDEVEFHPAYHALMDASVSAGLAGAAWADE-----RTGAHVARAAGFMVAT 126 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +E GHL S+T A + AL P + K + P + SR YDP + P K + G+G+TE Sbjct: 127 TVEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRTPAGKRGLLAGMGMTE 186 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ A T+ + DG + L GHKWF S+PM+D F++LAQ G + CFLVPR+L D Sbjct: 187 KQGGTDVRANTTTATEQGDGTWLLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPD 246 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK+K+GNRSNA+ E EF T +L+GD + +M + LD + S Sbjct: 247 GSRNTFRIQRLKDKLGNRSNASSEPEFDATVAWLVGDEGKGVRTIIEMVTMTRLDCVLGS 306 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +G R +L +A H+AR R V G LIDQP+M+ +AD+AL+ AAT L+ RLA + D A+ Sbjct: 307 AAGTRAALVQAAHHARHRSVFGAKLIDQPLMRNVLADLALESEAATTLALRLAGAADRAR 366 Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E A+ R+ + KYW CK PA +AEA+EC+GG+GY E + R YRE+P N I Sbjct: 367 RDDPGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 426 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD---SISLCKEDKGL 500 GSGN LD+L L + E + +E G+ +++ T R+ ++L ++ + Sbjct: 427 EGSGNVNALDMLRALAREPESLEAFRAEIEAASGAD-RRLDTAWRELQSRLTLTEDAELR 485 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E+ AL A+ L R +AD F +R Sbjct: 486 ARRVIERAALVLQASLLVRHAPTPVADAFCASRL 519 >gi|126348365|emb|CAJ90087.1| putative oxidoreductase [Streptomyces ambofaciens ATCC 23877] Length = 567 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 199/511 (38%), Positives = 279/511 (54%), Gaps = 7/511 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +A+ +L L +EL LG S AQE +AN + P L Sbjct: 33 NQPPPLAPYDAFDDTALREGLRREGAGWAEEELRRLGRRAGSVAAQEWGDLANRHEPVLR 92 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+HP+WH L+R ++ +GL + W R AH R A + Sbjct: 93 THDRYGNRVDEVEYHPSWHRLMRVAVGEGLAGAPWADD-----RPGAHVARTAGGLVWGH 147 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 EAGH S+T A++ AL P + K + P + SREY+P + P +K + G+G+TEK Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPDLAKVYEPLLTSREYEPGLRTPTEKRGLLAGMGMTEK 207 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ T+ + G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 208 QGGSDVRTNTTAATPTGEPGVYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 267 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G N QRLK+K+GNRSNA+ E EF T +L+G + +M LD + S Sbjct: 268 GGRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMSS 327 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 + MR +L EA H+ R R G L+DQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 328 ATLMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 387 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + EAA+ RI + KYW K PA AEA+EC+GG+GY+EE + RHYRE+P SI Sbjct: 388 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 GSGN LDVL L + LF+ L G+ + + R L + + AR Sbjct: 448 EGSGNVNALDVLRALGRSPAAAHALFAELALARGADARLDTAVSRLESGLAEASETGARR 507 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534 L E++AL A+ L R +AD F +R Sbjct: 508 LVEQMALTLQASLLVRHAPPAVADAFCASRL 538 >gi|220921092|ref|YP_002496393.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219945698|gb|ACL56090.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 538 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 213/512 (41%), Positives = 295/512 (57%), Gaps = 7/512 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 LNQ P F+ +N ++D+ L AL AN L G S +L R+AN N P+ Sbjct: 7 LNQSPPFVDVNLVAADAALRGALGANGADPEDPALLAFGAAWGSAERLDLGRLANENPPR 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + P G R D VEFHPA+HAL+ SI +GLH S+WD P+ + H RAARL+++ Sbjct: 67 LRTHDPRGRRADIVEFHPAYHALMGASIAEGLHASVWDGPAPPLPAGRGHLARAARLHIV 126 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 A +E+GHL ++TSA++ AL +P W P+I +R YDP +K V +G+G+T Sbjct: 127 AGVESGHLCPMTMTSAAVAALAASPDHLAAWWPRITARRYDPRFLPWFEKAGVTLGMGMT 186 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ A +++ + Y L+GHKWF S+PM DAF++LAQ + CFLVPR Sbjct: 187 EKQGGTDVRANSTRAEPTGADTYALTGHKWFFSAPMCDAFLVLAQAPAGLACFLVPRHRP 246 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N L QRLK+K+GNRSNA+ E+EF FG+ +G+ + M L LD A+ Sbjct: 247 DGSVNALELQRLKDKLGNRSNASSEVEFDRAFGWRIGEEGRGIRTILAMVQLTRLDCAVA 306 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S R++LA A+H+A+ R V L DQP M+ +AD+AL + A TAL RLA SFD Sbjct: 307 SSGLARMALALALHHAQHRSVFQKRLADQPAMRGVLADLALAVEAQTALVMRLAASFDRG 366 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E A AR++ P KY CK APA++ EAMEC+GG+GY+EE + R YRE+P N+I Sbjct: 367 -----EGARARLLTPAVKYAVCKAAPALVYEAMECLGGNGYVEESPLPRLYREAPVNAIW 421 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL + L + L + G G + + + AR Sbjct: 422 EGSGNVMALDVLRAAARAPEEARSLLAELATEARGLPGAREAARDVAEALEAPDAEAQAR 481 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 F T ++A + AAAL + IA+ + E R Sbjct: 482 FATGRLAALAGAAALATSAPPAIAEAYAETRL 513 >gi|39936178|ref|NP_948454.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39650033|emb|CAE28556.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 561 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 191/468 (40%), Positives = 274/468 (58%), Gaps = 4/468 (0%) Query: 10 LAMNQVHQPSDSLF-ALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLS 67 LA + QPS + NQ P ++ +D LL A+ N + H ELE G+ Sbjct: 8 LAGTAMTQPSFATHEVFNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGI 67 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 E R+AN TP+L + G R D+VEFHP++H L+ S GLH S WD +P Sbjct: 68 TEMAERGRLANEYTPKLKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPA 127 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187 + +RAA+ Y+ AQ+E GHL ++T AS+ AL + P + P + +R+YDP+ Sbjct: 128 -GNASEVVRAAKFYMAAQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSF 186 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 K ++IG+G+TEK+GGTD+ ++ + D Y + GHKWF+S+PM DAF++LA Sbjct: 187 APWTAKRGMSIGMGMTEKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLA 245 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 Q + + CF +PR DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+L Sbjct: 246 QADEGLSCFFMPRFQPDGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIR 305 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + M L D AI S MR SLA A+H+ R R V L D +M +AD+AL + Sbjct: 306 TIIQMVQLTRQDCAIASAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVE 365 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ AL RL +FDEA + EAAY R++ P KYW CK AP + EAMEC+GG+GY+E+ Sbjct: 366 ASVALVMRLCRAFDEAPNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVED 425 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 +ARHYRE+P N+I GSGN M LDVL + + ++ ++ L QD Sbjct: 426 GILARHYREAPVNAIWEGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 473 >gi|239983095|ref|ZP_04705619.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 544 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 203/521 (38%), Positives = 290/521 (55%), Gaps = 26/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + Y++D L L A EL LG S AQE +AN N Sbjct: 10 NQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEWGVLANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +P LH + G R D+V FHPAW LL ++ GL+ + W R H RAA Sbjct: 70 SPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA-WSR-------PGGHLRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL P + W P + SR YDP + +K V G+ Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEKAGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDGLSCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L+DG+ N QRLK+K+GNRSNA+ E+EF T+ +GD + DM LD Sbjct: 242 RVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++A+A H+A R GG+L D+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 302 CVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTLALRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D+ E A+ RI P+ KYW K AV AEA+EC+GG+GY+EE + R RESP Sbjct: 362 YDDGS--EAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPRLLRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493 NS+ GSGN LDVL + + S + + L + K+++T L D + Sbjct: 420 NSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTELADLDGI 479 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 480 ----EARARRLVERMALILQGSLLLRFAPPEVADAFCASRL 516 >gi|291454927|ref|ZP_06594317.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291357876|gb|EFE84778.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 557 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 203/521 (38%), Positives = 290/521 (55%), Gaps = 26/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + Y++D L L A EL LG S AQE +AN N Sbjct: 23 NQPPPLVGYDVYTADHALTEGVERHLDAALLDEARVELSELGRAAGSAQAQEWGVLANEN 82 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +P LH + G R D+V FHPAW LL ++ GL+ + W R H RAA Sbjct: 83 SPVLHTHDRYGHRVDEVAFHPAWDRLLGHAVSAGLNTA-WSR-------PGGHLRRAAGF 134 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL P + W P + SR YDP + +K V G+ Sbjct: 135 LVWTQAEAGHGCPLSMTHAAVPALRRDPELAAFWEPLLTSRTYDPGLRPAAEKAGVLFGM 194 Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T++ + +++ G Y L+GHKWF S+PMSDAF++LAQ + CFLVP Sbjct: 195 GMTEKQGGSDVRANTTRAEPLAEAGTYLLTGHKWFCSAPMSDAFLVLAQAPDGLSCFLVP 254 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L+DG+ N QRLK+K+GNRSNA+ E+EF T+ +GD + DM LD Sbjct: 255 RVLQDGTRNPFALQRLKDKLGNRSNASGEVEFDGTWARRIGDEGRGVRTIIDMVAATRLD 314 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++A+A H+A R GG+L D+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 315 CVLGSAATMRQAVAQATHHAAHRSAFGGLLADKPLMRNVLADLALESEAATTLALRLAAA 374 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D+ E A+ RI P+ KYW K AV AEA+EC+GG+GY+EE + R RESP Sbjct: 375 YDDGS--EAEQAFLRIAVPVAKYWVTKRCTAVAAEALECLGGNGYVEESGMPRLLRESPL 432 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493 NS+ GSGN LDVL + + S + + L + K+++T L D + Sbjct: 433 NSLWEGSGNVQALDVLRAIGREPAALNAFLSEVGLARGADHRLDGAIKQLLTELADLDGI 492 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 493 ----EARARRLVERMALILQGSLLLRFAPPEVADAFCASRL 529 >gi|257057805|ref|YP_003135637.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256587677|gb|ACU98810.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 548 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 192/512 (37%), Positives = 284/512 (55%), Gaps = 8/512 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P + + +LL +L ++ LG S AQE R+AN N P LH Sbjct: 9 NQVPPLVDYDVADDPALLESLRREGADWAEPKVRELGVLAGSEQAQEWGRLANENPPVLH 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP WH L+ ++ GLH + W + R AH RAA+ Y+ +Q Sbjct: 69 THDRVGRRIDEVEFHPYWHQLMATAVSHGLHAAPWRQD-----RPGAHVARAAKFYVWSQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +EAGH S+T +++ AL + KD+ P + + YD + P K + G+ +TEK Sbjct: 124 VEAGHTCPISMTYSAVPALRYNAELAKDYEPLLAAPHYDFGLRVPTTKRGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ T++ DG Y L+GHKWF S+PMSD F+ LAQ G + CFL+PR+L DG Sbjct: 184 QGGSDVRTNTTRAVPTEDGTYRLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLLPRVLPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + +QRLK+K+GNRSNA+ E+E+ G+L+G+ + +M LD I S Sbjct: 244 TRNAIHFQRLKDKLGNRSNASAEVEYDGAVGWLIGEEGRGVRTIIEMVNNTRLDCVIGSA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384 + MR A+H+A R G L+ QP+M +AD+A++ AAT ++ RLA + D A Sbjct: 304 AAMRYGTVRAVHHATHRAAFGAPLVRQPLMTNVLADLAVEAEAATMVALRLAGATDRAVA 363 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +EAA+ R ++KYW CK +PA AEA+EC+GG+GY+EE + R +RESP SI Sbjct: 364 GDHQEAAFRRFALSVSKYWVCKRSPAHAAEALECLGGNGYVEESGMPRLFRESPLLSIWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + K + + +E G+ + + IT +R + E + AR Sbjct: 424 GSGNVTALDTLRAMAKQPESVDAFLAEVESARGADPRLDEAITSVRRDLGDPDEIEFRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L E++AL + L R G +AD F +R Sbjct: 484 RLVERLALVLQGSLLVRHGDKSVADAFCASRL 515 >gi|90423755|ref|YP_532125.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90105769|gb|ABD87806.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 549 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 192/448 (42%), Positives = 269/448 (60%), Gaps = 3/448 (0%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P F ++ ++ D L A+ A + EL G S E R+AN NTP+L Sbjct: 13 NQSPPFEDVDLFALDRPLADAVAAYGGASAAAELSEFGREWGSAEMAERGRLANENTPKL 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D+VEFHPA+H ++ S+ GLH S WD +P A IRAA+ Y+ A Sbjct: 73 KSFDARGLRRDEVEFHPAYHEVMAASMRAGLHNSTWDAQGKPA-GGAAEVIRAAKFYMAA 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +E+GHL ++T A++ AL P + + P I +R YD + K QK + +G+G+TE Sbjct: 132 PVESGHLCPITMTRAAVGALSAQPDLLQQLMPVIATRSYDASFKPWQQKRGMTLGMGMTE 191 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ + +++ + D Y L GHKWF+S+PMSDAF++LAQ EG + CF PR D Sbjct: 192 KQGGTDVRSNSTRAVRDGDA-YRLIGHKWFMSAPMSDAFLVLAQAEGGLTCFFTPRFAPD 250 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N L +QRLK+K+GNRSNA+ E+EF+ + +G + +M L D AI S Sbjct: 251 GSVNALQFQRLKDKLGNRSNASSEVEFTGAYAQRVGGEGRGIRTIIEMVQLTRQDCAISS 310 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V MR LA+A+H+AR R V L DQP+M+ +AD+AL + A+ AL RL +FD A Sbjct: 311 VGFMRAGLAQALHHARHRSVFQKRLADQPLMQAVLADMALQVEASVALVMRLCAAFDRAG 370 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 S AA+ R++ P KYW CK AP + EAMEC+GG+GY+EE +AR YRE+P N+I Sbjct: 371 SDEVAAAWMRLLTPAVKYWICKSAPPFLYEAMECLGGNGYVEEGVLARLYREAPVNAIWE 430 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 GSGN M LDVL L + +L + L Sbjct: 431 GSGNVMCLDVLRALSREPDLAAAVLQNL 458 >gi|297203226|ref|ZP_06920623.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197711310|gb|EDY55344.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 544 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 203/543 (37%), Positives = 295/543 (54%), Gaps = 26/543 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMANYN 80 NQPP G + Y +D L + P++ VH EL LG S QE AN N Sbjct: 10 NQPPPLTGYDVYGADRALKEAVERHLDPALLDEVHGELAALGRACGSAQVQEWGLQANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH +L + + GL + W RS H +RAA Sbjct: 70 PPRLRTHDRYGHRVDEVEFHPAWHRVLGKGVSAGL-TAAWARS-------GGHVLRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L Q++AG S+T A++ AL T P + +W P++ S YD + K G+ Sbjct: 122 VLWTQVDAGSCCPLSMTHAAVPALRTDPDLAAEWEPRLTSMVYDRELRPAHLKAGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + + DG Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTSARPLPDGETYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+LEDG+ N QRLK+K+GNRSNA+ E+EF T+ +GD + +M LD Sbjct: 242 RVLEDGTRNTFLLQRLKDKLGNRSNASAEVEFDRTWARRVGDEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S MR ++A+A+H+ R GG L+D+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLALESEAATTLALRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D +E A RI P KYW K + AEA EC+GG+GY+EE + R RESP Sbjct: 362 YD--NDDEQERALLRIAVPTAKYWITKRCTPLTAEAAECLGGNGYVEESGMPRLVRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493 NS+ G+GN LDVL +L++ + + L ++ K + T L D + Sbjct: 420 NSVWEGAGNIQALDVLRVLQREPQALNAYLLEIGRTRGADHRLDAATKSLFTELADLEGI 479 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553 +G AR LTE++AL + L R ++AD F +R + ++ L + A Sbjct: 480 ----EGRARHLTERLALVLQGSLLVRHAPAEVADAFCASRLGGDGGASFGTLPTTLDLAS 535 Query: 554 IID 556 ++D Sbjct: 536 VVD 538 >gi|192291895|ref|YP_001992500.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192285644|gb|ACF02025.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 549 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 186/452 (41%), Positives = 267/452 (59%), Gaps = 3/452 (0%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P ++ +D LL A+ N + H ELE G+ E R+AN TP+ Sbjct: 12 FNQSPPLPDIDLLGADRPLLEAITFNQGANAHVELEAFGKAWGITEMAERGRLANEYTPK 71 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHP++H L+ S GLH S WD +P + +RAA+ Y+ Sbjct: 72 LKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPA-GNASEVVRAAKFYMA 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL + P + P + +R+YDP+ K ++IG+G+T Sbjct: 131 AQVETGHLCPVTMTRASVAALGSQPDLLAQVMPVLGTRQYDPSFAPWTAKRGMSIGMGMT 190 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ ++ + D Y + GHKWF+S+PM DAF++LAQ + + CF +PR Sbjct: 191 EKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEGLSCFFMPRFQP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+L + M L D AI Sbjct: 250 DGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGELGRGIRTIIQMVQLTRQDCAIA 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR SLA A+H+ R R V L D +M +AD+AL + A+ AL RL +FDEA Sbjct: 310 SAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVALVMRLCRAFDEA 369 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + EAAY R++ P KYW CK AP + EAMEC+GG+GY+E+ +ARHYRE+P N+I Sbjct: 370 PNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILARHYREAPVNAIW 429 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 GSGN M LDVL + + ++ ++ L QD Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 461 >gi|296270222|ref|YP_003652854.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296093009|gb|ADG88961.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 534 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 192/513 (37%), Positives = 287/513 (55%), Gaps = 12/513 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P +G + + +LL L +E+ LG + AQE R+AN P L Sbjct: 6 FNQVPPLVGHDVAADAALLEGLAREGAGWAAEEIHRLGVLAGTAEAQEWGRLANEYPPVL 65 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPAWH L+ ++ +GLH + W R AH RAA+ ++ + Sbjct: 66 RTHDRYGHRIDEVEFHPAWHQLMTVAVENGLHAAPWASD-----RPGAHVARAAKFFIWS 120 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH S+T +++ AL +P + +W P++ S YD + P +K + G+ +TE Sbjct: 121 QVEAGHGCPISMTYSAVAALRHSPELRAEWEPRLTSCAYDFGLRPPAEKRGILAGMAMTE 180 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + T++ + + DG Y L+GHKWF S+PM D F +LAQ G + CFL+PR+L D Sbjct: 181 KQGGSDVRSNTTKAEPLGDGTYALTGHKWFNSAPMCDIFFVLAQAPGGLSCFLLPRVLPD 240 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + RLK+K+GNRSNA+ E+E+ +L+G+ + +M + LD I S Sbjct: 241 GTRNAMRLIRLKDKLGNRSNASAEVEYEGAIAYLVGEEGRGVRTIIEMVNMTRLDCVIGS 300 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +GMR L +A+H+A+ R V G +LIDQP+M+ +AD+AL+ AAT L RLA + D A Sbjct: 301 AAGMRFGLTQALHHAKHRRVFGKLLIDQPLMRAVLADLALESEAATTLMLRLAGATDRAI 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + EA + R KYW K P AEA+EC+GG+GY+E+ + R RESP NS+ Sbjct: 361 RGDEAEALFRRAALAAAKYWVTKRGPVHAAEALECLGGNGYVEDSQMPRLLRESPVNSVW 420 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS--LCKEDKGLA 501 GSGN LDVL +L + E F+ ++ +G IT D + L + A Sbjct: 421 EGSGNVAALDVLRVLARQPEAVEAFFA----EVALAGDARITKAADRLRALLASATEADA 476 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E++ L A+ L R +AD F R Sbjct: 477 RRIAEEMTLLLQASLLVRHAPAAVADAFCATRL 509 >gi|316932058|ref|YP_004107040.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315599772|gb|ADU42307.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 555 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 204/539 (37%), Positives = 296/539 (54%), Gaps = 13/539 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +NQP N +S+D LV +A ++ G + + EL +AN + P+ Sbjct: 18 INQPVELADYNLFSADRPLVEAVAREGAEWAANDIADFGARIGTADYLELGALANRHLPE 77 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + G R D V FHPA+H L++ SI GLH S W +P RK AH RAAR YL Sbjct: 78 FDTHDRYGRRTDLVRFHPAYHRLMQTSIEQGLHSSPWT---DP--RKGAHVARAARFYLH 132 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EAGH S+T A++ + P V K W PKI +R YD N K V IG+ +T Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKQWLPKILARSYDARNVPADHKQGVTIGMAMT 192 Query: 204 EKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T++ G G Y L GHK+F+S+PM DAF++LAQ G + CFLVP Sbjct: 193 EKQGGSDVRANTTRAILVGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N L RLK K+GN SNA+ E E G+++G + +M + D Sbjct: 253 RWKPDGSKNPLQVLRLKKKMGNASNASSETELRGALGWMIGPEGRGVATIIEMVAMTRFD 312 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR +L++AI + R+R G +LIDQP+M+ +AD+A++ AA L+ R+A + Sbjct: 313 CMIGSSAIMRAALSQAIDHCRQRAAFGRLLIDQPIMQNVLADLAIETEAALGLTMRIARA 372 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D ++ EA RI + I KYW CK P + AEAMECIGGSG +E+ + RH+RESP Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRHFRESPV 431 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497 N+I GSGN LDVL + + E F+ +EQ G+ + + I L+D + + Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRTPETLEAYFAEVEQAKGADVAFDRHIAALKDDMRDASDF 491 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR L +++A+ A+ L R +++ + + +R + L N A IID Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVTEAYCASRLAQRGAHHYGALPKGMNFAAIID 550 >gi|239946073|ref|ZP_04698010.1| putative oxidoreductase [Streptomyces roseosporus NRRL 15998] gi|239992544|ref|ZP_04713208.1| putative oxidoreductase [Streptomyces roseosporus NRRL 11379] gi|291449522|ref|ZP_06588912.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291352469|gb|EFE79373.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 552 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 203/513 (39%), Positives = 288/513 (56%), Gaps = 10/513 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G +A + D++L+ + + H EL G YV S AQ A AN + P+L Sbjct: 20 NQAPPLTGHDA-ADDAVLLEGVRREGAEWHIDELHRFGRYVGSEEAQHWADQANRHEPEL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPA+H+L+ S+ GL + W R AH RA L Sbjct: 79 RTHDRFGHRIDEVEFHPAYHSLMDASVRAGLAGAAWADE-----RPGAHVARAGGFMLAT 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 LE GHL S+T A + AL +P + K + P + SR Y+P P K + G+G+TE Sbjct: 134 MLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSTPAAKRGLLAGMGMTE 193 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ A T+ + +DG + L GHKWF S+PM+D F++LAQ G + CFLVPR+L D Sbjct: 194 KQGGTDVRANTTAAVEQADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFLVPRVLPD 253 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK K+GNRSNA+ E EF +T +L+GD + DM + LD + S Sbjct: 254 GSRNTFRIQRLKEKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 313 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +G+R +LA+A H+AR R V G LIDQP+M+ +AD++L+ AAT L+ RLA + D A Sbjct: 314 AAGIRTALAQAAHHARHRSVFGVELIDQPLMRNVLADLSLESEAATTLALRLAGAADRAH 373 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + E A+ R+ I KYW CK P +AEA+EC+GG+GY E + R YRE+P N I Sbjct: 374 RGDAGERAFLRLATAIGKYWVCKRQPVAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 433 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LD+L L + E L + + G+ + LR ++ ++ + A Sbjct: 434 EGSGNVNALDMLRALTREPESLEALSAEIGAAAGADARLDAAWRELRAELARPEDAQLRA 493 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E+ AL + L R +AD F +R Sbjct: 494 RRVVERAALVLQGSLLVRHAPAAVADAFCASRL 526 >gi|332142200|ref|YP_004427938.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Alteromonas macleodii str. 'Deep ecotype'] gi|327552222|gb|AEA98940.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Alteromonas macleodii str. 'Deep ecotype'] Length = 560 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 198/526 (37%), Positives = 289/526 (54%), Gaps = 17/526 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEY--VLSCTAQELARMANYNTP 82 NQP + N + D LL + P H ELLG + + E +AN N P Sbjct: 14 NQPSILNSYNLWRDDKLLKTYVTQQLPEKQHWIAELLGCFGALAGNELMEHGELANKNKP 73 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L + G R D V+FHP++HAL++ ++ +H W + AH +RA +Y+ Sbjct: 74 ELRTFDRYGRRIDHVDFHPSYHALMQSAMKHNVHNYSWQNE----QQDGAHTLRAVLMYM 129 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E+G ++T A++ A+ + W K+ + YDP + QK V IG+G+ Sbjct: 130 HYQAESGTSCPLTMTHAAVPAMRYGKSLPSYWLDKLINGVYDPRSLPASQKNGVTIGMGM 189 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ T+ K DG Y + GHK+F S+PM DA ++LAQ EG + CFL+PR+L Sbjct: 190 TEKQGGSDVRRNTTTATKQRDGSYSIVGHKFFFSAPMCDAHLILAQAEGGLSCFLLPRIL 249 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 E+G N + QRLK+K+G+ SNA+ E+EF +L+G+ + DM L LD I Sbjct: 250 ENGELNNVRIQRLKDKLGDWSNASSEVEFQEATAYLIGEEGRGVPVIIDMVSLTRLDCMI 309 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + MR SL A+H+ R G L++QP+M+ + D+ ++ AAATAL+ R+A + D Sbjct: 310 GSSALMRQSLVHALHHVSHRDAFGKTLVNQPLMQNVLTDLTIECAAATALTMRVAKAVDN 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A S EAA AR+ I KYW CK P + EA EC+GG GY+EE + R+YR++P NSI Sbjct: 370 ASRNSYEAALARLATAIGKYWICKRTPMFVNEAQECLGGIGYVEENPMPRYYRQAPLNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGL 500 GSGN LDVL L K N+ E LF+ L+ G + I + L D +S + + Sbjct: 430 WEGSGNVQCLDVLRALAKEPNVKEALFNELKTQTGKNKHYDIHLSKLLDELSNTQNMETR 489 Query: 501 ARFLTEKIALASSAAALYRAGM--------NDIADVFLENRFLDNC 538 +R+LTE++ALA A L NDIA F E+R + C Sbjct: 490 SRYLTEQMALALQACTLLATCTFLAKGNVHNDIAHTFCESRLGNAC 535 >gi|307328113|ref|ZP_07607293.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306886232|gb|EFN17238.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 548 Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 198/516 (38%), Positives = 289/516 (56%), Gaps = 11/516 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 LNQ P +G + +LL AL + E+ LG S Q+ ARMA ++P L Sbjct: 8 LNQAPPLVGFSTADDPALLEALRRDGGGWGEPEVRDLGARAGSAEVQDWARMAEEHSPAL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+VE+HPA+H L+ ++ G H + W + R AH +RAA+ Y A Sbjct: 68 HTHDRYGHRIDEVEYHPAYHQLMDVAVASGQHAAAWSET-----RPGAHLVRAAKFYAFA 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E GH S+T A++ AL P + + P + +R YD + P+ K + G+ +TE Sbjct: 123 QAEPGHGCPISMTYAAVPALRAEPELAAVYEPLLAARTYDFGLRPPLAKRGLIAGMSMTE 182 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+Q G Y L+GHKWF S+PMSD F+ LAQ E + CFLVPR+L D Sbjct: 183 KQGGSDVRANTTQAVPDGAGGYALTGHKWFTSAPMSDVFLTLAQTEEGLTCFLVPRVLPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N L RLKNK+GNRSNA+ E+E+ + + +G+ + +M + LD I S Sbjct: 243 GSRNPLRLMRLKNKLGNRSNASAEIEYESAMAWRVGEPGRGVRTIVEMVNVTRLDCVIGS 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +GMR L +A+H+A R G LIDQP+M+ +AD+A++ AAT L+ RLA + D A+ Sbjct: 303 AAGMRAGLRQALHHAGHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATALDRAE 362 Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E EAA R+ ++KYW CK AEA+EC+GG+GY+EE + R YRE+P SI Sbjct: 363 AGDEGEAALRRLGLAVSKYWVCKRGSTHAAEALECLGGNGYVEESGMPRLYREAPLLSIW 422 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI-SLCKEDKG- 499 GSGN LDVL L + + E + ++ G+ + + LR + L ++ Sbjct: 423 EGSGNIAALDVLRALSRESGALEAFLAEVDAAAGADARLDAAVDRLRGLLPQLADPERAQ 482 Query: 500 -LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +AR L E++ LA + L R +AD F +R Sbjct: 483 LMARRLAEQMTLALQGSLLVRYSHPAVADAFCASRL 518 >gi|134099627|ref|YP_001105288.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291005467|ref|ZP_06563440.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133912250|emb|CAM02363.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 547 Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 193/512 (37%), Positives = 289/512 (56%), Gaps = 8/512 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P + + +LL L + +EL LG S QE AR+A P L Sbjct: 9 NQVPPLVDHDVAGDPALLEGLRREGAAWAEEELHALGTLAGSARVQEWARLAEQYPPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHP WH L+ ++ +GLH + W + R AH RAA++Y+ Q Sbjct: 69 THDRYGHRVDEVDFHPHWHDLMDVAVTNGLHAAPWRQE-----RPGAHVARAAKMYVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 + GHL S+T A++ AL P + + + P + + YD + P K + G+ +TEK Sbjct: 124 TDPGHLCPISMTYAAVPALRAAPELAELYEPLLAAPVYDFGLREPAGKRGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ T++ DG Y L+GHKWF S+PMSD F+ LAQ G + CFL+PR+L DG Sbjct: 184 QGGSDVRVNTTRAVPAGDGTYTLTGHKWFTSAPMSDVFLTLAQAPGGLSCFLLPRVLPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + QRLK+K+GNRSNA+ E+E+ + G+L+G+ + M L LD A+ S Sbjct: 244 TRNAIRLQRLKDKLGNRSNASSEIEYEDARGWLVGEEGRGVATIIRMVNLTRLDCAVASA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +GMR + +A+H+A R G L+DQP+M +AD+A++ AAT RLA + D A + Sbjct: 304 AGMRQGVVQAVHHATHRRAFGDRLVDQPLMTNVLADLAVEAEAATVAGMRLAGAVDRAAA 363 Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + E ++ RI +TKYW CK APA AEA+EC+GG+GY+EE + R YRESP SI Sbjct: 364 GDDGEESFRRIGLAVTKYWVCKRAPAHAAEALECLGGNGYVEESGMPRLYRESPLASIWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + K + F+ +EQ G+ G+ + I +R + ++ + AR Sbjct: 424 GSGNVAALDALRAMAKQPESVQAYFTEVEQAAGADGRLDRAIASVRKELGDLEDAQYRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + E +A+ + L+R G +AD F +R Sbjct: 484 RVVELMAVVLQGSLLHRHGNPAVADAFCASRL 515 >gi|297155151|gb|ADI04863.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 548 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 194/516 (37%), Positives = 290/516 (56%), Gaps = 11/516 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 LNQ P IG + +LL AL + S +E+ LG S Q+ ARMA + P L Sbjct: 8 LNQAPPLIGFSTADDPALLEALRRDGGSRGEQEVRELGALAGSAEVQDWARMAEEHPPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+VE+HPA+H L+ ++ G H + W + R AH +RAA+ Y A Sbjct: 68 HTHDRYGHRVDEVEYHPAYHQLMAAAVASGQHAAAWSET-----RPGAHLVRAAKFYCFA 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E GH S+T A++ AL P + + P + +R YD + P+ K + G+ +TE Sbjct: 123 QAEPGHGCPISMTYAAIPALRAEPELAAAYEPLLAARVYDFGLRPPLGKRGLIAGMSMTE 182 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ +DG Y L+GHKWF S+PMSD F+ LAQ + + CFLVPR+L D Sbjct: 183 KQGGSDVRANTTRALPQADGSYLLTGHKWFTSAPMSDIFLTLAQTDEGLTCFLVPRVLPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLKNK+GNRSNA+ E+E+ + +G+ + +M + LD I S Sbjct: 243 GTLNAMRLQRLKNKLGNRSNASSEIEYDGAVAWRVGEPGRGVRTIVEMVNVTRLDCVIGS 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +GMR L +A+H+ R G LIDQP+M+ +AD+A++ AAT L+ RLA + D + Sbjct: 303 AAGMRAGLRQALHHTEHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATALDRTQ 362 Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E EAA R+ ++KYW CK AEA+EC+GG+GY+E+ + R YRE+P SI Sbjct: 363 AGDESEAALRRLGLAVSKYWVCKRGATHAAEALECLGGNGYVEDSGMPRLYREAPLLSIW 422 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRD---SISLCKEDK 498 GSGN LDVL L + + + + ++ G+ + + LRD ++ + + Sbjct: 423 EGSGNVAALDVLRALGRESGALDAFLAEVDTAAGADARLDAAVARLRDLLPQLADPQRAQ 482 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 LAR L E++ L + L R +AD F +R Sbjct: 483 LLARRLAEQMTLVLQGSLLVRYSHPAVADAFCASRL 518 >gi|39933666|ref|NP_945942.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39647512|emb|CAE26033.1| possible acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 555 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 204/539 (37%), Positives = 301/539 (55%), Gaps = 13/539 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +NQP N +S+D LV A+ ++ G + + EL +AN + P+ Sbjct: 18 INQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALANRHLPE 77 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + G R D V FHPA+H L++ SI +GLH S W +P RK AH RAAR YL Sbjct: 78 FDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWT---DP--RKGAHVARAARFYLH 132 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EAGH S+T A++ + P V K W PK+ +R YD N QK + IG+ +T Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGITIGMAMT 192 Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T++ I G Y L GHK+F+S+PM DAF++LAQ G + CFLVP Sbjct: 193 EKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N L RLK K+GN SNA+ E E FG+++G + +M + D Sbjct: 253 RWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMVAMTRFD 312 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR +L++AI + R+R G +LI+QP+M+ +AD+AL+ AA AL+ R+A + Sbjct: 313 CMIGSSAIMRAALSQAIDHCRQRAAFGRLLIEQPIMQNVLADLALETEAALALTMRIARA 372 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D ++ EA RI + I KYW CK P + AEAMECIGGSG +E+ + RH+RESP Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPGLTAEAMECIGGSGVMEDGPMPRHFRESPV 431 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497 N+I GSGN LDVL + + + F+ +EQ G+ + + I L+D + + Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDMRDPSDF 491 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR L +++A+ A+ L R +++A+ + +R + L N A IID Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNFAAIID 550 >gi|316933652|ref|YP_004108634.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315601366|gb|ADU43901.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 549 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 184/452 (40%), Positives = 266/452 (58%), Gaps = 3/452 (0%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P ++ + +D LL A+ N + H ELE G+ + E R+AN TP+ Sbjct: 12 FNQSPPLPDLDLFGADRPLLEAVTFNQGANAHVELEAFGKAWGTTEMAERGRLANEYTPK 71 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHP++H L+ S GLH S WD +P + +RAA+ Y+ Sbjct: 72 LKTFDAKGVRRDQVEFHPSYHELMAESFKAGLHNSTWDAHGKPAGHA-SEVVRAAKFYMA 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E GHL ++T AS+ AL P + P + +R+YD + K ++IG+G+T Sbjct: 131 AQVETGHLCPVTMTRASVAALGAQPDLLAQVMPVLGTRQYDQSFAPWTAKRGMSIGMGMT 190 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GGTD+ ++ + D Y + GHKWF+S+PM DAF++LAQ + + CF +PR Sbjct: 191 EKQGGTDVRTNATRAFRDGDA-YRIVGHKWFMSAPMCDAFLVLAQADEGLSCFFMPRFAP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N + +QRLK+K+GNRSNA+ E+EF+ + +G+ + M L D AI Sbjct: 250 DGSVNEIRFQRLKDKLGNRSNASSEVEFTGAYALPVGEPGRGVRTIIQMVQLTRQDCAIA 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S MR SLA A+H+ R R V L D +M +AD+AL + A+ AL RL +FDEA Sbjct: 310 SAGLMRSSLAHALHHTRHRTVFQKRLADHSLMVSVLADMALQVEASVALVMRLCRAFDEA 369 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + EAAY R++ P KYW CK AP + EAMEC+GG+GY+E+ +ARHYRE+P N+I Sbjct: 370 PNDPLEAAYMRLLTPAVKYWICKSAPPFVYEAMECLGGNGYVEDGILARHYREAPVNAIW 429 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 GSGN M LDVL + + ++ ++ L QD Sbjct: 430 EGSGNVMCLDVLRAMSRESDAGTEVLQALIQD 461 >gi|111220250|ref|YP_711044.1| acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111147782|emb|CAJ59442.1| acyl-CoA dehydrogenase (flavoprotein) , adaptive response (transcription activated by Ada) [Frankia alni ACN14a] Length = 580 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 201/536 (37%), Positives = 295/536 (55%), Gaps = 8/536 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +G +A + +LL AL+ L LG + A+ A A+ P+L Sbjct: 26 NQPPPLVGHDASADPALLTALVREGAGWHTDALRRLGRLAGTEQARRWAEEADRFPPELR 85 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHP+WHALL ++ +GL + W +P R AH RAA + + Sbjct: 86 THDRYGNRVDEVDFHPSWHALLEVAVREGLTGAPW---RDP--RPGAHVARAANILVWGT 140 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GHL S+T A + AL P + + P + SR YDP + P K + G+G+TEK Sbjct: 141 VEQGHLCPVSMTYAVVPALRAAPDLAARYEPLLASRIYDPGLRPPEGKAGLLAGMGMTEK 200 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+ +DG Y L GHKWF S+PM+D F++LAQ G + CF VPR+L DG Sbjct: 201 QGGSDVRANTTTATPAADGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFWVPRVLPDG 260 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N QRLK+K+GNRSNA+ E EF +T +L+G + +M + LD+++ S Sbjct: 261 SRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGAEGRGVRVIIEMVAMTRLDASLGSA 320 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384 +GMR ++ A H+ R R G LID P+M+ +AD+AL+ AAT L R+A + D A+ Sbjct: 321 AGMRAAVTAAAHHVRHRRAFGTRLIDAPLMRNVLADLALESEAATTLVLRVAGAVDRAAR 380 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +E A+ R+ + KYW CK AP V AEA+EC+GG+GY+EE + R YRE+P N I Sbjct: 381 GDRDEQAFKRLATAVAKYWVCKRAPGVAAEALECLGGNGYVEESGMPRLYREAPLNGIWE 440 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LDVL L++ + + L +E G+ + + LR + D AR Sbjct: 441 GSGNVNALDVLRALDREPDGLDALSRQIEAARGADARLDRAWDRLRAQLPKAAADPFAAR 500 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 + E++AL + L R +AD F +R + L + A I+D + Sbjct: 501 RVVERLALVMQGSLLVRHAPPAVADAFCASRLAGDGGLAFGTLPSGVDVAGILDRI 556 >gi|75676196|ref|YP_318617.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gi|74421066|gb|ABA05265.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 546 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 187/461 (40%), Positives = 267/461 (57%), Gaps = 5/461 (1%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75 QP + LNQ P F ++ ++ D L +A ++ ++ G++ S R Sbjct: 3 QPFRTHEVLNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDDMKAFGKHWGSSAMAARGR 62 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 +AN N P+ + G R D+VEFHP++H L+ S H GLH S W P A + Sbjct: 63 LANENPPKPRLFDARGNRRDEVEFHPSYHELMAHSAHAGLHNSTWTADGRPAA-GAAEVV 121 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 RAA+ Y+ AQ+E GHL ++T AS+ L P + + P I +R YDP K Sbjct: 122 RAAKFYMAAQVETGHLCPITMTRASVATLAAQPDLLAETMPVIATRSYDPLFAPWRTKRG 181 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+G+TEK+GGTD+ A +Q + + DG Y ++GHKWF+S+PM DAF++LAQ EG + Sbjct: 182 MTLGMGMTEKQGGTDVRA--NQTRAVRDGDAYRVTGHKWFMSAPMCDAFLVLAQAEGGLT 239 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF +PR DGS N + QRLK+K+GNRSNA+ E+EF + +G+ + M Sbjct: 240 CFFMPRFRPDGSVNAIHLQRLKDKLGNRSNASAEVEFIEAYARRVGEEGKGIRAILQMVQ 299 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L D AI S MR LA A+H+AR R V L+DQP+M+ +AD+AL + A+ AL Sbjct: 300 LTRQDCAIASAGLMRSGLAHALHHARHRSVFRKRLVDQPLMQAVLADMALQVEASVALVM 359 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL +FDEA S + A + R++ P KYW CK AP + EAMEC+GG+GY+EE +ARHY Sbjct: 360 RLCRAFDEAPSDQKAAVWMRLLTPAVKYWICKSAPGFLYEAMECLGGNGYVEEGILARHY 419 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 RE+P N+I GSGN + LDVL L + + + L D Sbjct: 420 REAPVNAIWEGSGNVICLDVLRSLARDGDAAVAVLDDLAAD 460 >gi|192289022|ref|YP_001989627.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192282771|gb|ACE99151.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 555 Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 202/539 (37%), Positives = 302/539 (56%), Gaps = 13/539 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +NQP N +S+D LV A+ ++ G + + EL +AN + P+ Sbjct: 18 INQPVELADYNLFSADRPLVEAVTREGAEWAANDIADFGARIGTAEYLELGALANRHLPE 77 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + G R D V FHPA+H L++ SI +GLH S W +P RK AH RAAR YL Sbjct: 78 FDTHDRYGRRTDLVRFHPAYHRLMQTSIENGLHSSPWT---DP--RKGAHVARAARFYLH 132 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EAGH S+T A++ + P V K W PK+ +R YD N QK + IG+ +T Sbjct: 133 SQIEAGHGCPISMTFAAVPCISLQPDVAKVWLPKVLARSYDARNVPAEQKQGITIGMAMT 192 Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T++ I G Y L GHK+F+S+PM DAF++LAQ G + CFLVP Sbjct: 193 EKQGGSDVRANTTRAIPIGAGGPGGEYELVGHKFFVSAPMCDAFLVLAQAPGGLSCFLVP 252 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N L RLK K+GN SNA+ E E FG+++G + +M + D Sbjct: 253 RWKPDGAKNPLQVLRLKKKMGNASNASSETELRGAFGWMIGPEGRGVATIIEMVAMTRFD 312 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR +L++A+ + R+R G +LI+QP+M+ +AD+A++ AA AL+ R+A + Sbjct: 313 CMIGSSAIMRAALSQAMDHCRQRAAFGRLLIEQPIMQNVLADLAIETEAALALTMRIARA 372 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D ++ EA RI + I KYW CK P++ AEAMECIGGSG +E+ + RH+RESP Sbjct: 373 LDH-RTDEHEAHLIRIGSAIGKYWICKRTPSLTAEAMECIGGSGVMEDGPMPRHFRESPV 431 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS--SGKKVITILRDSISLCKED 497 N+I GSGN LDVL + + + F+ +EQ G+ + + I L+D + + Sbjct: 432 NAIWEGSGNVQCLDVLRAMTRAPETLQAYFAEVEQAKGADVAFDRHIAALKDDMRDASDF 491 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR L +++A+ A+ L R +++A+ + +R + L N A IID Sbjct: 492 EERARDLVDRLAVGLQASVLIRHAPDEVAEAYCASRLAQRGAHHYGALPKGVNFAAIID 550 >gi|298246748|ref|ZP_06970553.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297549407|gb|EFH83273.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 552 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 194/515 (37%), Positives = 282/515 (54%), Gaps = 11/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQPP + N ++ DS LVA I + +E L LG Y+ S AN P+L Sbjct: 16 NQPPPLVQYNPFTLDSALVAGIQREGAGWAEERLSELGRYLGSSEVITQGFEANTYPPEL 75 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+V FHPAWH L+ +++ G H W R A RAA YL Sbjct: 76 HTHDRYGHRIDEVSFHPAWHQLMGAAVNWGTHALSWRED-----RPGAQVARAAGFYLFT 130 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH S+T A++ L P + + W P + S EYD + +K + G+G+TE Sbjct: 131 QVEAGHGCPISMTHAAIPVLRHQPELAETWLPGLLSLEYDFGLRPATEKRGLLCGMGMTE 190 Query: 205 KRGGTDIAAITSQG---QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 K+GG+D+ A T++ ++ G Y L+GHKWF S+PM D F++LAQ G + CFL+PR+ Sbjct: 191 KQGGSDVRANTTRAVPAGELGAGTYLLTGHKWFCSAPMCDVFLVLAQAPGGLSCFLLPRV 250 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 L DG+ N QRLK+K+GNRSNA+ E EF T FL+G+ + +M LD Sbjct: 251 LPDGTRNSFFIQRLKDKLGNRSNASSEAEFQQTVAFLVGEEGQGVRTIIEMVNYTRLDCI 310 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + S + MR +L +A+H+ R R G L+DQ +M+ +AD++L++ AA L+ RLA + D Sbjct: 311 LGSTAMMRQALTQALHHTRHRQAFGRPLLDQSLMRNVLADLSLEVEAAITLALRLARACD 370 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 +A + + E R+ + KYW K P +AEA+EC+GG+GY+EE + R YRE P NS Sbjct: 371 QAPTSTHEEHIKRLGTALGKYWVTKRGPTCVAEALECLGGNGYVEESIMPRLYREMPLNS 430 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKG 499 I GSGN LDVL L K + E F+ + ++ + L+ +S + Sbjct: 431 IWEGSGNVNCLDVLRALAKQPQVLESFFTEVAPARAANKHLSDAVQALQQELSHLDNIEW 490 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ARFL E++AL A L + +AD F +R Sbjct: 491 RARFLVERMALILQGALLVQHAPAPLADAFCTSRL 525 >gi|302555001|ref|ZP_07307343.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302472619|gb|EFL35712.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 544 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 198/539 (36%), Positives = 297/539 (55%), Gaps = 18/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80 NQ P +G + +S+D L A + P ++ + EL LG S QE +AN N Sbjct: 10 NQVPPLVGYDVFSADRALTAAVERHLDPVLLDEALGELTGLGRASGSAQVQEWGALANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHP+WH LL + + GL + W+R H RAA Sbjct: 70 PPRLRTHDRYGNRIDEVEFHPSWHRLLGKGVAAGL-TAAWNRP-------GGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG+ S+T A++ AL T P + +W P++ S+ YD + QK G+ Sbjct: 122 LVWTQVEAGNGCPLSMTHAAVPALRTDPELAAEWEPRLTSQIYDRELRPAGQKAGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + +++ G Y L+GHKWF S+PMSD F++LAQ + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTSARPLAEAGTYELTGHKWFCSAPMSDGFLVLAQAPDGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+LEDG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 242 RVLEDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S MR ++A+A+H+ R GG L+D+P+M+ +AD+A++ AAT L+ RLA + Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTHREAFGGKLVDKPLMRNVLADLAIESEAATTLALRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +DE +E A RI P KYW K PAV EA EC+GG+GY+EE + R RESP Sbjct: 362 YDEGG--EQERALLRIAVPTAKYWVTKRCPAVAVEAAECLGGNGYVEESGLPRLVRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI G+GN LDVL L++ + + Q G+ + I L ++ + Sbjct: 420 NSIWEGAGNVQALDVLRALQREPGALDAYLREVGQARGADHRLDGAIKNLLTELADLEGV 479 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 +G AR L E++AL + L R ++AD F R + + L + A +++ Sbjct: 480 EGRARRLAERLALVLQGSLLVRFAPPEVADAFCAARLGGDGGAAFGTLPHTLDLASVVE 538 >gi|297197847|ref|ZP_06915244.1| oxidoreductase [Streptomyces sviceus ATCC 29083] gi|297146889|gb|EDY60541.2| oxidoreductase [Streptomyces sviceus ATCC 29083] Length = 551 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 201/513 (39%), Positives = 279/513 (54%), Gaps = 11/513 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +A LL L + L LG S AQE A AN + P L Sbjct: 17 NQPPPLAPYDASDDPVLLEGLRREGADWAEEGLRRLGLRAGSAEAQEWADQANRHEPVLR 76 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHP+WH L+R ++ +GL + W R AH R A + Sbjct: 77 THDRYGNRVDEVDFHPSWHHLMRTAVAEGLAGTPWAED-----RTGAHVARTAGGLVWGH 131 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A++ AL P + K + + REY+P + P +K + G+G+TEK Sbjct: 132 TDAGHGCPTSMTYAAIPALRKEPELAKVYESLLTGREYEPELRVPTRKRGLLAGMGMTEK 191 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ T+ ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 192 QGGSDVRTNTTTATPTAESGMYTLRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 251 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK+K+GNRSNA+ E EF T +L+G + +M LD +MS Sbjct: 252 GSRNTFRIQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 311 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 + MR +L EA H+AR R G LIDQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 312 ATLMRRTLVEAGHHARHRSAFGARLIDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 371 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + E A+ RI + KYW K PA AEA+EC+GG+GY+E+ + RHYRE+P SI Sbjct: 372 RGDAGEQAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIW 431 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LDVL L + + + LF L G+ + + LRD ++ E A Sbjct: 432 EGSGNVNALDVLRALRRDPDTAQALFGELALAQGADARLDAAVARLRDQLATASEAG--A 489 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R L E +AL A+ L R +AD F R Sbjct: 490 RRLVEYMALTLQASLLVRHAPPAVADAFCATRL 522 >gi|320007740|gb|ADW02590.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 562 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 197/539 (36%), Positives = 296/539 (54%), Gaps = 18/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80 NQ P +G + ++ D L + P ++ +EL LG S AQE AN N Sbjct: 27 NQVPPLVGYDVFAGDRALTEAVERHLAPGILREAQEELSTLGRAAGSAQAQEWGAQANEN 86 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+V+FHPAWH LL ++ GL W R + H RAA Sbjct: 87 PPKLRTHDRYGHRVDEVDFHPAWHRLLGHAVTAGL-TDAWGR-------EGGHVRRAAGF 138 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P + S Y+ + QK V G+ Sbjct: 139 LVWTQAEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHVYEEGLRPAPQKAGVLFGM 198 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GGTD+ + T++ + ++ DG Y L+GHKWF S+PMSD F++LAQ + CFLVP Sbjct: 199 GMTEKQGGTDVRSNTTRAEALAADGEYLLTGHKWFCSAPMSDGFLVLAQAADGLSCFLVP 258 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 259 RVLPDGARNPFALQRLKDKLGNRSNASGEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 318 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++A+AIH++ R GG+LI++P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 319 CVVGSAALMRQAVAQAIHHSAHRSAFGGLLIEKPLMRNVLADLALESEAATTLALRLAAA 378 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D +E A+ RI P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 379 YD--ADTEQERAFLRIAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAPL 436 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI GSGN LDVL L++ + + + G+ + I L ++ + Sbjct: 437 NSIWEGSGNVQALDVLRALQREPGALDAFLREVGKARGADHRLDAAIKDLLTELADLEAV 496 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR L E++AL + L R ++AD F +R + S L + A +++ Sbjct: 497 EARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGSAFGTLPHSLDLATVVE 555 >gi|239945204|ref|ZP_04697141.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239991666|ref|ZP_04712330.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] Length = 545 Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 198/517 (38%), Positives = 286/517 (55%), Gaps = 18/517 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80 NQ P +G + +++D +L + P V+ LE LGE S AQE AN + Sbjct: 10 NQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEWGTQANAH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 70 PPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P + S Y + P +K V G+ Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREKAGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ + T++ + +S G Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 182 GMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ L+G+ + +M LD Sbjct: 242 RVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++A+A+H++ R V GG LID+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 302 CVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVLAMRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D E A+ R+ P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 362 YD--ADTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPRLLREAPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI GSGN LDVL L++ + + G+ + I L ++ Sbjct: 420 NSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTELADLDGV 479 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +G AR L E+ AL + L R ++AD F +R Sbjct: 480 EGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRL 516 >gi|29828665|ref|NP_823299.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] gi|29605769|dbj|BAC69834.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] Length = 549 Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 200/544 (36%), Positives = 300/544 (55%), Gaps = 23/544 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80 NQ P +G + +++D LV + P+++ + EL LG S QE +AN N Sbjct: 10 NQAPPLVGYDVFAADRALVEAVERHLDPALLDEARTELSGLGLSAGSAQVQEWGALANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHP+WH LL + + GL + W R H RAA Sbjct: 70 PPKLRTHDRWGNRIDEVEFHPSWHRLLGKGVSAGL-TAAWSR-------PGGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAG+ S+T A++ AL T P + +W P++ S YD + QK G+ Sbjct: 122 VIWTQAEAGNGCPLSMTHAAVPALRTDPALAAEWEPRLTSMVYDQGMRPAAQKAGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVG 254 G+TEK+GG+D+ A T+ + ++ DG Y L+GHKWF S+PMSD F++LAQ G + Sbjct: 182 GMTEKQGGSDVRANTTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAASATDGGGLT 241 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVPR+LEDG+ N QRLK+K+GNRSNA+ E+EF T+ +GD + +M Sbjct: 242 CFLVPRVLEDGTRNVFRVQRLKDKLGNRSNASSEVEFDGTWARRVGDEGRGVRTIIEMVA 301 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 LD + S S MR ++A+AIH+ R GG L+D+P+M+ +AD+AL+ AAT L+ Sbjct: 302 ATRLDCVLGSASLMRQAVAQAIHHCTYREAFGGKLVDKPLMRNVLADLALESEAATTLAL 361 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RLA ++D+ +E A+ R+ P+ KYW K V AEA+EC+GG+GY+EE +AR Sbjct: 362 RLAAAYDDGG--EQERAFLRLAVPVAKYWVTKRCTPVAAEALECLGGNGYVEEFGLARLL 419 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492 RESP NSI G+GN LDVL L++ + + G+ + I L ++ Sbjct: 420 RESPLNSIWEGAGNVQALDVLRALQREPQALNAYLQEVGRARGADHRLDGAIKGLLTELA 479 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552 + +G AR + E++AL A L R ++AD F +R + + L + A Sbjct: 480 DLEGIEGRARRVVERLALVLQGALLVRYAPPEVADAFCASRLGGDWGTAFGTLPHSLDLA 539 Query: 553 HIID 556 +++ Sbjct: 540 TVVE 543 >gi|291448671|ref|ZP_06588061.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291351618|gb|EFE78522.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 558 Score = 342 bits (878), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 198/517 (38%), Positives = 286/517 (55%), Gaps = 18/517 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80 NQ P +G + +++D +L + P V+ LE LGE S AQE AN + Sbjct: 23 NQVPPLVGHDVFATDRVLSEAVERHVEPGVLPVALEELGELGRAAGSAQAQEWGTQANAH 82 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 83 PPVLRTHDRYGRRVDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 134 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P + S Y + P +K V G+ Sbjct: 135 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPLLTSHTYVEGLRNPREKAGVLFGM 194 Query: 201 GLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ + T++ + +S G Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 195 GMTEKQGGSDVRSNTTRAEPLSGGGAYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 254 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ L+G+ + +M LD Sbjct: 255 RVLPDGTRNVFLIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATRLD 314 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++A+A+H++ R V GG LID+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 315 CVVGSAALMRQAVAQAVHHSTYRSVFGGPLIDKPLMRNVLADLALESEAATVLAMRLAAA 374 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D E A+ R+ P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 375 YD--ADTEAERAFLRLALPAAKYWVTKRCAAVVGEALECLGGNGYVEESGMPRLLREAPL 432 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI GSGN LDVL L++ + + G+ + I L ++ Sbjct: 433 NSIWEGSGNVQALDVLRALQREPQALNAFLREVGKARGADHRLDAAIKGLLTELADLDGV 492 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +G AR L E+ AL + L R ++AD F +R Sbjct: 493 EGRARRLAERFALVLQGSLLVRWAPPEVADAFCASRL 529 >gi|85716407|ref|ZP_01047379.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] gi|85696764|gb|EAQ34650.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] Length = 546 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 182/446 (40%), Positives = 263/446 (58%), Gaps = 5/446 (1%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELAR 75 QP + NQ P F ++ ++ D L +A + E+E G++ S R Sbjct: 3 QPFRTHEVFNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDEMEAFGKHWGSTAMAARGR 62 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 +AN N P+L + G R D+VEFHPA+H L+ S LH S W +P A + Sbjct: 63 LANENPPKLRLFDARGNRRDEVEFHPAYHELMANSARASLHNSTWTADGKPAA-GAAEVV 121 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 RAA+ Y+ AQ+E GHL ++T AS+ L P + + P I + YDP+ K Sbjct: 122 RAAKFYMAAQVETGHLCPITMTRASVATLAVQPDLLAEAMPVIATCSYDPSFAPWRTKRG 181 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+G+TE++GGTD+ A +Q + + DG Y ++GHKWF+S+PM DAF++LAQ +G + Sbjct: 182 MTLGMGMTERQGGTDVRA--NQTRAVRDGDAYRITGHKWFMSAPMCDAFLVLAQADGGLT 239 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF +PR DGS N + QRLK+K+GNRSNA+ E++F + +G+ + M Sbjct: 240 CFFMPRFRPDGSVNTIHLQRLKDKLGNRSNASSEVQFIEAYARRVGEEGKGIRTIIQMVQ 299 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L D AI SV MR LA A+H+AR R V L+DQP+M+ +AD+AL + A+ AL Sbjct: 300 LTRQDCAIASVGLMRSGLAHALHHARHRSVFQKRLVDQPLMQAVLADMALHVDASLALVM 359 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL +FDEA S + A + R++ P KYW CK +P ++EAMEC+GG+GY+EE + RHY Sbjct: 360 RLCRAFDEASSDPKAATWMRLLTPAVKYWICKSSPGFLSEAMECLGGNGYVEENVLPRHY 419 Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460 RE+P N+I GSGN M LDVL L + Sbjct: 420 REAPVNAIWEGSGNVMCLDVLRALAR 445 >gi|295835819|ref|ZP_06822752.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|295825722|gb|EFG64429.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 550 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 288/521 (55%), Gaps = 21/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + + +D L + P+++ EL LG S A+E AN N Sbjct: 10 NQPPPLVGYDVFGADRALSEAVDRHLDPALLPGARTELSELGRAAGSAQAREWGAQANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL S W R H RAA Sbjct: 70 PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 Q EAGH S+T A++ AL P + W P + SR YD + K G+ Sbjct: 122 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAVWEPLLTSRVYDEGLRPAAAKAGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKI---SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G+TEK+GG+D+ A T++ + DG++ L+GHKWF S+PMSD F++L Q G + CFL Sbjct: 182 GMTEKQGGSDVRANTTRAVPLDGDGDGVFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFL 241 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR+L DG N QRLK+K+GNRSNA+ E+EF T+ L+G+ + +M Sbjct: 242 VPRVLADGERNVFAIQRLKDKLGNRSNASAEVEFDGTWARLVGEEGRGVRTIIEMVAATR 301 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD A+ S + MR ++A+AIH+AR R GG L+D+P+M +AD+AL+ AAT L+ RLA Sbjct: 302 LDCALGSAALMRQAVAQAIHHARHREAFGGRLVDKPLMSNVLADLALESEAATTLALRLA 361 Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D A++ E E A R+ P+ KYW K V+ EA+EC+GG+GY+EE + R RE Sbjct: 362 AACDAAEAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESGLPRLLRE 421 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 SP NS+ GSGN LDVL L++G + + L G+ ++ +RD + Sbjct: 422 SPLNSLWEGSGNVQALDVLRALQRGPGALDAFLAELGLARGAD-HRLDAAVRDLFQELAD 480 Query: 497 DKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +G+ AR L E++AL + L R ++AD F +R Sbjct: 481 LEGVEAGARRLVERMALVLQGSLLVRFAPPEVADAFCASRL 521 >gi|300786591|ref|YP_003766882.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299796105|gb|ADJ46480.1| putative acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 546 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 194/517 (37%), Positives = 280/517 (54%), Gaps = 14/517 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P + +LL L EL LG + AQE R+ N N P L Sbjct: 9 NQVPPLADHDVADDPALLAGLERAGAGWAAAELHELGRLAGTEQAQEWGRLVNENEPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP WH L+R + GLH + W +P R+ AH RAA+ Y+ Q Sbjct: 69 THDRYGNRIDEVEFHPHWHDLMRVATGHGLHGTPWQ---DP--REGAHAARAAKFYVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +EAGH S+T A++ AL P + + P + + EYD + P K + G+ +TEK Sbjct: 124 VEAGHSCPISMTYAAVPALRANPELAARYEPLLAATEYDFGLRDPATKRGLLAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKI------SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 +GG+D+ A T+ SDG Y L GHKWF S+PM D F+ LAQ + CFL+P Sbjct: 184 QGGSDVRANTTTATPSVSAVSRSDGSYTLVGHKWFTSAPMCDMFLTLAQAPNGLSCFLLP 243 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DGS NG+ QRLK+K+GNRSNA+ E+E+ + G+L+G+ + +M LD Sbjct: 244 RVLPDGSRNGILLQRLKDKLGNRSNASSEIEYDHAVGWLVGEEGRGVRTIIEMVNNTRLD 303 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S SGMR+ A+H+A R G L+DQP+M +AD+ L+ AAT ++ RLA + Sbjct: 304 CTLGSASGMRLGAVRAVHHATHRRAFGKALVDQPLMANVLADLVLESEAATTVAMRLAAA 363 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + ++E A+ R+ ++KYW CK AP AEA+EC GG+GY+EE + R YRE+P Sbjct: 364 GDR-RGDAQEQAFRRLGLAVSKYWVCKRAPVHAAEALECFGGNGYVEESGMPRLYREAPL 422 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 +SI GSGN LD L + + F+ +E+ G + + +R ++ Sbjct: 423 SSIWEGSGNVAALDALRAMGRQPESVAAFFAEVERAAGGDARLDDAVDRVRKELTDLDGI 482 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E +AL + L R G +AD F +RF Sbjct: 483 EYRARRLVEAMALVLQGSLLVRHGHPAVADAFCASRF 519 >gi|54026985|ref|YP_121227.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54018493|dbj|BAD59863.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 540 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 195/539 (36%), Positives = 281/539 (52%), Gaps = 7/539 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P + + + +LL L E+ LG AQE R+AN P L Sbjct: 7 FNQVPNIVPFDVSRNPALLEGLHREGAGWAEAEVRELGALAGGERAQEWGRLANEYPPVL 66 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+VEFHP WH L+ ++ GLH + W R AH RAA+ Y Sbjct: 67 HTHDRYGHRIDEVEFHPYWHELMTVAVGHGLHAAPWLDE-----RPGAHVARAAKFYTWG 121 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +AGH+ S+T A++ AL P + + P + SR YD + P K + G+ +TE Sbjct: 122 AADAGHMCPISMTYAAVPALRHNPELAAKYEPLLGSRVYDFGLREPTGKAGLIAGMSMTE 181 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+ DG Y + GHKWF S+PMSD F+ LAQ G + CFL+PR+L D Sbjct: 182 KQGGSDVRANTTTATPQPDGTYRIVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPRVLPD 241 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLK+K+GN+SNA+ E+E+ N G+L+G + +M + LD I S Sbjct: 242 GTRNPIRIQRLKDKLGNKSNASSEIEYENATGWLVGPEGHGVKTIIEMVNMTRLDCVIGS 301 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR + A+H+AR R G LIDQP M+ +AD+ ++ AAT + RLA + D A Sbjct: 302 ATNMRQATVHAVHHARHREAFGAKLIDQPAMRNVLADLVIESDAATTVMMRLAGATDRAA 361 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 EA RI +TKYW CK AP + AEA+EC+GG+GY EE + R YRESP SI Sbjct: 362 HDPAEANLRRIALAVTKYWVCKRAPMLTAEALECLGGNGYAEESGMPRLYRESPLMSIWE 421 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + + + F + + G + + I + ++ + + AR Sbjct: 422 GSGNVAALDALRAMGRQPDTVAAYFDEVNKSRGDNPRLDDAIDRVGKELADLSDIEYRAR 481 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYLD 561 + E +AL A L R G +AD F R D+ L + II+ +++ Sbjct: 482 RVVELMALVLQGAQLVRHGHRAVADAFCATRLGDDWGIAFGTLPTGVDTESIIERAFVE 540 >gi|297191205|ref|ZP_06908603.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|297150822|gb|EDY62427.2| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 549 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 200/544 (36%), Positives = 293/544 (53%), Gaps = 23/544 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + +++D L + A +EL LG S AQE A+ N Sbjct: 10 NQPPPLVGYDVFTADRALAEAVDRHVAAEAGDAAREELSGLGRAAGSAEAQEWGAQADGN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+V+FHPAWH LL R++ GL W R H RAA Sbjct: 70 PPRLRTHDRYGHRIDEVDFHPAWHRLLDRAVSAGL-VDAWGR-------PGGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAGH S+T AS+ AL T P + +W P++ S Y+ + QK V G+ Sbjct: 122 LVWTQVEAGHGCPVSMTHASVPALRTDPVLAAEWEPRLTSTVYEEGLRPASQKRGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-----EGRVG 254 G+TEK+GG+D+ T++ + ++ DG Y L+GHKWF S+PMSD F++ AQ EG + Sbjct: 182 GMTEKQGGSDVRTNTTRAEPLAQDGEYLLTGHKWFCSAPMSDGFLVSAQAAPATREGGLT 241 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVPR+LEDGS N QRLK+K+GNRSNA+ E+EF T+ +G+ + M Sbjct: 242 CFLVPRVLEDGSRNVFRIQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTITGMVA 301 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 LD + S + MR ++A+AIH+ R GG+LID+P+M+ +AD+AL+ AAT L Sbjct: 302 ATRLDCVLGSAALMRQAVAQAIHHTAYRSAFGGLLIDKPLMRNVLADLALESEAATTLGM 361 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RLA ++D +E A+ R+ P K+W K V+AEA EC+GG+GY+EE + R Sbjct: 362 RLAAAYD--ADTEQERAFLRLAVPAAKFWVAKRCTPVVAEASECLGGNGYVEESGMPRLL 419 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSIS 492 RESP NSI GSGN LDVL L++ + + + G+ + I L ++ Sbjct: 420 RESPLNSIWEGSGNVQALDVLRALQREPSALNAFLQEVGRARGADHRLDGAIKGLLTELA 479 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAA 552 + AR L E++AL + L R +++D F +R + S L + Sbjct: 480 DLDGIEARARRLVERMALVLQGSLLVRWAPPEVSDAFCASRLGGDGGSVFGTLPHTLDLT 539 Query: 553 HIID 556 I++ Sbjct: 540 SIVE 543 >gi|282864765|ref|ZP_06273819.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] gi|282560190|gb|EFB65738.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] Length = 543 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 196/539 (36%), Positives = 292/539 (54%), Gaps = 18/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80 NQ P +G + ++ D L + PS++ + ELE LG S AQ AN N Sbjct: 10 NQVPPLVGYDVFARDRALTEAVERHLEPSILPEARGELEALGLSAGSAQAQTWGAQANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 70 PPRLRTHDRYGHRLDEVEFHPAWHRLLGHAVSAGL-TDAWGR-------PGGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAGH S+T A++ AL T P + +W P + S Y+ + +K G+ Sbjct: 122 LVWTQVEAGHGCPLSMTHAAVPALRTDPALAAEWEPLLTSHIYEEGLRPARRKAGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GGTD+ + T++ + + DG Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 182 GMTEKQGGTDVRSNTTRAEPLGGDGEYLLTGHKWFCSAPMSDGFLVLAQAPGGLSCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 242 RVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR ++ +AIH++ R GG+L+D+P+M+ +AD+AL+ AAT L RLA + Sbjct: 302 CVVGSAALMRQAVTQAIHHSAHRSAFGGLLVDKPLMRNVLADLALESEAATTLGLRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D +E A+ RI P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 362 YD--ADTEQERAFLRIAVPTAKYWVTKRCTAVVGEALECLGGNGYVEESGMPRLLREAPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI GSGN LDVL L + + + + G+ + I L ++ Sbjct: 420 NSIWEGSGNVQALDVLRALRREPQALDAFLREVGRARGADHRLDAAIKDLLTELADLDAV 479 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR L E++AL + L R ++AD F +R + + L + A +++ Sbjct: 480 EARARRLVERMALVLQGSLLLRWAPPEVADAFCASRLGGDWGAAFGTLPHTLDLASVVE 538 >gi|197103313|ref|YP_002128691.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196480589|gb|ACG80116.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 550 Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 198/520 (38%), Positives = 290/520 (55%), Gaps = 22/520 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQPP G N +SSD+ L+ A+ +L GE + + + +AN + P+ Sbjct: 13 FNQPPPLEGYNLFSSDAALIEAVRREGADWALDDLTAYGEQLGTAETLQHGALANRDPPR 72 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LHA+ G R D VE HPA+HAL+ + G+H S W EP + AH RAA LY+ Sbjct: 73 LHAFDRFGRRIDWVEHHPAYHALMGMQVAQGIHASPWS---EP--KPGAHVHRAAGLYMS 127 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q+EAG S+T A+ L + PK++SR YDP ++ +K+ IG+G+T Sbjct: 128 GQVEAGTSCPISMTYAAAPVLAQAGASVRALLPKLYSRRYDPAHRPVAEKSGALIGMGMT 187 Query: 204 EKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T++ ++ G Y + GHKWF+S+PM DAF++LAQ G + CF VP Sbjct: 188 EKQGGSDVRANTTRAAPLASGAPGEAYRIVGHKWFMSAPMCDAFLILAQAPGGLSCFFVP 247 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG N L +QRLK+K+GNRSNA+ E+EF G+L+GD + +M LD Sbjct: 248 RWTPDGDLNALRFQRLKDKLGNRSNASAEVEFEGALGWLVGDEGRGVATILEMVGYTRLD 307 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + S R +LA+A+H+AR R L+DQP+M +AD+AL++ AATAL+FRLA + Sbjct: 308 NVLGSAGVQRQALAQALHHARHRTAFQKRLVDQPLMTNVLADLALEVEAATALAFRLARA 367 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 FD A+ E R++ P K+W CK P + AEA+E +GG+GYIE+ + R YRE P Sbjct: 368 FD-AREDEPETLLRRLVTPAAKFWVCKRGPILAAEALEVLGGAGYIEDSGMPRLYRELPV 426 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493 SI GSGN + LDVL L++ E + + L ++ L + + V++ R + Sbjct: 427 YSIWEGSGNVVCLDVLRALQREPRCLEAVAAELAPLAGVDRRLDAQIEVVLSAPRQGLG- 485 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 +G R + + AA L R I+D FL R Sbjct: 486 ----EGDLRRYCRDLVVTVQAALLARHAPPIISDAFLATR 521 >gi|256390950|ref|YP_003112514.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357176|gb|ACU70673.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 550 Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 200/535 (37%), Positives = 286/535 (53%), Gaps = 16/535 (2%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANF---PSVVHKELELLGEYVLSCTAQELA 74 P+D LNQ P G NAY++D LVA + S EL LG S A+E Sbjct: 9 PADE--PLNQVPPLAGYNAYTADPSLVAAVHRLFGSGSATDTELTGLGALAGSFEAREWG 66 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 R+A N P L + G R D+VEFHPAWH L+ ++ G+ + W + H Sbjct: 67 RLAEANHPILRTHDRYGRRIDEVEFHPAWHELMTVAVSHGIAAAPWLEDAGTL----RHT 122 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 RAA++ + Q E GHL S+T A++ AL P + +W P++ S YD + P K Sbjct: 123 ARAAKMLVWGQTEGGHLCPVSMTYAAVPALAADPMLAAEWTPRLASTSYDFGLRDPATKA 182 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 G+G+TEK+GG+D+ A T++ SD Y L GHKWF S+PM D F++LAQ G Sbjct: 183 GCLAGMGMTEKQGGSDVRANTTKATPAAGSDREYTLIGHKWFTSAPMCDVFLVLAQAPGG 242 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF++PR+L DGS N QRLK+K+GNR+NA+ E+EF NT + LGD + +M Sbjct: 243 LTCFVIPRVLPDGSRNSFRLQRLKDKLGNRANASSEVEFHNTRAWRLGDEGRGVATIIEM 302 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + LD S S MR +LAEA+H+ R R G +L DQP+M+ +AD+AL+ AAT Sbjct: 303 VAMTRLDCVTGSASLMRAALAEAVHHTRHRMAFGKLLADQPLMRNVLADLALESEAATLT 362 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 S LA + D A S + RI + KYW K AEA+EC+GG+GY+EE + R Sbjct: 363 SLHLAAATD-AGSDPAARKFRRIGLAVAKYWVTKRCAPFAAEALECLGGNGYVEESGMPR 421 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490 YRE+P NSI GSGN LDVL L + +++ + + G+ + L+D Sbjct: 422 LYREAPLNSIWEGSGNVNALDVLRALGREDGVWDAFCAEVGTACGADARFDAAFKELKDE 481 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCML 545 ++ D+ AR E++AL + + R + D F+ +R + T L Sbjct: 482 VA--SVDEAGARRFVERMALLMQGSLMLRYAPTESGDAFVASRLAGDWGRTFGTL 534 >gi|297190427|ref|ZP_06907825.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197720450|gb|EDY64358.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 579 Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 201/543 (37%), Positives = 287/543 (52%), Gaps = 8/543 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 +D+ NQPP +G + LL L ++L +G S A AN Sbjct: 33 ADTHLVTNQPPPLVGHDVADDAVLLEGLRREGAGWYTEDLHRIGRLAGSEQVLRWAEEAN 92 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 P L + G R D+V+FHP++HAL+ +I +GL + W R AH RAA Sbjct: 93 RCEPVLRTHDRYGNRIDEVDFHPSYHALMDVAISEGLGGAPWADD-----RPGAHVARAA 147 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + E GH S+T A + AL + PR+ + P + SR YDP +AP K + Sbjct: 148 GFMVWSSAEQGHGCPVSMTYAVVPALRSAPRLAALYEPLLTSRVYDPGMRAPAGKRGLLA 207 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+G+TEK+GGTD+ A T+ + DG + L GHKWF S+PM+D F++LAQ G + CFLV Sbjct: 208 GMGMTEKQGGTDVRANTTTATEQPDGTWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLV 267 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG N QRLK+K+GNRSNA+ E EF +T G L+G + DM + L Sbjct: 268 PRVLPDGGRNTFRIQRLKDKLGNRSNASSEPEFDDTVGMLVGAEGQGVRTIIDMVTMTRL 327 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S SG+R +L +A H+ R R V G LIDQP+M+ +AD++++ AAT L+ R+A Sbjct: 328 DCVLGSASGIRTALTQAAHHVRHRSVFGAKLIDQPLMRNVVADLSIESEAATTLALRVAG 387 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D A + ++E A+ R+ + KYW CK PA +AEA+EC+GG+GY E + R YRE+ Sbjct: 388 AADRAQRGDAQERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREA 447 Query: 438 PANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495 P N I GSGN LDVL L E G+ + LR ++ L + Sbjct: 448 PLNGIWEGSGNVNALDVLRALTREPGSLEAYAAEIEAAAGADARLDAAWRELRGALVLTE 507 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR L E++AL + L R +AD F +R + L + A I Sbjct: 508 DAALGARRLVERMALVLQGSLLVRHAPAAVADAFCASRLAGDRGLAFGTLPTGLDLAAAI 567 Query: 556 DSL 558 D L Sbjct: 568 DRL 570 >gi|21219626|ref|NP_625405.1| oxidoreductase [Streptomyces coelicolor A3(2)] gi|10803136|emb|CAC13064.1| putative oxidoreductase [Streptomyces coelicolor A3(2)] Length = 567 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 198/511 (38%), Positives = 273/511 (53%), Gaps = 7/511 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +A LL L L LG S AQ+ +AN + P L Sbjct: 33 NQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRHEPVLR 92 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+HP+WH L+R ++ +GL + W R AH R A + Sbjct: 93 THDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWADG-----RPGAHVARTAGGLVWGH 147 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 EAGH S+T A++ AL P + + + P + SREY+P + P K + G+G+TEK Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLTSREYEPGLRTPTDKRGLLAGMGMTEK 207 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ + ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 208 QGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVPRVLPD 267 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N QRLK+K+GNRSNA+ E EF T +L+G + +M LD + S Sbjct: 268 GTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMAS 327 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR +L EA H+ R R G L+DQP+M+ +AD+AL+ AATAL+ RLA + D A Sbjct: 328 ATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATALTLRLAGAADRAV 387 Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E EAA+ RI + KYW K PA AEA+EC+GG+GY+EE + RHYRE+P SI Sbjct: 388 RGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 GSGN LDVL L + + LF L G+ + R L + + AR Sbjct: 448 EGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASETGARR 507 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534 L E +AL A+ L R +AD F R Sbjct: 508 LVELMALTLQASLLVRHAPPAVADAFCATRL 538 >gi|307543996|ref|YP_003896475.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] gi|307216020|emb|CBV41290.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] Length = 549 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 195/519 (37%), Positives = 289/519 (55%), Gaps = 17/519 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP + D + AL P V + L LG V S + L AN + P+L Sbjct: 17 NQPPPPEDRDLLEDDLPMREALAREAPDWVAERLAPLGRDVGSEHVRALGEAANRHPPEL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D V++HPA+H L+ ++ G H W + H+ A LYL+ Sbjct: 77 RLFDRYGRRLDAVDYHPAYHELMHLAMDHGWHAVAWQEEG-----RGGHQAHVAALYLLT 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T A+M AL +P +H+ W+P + +YDP +KT++ G+ +TE Sbjct: 132 QAEPGFCCPVTMTHAAMPALRHSPSLHERWSPGLLHWDYDPRALPAERKTALTFGMAMTE 191 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+Q ++DG + L+GHKWF S+PMSDAF+ LAQ + +GCFLVPR D Sbjct: 192 KQGGSDVRANTTQATPVADG-WRLNGHKWFCSAPMSDAFLTLAQTDDGLGCFLVPRFTPD 250 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G N + QRLK+K GNR+NA+ E+E+ +T+ LG+ + M LD+A Sbjct: 251 GERNAIELQRLKDKCGNRANASAEIEYRDTWAEPLGEPGRGVATILSMVQQTRLDAATAP 310 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EA 383 V+ MR +L+EA + R RH G L +QP+M+ +AD+AL++ A AL+ R A +FD A Sbjct: 311 VAMMRQALSEAWRHVRARHAFGRCLAEQPLMRTLLADMALEVEAGVALTLRTARAFDGAA 370 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + E A AR++ + KYW K APA +AEAMEC+GG GY+EE +AR YRE+P NSI Sbjct: 371 RGDAHETALARLLPALAKYWHNKRAPAFLAEAMECLGGIGYVEESPLARLYREAPVNSIW 430 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKED 497 GSGN + LDVL + + L L+ G+S ++++T L + Sbjct: 431 EGSGNVICLDVLRVFGRHPEALTALRQELDAARGASSALDTAMQELVTRLEAPPDTLERQ 490 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 AR+LT+++A A L R +I + F +RF+D Sbjct: 491 ---ARWLTQRLAQCLQGALLLRHAPAEIGETFCRSRFID 526 >gi|326774735|ref|ZP_08234000.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] gi|326655068|gb|EGE39914.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 552 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 207/523 (39%), Positives = 294/523 (56%), Gaps = 11/523 (2%) Query: 17 QPSDSLFAL-NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELA 74 +P+D + NQPP G +A + D++L+ I + H EL G YV S AQ A Sbjct: 10 RPTDVTHEVTNQPPPLTGHDA-ADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWA 68 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 AN + P+L + G R D+VEFHPA+H+L+ S+ GL + W R AH Sbjct: 69 DQANRHEPELRTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHV 123 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 RA L LE GHL S+T A + AL +P + K + P + SR Y+P AP K Sbjct: 124 ARAGGFMLATMLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTSRVYEPGLSAPTAKR 183 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + G+G+TEK+GGTD+ A T+ + +DG + L GHKWF S+PM+D F++LAQ G + Sbjct: 184 GLLAGMGMTEKQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLS 243 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVPR+L DGS N QRLK+K+GNRSNA+ E EF +T +L+GD + DM Sbjct: 244 CFLVPRVLADGSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVT 303 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + LD + S +G+R +LA+A H+AR R V G L+DQP+M+ +AD++L+ AAT L+ Sbjct: 304 MTRLDCVLGSAAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLAL 363 Query: 375 RLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RLA + D A + E A+ R+ I KYW CK P +AEA+EC+GG+GY E + R Sbjct: 364 RLAGAADRAHRGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRL 423 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491 YRE+P N I GSGN LD+L L + E + E G+ + LR + Sbjct: 424 YREAPLNGIWEGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRAEL 483 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + ++ + AR + E+ AL + L R +AD F +R Sbjct: 484 ARAQDAQLRARRVVERAALVLQGSLLVRHAPTAVADAFCASRL 526 >gi|256789299|ref|ZP_05527730.1| oxidoreductase [Streptomyces lividans TK24] gi|289773187|ref|ZP_06532565.1| oxidoreductase [Streptomyces lividans TK24] gi|289703386|gb|EFD70815.1| oxidoreductase [Streptomyces lividans TK24] Length = 567 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 197/511 (38%), Positives = 272/511 (53%), Gaps = 7/511 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +A LL L L LG S AQ+ +AN + P L Sbjct: 33 NQPPPLAPYDASDDTVLLEGLRREGAGWAEDGLRRLGRRAGSAQAQDWGDLANRHEPVLR 92 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+HP+WH L+R ++ +GL + W R AH R A + Sbjct: 93 THDRYGNRVDEVEYHPSWHHLMRVAVGEGLAGAPWADG-----RPGAHVARTAGGLVWGH 147 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 EAGH S+T A++ AL P + + + P + SREY+P + P K + G+G+TEK Sbjct: 148 TEAGHGCPTSMTYAAVPALRAQPELAEVYEPLLASREYEPGLRTPTDKRGLLAGMGMTEK 207 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ + ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 208 QGGSDVRTNATTATATAEPGVYTLRGHKWFTSAPMCDVFLVLAQAAGGLSCFLVPRVLPD 267 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N QRLK+K+GNRSNA+ E EF T +L+G + +M LD + S Sbjct: 268 GTRNTFRVQRLKDKLGNRSNASSEPEFDGTVAWLVGPEGQGVKTIIEMVNCTRLDCVMAS 327 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR +L EA H+ R R G L+DQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 328 ATLMRKTLVEAGHHVRHRTAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 387 Query: 385 SRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E EAA+ RI + KYW K PA AEA+EC+GG+GY+EE + RHYRE+P SI Sbjct: 388 RGDEGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 447 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 GSGN LDVL L + + LF L G+ + R L + + AR Sbjct: 448 EGSGNVNALDVLRALGRSPAAAQALFGELSLARGADARLDAAADRLRTGLTEASETGARR 507 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534 L E +AL A+ L R +AD F R Sbjct: 508 LVELMALTLQASLLVRHAPPAVADAFCATRL 538 >gi|158318169|ref|YP_001510677.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158113574|gb|ABW15771.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 572 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 181/436 (41%), Positives = 248/436 (56%), Gaps = 6/436 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +G + +LL AL + +L LG + AQ AN P L Sbjct: 14 NQPPPLVGHDVAEDPALLEALAREGAAGHADDLHRLGRLAGTAEAQRWGDEANRCPPVLR 73 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHPAWH LLR ++ GL + W R AH RAA + Q Sbjct: 74 THDRYGNRVDEVDFHPAWHELLRVAVGAGLAGAPWAAD-----RPGAHVARAAGFLVWGQ 128 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GHL S+T A AL P + + P + S YDP + P+ K + G+G+TEK Sbjct: 129 VEQGHLCPVSMTYAVTPALRAAPDLAAAYLPGLTSTVYDPGLRPPLSKRGLLAGMGMTEK 188 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A + DG Y L GHKWF S+PM+D F++LAQ G + C LVPR+L DG Sbjct: 189 QGGSDVRANETIAVPAGDGSYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPRVLPDG 248 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N QRLK+K+GNRSNA+ E EF T G L+G + +M L LDSA+ + Sbjct: 249 GRNPFLIQRLKDKLGNRSNASAEPEFDRTLGHLVGTEGRGVRAIIEMVALTRLDSAVGAA 308 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 SGMR +L A H+ R R G +LID+P+M+ +AD+A++ AA AL R+A + D A+ Sbjct: 309 SGMRAALVAAAHHTRHRSAFGSLLIDKPLMRNVLADLAVESEAAVALVMRVAGAVDRAEH 368 Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E E A+ R+ + KYW CK PA++AEA+EC+GG+GY+EE + R YRE+P N I Sbjct: 369 GDEGERAFRRLATGLAKYWVCKRQPAMVAEALECLGGNGYVEESGLPRLYREAPLNGIWE 428 Query: 445 GSGNAMVLDVLNLLEK 460 GSGN LDV+ L + Sbjct: 429 GSGNVNALDVVRALGR 444 >gi|329940263|ref|ZP_08289545.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] gi|329301089|gb|EGG44985.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] Length = 544 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 194/540 (35%), Positives = 295/540 (54%), Gaps = 20/540 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVH-----KELELLGEYVLSCTAQELARMANYN 80 NQ P +G + +S+D LV + + H EL LG S QE +AN N Sbjct: 10 NQAPPLVGYDVFSADRALVEAVERHVAPEHLGEVTGELTGLGRSAGSAQVQEWGVLANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+V+FHP+WH LL + + GL + W R H RAA Sbjct: 70 PPTLRTHDRYGNRLDEVDFHPSWHRLLGKGVSAGL-TAAWSR-------PAGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG+ S+T A++ AL T P + +W P++ S YD + +K V G+ Sbjct: 122 VVWTQVEAGNGCPLSMTHAAVPALRTDPVLAAEWEPRLTSVVYDRGLRPAARKAGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T++ + +++ G Y L GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTEARPLAEEGTYALRGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+LEDG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 242 RVLEDGTRNVFLIQRLKDKLGNRSNASSEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + + MR ++A+A+H+A R G +L+D+ +M+ +AD+AL+ AATAL RLA + Sbjct: 302 CVLGAAALMRQAVAQAVHHASHREAFGSLLVDKALMRNVLADLALESEAATALGLRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D+ +E A R+ P KYW K ++AEA EC+GG+GY+EE + R RESP Sbjct: 362 YDDGG--EQERALLRLAVPAAKYWVTKRCTPLVAEASECLGGNGYVEESGMPRLLRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKE 496 NS+ G+GN LDVL L + + + G+ + V +L D L + Sbjct: 420 NSVWEGAGNVQALDVLRALRREPRAIDAFLREVGTTRGADHRLDGAVKNLLTDLADL-EG 478 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 +G AR + E++AL + L R ++AD F +R + + L + A ++D Sbjct: 479 VEGRARRVVERMALVLQGSLLVRYAPPEVADAFCASRLGGDWGTAFGTLPHTLDLASVVD 538 >gi|182434223|ref|YP_001821942.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462739|dbj|BAG17259.1| putative oxidoreductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 552 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 204/513 (39%), Positives = 289/513 (56%), Gaps = 10/513 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G +A + D++L+ I + H EL G YV S AQ A AN + P+L Sbjct: 20 NQPPPLTGHDA-ADDAVLLEGIRREGAAWHVDELHRFGRYVGSEEAQHWADQANRHEPEL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPA+H+L+ S+ GL + W R AH RA L Sbjct: 79 RTHDRFGHRIDEVEFHPAYHSLMEASVRAGLAGAAWADE-----RPGAHVARAGGFMLAT 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 LE GHL S+T A + AL +P + K + P + +R Y+P AP K + G+G+TE Sbjct: 134 MLEQGHLCPVSMTYAVVPALRRSPDLAKTYEPLLTNRAYEPGLSAPTAKRGLLAGMGMTE 193 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ A T+ + +DG + L GHKWF S+PM+D F++LAQ G + CFLVPR+L D Sbjct: 194 KQGGTDVRANTTAAVERADGTWRLRGHKWFTSAPMNDLFLVLAQSPGGLSCFLVPRVLAD 253 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK+K+GNRSNA+ E EF +T +L+GD + DM + LD + S Sbjct: 254 GSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 313 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +G+R +LA+A H+AR R V G L+DQP+M+ +AD++L+ AAT L+ RLA + D A Sbjct: 314 AAGIRAALAQAAHHARHRSVFGARLVDQPLMRNVLADLSLESEAATTLALRLAGAADRAH 373 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A+ R+ I KYW CK P +AEA+EC+GG+GY E + R YRE+P N I Sbjct: 374 RGDDGERAFLRLATAIGKYWVCKRQPMAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 433 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LD+L L + E + E G+ + LR ++ ++ + A Sbjct: 434 EGSGNVNALDMLRALTREPASLEAFHAETEAAAGADARLDAARRELRTELARAEDAQLRA 493 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E+ AL + L R +AD F +R Sbjct: 494 RRVVERAALVLQGSLLVRHAPTAVADAFCASRL 526 >gi|302527371|ref|ZP_07279713.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302436266|gb|EFL08082.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 538 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 199/513 (38%), Positives = 281/513 (54%), Gaps = 11/513 (2%) Query: 25 LNQ-PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +NQ PPL + + +L A+ S V EL LG S QE +R+ N N P Sbjct: 8 VNQVPPLE--HDVAADPALAEAVGRTEASWVVDELHELGRLAGSEQVQEWSRLVNENEPV 65 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+VEFHP WH L+ ++ GL + W R AH RAA+ Y+ Sbjct: 66 LRTHDRYGHRIDEVEFHPHWHDLMNVAVSHGLQAAPWRDE-----RPGAHAARAAKFYVW 120 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q EAGH S+T A++ AL P + ++ P + S EYD + P K + G+ +T Sbjct: 121 SQSEAGHTCPISMTYAAVPALRANPELAAEYEPLLASTEYDFGLREPGTKRGLIAGMSMT 180 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GG+D+ A T+ + DG Y L GHKWF S+PMSD F+ LAQ G + CFL+PR+L Sbjct: 181 EKQGGSDVRANTTSARPAGDGSYRLVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPRVLP 240 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DGS N + QRLK+K+GNRSNA+ E+E+ + G+L+G+ + +M LD A+ Sbjct: 241 DGSRNPIRLQRLKDKLGNRSNASSEIEYDDAVGWLVGEEGRGVRTIIEMVNNTRLDCALG 300 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S SGMR+ A+H+A RH G L+DQP+M +AD+ L+ AA A S RLA + D Sbjct: 301 SSSGMRLGAVRAVHHATHRHAFGKALVDQPLMANVLADLVLEAEAAVAASMRLAAAGDRP 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E+ A+ R+ +TKYW CK AP AEA+EC GG+GY+EE + R YRE+P SI Sbjct: 361 GDEQEQ-AFRRLGLAVTKYWVCKRAPMHAAEALECFGGNGYVEESGMPRLYREAPLMSIW 419 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LD L + + F+ +EQ G + + L+ +S + + A Sbjct: 420 EGSGNVAALDALRAMGRQPESVAAFFAEVEQAAGGDARLDDAVDRLKKDLSDVDDLEFRA 479 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E +AL + L R +AD F RF Sbjct: 480 RRVVESMALVLQGSLLVRHAPRAVADAFCGTRF 512 >gi|304311840|ref|YP_003811438.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301797573|emb|CBL45793.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 558 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 198/507 (39%), Positives = 277/507 (54%), Gaps = 13/507 (2%) Query: 35 NAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93 N Y+SD SL+ AL A L GE V +AN N P H + G R Sbjct: 29 NVYTSDPSLVEALRAYGVDPTDDGLTRFGELVGESEFIRHGFLANENKPVFHTHDRFGHR 88 Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 D+V++HP++H L+ SI GLH W R AH RAA YLMAQ+EAGH Sbjct: 89 IDQVDYHPSYHVLMDTSIRHGLHSLPWTDQ-----RNNAHVYRAAHSYLMAQMEAGHGCP 143 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 ++T A L P + W PKI + YDP N K + IG+ +TEK+GG+D+ + Sbjct: 144 ITMTFACAPTLKKQPDIAAQWLPKITAHHYDPRNIGYQHKQGLTIGMAMTEKQGGSDVRS 203 Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 T++ + G +Y L GHK+F+S+PM DAF+ LA + + CFL+PR EDGS N Sbjct: 204 NTTRAFPVGQGGPGKLYQLVGHKFFMSAPMCDAFLALAYTDKGLSCFLMPRWNEDGSKNH 263 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + Q+LK+K+GN SNA+ E+EF +L+GD + +M L D + S S MR Sbjct: 264 VHIQQLKDKMGNVSNASSEVEFRGAKAWLIGDEGRGVANILEMVALTRFDCLVGSASSMR 323 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 A+A+ + R G +LI+QP+M+ +AD+A++ AA L R+AN+ DE +S ++ Sbjct: 324 QCTAQAVFHCANRAAFGKLLIEQPLMRNVLADLAVESDAALHLWLRVANALDE-QSNPQQ 382 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA+ RI I KYW CK +P EAMECIGGSG +E + R YRE+P N+I GSGN Sbjct: 383 AAFLRIATAIGKYWVCKRSPGHAYEAMECIGGSGVMERCIMPRLYREAPINTIWEGSGNV 442 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEK 507 LDV+ +EK E LFS L Q G + ++ ++ +S E + AR E Sbjct: 443 QCLDVMRAMEKSPECVEALFSELAQSQGHDTQLDALVLSIKRHLSNTDEIEWRARQTVED 502 Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534 +ALA A+ L R G + A+ FL R Sbjct: 503 MALALQASLLVRHGHSATAEAFLATRL 529 >gi|120556487|ref|YP_960838.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326336|gb|ABM20651.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 563 Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 194/538 (36%), Positives = 286/538 (53%), Gaps = 13/538 (2%) Query: 25 LNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +NQP N Y DS L A++ ++L G + EL +AN N P Sbjct: 24 INQPRPLENYNLYEQDSALREAVLREGAGHASEDLSRFGAWAGKADTIELGNLANANKPS 83 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + G R D+V FHPA+H L+R ++ +GLH S W K AH RAA+ YL Sbjct: 84 FRTHDRYGHRVDEVTFHPAYHELMRVALENGLHSSPWTNPG-----KGAHVARAAKYYLH 138 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EA H ++T A++ ++ P + K WAPKI + EYD N KTSV IG+ +T Sbjct: 139 SQVEAAHCCPVTMTFAAIPSIQNQPDLAKLWAPKILANEYDSRNVPDGDKTSVTIGMAMT 198 Query: 204 EKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T+ G++ Y L GHKWF+S+PM DAF++LAQ + CFL+P Sbjct: 199 EKQGGSDVRANTTVAYPTGREGPGQAYELVGHKWFVSAPMCDAFLVLAQTTNGLSCFLMP 258 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N Q+LKNK+GN +NA+ E+E +++G+ + +M + D Sbjct: 259 RWRPDGSKNPWQVQQLKNKMGNVANASSEVEIRGALAWMVGEEGRGVRTIIEMVAMTRFD 318 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S +GMR ++A+A H+ R G L DQP+M+ +AD+ ++ AA A + R+A + Sbjct: 319 CMIGSAAGMRQAVAQATHHCHNRSAFGATLSDQPLMQNVLADLIIENEAALAYTMRVARA 378 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D ++ E AR+ P+ KYW CK P EAMECIGGSG +E+ + R +RESP Sbjct: 379 MDN-QNNEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLFRESPV 437 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 N+I GSGN LD L L+K + F + G+ + + + L+ + + Sbjct: 438 NAIWEGSGNVQCLDTLRALQKEPETLDAFFKETAEARGTDRRFDQYLAQLQHDFADISDF 497 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR L +++ALA + L R G D+AD F +R + L N A II Sbjct: 498 QYRARNLVDRMALAMQGSLLLRFGDKDVADAFCASRLQSGGGMNYGNLPSGTNPAAII 555 >gi|182435181|ref|YP_001822900.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463697|dbj|BAG18217.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 555 Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 195/539 (36%), Positives = 295/539 (54%), Gaps = 20/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80 NQ P +G + +++D L + P V+ LE LGE S QE AN + Sbjct: 10 NQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEWGARANAH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+V+FHP+WH LL ++ GL W R H RAA Sbjct: 70 PPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ L T P + +W P + S Y + PM+K +G+ Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEKAGALLGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+TEK+GGTD+ + T++ + +S DG Y L+GHKWF S+PMSD F++LAQ G + CFLV Sbjct: 182 GMTEKQGGTDVRSNTTRAEALSGADG-YLLTGHKWFCSAPMSDGFLVLAQAAGGLSCFLV 240 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M L Sbjct: 241 PRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWAHRVGEEGRGVRTIIEMVAATRL 300 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR ++++A+H++ R GG+LID+P+M+ +AD+AL+ AAT L+ RLA Sbjct: 301 DCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVLAMRLAA 360 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++DE EE A+ R+ P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 361 AYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAP 418 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 NS+ GSGN LDVL L++ + + + G+ + I L ++ + Sbjct: 419 LNSLWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTELADLEG 478 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR + E+IAL + L R +++D F +R + S L + A ++ Sbjct: 479 VEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLDLASVV 537 >gi|326775818|ref|ZP_08235083.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] gi|326656151|gb|EGE40997.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 555 Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 196/539 (36%), Positives = 295/539 (54%), Gaps = 20/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHKELELLGEY---VLSCTAQELARMANYN 80 NQ P +G + +++D L + P V+ LE LGE S QE AN + Sbjct: 10 NQVPPLVGHDVFAADRALSEAVERHVAPGVLPVALEELGELGRAAGSAQVQEWGARANAH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+V+FHP+WH LL ++ GL W R H RAA Sbjct: 70 PPVLRTHDRFGHRVDEVDFHPSWHRLLGHAVSAGL-TDAWGR-------PAGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ L T P + +W P + S Y + PM+K +G+ Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPTLRTDPALAAEWEPLLTSHTYVEGLRNPMEKAGALLGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+TEK+GGTD+ + T++ + +S DG Y L+GHKWF S+PMSD F++LAQ G + CFLV Sbjct: 182 GMTEKQGGTDVRSNTTRAEALSGADG-YLLTGHKWFCSAPMSDGFLVLAQAAGGLSCFLV 240 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M L Sbjct: 241 PRVLPDGTRNVFAIQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRL 300 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR ++++A+H++ R GG+LID+P+M+ +AD+AL+ AAT L+ RLA Sbjct: 301 DCVVGSAALMRQAVSQAVHHSAYRRAFGGLLIDKPLMRNVLADLALESEAATVLAMRLAA 360 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++DE EE A+ R+ P KYW K AV+ EA+EC+GG+GY+EE + R RE+P Sbjct: 361 AYDE--DTDEERAFLRLAVPAAKYWVTKRCSAVVGEALECLGGNGYVEESGMPRLLREAP 418 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 NSI GSGN LDVL L++ + + + G+ + I L ++ + Sbjct: 419 LNSIWEGSGNVQALDVLRALQREPRALDAFLREVGRARGADHRLDAAIKGLLTELADLEG 478 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR + E+IAL + L R +++D F +R + S L + A ++ Sbjct: 479 VEARARRVVERIALVLQGSLLVRWAPPEVSDAFCASRLGGDWGSAFGTLPHSLDLASVV 537 >gi|288918131|ref|ZP_06412488.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288350513|gb|EFC84733.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length = 563 Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 200/525 (38%), Positives = 276/525 (52%), Gaps = 38/525 (7%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +G + LL AL+ +EL LG AQ AN + P L Sbjct: 14 NQPPPLVGHDVAEDVPLLAALVREGAGDQAEELHRLGRLAGGAEAQSWGDEANRHPPVLR 73 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHPAWH LL ++ GL S W R AH RAA + + Q Sbjct: 74 THDRYGNRIDEVDFHPAWHELLTVAVRAGLAGSAWAAD-----RPGAHVARAAGILVWGQ 128 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GHL S+T A++ + T P + + P + S YDP + P K + G+G+TEK Sbjct: 129 VEHGHLCPVSMTYAAVPVVRTAPDLAAAYLPGLTSSVYDPGLRPPESKRGLLAGMGMTEK 188 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A ++ + G Y L GHKWF S+PM+D F++LAQ G + C LVPR+L DG Sbjct: 189 QGGSDVRANETRATPVGGGTYLLRGHKWFTSAPMNDVFLVLAQAPGGLSCLLVPRVLPDG 248 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N QRLK+K+GNRSNA+ E EF T L+G+ + DM L LDSAI + Sbjct: 249 SRNPFLIQRLKDKLGNRSNASAEPEFDGTLAHLVGEEGRGVRAIIDMVALTRLDSAIGTA 308 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 SGMR +L A H+ R R G +L+D+P+M+ +AD+AL+ AA L R+A + D A+ Sbjct: 309 SGMRAALVAAAHHVRHRSAFGSLLVDKPLMRNVLADLALESEAAVTLVMRVAGAVDRAEQ 368 Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E E A+ R+ + KYW CK PA++AEA+EC+GG+GY+E+ + R YRE+P N I Sbjct: 369 GDEGERAFLRLATGLAKYWLCKRQPAMVAEALECLGGNGYVEDSGLPRLYREAPLNGIWE 428 Query: 445 GSGNAMVLDVLNLLEK-----------------GTNLFEQLFSTLEQDLGSSGKKVITIL 487 GSGN LDVL L + G + + L DL Sbjct: 429 GSGNVNALDVLRALGREPASLAAYAAEIDAAAGGNRHLDDAWRRLRHDL----------- 477 Query: 488 RDSISLCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVF 529 D++ E L AR L E++AL A L R +AD F Sbjct: 478 -DALLTADEPVELELVARRLVERMALLLQGALLVRHAPPAVADAF 521 >gi|56476533|ref|YP_158122.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56312576|emb|CAI07221.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 542 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 201/515 (39%), Positives = 285/515 (55%), Gaps = 11/515 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P+ N + +D L + + H E L GE + S Q LA++A+ + P+ Sbjct: 8 FNQVPVLSDCNLFDTDIALREAVVRDGAGWHAEALHGQGEVLGSADTQRLAQLADRHVPE 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L AY G R D V+FHPAW LL DG+H S W FEP R AH RAA +L Sbjct: 68 LVAYDRCGRRVDDVDFHPAWSCLLALLYADGVHSSAW---FEP--RPGAHVARAASFFLH 122 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q EAG L ++T AS+ L P + A K SR+YD + K S IG+G+T Sbjct: 123 GQAEAGSLCPVTMTFASIPVLRREPALFGALADKFRSRDYDGRDVPLAGKRSAMIGMGMT 182 Query: 204 EKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 EK+GG+D+ A T++ + ++ G + L GHKWF S P DA ++LA + CF VPR Sbjct: 183 EKQGGSDLRANTTEARPLAAGSRDHLLVGHKWFFSVPTCDAHLVLAHSPAGLSCFFVPRW 242 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 L DGS N + +RLK+K+GNRSNA+ E+EF + FG L+GD + +M LD Sbjct: 243 LPDGSRNAVRIRRLKDKLGNRSNASAEVEFEDAFGTLVGDEGRGIATIMEMAAQTRLDCV 302 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + S + MR +L EAIH+AR R G +L+ QP+M+ +A++AL+ AT L+ RLA + Sbjct: 303 LGSAALMRRALVEAIHHARHRSAFGNVLVAQPLMRNVLAELALESEVATMLAMRLAKAV- 361 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 E+ E A+ RI+ P K+W CK A A +AE ME GG+GY+E+ +AR YRE+P NS Sbjct: 362 ESDDDPLERAWRRIVTPAAKFWICKRAIAFVAECMEVWGGNGYVEDGPMARLYREAPVNS 421 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKG 499 I GSGN M LDVL + + E L+ L Q L + V + L + + E + Sbjct: 422 IWEGSGNVMCLDVLRAAAREPDGVEALWRELSQALAGNAALVHALGDLANRLRAPAEAEW 481 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + ++ L A L R ++A F+++RF Sbjct: 482 HARHVAMQLVLLVQAGLLLRHAPGNVAAAFIDSRF 516 >gi|145596492|ref|YP_001160789.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145305829|gb|ABP56411.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length = 542 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 194/520 (37%), Positives = 284/520 (54%), Gaps = 11/520 (2%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77 P+ +F NQ P + + +L L EL LG + A E R+A Sbjct: 2 PTHEVF--NQVPPLVDYDVADDPALRSGLAREGAGWAAAELHDLGRLGGAAAAIEHGRLA 59 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P L ++ G R D+VEFHP+WH L+R ++ GLH + W R AH RA Sbjct: 60 NEYPPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWADD-----RPGAHVARA 114 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ Y + +AGH S+T A++ AL P + + P + + YDP + + K + Sbjct: 115 AKFYTW-RPDAGHGCPISMTYAAVPALRHAPELAARYEPLLTATTYDPGLRPALGKHGLL 173 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G+ +TEK+GG+D+ A T+ Q +DG Y L GHKWF S+PM D F+ L Q G + CFL Sbjct: 174 AGMSMTEKQGGSDVRANTTIAQPEADGSYRLVGHKWFTSAPMCDLFLTLGQAPGGLTCFL 233 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR+L DG+ N L RLK K+GNRSNA+ E+E+ + + +GD + DM L Sbjct: 234 VPRVLPDGTRNPLRLMRLKEKLGNRSNASAEIEYEHAVAWRVGDEGRGVRTIIDMVNLTR 293 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I + +GMR + A+H+AR R G L+DQP+M+ +AD+A++ AAT L RLA Sbjct: 294 LDCLIGAAAGMRQEVVTAVHHARHRRAFGRQLVDQPLMRTVLADLAVESEAATVLMLRLA 353 Query: 378 NSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D A+ +++AA+ R+ + KYW CK P AEA+EC+GG+GY+EE + R +RE Sbjct: 354 GATDRAARGDADQAAFRRLGVAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRE 413 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 SP NSI GSGN VLDVL L + + + ++ G+ + + LR S++ Sbjct: 414 SPLNSIWEGSGNVAVLDVLRALTRQPRVLAAFEAEVDAAAGADARLDAAVRRLRASLADP 473 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL A L R G +A+ F +R Sbjct: 474 ADAPLRARHLVERLALVLQGALLVRHGHPAVAEAFCASRL 513 >gi|323527685|ref|YP_004229838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323384687|gb|ADX56778.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 568 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 203/552 (36%), Positives = 302/552 (54%), Gaps = 32/552 (5%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVL 66 +R + Q H+ + NQ P N +S+D+ L A + + H++ L G + Sbjct: 2 QRHSFGQTHEVT------NQVPPLADYNLFSTDAALSAAVERDGAAWHRDALLRHGAALT 55 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 + LA +AN +TP+L + P GER D +EFHPAWHALL +GLH + +P Sbjct: 56 TPETLALAELANRHTPELVTHSPRGERIDALEFHPAWHALLALLRREGLHALPFS---DP 112 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 R A R A +L AQ+E+G L ++T AS+ L P++ K+++RE+DP Sbjct: 113 --RPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYAREHDPR 170 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242 + KTS IG+G+TEK+GG+D+ + +Q + I+ G Y L GHKWF S+P DA Sbjct: 171 DLPLAHKTSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDA 230 Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 ++LA+ VG CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + FG ++G Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 D + +M LD I S + MR +L +AIH+AR R G L+DQP+M+ +A Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLA 350 Query: 361 DIALDIAAATALSFRLANSFDE-----------AKSRSEEAAYARIMAPITKYWCCKMAP 409 D+AL+ AAT L RLA++F++ + + E A+ RI+ P KYW CK Sbjct: 351 DLALESEAATVLFMRLAHAFEQSADAAATSAATSSAALAERAWRRIVTPAAKYWVCKRTL 410 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 EAME GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + LF Sbjct: 411 EFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALF 470 Query: 470 STLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526 + + D + + + + +L + +G AR + ++I L + A L + +A Sbjct: 471 AQWQADAAAHPALRAALGKLAATLHEPAEHREGSARRIAQQIVLIAQATLLVKHAPAAVA 530 Query: 527 DVFLENRFLDNC 538 D F+ R + C Sbjct: 531 DPFIATRLAEGC 542 >gi|327482383|gb|AEA85693.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 548 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 205/528 (38%), Positives = 289/528 (54%), Gaps = 18/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G N Y D L + L++ G Q +AN N P Sbjct: 14 NQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQA-GFLANENRPVF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+R ++ G+ W +P + A RAA +YL Sbjct: 73 KSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWT---DP--QPGAQVARAALMYLHN 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q EAG ++T AS+ AL P + + W PKI +REYDP N QK V IG+ +TE Sbjct: 128 QAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVTIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DG+ N QRLKNK+GN +NA+ E+E+ +++G+ + +M D Sbjct: 248 HRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMVASTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S S MR +L +A+H+ R V G L+DQP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALTLRMGRAQ 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E+ +AR++ I KYW CK AP +IAEA EC+GG+GY+EE + R YRE+P N Sbjct: 368 DHRRDEHED-KFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 SI GSGN LDVL L K + E LF+ L G + KV I L+ + ++ + Sbjct: 427 SIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFGDTEDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 AR LTE++A+A A L AG ++D F+ +R LD H +HG Sbjct: 487 RARQLTEEVAVALQAKLLLEAGDAAVSDAFIASR-LDG----HGRVHG 529 >gi|159039885|ref|YP_001539138.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157918720|gb|ABW00148.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length = 542 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 192/520 (36%), Positives = 285/520 (54%), Gaps = 11/520 (2%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77 P+ +F NQ P + + +LL L EL LG + A E R+A Sbjct: 2 PTHEVF--NQVPPLVDYDMADDPALLSGLAREGAGWATAELHDLGRLGGATAAIEHGRLA 59 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N + P L ++ G R D+VEFHP+WH L+R ++ GLH + W R AH RA Sbjct: 60 NEHPPVLRSHDRYGHRVDEVEFHPSWHELMRTAVTYGLHAAPWSDD-----RPGAHVARA 114 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ Y + +AGH S+T A++ AL P + + P + + YDP + + K + Sbjct: 115 AKFYTW-RPDAGHGCPISMTYAAVPALRHAPELAGRYEPLLTATTYDPGLRPALGKQGLL 173 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G+ +TEK+GG+D+ A T+ + +DG Y L GHKWF S+PM D F+ L Q G + CFL Sbjct: 174 AGMSMTEKQGGSDVRANTTTARPEADGSYRLVGHKWFTSAPMCDVFLTLGQAPGGLTCFL 233 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR+L DG+ N + RLK+K+GNRSNA+ E+E+ + + +GD + DM L Sbjct: 234 VPRVLPDGTRNPVRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTR 293 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I + +GMR + A+H+A R G L+DQP+M+ +AD+A++ AAT L RLA Sbjct: 294 LDCLIGAAAGMRQGVVTAVHHAVHRRAFGRQLVDQPLMRNVLADLAVESEAATVLMLRLA 353 Query: 378 NSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D A+ + EAA+ R+ I KYW CK P AEA+EC+GG+GY+EE + R +RE Sbjct: 354 GATDRSARGDTGEAAFRRLGVAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRE 413 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 SP NSI GSGN LDVL L + + + + ++ G+ + + LR S++ Sbjct: 414 SPLNSIWEGSGNVAALDVLRALTRDSQVLAAFEAEVDAAAGADPRLDAAVRRLRASLADP 473 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + AR L E++AL L R G +A+ F +R Sbjct: 474 ADAQLRARRLVEQLALVLQGMLLVRGGHPSVAEAFCASRL 513 >gi|71726097|gb|AAZ39220.1| putative acyl-CoA dehydrogenase [Janthinobacterium lividum] Length = 560 Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 201/535 (37%), Positives = 290/535 (54%), Gaps = 27/535 (5%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 D+ NQ F +N ++ D L+ AL+ +E++ LGE + LAR AN Sbjct: 5 DTHEVFNQATPFENVNLFACDPALIEALLREGGGAALQEIDALGEKLGRAETYALARQAN 64 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 +TP+L + G R D+V FHPAWH L+ + G H S W A RAA Sbjct: 65 IHTPELQQFDRAGRRVDEVLFHPAWHELMAILVGAGAHASPWASP-----GPGAQVARAA 119 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 L+ Q+E G ++T AS+ AL + P + + W PKI SREYDP + QK Sbjct: 120 AYLLVGQVENGTQCPVTMTYASVPALRQALDLPHIAQRWLPKILSREYDPRSLPVEQKRG 179 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKI------------SDGIYCLSGHKWFLSSPMSDAF 243 +G+G+TEK+GG+D+ + T++ + + G + + GHKWF S+P DA Sbjct: 180 ALVGMGMTEKQGGSDVRSNTTRAVPVPPAEAQALFGSEAGGAWRIVGHKWFFSAPQCDAH 239 Query: 244 IMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 ++LAQ EG + CF +PR L DGS N + QRLK+K+GNRSNA+ E+EF+N +G+L+G Sbjct: 240 LILAQADEGGLSCFFLPRYLPDGSRNAIRVQRLKDKLGNRSNASSEVEFTNAYGWLVGQP 299 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M LD + S MR +L++A+H+AR+R V G L +QP+M+ +AD+ Sbjct: 300 GRGIPTILEMASHTRLDCVLGSAGIMRAALSQALHHARQRAVFGKPLAEQPLMQNVLADL 359 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL+ AATA + RLA FDE K ++A AR++ P KYW CK P EAME +GG+ Sbjct: 360 ALESEAATAFALRLARCFDE-KDDPQQAMLARVLTPAGKYWICKRGPGFGFEAMEVLGGT 418 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 GY+E+ +AR YRE P NSI GSGN M LDVL K + + G Sbjct: 419 GYVEDAPLARLYRELPVNSIWEGSGNVMCLDVLRAFGK-SPAARDALAAELALAGDDDAI 477 Query: 483 VITI---LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ L + + D+ AR L+E+I LA A L R +A FL++R Sbjct: 478 LVDYRARLLADLDGPQTDEFGARQLSERIVLAVQGALLLRHAPPFVAQAFLQSRL 532 >gi|333023668|ref|ZP_08451732.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332743520|gb|EGJ73961.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 541 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 280/518 (54%), Gaps = 17/518 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + + +D L + S EL LG S AQE AN N Sbjct: 3 NQPPPLVGYDVFGADRALSEAVERHLHPALLSTARTELSELGRAAGSAQAQEWGAQANEN 62 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL S W R H RAA Sbjct: 63 PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 Q EAGH S+T A++ AL P + +W P + SR YD + K G+ Sbjct: 115 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFGM 174 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T++ ++ DG + L+GHKWF S+PMSD F++L Q G + CFLVP Sbjct: 175 GMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFLVP 234 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG N QRLK+K+GNRSNA+ E+EF T+ L+G+ + +M LD Sbjct: 235 RVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEMVSATRLD 294 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ S + MR ++A+AIH+A R GG L+ +P+M +AD+AL+ AAT L+ RLA + Sbjct: 295 CALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAAA 354 Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 +D A + E E A R+ P+ KYW K V+ EA+EC+GG+GY+EE + R RESP Sbjct: 355 YDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVVEALECLGGNGYVEESGLPRLLRESP 414 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 NS+ GSGN LDVL L++ + L G+ + + L ++ + Sbjct: 415 LNSLWEGSGNVQALDVLRALQREPGALDAFLGELGAARGADHRLDAAVKHLFQELADLEG 474 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 475 IEARARRLVERMALVLQGSLLVRFAPPEVADAFCASRL 512 >gi|330467883|ref|YP_004405626.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] gi|328810854|gb|AEB45026.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] Length = 542 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 197/519 (37%), Positives = 281/519 (54%), Gaps = 10/519 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P I + +LL L E+ LG S A E R+AN P L Sbjct: 8 NQVPPLIDHDTADDPALLEGLAREGAGWAVGEVRDLGRLAGSQPAIEHGRLANEYPPVLR 67 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP+WH L+R ++ GLH + W R AH RAA+ Y + Sbjct: 68 THDRYGHRIDEVEFHPSWHELMRTAVEHGLHAAPWADE-----RVGAHVARAAKFYTW-R 121 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A++ AL P + D P + +R YD + P+ K + G+ +TEK Sbjct: 122 PDAGHGCPISMTYAAVPALRHAPDLAADHEPLLTTRAYDFGLRPPLTKRGLLAGMSMTEK 181 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A + + DG Y L GHKWF S+PM D F+ LAQ G + CFLVPR+L DG Sbjct: 182 QGGSDVRANATTARPQPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPDG 241 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + RLK+K+GNRSNA+ E+E+ + +GD + DM L LD I + Sbjct: 242 TRNPMRLMRLKDKLGNRSNASAEVEYEQAAAWRIGDEGRGVRTIIDMVNLTRLDCVIGAA 301 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384 +GMR + A+H+A R G LIDQP+M+ +AD+A++ AAT L RLA + D A+ Sbjct: 302 AGMRQGVITAVHHATHRRAFGRALIDQPLMRNVLADLAIESEAATILMMRLAGATDRAAR 361 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + EAA+ RI I KYW CK P AEA+EC+GG+GY+EE + R +RESP NSI Sbjct: 362 GDATEAAFKRIALAIGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIWE 421 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LDVL L + + L+ G+ + + ++ +++ + + AR Sbjct: 422 GSGNVAALDVLRALAGQPEVLAAFRAELDAAAGADPRLDAAVRQVQAALADPADREVRAR 481 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF-LDNCHS 540 L E++AL A L R G +AD F +R D+ H+ Sbjct: 482 RLVEQLALVLQGALLVRHGHPAVADAFCASRLAADHGHA 520 >gi|146284066|ref|YP_001174219.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145572271|gb|ABP81377.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 619 Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 204/528 (38%), Positives = 288/528 (54%), Gaps = 18/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G N Y D L + L++ G Q +AN N P Sbjct: 85 NQVPPLEGANLYRLDLPLQQWTQRYHAGWAQGRLDVYGALAGGPLMQA-GFLANENRPVF 143 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+R ++ G+ W +P + A RAA +YL Sbjct: 144 KSHDRYGHRIDLVEFHPAYHELMRTAVEHGIPSLPWT---DP--QPGAQVARAALMYLHN 198 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q EAG ++T AS+ AL P + + W PKI +REYDP N QK V IG+ +TE Sbjct: 199 QAEAGSSCPLTMTYASVPALRLQPDLAERWLPKILAREYDPRNVPMEQKAGVTIGMAMTE 258 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 259 KQGGTDVRANTTRAFAVGAGGPGQAYELIGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 318 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DG+ N QRLKNK+GN +NA+ E+E+ +++G+ + +M D Sbjct: 319 HRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGALAWMVGEEGRGVPTIIEMVASTRFDC 378 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S S MR +L +A+H+ R V G L+DQP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 379 MIGSSSLMRQALTQAMHHCAHRRVGGRALLDQPLMQNVLADLALESEAALALTLRMGRAQ 438 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E+ +AR++ I KYW CK AP +IAEA EC+GG+GY+EE + R YRE+P N Sbjct: 439 DHRRDEHED-KFARLVTAIGKYWICKRAPTMIAEASECLGGAGYVEETILPRLYREAPVN 497 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 SI GSGN LDVL L K + E LF+ L G + KV I L+ + ++ + Sbjct: 498 SIWEGSGNVQCLDVLRALSKEPGVLEVLFAELGDGHGDARLKVHIQRLKAAFGDTEDIQY 557 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 AR LTE++A+ A L AG ++D F+ +R LD H +HG Sbjct: 558 RARQLTEEVAVTLQAKLLLEAGDAAVSDAFIASR-LDG----HGRVHG 600 >gi|183981022|ref|YP_001849313.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] gi|183174348|gb|ACC39458.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] Length = 542 Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 192/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ PL N +S L+ ALI +E+ LG S AQ +A+ Sbjct: 2 SDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGSAQAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VEF PA+H L+R +I GLH + W R AH +RAA Sbjct: 62 RNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL P + + P + SREYDP + K + Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLASTKPGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T++ SDG Y L+GHKWF S+PM D F++LAQ G + CF++ Sbjct: 176 GMSMTEKQGGSDVRAGTTEATPNSDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATTVAMRMAG 355 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D+A + EA + RI +KYW CK + AEA+EC+GG+GY+EE + R YRE+ Sbjct: 356 ATDKAVRGDQTEALFRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEESGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--ITILRDSISLCK 495 P I GSGN LD L + E LF L G ++ + LR + + Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHVEGLRRQLGDLE 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E I LA + L R G + + FL R Sbjct: 476 TIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRI 514 >gi|302537622|ref|ZP_07289964.1| acyl-CoA dehydrogenase [Streptomyces sp. C] gi|302446517|gb|EFL18333.1| acyl-CoA dehydrogenase [Streptomyces sp. C] Length = 551 Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 202/528 (38%), Positives = 284/528 (53%), Gaps = 33/528 (6%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-----PSV---VHKELELLGEYVLSCTAQELARMA 77 NQ P +G Y D L + P + V +EL LG S AQ R A Sbjct: 10 NQAPPLVGYEVYLGDRALTEGVERHLADAAPELRDEVREELTALGRAAGSAQAQRWGREA 69 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N N P L + G R D+VEFHPAWH LL ++ GL W R H RA Sbjct: 70 NENPPVLRTHDRYGNRIDEVEFHPAWHRLLGHAVGAGL-TDAWGR-------PAGHLRRA 121 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A +L +Q EAGH S+T A++ AL P + +W P++ S Y+ + QK V Sbjct: 122 AGFFLWSQAEAGHGCPVSMTHAAVPALRADPELAAEWEPRLTSHVYEEGLRPAGQKAGVL 181 Query: 198 IGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGR-- 252 G+G+TEK+GG+D+ A T+ + + G Y L+GHKWF S+PMSD F++LAQ GR Sbjct: 182 FGMGMTEKQGGSDVRANTTSAAPLDAAGEYVLTGHKWFCSAPMSDGFLVLAQAAPSGRNS 241 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CFLVPR+L DG+ N QRLK+K+GN+SNA+ E+EFS T+ +G+ + +M Sbjct: 242 LTCFLVPRVLPDGTRNAFAIQRLKDKLGNKSNASGEIEFSGTWARRVGEEGRGVRTIIEM 301 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD I S S MR +L +A+H+A R G LIDQP+M+ +AD+AL+ AAT L Sbjct: 302 VAATRLDCVIGSASLMRQALTQAVHHAEHRSAFGAPLIDQPLMRNVLADLALESEAATVL 361 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + RLA ++D +E A+ R+ P KYW K ++AEA+EC+GG+GY+EE + R Sbjct: 362 TLRLAAAYDAGT--DQERAFLRLAVPAAKYWVTKRCTPMVAEALECLGGNGYVEESGLPR 419 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ------LFSTLEQDLGSSGKKVITI 486 RESP NSI GSGN LDVL L++ L + L ++ K ++T Sbjct: 420 LLRESPVNSIWEGSGNVQSLDVLRALQREPQALNAFLLEVGLARGADHRLDAAIKNLLTE 479 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L D + + AR + E++AL + L R ++AD F +R Sbjct: 480 LADLDGI----EARARRVVERMALVLQGSLLVRWAPPEVADAFCASRL 523 >gi|330504987|ref|YP_004381856.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328919273|gb|AEB60104.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 549 Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 200/526 (38%), Positives = 283/526 (53%), Gaps = 15/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + +F NQ P G N Y D L + + E L G Q Sbjct: 5 LHAETHEVF--NQVPSLDGANLYRLDLPLQEWVRRYDGAWADERLSAYGALAGGALMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN N P ++ G R D VEFHPA+H L+R ++ GL W +P R AH Sbjct: 62 GFLANENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAVEHGLPSLPWT---DP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EA ++T A++ A+ P V + W PKI + EYDP N QK Sbjct: 117 VARAGLTYLHSQAEAASGCPLTMTFAAVPAIRLQPNVAEQWLPKILATEYDPRNLPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV 249 T V IG+ +TEK+GGTD+ A T++ I G Y L GHKWF S+PM DAF+ LA Sbjct: 177 TGVTIGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DG+ N QRLKNK+GN +NA+ E+E+ F ++LG+ + Sbjct: 237 DKGLSCFLLPRHRPDGTRNAFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S S MR +L +A H+ R V G +L+DQP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLVDQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL R+ + D + E+ +AR++ + KYW CK AP +I EA EC+GG+GY+EE Sbjct: 357 LALCMRMGRALDHQHDQQED-KFARLVTAVGKYWICKRAPEMIYEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + K I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLKAHIQRLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + AR LTE +A+A A L AG ++D F+ +R Sbjct: 476 ADFADTADIQYRARQLTEDMAVALQAKLLLEAGNATVSDAFIASRL 521 >gi|167568357|ref|ZP_02361231.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis C6786] Length = 559 Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 208/549 (37%), Positives = 303/549 (55%), Gaps = 20/549 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + + H+ L G + + A LA +AN + P+L Sbjct: 14 NQAPPLHDYNAFETDAALVDAVERYDASWHQTALARDGAALTTLDALALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL +GLH + R A R A +L A Sbjct: 74 STHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFS-----APRPGAMVARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + + K++SRE+D + +K S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFETLRGKLYSREHDARDAPLPEKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + +Q + G Y L GHKWF S+P DA ++LA+ G G CF V Sbjct: 189 KQGGSDVRSNETQAYPLGAGGRGEAYRLVGHKWFFSAPQCDAHLVLARTAGHAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AATAL RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ + LF+ S + L +SL Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFN 550 E + AR + ++IAL + A+ L R G +A+ F+ RF D T + L F+ Sbjct: 489 PEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYGTLPATFD 548 Query: 551 AAHIIDSLY 559 A +I+ + Sbjct: 549 HAALIERAF 557 >gi|88810286|ref|ZP_01125543.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] gi|88791916|gb|EAR23026.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] Length = 551 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 200/536 (37%), Positives = 285/536 (53%), Gaps = 12/536 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP A+S+D +L ++ + V + L LG S E +AN P+L Sbjct: 17 NQPPPLGDYQAFSTDRVLCEAVSREGAPWVSEYLRALGALTGSEQLMEQGFLANRQPPEL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P G R D+V +HPA+H L+ +I G+H WDR E H AA LYL+ Sbjct: 77 VTFDPYGRRIDEVRYHPAYHELMGLAIRHGVHSIAWDRQGE-----GGHVAHAAALYLLT 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T A++ AL V +DW P+I REYDP +K V G+ +TE Sbjct: 132 QPEQGVCCPITMTHAAVPALRLESAVAQDWEPRIRVREYDPRCLPSSEKAGVTFGMAMTE 191 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ Q + Y L+GHKWF S+PMSDAF+ LAQ + CFLVPR D Sbjct: 192 KQGGSDVRANTTRAQTLRGDQYTLTGHKWFCSAPMSDAFLSLAQTPAGLTCFLVPRWRPD 251 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G N QRLK+K+GNRSNA+ E+E+S+T+ +G+ + +M LD+A Sbjct: 252 GRRNPFFIQRLKDKLGNRSNASAEIEYSDTWARRVGEEGRGVRTIIEMVQQTRLDAATAP 311 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V MR + +A+H+ R R G LI QP+M+ +AD+AL++ A AL R+A +FD Sbjct: 312 VGMMRQAFVQALHHVRHRSAFGKPLIHQPLMRNLLADLALELEAGVALLLRIARTFDRGA 371 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E R+ + KYW K AP I EAMEC+GG+GY+EE + R YRE+P NSI Sbjct: 372 QDPHERLLGRVGTALAKYWTNKRAPEFIYEAMECLGGNGYVEESILPRLYREAPVNSIWE 431 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG--LAR 502 GSGN + LDVL +E+ + + ++ G + I R L + AR Sbjct: 432 GSGNVICLDVLRAIERDPQIVPAFLTEVDSARGGHRRLDAAIERFKQELGYREAAELRAR 491 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 + E +AL A+ L R +AD F E+R T ML+G A +D++ Sbjct: 492 RIAELMALTLQASLLVRHAPAAVADAFCESRL----GGTGGMLYGTLAAGVGVDAI 543 >gi|254429704|ref|ZP_05043411.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196195873|gb|EDX90832.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 564 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 194/547 (35%), Positives = 294/547 (53%), Gaps = 24/547 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ NAY +D+ L +A S L G S E +AN + PQ Sbjct: 20 FNQARALEDYNAYDNDTALREAVARHGASWAEDALSAHGARTGSAEVIEWGFLANEHKPQ 79 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 ++ G R D V++H ++H L+ + G+H S W + AH RAA+ YL Sbjct: 80 FFSHDRQGYRVDLVKYHESYHRLMALGLESGMHSSPWSNP-----KPGAHVARAAQSYLQ 134 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ++AGH ++T AS+ ++ TP + K+W PKI + YDP N +K ++ IG+G+T Sbjct: 135 AQVDAGHGCPLTMTFASVPSISLTPALAKEWLPKILNNAYDPRNVPHTEKQALTIGMGMT 194 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T+ I + Y L GHKWF S+PM DAF++LAQ +G + CFLVP Sbjct: 195 EKQGGSDVRANTTVATAIGNEGPGEAYELVGHKWFTSAPMCDAFLVLAQTQGGLSCFLVP 254 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N + QRLKNK+GN SNA+ E+E G+L+G+ + +M + D Sbjct: 255 RWRPDGSKNPIQVQRLKNKMGNVSNASSEIELRGALGWLVGEEGRGVPAIIEMVAMTRFD 314 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S SG R ++A+A+++A R G L+DQP+M+ +AD+ L++ + A++ R+ + Sbjct: 315 CMIGSASGQRQAVAQAVNHAAGRAAFGKTLLDQPLMRNVLADLQLEVEGSLAIAMRMGEA 374 Query: 380 FDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 D++ S S E+ R+ P KYW CK P EAMEC+GG+G E+ +AR YRE Sbjct: 375 LDQSTLDPSNSHESLLLRLGLPAGKYWICKRTPFHAYEAMECLGGNGVTEDFIMARLYRE 434 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P N+I GSGN LD+L L K + + F+ L + GS + K + L+ S Sbjct: 435 APINAIWEGSGNVQALDMLRALGKTPAVLDTWFAELAKTQGSDARLDKAVDTLKREFSDM 494 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554 E + AR + ++++L A+ L AG +A+ F+ +R + HG N + Sbjct: 495 DEAEYRARDIVDRVSLTMQASQLVAAGNTAVAEAFIASRLGE---------HGDRNYGTL 545 Query: 555 IDSLYLD 561 L LD Sbjct: 546 PKGLDLD 552 >gi|77461164|ref|YP_350671.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77385167|gb|ABA76680.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 549 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 199/528 (37%), Positives = 284/528 (53%), Gaps = 17/528 (3%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G + E Sbjct: 3 LHQFAETHEVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAESRIDAYGA-LAGGPLMEA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN N P ++ G R D VEFHPA+H L+R +I GL W + AH Sbjct: 62 GFLANQNKPVFASHDRYGHRIDLVEFHPAYHELMRTAIEHGLTSLPWAHP-----QDGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T AS+ A+ P + + W PKI + EYDP N K Sbjct: 117 VARASMSYLHSQAEAGSGCPLTMTFASVPAMRLQPNLAEHWLPKILATEYDPRNVGMAHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR D + N QRLKNK+GN+SNA+ E+EF +++G+ + Sbjct: 237 DKGLSCFLLPRHRPDDTRNQFYIQRLKNKLGNQSNASSEVEFRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S S MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + D R EA +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGKALDHLDDR-HEAQFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 + R YRE+P NS GSGN LDVL L K + + LFS L G K++ ++ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDVLFSELGD--GHGDKRLAAHIQQ 473 Query: 490 SISLCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + K+ + AR LTE IAL A L AG + ++D F+ +R Sbjct: 474 LQAQFKDTSDIQYRARQLTEDIALGLQAKLLLEAGNSAVSDAFIASRL 521 >gi|290956476|ref|YP_003487658.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] gi|260646002|emb|CBG69093.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] Length = 532 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 198/532 (37%), Positives = 297/532 (55%), Gaps = 19/532 (3%) Query: 35 NAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 + +++D +L +A P V +EL G S QE R+AN N P+L AY Sbjct: 4 DVFAADKVLDEAVARHLAPEVRDEAREELSGFGRTSGSAQVQEWGRLANENPPKLRAYDR 63 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R D+VEFHP+WH LL + + GL + W R H RAA + Q+EAG Sbjct: 64 YGNRVDEVEFHPSWHRLLGKGVSAGL-TAAW-------TRPGGHVRRAAAFVVWTQVEAG 115 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + S+T A++ AL T P + +W P++ S YD + QK G+G+TEK+GG+ Sbjct: 116 NGCPLSMTHAAVPALRTDPALAAEWEPRLTSLLYDRDMRPAAQKAGALFGMGMTEKQGGS 175 Query: 210 DIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268 D+ A + + ++ DG Y L+GHKWF S+PMSD F++LAQ G + CFLVPR+L DGS N Sbjct: 176 DVRANATAARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVPRVLADGSRN 235 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 QRLK K+GNRSNA+ E+EF T+ +GD + M LD A+ + S M Sbjct: 236 VFRIQRLKEKLGNRSNASAEVEFDGTWARRVGDEGRGVRTIIGMVAATRLDCALGAASLM 295 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 R ++A+A+H+ R GG LID+P+M+ +AD+AL+ AAT L+ R+A ++D A++ +E Sbjct: 296 RQAVAQAVHHCTYREAFGGPLIDKPLMRNVLADLALESEAATVLAMRVAAAYDAAEAGAE 355 Query: 389 -EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E A+ R+ P+ KYW K ++AEA EC+GG+GY+EE + R RESP NS+ G+G Sbjct: 356 NERAFLRLAVPVAKYWVTKRCTPLVAEAAECLGGNGYVEESGMPRLLRESPLNSVWEGAG 415 Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---ARFL 504 N LDVL L++ + + G+ ++ ++D ++ + +G+ AR L Sbjct: 416 NVQALDVLRALQREPGALDACLREVGAARGAD-HRLDGAIKDLLTELADLEGVEARARRL 474 Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 E++AL A L R +AD F +R + S L + A I++ Sbjct: 475 VERLALVLQGALLVRYAPPAVADAFCASRLGGDRGSAFGTLPHTLDLASIVE 526 >gi|239928164|ref|ZP_04685117.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291436494|ref|ZP_06575884.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291339389|gb|EFE66345.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 549 Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 196/517 (37%), Positives = 278/517 (53%), Gaps = 18/517 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVVHK---ELELLGEYVLSCTAQELARMANYN 80 NQ P + + + +D L + P V + EL LG S QE A+ + Sbjct: 10 NQAPPLVQYDVFGADRALAEAVGRHLGPEVRDEALAELSGLGRTAGSAQVQEWGVQADEH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+V+FHPAWH LL + + GL + W R H RAA Sbjct: 70 PPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGL-TAAWGRP-------GGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG S+T A++ AL T P + +W P + S YD T + K V G+ Sbjct: 122 LMWTQVEAGTCCPLSMTHAAVPALRTDPALATEWEPLLTSVIYDRTLRPAHLKPGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + ++ DG Y L+GHKWF S+PMSDAF++LAQ G + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTTARPLAEDGAYELTGHKWFCSAPMSDAFLVLAQAPGGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ V M LD Sbjct: 242 RVLADGTRNVFLLQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTVIGMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S MR ++A+A+H+ R GG L+D+P+M+ +AD+AL+ AATAL RLA + Sbjct: 302 CVLGSAGLMRQAVAQAVHHCTYREAFGGKLVDKPLMRNVLADLALESEAATALGLRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D+ +E A RI P KYW K P V EA EC+GG+GY+EE + R RESP Sbjct: 362 YDDGG--EQERALLRIAVPAAKYWVTKRCPPVAVEAAECLGGNGYVEESGLPRLVRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI G+GN LDVL L + + + Q G+ + I L ++ + Sbjct: 420 NSIWEGAGNVQALDVLRALRREPAALDAYLREVGQARGADHRLDGAIKDLLTELADLEGV 479 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +G AR L E++AL + L R +AD F R Sbjct: 480 EGRARRLVERLALVLQGSLLVRFAPPQVADAFCAARL 516 >gi|157147847|ref|YP_001455166.1| isovaleryl CoA dehydrogenase [Citrobacter koseri ATCC BAA-895] gi|157085052|gb|ABV14730.1| hypothetical protein CKO_03651 [Citrobacter koseri ATCC BAA-895] Length = 550 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 193/521 (37%), Positives = 288/521 (55%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQ 71 N +H + ++F NQP N + SD L +A + +L +G+ + + + Sbjct: 9 NTMHWQTHTVF--NQPAPLNNSNLFLSDGALCEAVAREGAGWDSDLLASIGQQLGTAESL 66 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN P+L Y P G+R D V FHPAWH L++ + +H W+ + R+ Sbjct: 67 ELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEEN----ARQG 122 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P DW + S YD Sbjct: 123 AFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPSPFHDWLTPLRSDRYDSHLLPG 182 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG + L GHKWF S P SDA ++LAQ + Sbjct: 183 GQKRGLLIGMGMTEKQGGSDVLSNTTRAERLDDGAWRLVGHKWFFSVPQSDAHLVLAQTK 242 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG NG+ +RLK+K+GNRSNA+ E+EF + G+LLG+ + Sbjct: 243 GGLSCFFVPRFLPDGQRNGVRLERLKDKLGNRSNASCEVEFQDAVGWLLGEEGEGIRHIL 302 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S S MR + + AI++A +R V G LIDQP+M++ ++ +AL + T Sbjct: 303 KMGGMTRFDCALGSHSMMRRAFSVAIYHAHQRQVFGKSLIDQPMMRQVLSRMALQLEGQT 362 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D + +EA AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 363 ALLFRLARAWDR-RGDPKEALRARLFTPAAKFAICKSGIPFVAEAMEVLGGVGYCEESEL 421 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K T ++E L + G + + Sbjct: 422 PRLYREMPVNSIWEGSGNVMCLDVLRVLSKQTGVYELLNEAFAEVKGQDRHYDRAVRQLQ 481 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K D+ R +T+++ L A + R +A + + Sbjct: 482 QRLRKPDEAQGREITQQLFLLGCGAQMLRYASPPLAQAWCQ 522 >gi|167561138|ref|ZP_02354054.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis EO147] Length = 559 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 208/549 (37%), Positives = 304/549 (55%), Gaps = 20/549 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + + H+ L G + + A LA +AN + P+L Sbjct: 14 NQAPPLHDYNAFETDAALVGAVERYDASWHQTALARDGAALTTLDALALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL +GLH + +P R A R A +L A Sbjct: 74 STHSPRGERIDALEFHPSWHRLLALLRGEGLHALPFS---DP--RPGAMVARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + + K++SRE+D + +K S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPSLFETLREKLYSREHDARDAPLPEKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + +Q + G Y L GHKWF S+P DA ++LA+ G G F V Sbjct: 189 KQGGSDVRSNETQAYPLGAGGRGESYRLVGHKWFFSAPQCDAHLVLARTAGHAGISSFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AATAL RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ + LF+ S + L +SL Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFAEWRDAAKHSAPLADALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLHGRFN 550 E + AR + ++IAL + A+ L R G +A+ F+ RF D T + L F+ Sbjct: 489 PEQREACARRIAQRIALVAQASLLLRDGPPAVAEAFVATRFGDASSETGRVYGTLPATFD 548 Query: 551 AAHIIDSLY 559 A +I+ + Sbjct: 549 HAALIERAF 557 >gi|302867552|ref|YP_003836189.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302570411|gb|ADL46613.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 542 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 195/535 (36%), Positives = 286/535 (53%), Gaps = 9/535 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +NQ P +G + +L + L LG A E R+AN + P L Sbjct: 7 VNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEHPPVL 66 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHP+WH L+R ++ GLH + W R AH RAA YL Sbjct: 67 RTHDRYGNRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGFYLW- 120 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 + +AGH S+T A++ AL +P + + P + +REYD + P K + G+ +TE Sbjct: 121 RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYDFGLRPPQTKRGLLAGMSMTE 180 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+ + DG Y L GHKWF S+PM D F+ LAQ G + CFLVPR+L D Sbjct: 181 KQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPD 240 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + RLK+K+GNRSNA+ E+E+ + + +GD + DM L LD I + Sbjct: 241 GTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDCVIGA 300 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383 +GMR + A+H+A R G L DQP+M+ +AD+A++ AAT L RLA + D A Sbjct: 301 AAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGATDRSA 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A+ R+ + KYW CK P AEA+EC+GG+GY+EE + R +RESP NSI Sbjct: 361 RGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIW 420 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LDVL L + + + + G+ + + +RD ++ + + A Sbjct: 421 EGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADVRLDAAVRRVRDELADHTDLELRA 480 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + E++AL + L R G +AD F +R + + L G + A IID Sbjct: 481 RRVVERLALVLQGSLLVRHGHPAVADAFCASRLDGDHGQAYGTLPGGLDLAAIID 535 >gi|328880608|emb|CCA53847.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 557 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 200/513 (38%), Positives = 285/513 (55%), Gaps = 10/513 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P +G + LL + +L +G S Q A AN + P+L Sbjct: 22 NQAPPLVGHDVAEDPVLLEGVRREGAEWYLDDLHRIGRRTGSEEVQRWADEANRHEPELR 81 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHPA+H+L+ +I +GL + W R H RAA + + Sbjct: 82 THDRYGNRVDEVDFHPAYHSLMDVAISEGLAGAPWADD-----RPGVHVARAAGFMVWSS 136 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 EAGH S+T A + AL +P + + P + SR YDP +AP K + G+G+TEK Sbjct: 137 AEAGHGCPVSMTYAVVPALRNSPGLAAAYEPLLTSRVYDPGLRAPGAKRGLLAGMGMTEK 196 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GGTD+ A T+ SDG + L GHKWF S+PM+D F++LAQ G + CFLVPR+L DG Sbjct: 197 QGGTDVRANTTTAVAASDGSWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPDG 256 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N QRLK+K+GNRSNA+ E EF +T G+L+G+ + DM + LD + S Sbjct: 257 ARNTFRIQRLKDKLGNRSNASSEPEFDDTVGWLVGEEGKGVRTIIDMVTMTRLDCVLGSA 316 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384 SG R +LA+A H+AR R V G L+DQP+M+ +AD+AL+ AAT L+ R+A + D A + Sbjct: 317 SGTRAALAQAAHHARYRSVFGARLVDQPLMRNVLADLALESEAATTLALRIAGATDRAQR 376 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + E A+ R+ + KYW CK PA +AEA+EC+GG+GY E + R YRE+P N I Sbjct: 377 GDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIWE 436 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK--EDKGL-A 501 GSGN LDVL L + E + +E G + ++ T R+ + ED L A Sbjct: 437 GSGNVNALDVLRALVREPESLEAFRAEVEA-AGGADARLDTAWREVLGELTRPEDAELRA 495 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R L E++AL + L R +AD F +R Sbjct: 496 RRLVERLALVLQGSLLVRHAPAAVADAFCASRL 528 >gi|118616537|ref|YP_904869.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99] gi|118568647|gb|ABL03398.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99] Length = 553 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 193/530 (36%), Positives = 283/530 (53%), Gaps = 9/530 (1%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67 R L + + SD+ NQ PL N +S L+ ALI +E+ LG S Sbjct: 2 RLLEKCNIDRMSDTHVVTNQVPLLENHNPATSPMLVEALIREGGQWGLEEVSELGAISGS 61 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 AQ +A+ N P LH + G R D+VEF PA+H L+R +I GLH + W Sbjct: 62 AQAQRWGELADRNRPILHTHDRVGHRIDEVEFDPAYHELMRTAIGHGLHAAPWADD---- 117 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187 R AH +RAA+ + +E GH+ S+T A + AL P + + P + SREYDP Sbjct: 118 -RPGAHVVRAAKTSVWT-VEPGHICPISMTYAVVPALRYNPELAAVYEPLLTSREYDPEL 175 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 + K + G+ +TEK+GG+D+ A T+Q SDG Y L+GHKWF S+PM D F++LA Sbjct: 176 RLASTKPGITAGMSMTEKQGGSDVRAGTTQATPNSDGTYRLTGHKWFTSAPMCDIFLVLA 235 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 Q G + CF++P +L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ Sbjct: 236 QAPGGLSCFMLPHILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVP 295 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +M L LD + S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ Sbjct: 296 TIIEMVNLTRLDCTLGSATSMRSGLTRAMHHAQHRKAFGAYLIDQPLMRNVLADLAVEAE 355 Query: 368 AATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAT ++ R+A + D+A + EA + I +KYW CK + AEA+EC+GG+GY+E Sbjct: 356 AATTVAMRMAGATDKAVRGDQTEALFRGIGLAASKYWVCKRSTPHAAEALECLGGNGYVE 415 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV--I 484 E + R YRE+P I GSGN LD L + E LF L G ++ + Sbjct: 416 ESGMPRLYREAPLMGIWEGSGNVSALDTLRAMATKPECVEVLFDELAHSAGQDARQDNHV 475 Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 LR + + AR + E I LA + L R G + + FL R Sbjct: 476 EGLRRQLGDLETIGYRARKIAEDICLALQGSLLIRHGHPAVTEAFLATRI 525 >gi|296168517|ref|ZP_06850333.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896695|gb|EFG76332.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 545 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 192/520 (36%), Positives = 280/520 (53%), Gaps = 11/520 (2%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N +S L+ ALI +E+ +G AQ +A+ Sbjct: 5 SDTHVVTNQAPPLENYNPATSAVLVEALIREGGEWGLEEVNEVGAIAAGHEAQRWGELAD 64 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I G+H + W R AH +RAA Sbjct: 65 RNRPVLHTHDRYGHRVDEVEYDPAYHELMRTAIAHGIHAAPWADE-----RPGAHVVRAA 119 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 ++ + +E GH S+T A + AL P + + P + SREYDP + K + Sbjct: 120 KMSVW-NVEPGHTCPISMTYAVVPALRYNPELAAVYEPLLTSREYDPELRLATTKRGITA 178 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CFL+ Sbjct: 179 GMSMTEKQGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 238 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DGS N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 239 PRILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEQGRGVPTIIEMVNLTRL 298 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR L AIH+ + R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 299 DCTLGSATSMRTGLTRAIHHTQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 358 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D+A + EA RI +KYW CK A AEA+EC+GG+GY+E+ + R +RE+ Sbjct: 359 ATDKALRGDGREALLRRIGLAASKYWVCKRATPHAAEALECLGGNGYVEDSGMPRLFREA 418 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISLC 494 P I GSGN LD L + E LF+ + + G+ G V + RD L Sbjct: 419 PLMGIWEGSGNVSALDTLRAMATRPECIEVLFAEVAEGAGADPRLGGHVERLRRDLTDLD 478 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I LA A L R G +A+ FL R Sbjct: 479 TITQ-RARKVAEDICLALQGALLVRHGHPAVAEAFLTTRL 517 >gi|152985275|ref|YP_001346522.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150960433|gb|ABR82458.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 549 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 200/529 (37%), Positives = 290/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N A QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVAMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAVALQAKLLLEAGNSVVSDAFIGSRLGDG 524 >gi|296387501|ref|ZP_06876976.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 549 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 290/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G+N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGVNLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|229592776|ref|YP_002874895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] gi|229364642|emb|CAY52560.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] Length = 559 Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 200/533 (37%), Positives = 285/533 (53%), Gaps = 14/533 (2%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66 RR MN +HQ +++ NQPP G N Y D L F + H ++ G + Sbjct: 5 RRPVMN-LHQFAETHDVTNQPPSLDGTNLYRIDLPLQEWSRRFGAGWAHARIDAYGA-LA 62 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 E +AN N P ++ G R D VEFHPA+H L+R ++ GL W Sbjct: 63 GGPLMEAGFLANQNKPVFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWAHP--- 119 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 + AH RAA YL +Q EAG ++T A + AL P + K W PKI S +YDP Sbjct: 120 --QSGAHVARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTDYDPR 177 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA 242 N K IG+ +TEK+GGTD+ A T++ + G Y L GHKWF S+PM DA Sbjct: 178 NVGIAHKAGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDA 237 Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 F+ LAQ + + CFL+PR + N QRLKNK+GN SNA+ E+EF +++G+ Sbjct: 238 FLTLAQTDKGLTCFLLPRHRPGDTRNEFYIQRLKNKLGNCSNASSEVEFRGALAWMIGEE 297 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+ Sbjct: 298 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQASHHCAHRSVGGRVLSEQPLMQNVLADL 357 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL+ AA ALS R+ + D +EA ++R++ + KYW CK APA+I EA EC+GG+ Sbjct: 358 ALESEAALALSLRMGRALDHLGD-EQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGA 416 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS-GK 481 GY+E+ + R YRE+P NS GSGN LDVL L K + E LF L G Sbjct: 417 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRLLA 476 Query: 482 KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + I L+ + ++ + AR LTE IA+A A L AG+ ++D F+ +R Sbjct: 477 RHIEQLKSAFMDTQDMQYRARQLTEDIAVALQAKLLLEAGIAAVSDGFIASRL 529 >gi|311696230|gb|ADP99103.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 566 Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 184/517 (35%), Positives = 281/517 (54%), Gaps = 13/517 (2%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQPP N + D +L A + ++L+ G + +L AN N P Sbjct: 27 FNQPPALENYNLFEQDIALQEAALREGAGKAAEDLKAFGALAGAAQTIDLGFRANANKPV 86 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + + G R D+V+FHPA+H L+R + +GLH S W + AH RAA+ Y+ Sbjct: 87 FNTHDRFGHRIDEVDFHPAYHELMRIAFDNGLHSSPWSHPGQ-----GAHVARAAKYYMH 141 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EA H ++T A++ ++ P + DW +I + YDP N QK+SV IG+ +T Sbjct: 142 SQVEAAHCCPVTMTFAAIPSIRKQPELAADWEARILADSYDPRNLPDSQKSSVTIGMAMT 201 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A +++ I G Y L GHKWF+S+PM DAF++LAQ + + CFL+P Sbjct: 202 EKQGGSDVRANSTRAYPIGAGGPGQAYELVGHKWFVSAPMCDAFLVLAQTQSGLSCFLMP 261 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N QRLKNK+GN +NA+ E E +++G+ + +M + D Sbjct: 262 RWRPDGTKNPWQVQRLKNKMGNVANASSEAELRGALAWMVGEEGRGVPTIIEMVAMTRFD 321 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S +GMR ++A+A H+ R R G LIDQP+M+ +AD+AL+ AA A + R+A + Sbjct: 322 CMIGSSAGMRQAIAQASHHCRHRSAFGARLIDQPLMQNVLADLALESEAALAYTMRIARA 381 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + + E AR+ P+ KYW CK P EAMECIGGSG +E+ + R +RESP Sbjct: 382 LDN-QDKEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLFRESPV 440 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 N+I GSGN LD L L+K + F+ + G+ + + + L+ + + Sbjct: 441 NAIWEGSGNVQCLDTLRALQKEPETLDAFFNEAAEAKGADRRFDQFLAQLQHDFADISDF 500 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L +++ALA + L R +AD F +R Sbjct: 501 QYRARNLVDRMALALQGSLLLRHSDAAVADAFCASRL 537 >gi|126433611|ref|YP_001069302.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126233411|gb|ABN96811.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 551 Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 194/512 (37%), Positives = 273/512 (53%), Gaps = 9/512 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ PL N +S L ALI E+ LG S AQ +A+ N P LH Sbjct: 18 NQVPLLEDHNPAASPVLTEALIREGGEWGLDEVAELGALSGSAQAQRWGELADRNRPVLH 77 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+ PA+H+L+ ++ GLH + W R AH +RAA+ + Sbjct: 78 THDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKTSVWTP 132 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 E GH+ S+T A + AL P + + P + SR YDP K P K + G+ +TEK Sbjct: 133 -EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGMSMTEK 191 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CF +PR+L DG Sbjct: 192 QGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD + S Sbjct: 252 TRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384 + MR L AIH+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A + D A + Sbjct: 312 TSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVR 371 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 S EA RI KYW CK A AEAMEC+GG+GY+E+ + R YRE+P I Sbjct: 372 GDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + E LF L Q G + + LR ++ + AR Sbjct: 432 GSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRPALDDLATVQYRAR 491 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + E I LA A L R G +A+ FL R Sbjct: 492 KVAEDICLALQGALLVRHGHPAVAEAFLATRL 523 >gi|15607812|ref|NP_215186.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium tuberculosis H37Rv] gi|15840075|ref|NP_335112.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31791856|ref|NP_854349.1| acyl-CoA dehydrogenase FADE8 [Mycobacterium bovis AF2122/97] gi|121636593|ref|YP_976816.1| putative acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660447|ref|YP_001281970.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra] gi|148821877|ref|YP_001286631.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11] gi|215410226|ref|ZP_03419034.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 94_M4241A] gi|215425912|ref|ZP_03423831.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92] gi|215429511|ref|ZP_03427430.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054] gi|215444795|ref|ZP_03431547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T85] gi|218752323|ref|ZP_03531119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503] gi|219556519|ref|ZP_03535595.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17] gi|224989065|ref|YP_002643752.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797614|ref|YP_003030615.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435] gi|254230997|ref|ZP_04924324.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C] gi|254363621|ref|ZP_04979667.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str. Haarlem] gi|254549632|ref|ZP_05140079.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260199681|ref|ZP_05767172.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46] gi|260203843|ref|ZP_05771334.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85] gi|289442071|ref|ZP_06431815.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46] gi|289552928|ref|ZP_06442138.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605] gi|289568613|ref|ZP_06448840.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17] gi|289573278|ref|ZP_06453505.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85] gi|289749177|ref|ZP_06508555.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92] gi|289752720|ref|ZP_06512098.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054] gi|289756760|ref|ZP_06516138.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85] gi|289760798|ref|ZP_06520176.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503] gi|294993022|ref|ZP_06798713.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 210] gi|297633170|ref|ZP_06950950.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207] gi|297730150|ref|ZP_06959268.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN R506] gi|298524164|ref|ZP_07011573.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774782|ref|ZP_07413119.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001] gi|306781485|ref|ZP_07419822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002] gi|306783322|ref|ZP_07421644.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003] gi|306787692|ref|ZP_07426014.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004] gi|306794458|ref|ZP_07432760.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005] gi|306796426|ref|ZP_07434728.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006] gi|306802285|ref|ZP_07438953.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008] gi|306806495|ref|ZP_07443163.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007] gi|306966693|ref|ZP_07479354.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009] gi|306970886|ref|ZP_07483547.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010] gi|307078614|ref|ZP_07487784.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011] gi|307083178|ref|ZP_07492291.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012] gi|313657477|ref|ZP_07814357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN V2475] gi|3261533|emb|CAA17469.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE8 [Mycobacterium tuberculosis H37Rv] gi|13880223|gb|AAK44926.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31617443|emb|CAD93553.1| PROBABLE ACYL-COA DEHYDROGENASE FADE8 [Mycobacterium bovis AF2122/97] gi|121492240|emb|CAL70707.1| Probable acyl-CoA dehydrogenase fadE8 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600056|gb|EAY59066.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis C] gi|134149135|gb|EBA41180.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis str. Haarlem] gi|148504599|gb|ABQ72408.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis H37Ra] gi|148720404|gb|ABR05029.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis F11] gi|224772178|dbj|BAH24984.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319117|gb|ACT23720.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 1435] gi|289414990|gb|EFD12230.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T46] gi|289437560|gb|EFD20053.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 605] gi|289537709|gb|EFD42287.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis K85] gi|289542367|gb|EFD46015.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T17] gi|289689764|gb|EFD57193.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis T92] gi|289693307|gb|EFD60736.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis EAS054] gi|289708304|gb|EFD72320.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis GM 1503] gi|289712324|gb|EFD76336.1| acyl-CoA dehydrogenase FadE8 [Mycobacterium tuberculosis T85] gi|298493958|gb|EFI29252.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216675|gb|EFO76074.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu001] gi|308325783|gb|EFP14634.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu002] gi|308331818|gb|EFP20669.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu003] gi|308335604|gb|EFP24455.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu004] gi|308337221|gb|EFP26072.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu005] gi|308343087|gb|EFP31938.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu006] gi|308346971|gb|EFP35822.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu007] gi|308350951|gb|EFP39802.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu008] gi|308355547|gb|EFP44398.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu009] gi|308359506|gb|EFP48357.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu010] gi|308363410|gb|EFP52261.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu011] gi|308367048|gb|EFP55899.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis SUMu012] gi|323720896|gb|EGB29962.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CDC1551A] gi|326905106|gb|EGE52039.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis W-148] gi|328457395|gb|AEB02818.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis KZN 4207] Length = 542 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 192/519 (36%), Positives = 277/519 (53%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N SS L+ ALI E+ +G SC AQ +A+ Sbjct: 2 SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I G+H + W R AH +RAA Sbjct: 62 RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL + + P + SREYDP K K + Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q +DG Y L+GHKWF S+PM D F++LAQ + CFL+ Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D A + EA RI KYW CK + A AEA+EC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF L + G + + LR + Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E I LA + L R G +A+ FL R Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 514 >gi|315506048|ref|YP_004084935.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315412667|gb|ADU10784.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 542 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 196/535 (36%), Positives = 286/535 (53%), Gaps = 9/535 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +NQ P +G + +L + L LG A E R+AN + P L Sbjct: 7 VNQVPPMVGHDTADDPALRDGVAREGAGWALPGLHELGRLAGGEEAAEHGRLANEHPPVL 66 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHP+WH L+R ++ GLH + W R AH RAA YL Sbjct: 67 RTHDRYGHRIDEVEFHPSWHELMRTAVGHGLHAAPWADD-----RPGAHVARAAGFYLW- 120 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 + +AGH S+T A++ AL +P + + P + +REY + P K + G+ +TE Sbjct: 121 RPDAGHGCPISMTYAAVPALRHSPDLAARYEPLLTTREYHFGLRPPQTKRGLLAGMSMTE 180 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+ + DG Y L GHKWF S+PM D F+ LAQ G + CFLVPR+L D Sbjct: 181 KQGGSDVRANTTTARPEPDGSYRLVGHKWFTSAPMCDLFLTLAQAPGGLTCFLVPRVLPD 240 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + RLK+K+GNRSNA+ E+E+ + + +GD + DM L LD I + Sbjct: 241 GTRNPMRLMRLKDKLGNRSNASAEVEYEHAVAWRVGDEGRGVRTIIDMVNLTRLDCVIGA 300 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383 +GMR + A+H+A R G L DQP+M+ +AD+A++ AAT L RLA + D A Sbjct: 301 AAGMRHGVTTAVHHATHRRAFGDYLADQPLMRNVLADLAVESEAATVLMVRLAGATDRSA 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A+ R+ + KYW CK P AEA+EC+GG+GY+EE + R +RESP NSI Sbjct: 361 RGDDGETAFKRLALAVGKYWVCKRWPGHAAEALECLGGNGYVEESGMPRLFRESPLNSIW 420 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCKEDKGLA 501 GSGN LDVL L + + + + G+ + + +RD ++ + + A Sbjct: 421 EGSGNVAALDVLRALTREPQVLAAYEAEVAAAAGADARLDAAVRRVRDELADHTDLELRA 480 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + E++AL A L R G +ADVF +R + + L G + A IID Sbjct: 481 RRVVERLALVLQGALLVRHGHPAVADVFCASRLDGDHGQAYGTLPGGLDLAAIID 535 >gi|108797948|ref|YP_638145.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119867045|ref|YP_936997.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108768367|gb|ABG07089.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119693134|gb|ABL90207.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 551 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 194/512 (37%), Positives = 273/512 (53%), Gaps = 9/512 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ PL N +S L ALI E+ LG S AQ +A+ N P LH Sbjct: 18 NQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRNRPVLH 77 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+ PA+H+L+ ++ GLH + W R AH +RAA+ + Sbjct: 78 THDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADD-----RAGAHVVRAAKTSVWTP 132 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 E GH+ S+T A + AL P + + P + SR YDP K P K + G+ +TEK Sbjct: 133 -EPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKAGITAGMSMTEK 191 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CF +PR+L DG Sbjct: 192 QGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD + S Sbjct: 252 TRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384 + MR L AIH+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A + D A + Sbjct: 312 TSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVR 371 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 S EA RI KYW CK A AEAMEC+GG+GY+E+ + R YRE+P I Sbjct: 372 GDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + E LF L Q G + + LR ++ + AR Sbjct: 432 GSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSALDDLATVQYRAR 491 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + E I LA A L R G +A+ FL R Sbjct: 492 KVAEDICLALQGALLVRHGHPAVAEAFLATRL 523 >gi|167835047|ref|ZP_02461930.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis MSMB43] Length = 559 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 200/521 (38%), Positives = 289/521 (55%), Gaps = 17/521 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + + H+ L G + + A LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVDAVRRYDASWHQTALSRDGAALTTPDALALAELANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL +GLH + EP + A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQHEPALFATLRDKLYAREHDARDVPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + Y L GHKWF S+P DA ++LA+ GR G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAAGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGRAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DG N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGGKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L +QP+M+ +AD+AL+ AATAL RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLALESEAATALFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALFDEWRDAARYSAPLADALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 E + AR + ++IAL + A+ L R G +A F+ RF Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPAAVAQAFVATRF 529 >gi|254236865|ref|ZP_04930188.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719] gi|126168796|gb|EAZ54307.1| hypothetical protein PACG_02885 [Pseudomonas aeruginosa C3719] Length = 549 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 289/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LTGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|15599167|ref|NP_252661.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107103490|ref|ZP_01367408.1| hypothetical protein PaerPA_01004560 [Pseudomonas aeruginosa PACS2] gi|9950162|gb|AAG07359.1|AE004815_3 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] Length = 549 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 289/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|76808825|ref|YP_331824.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|167843843|ref|ZP_02469351.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|167909057|ref|ZP_02496148.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 112] gi|254188119|ref|ZP_04894631.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254258181|ref|ZP_04949235.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] gi|76578278|gb|ABA47753.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|157935799|gb|EDO91469.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254216870|gb|EET06254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] Length = 559 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTAPDVLALAELANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|237810404|ref|YP_002894855.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] gi|237505559|gb|ACQ97877.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] Length = 559 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRQYGASWRQTALSHDGAALTTPDVLALAELANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|134283582|ref|ZP_01770281.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|134244991|gb|EBA45086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] Length = 559 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALAELANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPFTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|266631113|emb|CBH32113.1| putative acyl-CoA dehydrogenase [Streptomyces albaduncus] Length = 545 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 202/513 (39%), Positives = 287/513 (55%), Gaps = 10/513 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G + + D +L+ + + H +L LG S AQ A AN + P+L Sbjct: 13 NQPPPLTGHDT-ADDPVLLEGVHREGAAWHLDDLHRLGRLAGSEEAQGWADQANRHEPEL 71 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V+FHPA+H+L+ S+ G+ + W R AH RAA L Sbjct: 72 RTHDRYGHRVDEVDFHPAYHSLMDVSVSAGIAGAAWTDE-----RPGAHVARAASFMLAT 126 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 LE GHL S+T A + AL P + K + P + SR YDP + P K + G+G+TE Sbjct: 127 MLEPGHLCPVSMTYAVVPALRHAPDLAKTYEPLLTSRVYDPGLRVPAGKRGLLAGMGMTE 186 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GGTD+ A T+ + +DG + L GHKWF S+PM+D F++LAQ G + CFLVPR+L D Sbjct: 187 KQGGTDVRANTTAATEQADGRWRLRGHKWFTSAPMNDLFLVLAQAPGGLSCFLVPRVLPD 246 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK+K+GNRSNA+ E EF +T +L+GD + DM + LD + S Sbjct: 247 GSRNTFRIQRLKDKLGNRSNASSEPEFDDTVAWLVGDEGKGVRTIIDMVTMTRLDCVLGS 306 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +G R +LA+A H+AR R V G LIDQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 307 AAGTRAALAQAAHHARHRSVFGAELIDQPLMRNVLADLALESEAATTLALRLAGAADRAQ 366 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + E A+ R+ + KYW CK PA +AEA+EC+GG+GY E + R YRE+P N I Sbjct: 367 RGDAGERAFLRLATAVGKYWVCKRQPAAVAEALECLGGNGYDEASGMPRLYREAPLNGIW 426 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LD+L L + E + +E G+ + L+ + L ++ A Sbjct: 427 EGSGNVNALDMLRALTREPESLEAYRAEVEPAAGADRRLDAAWRELQGELVLTEDASLRA 486 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E+ AL + L R +AD F +R Sbjct: 487 RRVIERAALVLQGSLLVRHAPAPVADAFCASRL 519 >gi|313109412|ref|ZP_07795372.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310881874|gb|EFQ40468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 549 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNAAVSDAFIGSRLGDG 524 >gi|217424949|ref|ZP_03456445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|217391969|gb|EEC31995.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] Length = 559 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|254393001|ref|ZP_05008165.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197706652|gb|EDY52464.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 552 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80 NQ P +G + +++D L A+ + P+ G S AQE +AN Sbjct: 18 NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 77 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 78 PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGR-------PSGHVRRAAGF 129 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P++ + YD T P K G+ Sbjct: 130 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 189 Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 190 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 249 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 250 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 309 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR ++A AIH+ R GG+LID+P+M+ +AD+AL+ AATAL RLA + Sbjct: 310 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 369 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D E A+ARI P KYW K AEA+EC+GG+GY+EE + R RE+P Sbjct: 370 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 427 Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493 NSI GSGN LDVL L++ N F Q L + L + K ++T L D + Sbjct: 428 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 487 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 488 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 524 >gi|70732730|ref|YP_262493.1| hypothetical protein PFL_5425 [Pseudomonas fluorescens Pf-5] gi|68347029|gb|AAY94635.1| fadE8 [Pseudomonas fluorescens Pf-5] Length = 550 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 199/532 (37%), Positives = 286/532 (53%), Gaps = 25/532 (4%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCT 69 +HQ +++ NQPP G N Y D L + F S V L G ++ Sbjct: 3 LHQFAETHEVTNQPPALDGANLYRIDLPLQQWMRRFDAGWAESRVDAYGALAGGPLM--- 59 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 E +AN N P ++ G R D VEFHPA+H L++ +I GL W +P + Sbjct: 60 --EAGFLANQNKPVFSSHDRFGHRIDLVEFHPAYHQLMQAAIEAGLTSLPWT---DP--Q 112 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 AH RA+ YL +Q EAG ++T A + AL P + W PKI + YDP N Sbjct: 113 AGAHVARASMTYLHSQAEAGSGCPLTMTFACVPALKLQPDIADQWLPKILATRYDPRNVG 172 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIM 245 K + IG+ +TEK+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ Sbjct: 173 MQHKAGLTIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLT 232 Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 LAQ + + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ Sbjct: 233 LAQTDKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNLSNASSEVEFRGALAWMIGEEGRG 292 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +M + D + S S MR +L +A H+ R V G +L +QP+M+ +AD+AL+ Sbjct: 293 VPTIIEMVAMTRFDCMVGSSSLMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALE 352 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA ALS R+ + D ++EA ++R++ + KYW CK APA+I EA EC+GG+GY+ Sbjct: 353 SEAALALSMRMGRALDHLDD-AQEAKFSRLVTAVGKYWICKRAPAMINEAAECMGGAGYV 411 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-- 483 E+ + R YRE+P NS GSGN LDVL L K + + LF+ L G K++ Sbjct: 412 EDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGN--GHGDKRLAA 469 Query: 484 -ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 I L++S + + AR LTE IAL A L AG ++D F+ +R Sbjct: 470 HINGLKESFKDTGDIQYRARQLTEDIALGLQAKLLLEAGNQVVSDAFIASRL 521 >gi|326382864|ref|ZP_08204554.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326198454|gb|EGD55638.1| isovaleryl CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 540 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 191/523 (36%), Positives = 283/523 (54%), Gaps = 16/523 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P + +N Y+S + LV + + + L G V Q A +AN TP+ Sbjct: 8 FNQAPQRVDVNEYTSHTALVEAVGVYGGGWATDALTEAGALVGRADFQRDAELANAITPK 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + G R D +EFHPA+H ++ +I G H S W +P R AH RAA Sbjct: 68 LHTHDRWGNRIDDIEFHPAYHRIIGDAIAHGAHTSCWS---DP--RDGAHVARAAMFMQF 122 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q+E GH S+T A + +L ++ + W P++FS +Y + QKTS G+ +T Sbjct: 123 GQIEPGHACPVSMTHAVVPSLRVDEKLAEQWLPRVFSNDYQ-HDLGSGQKTSAIFGMAMT 181 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GG+D+ A T++ + SDG Y ++GHKWF S+P SDAF++LA+ + V CF+VPR+L Sbjct: 182 EKQGGSDVRANTTRAVEQSDGTYLITGHKWFCSAPQSDAFLVLAKTDPGVTCFVVPRVLP 241 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG+ N QRLK+K+GN+SNA+ E+EF T G+ LGD + +M LD + Sbjct: 242 DGTRNVFNVQRLKDKLGNKSNASSEVEFDRTVGWRLGDEGAGVRTIIEMVNQTRLDCILG 301 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S +GMR S+AEA + R R G LIDQP M +AD+ ++ AA + RLA+++D+ Sbjct: 302 SAAGMRQSVAEAAWHVRNRAAFGATLIDQPAMTAVVADLQVEAEAAIWTAMRLASAYDD- 360 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-SIARHYRESPANSI 442 E AA+ R+ + KYW CK P EA+EC+GG+GY E ++R YRE P ++ Sbjct: 361 -DAEESAAFRRLATAVGKYWVCKRGPNHAYEALECLGGNGYCENGFPLSRRYREQPVMAV 419 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKE 496 GSGN + LDVL + + E + + E+ LG +K ++ + + Sbjct: 420 WEGSGNVIALDVLRAMMRDPMSVEAVDNEFERGLGVYREYDLHVEKTRKLIAQAAADPNA 479 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539 LAR LTE +A+A + L R + D F+ R D H Sbjct: 480 APALARRLTESMAIALQGSILIRQAPESVTDAFIAGRIADPGH 522 >gi|170696029|ref|ZP_02887166.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170139021|gb|EDT07212.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 569 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 208/577 (36%), Positives = 312/577 (54%), Gaps = 36/577 (6%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVL 66 +R + Q H+ + NQ P N +S+D+ L A + + H++ L G + Sbjct: 2 QRHSFGQTHEVT------NQVPPLADYNLFSTDAALSAALERDGAAWHRDALLRHGAALT 55 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 + LA +AN +TP+L + P GER D +EFHPAWH LL +GLH + +P Sbjct: 56 TPETLALAELANRHTPELSTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP 112 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 R A R A +L AQ+E+G L ++T AS+ L P++ + K+++R +DP Sbjct: 113 --RPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFETLRDKLYARGHDPR 170 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242 + QK S IG+G+TEK+GG+D+ + +Q + I+ G Y L GHKWF S+P DA Sbjct: 171 DVPLAQKASAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELVGHKWFFSAPQCDA 230 Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 ++LA+ VG CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + FG ++G Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 D + +M LD I S + MR +L +AIH+AR R G L+DQP+M+ +A Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRNLVDQPLMRNVLA 350 Query: 361 DIALDIAAATALSFRLANSFDEAKS------------RSEEAAYARIMAPITKYWCCKMA 408 D+AL+ AATAL RLA +F+++ S E A+ RI+ P KYW CK A Sbjct: 351 DLALESEAATALFMRLAQAFEQSADAGTATSAADSAAASAERAWRRIVTPAAKYWVCKRA 410 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 EAME GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + + L Sbjct: 411 LEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQAL 470 Query: 469 FSTLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 F+ + D + + + + +L + + AR + ++I L + A L R + Sbjct: 471 FAQWQADAAAHPALSAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVRHSPAVV 530 Query: 526 ADVFLENRFLDNCHST---HCMLHGRFNAAHIIDSLY 559 A+ F+ R D C + + L F+ A I++ + Sbjct: 531 AEAFIATRLADGCGESGRVYGTLPATFDHAAIVERAF 567 >gi|260185554|ref|ZP_05763028.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A] gi|289446231|ref|ZP_06435975.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A] gi|289419189|gb|EFD16390.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis CPHL_A] Length = 542 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 277/519 (53%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N SS L+ ALI E+ +G SC AQ +A+ Sbjct: 2 SDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I G+H + W R AH +RAA Sbjct: 62 RNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADD-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL + + P + SREYDP K K + Sbjct: 117 KTSVWT-VEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q +DG Y L+GHKWF S+PM D F++LAQ + CFL+ Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLL 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAG 355 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D A + EA RI KYW CK + A AEA+EC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF L + G + + LR + Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLD 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E I LA + L R G +A+ FL + Sbjct: 476 TIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATQL 514 >gi|312200505|ref|YP_004020566.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311231841|gb|ADP84696.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 591 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 193/526 (36%), Positives = 279/526 (53%), Gaps = 13/526 (2%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 +P+ + NQPP + + L L + +L LG S A + Sbjct: 41 RPAVTHVVTNQPPPLVDYDVADDPVLEEGLRREGAAFYVDDLHRLGWLAGSEQAARWGDL 100 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN + P+L + G R D+V+FHP+WHAL+ ++ +GL + W R AH R Sbjct: 101 ANRHVPELRTHDRYGNRIDEVDFHPSWHALMDVAVREGLAGAAWGSR-----RPGAHVAR 155 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA L++ + +E GH S+T A + AL P + + + SR YD P K + Sbjct: 156 AAGLHVWSTVEQGHTCPVSMTYAVIPALRAEPELAAVYEKLLTSRVYDRALCPPTGKLGL 215 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+G+TEK+GG+D+ A T+ DG Y L GHKWF S+PMSD F++LAQ + CF Sbjct: 216 IAGMGMTEKQGGSDVRANTTVAVAHPDGGYRLHGHKWFTSAPMSDLFLVLAQAPSGLSCF 275 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVPR+L DGS N QRLK+K+GNRSNA+ E EF +T G+L+G + +M + Sbjct: 276 LVPRILPDGSRNTFRIQRLKDKLGNRSNASAEPEFDDTVGWLVGPEGRGVRTIIEMVAMT 335 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 DSA+ S +G R +L +A+H+AR R G +L+D+P+M+ +AD+A++ AAT L RL Sbjct: 336 RFDSALGSAAGTRAALVQAMHHARHRSAFGALLVDKPLMRNVLADLAVESEAATTLVLRL 395 Query: 377 ANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + D + + E A+ R+ + K+W CK P +AEA+EC+GG+GY EE + R YR Sbjct: 396 AGAIDRGVRGDAGERAFLRLATALAKFWICKRQPGFVAEALECLGGNGYAEESGMPRLYR 455 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR-DSIS 492 E+P NSI G+GN LDVL L + + + + G + I LR D Sbjct: 456 EAPLNSIWEGAGNVNALDVLRALGREPAAVAAFDAEVARSAGGDDRLDAAIAALRADLAG 515 Query: 493 LCKEDKGL----ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L D AR L E++AL A L R +AD F R Sbjct: 516 LPTADPSELEFGARGLVERMALVLQGALLVRHAPPAVADAFCATRL 561 >gi|167579430|ref|ZP_02372304.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis TXDOH] Length = 559 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 203/528 (38%), Positives = 288/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + A LA +AN + P+L Sbjct: 14 NQVPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDALALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL +GLH + EP + A R A YL A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYYLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K++SRE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + Y L GHKWF S+P DA ++LA+ G G CF V Sbjct: 189 KQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AATAL RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368 Query: 379 SF-DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F +EA +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ + L S + L +SL Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLAGALAELTHLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSET 536 >gi|91785604|ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91689558|gb|ABE32758.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 561 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 198/568 (34%), Positives = 303/568 (53%), Gaps = 28/568 (4%) Query: 9 RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLS 67 R + Q H+ + NQ P N +SSD+ L A + + H++ L G + + Sbjct: 3 RHSFGQTHEVT------NQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTT 56 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 LA +AN +TP+L + P GER D +EFHP+WH LL +GLH + +P Sbjct: 57 PETLALAELANRHTPELFTHSPRGERIDALEFHPSWHTLLSLLRREGLHALPFS---DP- 112 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187 ++ A R A +L AQ+E+G L ++T AS+ L P + K+++RE+DP + Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRD 171 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243 K S IG+G+TEK+GG+D+ + ++ + Y L GHKWF S+P DA Sbjct: 172 VPLTHKNSAMIGMGMTEKQGGSDVRSNQTRAYATAGSGRGAAYRLVGHKWFFSAPQCDAH 231 Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 ++L + + G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + FG ++GD Sbjct: 232 LVLGRTDDHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + +M LD I S + MR +L +AIH+AR R G L DQP+M+ +AD Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351 Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AL+ AAT L RLA +F+E A + E A+ RI+ P KYW CK A EAME Sbjct: 352 LALESEAATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + LF+ +++ Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAARALFAAWQREAQ 471 Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + + + + AR + +++ L + A L ++A+ F+ R Sbjct: 472 AHPALSAALGKLAAAFNGPAEHREASARRIAQQVVLIAQATLLLEHAPAEVAEAFIATRL 531 Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559 D C + + L F+ A I++ + Sbjct: 532 ADGCGESGRVYGTLPATFDHAAIVERAF 559 >gi|254196543|ref|ZP_04902967.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|169653286|gb|EDS85979.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] Length = 559 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 199/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + + CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAAISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREAYARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|296100949|ref|YP_003611095.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055408|gb|ADF60146.1| isovaleryl CoA dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 540 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 195/517 (37%), Positives = 283/517 (54%), Gaps = 9/517 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD L +A + EL +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPAPLSNSNLFLSDCALRDAVAREGAEWDSELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y P GER D V FHPAWH L++ + +H W E RK + Sbjct: 59 GRLANVNPPELLRYDPTGERLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARKGSF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P ++W + S YDP Q Sbjct: 115 VARAARFVLHAQVEAGTLCPVTMTFAATPLLQQALPEPFQNWLTPLLSDRYDPHLAPGAQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E EF + G+LLG+ + M Sbjct: 235 LSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQILRM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D A+ S MR +L+ A+++A +R G LIDQP+M+ ++ +AL + TAL Sbjct: 295 GGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMRDVLSRMALVLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D+ ++ +EAA+AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDK-RADPQEAAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +F+ L Q G + + Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPGMFDLLAEDFAQVKGQDRHFDRSWRQLQQK 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + R + ++ L + + + R +A + Sbjct: 474 LRKPQEAQGREIAHQLFLLGAGSQMLRHASPPVAQAW 510 >gi|294815734|ref|ZP_06774377.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294328333|gb|EFG09976.1| Putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 544 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80 NQ P +G + +++D L A+ + P+ G S AQE +AN Sbjct: 10 NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 70 PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGRP-------SGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P++ + YD T P K G+ Sbjct: 122 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 181 Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 182 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 242 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR ++A AIH+ R GG+LID+P+M+ +AD+AL+ AATAL RLA + Sbjct: 302 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D E A+ARI P KYW K AEA+EC+GG+GY+EE + R RE+P Sbjct: 362 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493 NSI GSGN LDVL L++ N F Q L + L + K ++T L D + Sbjct: 420 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 479 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 480 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 516 >gi|167822249|ref|ZP_02453720.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9] gi|167892344|ref|ZP_02479746.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 7894] gi|167900838|ref|ZP_02488043.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei NCTC 13177] gi|167917097|ref|ZP_02504188.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei BCC215] gi|226199731|ref|ZP_03795282.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|254182190|ref|ZP_04888787.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|184212728|gb|EDU09771.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|225928082|gb|EEH24118.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] Length = 559 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|256380216|ref|YP_003103876.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255924519|gb|ACU40030.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 529 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 197/533 (36%), Positives = 285/533 (53%), Gaps = 19/533 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 LNQ P G + +LL AL EL LG S QEL R+AN + P L Sbjct: 9 LNQVPPLTGHDVADDPALLTALRLGGAGWAEAELRELGVLAGSARVQELGRLANEHPPVL 68 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPAWH L+ +I GLH + W R AH RAA+ + + Sbjct: 69 RTHDRWGHRVDEVEFHPAWHELMTTAIGRGLHAAPWRDE-----RPGAHVARAAKFLVWS 123 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH S+T A++ AL +P + + P + S EYD + P K + G+ +TE Sbjct: 124 QVEAGHGCPVSMTYAAVPALRRSPWLAARFEPLLASPEYDFGLRPPESKRGLVAGMSMTE 183 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ + D + L+GHKWF S+PMSD F+ LAQ + + CFLVPR+L D Sbjct: 184 KQGGSDVRANTTRAVRSGD-HHVLTGHKWFTSAPMSDLFLTLAQADEGLSCFLVPRVLPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLK+K+GNRSNA+ ELE+ G+L+G+ + +M LD + S Sbjct: 243 GTRNAISLQRLKDKLGNRSNASAELEYDGAVGWLVGEPGRGVRTIIEMVNATRLDCVLGS 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +GMR L +A H+A R G L+DQPVM+ +AD+A++ AAT + LA S Sbjct: 303 AAGMRAGLVQAAHHAAHRRAFGAALVDQPVMRAVLADLAVESEAATTVGLWLAGS----- 357 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 R+ + KYW CK PA AEA+EC+GG+GY+EE + R +RESP S+ Sbjct: 358 -------RGRLGLAVAKYWVCKRGPAHAAEALECLGGNGYVEESGMPRLFRESPLMSVWE 410 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503 GSGN LDVL +L + + + + L+ G+ + + L + D + AR Sbjct: 411 GSGNVAALDVLRVLAREPDAVVEFTAELDAAAGADRRLDAAVRELKAMLVEPDPESRARR 470 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 L E++AL + L R G +AD F +R + L +A I++ Sbjct: 471 LVERMALVLQGSLLVRHGHPAVADAFCASRLAGDWGVAFGTLPAGVDAKAIVE 523 >gi|239932731|ref|ZP_04689684.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] Length = 481 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 181/458 (39%), Positives = 255/458 (55%), Gaps = 7/458 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQP +A LL L ++L LG S QE + AN + P+L Sbjct: 25 NQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSEQANRHEPELR 84 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP+WH L+R ++ +GL + W R AH R A + Sbjct: 85 THDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVARTAGGLVWGH 139 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A++ L P + K + P + SREY+P + P +K + G+G+TEK Sbjct: 140 TDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRGLLAGMGMTEK 199 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ T+ ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 200 QGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 259 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N QRLK+K+GNRSNA+ E EF T +L+G + +M LD +MS Sbjct: 260 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 319 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 + MR +L EA H+ R R G L+DQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 320 AALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 379 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + EAA+ RI + KYW K PA AEA+EC+GG+GY+EE + RHYRE+P SI Sbjct: 380 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 439 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481 GSGN LDVL L + + L L G+ + Sbjct: 440 EGSGNVNALDVLRALGRDPATAQALLDELALSRGADAR 477 >gi|254242658|ref|ZP_04935980.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192] gi|126196036|gb|EAZ60099.1| hypothetical protein PA2G_03420 [Pseudomonas aeruginosa 2192] Length = 549 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFAETADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|146308779|ref|YP_001189244.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145576980|gb|ABP86512.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 549 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 199/526 (37%), Positives = 281/526 (53%), Gaps = 15/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + +F NQ P G N Y D L + + +E L G Q Sbjct: 5 LHAETHEVF--NQVPSLDGANLYRLDLPLQEWVRRYDGAWAEERLSAYGALAGGALMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN N P ++ G R D VEFHPA+H L+R +I GL W +P R AH Sbjct: 62 GFLANENKPVFKSHDRYGNRIDLVEFHPAYHELMRTAIEHGLPSLPWT---DP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q E+ ++T A++ A+ P V + W PKI + EYDP N QK Sbjct: 117 VARAGLSYLHSQAESASGCPLTMTFAAVPAIRLQPNVAEQWLPKILASEYDPRNLPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ I G Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPIGLGGPGQGYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DG+ N QRLKNK+GN +NA+ E+E+ F ++LG+ + Sbjct: 237 DKGLSCFLLPRHRPDGTRNQFYIQRLKNKLGNWANASSEVEYRGAFAWMLGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S S MR +L +A H+ R V G +L DQP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSSLMRQALTQAAHHCAHRQVGGKLLADQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL R+ + D E+ +AR++ + KYW CK AP ++ EA EC+GG+GY+EE Sbjct: 357 LALCMRMGRALDHLHDEQED-KFARLVTAVGKYWICKRAPEMVYEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF L G + K I L+ Sbjct: 416 MPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFDELGDGHGDARLKAHIQRLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 S + + AR LTE +A+A A L AG + ++D F+ +R Sbjct: 476 TDFSDTADIQYRARQLTEDMAVALQAKLLLEAGNSVVSDAFIASRL 521 >gi|326444079|ref|ZP_08218813.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 537 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 201/521 (38%), Positives = 280/521 (53%), Gaps = 26/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELL----GEYVLSCTAQELARMANYN 80 NQ P +G + +++D L A+ + P+ G S AQE +AN Sbjct: 3 NQAPPLVGYDVFTADRALAEAVERHVPAESAAVAAAELSALGRTAGSAEAQEWGALANEY 62 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL W R H RAA Sbjct: 63 PPRLRTHDRYGNRIDEVEFHPAWHRLLGHAVRAGL-TDAWGRP-------SGHVRRAAGF 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q EAGH S+T A++ AL T P + +W P++ + YD T P K G+ Sbjct: 115 LVWTQAEAGHGCPLSMTHAAVPALRTDPELAAEWEPRLTAHTYDGTLAVPASKPGNLFGM 174 Query: 201 GLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSD F++LAQ G + CFLVP Sbjct: 175 GMTEKQGGSDVRANTTAATPLAAAGEYVLTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVP 234 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 235 RVLPDGGRNVFRLQRLKDKLGNRSNASAEVEFEGTWARRVGEEGRGVRTIIEMVAATRLD 294 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S + MR ++A AIH+ R GG+LID+P+M+ +AD+AL+ AATAL RLA + Sbjct: 295 CVIGSAALMRQAVARAIHHTAHRGAFGGLLIDKPLMRNVLADLALESEAATALGIRLAAA 354 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D E A+ARI P KYW K AEA+EC+GG+GY+EE + R RE+P Sbjct: 355 YDAGT--EAERAFARIAVPAAKYWVTKRCAPTAAEALECLGGNGYVEESGMPRLLREAPL 412 Query: 440 NSILLGSGNAMVLDVLNLLEK---GTNLFEQ---LFSTLEQDLGSSGKKVITILRDSISL 493 NSI GSGN LDVL L++ N F Q L + L + K ++T L D + Sbjct: 413 NSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDGAIKGLLTELADLDGI 472 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L E++AL + L R ++AD F +R Sbjct: 473 ----EARARRLVERMALVLQGSLLVRYAPPEVADAFCASRL 509 >gi|126442217|ref|YP_001057268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 668] gi|126221710|gb|ABN85216.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 668] Length = 559 Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRTEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|12744504|gb|AAK06659.1|AF317886_2 putative acyl-CoA dehydrogenase [Burkholderia pseudomallei] Length = 554 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 9 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 68 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 69 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 123 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 124 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 183 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 184 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 243 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 244 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 303 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 304 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 363 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 364 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 423 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 424 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 483 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 484 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 531 >gi|83718514|ref|YP_440751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|167617528|ref|ZP_02386159.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis Bt4] gi|257140600|ref|ZP_05588862.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|83652339|gb|ABC36402.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis E264] Length = 559 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 202/528 (38%), Positives = 287/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL +GLH + EP + A R A YL A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFS---EP--QPGAMAARCAGYYLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K++SRE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + Y L GHKWF S+P DA ++LA+ G G CF V Sbjct: 189 KQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGHAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AATAL RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAH 368 Query: 379 SF-DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F +EA +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETAPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ + L S + L +SL Sbjct: 429 APVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAELTHLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSET 536 >gi|218889745|ref|YP_002438609.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218769968|emb|CAW25730.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 549 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGGLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|109900211|ref|YP_663466.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109702492|gb|ABG42412.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 548 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 174/459 (37%), Positives = 263/459 (57%), Gaps = 14/459 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKEL-ELLGEYVLSCTAQELARMANYN 80 NQP + N +S+D +L+ + ++ P+ + + G+ +++ +AN N Sbjct: 14 NQPQVLSPYNLWSADRMLMHAVQQNHSDLPTSTLSDFGNIAGDQLMNA-----GELANKN 68 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 PQ + G R D VEFHPA+H L+ ++ +H W +H IRAA L Sbjct: 69 KPQFQPFDGYGRRIDNVEFHPAYHELMGEAMAAQVHAYSWKNE----STSGSHVIRAALL 124 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 ++ +Q +AG ++T A + AL P + + W K+ S EYDP + QK + +G+ Sbjct: 125 FMHSQADAGTTCPLTMTHAGVAALKNAPDLPRYWTDKVISGEYDPRSIPASQKRGITLGM 184 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 G+TEK+GG+D+ T++ +DG Y ++GHK+F S+PM DA ++LAQ + CFL+PR Sbjct: 185 GMTEKQGGSDVRRNTTRADIQADGSYRITGHKFFFSAPMCDAHLILAQSTKGLSCFLLPR 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 +LEDGS N + QRLK+K+G+ SNA+ E+EF +L+G+ + DM L LD Sbjct: 245 ILEDGSLNHVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGRGVPVIIDMVSLTRLDC 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S S MR +L +A+H+ + R G LIDQP+MK +AD+ L++AA+ AL+ R+A + Sbjct: 305 MIGSTSLMRQALVQALHHTQHREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVARAV 364 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A + EA +RI I KYW CK PA + EA EC+GG GY+EE + R YR++P N Sbjct: 365 DLANTNQHEAHLSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENILPRLYRQAPLN 424 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 SI GS N LDVL L K LF+ L++ G + Sbjct: 425 SIWEGSANVQCLDVLRALRKEPEAINALFAELQRAAGKN 463 >gi|167736637|ref|ZP_02409411.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 14] Length = 559 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 200/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLVRLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|294340427|emb|CAZ88808.1| isovaleryl CoA dehydrogenase [Thiomonas sp. 3As] Length = 543 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 200/512 (39%), Positives = 282/512 (55%), Gaps = 9/512 (1%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P N +++D +L AL ++L G + + + + R+AN NTP L Sbjct: 10 NQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGTAASYKQGRLANQNTPVL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ G R D++EFHPAWHAL+ GLH W R + AH RAA L Sbjct: 70 RAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWARP-----QPGAHVARAAGFILQT 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG + ++T ++ A+ + +DW P + EYDP + P QK IG+G+TE Sbjct: 125 QIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPPAQKRGGLIGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + T++ + G Y L+GHKWF S+P DA ++LAQ G + CF VPR D Sbjct: 185 KQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGLSCFFVPRWAPD 244 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N + QRLK+K+GNRSNA+ E+EF +G LLG+ + +M LD + + Sbjct: 245 GSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMGTYTRLDCVLGT 304 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 MR +L++A+HYAR R G LIDQP+M+ +AD+AL++ AA AL+ RLA +FD Sbjct: 305 TGLMRQALSQAVHYARHRQAFGAALIDQPLMRNVLADMALEVEAAIALALRLAQAFDSQH 364 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + ++ R++ P K+ CK + AEAME +GG+GY+EE AR YRE P NSI Sbjct: 365 DEA-QSLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDMQARIYREMPVNSIWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGLAR 502 GSGN M LDVL L K + L + L Q G + + R S +L D + AR Sbjct: 424 GSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSAALRDTDAQQSRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 LT + LA AA L R IA F +R Sbjct: 484 ALTHDLVLALQAALLLRHAPEPIAQAFCASRL 515 >gi|254448697|ref|ZP_05062155.1| fadE8 [gamma proteobacterium HTCC5015] gi|198261705|gb|EDY85992.1| fadE8 [gamma proteobacterium HTCC5015] Length = 579 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 191/524 (36%), Positives = 275/524 (52%), Gaps = 14/524 (2%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMA 77 S++ NQPP N + D LV + + E + +G+ + E A Sbjct: 33 SETHEVFNQPPHLEDFNTFEQDQPLVDALHHAGGDWGVEAVTRIGDLLGRAEWIERGFQA 92 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N N P+ H++ G R D+V+FHPA+H L+ +I +H + W+ +K AH +R Sbjct: 93 NENKPEFHSHDRYGHRIDRVDFHPAYHDLMALAIEHNIHAAPWN-----TPQKGAHAVRL 147 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A YL Q EAG ++T A + A+ TP V K W PKI SREYDP+ + +K Sbjct: 148 AMNYLYNQNEAGSACPLTMTFACVPAIQKTPSVAKQWLPKILSREYDPSFQPIDKKRGAT 207 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 IG+ +TEK+GGTD+ A TS + D Y + GHKWF S+PM DAF+ LAQ E Sbjct: 208 IGMAMTEKQGGTDVRANTSYAYPMGDKEGAGAEYEIVGHKWFCSAPMCDAFLTLAQTESG 267 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CFL+PR DGS N QRLK+K+GNRSNA+ E+EF F ++LGD + +M Sbjct: 268 LSCFLLPRWRPDGSRNEFYIQRLKDKMGNRSNASSEVEFRGAFAWMLGDEGRGVPTIIEM 327 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D I S S MR ++A+ H+ R V G LI+QP+M+ AD+ L++ A A+ Sbjct: 328 VALTRYDCMIGSTSLMRQAVAQVTHHIAHREVMGKRLIEQPLMQNVAADLCLEVEGALAM 387 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + RLA + D + E+ R+ + KYW CK A I E+ EC+GG GY+EE ++R Sbjct: 388 TMRLATALDTPEDEQEQ-NLVRLTTAVGKYWICKRATHHIGESQECLGGIGYVEESIMSR 446 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDS 490 YRE+P NSI GSGN LDVL + K + + + LE+ + + L+ Sbjct: 447 LYREAPVNSIWEGSGNVQCLDVLRAVGKAPEVLDTFIAELEKASSRQAEYDASLAALKSQ 506 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +S + + AR + E +A A L G I + F R Sbjct: 507 LSDFENFQFRARSIVEHMARQMQACQLILMGNELIYNAFCRARL 550 >gi|237729115|ref|ZP_04559596.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2] gi|226908844|gb|EEH94762.1| isovaleryl CoA dehydrogenase [Citrobacter sp. 30_2] Length = 546 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 191/521 (36%), Positives = 285/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71 + +H + ++F NQP N Y SD L A+I L +G+ + + + Sbjct: 5 DTMHWQTHTVF--NQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN P+L Y P G+R D V FHPAWH L++ + +H W+ R+ Sbjct: 63 ELGRLANAFPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARQG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 RAAR L AQ+EAG L ++T +A+ + L P DW + S YD Sbjct: 119 TFVARAARFMLHAQVEAGTLCPVTMTFAATPLLLQMLPAPFHDWLTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++LAQ + Sbjct: 179 RQKRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVLAQAK 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFHDAIGWLLGEEGEGIRHIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S MR + + AI++A +R V G LI+QP+M++ + +AL + T Sbjct: 299 KMGGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLGRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFSVCKSGMPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K ++E L + G + + Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYEMLSEAFAEVKGQDRHYDRMVRQLQ 477 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T+++ L A + R +A + + Sbjct: 478 QRLRKPSEALGREITQQLFLLGCGAQMLRYASPPVAQAWCQ 518 >gi|300310313|ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300073098|gb|ADJ62497.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 550 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 201/518 (38%), Positives = 286/518 (55%), Gaps = 16/518 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G N Y SD+ L + + H L GE + +E+A +AN +TP L Sbjct: 8 NQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGGAEMREMAELANRHTPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D VEFHPAWH LL + GLH W +P AH RAA +L A Sbjct: 68 HTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPW---MQPG--DGAHAARAAGYFLHA 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + + ++FSRE+D + QK S+ IG+G+TE Sbjct: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182 Query: 205 KRGGTDI---AAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 K+GG+D+ A+I ++DG Y LSGHKWF S+PM DA +MLA+ E + CF V Sbjct: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCFFV 242 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR L DG+ N + QRLK+K+GNRSN++ E+EF G ++GD + +M L Sbjct: 243 PRWLPDGTRNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHTRL 302 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G L +QP+M+ +AD+AL+ AAT L R+A+ Sbjct: 303 DCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRVAH 362 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 +FD A + A+ RI+ P K+W CK E ME GG+GY+E +AR YRE+P Sbjct: 363 AFD-APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREAP 421 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-LFEQLFSTLEQDLGSSG-KKVITILRDSISLCKE 496 NSI GSGN M LDVL + + T L L + G ++ + L+ ++ +E Sbjct: 422 VNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPEE 481 Query: 497 DK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 ++ AR L +++ LA + R A FLE+R Sbjct: 482 EREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR 519 >gi|119716580|ref|YP_923545.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537241|gb|ABL81858.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 557 Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 197/531 (37%), Positives = 294/531 (55%), Gaps = 18/531 (3%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMA 77 SD + NQPP +G N ++D LV + S V ++L LG + A+E +A Sbjct: 3 SDIRASANQPPALVGHNVVTADLALVEAVTRHASADVVEDLAALGAEAGTDEAREHGLLA 62 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N N P+L Y G R D+VEFHP+WH L+ R++ GL + W++ + AH RA Sbjct: 63 NRNEPRLAPYDRYGNRIDEVEFHPSWHWLMGRAVGHGLAAAPWEQ--QEAGAPHAHVRRA 120 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A + EAGH S+T A++ AL + K+W P + S YDP + K Sbjct: 121 AGFMAWSHTEAGHGCPISMTYAAVPALRADEALAKEWTPLLASTTYDPGLRLATTKAGAL 180 Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGC 255 G+G+TEK+GG+D+ ++ + S G Y L GHKWF S+PM+D F++LAQ EG + C Sbjct: 181 AGMGMTEKQGGSDVRTNVTEARPTSAHGEYTLHGHKWFTSAPMNDMFLVLAQAEGSALTC 240 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+VPR+L DG+ N + RLK+K+GNRSNA+ ELE T G+ LGD + +M Sbjct: 241 FVVPRVLADGTRNQMDVVRLKDKLGNRSNASSELELDGTVGYRLGDEGRGVRTIIEMVAA 300 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 LD + S S MR ++ EA +A R G +L D+P+M+ +AD+A++ AATAL+ R Sbjct: 301 TRLDCVLGSTSLMRRAVNEASWHAAHRTAFGALLADKPLMQNVLADLAVETEAATALAIR 360 Query: 376 LANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 LA + D +A + EAA+ RI P+ K+W CK P ++AEA+EC+GG+GY+E+ + Sbjct: 361 LAAAVDGLGRPDAAEAAHEAAFRRIALPLAKFWVCKRTPFLVAEALECLGGNGYVEDSGM 420 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 YRE+P NS+ GSGN LDVL L + + + + + + G ++ + D+ Sbjct: 421 PLLYREAPVNSVWEGSGNVNALDVLRALGREPEVLDAWITEVGRARGGD-ARLDRAIEDT 479 Query: 491 ISLCKEDKG-------LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++L G AR L ++AL A L R ++ADVF +R Sbjct: 480 LALIGSLLGDPDSLEVNARRLASRMALCLQGALLVRFAPPEVADVFCASRL 530 >gi|254776935|ref|ZP_05218451.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 542 Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N S L+ ALI E+ +G S AQ +A+ Sbjct: 2 SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I GLH + W R AH +RAA Sbjct: 62 RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL P + K + P + SREYDP + K + Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CFL+ Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR L AI++A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D+A + EA RI +KYW CK + AEA+EC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF L + G + + LR ++ Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I LA + L R G +A+ FL R Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514 >gi|118466870|ref|YP_883634.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118168157|gb|ABK69054.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 542 Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N S L+ ALI E+ +G S AQ +A+ Sbjct: 2 SDTHVVTNQVPPLDNYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I GLH + W R AH +RAA Sbjct: 62 RNRPILHTHDRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL P + K + P + SREYDP + K + Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CFL+ Sbjct: 176 GMSMTEKQGGSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLL 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR L AI++A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355 Query: 379 SFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D+A + EA RI +KYW CK + AEA+EC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDKAVRGDQREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF L + G + + LR ++ Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELD 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I LA + L R G +A+ FL R Sbjct: 476 TIQYRARKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514 >gi|291303095|ref|YP_003514373.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572315|gb|ADD45280.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 542 Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 186/481 (38%), Positives = 266/481 (55%), Gaps = 16/481 (3%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 LGE + S A A AN N P L + G R D+V+FHPAWH + S+ G H W Sbjct: 48 LGEVLGSGDAARWAEQANVNRPVLRTHDRYGNRVDEVDFHPAWHRFMALSVEFGCHAMPW 107 Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 +P R AH RA ++ Q+E GH S+T AS+ L P + W P I S Sbjct: 108 R---DP--RDGAHAARAVLFSMLGQIEPGHGCPISMTYASVPVLRANPELAAQWEPSITS 162 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 YDP + K V +G+ +TEK+GG+D+ A ++ ++ DG Y L GHKWF S+PM+ Sbjct: 163 TSYDPGLRPRQAKEGVLVGMAMTEKQGGSDVRANVTRATRLDDGTYALRGHKWFCSAPMN 222 Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 DAF++LAQ EG + CFL+PR+L DGS N + QRLK+K+GN +NA+ E+E + F +G Sbjct: 223 DAFLVLAQAEGGLSCFLLPRVLPDGSRNAIRIQRLKDKLGNHANASSEIELHDAIAFPVG 282 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + +M LD I + +GMR +AEA +A R G LI+QP+M++ +A Sbjct: 283 EEGRGVRTIIEMVNHTRLDCVIGTAAGMRQCVAEATWHAAHRSAFGKPLIEQPLMRQVLA 342 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ ++ AATA RLA ++D R EEAA+ R+ + KYW CK P AEA+EC+G Sbjct: 343 DLCVESEAATATMMRLAAAYD----RPEEAAFRRLATAVAKYWVCKRGPGHAAEALECLG 398 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 G+GY+EE +AR YRE P SI GSGN + LD+L + E + E L S Sbjct: 399 GNGYVEEAPLARRYREQPLMSIWEGSGNVVCLDILRAMRTDPETIEAFLN--EVGLASGA 456 Query: 481 KKV----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 + + L+ ++ D+ AR L + +ALA + L R +++A F R D Sbjct: 457 DRAFDAHVAGLKRRLA-AGPDEASARLLADDLALALQGSLLLRHAPSEVAGAFTAARLGD 515 Query: 537 N 537 N Sbjct: 516 N 516 >gi|56460648|ref|YP_155929.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR] gi|56179658|gb|AAV82380.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR] Length = 559 Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 195/538 (36%), Positives = 288/538 (53%), Gaps = 13/538 (2%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQP N Y +D +L A+ S + +L GE + E AN P+L Sbjct: 20 NQPTALENYNLYLADKALRKAVEREGASWAYSDLIAFGELAGKADSIEQGFQANKYQPEL 79 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D ++FHP +H L+ +I GLH S W EP + AH RAA+ YL Sbjct: 80 RTHDRYGHRIDLIDFHPTYHQLMSTAIEHGLHASPWS---EP--KLGAHVARAAKYYLHT 134 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EA H ++T AS+ AL P + K+W PKI +R+YDP N +K++V IG+ +TE Sbjct: 135 QVEASHGCPITMTFASIPALRHQPDLFKEWGPKITARQYDPRNIPHTEKSAVTIGMAMTE 194 Query: 205 KRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GG+D+ +++ G++ S Y L GHKWF+S+PM DAF++LAQ + CFLVPR Sbjct: 195 KQGGSDVRLNSTRAYPIGKEGSGQAYELVGHKWFVSAPMCDAFLVLAQTASGLSCFLVPR 254 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DGS N + Q+LK K+GN +NA+ E E G+++G+ + +M D Sbjct: 255 WRPDGSKNPIQIQQLKQKMGNAANASSETELRGALGWMVGEEGKGVRTIIEMVATTRYDC 314 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S SGMR ++ +AIH+A R G L +QP+M+ +AD+A++ AA R+A + Sbjct: 315 MIGSSSGMRQAVVQAIHHASHREAFGTKLSEQPLMQNLLADLAIESEAAMTYMMRIARAM 374 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E +RI PI KYW CK P EAME IGGSG +E + R +RESP N Sbjct: 375 DN-QDDEHEKLLSRIATPIGKYWICKRTPNHAYEAMEVIGGSGVMENHIMPRLFRESPVN 433 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--K 498 +I GSGN LDVL +EK + + F+ L++ G+ + I+R + + Sbjct: 434 AIWEGSGNIQCLDVLRAIEKQPEVLDVYFAELQRAQGADKRLDQFIMRLKSEFTDRNMLQ 493 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 AR +T+ +A+ AA L + D+AD F +R + + L N A I++ Sbjct: 494 YRARSITDSMAVGLQAALLVQHAGTDVADAFCASRLAASTGLNYGTLPTGLNCAAIVE 551 >gi|116052012|ref|YP_789145.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115587233|gb|ABJ13248.1| possible acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 549 Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 199/529 (37%), Positives = 288/529 (54%), Gaps = 13/529 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +HQ +++ NQ P G N Y D L + +E L+ GE + Sbjct: 3 LHQYAETHEVTNQVPSLDGANLYRLDLPLQEWGRRYQGGWAEERLQRYGE-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ H++ G R D VEFHPA+H L+R +I L W +P R A Sbjct: 62 GFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHELPSLPWT---DP--RPGAQ 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA YL +Q EAG ++T AS+ A+ + + W PKI SREYDP N QK Sbjct: 117 VARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPKILSREYDPRNVPMEQK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V IG+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LA Sbjct: 177 AGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGHKWFCSAPMCDAFLTLAYT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR DGS N QRLK+K+GN SNA+ E+E+ +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEIEYRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D I S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGRVLAEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ R+ ++ D A EE +AR++ + KYW CK APA+I EA EC+GG+GY+EE Sbjct: 357 LALTLRMGHALDRAHDEQEE-KFARLVTAVGKYWICKRAPAMINEASECMGGAGYVEETI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NSI GSGN LDVL L K + + LF+ L G + I L+ Sbjct: 416 LPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDARLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + + + + AR LTE +A+A A L AG + ++D F+ +R D Sbjct: 476 AAFADTADIQYRARQLTEDVAIALQAKLLLEAGNSAVSDAFIGSRLGDG 524 >gi|170719826|ref|YP_001747514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169757829|gb|ACA71145.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 559 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 201/533 (37%), Positives = 291/533 (54%), Gaps = 14/533 (2%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVL 66 + L MN +HQ +++ NQPP G N Y D L F + +++ G + Sbjct: 6 QELPMN-LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDVYGA-LA 63 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 +AN + P ++ G R D VEFHPA+H L+R ++ GL W EP Sbjct: 64 GGPLMAAGFLANTHKPAFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP 120 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 R AH RA+ YL +Q EAG ++T A++ AL P + + W PKIF+REYDP Sbjct: 121 --RPGAHVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKIFAREYDPR 178 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDA 242 N K V IG+ +TEK+GGTD+ A T++ G +Y L GHKWF S+PM DA Sbjct: 179 NVGDQHKAGVTIGMAMTEKQGGTDVRANTTRAYPVGSPGPGQVYELVGHKWFCSAPMCDA 238 Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 F+ LAQ + + CFL+PR D S N QRLKNK+GN SNA+ E+EF +++G+ Sbjct: 239 FLTLAQTDKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMVGEE 298 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+ Sbjct: 299 GRGVPTIIEMVAMTRFDCMVGSSALMRQALTQATHHCAHRKVGGRVLSEQPLMQNVLADL 358 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL+ AA ALS R+ + ++ ++A +AR++ + KYW CK APA+I EA EC+GG+ Sbjct: 359 ALESEAALALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGA 417 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 GY+E+ + R YRE+P NS GSGN LDVL L K + + LF+ L G Sbjct: 418 GYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLA 477 Query: 483 V-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 I L+ + + + + AR LTE IALA A L AG ++D F+ +R Sbjct: 478 AHIGNLKGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNTSVSDAFIGSRL 530 >gi|254822769|ref|ZP_05227770.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 542 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 188/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 SD+ NQ P N +S L+ ALI E+ +G S AQ +A+ Sbjct: 2 SDTHVVTNQVPPLEDHNPATSAVLIEALIREGGQWGLDEVNEVGALSASREAQRWGELAD 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D+VE+ PA+H L+R +I G+H + W R AH +RAA Sbjct: 62 RNRPILHTHDRNGHRIDEVEYDPAYHELMRAAITHGMHAAPWADE-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + +E GH+ S+T A + AL P + + + P + SREYDP + K + Sbjct: 117 KTSVWT-VEPGHVCPISMTYAVVPALRYNPELAQVYEPLLTSREYDPELRPATAKPGITA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+Q +DG Y L GHKWF S+PM D F++LAQ G + CF++ Sbjct: 176 GMSMTEKQGGSDVRAGTTQATPNADGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFML 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DGS N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L L Sbjct: 236 PRVLPDGSRNRMFLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR L AI++A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCTLGSATSMRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAG 355 Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D+A E EA RI +KYW CK + AEA+EC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDKAVRGDETEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF + + G + + LR ++ + Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATRPECVEVLFDEIAESAGQDPRLGNHVARLRADLASLE 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + E I LA + L R G +A+ FL R Sbjct: 476 TIAYRGRKVAEDICLALQGSLLVRHGHPAVAEAFLTTRL 514 >gi|240167672|ref|ZP_04746331.1| acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 542 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 189/518 (36%), Positives = 276/518 (53%), Gaps = 9/518 (1%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 D+ NQ P N+ +S L+ ALI E+ LG AQ +A+ Sbjct: 3 DTHVVTNQVPPLENHNSATSPMLVEALIREGGQWGLDEVNELGAISGGHEAQRWGELADR 62 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P LH + G R D+VE+ PA+H L+R +I GLH + W R AH +RAA+ Sbjct: 63 NRPVLHTHDRVGHRIDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAAK 117 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + E GH+ S+T A + AL P + + P + SREYDP K K + G Sbjct: 118 ASVWTP-EPGHVCPISMTYAVVPALRHNPELASVYEPLLTSREYDPEFKLATTKRGITAG 176 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 + +TEK+GG+D+ A T++ DG Y L+GHKWF S+PM D F++LAQ + CF++P Sbjct: 177 MSMTEKQGGSDVRAGTTEATPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPKGLSCFMLP 236 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD Sbjct: 237 RILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGAIAWLVGEEGRGVPTIIEMVNLTRLD 296 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR L AIH+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A + Sbjct: 297 CTLGSATSMRTGLTRAIHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAGA 356 Query: 380 FDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D A+ +EA RI +KYW CK + AEA+EC+GG+GY+E+ + R YRE+P Sbjct: 357 TDNAARGDLKEALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREAP 416 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 I GSGN LD L + E LF L Q G + + LR+ + Sbjct: 417 LMGIWEGSGNVSALDTLRAMATRPECVEVLFDDLAQSAGQDARLDGHVERLREQLGDLDT 476 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I LA + L R G +A+ FL R Sbjct: 477 IQYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 514 >gi|291441087|ref|ZP_06580477.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291343982|gb|EFE70938.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 467 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 178/437 (40%), Positives = 249/437 (56%), Gaps = 7/437 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQP +A LL L ++L LG S QE + AN + P+L Sbjct: 25 NQPAPLAPYDASDDIPLLEGLRREGAGWAEEDLRRLGRLAGSAQVQEWSEQANRHEPELR 84 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VEFHP+WH L+R ++ +GL + W R AH R A + Sbjct: 85 THDRYGHRIDEVEFHPSWHHLMRTAVAEGLAAAPWADD-----RPGAHVARTAGGLVWGH 139 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A++ L P + K + P + SREY+P + P +K + G+G+TEK Sbjct: 140 TDAGHGCPTSMTYAAVPVLRRQPELAKVYEPLLTSREYEPGLRVPTEKRGLLAGMGMTEK 199 Query: 206 RGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ T+ ++ G+Y L GHKWF S+PM D F++LAQ G + CFLVPR+L D Sbjct: 200 QGGSDVRTNTTTATPTAEPGVYALRGHKWFTSAPMCDVFLVLAQAPGGLSCFLVPRVLPD 259 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N QRLK+K+GNRSNA+ E EF T +L+G + +M LD +MS Sbjct: 260 GTRNTFRIQRLKDKLGNRSNASSEPEFDGTAAWLVGPEGQGVKTIIEMVNCTRLDCVMMS 319 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 + MR +L EA H+ R R G L+DQP+M+ +AD+AL+ AAT L+ RLA + D A Sbjct: 320 AALMRKTLVEAGHHVRHRSAFGARLVDQPLMRNVLADLALESEAATTLTLRLAGAADRAV 379 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + EAA+ RI + KYW K PA AEA+EC+GG+GY+EE + RHYRE+P SI Sbjct: 380 RGDAGEAAFRRIATAVGKYWVTKRGPAFTAEALECLGGNGYVEESGMPRHYREAPLLSIW 439 Query: 444 LGSGNAMVLDVLNLLEK 460 GSGN LDVL L + Sbjct: 440 EGSGNVNALDVLRALGR 456 >gi|53717865|ref|YP_106851.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126454819|ref|YP_001064510.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1106a] gi|242314916|ref|ZP_04813932.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|254295768|ref|ZP_04963225.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|52208279|emb|CAH34211.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126228461|gb|ABN92001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106a] gi|157805690|gb|EDO82860.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|242138155|gb|EES24557.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] Length = 559 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 199/528 (37%), Positives = 289/528 (54%), Gaps = 17/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P + A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--QPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 189 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 248 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 249 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 308 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 309 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 368 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 369 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 428 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN M +DVL +E+ + LF S + L +SL Sbjct: 429 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLE 488 Query: 495 KEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 E + AR + ++IAL + A+ L R G +A F+ RF + T Sbjct: 489 PEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 536 >gi|118472712|ref|YP_885773.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118173999|gb|ABK74895.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 551 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 199/535 (37%), Positives = 282/535 (52%), Gaps = 11/535 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P N +S L ALI E+ LG S AQ +A+ N P LH Sbjct: 18 NQVPPLEDYNPATSPVLTEALIREGGEWGLDEVHALGALSGSRQAQRWGELADRNRPILH 77 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+ PA+H L+ ++ GLH + W R AH +RAA+ + Sbjct: 78 THDRYGHRIDEVEYDPAYHELMSVAVSYGLHAAPWADD-----RPGAHVVRAAKTSVWTP 132 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 E GH+ S+T A + AL P + K + P + SR YDP K P K + G+ +TEK Sbjct: 133 -EPGHICPISMTYAVVPALRFNPELAKIYEPLLTSRVYDPELKIPTTKLGITAGMSMTEK 191 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CF +PR+L DG Sbjct: 192 QGGSDVRAGTTQATPNGDGSYTLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLPRILPDG 251 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD + S Sbjct: 252 RRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSA 311 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + MR L+ A+H+A+ R G LIDQP+M+ +AD+A++ AAT L+ R+A + D+A Sbjct: 312 TSMRNGLSRAVHHAQHRKAFGAYLIDQPLMRNVLADLAIEAEAATMLAMRMAGATDKAVH 371 Query: 386 RSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E E RI KYW CK A AEAMEC+GG+GY+E+ + R YRE+P I Sbjct: 372 GDEREKLLRRIGLAAGKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAPLMGIWE 431 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKEDKGLA 501 GSGN LD L + E LF L Q G + V T+ RD + + + A Sbjct: 432 GSGNVSALDTLRAMATRPECVEVLFDELGQTAGHDERLDAHVATLQRD-LGELETIQYRA 490 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + E I+LA + L R G +A+ FL +R S L + A II+ Sbjct: 491 RKVAEDISLALQGSLLVRHGHPAVAEAFLASRLGGQWGSAFGTLPTGLDLAPIIE 545 >gi|186477672|ref|YP_001859142.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184194131|gb|ACC72096.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 557 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 200/524 (38%), Positives = 288/524 (54%), Gaps = 17/524 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P N ++SD+ L A + + H+E L G + + LA +AN +TP+L Sbjct: 14 NQAPPLANYNLFTSDAALAAAVEREGAAWHREALTRDGAALTTPEILALAELANRHTPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ P GER D +EFHPAWH LL +GLH + +P + A R A +L A Sbjct: 74 AAFSPRGERIDALEFHPAWHTLLGLLRREGLHALPFS---DP--QPGAMVARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K++SRE+DP + QKTS+ IG+G+TE Sbjct: 129 QLESGSLCPVTMTFASIPVLQREPGLFATLRDKLYSREHDPRDLPLEQKTSMMIGMGMTE 188 Query: 205 KRGGTDI-----AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257 K+GG+D+ A + G G Y L GHKWF S+P DA ++LA+ G CF Sbjct: 189 KQGGSDVRSNRTQAFAASGSGRGAG-YRLVGHKWFFSAPQCDAHLVLARTGDHEGLSCFF 247 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G ++GD + +M Sbjct: 248 VPRFAPDGSKNAVRIQRLKDKLGNRSNASSEVEFFDAWGIMIGDEGRGVPTIIEMANYTR 307 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I S + MR +L +AIH+AR R G L DQP+M+ +AD+AL+ AAT L RLA Sbjct: 308 LDCVIGSAALMRAALVQAIHHARHRSAFGKHLADQPLMRNVLADLALESEAATVLFMRLA 367 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 +F++ + EE A+ R++ P KYW CK EAME GG+GY+EE +AR YRE+ Sbjct: 368 RAFEDMTNAPEERAWRRLVTPAAKYWVCKRTLEFTGEAMEVWGGNGYVEEGPMARFYREA 427 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE---QDLGSSGKKVITILRDSISLC 494 P NSI GSGN M LDVL +E+ + L + Q + + + S S Sbjct: 428 PVNSIWEGSGNVMCLDVLRAMEREPGAAQALLAAWRAHAQAHPALNAALDRLTAASTSAP 487 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538 + + AR + ++I L + A L + + +AD ++ R + C Sbjct: 488 ETREVSARRIAQQIVLIAQAVLLVQHAPSFVADAYIATRLGEGC 531 >gi|332308244|ref|YP_004436095.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175573|gb|AEE24827.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 549 Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 188/515 (36%), Positives = 280/515 (54%), Gaps = 8/515 (1%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQP + N ++ DSLL A+ N + LE G +V+ + AN + P Sbjct: 14 NQPEIMSPYNLWTCDSLLQTAVKLNGGQHAEQTLENYG-HVVGHQLMDAGEQANRHKPIF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D VEFHPA+H L+ ++ +H W + K AH +RAA +++ Sbjct: 73 QPFDRYGRRTDTVEFHPAYHELMTAAMQAQVHAYSWRNPSQ----KGAHVVRAALMFMHY 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q +AG ++T A++ L +P W K+ + EYDP +K + +G+G+TE Sbjct: 129 QADAGTSCPLTMTHAAVAVLNQSPNFPAFWTQKLINGEYDPRALPAEKKHGITLGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ T+Q K DG Y + GHK+F S+P+ DA ++LAQ E + CFL+PR+L D Sbjct: 189 KQGGSDVRRNTTQAIKQPDGNYHVIGHKFFFSAPLCDAHLILAQTENGLTCFLLPRILPD 248 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G N + QRLK+K+G+ SNA+ E+EF +L+G+ + DM L LD I S Sbjct: 249 GQLNQVRIQRLKDKLGDWSNASSEVEFQGATAYLVGEEGQGVKMIIDMVSLTRLDCMIGS 308 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR +L +A+H+ + R G LIDQP+MK +AD+ L++AA+ AL+ R+A + D A Sbjct: 309 TALMRQALVQALHHTQNREAFGAKLIDQPLMKNVLADLTLEVAASLALTMRVAKAVDLAS 368 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 S EA ++RI I KYW CK PA + EA EC+GG GY+EE + R YR++P NSI Sbjct: 369 SNKHEAGFSRIATAIGKYWICKRTPAFVNEAQECLGGIGYVEENVMPRLYRQAPLNSIWE 428 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502 GS N LDVL L K + LF L G + + + L+ + + + + +R Sbjct: 429 GSANVQCLDVLRALRKEPEVKTALFDELSTAAGKNSYYDQHLVALKHAFNEPETLEVRSR 488 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + EK+AL A L D+AD F R N Sbjct: 489 LVVEKMALGLQGALLLNGDDKDLADTFCHARLGGN 523 >gi|311742200|ref|ZP_07716010.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311314693|gb|EFQ84600.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 545 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 190/534 (35%), Positives = 288/534 (53%), Gaps = 8/534 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P + +A A + EL +G S +QEL +A + P LH Sbjct: 9 NQVPPLVDYDAADYAPYTEAFTRVGATGALDELSAIGRDAGSAASQELGDLAERHEPVLH 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V + P++H L+ R+ GLH + W + +P AH RAA L + Q Sbjct: 69 THDRYGHRIDRVVYDPSYHQLMTRATGYGLHGTPW-VTGDP----HAHLRRAAGLSVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 ++AGH S+T A++ AL P + + P + + YDP+ AP K + G+ +TEK Sbjct: 124 VDAGHQCPISMTYAAVPALRVDPELAARFEPLLATTVYDPSFAAPETKAGLTAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+ + +DG Y L+GHKWF S+PMSD + LAQ G + CF+VPR+L DG Sbjct: 184 QGGSDVRANTTHATEQADGTYRLTGHKWFTSAPMSDILLTLAQAPGGLTCFVVPRVLPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + N + QRLK+K+GNRSNA+ E+E+ FG+ LGD + +M + LD I S Sbjct: 244 TTNRVALQRLKDKLGNRSNASSEVEYDQAFGWRLGDEGRGVRTIIEMVNMTRLDCTIGSA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 SGMRV + A+H+A R G L+DQP+M+ +AD+A++ A++ ++ LA+ D A + Sbjct: 304 SGMRVGVQAAVHHATHRSAFGAALVDQPLMRNVLADLAVEAEASSTVAMWLADLTDRALA 363 Query: 386 RSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E AA RI ++KY+ CK P AEA+EC+GG+GYIE+ + R YRE+P S+ Sbjct: 364 GDERAADLRRISLAVSKYYVCKRGPVHAAEALECLGGNGYIEDSRMPRLYREAPLMSVWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + K LF L+ G+ + L+D + + AR Sbjct: 424 GSGNVAALDTLRAVAKQPATLTALFDELDSVAGAEPRLDAFARRLKDQFTDPASAELRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + +A+A A+ L R G ++D F +R + + L + A II+ Sbjct: 484 RIVGDLAIALQASLLVRFGHPAVSDAFAASRLDRDWGTVFGTLPAGLDLAPIIE 537 >gi|300899726|ref|ZP_07117951.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1] gi|300356698|gb|EFJ72568.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 198-1] Length = 546 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+M L+ P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|297561763|ref|YP_003680737.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846211|gb|ADH68231.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 543 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 186/520 (35%), Positives = 282/520 (54%), Gaps = 10/520 (1%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMA 77 P+ +F NQ P A +L+ L E+ +G+ S + A Sbjct: 3 PTHEVF--NQAPPLGDYAAAEDPALVEGLRREGAGWAEAEVREVGDAAGSERVRAWGESA 60 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P L + G R D+V++ PA+H L+ +++ G+H + W R AH RA Sbjct: 61 NAYPPVLRTHDRYGHRVDEVDYQPAYHVLMDQAVEHGMHAAPWADG-----RPGAHVARA 115 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ +L +Q EAGH S+T A++ AL +P + + + P + + YD +AP K + Sbjct: 116 AKFFLWSQPEAGHGCPVSMTYAAVPALRHSPELARRYEPLLTAPVYDFGLRAPHTKRGLL 175 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G+ +TEK+GG+D+ A T++ ++G + L+GHKWF S+PMSD F+ LAQ + CFL Sbjct: 176 AGMSMTEKQGGSDVRANTTRAVPTAEGHHVLTGHKWFTSAPMSDFFLTLAQAPEGLSCFL 235 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR+LEDG N L QRLK+K+GNRSNA+ ELE+ L+G+ + +M Sbjct: 236 VPRVLEDGGRNALHIQRLKDKLGNRSNASAELEYDGAVAHLVGEPGRGVPTIIEMVNSTR 295 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I S +GMR ++ A+H+A R GG+L++QP+M+ +AD+AL+ AATAL RLA Sbjct: 296 LDCVIGSAAGMRAAVVHALHHAEHRSAFGGVLVEQPLMRNVLADLALESEAATALMTRLA 355 Query: 378 NSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D A E EAA+ R+ + K+W K PA AEA+EC+GG+GY+EE + R +R+ Sbjct: 356 GAVDRAVRGDETEAAFRRLGVAVGKFWVTKRQPAHAAEALECLGGNGYVEESGMPRLFRD 415 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 SP NS+ GSGN LDVL + + E + L G + L ++ Sbjct: 416 SPLNSVWEGSGNVAALDVLRAMGRSPESLEAFLAELRAAAGVDDHYDAAVKRLEQALGDP 475 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +E + AR + E +AL A+ L R +A+ F +R Sbjct: 476 EEAQYRARTVVELMALVLQASVLLRHAPTPVAEAFTASRL 515 >gi|239815892|ref|YP_002944802.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239802469|gb|ACS19536.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 546 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 179/445 (40%), Positives = 262/445 (58%), Gaps = 14/445 (3%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP +G N + ++ L AL N PS+ +L LG + S Q AR+AN + P+ Sbjct: 8 FNQPEPLVGYNLFETNRPLRDALKFNAPSLQLAQLSELGATIGSAEMQAHARLANTHPPE 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + G R D+VEFHP++H L+ ++ GLH + W + +H +RAA L Sbjct: 68 LHTHDRFGRRIDEVEFHPSYHVLMAAAVGAGLHGTPWTGT-----SASSHVLRAAGFMLF 122 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +LE L S+T A+ AL + V+ DW PK+ S YDP + K V +G+G+T Sbjct: 123 TELEPSILCPVSMTYAATPALRSNAVVYADWGPKLGSLWYDPALASFKDKPGVTMGMGMT 182 Query: 204 EKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T+Q G Y ++GHKWF S+PM DAF++LAQ + CF +P Sbjct: 183 EKQGGSDVRANTTQAVRGGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSCFFLP 242 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DGS N + QRLK+K+GN++NA+ E+EF +L+G+ + +M + LD Sbjct: 243 RVLPDGSRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTMTRLD 302 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ + MR +L A+++A +R G LI QP+MK +AD+AL+ A+TAL+ RLA + Sbjct: 303 CALGTSGLMRQALGIALNHASQRMAFGKPLIGQPLMKNVLADLALESEASTALAIRLARA 362 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHYRE 436 FD+ ++ E AR++ P+ K+W CK EAMEC+GG+GY+EE +AR YRE Sbjct: 363 FDQ-QADEHERLMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMARIYRE 421 Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461 P NSI G+GN M LD+L L KG Sbjct: 422 MPLNSIWEGAGNIMALDLLRGLRKG 446 >gi|301024538|ref|ZP_07188213.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1] gi|300396537|gb|EFJ80075.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 69-1] Length = 546 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+M L+ P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|294632084|ref|ZP_06710644.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292835417|gb|EFF93766.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 544 Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 193/543 (35%), Positives = 289/543 (53%), Gaps = 26/543 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPP G + +++D L + A V EL LG S QE AN N Sbjct: 10 NQPPPLSGYDVFTADRALTEAVDRHVGAGLLDEVRGELAGLGRAAGSAQLQEWGAQANEN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+V+FHPAWH LL + + GL + W+R H RAA Sbjct: 70 PPRLRTHDRYGHRIDEVDFHPAWHRLLGKGVSAGL-TAAWNRP-------AGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG+ S+T A++ AL P + +W P++ S YD + K G+ Sbjct: 122 LVWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSMVYDRELRPAHLKPGALFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 +TEK+GG+D+ A T+ + +++ G Y L+GHKWF S+PMSDAF++LAQ + CFLVP Sbjct: 182 AMTEKQGGSDVRANTTAARPLAESGAYELTGHKWFCSAPMSDAFLVLAQAPAGLTCFLVP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N QRLK+K+GNRSNA+ E+EF T+ +G+ + +M LD Sbjct: 242 RVLPDGARNVFRVQRLKDKLGNRSNASAEVEFDGTWARRVGEEGRGVRTIIEMVAATRLD 301 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S MR ++A+A+H+ R GG L+D+P+M+ +AD+AL+ AAT L+ RLA + Sbjct: 302 CVLGSAGLMRQAVAQAVHHCAYREAFGGRLLDKPLMRNVLADLALESEAATTLALRLAAA 361 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D+ +E A RI P KYW K + EA EC+GG+GY+EE + R RESP Sbjct: 362 CDDGG--EQERALLRIAVPAAKYWVTKRCAPLAVEASECLGGNGYVEESGLPRLVRESPL 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSGKKVITILRDSISL 493 NSI G+GN LDVL L + F+ + + L ++ K ++T L D + Sbjct: 420 NSIWEGAGNVQALDVLRALRREPGAFDAYLREVGLARGADHRLDAAIKDLLTELADLAGV 479 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553 + AR L E++AL + L R ++AD F +R + ++ L + A Sbjct: 480 ----EARARRLVERLALVLQGSLLVRYAPPEVADAFCASRLGGDRGASFGTLPHTLDLAS 535 Query: 554 IID 556 +++ Sbjct: 536 VVE 538 >gi|296136192|ref|YP_003643434.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295796314|gb|ADG31104.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 543 Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 203/514 (39%), Positives = 284/514 (55%), Gaps = 13/514 (2%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P N +++D +L AL ++L G + + + E R+AN NTP L Sbjct: 10 NQAPPLQDYNLFTADPALREALARAGGGWAEEQLTRQGAELGAAASYEQGRLANQNTPVL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 HA+ G R D++EFHPAWHAL+ GLH W + + AH RAA L Sbjct: 70 HAFDARGFRRDQIEFHPAWHALMSDIARRGLHTGPWAQP-----QPGAHVARAAGFILQT 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG + ++T ++ A+ + +DW P + EYDP + QK IG+G+TE Sbjct: 125 QIEAGSMCPTTMTYGAIPAMSRDALLARDWLPTLMRPEYDPRDLPLAQKRGGLIGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + T++ + G Y L+GHKWF S+P DA ++LAQ G + CF VPR D Sbjct: 185 KQGGSDLRSNTTRAEPDGAGGYRLTGHKWFFSAPQCDAHLVLAQTAGGLSCFFVPRWAPD 244 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N + QRLK+K+GNRSNA+ E+EF +G LLG+ + +M LD + + Sbjct: 245 GSKNPVLIQRLKDKLGNRSNASSEVEFQGAWGHLLGEEGRGVPTILEMGTYTRLDCVLGT 304 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 MR +L++A+HYAR R G LIDQP+M+ +AD+AL++ AA AL+ RLA +FD Sbjct: 305 TGLMRQALSQAVHYARHRLAFGAALIDQPLMRNVLADMALEVEAAIALALRLAQAFD--- 361 Query: 385 SRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 S+ +EA R++ P K+ CK + AEAME +GG+GY+EE AR YRE P NSI Sbjct: 362 SQHDEAQLLLRRLLTPAGKFRICKRGAELAAEAMEVLGGNGYVEEDVQARIYREMPVNSI 421 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGL 500 GSGN M LDVL L K + L + L Q G + + R S +L D + Sbjct: 422 WEGSGNVMCLDVLRALGKNPRTADALMAELAQAQGRNAHFDAHLQRFSAALRDTDAQQSR 481 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LT + LA AA L R IA F +R Sbjct: 482 ARALTHDLVLALQAALLLRHAPEPIAQAFCASRL 515 >gi|318061297|ref|ZP_07980018.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG] gi|318080613|ref|ZP_07987945.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF] Length = 533 Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 189/482 (39%), Positives = 268/482 (55%), Gaps = 12/482 (2%) Query: 57 ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116 EL LG S AQE AN N P+L + G R D+VEFHPAWH LL ++ GL Sbjct: 31 ELSELGRAAGSAQAQEWGAQANENPPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL- 89 Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 S W R H RAA Q EAGH S+T A++ AL P + +W P Sbjct: 90 TSAW-------ARPGGHVRRAAGFLTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEP 142 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFL 235 + SR YD + K G+G+TEK+GG+D+ A T++ ++ DG + L+GHKWF Sbjct: 143 LLTSRVYDEGLRPASAKAGALFGMGMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFC 202 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 S+P+SD F++L Q G + CFLVPR+L DG N QRLK+K+GNRSNA+ E+EF T+ Sbjct: 203 SAPVSDGFLVLGQAPGGLSCFLVPRVLADGERNVFAIQRLKDKLGNRSNASAEVEFDGTW 262 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 L+G+ + +M LD A+ S + MR ++A+AIH+A R GG L+ +P+M Sbjct: 263 ARLVGEEGRGVRTIIEMVSATRLDCALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLM 322 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAE 414 +AD+AL+ AAT L+ RLA ++D A + E E A R+ P+ KYW K V+AE Sbjct: 323 SNVLADLALESEAATTLALRLAAAYDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVAE 382 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A+EC+GG+GY+EE + R RESP NS+ GSGN LDVL L++ + L Sbjct: 383 ALECLGGNGYVEESGLPRLLRESPLNSLWEGSGNVQALDVLRALQREPGALDAFLGELGA 442 Query: 475 DLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532 G+ + + L ++ + + AR L E++AL + L R ++AD F + Sbjct: 443 ARGADHRLDAAVKHLFQELADLEGIEARARRLVERMALVLQGSLLVRFAPPEVADAFCAS 502 Query: 533 RF 534 R Sbjct: 503 RL 504 >gi|330811901|ref|YP_004356363.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380009|gb|AEA71359.1| Putative dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 549 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 194/528 (36%), Positives = 281/528 (53%), Gaps = 17/528 (3%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G + E Sbjct: 3 LHQFAETHDVTNQPPSLDGANLYRIDLPLQQWSQRFGAGWAQARIDAYGA-LAGGPLMEA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN N P ++ G R D VEFHPA+H L+R ++ GL W + AH Sbjct: 62 GFLANQNKPVFSSHDRYGHRIDLVEFHPAYHQLMRTAVEHGLPSLPWAHP-----QPGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T AS+ AL P + + W PK+ + EYDP N K Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFASVPALRLQPDLAEHWVPKVLATEYDPRNVGMAHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTKAYPVGASGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ +A Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQASHHCAHRKVGGKLLSEQPLMQNVLADLALESESA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + D EA +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGRALDHLND-EHEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITI 486 + R YRE+P NS GSGN LDVL L K + E LF L G K++ I Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGMLEVLFRELGD--GHGDKRLAGHIHQ 473 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L + + + AR LTE IA+ A L AG ++++D F+ +R Sbjct: 474 LHAAFKDTDDIQYRARQLTEDIAVGLQAKLLLEAGNSEVSDAFIASRL 521 >gi|293407914|ref|ZP_06651754.1| isovaleryl CoA dehydrogenase [Escherichia coli B354] gi|291472165|gb|EFF14647.1| isovaleryl CoA dehydrogenase [Escherichia coli B354] Length = 547 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 191/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 5 DTVHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+M L+ P +DW + S YD Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 418 PRLYREIPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 518 >gi|218702884|ref|YP_002410513.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39] gi|218372870|emb|CAR20750.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI39] Length = 541 Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 190/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG T + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQQL 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|146310030|ref|YP_001175104.1| isovaleryl CoA dehydrogenase [Enterobacter sp. 638] gi|145316906|gb|ABP59053.1| acyl-CoA dehydrogenase domain protein [Enterobacter sp. 638] Length = 540 Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 194/517 (37%), Positives = 284/517 (54%), Gaps = 9/517 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD +L A+I + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPLPLSNSNLFLSDCALRDAVIREGAEWDIELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y GER D V FHPAWH L++ + +H W E R+ + Sbjct: 59 GRLANANPPELLRYNAAGERLDDVRFHPAWHLLMQGLCANRVHNLAW----EDQARRGSF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L + P+ DW + S YDP Q Sbjct: 115 VARAARFILHAQVEAGTLCPVTMTFAATPLLQQSLPKPFHDWLTPLMSDRYDPHIAPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ +G Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKCSDGSYRLVGHKWFYSVPQSDAHLVLAQAKGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR+L DG N + +RLK+K+GNRSNA+ E EF G++LG+ + M Sbjct: 235 LSCFFVPRILPDGQRNAVRLERLKDKLGNRSNASSEAEFMEASGWILGEEGEGVRQILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L +D A+ S MR +L+ A+++A +R G L+DQP+M+ ++ +AL + TAL Sbjct: 295 GGLTRVDCALGSHGLMRRALSVALYHAHQRQTFGKNLVDQPLMREVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D+ + +E A+AR+ P KY CK +AEAME +GG+GY EE + R Sbjct: 355 LFRLARAWDQ-RQDPKETAWARLFTPAAKYSVCKAGIPFVAEAMEVLGGAGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K + + L Q G + + Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLAKQPAILDVLQEDFAQVKGQDRHFDRSWRQLQQK 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + R +T+ I L + A + R +A + Sbjct: 474 LRKPQESQGREITQLIFLLGAGAQMLRHASPPVAQAW 510 >gi|215489531|ref|YP_002331962.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str. E2348/69] gi|215267603|emb|CAS12058.1| isovaleryl CoA dehydrogenase [Escherichia coli O127:H6 str. E2348/69] Length = 541 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 189/507 (37%), Positives = 278/507 (54%), Gaps = 9/507 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG T + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500 >gi|319793833|ref|YP_004155473.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315596296|gb|ADU37362.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 546 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 193/525 (36%), Positives = 292/525 (55%), Gaps = 28/525 (5%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + ++ L AL N P + L+ LG + S Q AR+AN +TP+ Sbjct: 8 FNQPAPLADYNLFETNRPLRDALKFNAPQLQVAPLQELGVTIGSAEMQTHARLANIHTPE 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + G R D+VEFHP++H L+ ++ GLH + W + H +RAA L Sbjct: 68 LHTHDRFGRRIDEVEFHPSYHVLMSAAVGAGLHGTPWAGT-----SASPHVLRAAGFMLF 122 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +LE L S++ A AL + V+ DW PK+ S YDP K+ K V +G+G+T Sbjct: 123 TELEPSMLCPISMSYAVTPALRSNAAVYADWGPKLTSLWYDPALKSFKDKPGVTMGMGMT 182 Query: 204 EKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 EK+GG+D+ A T+Q + DG Y ++GHKWF S+PM DAF++LAQ + CF Sbjct: 183 EKQGGSDVRANTTQA--VRDGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSCFF 240 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR+L DG+ N + QRLK+K+GN++NA+ E+EF +L+G+ + +M + Sbjct: 241 LPRVLPDGTRNAIHIQRLKDKLGNKANASSEVEFHGASAWLVGEEGRGIPQILEMGTMTR 300 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD A+ + MR +L+ AI++A +R+ G LI+QP+MK +AD+AL+ A+TAL+ RLA Sbjct: 301 LDCALGTSGLMRQALSIAINHASQRNAFGKPLIEQPLMKNVLADLALESEASTALAIRLA 360 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHY 434 +FD E AR++ P+ K+W CK EAMEC+GG+GY+EE +AR Y Sbjct: 361 RAFDYPDDEHER-LMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMARVY 419 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494 RE P NSI G+GN M LD+L L KG + + L ++L + + + R + +L Sbjct: 420 REMPLNSIWEGAGNIMALDLLRGLRKGDAV-----AALTKELAPARGQHAALDRLADALP 474 Query: 495 KEDKGL-----ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + AR L + +ALA A+ L + + F +R Sbjct: 475 ARIEAMASEVEARRLAQDVALAVQASLLAQTAPPAVVGAFCASRL 519 >gi|309796998|ref|ZP_07691398.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7] gi|308119411|gb|EFO56673.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 145-7] Length = 546 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|86739085|ref|YP_479485.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3] gi|86565947|gb|ABD09756.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3] Length = 561 Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 196/511 (38%), Positives = 285/511 (55%), Gaps = 8/511 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +G +A + +LL AL +L LG S A A AN PQL Sbjct: 26 NQPPPLVGHDAAADPALLAALAREGAGWHMDDLHRLGRLAGSEEAARQADEANRFPPQLR 85 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V+FHP+WHAL+ ++ +GL + W +P R AH RAA + + Sbjct: 86 THDRYGFRVDEVDFHPSWHALMEVAVREGLAGAPW---ADP--RPGAHVARAADILVWGT 140 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GHL S+T A + AL P + + P + SR YDP + P K + G+G+TEK Sbjct: 141 VEQGHLCPVSMTYAVVPALRAAPELAARYEPLLTSRVYDPGLRPPEGKAGLLAGMGMTEK 200 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+ DG Y L GHKWF S+PM+D F++LAQ G + CF VPR+L DG Sbjct: 201 QGGSDVRANTTTATPAGDGTYRLRGHKWFTSAPMNDVFLVLAQAPGGLSCFWVPRVLPDG 260 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N RLK+K+GNRSNA+ E EF +T G+L+G+ + +M + LDS++ S Sbjct: 261 VRNTFRIARLKDKLGNRSNASGEPEFDDTVGWLVGEEGAGVRAIIEMVAMTRLDSSLGSA 320 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AK 384 +GMR ++ A H+ R R G LID P+M+ +AD+AL+ AAT L R+A + D A+ Sbjct: 321 AGMRAAVMAAAHHVRHRRAFGRPLIDAPLMRNVLADLALESEAATTLVLRVAGAVDRAAR 380 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +E A+ R+ + KYW CK +PA+ AEA+EC+GG+GY+EE + R YRE+P N I Sbjct: 381 GDRQEQAFGRLAIAVAKYWVCKRSPALAAEALECLGGNGYVEESGMPRLYREAPLNGIWE 440 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LDVL L + F + ++ G+ + LR + K+ + AR Sbjct: 441 GSGNVNALDVLRALTREPASFAAFATEIDAARGADRRLDAAWARLRAVLDRSKDAEFAAR 500 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENR 533 + E++A+ + L R + +AD F R Sbjct: 501 RIVERLAVVLQGSLLVRYAPSAVADAFCATR 531 >gi|15804776|ref|NP_290817.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 EDL933] gi|162139725|ref|NP_313190.3| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|291285599|ref|YP_003502417.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7 str. CB9615] gi|12519175|gb|AAG59383.1|AE005651_12 putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7 str. EDL933] gi|13364640|dbj|BAB38586.1| putative acyl coenzyme A dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|209750138|gb|ACI73376.1| putative acyl coenzyme A dehydrogenase [Escherichia coli] gi|209750140|gb|ACI73377.1| putative acyl coenzyme A dehydrogenase [Escherichia coli] gi|209750142|gb|ACI73378.1| putative acyl coenzyme A dehydrogenase [Escherichia coli] gi|209750144|gb|ACI73379.1| putative acyl coenzyme A dehydrogenase [Escherichia coli] gi|209750146|gb|ACI73380.1| putative acyl coenzyme A dehydrogenase [Escherichia coli] gi|290765472|gb|ADD59433.1| Putative acyl coenzyme A dehydrogenase [Escherichia coli O55:H7 str. CB9615] Length = 546 Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|331656015|ref|ZP_08357003.1| putative acyl-CoA dehydrogenase [Escherichia coli M718] gi|331046369|gb|EGI18459.1| putative acyl-CoA dehydrogenase [Escherichia coli M718] Length = 546 Score = 322 bits (825), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGAYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|218707798|ref|YP_002415317.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026] gi|293402814|ref|ZP_06646911.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412] gi|298378344|ref|ZP_06988228.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302] gi|331665851|ref|ZP_08366745.1| protein AidB [Escherichia coli TA143] gi|218434895|emb|CAR15833.1| isovaleryl CoA dehydrogenase [Escherichia coli UMN026] gi|291429729|gb|EFF02743.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1412] gi|298280678|gb|EFI22179.1| isovaleryl CoA dehydrogenase [Escherichia coli FVEC1302] gi|331056902|gb|EGI28896.1| protein AidB [Escherichia coli TA143] Length = 541 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPMPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASM-VALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+M + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAAMPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|315299068|gb|EFU58322.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 16-3] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 283/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|324005250|gb|EGB74469.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 57-2] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L A+ S L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 477 QQLRKPAEELGREITHRLFLLGCGAQMLK 505 >gi|324019365|gb|EGB88584.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 117-3] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|117626533|ref|YP_859856.1| isovaleryl CoA dehydrogenase [Escherichia coli APEC O1] gi|115515657|gb|ABJ03732.1| putative acyl-CoA dehydrogenase [Escherichia coli APEC O1] gi|315288468|gb|EFU47866.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 110-3] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + L R +T ++ L A + + +A + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 515 >gi|328885969|emb|CCA59208.1| acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 545 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 281/519 (54%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQ P +G + ++SD L L + V +L +LG S QE AN N Sbjct: 10 NQAPPLVGHDVFTSDRALAEAVERHLAPELLTEVRGDLTVLGRAAGSAQLQEWGERANAN 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEF PAWH LL +S+ GL W R H RAA Sbjct: 70 PPRLRTHDRYGHRIDEVEFDPAWHRLLGKSVEAGL-TDAWGR-------PGGHVRRAAGF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 +++Q+EAGH S+T A++ AL P + + W P S Y+ +K V +G+ Sbjct: 122 LVVSQVEAGHGCPLSMTHAAVPALRAEPELAEVWEPAALSHVYERELGPVAEKPGVLLGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 +TEK+GG+D+ A T++ + ++ DG Y L+GHKWF S+PMSDAF++LAQ + CFL+P Sbjct: 182 AMTEKQGGSDVRANTTEARPLAADGEYVLTGHKWFCSAPMSDAFLVLAQAPAGLTCFLLP 241 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-SNTFGFLLGDLNVSTGPVEDMKILIYL 318 R+L DGS N QRLK+K+GNRSNA+ E+EF T+ +G+ + M + Sbjct: 242 RVLADGSRNAFAIQRLKDKLGNRSNASAEVEFDGTTWARRVGEEGRGLRVIMGMVAATRV 301 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR ++A+A+H+ R GG L ++P+M+ +AD+AL+ AAT L RLA Sbjct: 302 DCVLGSAALMRQAVAQAVHHCAHREAFGGPLAEKPLMRNVLADLALESEAATVLGMRLAA 361 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++D +E A RI P KYW K V+AEA+EC+GG+GY+EE + R RESP Sbjct: 362 AYDTGT--PQELALLRIAVPAAKYWVTKRCTPVVAEALECLGGNGYVEESGMPRLLRESP 419 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 NS+ GSGN LDV+ L + + G+ ++ +R ++ + + Sbjct: 420 LNSVWEGSGNVQALDVVRALRTEPAALDAFLREVGAARGAD-HRLDRAIRGVLTELADLE 478 Query: 499 GL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 G+ AR LTE++AL A L R ++AD F R Sbjct: 479 GIEARARRLTERLALVLQGALLVRWAPPEVADAFCAARL 517 >gi|260219466|emb|CBA26311.1| Protein aidB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 560 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 288/518 (55%), Gaps = 33/518 (6%) Query: 41 SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100 +L AL + P + L+ LGE + S Q AR+AN + P LH++ G R D+VEFH Sbjct: 31 ALQSALAFHAPGMDTSALQSLGELMGSRAMQTHARLANTHPPVLHSHDRLGRRVDQVEFH 90 Query: 101 PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS 160 P++HAL+ + GLH S WD P + AH RAA L + E L S+T A Sbjct: 91 PSYHALMDAAAQAGLHGSPWD----PAAGEGAHLRRAAAFMLFIEAEPSILCPISMTYAV 146 Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 + AL P V + WAP + +R YDP K K + +G+G+TEK+GG+D+ A T+Q Sbjct: 147 LPALRGNPAVFEAWAPGLMARAYDPGFKLYRHKRGLTMGMGMTEKQGGSDVRANTTQA-- 204 Query: 221 ISDG------IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED-------GSP 267 I DG + L GHKWF S+PM DAF++LAQ + CF VPR+L D G+ Sbjct: 205 IPDGEDAWGPRFKLLGHKWFFSAPMCDAFLVLAQSPAGLSCFFVPRILPDFADPHSPGTV 264 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N + QRLK+K+GN +NA+ E+EF + +L+G + +M + LD A+ + Sbjct: 265 NAIRIQRLKDKLGNHANASSEVEFQHATAWLVGVEGRGVPQILEMGTMTRLDCALGTTGL 324 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 MR +L+ A+H+ +R G LI+QP+M+ +AD+A++ AA AL+ RLA++FD A S Sbjct: 325 MRQALSIALHHTSQRQAFGKALIEQPLMRNVLADLAIECEAACALAMRLASAFDHA-SDP 383 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE---ERSIARHYRESPANSILL 444 E R++ P+ KYW CK EAMEC+GG+GY+E E ++AR YRE P NSI Sbjct: 384 HELLMGRLLTPVAKYWICKRGATFAQEAMECLGGNGYVEEGGEGTMARIYREMPLNSIWE 443 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL---- 500 G+GN M LD+L L KG + L ++L + + R + SL + + Sbjct: 444 GAGNIMALDLLRALRKGDTA-----AALARELAPARGAHPALDRLAASLPTRVELMATEM 498 Query: 501 -ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 AR L + +ALA AA LY+ + + + F ++R N Sbjct: 499 EARRLAQDVALAVQAALLYQTAPSAVFEAFCDSRLGGN 536 >gi|227886770|ref|ZP_04004575.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972] gi|300987248|ref|ZP_07178077.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1] gi|222035957|emb|CAP78702.1| Protein aidB [Escherichia coli LF82] gi|227836343|gb|EEJ46809.1| isovaleryl CoA dehydrogenase [Escherichia coli 83972] gi|300407725|gb|EFJ91263.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 45-1] gi|307556354|gb|ADN49129.1| acyl-CoA dehydrogenase family protein [Escherichia coli ABU 83972] gi|315293531|gb|EFU52883.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 153-1] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L A+ S L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505 >gi|256019832|ref|ZP_05433697.1| isovaleryl CoA dehydrogenase [Shigella sp. D9] gi|300821280|ref|ZP_07101428.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7] gi|300922406|ref|ZP_07138526.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1] gi|300940674|ref|ZP_07155235.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1] gi|331680317|ref|ZP_08380976.1| putative acyl-CoA dehydrogenase [Escherichia coli H591] gi|332280972|ref|ZP_08393385.1| isovaleryl CoA dehydrogenase [Shigella sp. D9] gi|300421225|gb|EFK04536.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 182-1] gi|300454562|gb|EFK18055.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 21-1] gi|300526169|gb|EFK47238.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 119-7] gi|331071780|gb|EGI43116.1| putative acyl-CoA dehydrogenase [Escherichia coli H591] gi|332103324|gb|EGJ06670.1| isovaleryl CoA dehydrogenase [Shigella sp. D9] Length = 546 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|170766651|ref|ZP_02901104.1| acyl-CoA dehydrogenase family protein [Escherichia albertii TW07627] gi|170124089|gb|EDS93020.1| acyl-CoA dehydrogenase family protein [Escherichia albertii TW07627] Length = 541 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/522 (36%), Positives = 283/522 (54%), Gaps = 9/522 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ S L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ VR A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + A+++ +RHV G LI+QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L K + L R +T ++ L A + + +A + + F Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQMMF 515 >gi|91213736|ref|YP_543722.1| isovaleryl CoA dehydrogenase [Escherichia coli UTI89] gi|237703855|ref|ZP_04534336.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA] gi|91075310|gb|ABE10191.1| putative acyl-CoA dehydrogenase [Escherichia coli UTI89] gi|226901767|gb|EEH88026.1| isovaleryl CoA dehydrogenase [Escherichia sp. 3_2_53FAA] Length = 547 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 5 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + L R +T ++ L A + + +A + Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 516 >gi|331671340|ref|ZP_08372138.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280] gi|331071185|gb|EGI42542.1| putative acyl-CoA dehydrogenase [Escherichia coli TA280] Length = 546 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRHLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG T + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGTRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRL ++D ++ ++EA +AR+ P K+ CK ++AEAME +GG GY EE + Sbjct: 358 ALLFRLVRAWDR-RADAKEALWARLFTPAVKFVICKRGMPLVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T K+ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHKLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|254037206|ref|ZP_04871283.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43] gi|226840312|gb|EEH72314.1| isovaleryl CoA dehydrogenase [Escherichia sp. 1_1_43] Length = 546 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFLEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|134094276|ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB protein [Herminiimonas arsenicoxydans] gi|133738179|emb|CAL61224.1| isovaleryl CoA dehydrogenase [Herminiimonas arsenicoxydans] Length = 551 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 188/525 (35%), Positives = 290/525 (55%), Gaps = 18/525 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE--LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N Y+SD L A + + H++ + E + T Q L ++AN++ P+ Sbjct: 10 NQAPDLHDYNLYTSDLALAAGVQREQAGWHEQDLIRYGAELGMQQTLQ-LGQLANHHLPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + G R D VEFHP+WH LL + LH W ++ R H R A YL Sbjct: 69 LHTHDRFGHRIDTVEFHPSWHQLLAMQRRENLHAMPWSQA-----RAGVHVARTAAYYLQ 123 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T A++ L P + K+F+RE+DP + QK S+ IG+G+T Sbjct: 124 AQVESGSLCPTTMTFAAIPLLQQEPALFAALQAKLFAREHDPRDLPWAQKHSMLIGMGMT 183 Query: 204 EKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ + T+ + + Y L+GHKWF S+PM DA ++LA+ E + CF VP Sbjct: 184 EKQGGSDVRSNTTVARAVHGSGRGADYALTGHKWFFSAPMCDAHLVLARTENGLSCFFVP 243 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N + Q+LK+K+GNRSN++ E+EF + +G ++G+ + +M LD Sbjct: 244 RWRPDGSRNAVLIQQLKDKLGNRSNSSSEVEFQDAYGVMVGEEGRGIPTIIEMANHTRLD 303 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S MR +L +AIH+AR R G L +QP+M+ ++D+AL+ AAT L RLA + Sbjct: 304 CVIGSAGLMRNALVQAIHHARHRSAFGHPLAEQPLMRNVLSDLALESEAATLLMLRLARA 363 Query: 380 FDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 D ++ + E A+ RI+ P K+W CK E ME GG+GYIE +AR +RE Sbjct: 364 ADASRDAPDDLLERAWRRILTPAAKFWVCKRVLEFSGECMEVWGGNGYIENAPMARMFRE 423 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 +P NSI GSGN M LDVL +E+ F L L+ G+ + +I L + ++L Sbjct: 424 APVNSIWEGSGNVMCLDVLRAIEREAEGFALLLQNLQDSAGTHAGLRALIASLHNDLALP 483 Query: 495 KEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNC 538 + + + AR +++ LA+ A+ + + +A+ F+ +R C Sbjct: 484 PQQQEMQARRFAQRLVLAAQASLMLQHAPASVAEAFIASRIDAEC 528 >gi|26251082|ref|NP_757122.1| isovaleryl CoA dehydrogenase [Escherichia coli CFT073] gi|26111514|gb|AAN83696.1|AE016771_207 AidB protein [Escherichia coli CFT073] Length = 547 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/509 (37%), Positives = 278/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L A+ S L +G+ + + + Sbjct: 5 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 478 QQLRKPAEELGREITHQLFLLGCGAQMLK 506 >gi|300918352|ref|ZP_07134953.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1] gi|300414484|gb|EFJ97794.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 115-1] Length = 546 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|110644544|ref|YP_672274.1| isovaleryl CoA dehydrogenase [Escherichia coli 536] gi|300988635|ref|ZP_07178775.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1] gi|110346136|gb|ABG72373.1| AidB protein [Escherichia coli 536] gi|300305868|gb|EFJ60388.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 200-1] gi|324013830|gb|EGB83049.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 60-1] Length = 546 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 189/509 (37%), Positives = 279/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505 >gi|300928003|ref|ZP_07143556.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1] gi|301646634|ref|ZP_07246500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1] gi|300463954|gb|EFK27447.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 187-1] gi|301075181|gb|EFK89987.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 146-1] Length = 546 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|332525870|ref|ZP_08402011.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332109421|gb|EGJ10344.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 550 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 198/527 (37%), Positives = 285/527 (54%), Gaps = 15/527 (2%) Query: 17 QPSDSLFALNQPPLFIGM-----NAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTA 70 P+DS+ A +G +AY +D+ LV A++ + EL G + Sbjct: 2 NPNDSVLAETHEVFNVGAELPDHDAYRADAALVEAVVREGAAWADDELSAFGRLTGAAAY 61 Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 +EL AN + P+L + G R D V FHPA+H L+R +I GLH + R Sbjct: 62 RELGTEANRHPPELDTHDRFGRRVDLVRFHPAYHTLMRTAIEHGLHSAP-----HTAPRP 116 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 AH RAA+ YL +Q+EAGH ++T AS+ L TTP + + W P+I +R YDP N Sbjct: 117 GAHVARAAKFYLQSQVEAGHGCPVTMTFASVPTLRTTPALAEAWLPRITARVYDPRNVPD 176 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 QK V IG+ +TEK+GG+D+ A T+Q + + G+Y L GHK+F+S+PM DAF++LAQ Sbjct: 177 AQKAGVTIGMAMTEKQGGSDVRANTTQARPAGAGGVYELVGHKYFVSAPMCDAFLVLAQA 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G + CFL+PR DG+ N L RLK K+GN SNA+ E E + +GD + Sbjct: 237 PGGLSCFLLPRWRPDGTKNALQLLRLKRKMGNVSNASSETELRGALAWRVGDEGRGVRTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M D + S +G R + A A+H+A R G L +QP+M+ +AD+AL+ A+ Sbjct: 297 IEMVACTRFDCMVGSSAGQRAAAALALHHATLRSAFGRRLAEQPLMQNVLADLALESEAS 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL+ RLA + D + E A R+ I KYW CK A AEAMECIGGSG +E+ Sbjct: 357 LALTMRLARAMD-TPGDAHEQALLRLGTAIGKYWVCKRTAAHAAEAMECIGGSGVMEDSP 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITIL 487 R YRE+P N+I GSGN LD+L EK F+ L G+ + + + L Sbjct: 416 FPRLYREAPVNAIWEGSGNVQCLDMLRAAEKAPAALHAFFAELAPARGADRRLDRWVAAL 475 Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +D + + + AR L +++ALA A+ L R +AD F +R Sbjct: 476 QDEFAELSDLEFRARGLVDRMALALQASLLVRHAPAAVADAFCASRL 522 >gi|296157425|ref|ZP_06840260.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295892197|gb|EFG71980.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 561 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 198/568 (34%), Positives = 303/568 (53%), Gaps = 28/568 (4%) Query: 9 RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLS 67 R + Q H+ + NQ P N +SSD+ L A + + H++ L G + + Sbjct: 3 RHSFGQTHEVT------NQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTT 56 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 LA +AN +TP+L + P GER D +EFH +WH LL +GLH + +P Sbjct: 57 PETLALAELANRHTPELFTHSPRGERIDALEFHASWHTLLSLLRREGLHALPFS---DP- 112 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187 ++ A R A +L AQ+E+G L ++T AS+ L P + K+++RE+DP + Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRD 171 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243 K S IG+G+TEK+GG+D+ + ++ + Y L GHKWF S+P DA Sbjct: 172 IPLTHKNSAMIGMGMTEKQGGSDVRSNQTRAYATAGRGRGAAYRLVGHKWFFSAPQCDAH 231 Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 ++L + + G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + FG ++GD Sbjct: 232 LVLGRTDDHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + +M LD I S + MR +L +AIH+AR R G L DQP+M+ +AD Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351 Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AL+ AAT L RLA +F+E A + E A+ RI+ P KYW CK A EAME Sbjct: 352 LALESEAATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + + LF+ + + Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAAQALFAGWQMEAQ 471 Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + +L + + AR + +++ L + A L ++A+ F+ R Sbjct: 472 AHPALSAALGKLAAALNGPAEHREASARRIAQQVVLIAQATLLLEHAPGEVAEAFIATRL 531 Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559 D C + + L F+ A I++ + Sbjct: 532 ADGCGESGRVYGTLPAAFDHAAIVERAF 559 >gi|300949153|ref|ZP_07163195.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1] gi|300451401|gb|EFK15021.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 116-1] Length = 546 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DSVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|323189934|gb|EFZ75212.1| protein aidB [Escherichia coli RN587/1] Length = 541 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDALLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|300816512|ref|ZP_07096733.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1] gi|300906017|ref|ZP_07123741.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1] gi|301302604|ref|ZP_07208734.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1] gi|301325951|ref|ZP_07219372.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1] gi|300402184|gb|EFJ85722.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 84-1] gi|300530742|gb|EFK51804.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 107-1] gi|300842129|gb|EFK69889.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 124-1] gi|300847304|gb|EFK75064.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 78-1] gi|315255532|gb|EFU35500.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 85-1] Length = 546 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|323946036|gb|EGB42073.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli H120] Length = 541 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P + +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPALFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|323965574|gb|EGB61028.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli M863] gi|327250128|gb|EGE61847.1| protein aidB [Escherichia coli STEC_7v] Length = 541 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/522 (36%), Positives = 282/522 (54%), Gaps = 9/522 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLTEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L K + + R +T ++ L A + + +A + + F Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQMMF 515 >gi|121609781|ref|YP_997588.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554421|gb|ABM58570.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 559 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 199/540 (36%), Positives = 300/540 (55%), Gaps = 35/540 (6%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQEL 73 P+ + NQ ++ +N ++++ L + A+ P L LG + S QE Sbjct: 5 PASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTW---LSALGAEMGSAQMQEH 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 AR+AN + PQLH + G+R D VEFHP++HAL+ ++ GLH + W R+ AH Sbjct: 62 ARLANTHKPQLHTHDRFGQRSDMVEFHPSYHALIGAALRHGLHATAWTRT--GAAATHAH 119 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RAA L + E L S++ A + AL + DW + YDP QK Sbjct: 120 TERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADWHTGLAGTRYDPRLVPYTQK 179 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLA 247 +++ +G+G+TEK+GG+D+ A T+Q ++DG Y L+GHKWF S+PM DAF++LA Sbjct: 180 SALTMGMGMTEKQGGSDVRANTTQA--LADGADAWGPRYRLTGHKWFFSAPMCDAFLVLA 237 Query: 248 QVEGRVGCFLVPRLL---EDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 Q G + CF +PR+L EDG+ N L QRLK+K+GN +NA+ E+EF + + +G+ Sbjct: 238 QAPGGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEE 297 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M I+ LD A+ + MR +LA A+++AR+R G LIDQP+M+ +AD+ Sbjct: 298 GRGVAQILEMGIMTRLDCALGTSGLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADL 357 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL+ AATALS RLA++FD + EA AR++ P+ K+W CK EAMEC+GG+ Sbjct: 358 ALESEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVCKRGSVFAQEAMECLGGN 417 Query: 423 GYIEE---RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GY+EE ++AR YRE P NSI G+GN M LD+L L + + + L +L + Sbjct: 418 GYVEEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSA-----AALADELAPA 472 Query: 480 --GKKVITILRDSISLCKEDKG---LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + ++ L E G AR L + +ALA AA LYR+ + F +R Sbjct: 473 RGAHPALDRMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRL 532 >gi|300023177|ref|YP_003755788.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524998|gb|ADJ23467.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 541 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 211/539 (39%), Positives = 298/539 (55%), Gaps = 18/539 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP N + SD++L A S L+ LG + S L AN NTP L Sbjct: 6 NQPPPLEDYNLFDSDAVLREAAGREGASWAESSLQALGARLGSADVIALGAEANRNTPTL 65 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ G R D+V+FHP+WHALL ++ GLH S W EP ++ AH RAA +++A Sbjct: 66 RAFDRSGARIDEVDFHPSWHALLGLAMEAGLHSSPW---AEP--KRGAHVARAAGCFMLA 120 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E+G S+T ++ L P V DW P+IFSR YDP + +KTS IG+ +TE Sbjct: 121 QIESGVYCPVSMTYGAVPTLKRAPHVAADWLPRIFSRSYDPRFRPAHEKTSALIGMAMTE 180 Query: 205 KRGGTDIAAITSQGQ-KISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +GG+D+ A S+ + +DG Y L+GHKWF+S+PM DAF+MLAQ + CFLVPR Sbjct: 181 NQGGSDLRANVSRAEFSEADGERRYYRLNGHKWFMSAPMCDAFLMLAQTDAGPTCFLVPR 240 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DG+ N + +RLK+K+GNRSNA+ E+E N LLGD + +M LD Sbjct: 241 WKPDGTRNAIHIRRLKDKLGNRSNASSEVELENAHAELLGDEGRGIPTIIEMGNYTRLDC 300 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S MR ++A+AIH+AR R L+D +M +AD+A++ AA L+ RLA ++ Sbjct: 301 VIGSSGLMRQAVAQAIHHARYRTTFQKHLVDHALMSNVLADLAIEAEAAALLALRLARAY 360 Query: 381 DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 DE SEEA + R++ P K+W CK APA AEAME +GG+GY+E+ +AR YRE P Sbjct: 361 DE---DSEEALTFRRVVTPAAKFWICKRAPAFAAEAMEVLGGNGYVEDFGLARIYREVPV 417 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKED 497 NSI GSGN M LDVL + K L + +D ++ +++ L + + D Sbjct: 418 NSIWEGSGNIMCLDVLRAIAKAPLAAAVLADEM-RDAATADRRLAQFLARMQATATSIGD 476 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + AR + +A A+ L R +AD F +R LD ML + I++ Sbjct: 477 EAQARVFVRDLVIALQASLLIRHAPQIVADAFCASR-LDGGSGAFGMLPPGVDTRRIVE 534 >gi|74314668|ref|YP_313087.1| isovaleryl CoA dehydrogenase [Shigella sonnei Ss046] gi|73858145|gb|AAZ90852.1| putative acyl coenzyme A dehydrogenase [Shigella sonnei Ss046] Length = 546 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|293476498|ref|ZP_06664906.1| acyl-CoA dehydrogenase [Escherichia coli B088] gi|291320951|gb|EFE60393.1| acyl-CoA dehydrogenase [Escherichia coli B088] Length = 547 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 5 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 477 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 478 QQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 518 >gi|331644935|ref|ZP_08346052.1| putative acyl-CoA dehydrogenase [Escherichia coli H736] gi|331035910|gb|EGI08148.1| putative acyl-CoA dehydrogenase [Escherichia coli H736] Length = 546 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|330818629|ref|YP_004362334.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3] gi|327371022|gb|AEA62378.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3] Length = 557 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 198/541 (36%), Positives = 294/541 (54%), Gaps = 17/541 (3%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70 M+Q H P + NQ P NA+ +D L A + + H+ L G + + Sbjct: 1 MDQ-HVPVATHRVTNQAPPLTDYNAFETDLALAAAVERHGAGWHQTALSRHGAALTTADT 59 Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 LA +AN +TP+L + GER D +EFHP+WH LL +GLH + EP R Sbjct: 60 LALAELANRHTPELSTHSARGERIDALEFHPSWHQLLALLRGEGLHALPFA---EP--RA 114 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A R A +L AQLE+G L ++T AS+ L P + ++++RE+DP + Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLKKEPALFDTLRERLYTREHDPRDIPL 174 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIML 246 K S+ IG+G+TEK+GG+D+ + ++ + G Y L GHKWF S+P DA ++L Sbjct: 175 AGKRSMMIGMGMTEKQGGSDVRSNETRAWPLGAGGRGQPYRLVGHKWFFSAPQCDAHLVL 234 Query: 247 AQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 A+ + G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G ++G+ Sbjct: 235 ARTDEHAGISCFYVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLDAYGVMVGEEGR 294 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M + LD I S + MR +L +AIH+AR R G +L +QP+M+ +AD+A+ Sbjct: 295 GVPTIIEMANMTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLAI 354 Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AAT L RLA++ + S EA + RI+ P K+W CK A EAME GG+G Sbjct: 355 ESEAATMLFMRLADAVEHDDGSSAEARGWRRIVTPAAKFWVCKRAIEFTGEAMEVWGGNG 414 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK-- 481 Y+E +AR YRE+P NSI GSGN M LDVL +E+ L + + + Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAVERQPESAAALVAAWREAAAGHPELL 474 Query: 482 KVITILRDSISLCKEDK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 + I L D+ +L E++ AR + ++IAL + A+ L R +AD F+ R H Sbjct: 475 RAIDQLLDAFALPAEEREASARRIAQRIALIAQASLLIRHAPAAMADAFIATRLGAASHD 534 Query: 541 T 541 T Sbjct: 535 T 535 >gi|320193567|gb|EFW68204.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli WV_060327] Length = 541 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ S L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYLLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|332992135|gb|AEF02190.1| acyl-CoA dehydrogenase [Alteromonas sp. SN2] Length = 562 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 278/519 (53%), Gaps = 19/519 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSV---VHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + D LL A++AN S V +L++ G+ V E +AN N Sbjct: 22 NQPLPLPAYNLWQDDPLLKCAVMANVTSPHADVALQLDVFGQ-VAGFELMEHGELANKNK 80 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+ H + G R D V FHP++HAL+ ++ +H W + + AH IRAA ++ Sbjct: 81 PEFHPFDRYGRRIDDVAFHPSYHALMSAAMQGNVHNYSWQNESQ----QGAHVIRAALIF 136 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 + Q +AG ++T A++ AL + W K+ +YD K ++IG+G Sbjct: 137 MQYQADAGTTCPLTMTHAAIPALRQAKGLPDYWVNKVVHGQYDDRTLPAEHKHGLSIGMG 196 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 +TEK+GG+D+ T+ K DG Y + GHK+F S+PM D ++LAQ +GCFL+PR+ Sbjct: 197 MTEKQGGSDVRRNTTTATKQEDGSYRIVGHKFFFSAPMCDGHLILAQTGAGLGCFLLPRV 256 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 + DG+ N + QRLK+K+G+ SNA+ E+EF +L+G+ + DM L LD Sbjct: 257 MPDGTLNEVRIQRLKDKLGDWSNASSEVEFQGATAYLIGEEGKGVRVIIDMVSLTRLDCM 316 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 I S + MR L +A H+ R G LIDQP+M+ IAD+ L+ A+ AL+ R+A + D Sbjct: 317 IGSSATMRQGLVQAYHHVSNREAFGATLIDQPLMQNVIADLTLECTASLALTMRVARAVD 376 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 +K+ +EAA ARI I KYW CK PA I EA EC+GG GY+EE + R YR++P NS Sbjct: 377 ASKTNPKEAALARIATAIGKYWICKRTPAFINEAQECLGGIGYVEENILPRLYRQAPLNS 436 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCK 495 I GSGN LDVL L K LF L G + + ++ D+ +L Sbjct: 437 IWEGSGNVQCLDVLRALHKEPESKAALFDLLHSAKGRNACYDNHLQSLLDAFEDTATL-- 494 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + +R +TE A+A A L + +A+ F E R Sbjct: 495 --EIRSRLITEHTAIAMQGALLLNESDSVMANTFCEARL 531 >gi|224826360|ref|ZP_03699462.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224601461|gb|EEG07642.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 541 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 204/528 (38%), Positives = 278/528 (52%), Gaps = 20/528 (3%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ------ 71 P + LNQPP + N +SSD +A VV + E + C A Sbjct: 2 PPSAREVLNQPPPLVDYNLFSSD------VALQEGVVREGAAWAREPLFDCGALLGRRDS 55 Query: 72 -ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 EL R+AN P LH + G R D+VEFHPAWH L+R + GLHC+ W+ EP R Sbjct: 56 FELGRLANRYPPLLHGFDAQGFRLDEVEFHPAWHTLMRGIVERGLHCAPWE---EP--RP 110 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 AH RAA L AQ+EAG L ++T ++ L + DW P + S +YD + Sbjct: 111 GAHVARAAAFLLQAQVEAGTLCPTTMTFGAIPVLSQHAGLTLDWLPTLCSHDYDERDLPL 170 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK +G+G+TEK+GG+D+ T++ + +DG Y LSGHKWF S P SDA ++LAQ Sbjct: 171 AQKHGGLVGMGMTEKQGGSDVRTNTTRAEPCADGSYRLSGHKWFFSVPQSDAHLVLAQAP 230 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF +PR L DG+ N +C RLK+K+GNRSNA+ E EF + LLG+ + Sbjct: 231 GGLSCFFLPRWLPDGTRNAVCLLRLKDKLGNRSNASAEAEFDAAYAVLLGEEGRGVPLIL 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +M D + S MR LA+A+H+ R R G LI+QP+M +AD+AL+ AA Sbjct: 291 EMGGHTRFDCLLGSAGMMRQVLAQAVHHCRHRRAFGHRLIEQPLMLNVLADMALETEAAI 350 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL+ RLA + D E R++ P KYW CK P + AEAME +GG+GY+ E Sbjct: 351 ALALRLARAADAPDDEG-EMLLRRLLVPAGKYWVCKRGPELAAEAMEVLGGNGYMAESVA 409 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 AR Y E P NSI GSGN M LDVL L K + L + L Q G + R S Sbjct: 410 ARAYAEMPVNSIWEGSGNVMCLDVLRTLAKHPRARDMLLAELAQVPGCHPLYRHALGRLS 469 Query: 491 ISLCKE-DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 L + + AR L ++ L A L R +A+ F +R ++ Sbjct: 470 DQLQRPVAEADARHLVRRMVLLVQAGLLLRHAPEALAEAFCASRLGED 517 >gi|331681206|ref|ZP_08381843.1| protein AidB [Escherichia coli H299] gi|331081427|gb|EGI52588.1| protein AidB [Escherichia coli H299] Length = 541 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|152980833|ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] gi|151280910|gb|ABR89320.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] Length = 547 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 194/544 (35%), Positives = 293/544 (53%), Gaps = 18/544 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P + N +S DS+LV I N S EL LG + + +L ++AN + P+L Sbjct: 10 NQVPELLDYNLFSCDSVLVTAIKNSAASWYAPELAALGAALGTRETLQLGQLANQHLPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V+FHP+WH LL LH W + R AH R A YL A Sbjct: 70 QTHDRFGNRIDRVDFHPSWHQLLAMQRRASLHALPWSQP-----RAGAHIARTAAYYLQA 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E+G L ++T A++ L P + K+FS +D + K S+ +G+G+TE Sbjct: 125 QVESGSLCPVTMTFAAIPLLQQEPALFATLKDKLFSTGHDERDLPLPDKASMLVGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GG+D+ + T+ + + Y L+GHKWF S+PM DA ++LA+ E + CF VPR Sbjct: 185 KQGGSDVRSNTTVARPLESAGRGQPYALTGHKWFFSAPMCDAHLVLARTEAGLSCFFVPR 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DGS N + QRLK+K+GNRSN++ E+EF + +G ++G+ + +M LD Sbjct: 245 WRPDGSKNAILIQRLKDKLGNRSNSSSEVEFQDAYGVMVGEDGRGIPTIIEMANHTRLDC 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S MR +L +AIH+AR RH G L +Q +M+ +AD+AL+ AAT L RLA + Sbjct: 305 VIGSTGLMRNALVQAIHHARHRHAFGLPLAEQALMQNVLADLALESEAATRLMLRLAQA- 363 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 EA E A+ R++ P K+W CK A E ME GG+GY+E +AR YRE+P N Sbjct: 364 AEAIDDPVERAWRRVVTPAAKFWICKRALEFTGECMEVWGGNGYVENAPMARMYREAPVN 423 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFE----QLFSTLEQDLGSSGKKVITILRDSISLCKE 496 SI GSGN M LDVL + K + F+ L ++D G +++I LR ++L Sbjct: 424 SIWEGSGNVMCLDVLRAIAKEADAFKLLLDALLDIAKEDKGL--RELIAELRTDLALPAT 481 Query: 497 DKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + + AR T+++ L + + + +A +IAD F+ +R + L A I+ Sbjct: 482 QQEMQARRFTQRLVLVAQSCLMLQAAPANIADAFISSRLDAESGRVYGTLAAPLAAKEIL 541 Query: 556 DSLY 559 + + Sbjct: 542 ERAW 545 >gi|312963212|ref|ZP_07777696.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6] gi|311282478|gb|EFQ61075.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6] Length = 551 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/526 (37%), Positives = 277/526 (52%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G + Sbjct: 3 LHQFAETHDVTNQPPSLDGTNLYRIDLPLQDWSRRFGAGWAEPRIDAYGA-LAGGPLMAA 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN N P +++ G R D VEFHPA+H L+R ++ GL W V H Sbjct: 62 GFLANQNKPVFNSHDRYGHRIDWVEFHPAYHELMRTAVEHGLPSLPWAHPQSGV-----H 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RAA YL +Q EAG ++T A + AL P + K W PKI S YDP N K Sbjct: 117 VARAAMTYLHSQAEAGTGCPLTMTFACVPALRLQPDLAKTWLPKILSTHYDPRNVGIAHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV 249 IG+ +TEK+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGATIGMAMTEKQGGTDVRANTTRAYPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 DKGLTCFLLPRHRPDDTRNQFYIQRLKNKLGNCSNASSEVEFRGAVAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQASHHCAHRTVGGRVLSEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + D +EA +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSMRMGRALDHLGD-EQEAKFARLVTAVGKYWICKRAPAMINEAAECMGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVITILR 488 + R YRE+P NS GSGN LDVL L K + E LF L G + I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLEALFVELGDGHGDRPLARRIEQLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + AR LTE IA+A A L AG ++D F+ +R Sbjct: 476 AGFMDTQDIQYRARQLTEDIAVALQAKLLLEAGNAAVSDGFIASRL 521 >gi|110808102|ref|YP_691622.1| isovaleryl CoA dehydrogenase [Shigella flexneri 5 str. 8401] gi|110617650|gb|ABF06317.1| putative acyl coenzyme A dehydrogenase [Shigella flexneri 5 str. 8401] gi|332749331|gb|EGJ79752.1| protein aidB [Shigella flexneri 4343-70] gi|333009036|gb|EGK28492.1| protein aidB [Shigella flexneri K-218] Length = 541 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|157163652|ref|YP_001460970.1| isovaleryl CoA dehydrogenase [Escherichia coli HS] gi|157069332|gb|ABV08587.1| acyl-CoA dehydrogenase family protein [Escherichia coli HS] Length = 541 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMTFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|194434588|ref|ZP_03066845.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012] gi|194417173|gb|EDX33285.1| acyl-CoA dehydrogenase family protein [Shigella dysenteriae 1012] gi|332083670|gb|EGI88888.1| protein aidB [Shigella dysenteriae 155-74] Length = 541 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|168751461|ref|ZP_02776483.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4113] gi|168754758|ref|ZP_02779765.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4401] gi|168760429|ref|ZP_02785436.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4501] gi|168766466|ref|ZP_02791473.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4486] gi|168774100|ref|ZP_02799107.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4196] gi|168780619|ref|ZP_02805626.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4076] gi|168784824|ref|ZP_02809831.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC869] gi|168801842|ref|ZP_02826849.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC508] gi|195935977|ref|ZP_03081359.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. EC4024] gi|208808434|ref|ZP_03250771.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4206] gi|208812533|ref|ZP_03253862.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4045] gi|208820724|ref|ZP_03261044.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4042] gi|209399702|ref|YP_002273729.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4115] gi|217326338|ref|ZP_03442422.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. TW14588] gi|254796206|ref|YP_003081043.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. TW14359] gi|261225307|ref|ZP_05939588.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. FRIK2000] gi|261255441|ref|ZP_05947974.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. FRIK966] gi|187770307|gb|EDU34151.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4196] gi|188014520|gb|EDU52642.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4113] gi|189001861|gb|EDU70847.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4076] gi|189357896|gb|EDU76315.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4401] gi|189364227|gb|EDU82646.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4486] gi|189368913|gb|EDU87329.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4501] gi|189374887|gb|EDU93303.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC869] gi|189376069|gb|EDU94485.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC508] gi|208728235|gb|EDZ77836.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4206] gi|208733810|gb|EDZ82497.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4045] gi|208740847|gb|EDZ88529.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4042] gi|209161102|gb|ACI38535.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. EC4115] gi|217322559|gb|EEC30983.1| acyl-CoA dehydrogenase family protein [Escherichia coli O157:H7 str. TW14588] gi|254595606|gb|ACT74967.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. TW14359] gi|320190681|gb|EFW65331.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli O157:H7 str. EC1212] gi|320638945|gb|EFX08591.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. G5101] gi|320644314|gb|EFX13379.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. 493-89] gi|320649632|gb|EFX18156.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H- str. H 2687] gi|320655028|gb|EFX22989.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660535|gb|EFX27996.1| isovaleryl CoA dehydrogenase [Escherichia coli O55:H7 str. USDA 5905] gi|320665804|gb|EFX32841.1| isovaleryl CoA dehydrogenase [Escherichia coli O157:H7 str. LSU-61] gi|326345481|gb|EGD69224.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli O157:H7 str. 1125] gi|326346662|gb|EGD70396.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli O157:H7 str. 1044] Length = 541 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDCAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|191165665|ref|ZP_03027505.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A] gi|193070891|ref|ZP_03051823.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019] gi|218556739|ref|YP_002389653.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1] gi|260858340|ref|YP_003232231.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str. 11368] gi|260870905|ref|YP_003237307.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str. 11128] gi|331671092|ref|ZP_08371925.1| protein AidB [Escherichia coli TA271] gi|190904360|gb|EDV64069.1| acyl-CoA dehydrogenase family protein [Escherichia coli B7A] gi|192955837|gb|EDV86308.1| acyl-CoA dehydrogenase family protein [Escherichia coli E110019] gi|218363508|emb|CAR01162.1| isovaleryl CoA dehydrogenase [Escherichia coli IAI1] gi|257756989|dbj|BAI28491.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O26:H11 str. 11368] gi|257767261|dbj|BAI38756.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O111:H- str. 11128] gi|323155996|gb|EFZ42158.1| protein aidB [Escherichia coli EPECa14] gi|323176054|gb|EFZ61646.1| protein aidB [Escherichia coli 1180] gi|331061681|gb|EGI33607.1| protein AidB [Escherichia coli TA271] Length = 541 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|331660762|ref|ZP_08361694.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206] gi|331051804|gb|EGI23843.1| putative acyl-CoA dehydrogenase [Escherichia coli TA206] Length = 541 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 282/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHRLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|187925733|ref|YP_001897375.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187716927|gb|ACD18151.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 561 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 200/568 (35%), Positives = 302/568 (53%), Gaps = 28/568 (4%) Query: 9 RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLS 67 R + Q H+ + NQ P N +SSD+ L A + + H+ L G + + Sbjct: 3 RHSFGQTHEVT------NQVPPLADYNLFSSDAALSAALERDGAGWHRGALVRHGAALTT 56 Query: 68 CTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 LA +AN + P+L + P GER D +EFHP+WHALL +GLH + +P Sbjct: 57 PETLALAELANRHEPELVTHSPRGERIDALEFHPSWHALLSLLRREGLHALPFS---DP- 112 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN 187 ++ A R A +L AQ+E+G L ++T AS+ L P + K+++RE+D + Sbjct: 113 -QRGAMVARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDSRD 171 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAF 243 QKTS IG+G+TEK+GG+D+ + ++ + Y L GHKWF S+P DA Sbjct: 172 LPLKQKTSAMIGMGMTEKQGGSDVRSNQTRAYSTAGSGRGAAYRLVGHKWFFSAPQCDAH 231 Query: 244 IMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 ++L + + G CF VPR DG N + QRLK+K+GNRSNA+ E+EF + FG ++GD Sbjct: 232 LVLGRTDEHEGLSCFYVPRFAPDGRKNNVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGD 291 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + +M LD I S + MR +L +AIH+AR R G L DQP+M+ +AD Sbjct: 292 EGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLAD 351 Query: 362 IALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AL+ AAT L RLA +F+E A + E A+ RI+ P KYW CK A EAME Sbjct: 352 LALESEAATVLFMRLARAFEESTDAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAME 411 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + LF+ D Sbjct: 412 VWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAAWHADAQ 471 Query: 478 SSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + +L + + AR + +++ L + A L + ++A+ F+ R Sbjct: 472 AHPALSAALGKLAATLNGPAEHREASARRIAQQVVLIAQATLLLKHAPAEVAEAFVATRL 531 Query: 535 LDNCHST---HCMLHGRFNAAHIIDSLY 559 + C + + L F+ A II+ + Sbjct: 532 AEGCGESGRVYGTLPATFDHAAIIERAF 559 >gi|111021227|ref|YP_704199.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110820757|gb|ABG96041.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 545 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/535 (35%), Positives = 287/535 (53%), Gaps = 8/535 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +NQ P + +A +L AL V +EL +G S AQ +A + P L Sbjct: 8 VNQVPPLVNFDAADYPPILEALQREGAHDVLEELHDVGRLAGSEDAQRWGDLAEAHPPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VE+ PA+H L+ ++ GLH + W +P R AH +RAA++ + Sbjct: 68 RTHDRYGNRIDEVEYDPAYHQLMTTAVEMGLHGAPW---ADPHPR--AHLVRAAKMAVWG 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q++AGH S+T A + AL + + + P + +R YDP P+ K + G+ +TE Sbjct: 123 QVDAGHGCPISMTYAVVPALRHNRELAQQYEPPLTARVYDPALHPPLTKAGLIAGMSMTE 182 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ SDG Y L+GHKWF S+PMSD F++LAQ G + CF +PR+L D Sbjct: 183 KQGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLK+K+GN SNA+ E+E+ +L+G+ + +M + LD I + Sbjct: 243 GTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRLDCTIGT 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +GMRV A+A H+A R G L+DQP+M+ +AD+A++ AAT ++ LA D A Sbjct: 303 ATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAALTDRAT 362 Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A RI ++KY+ CK P AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 363 AGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVW 422 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED--KGLA 501 GSGN LD L + K + F L+ G+ + + S D + A Sbjct: 423 EGSGNVAALDTLRAMAKQPETLQVFFDELDSTAGADARLDAAVADLKASFGDRDTLEHRA 482 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + +ALA + L R G +AD F +R + + L + A IID Sbjct: 483 RRVVGDMALALQGSLLIRHGHPAVADAFCVSRLSGDWGTVFGTLPTGVDTAAIID 537 >gi|157158060|ref|YP_001465687.1| isovaleryl CoA dehydrogenase [Escherichia coli E24377A] gi|193066012|ref|ZP_03047070.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22] gi|194426602|ref|ZP_03059156.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171] gi|260847017|ref|YP_003224795.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str. 12009] gi|307314865|ref|ZP_07594457.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W] gi|157080090|gb|ABV19798.1| acyl-CoA dehydrogenase family protein [Escherichia coli E24377A] gi|192926335|gb|EDV80971.1| acyl-CoA dehydrogenase family protein [Escherichia coli E22] gi|194415341|gb|EDX31609.1| acyl-CoA dehydrogenase family protein [Escherichia coli B171] gi|257762164|dbj|BAI33661.1| isovaleryl CoA dehydrogenase AidB [Escherichia coli O103:H2 str. 12009] gi|306905668|gb|EFN36197.1| acyl-CoA dehydrogenase domain protein [Escherichia coli W] gi|315063501|gb|ADT77828.1| isovaleryl CoA dehydrogenase [Escherichia coli W] gi|323380420|gb|ADX52688.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli KO11] Length = 541 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|293417690|ref|ZP_06660312.1| acyl-CoA dehydrogenase [Escherichia coli B185] gi|291430408|gb|EFF03406.1| acyl-CoA dehydrogenase [Escherichia coli B185] Length = 546 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ + + DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAEHLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|218561346|ref|YP_002394259.1| isovaleryl CoA dehydrogenase [Escherichia coli S88] gi|218368115|emb|CAR05922.1| isovaleryl CoA dehydrogenase [Escherichia coli S88] gi|294490556|gb|ADE89312.1| acyl-CoA dehydrogenase family protein [Escherichia coli IHE3034] gi|307629259|gb|ADN73563.1| isovaleryl CoA dehydrogenase [Escherichia coli UM146] gi|323950744|gb|EGB46622.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli H252] gi|323955474|gb|EGB51238.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli H263] Length = 541 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/517 (36%), Positives = 280/517 (54%), Gaps = 9/517 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + L R +T ++ L A + + +A + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYAFPPMAQAW 510 >gi|323171625|gb|EFZ57271.1| protein aidB [Escherichia coli LT-68] Length = 541 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSARYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|41410231|ref|NP_963067.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399065|gb|AAS06683.1| FadE8 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 532 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/510 (37%), Positives = 276/510 (54%), Gaps = 10/510 (1%) Query: 28 PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 PPL N S L+ ALI E+ +G S AQ +A+ N P LH + Sbjct: 2 PPLD-NYNPAGSPVLVEALIREGGQWGLDEVNEVGALSASRQAQRWGELADRNRPILHTH 60 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G R D+VE+ PA+H L+R +I GLH + W R AH +RAA+ + +E Sbjct: 61 DRNGYRVDEVEYDPAYHELMRTAIAHGLHAAPWADD-----RPGAHVVRAAKTSVWT-VE 114 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 GH+ S+T A + AL P + K + P + SREYDP + K + G+ +TEK+G Sbjct: 115 PGHVCPISMTYAVVPALRFNPELAKVYEPLLTSREYDPELRVATTKPGITAGMSMTEKQG 174 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 G+D+ A T+Q DG Y L+GHKWF S+PM D F++LAQ G + CFL+PR+L DG+ Sbjct: 175 GSDVRAGTTQAVPNGDGSYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFLLPRVLPDGTR 234 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD + S + Sbjct: 235 NRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATS 294 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSR 386 MR L AI++A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A + D+A + Sbjct: 295 MRTGLTRAIYHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDKAVRGD 354 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA RI +KYW CK + AEA+EC+GG+GY+E+ + R YRE+P I GS Sbjct: 355 QREALLRRIGLAASKYWVCKRSTPHAAEALECLGGNGYVEDSGMPRLYREAPLMGIWEGS 414 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFL 504 GN LD L + E LF L + G + + LR ++ + AR + Sbjct: 415 GNVSALDTLRAMATRPECVEVLFDELAEAAGQDPRLGGHVDRLRADLAELDTIQYRARKV 474 Query: 505 TEKIALASSAAALYRAGMNDIADVFLENRF 534 E I LA + L R G +A+ FL R Sbjct: 475 AEDICLALQGSLLVRHGHPAVAEAFLTTRL 504 >gi|170021803|ref|YP_001726757.1| isovaleryl CoA dehydrogenase [Escherichia coli ATCC 8739] gi|194439544|ref|ZP_03071618.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1] gi|253775188|ref|YP_003038019.1| isovaleryl CoA dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164116|ref|YP_003047224.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606] gi|256025122|ref|ZP_05438987.1| isovaleryl CoA dehydrogenase [Escherichia sp. 4_1_40B] gi|297520036|ref|ZP_06938422.1| isovaleryl CoA dehydrogenase [Escherichia coli OP50] gi|301028009|ref|ZP_07191293.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1] gi|312974004|ref|ZP_07788175.1| protein aidB [Escherichia coli 1827-70] gi|169756731|gb|ACA79430.1| acyl-CoA dehydrogenase domain protein [Escherichia coli ATCC 8739] gi|194421543|gb|EDX37556.1| acyl-CoA dehydrogenase family protein [Escherichia coli 101-1] gi|242379708|emb|CAQ34533.1| isovaleryl-CoA dehydrogenase / predicted acyl-CoA dehydrogenase [Escherichia coli BL21(DE3)] gi|253326232|gb|ACT30834.1| acyl-CoA dehydrogenase domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976017|gb|ACT41688.1| isovaleryl CoA dehydrogenase [Escherichia coli B str. REL606] gi|253980173|gb|ACT45843.1| isovaleryl CoA dehydrogenase [Escherichia coli BL21(DE3)] gi|299878919|gb|EFI87130.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 196-1] gi|309704692|emb|CBJ04042.1| probable acyl CoA dehydrogenase [Escherichia coli ETEC H10407] gi|310331538|gb|EFP98794.1| protein aidB [Escherichia coli 1827-70] gi|323940106|gb|EGB36300.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli E482] gi|323960231|gb|EGB55872.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli H489] gi|323970558|gb|EGB65817.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli TA007] Length = 541 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|312948836|gb|ADR29663.1| isovaleryl CoA dehydrogenase [Escherichia coli O83:H1 str. NRG 857C] Length = 541 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 190/507 (37%), Positives = 277/507 (54%), Gaps = 9/507 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ S L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500 >gi|170680540|ref|YP_001746582.1| isovaleryl CoA dehydrogenase [Escherichia coli SMS-3-5] gi|170518258|gb|ACB16436.1| acyl-CoA dehydrogenase family protein [Escherichia coli SMS-3-5] Length = 541 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKHGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|191170861|ref|ZP_03032413.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11] gi|190909085|gb|EDV68672.1| acyl-CoA dehydrogenase family protein [Escherichia coli F11] Length = 541 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 188/507 (37%), Positives = 278/507 (54%), Gaps = 9/507 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTHEGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWITPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGVRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500 >gi|218697937|ref|YP_002405604.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989] gi|312965861|ref|ZP_07780087.1| protein aidB [Escherichia coli 2362-75] gi|218354669|emb|CAV01673.1| isovaleryl CoA dehydrogenase [Escherichia coli 55989] gi|312289104|gb|EFR16998.1| protein aidB [Escherichia coli 2362-75] gi|320200683|gb|EFW75269.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli EC4100B] gi|323182293|gb|EFZ67703.1| protein aidB [Escherichia coli 1357] gi|324118752|gb|EGC12644.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli E1167] Length = 541 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|281181283|dbj|BAI57613.1| putative acyl-CoA dehydrogenase [Escherichia coli SE15] Length = 541 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 189/517 (36%), Positives = 280/517 (54%), Gaps = 9/517 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 L K + L R +T ++ L A + + +A + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQTW 510 >gi|82546571|ref|YP_410518.1| isovaleryl CoA dehydrogenase [Shigella boydii Sb227] gi|81247982|gb|ABB68690.1| putative acyl coenzyme A dehydrogenase [Shigella boydii Sb227] Length = 546 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|323161979|gb|EFZ47851.1| protein aidB [Escherichia coli E128010] Length = 541 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNTIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|307140881|ref|ZP_07500237.1| isovaleryl CoA dehydrogenase [Escherichia coli H736] gi|284924370|emb|CBG37489.1| probable acyl CoA dehydrogenase [Escherichia coli 042] gi|332346267|gb|AEE59601.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 541 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGWRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|323935312|gb|EGB31660.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli E1520] Length = 541 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSGRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|301045980|ref|ZP_07193163.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1] gi|300302023|gb|EFJ58408.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 185-1] Length = 546 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 190/509 (37%), Positives = 277/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L A+ S L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQM 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLK 505 >gi|457172|gb|AAC18889.1| putative; homology to acyl CoA dehydrogenases and isovaleryl CoA dehydrogenases [Escherichia coli] gi|537028|gb|AAA97083.1| CG Site No. 18553; induced by alkylating agents; an apparent frameshift in GenBank Accession Number L20915 results in two overlapping orfs in that sequence [Escherichia coli str. K-12 substr. MG1655] Length = 546 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|84496268|ref|ZP_00995122.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84383036|gb|EAP98917.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 547 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 193/524 (36%), Positives = 283/524 (54%), Gaps = 20/524 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVH-KELELLGEYVLSCTAQELARMANYNTPQ 83 +NQ P F+G N +SSD + V + + EL LG + Q A A+ NTP+ Sbjct: 7 VNQVPAFVGHNLFSSDEVAVEAMHRWGRAEDVAELTALGSLAGAAQTQAWADDAHRNTPR 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+V + ++H L+R ++ GL W R + AH RAA Sbjct: 67 LVTHDRVGHRIDEVAYDRSYHDLMRTAVGHGLTAEAWTRPAD----TGAHLRRAAGFVTW 122 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 ++ EAGHL S+T A+ AL +P + W P + SR+YDP K + S G+G+T Sbjct: 123 SRAEAGHLCPISMTYAAAPALRVSPALADRWLPLLASRDYDPELKPFSDRRSAIAGMGMT 182 Query: 204 EKRGGTDIAAITSQ-----GQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 EK+GG+D+ A +Q G I G Y L+GHKWF S+PMSD F++LA E V CFL Sbjct: 183 EKQGGSDVRANVTQAVATPGGPIDGGDTYRLTGHKWFFSAPMSDVFLVLATTESGVTCFL 242 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR+L+DG+ N L QRLK+K+GNRSNA+ E+EF + +G + +M Sbjct: 243 VPRVLDDGTRNALRLQRLKDKLGNRSNASSEVEFEGAWAVRVGGDGRGIRTIIEMVSSTR 302 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD + S + MR + A+H+AR R G LI+QP+M+ +AD+A++ AA L FRLA Sbjct: 303 LDCILGSSATMRQATVRAVHHARHRSAFGARLIEQPLMRNVLADLAIEAEAAELLGFRLA 362 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++ D +S AR+ + K+W CK P ++ EA+EC+GG+GY+EE +AR YRE+ Sbjct: 363 HAVDAGESE-----LARLGVALGKFWVCKRTPHLVGEALECLGGAGYVEENGLARLYREA 417 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI--LRDSISLCK 495 P NSI GSGN LDVL + + L L G + + I + ++ Sbjct: 418 PLNSIWEGSGNVGALDVLRAMTREPASVAALDKELSLARGHDRRLDLAIDAVPALVAAAG 477 Query: 496 EDKGL--ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 D G AR + E +A+ AA L + + +AD F+ +R + Sbjct: 478 SDSGAWQARGIVEHLAVTFQAALLVQHSPHAVADTFIASRLAEG 521 >gi|161505123|ref|YP_001572235.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866470|gb|ABX23093.1| hypothetical protein SARI_03257 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 540 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 187/516 (36%), Positives = 281/516 (54%), Gaps = 7/516 (1%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARM 76 P + NQP N + SD L ++ + +L +G+ + + + EL R+ Sbjct: 2 PWQTHTVFNQPTPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRL 61 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L Y P G+R D V FHPAWH L++ + +H W R + R Sbjct: 62 ANAYPPELQRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLSWAED----ARAGSFVAR 117 Query: 137 AARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 AAR L AQ+EAG L ++T +A+ + L P DW + S YD QK Sbjct: 118 AARFVLHAQVEAGALCPVTMTFAATPLLLRMLPATFHDWLAPLRSDRYDSHLLPGGQKRG 177 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 + IG+G+TEK+GG+D+ + T++ +++DG Y L GHKWF S P SDA ++LAQ +G V C Sbjct: 178 LLIGMGMTEKQGGSDVLSNTTRADRLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGGVSC 237 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + M + Sbjct: 238 FFVPRFLPDGQRNAVRLERLKDKLGNRSNASAEVEFQDAVGWLLGEEGEGIRHILKMGGM 297 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 D A+ S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FR Sbjct: 298 TRFDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFR 357 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA ++ E +S ++EA +AR++ P K+ CK +AEAME +GG GY EE + R YR Sbjct: 358 LARAW-EQRSEAKEALWARLLTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYR 416 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495 E P NSI GSGN M LDVL +L K +++ L + G + + L K Sbjct: 417 EMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLGEVFAEVKGQDRHYDRAVRQLQQRLRK 476 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 D+ + R +T+++ L A + R +A + + Sbjct: 477 PDEVMGREITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|306815598|ref|ZP_07449747.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101] gi|305851260|gb|EFM51715.1| isovaleryl CoA dehydrogenase [Escherichia coli NC101] Length = 541 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 190/507 (37%), Positives = 277/507 (54%), Gaps = 9/507 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ S L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHILSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQVLK 500 >gi|315617595|gb|EFU98201.1| protein aidB [Escherichia coli 3431] Length = 541 Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 190/522 (36%), Positives = 282/522 (54%), Gaps = 9/522 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ S L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ VR A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----VRSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + A+++ +RHV G LI+QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAVYHTHQRHVFGKSLIEQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKSGIPFVAEAMEALGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI SGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEDSGNIMCLDVLRVLNKQAGVYDLLTEAFMEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L K + L R +T ++ L A + + +A + + F Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQMMF 515 >gi|218692520|ref|YP_002400732.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a] gi|218430084|emb|CAR10931.1| isovaleryl CoA dehydrogenase [Escherichia coli ED1a] Length = 541 Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 188/507 (37%), Positives = 275/507 (54%), Gaps = 11/507 (2%) Query: 14 QVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73 Q H + L LN L++ S +L A+ S L +G+ + + + EL Sbjct: 4 QTHTVFNQLIPLNNSNLYL-----SDGALCEAVTREGASWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R +T ++ L A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLK 500 >gi|188492162|ref|ZP_02999432.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638] gi|188487361|gb|EDU62464.1| acyl-CoA dehydrogenase family protein AidB [Escherichia coli 53638] Length = 541 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 187/509 (36%), Positives = 275/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N Y SD L + + + L +G+ + + + EL R+AN N P+ Sbjct: 9 FNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGRLANVNPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G R D V FHPAWH L++ + +H W+ R A RAAR L Sbjct: 69 LLRYDAQGRRLDYVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAFVARAARFMLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P +DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G + CF VPR L Sbjct: 185 TEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M + D A+ Sbjct: 245 PDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL FRLA ++D Sbjct: 305 GSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDR 364 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 365 -RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + R L K + L R Sbjct: 424 WEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T ++ L A + + +A + + Sbjct: 484 EITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|89110907|ref|AP_004687.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr. W3110] gi|162135915|ref|NP_418608.6| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr. MG1655] gi|170083633|ref|YP_001732953.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr. DH10B] gi|238903294|ref|YP_002929090.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952] gi|12644215|sp|P33224|AIDB_ECOLI RecName: Full=Putative acyl-CoA dehydrogenase AidB gi|206582016|pdb|3DJL|A Chain A, Crystal Structure Of Alkylation Response Protein E. Coli Aidb gi|457174|gb|AAC18890.1| alternative putative coding sequence; GTG start codon; homology to acyl CoA dehydrogenases and isovaleryl CoA dehydrogenases [Escherichia coli] gi|85676938|dbj|BAE78188.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K12 substr. W3110] gi|87082384|gb|AAC77144.2| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr. MG1655] gi|169891468|gb|ACB05175.1| isovaleryl CoA dehydrogenase [Escherichia coli str. K-12 substr. DH10B] gi|238861568|gb|ACR63566.1| isovaleryl CoA dehydrogenase [Escherichia coli BW2952] gi|260450986|gb|ACX41408.1| acyl-CoA dehydrogenase domain protein [Escherichia coli DH1] gi|315138741|dbj|BAJ45900.1| isovaleryl CoA dehydrogenase [Escherichia coli DH1] Length = 541 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|320187361|gb|EFW62055.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Shigella flexneri CDC 796-83] gi|332087102|gb|EGI92236.1| protein aidB [Shigella boydii 3594-74] Length = 541 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSLLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|226362674|ref|YP_002780452.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226241159|dbj|BAH51507.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 563 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 197/533 (36%), Positives = 288/533 (54%), Gaps = 23/533 (4%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARM 76 P + LNQ +N ++ D++L + + +EL +G V S Q A + Sbjct: 14 PHRTHTVLNQSVPRTDVNEFTLDTVLSDAVRRHDAAWATQELTDVGALVGSAQFQHDAEL 73 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L + G R D+VE+HP++H ++ ++ G H S W +P + A+ R Sbjct: 74 ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA L AQ+E GH S+T+A + +L P V W P+ SR Y P AP K S Sbjct: 129 AAAFMLFAQIEPGHSCPISMTNAVIPSLDLQPDVAAIWKPRALSRSYIPELDAP-GKASA 187 Query: 197 AIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 G+ +TEK+GG+D+ A T+ G+ G Y L+GHKWF S+PMSDAF++LAQ EG Sbjct: 188 IFGMSMTEKQGGSDVRANTTVAKPAGRGGPGGDYLLTGHKWFCSAPMSDAFLVLAQAEGA 247 Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G CFL+PR+L DG+ N QRLKNK+GN+SNA+ E+E T G ++G+ Sbjct: 248 GGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEPGRGVRT 307 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M LD + S +GMR S+AEA+ +AR R G +L DQP M +AD+AL+ A Sbjct: 308 IIEMVARTRLDCVLGSAAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AT + RLA + DE S +E ++ R+ + KYW CK P EA+EC+GG+GY E+ Sbjct: 368 ATVTALRLARAHDEDAS-EQERSFRRLATAVAKYWICKRGPHHAYEALECLGGNGYTEDF 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KK 482 +AR YRE P ++ GSGN + LDVL + + + + + GS+ + Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNTVLDAHLDR 486 Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 V L D +L L AR + E +ALA A+ L R +AD F++ R Sbjct: 487 VRRQLGDLATLDPASAQLRARTVVESMALALQASLLIRFSPAAVADTFVDARL 539 >gi|313500760|gb|ADR62126.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 550 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 198/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G Q Sbjct: 3 LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R AH Sbjct: 62 GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RAA YL +Q EAG ++T A++ AL P + + W PKI + EYDP N K Sbjct: 117 VARAAMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + ++ ++A +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NS GSGN LDVL L K + + LF L G I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGYGDPRLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + AR LTE IALA A L AG D++D F+ +R Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRL 521 >gi|315446015|ref|YP_004078894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315264318|gb|ADU01060.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 544 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 191/518 (36%), Positives = 276/518 (53%), Gaps = 9/518 (1%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 D+ +NQ P N SS L ALI ++ LG S TA +A+ Sbjct: 5 DTHAVINQVPPLENFNPASSPVLAEALIREGGGWGADDVADLGALAGSVTAVRWGELADR 64 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P L + G R D+VEF P++H L+ ++ GLH + W R AH +RAA+ Sbjct: 65 NRPMLRTHDRYGHRVDEVEFDPSYHELMNVAVTHGLHAAPWADD-----RVGAHVVRAAK 119 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + EAGHL S+T A + AL P + + P + SR YD + P K + G Sbjct: 120 TSVWTP-EAGHLCPISMTYAVVPALRHNPDLAAVYEPLLTSRVYDAELRVPTTKPGITAG 178 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 + +TEK+GG+D+ A T++ + DG Y L+GHKWF S+PM D F++LAQ G + CF +P Sbjct: 179 MSMTEKQGGSDVRAGTTEARANGDGTYRLTGHKWFTSAPMCDIFLVLAQAPGGLSCFFLP 238 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD Sbjct: 239 RILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLD 298 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ AAT L+ R+A + Sbjct: 299 CTLGSATSMRNGLMRAVHHAQHRKAFGRYLIDQPLMRNVLADLAVEAEAATMLAMRMAGA 358 Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D A + E RI KYW CK A AEAMEC+GG+GY+E+ +AR YRE+P Sbjct: 359 TDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDFGMARLYREAP 418 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED- 497 I GSGN LD L + E LF L + G + + R + L D Sbjct: 419 LMGIWEGSGNVSALDALRAMATRPECIEVLFGELAETDGQDPRLDAHVHRLRLELSDIDA 478 Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I+LA + L R G +A+VFL +R Sbjct: 479 IEYRARRVAEDISLALQGSLLVRHGHPAVAEVFLASRL 516 >gi|209517312|ref|ZP_03266155.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209502195|gb|EEA02208.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 562 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 200/553 (36%), Positives = 295/553 (53%), Gaps = 25/553 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ-ELARMANYNTPQL 84 NQ P N ++SD+ L + + H+E L L+ A LA +AN +TP+L Sbjct: 14 NQAPPLADYNLFASDTALSEAVDRDGAQWHREALLRHGAALTTPATLALAELANRHTPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHPAWH LL +GLH + EP + A R A +L A Sbjct: 74 ITHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---EP--QNGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E+G L ++T AS+ L + P + +++RE+DP + QK S IG+G+TE Sbjct: 129 QIESGSLCPLTMTFASIPVLQSEPALFATLREALYTREHDPRDLPLTQKRSAMIGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257 K+GG+D+ + ++ + L GHKWF S+P DA ++LA+ G CF Sbjct: 189 KQGGSDVRSNQTRAHALDGAGGRGGAYRLIGHKWFFSAPQCDAHLVLARTGTHEGLSCFF 248 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G ++GD + +M Sbjct: 249 VPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVPTIIEMANYTR 308 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I S + MR SL +AIH+AR R G L +QP+M+ +AD+AL+ AAT L RLA Sbjct: 309 LDCVIGSAALMRASLVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESEAATVLFMRLA 368 Query: 378 NSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +F+ + + S E A+ RI+ P KYW CK A EAME GG+GY+E +AR Sbjct: 369 RAFEGSDDASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMARF 428 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493 YRE+P NSI GSGN M LDVL +E+ + LF+ QD+ + + L + Sbjct: 429 YREAPVNSIWEGSGNVMCLDVLRAMEREPQAAQALFAAW-QDVARAHPALGAALARLAAT 487 Query: 494 ----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHST---HCMLH 546 ++ + AR + ++I L + A L + +AD F+ R D C + + L Sbjct: 488 LNGPAEQREASARRIAQQIVLIAQATLLAQHAPATVADAFIATRLADGCGESGRVYGTLP 547 Query: 547 GRFNAAHIIDSLY 559 F+ A I++ + Sbjct: 548 ATFDHAAIVERAF 560 >gi|331650312|ref|ZP_08351384.1| putative acyl-CoA dehydrogenase [Escherichia coli M605] gi|331040706|gb|EGI12864.1| putative acyl-CoA dehydrogenase [Escherichia coli M605] Length = 546 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 187/509 (36%), Positives = 277/509 (54%), Gaps = 9/509 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 TFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R ++ ++ L A + + Sbjct: 477 QQLRKPAEELGREISHQLFLLGCGAQMLK 505 >gi|187733139|ref|YP_001882876.1| isovaleryl CoA dehydrogenase [Shigella boydii CDC 3083-94] gi|187430131|gb|ACD09405.1| acyl-CoA dehydrogenase family protein [Shigella boydii CDC 3083-94] Length = 541 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|302522630|ref|ZP_07274972.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|302431525|gb|EFL03341.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78] Length = 450 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 181/436 (41%), Positives = 251/436 (57%), Gaps = 15/436 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYN 80 NQPP +G + + +D L + P+++ EL LG S AQE AN N Sbjct: 23 NQPPPLVGYDVFGADRALSEAVERHLDPALLPGARTELSELGRAAGSAQAQEWGAQANEN 82 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L + G R D+VEFHPAWH LL ++ GL S W R H RAA Sbjct: 83 PPKLRTHDRFGHRIDEVEFHPAWHRLLGHAVSAGL-TSAW-------ARPGGHVRRAAGF 134 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 Q EAGH S+T A++ AL P + +W P + SR YD + K G+ Sbjct: 135 LTWTQAEAGHGCPLSMTHAAVPALRAQPDLAAEWEPLLTSRVYDEGLRPASAKAGALFGM 194 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TEK+GG+D+ A T++ ++ DG + L+GHKWF S+PMSD F++L Q G + CFLVP Sbjct: 195 GMTEKQGGSDVRANTTRAVPLAEDGAFALTGHKWFCSAPMSDGFLVLGQAPGGLSCFLVP 254 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DG N QRLK+K+GNRSNA+ E+EF T+ L+G+ + +M LD Sbjct: 255 RVLADGERNVFAIQRLKDKLGNRSNASSEVEFDGTWARLVGEEGRGVRTIIEMVSATRLD 314 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ S + MR ++A+AIH+A R GG L+ +P+M +AD+AL+ AAT L+ RLA + Sbjct: 315 CALGSAALMRQAVAQAIHHATYREAFGGPLVGKPLMSNVLADLALESEAATTLALRLAAA 374 Query: 380 FDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 +D A + E E A R+ P+ KYW K V+AEA+EC+GG+GY+EE + R RESP Sbjct: 375 YDAAGAGDERERALLRLAVPVAKYWVTKRCTPVVAEALECLGGNGYVEESGLPRLLRESP 434 Query: 439 ANSILLGSGNAMVLDV 454 NS+ GSGN LDV Sbjct: 435 LNSLWEGSGNVQALDV 450 >gi|169630939|ref|YP_001704588.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169242906|emb|CAM63934.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length = 544 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 272/519 (52%), Gaps = 9/519 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 +D+ NQ P NA +S L+ ALI E+ +G + Q +AN Sbjct: 2 ADTHVVTNQVPALRDYNAATSPVLMEALIREGGQWGVDEVLEVGALNGTDRMQRAGELAN 61 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 N P LH + G R D++EF PA+H L+R ++ GLH + W R AH +RAA Sbjct: 62 RNRPVLHTHDRWGHRVDEIEFDPAYHELMREAVAHGLHGAPWADE-----RPGAHVVRAA 116 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 + + + GH+ S+T A + AL P + + P + SR YDP P K + Sbjct: 117 KTGVWTA-DPGHMCPISMTYAVVPALRANPELAAVYEPLLSSRVYDPVLAVPTAKAGLTA 175 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G+ +TEK+GG+D+ A T+ +DG Y L GHKWF S+PM D F++LAQ G + CF + Sbjct: 176 GMSMTEKQGGSDVRAGTTTATPSADGSYTLVGHKWFTSAPMCDVFLVLAQAPGGLSCFFL 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DGS N + QRLK+K+GN SNA+ E+E+ +L+G+ + +M + L Sbjct: 236 PRVLPDGSRNRMRLQRLKDKLGNHSNASSEVEYDEATAWLVGEEGKGVKTIIEMVNMTRL 295 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D + S + MR +A A+H+A+ R G LIDQP+M+ +AD+A++ AAT ++ R+A Sbjct: 296 DCTLGSATSMRTGVALAMHHAQHRKAFGEYLIDQPLMRNVLADLAIEAEAATMVAMRMAG 355 Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D A E E+ RI +KYW CK A EAMEC+GG+GY+E+ + R YRE+ Sbjct: 356 ATDRATRGDETESLLRRIGLAASKYWVCKRATPHAGEAMECLGGNGYVEDSGLPRLYREA 415 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P I GSGN LD L + E LF L G + + I L +S + Sbjct: 416 PLMGIWEGSGNVSALDTLRAMATKPECVEVLFKELALAQGQDERLDRHINGLHSQLSDLE 475 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E I LA A L R G +A FL R Sbjct: 476 SVTYRARKVAEDICLALQGALLVRHGHPAVAQAFLATRL 514 >gi|323975471|gb|EGB70572.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia coli TW10509] Length = 541 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 189/522 (36%), Positives = 281/522 (53%), Gaps = 9/522 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASGEVEFQDAIGWLLGQEGEGVRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKLVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFMEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L K + + R +T ++ L A + + +A + + F Sbjct: 474 LRKPAEEMGREITRQLFLLGCGAQMLKYASPPMAQAWCQMMF 515 >gi|333011169|gb|EGK30583.1| protein aidB [Shigella flexneri K-272] gi|333012637|gb|EGK32017.1| protein aidB [Shigella flexneri K-227] Length = 541 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 188/519 (36%), Positives = 280/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P + W + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQGWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|300955250|ref|ZP_07167643.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1] gi|300317827|gb|EFJ67611.1| acyl-CoA dehydrogenase protein [Escherichia coli MS 175-1] Length = 546 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 189/521 (36%), Positives = 281/521 (53%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DSVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALYTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L G KWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGDKWFFSVPQSDAHLVLAQTA 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|213859959|ref|ZP_03385663.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 540 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 185/509 (36%), Positives = 280/509 (55%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++AR+R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHARQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|209921676|ref|YP_002295760.1| isovaleryl CoA dehydrogenase [Escherichia coli SE11] gi|209914935|dbj|BAG80009.1| putative acyl-CoA dehydrogenase [Escherichia coli SE11] Length = 546 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 189/523 (36%), Positives = 283/523 (54%), Gaps = 13/523 (2%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSAS---MVALMTTPRVHKDWAPKIFSREYDPTNK 188 A RAAR L AQ+EAG L ++T A+ ++ ++ P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLLAP--FQDWTTPLLSDRYDSHLL 175 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 176 PGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQ 235 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG Sbjct: 236 TTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRL 295 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + Sbjct: 296 ILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEG 355 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 TAL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE Sbjct: 356 QTALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEES 414 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488 + R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 415 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRR 474 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 475 LQQQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|161486769|ref|NP_808015.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 546 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 185/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 15 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 75 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 130 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI+YA +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 311 GSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518 >gi|295678013|ref|YP_003606537.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295437856|gb|ADG17026.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 562 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 200/553 (36%), Positives = 298/553 (53%), Gaps = 25/553 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL-GEYVLSCTAQELARMANYNTPQL 84 NQ P N ++SD+ L A + + H+E L G + + LA +AN +TP+L Sbjct: 14 NQAPALADYNLFASDAALSAAVDRDGASWHREALLRHGATLTTPDTLALAELANRHTPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHPAWH LL +GLH + +P R A R A ++ A Sbjct: 74 VTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP--RSGAMAARCAGYFMHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E+G L ++T AS+ L P + ++++RE+DP + QK S+ IG+G+TE Sbjct: 129 QIESGSLCPLTMTFASIPVLQREPVLFDTLRVQLYTREHDPRDVPLTQKRSMMIGMGMTE 188 Query: 205 KRGGTDIAAITSQGQKISDGIYC-----LSGHKWFLSSPMSDAFIMLAQVEGRVG--CFL 257 K+GG+D+ + ++ + L GHKWF S+P DA ++LA+ + G CF Sbjct: 189 KQGGSDVRSNRTRAHALDGAGGRGGAYGLIGHKWFFSAPQCDAHLVLARTDTHEGLSCFF 248 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G ++GD + +M Sbjct: 249 VPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAYGVMIGDEGRGVPTIIEMANYTR 308 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD I S + MR +L +AIH+AR R G L +QP+M+ +AD+AL+ AAT L RLA Sbjct: 309 LDCVIGSAALMRAALVQAIHHARHRSAFGRHLAEQPLMRNVLADLALESEAATVLFMRLA 368 Query: 378 NSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +F D + + S E A+ RI+ P KYW CK A EAME GG+GY+E +AR Sbjct: 369 RAFEESADASSASSAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMARF 428 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS----GKKVITILRD 489 YRE+P NSI GSGN M LDVL +E+ + LF+ QD+ + G ++ + Sbjct: 429 YREAPVNSIWEGSGNVMCLDVLRAIEREPQAAQALFAAW-QDVARAHPALGAALVRLATT 487 Query: 490 SISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS---THCMLH 546 ++ + AR + ++I L + A L + +AD F+ R D C + L Sbjct: 488 LNGPAEQREASARRIAQQIVLIAQATLLAQHAPAAVADAFIATRVADGCGENGRVYGTLP 547 Query: 547 GRFNAAHIIDSLY 559 F+ A II+ + Sbjct: 548 ATFDHAAIIERAF 560 >gi|29140312|gb|AAO71875.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 540 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 185/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI+YA +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYYAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|56130425|gb|AAV79931.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 540 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + +RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVVRAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|320177552|gb|EFW52542.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Shigella boydii ATCC 9905] Length = 541 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 188/519 (36%), Positives = 278/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSKLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDRCAD-AKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|238028894|ref|YP_002913125.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia glumae BGR1] gi|237878088|gb|ACR30421.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1] Length = 558 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 199/535 (37%), Positives = 293/535 (54%), Gaps = 19/535 (3%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTA 70 M+Q P+ + NQ P NA+ +D L + + + H+ L G + + Sbjct: 1 MDQ-QAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADT 59 Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 LA +AN + P+L + P GER D +EFHP+WH LL +GLH + EP R Sbjct: 60 LALAELANRHPPELATHSPRGERLDALEFHPSWHQLLALLRGEGLHALPFS---EP--RA 114 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A R A +L AQLE+G L ++T AS+ L P + ++++RE+DP + Sbjct: 115 GAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRERLYTREHDPRDVPL 174 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIML 246 K S+ +G+G+TEK+GG+D+ + ++ G Y L GHKWF S+P DA ++L Sbjct: 175 AAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVL 234 Query: 247 AQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 A+ G CF VPR DG+ N + QRLK+K+GNRSNA+ E+EF + +G ++G+ Sbjct: 235 ARSAEHAGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGR 294 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M L LD I S + MR +L +AIH+AR RH G L DQP+M+ +AD+AL Sbjct: 295 GVPTIIEMANLTRLDCVIGSAALMRAALVQAIHHARHRHAFGRRLADQPLMRNVLADLAL 354 Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AAT L RLA++ + R EA + RI+ P K+W CK A EAME GG+G Sbjct: 355 ESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRALEFTGEAMEVWGGNG 414 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 Y+E +AR YRE+P NSI GSGN M LDVL +E+ + L + DLG ++V Sbjct: 415 YVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGER-REV 473 Query: 484 ITILRDSISL----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L D ++ + + AR + ++IAL + AA L R ++AD F+ RF Sbjct: 474 RRALDDLLATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRF 528 >gi|161936197|ref|YP_153243.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 546 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 15 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + +RAAR L Sbjct: 75 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVVRAARFVLH 130 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 251 PDGRRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEVFTEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518 >gi|312138716|ref|YP_004006052.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311888055|emb|CBH47367.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length = 545 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 191/534 (35%), Positives = 293/534 (54%), Gaps = 8/534 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P I +A +L AL E+ +G AQ L +A + P L Sbjct: 9 NQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAHPPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+ PA+H L+ ++ GLH + W +P R QAH IRAA+ + Q Sbjct: 69 THDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPW---ADP--RPQAHLIRAAKNAVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 ++AGH S+T A + AL P + + + P + ++ YDP +AP+ K + G+ +TEK Sbjct: 124 VDAGHGCPISMTYAVVPALRHDPELARQYEPLLTAKVYDPELRAPLTKPGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T++ DG Y ++GHKWF S+PMSD F++LAQ G + CFL+PR+L DG Sbjct: 184 QGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPRILPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N + QRLK+K+GN SNA+ E+E+ + + +GD + +M + LD I + Sbjct: 244 SRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDCTIGTA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +GMR+ +A+A H+A R G LIDQP+M+ +AD+A++ A+T ++ LA D A + Sbjct: 304 TGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHADN 363 Query: 386 RSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +A+ R +A ++KY+ CK PA AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 364 GDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LDVL + + E F L+ G + + L+ + + + AR Sbjct: 424 GSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASLEHRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + ++ALA A L R G +AD F +R + L + A IID Sbjct: 484 SVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIID 537 >gi|108763195|ref|YP_635424.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108467075|gb|ABF92260.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 558 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 190/517 (36%), Positives = 281/517 (54%), Gaps = 14/517 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP + +A+++D++L ++A +L G V+ Q+LA +AN N P+ Sbjct: 18 NQPPP-LEYDAWTTDTVLREVVAREGGGWAEADLAKYGP-VVGGEMQQLAFLANENKPKF 75 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPA+H L+ + G+ W +P AH R A YL Sbjct: 76 RPFDRYGNRRDEVEFHPAYHRLMELGMAHGVSGFAWRNEDKP----GAHVARMALFYLHN 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q + G ++T AS+ AL P V +W P++ S YD QK+ IG+G+TE Sbjct: 132 QADNGTSCPLTMTYASVPALRHQPEVAMEWLPRVSSASYDSRFIPAAQKSGATIGMGMTE 191 Query: 205 KRGGTDIAAITSQGQKISDG-----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 K+GG+D+ T++ ++ +G Y L GHKWF S+PMSDAF++LA EG + CFL+P Sbjct: 192 KQGGSDVRTNTTKAHRLGEGRGPGQPYALVGHKWFFSAPMSDAFLVLAHAEGGLSCFLMP 251 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLK+K+G+ SNA+ E+E + ++G + +M L D Sbjct: 252 RFTPDGALNAIRVQRLKDKLGDWSNASSEVELHGAYAVMVGAEGRGVPTILEMVALTRQD 311 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S MR +L +AIH+ R R G LIDQP+M+ +AD+AL++ A AL+ R++ + Sbjct: 312 CMIGSSGQMRQALVQAIHHTRHRVAFGKRLIDQPLMRNVLADLALELEAHVALTGRVSRA 371 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D +EAA+ RI + KYW CK P+ + EA EC+GG+GY+EE ++ R YR++P Sbjct: 372 VDATPRDEKEAAFCRIATAVGKYWVCKRTPSFVNEAQECLGGAGYVEETNLPRLYRQAPL 431 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-- 497 NSI GSGN LDVL + E LF+ L G R L D Sbjct: 432 NSIWEGSGNIQCLDVLRAASREPASREALFAELLAAQGGHPAYDEATARLGKELANTDSL 491 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + +R + E +ALA A+ L RAG ++D F E+R Sbjct: 492 EVRSRTIVEGLALALQASLLIRAGNTAVSDAFCESRL 528 >gi|330908529|gb|EGH37048.1| alkylation response protein AidB, acyl-CoA dehydrogenase family [Escherichia coli AA86] Length = 541 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 186/507 (36%), Positives = 276/507 (54%), Gaps = 9/507 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGTF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYR 519 L K + L R ++ ++ L A + + Sbjct: 474 LRKPAEELGREISHQLFLLGCGAQMLK 500 >gi|283834806|ref|ZP_06354547.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC 29220] gi|291069052|gb|EFE07161.1| acyl-CoA dehydrogenase family protein [Citrobacter youngae ATCC 29220] Length = 540 Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 188/519 (36%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+I L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPVPLNNSNLYLSDGALCEAVIREGAGWDSDLLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN P+L Y G+R D FHPAWH L++ + +H W E R+ Sbjct: 59 GRLANAFPPELLRYDAQGQRLDDARFHPAWHLLMQGLCANRVHNLAW----EDDARQGTF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + P DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGTLCPVTMTFAATPLLFQMLPAPFHDWLTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T+Q ++++DG Y L GHKWF S P SDA ++LAQ +G Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLADGSYRLVGHKWFFSVPQSDAHLVLAQAKGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + M Sbjct: 235 LSCFFVPRFLPDGGRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGEEGEGIRHILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S MR + + AI++A +R V G LI+QP+M++ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHGMMRRAFSVAIYHAHQRQVFGKPLIEQPMMRQVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RENAKEALWARLFTPAAKFSICKSGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + + Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLTKQPGIYDMLSEAFAEVKGQDRHYDRLVRQLQQH 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T+++ L A + R +A + + Sbjct: 474 LRKPSEELGREITQQLFLLGCGAQMLRYASPPVAQAWCQ 512 >gi|26991460|ref|NP_746885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24986536|gb|AAN70349.1|AE016676_9 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440] Length = 550 Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 197/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G Q Sbjct: 3 LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R AH Sbjct: 62 GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPW---AEP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T A++ AL P + + W PKI + EYDP N K Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + ++ ++A +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NS GSGN LDVL L K + + LF L G I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + AR LTE IALA A L AG D++D F+ +R Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNADVSDAFIGSRL 521 >gi|149378325|ref|ZP_01896032.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149357383|gb|EDM45898.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 567 Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 190/538 (35%), Positives = 285/538 (52%), Gaps = 13/538 (2%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQPP N + D +L A+ + +L+ G + + L AN N P Sbjct: 28 FNQPPALEDYNLFEQDKALQEAVAREGAAAATSDLKQFGAFAGAADTIALGFHANENKPV 87 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + + G R D+V+FHPA+H L+ ++ +GLH S W AH R A+ Y+ Sbjct: 88 FNTHDRFGHRTDQVDFHPAYHQLMSAAMENGLHSSPWANP-----GAGAHVARTAKYYMH 142 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EA H ++T A++ ++ P + W KI + YDP N +K SV IG+ +T Sbjct: 143 SQIEAAHCCPITMTFAAVPSIRKQPELAAVWENKILANSYDPRNLPDSEKQSVTIGMAMT 202 Query: 204 EKRGGTDIAAITSQGQKI-SDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 EK+GG+D+ A T++ I ++G Y L GHKWF+S+PM DAF++LAQ + CFL+P Sbjct: 203 EKQGGSDVRANTTRAYAIGAEGPGQAYELIGHKWFVSAPMCDAFLVLAQTRSGLSCFLMP 262 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N QRLKNK+GN +NA+ E E +++G+ + +M + D Sbjct: 263 RWRPDGSKNPWQIQRLKNKMGNVANASSEAELRGAMAWMVGEEGRGVPTIIEMVAMTRFD 322 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S +GMR +LA+A H+ R R GG L +QP+M+ +AD+AL+ AA A + R+A S Sbjct: 323 CMIGSSAGMRQALAQASHHCRHRSAFGGRLSEQPLMQNVLADLALESEAALAYTMRVARS 382 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + E AR+ P+ KYW CK P EAMECIGGSG +E+ + R RESP Sbjct: 383 LDN-QHLEHERLLARLATPVGKYWICKRTPNHAYEAMECIGGSGVMEDCIMPRLLRESPV 441 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 N+I GSGN LD L L+K + + F+ + GS + + + L++ + + Sbjct: 442 NAIWEGSGNVQCLDTLRALQKEPDTLDAFFNEAAEARGSDARFDRFLAQLQNDFADISDF 501 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR L +++AL ++ L R +AD F +R N + L N A II Sbjct: 502 EYRARNLVDRLALLMQSSLLLRHSDPAVADAFCASRLEHNGGLNYGNLPSGTNPAAII 559 >gi|154245212|ref|YP_001416170.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154159297|gb|ABS66513.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 545 Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 179/402 (44%), Positives = 258/402 (64%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 L R+AN N P+LH++ P G R D VEFHPA+HAL+ +S+ GLHCS WD P ++ Sbjct: 57 LGRLANENPPELHSHDPQGRRCDVVEFHPAYHALMAQSMDAGLHCSSWDGPARPAEARRG 116 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 + RA RLY+++Q+EAGH+ ++T A+ +L P + +D+ P+I +R YD + Sbjct: 117 NAQRATRLYVVSQVEAGHVCPLTMTHAAPASLAAAPELLRDFLPRIRARNYDGRFVPFWE 176 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K SV IG+ +TE++GGTD+ + T+Q I Y ++G KWFLS+PMSDAF++LAQ G Sbjct: 177 KASVTIGMSMTERQGGTDVRSNTTQAVPIGGSEYEITGAKWFLSAPMSDAFLVLAQAPGG 236 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+PR DGS NG+ RLK K+GNRSNA+ E+EF F + +G+ + M Sbjct: 237 LTAFLMPRFRPDGSVNGVRLTRLKRKLGNRSNASCEVEFERAFAWRVGEEGRGIPTIIGM 296 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + LD A+ S MR +LA A+H+AR R L+DQP M +AD+ALD A AL Sbjct: 297 VQMTRLDCAVSSAGLMRAALARALHHARHRTAFQKKLVDQPAMAMVLADLALDQEAFAAL 356 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +FRLA SFDEA EAA+AR++ P+ K+ CK APA IAE ME +GG+GY+E+ ++ R Sbjct: 357 AFRLALSFDEANGSGTEAAHARVLTPVAKFAVCKAAPAFIAETMEVLGGNGYVEDCALPR 416 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 YRE+P N+I GSGN M LD+ + + +L + + + L++ Sbjct: 417 LYREAPVNAIWEGSGNVMALDLARVAFREPDLVQAILANLKE 458 >gi|167994994|ref|ZP_02576084.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16422938|gb|AAL23197.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327231|gb|EDZ13995.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249467|emb|CBG27332.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301160864|emb|CBW20396.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915475|dbj|BAJ39449.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|332991188|gb|AEF10171.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 540 Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK+ +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|320176387|gb|EFW51442.1| Alkylation response protein AidB, acyl-CoA dehydrogenase family [Shigella dysenteriae CDC 74-1112] Length = 541 Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 188/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+ EK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMAEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMCHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|161353573|ref|NP_463238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|267996709|gb|ACY91594.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323132714|gb|ADX20144.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 546 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 15 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 75 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 130 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK+ +AEAME +GG GY EE + R YRE P NSI Sbjct: 370 QRREAKEALWARLFTPAAKFAICKLGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518 >gi|158424026|ref|YP_001525318.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158330915|dbj|BAF88400.1| acyl CoA dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 574 Score = 315 bits (808), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 196/473 (41%), Positives = 276/473 (58%), Gaps = 17/473 (3%) Query: 24 ALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82 NQPP F ++ + D+ L AL A+ P H L G S L R AN N P Sbjct: 45 GFNQPPPFTDVDLLACDAALRDALGAHGPVPAH--LRSAGAEWGSRERMCLGRQANENPP 102 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +LH++ G+R D VEFHPA+HAL+ S GLHC+ W + + H RAARLYL Sbjct: 103 RLHSHDARGQRLDTVEFHPAYHALMAASSAGGLHCATW--------QGERHLHRAARLYL 154 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAGH+ ++T A+ AL P + +W ++ SR YD +KT+V +G+G+ Sbjct: 155 TAQVEAGHICPLTMTHAAPAALAAAPELQAEWLGRLTSRLYDGRFLPFWEKTAVTLGMGM 214 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GGTD+ A ++ + Y +SGHKWF S+PM DAF++LAQ + FL+PR Sbjct: 215 TEKQGGTDVRANVTRADRTGGSEYEISGHKWFFSAPMCDAFLVLAQAPEGLTTFLMPRFR 274 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DGS NGL QRLK+K+GNRSNA+ E+EF F + +G + +M L LD A+ Sbjct: 275 PDGSVNGLRLQRLKDKLGNRSNASSEVEFDRAFAWRVGAEGRGVATILEMVQLTRLDCAV 334 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR +L+EA+H AR R V G L+ QP M+ +AD+AL+ AATAL+ RLA SFD Sbjct: 335 SSAGLMRRALSEALHNARHRSVFGRRLVVQPAMRLVLADLALEAEAATALAMRLAASFDA 394 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A +EAA AR++ P K+ CK AP I EAME +GG+GY+E+ + R +RE+P N+I Sbjct: 395 AAGSPQEAARARLLTPAVKFAVCKAAPDFIYEAMEAVGGNGYVEDSPLPRLFREAPVNAI 454 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG------SSGKKVITILRD 489 G+G + LD+L + L L ++ G ++ ++V +LRD Sbjct: 455 WEGTGTVVALDLLRAAGRDPQAMALLLDDLGREAGGLPGVTATIRQVSGLLRD 507 >gi|311894642|dbj|BAJ27050.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054] Length = 548 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 203/526 (38%), Positives = 285/526 (54%), Gaps = 8/526 (1%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M H + + NQ P G + + LL L EL LG S AQ Sbjct: 1 MTASHPTATTHHVTNQAPPLTGHDVAADPVLLEGLDREGAGWHRAELHRLGRLAGSEQAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 + A AN + P+L + G R D+VEFHPA+H L+ S+ GL + +P R Sbjct: 61 QWADQANRHEPELRTHDRYGNRVDEVEFHPAYHHLMDLSVGAGLAGAA---WADP--RPG 115 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AH RAA + LE GHL S+T A + AL P + + P + SR YDP +AP Sbjct: 116 AHVARAAGFMVATTLEPGHLCPVSMTYAVVPALRHAPELAAAYEPLLTSRTYDPGLRAPA 175 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 K + G+G+TEK+GG+D+ A T+ + +DG + L GHKWF S+PM+D F++LAQ G Sbjct: 176 GKRGLLAGMGMTEKQGGSDVRANTTAAVRQADGSWRLRGHKWFTSAPMNDLFLVLAQAPG 235 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + CFLVPR+L DGS N QRLK+K+GNRSNA+ E EF +T +L+G + + Sbjct: 236 GLSCFLVPRVLPDGSRNTFRIQRLKDKLGNRSNASSEPEFDDTAAWLVGAEGKGVRTIIE 295 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M + LD + S +G R +LA+A H+AR R G +LIDQP+M+ +AD+AL+ AAT Sbjct: 296 MVTMTRLDCVLGSAAGTRAALAQAAHHARHRAAFGALLIDQPLMRNVLADLALESEAATT 355 Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ RLA + D A+ + E A RI + KYW CK PA +AEA+EC+GG+GY E + Sbjct: 356 LALRLAGAADRAQHGDTGEKALLRIATAVAKYWVCKRQPAAVAEALECLGGNGYDEASGL 415 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488 R YRE+P NSI GSGN LD+ L + + L + ++ G+ + LR Sbjct: 416 PRLYREAPLNSIWEGSGNVTALDLQRALVREPETLDALAAEIDLAAGADPRLDAAWHALR 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + AR + E+ AL AA L R +AD F +R Sbjct: 476 AELRPTPDAPLRARRVIERTALVLQAALLVRHAPAPVADAFCASRL 521 >gi|149917304|ref|ZP_01905803.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] gi|149821911|gb|EDM81305.1| putative acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] Length = 561 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 192/530 (36%), Positives = 282/530 (53%), Gaps = 18/530 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQPP F G+N ++SD L + +A H + L G V S AN P+L Sbjct: 17 NQPPAFEGVNLWASDRALRSAVAREGGAAHADALHGFGARVGSAEVTAWGFEANRARPEL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G+R D+V +HP++H L+ ++ G+ W + P H AA ++MA Sbjct: 77 LTFDRYGQRVDEVRYHPSYHRLMALAVEAGMPSVAWTEADTP----SGHVAHAAYEFMMA 132 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G S+T A + AL P + + PK+ +R YDP K +K + +G+ +TE Sbjct: 133 QAEPGVCCPLSMTYAVVPALRHEPALAEALVPKLSARVYDPEFKPMTEKAGLTMGMAMTE 192 Query: 205 KRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 K+GG+D+ A T+Q ++ SD Y L GHKWF S+PMSDAF+ LAQ G + C LVPR Sbjct: 193 KQGGSDVRANTTQAHRLGGSDTDYELVGHKWFCSAPMSDAFLTLAQAPGGLTCLLVPRWR 252 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG+ N QRLK+K+G+ +NA+ E+E++ T+ +G+ + +M LD + Sbjct: 253 PDGTRNPFFIQRLKDKLGDHANASSEIEYAGTYARRVGEEGRGVRTIIEMVHHTRLDCIV 312 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 M +R ++A A +A+ R G LIDQP+M+ +AD+ ++ AATAL+ R+A SFDE Sbjct: 313 MPAGMLRQAVANACWHAQHRAAFGAKLIDQPLMREVLADLIVESEAATALAMRVARSFDE 372 Query: 383 A---KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 A + E A AY+R+ P+ KYW K P + EAMEC GG+GYIEE + R +R+SP Sbjct: 373 AGHDGAVGERARAYSRLATPVAKYWLNKRLPEAVYEAMECHGGAGYIEESVMPRLFRQSP 432 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 NSI GSGN + LDVL + + + + L G + + L D + Sbjct: 433 LNSIWEGSGNVICLDVLRAMGREPSCVAAVLEELNASRGGDPRYDAFVAALEDRFARVGR 492 Query: 497 D---KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN--CHST 541 + AR L E++ LA AA L R G +AD F R C+ T Sbjct: 493 EPVHPREARQLCERLGLALQAAVLVRHGEPAVADAFCAGRLAGEGRCYGT 542 >gi|148549858|ref|YP_001269960.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148513916|gb|ABQ80776.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 550 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 196/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G Q Sbjct: 3 LHQYAETHEVTNQPPPLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R AH Sbjct: 62 GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T A++ AL P + + W PKI + EYDP N K Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNIGDRHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + ++ ++A +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NS GSGN LDVL L K + + LF L G I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFVELGDGHGDPRLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + AR LTE IALA A L AG +++D F+ +R Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNTEVSDAFIGSRL 521 >gi|325276233|ref|ZP_08142029.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324098633|gb|EGB96683.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 550 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 196/526 (37%), Positives = 285/526 (54%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G Q Sbjct: 3 LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R AH Sbjct: 62 GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--RPGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T A++ AL P + + W PKI + EYDP N K Sbjct: 117 VARASMTYLHSQAEAGSGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVILGMAMTEKQGGTDVRANTTRAYSVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E + CFL+PR D S N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 EKGLSCFLLPRHRPDDSRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQATHHCAYRKVGGRVLNEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + ++ + ++A +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGQALEQLED-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NS GSGN LDVL L K + + LF+ L G I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFAELGDGHGDPRLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + AR LTE IALA A L AG ++D F+ +R Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNALVSDAFIGSRL 521 >gi|82779433|ref|YP_405782.1| isovaleryl CoA dehydrogenase [Shigella dysenteriae Sd197] gi|81243581|gb|ABB64291.1| putative acyl coenzyme A dehydrogenase [Shigella dysenteriae Sd197] Length = 542 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 188/521 (36%), Positives = 280/521 (53%), Gaps = 9/521 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 4 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 62 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 118 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTT 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + +LL + Sbjct: 238 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 298 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQ 476 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 477 QQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 517 >gi|332283648|ref|YP_004415559.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB protein [Pusillimonas sp. T7-7] gi|330427601|gb|AEC18935.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB protein [Pusillimonas sp. T7-7] Length = 546 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 189/521 (36%), Positives = 283/521 (54%), Gaps = 22/521 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P N Y+SD L + + H++ L+ GE + +A+ AN + P+L Sbjct: 10 NQVPELGDYNLYTSDIALQEGVRREGAQSHEDALQHYGERLGRAETFAMAQEANRHKPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 Y G R D+V FHP+W +R + G+H S W K AH RAA + Sbjct: 70 ETYDRLGHRVDRVRFHPSWCRFMRMAFLQGMHSSAWS-----APGKGAHVARAATYLMHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDW----APKIFSREYDPTNKAPMQKTSVAIGL 200 QLEAG L ++TSA++ L + W AP ++S YD + + KTS+ IG+ Sbjct: 125 QLEAGSLCPVTMTSAAIPVLK-----QESWFDTLAPLLYSSRYDERDLPLVDKTSMLIGM 179 Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + G Y L+GHKWF SSP SDA ++LA + CF Sbjct: 180 GMTEKQGGSDLRSNTTRAVALGTGGRGMPYHLTGHKWFFSSPTSDAHLVLAGHDDVFSCF 239 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR L+DG+ N + QRLKNK+GN SNA+ E+EF + G L+G+ + +M Sbjct: 240 YVPRWLDDGNRNSVHIQRLKNKMGNASNASAEVEFQDATGVLVGEAGRGIATLVEMASYT 299 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD + S + +R + +A+H+AR R G L +QP+M+ + D++L+ AAT L+ RL Sbjct: 300 RLDCVLGSAALLRQGVVQALHHARHRVAFGQALSEQPLMQSVLMDLSLESEAATVLALRL 359 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +FD E AY RI+ P K+W CK A + E ME GG+GYIE+ +AR YRE Sbjct: 360 ARAFDNDGHDPLEQAYRRILTPAAKFWICKRTIAALGECMEVWGGNGYIEDAPMARLYRE 419 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISL 493 +P NSI GSGN M LDVL L++ L + +L++D ++V ++L Sbjct: 420 APVNSIWEGSGNVMCLDVLRGLKRHPELAAVMLESLQRDCADEPMLKQRVASLLSLLTLA 479 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + AR + +++ L A+ L R +AD F+ +RF Sbjct: 480 GPDQEAAARHIAQELVLLVQASLLRRHAPPVLADAFIHSRF 520 >gi|269126024|ref|YP_003299394.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310982|gb|ACY97356.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 543 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 194/535 (36%), Positives = 282/535 (52%), Gaps = 9/535 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P + +LL L E+ LG + AQE R+AN P L Sbjct: 8 FNQAPPLEDYDLADDPALLEGLEREGAGWASAEVHELGRLAGTRRAQEWGRLANEYPPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VE+HPAWH L+ ++ GLH + W S R+ AH RAA+ Y+ Sbjct: 68 RTHDRYGHRIDEVEYHPAWHELMTVAVTHGLHAAPWADS-----REGAHVARAAKFYVW- 121 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +++AGH S+T + + AL P + + P + R YD + P+ K ++ G+ +TE Sbjct: 122 RVDAGHGCPISMTYSVVPALRHNPELAAQYEPLLVQRTYDFGLRPPLTKAALLAGMSMTE 181 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T+ DG Y L GHKWF S+PM D F++LAQ G + CFL+PR+L D Sbjct: 182 KQGGSDVRANTTTATPQPDGSYRLVGHKWFTSAPMCDIFLVLAQAPGGLTCFLLPRVLPD 241 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N + RLK+K+GNRSNA+ E+E+ + + +G+ + +M LD I + Sbjct: 242 GSLNPMRIMRLKDKLGNRSNASSEIEYEDAVAWRVGEEGRGVRTIIEMVNSTRLDCLIGA 301 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA- 383 +GMR + A H+A R G LIDQP+M+ +AD+A++ AAT L RLA + D A Sbjct: 302 AAGMRQGVTVAAHHAAHRKAFGAYLIDQPLMRNVLADLAVESEAATTLMMRLAGAADRAI 361 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + EAA+ R+ + KYW K PA AEA+EC+GG+GY EE + R +RESP NSI Sbjct: 362 RGDAAEAAFKRLALAVGKYWVTKRWPAHAAEALECLGGNGYAEESGMPRLFRESPLNSIW 421 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKEDKGLA 501 GSGN LD L + K E F+ +EQ G+ I R DS++ + Sbjct: 422 EGSGNVAALDALRAMAKQPQCLEAFFAEVEQAAGADRHLDAAIRRAKDSLTDTATLELRT 481 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 R + E + L A+ L R G +AD F +R + L + II+ Sbjct: 482 RRVAELLTLVLQASLLVRYGHPAVADAFCVSRLGGDWGGAFGTLPAGLDLGPIIE 536 >gi|161501903|ref|NP_458811.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] Length = 546 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 15 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 75 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 130 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518 >gi|213428656|ref|ZP_03361406.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213612677|ref|ZP_03370503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289829967|ref|ZP_06547418.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513441|pir||AI1050 probable acyl Co-A dehydrogenase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505502|emb|CAD06854.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi] Length = 540 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 279/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|325676593|ref|ZP_08156271.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325552771|gb|EGD22455.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 545 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 191/534 (35%), Positives = 292/534 (54%), Gaps = 8/534 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P I +A +L AL E+ +G AQ L +A + P L Sbjct: 9 NQVPPLIDYDAADYPPILEALQREGAHHALDEIHRVGRLAGGAEAQALGDLAEAHPPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+VE+ PA+H L+ ++ GLH + W +P R QAH IRAA+ + Q Sbjct: 69 THDRYGNRIDEVEYDPAYHQLMDTAVELGLHGAPW---ADP--RPQAHLIRAAKNAVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 ++AGH S+T A + AL P + + P + ++ YDP +AP+ K + G+ +TEK Sbjct: 124 VDAGHGCPISMTYAVVPALRHDPELALQYEPLLTAKVYDPELRAPLTKPGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T++ DG Y ++GHKWF S+PMSD F++LAQ G + CFL+PR+L DG Sbjct: 184 QGGSDVRAGTTRAVPQPDGSYLVTGHKWFTSAPMSDIFLVLAQAPGGLTCFLLPRILPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N + QRLK+K+GN SNA+ E+E+ + + +GD + +M + LD I + Sbjct: 244 SRNAMFLQRLKDKLGNHSNASSEVEYDDAVAWRVGDEGRGVRTIIEMVNMTRLDCTIGTA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +GMR+ +A+A H+A R G LIDQP+M+ +AD+A++ A+T ++ LA D A + Sbjct: 304 TGMRLGVAQAAHHAAHRSAFGAHLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHADN 363 Query: 386 RSEEAAYARIMA-PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +A+ R +A ++KY+ CK PA AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 364 GDPQASILRRVALAVSKYYVCKRGPAHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LDVL + + E F L+ G + + L+ + + + AR Sbjct: 424 GSGNVAALDVLRAMARQPESVEAFFDELDASAGGDQRLDTAVEKLKGAFTDVASLEHRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + ++ALA A L R G +AD F +R + L + A IID Sbjct: 484 SVVGEMALALQGALLVRYGHPAVADAFCASRLSGEWGTVFGTLPTGLDLASIID 537 >gi|226363576|ref|YP_002781358.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242065|dbj|BAH52413.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 561 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 187/538 (34%), Positives = 286/538 (53%), Gaps = 8/538 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +NQ P I +A +L AL +EL +G S AQ +A + P L Sbjct: 8 VNQVPPLINFDAADYAPILEALQREGAHDALEELHDVGRLAGSEEAQRWGDLAEAHPPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VE+ PA+H L+ ++ GLH + W +P AH +RAA++ + Sbjct: 68 RTHDRYGNRIDEVEYDPAYHRLMTTAVEMGLHGAPW---ADP--HPHAHLVRAAKMAVWG 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q++AGH S+T A + AL + + + P + +R YDP P+ K + G+ +TE Sbjct: 123 QVDAGHGCPISMTYAVVPALRHNRALAEQYEPLLTARVYDPALHPPLTKAGLIAGMSMTE 182 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ +DG Y L+GHKWF S+PMSD F++LAQ G + CF +PR+L D Sbjct: 183 KQGGSDVRAGTTRAVPQADGSYVLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G+ N + QRLK+K+GN SNA+ E+E+ +L+G+ + +M + LD I + Sbjct: 243 GTRNRMHLQRLKDKLGNHSNASSEVEYDEAVAWLVGEEGRGVPTIIEMVNMTRLDCTIGT 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +GMRV A+A H+A R G L+DQP+M+ +AD+A++ AAT ++ LA D A Sbjct: 303 ATGMRVGTAQAAHHAVHRSAFGAHLVDQPLMRNVLADLAVESEAATTVALWLAALTDRAT 362 Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + E A RI ++KY+ CK P AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 363 AGDEHANTLRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVW 422 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLA 501 GSGN LD L + K + F L+ G+ + + L+ S A Sbjct: 423 EGSGNVAALDTLRAMAKQPETLQVFFDELDASAGADTRLDAAVAHLKSSFGDVDTLAHRA 482 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 R + +ALA + L R G +AD F +R + S L + A II+ + Sbjct: 483 RRVVGDMALALQGSLLVRHGHPAVADAFCVSRLGGDWGSVFGTLPTGVDTAAIIERAF 540 >gi|229494713|ref|ZP_04388471.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229318380|gb|EEN84243.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 563 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 197/537 (36%), Positives = 286/537 (53%), Gaps = 31/537 (5%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76 P + LNQ +N + D++LV +A + EL +GE V S Q A + Sbjct: 14 PHRTHAVLNQSVPRTDVNEFVLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L + G R D+VE+HP++H ++ ++ G H S W +P + A+ R Sbjct: 74 ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA L +Q+E GH S+T A + +L P V W P+ SR Y P AP K S Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAAIWTPRALSRSYTPELDAP-GKASA 187 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 G+ +TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSDAF++LAQ EG Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247 Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G CFL+PR+L DG+ N QRLKNK+GN+SNA+ E+E T G ++G+ Sbjct: 248 AGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M LD + S +GMR S+AEA+ +AR R G +L DQP M +AD+AL+ A Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AT + RLA + DE + +E A+ R+ + KYW CK P EA+EC+GG+GY E+ Sbjct: 368 ATITALRLARAQDE-DANEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL----------EKGTNLFEQLFSTLEQDLGS 478 +AR YRE P ++ GSGN + LDVL + ++ NL L+Q L Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDREINLARGNNPVLDQHL-- 484 Query: 479 SGKKVITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +V L + ++ D AR + E +ALA A+ + R +D F+ R Sbjct: 485 --DRVRRQLGELATMAPADAQFRARTVVEAMALALQASLMVRHSPAASSDAFIAARL 539 >gi|261342843|ref|ZP_05970701.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus ATCC 35316] gi|288314886|gb|EFC53824.1| acyl-CoA dehydrogenase family protein [Enterobacter cancerogenus ATCC 35316] Length = 540 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 188/509 (36%), Positives = 280/509 (55%), Gaps = 13/509 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71 +H + ++F NQP N + SD L +A +++LL G+ + + + Sbjct: 1 MHWQTHTVF--NQPSPLSNSNLFLSDCALRDAVAR--EGAEWDMDLLASIGQQLGTAESL 56 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W E RK Sbjct: 57 ELGRLANVNPPELLRYDAMGGRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARKG 112 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 + RAAR L AQ+EAG L ++T +A+ + L P+ + W + YDP Sbjct: 113 SFVARAARFVLHAQVEAGTLCPITMTFAATPLLLQALPKPFESWRNPLLGDRYDPHLAPG 172 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ + Sbjct: 173 GQKRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAK 232 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E EF + G+LLG+ + Sbjct: 233 GGLSCFFVPRFLLDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQIL 292 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L D A+ S MR +L+ A+++A +R G LIDQP+M+ ++ +AL + T Sbjct: 293 KMGGLTRFDCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMREVLSRMALVLEGQT 352 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D+ ++ +E A+AR+ P K+ CK +AEAME +GG+GY E+ + Sbjct: 353 ALLFRLARAWDK-RADPQEMAWARLFTPAAKFSVCKAGIPFVAEAMEVLGGTGYCEDNEL 411 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 R YRE P NSI GSGN M LDVL +L K + + L Q G + + Sbjct: 412 PRLYREMPVNSIWEGSGNIMCLDVLRVLTKQPGMLDLLSDDFAQVKGQDRHFDRSWRQLQ 471 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYR 519 L K + R + +++L + + + R Sbjct: 472 QKLRKPQEAQGREIARQLSLLGAGSQMLR 500 >gi|256784373|ref|ZP_05522804.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289768252|ref|ZP_06527630.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289698451|gb|EFD65880.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 557 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 196/550 (35%), Positives = 285/550 (51%), Gaps = 27/550 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYN 80 NQ P G + ++SD LV + P+ +E L LG S QE AN + Sbjct: 10 NQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWGAQANAH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+V+FHPAWH LL + + GL W R H RAA Sbjct: 70 PPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL-TDAWSR-------PGGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG+ S+T A++ AL P + +W P++ SR YD + K V G+ Sbjct: 122 LMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKAGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252 G+TEK+GG+D+ A ++ + ++ DG Y L+GHKWF S+PMSD F++LA+ EG Sbjct: 182 GMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGTVRAEGN 241 Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G CFLVPR+L DG+ N QRLK+K+GNRSNA+ E+EF+ T+ +G + Sbjct: 242 GGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEGRGVPTI 301 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM LD + S MR ++A+A+H+ R G L DQP+M+ +AD+A++ AA Sbjct: 302 IDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLAVESEAA 361 Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 T L RLA + D A E E A R+ P KYW K V+ EA EC+GG+GY+EE Sbjct: 362 TTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGNGYVEES 421 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486 + R RESP NS+ G+GN LDVL L + + + + G+ + I Sbjct: 422 GLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRLDAAIRG 481 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546 L ++ +G AR L E++AL A L R ++AD F +R + + L Sbjct: 482 LLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGAAFGTLP 541 Query: 547 GRFNAAHIID 556 + A +++ Sbjct: 542 PTLDLAAVVE 551 >gi|167035823|ref|YP_001671054.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166862311|gb|ABZ00719.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 550 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 195/526 (37%), Positives = 284/526 (53%), Gaps = 13/526 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQEL 73 +HQ +++ NQPP G N Y D L F + ++ G Q Sbjct: 3 LHQYAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMQA- 61 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R AH Sbjct: 62 GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHVLMRTAVEHGLPSLPW---AEP--RAGAH 116 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RA+ YL +Q EAG ++T A++ AL P + + W PKI + EYDP N K Sbjct: 117 VARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPELAEYWLPKILACEYDPRNVGDRHK 176 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQV 249 V +G+ +TEK+GGTD+ A T++ + Y L GHKWF S+PM DAF+ LAQ Sbjct: 177 AGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDAFLTLAQT 236 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 E + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + Sbjct: 237 EKGLSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ AA Sbjct: 297 IEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALESEAA 356 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ALS R+ + ++ ++A +AR++ + KYW CK APA+I EA EC+GG+GY+E+ Sbjct: 357 LALSLRMGQALEQLDD-PQQAHFARLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSI 415 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILR 488 + R YRE+P NS GSGN LDVL L K + + LF+ L G I L+ Sbjct: 416 LPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFTELGDGHGDPRLAAHIGNLK 475 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + + AR LTE IALA A L AG ++D F+ +R Sbjct: 476 GAFADTGDMQYRARQLTEDIALALQAKLLLEAGNAVVSDAFIGSRL 521 >gi|302539970|ref|ZP_07292312.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302457588|gb|EFL20681.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 508 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 179/482 (37%), Positives = 265/482 (54%), Gaps = 13/482 (2%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 +G S Q+ ARMA + P LH + G R D+VE+HPA+H L+ ++ G H + W Sbjct: 1 MGARAGSAEVQDWARMAEEHHPVLHTHDRYGHRIDEVEYHPAYHQLMTAAVESGQHAAAW 60 Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 + R H RAA Y AQ E GH S+T A++ AL P + + P + + Sbjct: 61 AET-----RPGRHLARAATFYAFAQAEPGHGCPISMTYAAVPALRAEPELAAAYEPLLTA 115 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSP 238 R YD +AP+ K + G+ +TEK+GG+D+ A T++ S DG Y L+GHKWF S+P Sbjct: 116 RTYDFGLRAPLTKRGLIAGMSMTEKQGGSDVRANTTEAVPSSADDGTYLLTGHKWFTSAP 175 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 MSD F+ LAQ V CFLVPR+L DG+ N L QRLKNK+GNR+NA+ E+E+ + Sbjct: 176 MSDVFLTLAQAPEGVTCFLVPRVLPDGTRNALHLQRLKNKLGNRANASSEVEYDRAVAWR 235 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +G+ + +M + LD I S +GMR L +A+H+ R G LIDQP+M+ Sbjct: 236 IGEPGRGVRTIVEMVSVTRLDCVIGSAAGMRAGLRQALHHCEHRRAFGAELIDQPLMRNV 295 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEAME 417 +AD+A++ AAT L+ RLA + D A++ A R + ++KYW CK AEA+E Sbjct: 296 LADLAVESEAATTLAMRLATALDRAEAGDAGEAALRRLGLAVSKYWVCKRGATHAAEALE 355 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL----- 472 C+GG+GY+E+ + R YRE+P SI GSGN LDVL L++ T + + + + Sbjct: 356 CLGGNGYVEDSGMPRLYREAPLQSIWEGSGNVAALDVLRALDRETGALDAVLAEVDAAAG 415 Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532 + + L ++ + + LAR L E++ L + L R +AD F + Sbjct: 416 ADARLDAAAARLRALLPQLADPQRAQVLARRLAEQMTLVLQGSLLVRYSHPAVADAFCAS 475 Query: 533 RF 534 R Sbjct: 476 RL 477 >gi|121604749|ref|YP_982078.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593718|gb|ABM37157.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 550 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 175/446 (39%), Positives = 257/446 (57%), Gaps = 17/446 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP + N + + L AL N P + L LG + + Q AR+AN + P+ Sbjct: 8 FNQPEPLVNYNLFEGNQPLRDALKFNAPGLDTAGLMQLGARLGTADMQTHARLANVHAPE 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + G R D+VEFHP++HAL+ ++ GLH + W P H RAA L Sbjct: 68 LHTHDRFGRRIDQVEFHPSYHALMTEAVGAGLHGTPWAHHESP----SPHVERAAGFMLF 123 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +LE L S+T A AL P ++ DW+P + SR+YDP K K V +G+G+T Sbjct: 124 TELEPSSLCPISMTYAVTPALRGNPAIYADWSPGLTSRQYDPMLKVWSDKPGVTMGMGMT 183 Query: 204 EKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 EK+GG+D+ A T++ + DG + ++GHKWF S+PM DAF++LAQ + C Sbjct: 184 EKQGGSDVRANTTRA--VPDGTDGWGQRFAVTGHKWFFSAPMCDAFLILAQAPAGLSCLF 241 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR+L DGS N + QRLK+K+GN++NA+ E+EFS +L+G+ + M + Sbjct: 242 LPRVLPDGSLNAIRIQRLKDKLGNKANASSEVEFSAASAWLVGEEGRGVPQILAMGSMTR 301 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD A+ + MR +L+ A+++ +R G LI QP+M+ +AD+A++ AA ALS RLA Sbjct: 302 LDCALGTSGLMRQALSLALNHTAQRSAFGQPLIGQPLMRNVLADLAIESEAACALSIRLA 361 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---IARHY 434 FD ++ + A +R++ P+ K+W CK A EAMEC+GG+GY+EE +AR Y Sbjct: 362 RCFDH-QNDAHGQALSRLLTPVAKFWICKRGSAFAQEAMECLGGNGYVEEGGEGIMARIY 420 Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460 RE P NSI G+GN M LD+L L K Sbjct: 421 REMPVNSIWEGAGNIMALDLLRALRK 446 >gi|104783742|ref|YP_610240.1| acyl-CoA dehydrogenase AidB [Pseudomonas entomophila L48] gi|95112729|emb|CAK17457.1| putative acyl-CoA dehydrogenase (AidB) [Pseudomonas entomophila L48] Length = 551 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 197/530 (37%), Positives = 285/530 (53%), Gaps = 21/530 (3%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCT 69 +HQ +++ NQPP G N Y D L F S + L G +++ Sbjct: 3 LHQFAETHEVTNQPPSLDGANLYRLDLPLQEWSRRFGAGWAESRIDAYGALAGGPLMTA- 61 Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 +AN + P+ ++ G R D VEFHPA+H L+R ++ GL W EP R Sbjct: 62 ----GFLANAHKPEFSSHDRYGHRIDLVEFHPAYHELMRTAVEHGLPSLPWA---EP--R 112 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 AH RA+ YL +Q EAG ++T A++ AL P + W PKI +REYDP N Sbjct: 113 AGAHVARASMTYLHSQAEAGTGCPLTMTFAAVPALRLQPALAGYWLPKILAREYDPRNIG 172 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIM 245 K V +G+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ Sbjct: 173 DRHKAGVTLGMAMTEKQGGTDVRANTTRAYPVGAPGPGQPYELVGHKWFCSAPMCDAFLT 232 Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 LAQ + + CFL+PR D N QRLKNK+GN SNA+ E+EF +++G+ Sbjct: 233 LAQTDKGLSCFLLPRHRPDDQRNQFYIQRLKNKLGNCSNASSEVEFRGALAWMVGEEGRG 292 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +M + D + S + MR +L +A H+ R V G +L +QP+M+ +AD+AL+ Sbjct: 293 VPTIIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLADLALE 352 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA ALS R+ + D+ ++A ++R++ + KYW CK AP +I EA EC+GG+GY+ Sbjct: 353 SEAALALSLRMCQALDQLDD-PQQAHFSRLVTAVGKYWICKRAPGMINEAAECLGGAGYV 411 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-KKVI 484 E+ + R YRE+P NS GSGN LDVL L K + + LFS L G + I Sbjct: 412 EDSILPRLYREAPVNSTWEGSGNVQCLDVLRALSKEPGVLDALFSELGDGHGDARLAAFI 471 Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L+ + + + + AR LTE IALA A L AG ++D F+ +R Sbjct: 472 GNLKGAFADTGDIQYRARQLTEDIALALQAKLLLEAGNATVSDAFIGSRL 521 >gi|21224435|ref|NP_630214.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|13276833|emb|CAC33951.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] Length = 557 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 196/550 (35%), Positives = 285/550 (51%), Gaps = 27/550 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYN 80 NQ P G + ++SD LV + P+ +E L LG S QE AN + Sbjct: 10 NQAPPLTGYDVFTSDRALVEAVGRQPAGEAREEALAELSGLGRSCGSWQTQEWGAQANAH 69 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L + G R D+V+FHPAWH LL + + GL W R H RAA Sbjct: 70 PPVLRTHDRYGHRVDEVDFHPAWHRLLGKGVSAGL-TDAWSR-------PGGHVRRAAAF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + Q+EAG+ S+T A++ AL P + +W P++ SR YD + K V G+ Sbjct: 122 LMWTQVEAGNCCPLSMTHAAVPALRADPELAAEWEPRLTSRVYDRELRPAHLKAGVLFGM 181 Query: 201 GLTEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252 G+TEK+GG+D+ A ++ + ++ DG Y L+GHKWF S+PMSD F++LA+ EG Sbjct: 182 GMTEKQGGSDVRANSTAARPLAEDGTYELTGHKWFCSAPMSDGFLVLARAPGGTARAEGN 241 Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G CFLVPR+L DG+ N QRLK+K+GNRSNA+ E+EF+ T+ +G + Sbjct: 242 GGGLTCFLVPRVLADGTRNVFLIQRLKDKLGNRSNASAEVEFAGTWARRVGAEGRGVPTI 301 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM LD + S MR ++A+A+H+ R G L DQP+M+ +AD+A++ AA Sbjct: 302 IDMVAATRLDCVLGSAGLMRQAVAQAVHHCAYREAFGAKLADQPLMRNVLADLAVESEAA 361 Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 T L RLA + D A E E A R+ P KYW K V+ EA EC+GG+GY+EE Sbjct: 362 TTLGLRLAAACDAAAGGDERERALLRLAVPAAKYWVTKRCAPVVVEAAECLGGNGYVEES 421 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486 + R RESP NS+ G+GN LDVL L + + + + G+ + I Sbjct: 422 GLPRLVRESPLNSVWEGAGNVQALDVLRALGREPAALDAYLTEVGAARGADHRLDAAIRG 481 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546 L ++ +G AR L E++AL A L R ++AD F +R + + L Sbjct: 482 LLTELADLAAAEGRARLLAERLALVLQGALLVRYAPPEVADAFCASRLGGDGGAAFGTLP 541 Query: 547 GRFNAAHIID 556 + A +++ Sbjct: 542 PTLDLAAVVE 551 >gi|114320872|ref|YP_742555.1| acyl-CoA dehydrogenase domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227266|gb|ABI57065.1| acyl-CoA dehydrogenase domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 559 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 176/459 (38%), Positives = 254/459 (55%), Gaps = 11/459 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP N Y D+ L + + L G + EL AN P+L Sbjct: 22 NQPPPLQAYNLYRQDAALREGVHRYRAGWAEAGLVRQGAWAGRPEVIELGFQANEQPPRL 81 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+V +HPA+H L+RR++ GLH + W R+ P AH RAAR YL A Sbjct: 82 HTHDRFGHRVDEVRYHPAYHRLMRRALTQGLHAAPW-RNPGP----GAHVARAARYYLQA 136 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH ++T A++ AL P + W K+ + +YDP N K +V IG+ +TE Sbjct: 137 QVEAGHGCPVTMTFAAVPALRRQPDLAASWLDKLLALDYDPRNCPVAAKKAVTIGMAMTE 196 Query: 205 KRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GG+D+ A T++ G Y L GHK+F+S+PMSDAF++LAQ + + CFL+PR Sbjct: 197 KQGGSDVRANTTRAYPLGTPGPGEAYELVGHKYFVSAPMSDAFLVLAQTDAGLSCFLLPR 256 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DG N L Q+LK K+GN +NA+ E E +++G+ + DM + D Sbjct: 257 WRPDGGRNPLQIQQLKRKMGNVANASSETELRGALAWMVGEPGRGVRTIIDMVAMTRYDC 316 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S +G+R + +A+H+ R R GG L+DQP+M +AD+AL+ AA ++ RLA + Sbjct: 317 TIGSAAGLRQAAVQALHHCRHRRAFGGRLVDQPLMANLLADLALESEAALQVALRLAGAL 376 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E+A + R+ P+ KYW CK P EAME IGGSG +E+ + R +RESP N Sbjct: 377 DRPDAPREQALF-RLATPVAKYWVCKRTPGHAYEAMEAIGGSGVMEDCILPRLFRESPIN 435 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 +I GSGN LDVL +EK + + LE+ G+ Sbjct: 436 AIWEGSGNIQCLDVLRAVEKAPDTLDAFLDELERARGAD 474 >gi|307731335|ref|YP_003908559.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307585870|gb|ADN59268.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 569 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 199/553 (35%), Positives = 293/553 (52%), Gaps = 33/553 (5%) Query: 8 RRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLS 67 +R + Q H+ + NQ P N +S+D L + + H++ L LS Sbjct: 2 QRHSFGQTHEVT------NQVPPLADYNLFSTDVALANALERDGAAWHRDALLRHGAALS 55 Query: 68 CTAQ-ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 LA +AN +TP+L + P GER D +EFHPAWH LL +GLH + +P Sbjct: 56 TPDTLALAELANRHTPELVTHSPRGERIDALEFHPAWHELLALLRREGLHALPFS---DP 112 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 + A R A +L AQ+E+G L ++T AS+ L P++ K+++R +DP Sbjct: 113 --QPGAMAARCAGYFLHAQIESGSLCPLTMTFASIPVLQREPQLFDTLRDKLYARGHDPR 170 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDA 242 + QK S IG+G+TEK+GG+D+ + +Q + I+ G Y L GHKWF S+P DA Sbjct: 171 DLPLAQKHSAMIGMGMTEKQGGSDVRSNQTQARAIAAGGRGGAYELIGHKWFFSAPQCDA 230 Query: 243 FIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 ++LA+ VG CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + FG ++G Sbjct: 231 HLVLARTHDHVGLSCFFVPRFTPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIG 290 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 D + +M LD I S + MR +L +AIH+AR R G L DQP+M+ +A Sbjct: 291 DEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLA 350 Query: 361 DIALDIAAATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMA 408 D+AL+ AAT L RLA +F++ + + E A+ RI+ P KYW CK Sbjct: 351 DLALESEAATVLFMRLARAFEQSADAAPASSAASSTATLAERAWRRIVTPAAKYWVCKRT 410 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 EAME GG+GY+E +AR YRE+P NSI GSGN M LDVL +E+ + L Sbjct: 411 LEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQAL 470 Query: 469 FSTLEQDLGSSGKKVITILRDSISL---CKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 F+ + D + + + + +L + + AR + ++I L + A L + Sbjct: 471 FAQWQADAAAHPALGAALGKLAATLNGPAEHREASARRIAQQIVLIAQATLLVAHAPAAV 530 Query: 526 ADVFLENRFLDNC 538 A+ F+ R D C Sbjct: 531 AEAFIATRLADGC 543 >gi|309787690|ref|ZP_07682301.1| protein aidB [Shigella dysenteriae 1617] gi|308924440|gb|EFP69936.1| protein aidB [Shigella dysenteriae 1617] Length = 537 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 187/519 (36%), Positives = 279/519 (53%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + +LL + M Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIVWLLEQEGEGIRLILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L + G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQ 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + L R +T ++ L A + + +A + + Sbjct: 474 LRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 512 >gi|194442803|ref|YP_002043631.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401466|gb|ACF61688.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 540 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ V M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHVLKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|330987628|gb|EGH85731.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 549 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + E +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEMWLPKVLSTEYDPRNVGIAHKRGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|168464739|ref|ZP_02698642.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632759|gb|EDX51213.1| protein AidB [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 540 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGGGAEMLRHASPPLAQAWCQ 512 >gi|226309402|ref|YP_002769362.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226188519|dbj|BAH36623.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 563 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 194/533 (36%), Positives = 285/533 (53%), Gaps = 23/533 (4%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76 P + LNQ +N + D++LV +A + EL +GE V S Q A + Sbjct: 14 PHRTHAVLNQSVPRTDVNEFQLDTVLVEGVARHDADWATSELTDIGELVGSAGFQHDAEL 73 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L + G R D+VE+HP++H ++ ++ G H S W +P + A+ R Sbjct: 74 ANTVIPELKTFDRWGNRIDEVEYHPSYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA L +Q+E GH S+T A + +L P V W P+ SR Y P AP K S Sbjct: 129 AAAFMLFSQVEPGHACPISMTHAVIPSLELQPDVAALWTPRALSRSYTPELDAP-GKASA 187 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 G+ +TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSDAF++LAQ EG Sbjct: 188 IFGMSMTEKQGGSDVRANTTIAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247 Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G CFL+PR+L DG+ N QRLKNK+GN+SNA+ E+E T G ++G+ Sbjct: 248 AGEGLSCFLLPRILPDGTRNIFRIQRLKNKLGNKSNASSEIELDGTVGTMIGEPGRGVRT 307 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M LD + S +GMR S+AEA+ +AR R G +L DQP M +AD+AL+ A Sbjct: 308 IIEMVSQTRLDCILGSTAGMRQSVAEAVWHARHRSAFGAVLADQPAMTSVLADLALESEA 367 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AT + RLA + DE + +E A+ R+ + KYW CK P EA+EC+GG+GY E+ Sbjct: 368 ATITALRLARAQDE-DADEQEKAFRRLATAVAKYWICKRGPHHSYEALECLGGNGYTEDF 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KK 482 +AR YRE P ++ GSGN + LDVL + + + + G++ + Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDHEVNLARGNNPVLDHHLDR 486 Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 V L + ++ D L AR + E +ALA A+ + R +D F+ R Sbjct: 487 VRRQLGELATMAPADAQLRARTVVEAMALALQASLMVRHSPAASSDAFIAARL 539 >gi|207859522|ref|YP_002246173.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206711325|emb|CAR35703.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 540 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|238910535|ref|ZP_04654372.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 540 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|322615539|gb|EFY12459.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618599|gb|EFY15488.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621988|gb|EFY18838.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627712|gb|EFY24503.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631019|gb|EFY27783.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637762|gb|EFY34463.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642426|gb|EFY39030.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644005|gb|EFY40553.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650919|gb|EFY47304.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653563|gb|EFY49891.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659748|gb|EFY55991.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662041|gb|EFY58257.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666210|gb|EFY62388.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672630|gb|EFY68741.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676060|gb|EFY72131.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680544|gb|EFY76582.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684562|gb|EFY80566.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192877|gb|EFZ78103.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197247|gb|EFZ82387.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201636|gb|EFZ86700.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206150|gb|EFZ91112.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213158|gb|EFZ97960.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215532|gb|EGA00276.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219517|gb|EGA04002.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227820|gb|EGA11974.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228990|gb|EGA13119.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236398|gb|EGA20474.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238697|gb|EGA22749.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241852|gb|EGA25881.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247999|gb|EGA31936.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254670|gb|EGA38481.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258271|gb|EGA41948.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263583|gb|EGA47104.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265821|gb|EGA49317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270265|gb|EGA53713.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 540 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKTLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|167717592|ref|ZP_02400828.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei DM98] Length = 472 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 181/453 (39%), Positives = 259/453 (57%), Gaps = 14/453 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 19 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 79 ETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 134 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 193 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 194 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 253 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 254 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 313 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 314 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 373 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 374 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 433 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 +P NSI GSGN M +DVL +E+ + LF Sbjct: 434 APVNSIWEGSGNVMCIDVLRAIEREPDAAAALF 466 >gi|197249522|ref|YP_002149291.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213225|gb|ACH50622.1| protein AidB [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 540 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|168822494|ref|ZP_02834494.1| protein AidB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205341093|gb|EDZ27857.1| protein AidB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088803|emb|CBY98561.1| Protein aidB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 540 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLNEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|289625806|ref|ZP_06458760.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648411|ref|ZP_06479754.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 2250] gi|330867201|gb|EGH01910.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330871089|gb|EGH05798.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 549 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + E +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQAAHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|168245165|ref|ZP_02670097.1| protein AidB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448363|ref|YP_002048419.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194406667|gb|ACF66886.1| protein AidB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336072|gb|EDZ22836.1| protein AidB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 540 Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 184/509 (36%), Positives = 277/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAIGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LIDQP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIDQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEECELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRGLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|161617648|ref|YP_001591613.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161367012|gb|ABX70780.1| hypothetical protein SPAB_05511 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 540 Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|167553775|ref|ZP_02347521.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205321868|gb|EDZ09707.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 540 Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|71737641|ref|YP_276496.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558194|gb|AAZ37405.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320330538|gb|EFW86517.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. race 4] gi|330873632|gb|EGH07781.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 549 Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 189/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + E +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K +G+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATLGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|198244552|ref|YP_002218260.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939068|gb|ACH76401.1| protein AidB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 540 Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|319951106|ref|ZP_08024959.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4] gi|319435266|gb|EFV90533.1| isovaleryl CoA dehydrogenase [Dietzia cinnamea P4] Length = 545 Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 186/521 (35%), Positives = 284/521 (54%), Gaps = 17/521 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 LNQ P + ++ Y+ + L +A F P + +G +V + Q A +AN +TP Sbjct: 13 LNQAPPRVDVDEYALNPALQEAVAVFSPHARVERFHEIGRHVGTEQYQHDAELANTHTPV 72 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 H++ G R D++EFHP++H ++ S+ GLH S W +P + A+ RAA L+ Sbjct: 73 HHSHDRWGNRVDEIEFHPSYHRIMEYSVAHGLHTSAW---ADP--GQGANVERAAGFMLV 127 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EAGH S+T A + +L +P + +W P + S YDP + P K+ V G+ +T Sbjct: 128 SQVEAGHGCPLSMTHAVVPSLRLSPELAAEWEPALLSTVYDPELRDPATKSGVLFGMAMT 187 Query: 204 EKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 EK+GG+D+ A T+ + + DG + L GHKWF S+P SDAF++LAQ + CFLVPR+L Sbjct: 188 EKQGGSDVRANTTTAEPVGDGDCHVLRGHKWFCSAPQSDAFLVLAQAPEGLSCFLVPRVL 247 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 G N QRLK+K+GN+SNA+ E+EF T G+++G+ + +M LD + Sbjct: 248 PGGERNPFLVQRLKDKLGNKSNASSEVEFDGTLGWMVGEPGRGVRTIIEMVGRTRLDCVL 307 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + +GMR +AEA +AR R G L+DQP M +AD+ L+ AAT + RLA+++D Sbjct: 308 GAAAGMRQGVAEAAWHARHRAAFGATLVDQPAMAAVLADLQLESEAATWTALRLASAYDN 367 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 E A Y R+ + KYW CK P E++EC+GG+GY E +AR YRE P ++ Sbjct: 368 ----EEFAPYRRLATAVAKYWVCKRGPNHAYESLECLGGNGYTEAFPLARRYREQPVLAV 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDSISLCKE 496 GSGN + LDVL + + + L LG ++V ++ + + Sbjct: 424 WEGSGNVIALDVLRAMTREPESVAAFDAELAAQLGGHELYDRHVERVRALIGRAAADPGA 483 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 G+AR L E +ALA A L +A+ F R D+ Sbjct: 484 APGIARRLVEAMALAQQGAVLLAHAPAPVAEAFCLARLGDD 524 >gi|168263270|ref|ZP_02685243.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347910|gb|EDZ34541.1| protein AidB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 540 Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLVPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|326330029|ref|ZP_08196343.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] gi|325952237|gb|EGD44263.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] Length = 551 Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 191/536 (35%), Positives = 286/536 (53%), Gaps = 9/536 (1%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMA 77 SD NQ P G N + D+ L A++ + L LG S AQE R+A Sbjct: 4 SDIRRVTNQAPPLAGHNVVTGDAALSAAVLRHADEETLDSLVSLGAEAGSAEAQEHGRLA 63 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P+L Y G R D+V FHP+WH L+ R++ GL + W + AH RA Sbjct: 64 NRFHPELVPYDRYGNRIDEVSFHPSWHWLMERAVGHGLAAAPWAPAGAGDEAGHAHVRRA 123 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A +Q E GHL S+T A++ AL + +W P++ S YD + P +K Sbjct: 124 AGFLAWSQTEPGHLCPISMTYAAVPALRADESLAAEWVPRLASTIYDFGLRDPAEKLGAL 183 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G+G+TEK+GG+D+ ++ + + +Y L GHKWF S+PM+D F++LAQ + CFL Sbjct: 184 AGMGMTEKQGGSDVRQNITEARPLGGDVYELHGHKWFTSAPMNDVFLVLAQAPDGLTCFL 243 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR+L G N L RLK+K+GNRSNA+ ELE T + LG + +M Sbjct: 244 LPRVLPGGERNRLDVVRLKDKLGNRSNASAELELRGTTAYRLGAEGRGVRTIIEMVAATR 303 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD + S + MR ++AEA + R GG L D+P+M+ +AD+A++ AATAL+ RLA Sbjct: 304 LDCVLGSAALMRRAVAEASWHVAHRSAFGGTLADKPLMQNVVADLAVESEAATALAMRLA 363 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D E+ A RI P+ K+W CK PA +AEA+EC+GG+GY+EE + +RES Sbjct: 364 AAVDRPDDLHEQ-ALRRIGLPLAKFWVCKRTPAHVAEALECLGGNGYVEESVMPLLFRES 422 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITILRDSI 491 P NS+ GSGN LDVL +++ ++ + + + G+ + + +L +S+ Sbjct: 423 PLNSVWEGSGNVNALDVLRAIQREPSVLDAWITEVGSAKGADRRYDRAVDSTLALLGESM 482 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 +E + AR L +A + L R G ++AD+F +R L T+ ML G Sbjct: 483 GSPEELERSARRLAGSMAALLQGSLLVRYGSEEVADIFCASR-LSGHGGTYGMLAG 537 >gi|111020455|ref|YP_703427.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819985|gb|ABG95269.1| probable AidB protein [Rhodococcus jostii RHA1] Length = 563 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 196/533 (36%), Positives = 289/533 (54%), Gaps = 23/533 (4%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARM 76 P + LNQ +N ++ D++L + + EL +G V S T Q A + Sbjct: 14 PHRTHTVLNQSVPRTDVNEFTLDTVLSEGVRRHDAGWATGELTGIGALVGSATFQHDAEL 73 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L + G R D+VE+HPA+H ++ ++ G H S W +P + A+ R Sbjct: 74 ANTIIPELKTFDRWGNRIDEVEYHPAYHRIISAAVAHGAHTSAW---ADP--KPGANVAR 128 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA + AQ+E GH S+T+A++ +L P V W P+ SR Y P AP K S Sbjct: 129 AAAFMMFAQIEPGHSCPISMTNAAIPSLDLQPDVAAIWKPRALSRSYTPELDAP-GKASA 187 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 G+ +TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSDAF++LAQ EG Sbjct: 188 IFGMSMTEKQGGSDVRANTTVAKPAGRGGPGADYLLTGHKWFCSAPMSDAFLVLAQAEGA 247 Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G CFL+PR+L DG+ N QRLKNK+GN+SNA+ E+E T G ++G+ Sbjct: 248 GGEGLSCFLLPRILPDGTRNVFRIQRLKNKLGNKSNASSEIELDGTVGVMVGEPGRGVRT 307 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M LD + S +GMR S+AEA+ +AR R G +L DQP M +AD+AL+ A Sbjct: 308 IIEMVARTRLDCVLGSTAGMRQSVAEAVWHARHRSAFGKVLADQPAMTSVLADLALESEA 367 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AT + RLA + DE S +E ++ R+ + KYW CK P EA+EC+GG+GY E+ Sbjct: 368 ATVTALRLARAHDEDAS-EQERSFRRLATAVAKYWICKRGPHHAYEALECLGGNGYTEDF 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVIT 485 +AR YRE P ++ GSGN + LDVL + + + + + GS+ + + Sbjct: 427 PLARRYREQPVMAVWEGSGNVIALDVLRAMTREPDSVAAFDAEVNLARGSNAVLDEHLDR 486 Query: 486 ILRDSISLCKED----KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + R L ED + AR + E +ALA A+ L R +AD F++ R Sbjct: 487 VRRQLGELATEDPARAQSRARTVVESMALALQASLLTRFSPAAVADTFIDARL 539 >gi|168239671|ref|ZP_02664729.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735634|ref|YP_002117317.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711136|gb|ACF90357.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287665|gb|EDY27056.1| putative acyl-CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 540 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 183/509 (35%), Positives = 277/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAYPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGDGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|162139504|ref|YP_219238.2| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717323|gb|EFZ08894.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 546 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 15 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 74 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 75 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 130 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 131 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 190 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 191 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 250 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + + + LD A+ Sbjct: 251 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 311 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 370 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 430 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 489 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 490 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 518 >gi|224586216|ref|YP_002640015.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62130454|gb|AAX68157.1| putative acyl-CoA dehydrogenase; adaptive response (transcription activated by Ada) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224470744|gb|ACN48574.1| probable acyl Co-A dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 540 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPTTFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + + + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|200388139|ref|ZP_03214751.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605237|gb|EDZ03782.1| protein AidB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 540 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + + + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|145225662|ref|YP_001136340.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145218148|gb|ABP47552.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 552 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 191/550 (34%), Positives = 278/550 (50%), Gaps = 19/550 (3%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 D+ NQ P + N +S L +L+ E+ LG S AQ +A+ Sbjct: 3 DTHVVTNQVPPLVDFNPAASPVLAESLVREGGGWGADEVADLGALAGSDRAQRWGDLADR 62 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 + P LH + G R D+VE+ PA+H L+ ++ GLH + W R AH +RAA+ Sbjct: 63 HRPVLHTHDRYGHRVDEVEYDPAYHELMSVAVAHGLHAAPWADD-----RAGAHVVRAAK 117 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + E GH+ S+T A + AL P + + P + SR+YDP K P K + G Sbjct: 118 TSVWTP-EPGHMCPISMTYAVVPALRHNPELAAIYEPLLTSRDYDPELKLPTTKAGITAG 176 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252 + +TEK+GG+D+ A T+Q DG Y L GHKWF S+PM D F++LAQ GR Sbjct: 177 MSMTEKQGGSDVRAGTTQATPNGDGSYSLRGHKWFTSAPMCDVFLVLAQAAGRGERSDGG 236 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + CF +PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ + Sbjct: 237 SGGLSCFFLPRILPDGTRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVATI 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M L LD + S + MR L A H+A+ R G LIDQP+M+ +AD+A++ AA Sbjct: 297 IEMVNLTRLDCTLGSATSMRNGLMRAAHHAQHRSAFGAYLIDQPLMRNVLADLAVEAEAA 356 Query: 370 TALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 T L+ R+A + D A + E RI KYW CK A AEAMEC GG+GY+E+ Sbjct: 357 TMLAMRMAGATDHAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECFGGNGYVEDS 416 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITI 486 + R YRE+P I GSGN LD L + + LF L G + + + Sbjct: 417 GMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPECVDVLFDELGIATGHDPRLDRHVAG 476 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLH 546 LR + + AR + E I+LA + L R G +A+ FL +R L Sbjct: 477 LRPQFDDLESIQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRLDGQWGGAFGTLP 536 Query: 547 GRFNAAHIID 556 + A I+D Sbjct: 537 TGLDLAPILD 546 >gi|311281267|ref|YP_003943498.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter cloacae SCF1] gi|308750462|gb|ADO50214.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacter cloacae SCF1] Length = 540 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 183/459 (39%), Positives = 267/459 (58%), Gaps = 15/459 (3%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71 +H + ++F NQP N + SD L +A +++LL G+ + + + Sbjct: 1 MHWQTHTVF--NQPLPLNNSNLFLSDCALREAVAR--EGAGWDIDLLASIGQQLGTAESL 56 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L + P GER D V FHPAWH L++ + +H W + R Sbjct: 57 ELGRLANANPPELLRFDPSGERVDDVRFHPAWHLLMQGLCANRVHNLAWKEA----ARDG 112 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAP 190 + RAAR L AQ+EAG L ++T A+ L+T P DW + S YD T+ AP Sbjct: 113 SFVARAARFVLHAQVEAGTLCPITMTFAATPLLLTHLPAAFADWRAPLQSDRYD-THLAP 171 Query: 191 M-QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 QK + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ Sbjct: 172 GGQKRGLLIGMGMTEKQGGSDVLSNTTRAEKQSDGTYRLLGHKWFFSVPQSDAHLVLAQA 231 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G + CF +PR L DG N + +RLK+K+GNRSNA+ E+EF + G+L+G+ + Sbjct: 232 KGGLSCFFLPRFLPDGQRNAVRLERLKDKLGNRSNASSEVEFFDATGWLIGEEGEGVRQI 291 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M L D A+ S MR +L+ A+++A +R G L+DQP+M++ ++ +AL + Sbjct: 292 LKMGGLTRFDCALGSHGLMRRALSVALYHAHQRQAFGKNLVDQPLMRQVLSRMALQLEGQ 351 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TA FRLA ++D + + +EEA +AR+ P K+ CK +AEAME +GG GY E+ Sbjct: 352 TAFLFRLARAWDRSTA-AEEALWARLFTPAAKFALCKAGIPFVAEAMEVLGGIGYCEDNE 410 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 + R YRE P NSI GSGN M LDVL +L K + E L Sbjct: 411 LPRLYREMPVNSIWEGSGNIMCLDVLRVLAKQPGVQELL 449 >gi|89899335|ref|YP_521806.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89344072|gb|ABD68275.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 562 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/507 (35%), Positives = 273/507 (53%), Gaps = 13/507 (2%) Query: 35 NAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93 N Y+ D+ L A+ EL G+ S EL +AN P+ + G R Sbjct: 31 NMYTQDAALREAVQREGGQWAEGELSEFGQMTGSADYLELGNLANKFQPEFDTHDRFGNR 90 Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 D V+FHP++H L++ SI GLH S W R AH RAA+ +L Q+EAGH Sbjct: 91 IDLVKFHPSYHQLMKTSIEHGLHASPWT-----APRAGAHVARAAKSFLHGQVEAGHGCP 145 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 ++T A++ AL + W PK+ +R YDP N QK V IG+ +TEK+GG+D+ Sbjct: 146 ITMTFAAVPALRLQSDLASVWEPKVTARVYDPRNVPVEQKQGVTIGMAMTEKQGGSDVRT 205 Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 +++ + G Y L GHK+F+S+PM DAF++LAQ G + CFL+PR DGS N Sbjct: 206 NSTRAYPVGTGGPGQAYELVGHKYFVSAPMCDAFLVLAQAPGGLSCFLLPRWRPDGSKNP 265 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + RLK K+GN SNA+ E E +++G+ + +M + D I S +GMR Sbjct: 266 MQVLRLKKKMGNASNASSETELRGALAWMVGEEGRGVRNIIEMVSMTRFDCMIGSSAGMR 325 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 ++ ++A+H+ R G +L QP+M+ +AD+AL+ AAT L+ R+A + D + +E Sbjct: 326 MAASQALHHCSVRSAFGQVLNQQPLMQNVLADLALESEAATTLTMRMARAMDN-RFEEQE 384 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 R++ + KYW CK P EAMECIGGSG +E+ + R YRE+P N+I GSGN Sbjct: 385 DLLVRLVTAVGKYWICKRTPNHAYEAMECIGGSGVMEDSMMPRLYREAPVNTIWEGSGNV 444 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLARFLTEK 507 LDVL L K + + F+ + Q G+ + I L + + + AR + ++ Sbjct: 445 QCLDVLRALSKTPAVVDAFFAEVNQARGAQALLDRHIAALATDLKDLADFEYRARDVVDR 504 Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534 +ALA A+ L R ++D F E+R Sbjct: 505 MALALQASLLVRHAPAFVSDAFCESRL 531 >gi|197264167|ref|ZP_03164241.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242422|gb|EDY25042.1| protein AidB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 540 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + + + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKIGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|330976861|gb|EGH76890.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 549 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 188/518 (36%), Positives = 270/518 (52%), Gaps = 13/518 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + +AN + P+ Sbjct: 14 NQPPPLDGANLYRIDVPLQEGSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANRHKPEF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+ +I G+ W + AH RAA YL Sbjct: 73 ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q + G ++T AS+ AL P + + W PK+ S EYDP+N K IG+ +TE Sbjct: 128 QADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPSNVGIAHKNGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ E + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTEKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 AR LTE IA+A L AG ++D F+ R + + Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLVSS 524 >gi|168231415|ref|ZP_02656473.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471657|ref|ZP_03077641.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458021|gb|EDX46860.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334317|gb|EDZ21081.1| protein AidB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 540 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 276/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ +++ D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLEDDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AE ME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEVMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|66047565|ref|YP_237406.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] gi|63258272|gb|AAY39368.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] Length = 549 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 191/518 (36%), Positives = 269/518 (51%), Gaps = 19/518 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + +AN + P+ Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHRPEF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+ +I G+ W EP + AH RAA YL Sbjct: 73 ASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWT---EP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRVGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSIVPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG- 499 S GSGN LDVL L K + LF L G + + S+ +D G Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGD---GHGDRHLAAHIGSLKAAFQDTGD 483 Query: 500 ---LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 484 IQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|309811482|ref|ZP_07705264.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] gi|308434533|gb|EFP58383.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] Length = 559 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 194/532 (36%), Positives = 284/532 (53%), Gaps = 25/532 (4%) Query: 22 LFAL---NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE----LELLGEYVLSCTAQELA 74 +FAL NQ + G +A +D L + F S H + L LG S A+E Sbjct: 4 VFALTPTNQADVMAGFDAVDADEALKDAASAFASHEHADVLGPLRELGVMAGSEEAREHG 63 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 AN TP+ A G R D VEFHP+WH L+RR + GL + W + AH Sbjct: 64 MAANTFTPRHRAVDRFGARTDAVEFHPSWHWLMRRGVEFGLAGAPWQDA-----SADAHL 118 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 RAA + +E GH+ ++T A++ AL + + +A + + Y+P + K Sbjct: 119 RRAAGFITWSGVEPGHVCPLTMTHAAVPALRADEALTQRYADGLAASVYEPGDLPAASKE 178 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKIS---DG--IYCLSGHKWFLSSPMSDAFIMLAQV 249 + G+G+TEK+GG+D+ ++ DG +Y L GHKWF S+P +D F++LAQ Sbjct: 179 GLLAGMGMTEKQGGSDVRTNVTEATPSGFDDDGAAVYSLRGHKWFTSAPTNDLFLVLAQA 238 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G + CF+VPR+ DG+ N L RLK+K+GNRSNA+ ELEF + + LGD + Sbjct: 239 PGGLTCFVVPRVHPDGTRNALRIVRLKDKLGNRSNASSELEFHDAYATRLGDEGAGVRTI 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M LD + S MR + +EA Y RRH GG+L D+P M+ +AD+A++ AA Sbjct: 299 IEMVSATRLDCVLGSAGLMRRATSEAAWYTARRHAFGGVLADKPAMQNVLADLAIESEAA 358 Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 TAL RLA S D +S E A+ R P+ K+W CK P +AEA+EC+GG+GY+ Sbjct: 359 TALGMRLAASVDRIESGDPGSEHERAFRRFALPLAKFWVCKRTPMHVAEALECLGGNGYV 418 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVI 484 EE + +RESP NSI GSG+ LDVL L + FE L+ G G V Sbjct: 419 EESGMPLLFRESPLNSIWEGSGSVNALDVLRALTRSPEAFEAFSRELDVTRGDHPGLDVA 478 Query: 485 T--ILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 T +L D +SL +D AR ++ ++A+ A+ L R+ + ++D F+ +R Sbjct: 479 TKQVLADVVSLTPDDAEYRARDISARMAVVLQASLLLRSAPSSVSDAFIASR 530 >gi|326328696|ref|ZP_08195035.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] gi|325953506|gb|EGD45507.1| acyl-CoA dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] Length = 544 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 192/523 (36%), Positives = 279/523 (53%), Gaps = 9/523 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELA 74 +H+ + NQ P + N +L L + E++ LG S AQE Sbjct: 1 MHEAHSTHVVTNQVPPLVDHNTAGDPALREGLEREGAAWALPEIDELGRLAGSAEAQEWG 60 Query: 75 RMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 R+A P+LH + G R D+VE+ PA+H L+ ++ GLH + W R AH Sbjct: 61 RLAERVPPRLHTHDRYGHRVDEVEYVPAYHQLMTTAVEHGLHAAPWADD-----RPGAHV 115 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 RAA+ Y ++AGH S+T A + AL P + + P + +REYD + P K Sbjct: 116 ARAAKFYTW-NVDAGHGCPISMTYAVVPALRANPELATRFEPLLTNREYDFGLRDPETKR 174 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + G+ +TEK+GG+D+ A T+ SDG Y L GHKWF S+PMSD F+ LAQ E V Sbjct: 175 GLIAGMSMTEKQGGSDVRANTTTATAQSDGTYVLRGHKWFTSAPMSDLFLTLAQTEAGVS 234 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVPR+L G N + + RLK+K+GN+SNA+ E+E+ G+L+G+ + +M Sbjct: 235 CFLVPRVLPGGERNAMRFMRLKDKLGNKSNASSEIEYDAATGWLVGEEGRGVRTIVEMVN 294 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + LD I S +GMR +L A H+A R G +LIDQP M+ +AD+ ++ AAT Sbjct: 295 MTRLDCVIGSSAGMRTALTMAAHHASHRSAFGKLLIDQPAMRNVLADLQVESEAATTAML 354 Query: 375 RLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RLA + D A E EAA RI +TKY+ CK AP ++ EA+EC+GG+GYIE+ +AR Sbjct: 355 RLAGANDRAIRGDEGEAALRRIALAVTKYYVCKRAPFMVNEALECLGGNGYIEDFDVARI 414 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491 YRE P SI GSGN LD L L K + + + E G+ + + L+ Sbjct: 415 YREMPLLSIWEGSGNVAALDALRALAKEPHTLDAFLAEAELAAGADARYDAALDRLKKEF 474 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + AR + E++AL + L R +AD F +R Sbjct: 475 TSFDDLELRARRIVEQLALVFQGSQLLRHAPAAVADAFCSSRL 517 >gi|226943070|ref|YP_002798143.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226717997|gb|ACO77168.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 571 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 201/533 (37%), Positives = 289/533 (54%), Gaps = 15/533 (2%) Query: 9 RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSC 68 R A+ +HQ +++ NQ P G N Y D L + + + L +Y Sbjct: 19 RSAVMDLHQYAETHEVTNQVPPLDGANLYRIDRPLQEWLRRYDGGWAERR--LDDYGALA 76 Query: 69 TAQELAR--MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 LA AN N P L ++ G R D+V+FHPA+H L+R +I GL W EP Sbjct: 77 GGPLLAAGFAANENRPLLRSHDRYGHRIDQVDFHPAYHELMRAAIAHGLPVLPWR---EP 133 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 R A RA +YL Q+EAG ++T AS+ AL P + + W P++ + EYDP Sbjct: 134 --RPGAQVARAGLMYLHNQVEAGTACPLTMTFASVAALRRQPEIAESWLPRVLAGEYDPR 191 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA 242 N +K +G+ +TEK+GGTD+ A +++ + Y L GHKWF S+PMSDA Sbjct: 192 NLPVERKGGATLGMAMTEKQGGTDVRANSTRAWPVGAAGPGQAYELLGHKWFCSAPMSDA 251 Query: 243 FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 F+ LA +G + CFL+PR DG N QRLKNK+GN SNA+ E+E+ +++G+ Sbjct: 252 FLTLAWSDGGLSCFLLPRHRPDGRRNEFYIQRLKNKLGNWSNASAEVEYRGALAWMIGEE 311 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M L D I S + MR +L +A+H+ R V G +L + +M+ +AD+ Sbjct: 312 GRGVPTILEMVGLTRFDCMIGSSALMRQALTQALHHCAHRLVGGQVLSEHALMQNVLADL 371 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL+ AA AL+ RLA + D A+ SE + AR++ I KYW CK AP +I EA EC+GG+ Sbjct: 372 ALESEAALALTLRLARALDHAEDESER-SLARLLTAIGKYWICKRAPEMIGEAAECLGGA 430 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 GY+EE + R YRE+P NSI GSGN LDVL +L K E LF L+ G + K Sbjct: 431 GYVEESILPRLYREAPVNSIWEGSGNVQCLDVLRVLGKEPEALEVLFDELDGGHGDARLK 490 Query: 483 V-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 I LR +++ E AR L E++A+ A L AG ++D F+ +R Sbjct: 491 ARIEWLRKALADRTEIHYCARRLVEELAVTLQAGLLLEAGNAAVSDAFIHSRL 543 >gi|107024480|ref|YP_622807.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116688141|ref|YP_833764.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105894669|gb|ABF77834.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116646230|gb|ABK06871.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 550 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 189/527 (35%), Positives = 293/527 (55%), Gaps = 18/527 (3%) Query: 19 SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 +DS A+ NQ + N +++D +L AL +L+ G + S +LA Sbjct: 2 TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTAQLADE 61 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN +TP+LHA+ G R D+V+FHPAWHALL + H+G S+ R +P R+ Sbjct: 62 ANQHTPELHAFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA YL Q+EAG L ++T A++ L P + K++S +YDP + K ++ Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRAI 176 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251 G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAG 236 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 CF VPR DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + + Sbjct: 237 SPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L+ + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA + Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ RLA++F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IA Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488 R +RE+P NSI GSGN M LDVL + + + LF L DLG+ ++ + LR Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474 Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + + R +++A+ + A L R ++D F+ R Sbjct: 475 AMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVSDAFVATRL 521 >gi|226309495|ref|YP_002769457.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226188614|dbj|BAH36718.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 545 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 189/534 (35%), Positives = 289/534 (54%), Gaps = 8/534 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P I +A +L AL S +E+ +G S AQE +A + P L Sbjct: 9 NQVPPLIDYDAAEYAPILEALHREEASDAAEEVHRVGVRAGSAQAQEWGDLAEEHPPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V + PA+H L+ ++ GLH + W +P AH +RAA++ + Q Sbjct: 69 THDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPW---VDP--NPHAHLVRAAKMAVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A + AL + + P + +R YD KAP+ K + G+ +TEK Sbjct: 124 TDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T++ SDG Y L+GHKWF S+PMSD F++LAQ G + CF +PR+L DG Sbjct: 184 QGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N + QRLK+K+GN SNA+ E+E+ + +++G+ + +M + LD I + Sbjct: 244 SLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRLDCTIGTA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +GMRV +A+H+A R G LIDQP+M+ +AD+A++ A+T ++ LA D A S Sbjct: 304 TGMRVGTLQAVHHANHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAALTDRATS 363 Query: 386 RSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A A RI ++KY+ CK P AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 364 GDAHAGALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLAR 502 GSGN LD L + K + F L+Q G + + + L + + + AR Sbjct: 424 GSGNVAALDTLRAMAKQPETLQVFFDELKQASGVDARFDQTVRDLEAAFGDFDDIEYRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + +ALA A+ L R G +AD F +R ++ S L + A I++ Sbjct: 484 KIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGIDIAPILE 537 >gi|330969464|gb|EGH69530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 549 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 190/515 (36%), Positives = 268/515 (52%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + +AN + P+ Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHKPEF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+ +I G+ W EP + AH RAA YL Sbjct: 73 ASHDRYGHRIDLVEFHPAYHQLMSTAIAHGIPSLPWT---EP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRVGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|320322677|gb|EFW78770.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. B076] Length = 549 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 188/515 (36%), Positives = 267/515 (51%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + E +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH R A YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARVAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYDP N K +G+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRGATLGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTEGIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|300705483|ref|YP_003747086.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957] gi|299073147|emb|CBJ44505.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 553 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 190/538 (35%), Positives = 291/538 (54%), Gaps = 28/538 (5%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N ++SD+ L + H + L + GE + + A AN P+ Sbjct: 10 FNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRVFGETLGAPRTLAWAAEANRYPPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D V F PAWHALL +GL + + R A +R A ++ Sbjct: 70 LHTHARTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D AP++++RE+D + QKT++ IG+G+T Sbjct: 125 AQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y L+GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR + GS N + QRLK+K+GNRSNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L+DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLVDQPLMRNVLADLALESQAATLLMMAL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY+EE +AR YRE Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494 +P NSI GSGN M LDVL + + + +L QD+G + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480 Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 G AR + + +AL + AA + D A+ F+ +RF H H + G Sbjct: 481 LHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534 >gi|88799657|ref|ZP_01115232.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297] gi|88777551|gb|EAR08751.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297] Length = 557 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 187/518 (36%), Positives = 286/518 (55%), Gaps = 15/518 (2%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 N PPL +N + SD +LL L +L LG V S + A AN P L Sbjct: 19 NTPPLLENINLFDSDLTLLECLDRGQAGWASGQLSELGAIVGSAERLQAAMEANRVRPAL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V FHP +H + S +GL S W+++ + AH RAA YL++ Sbjct: 79 ATHDRYGHRIDEVTFHPGYHDFMTLSKANGLTGSPWEKA-----QPGAHVARAAGSYLVS 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH ++T AS+ L+ P + +W PKI +R Y+P N +K SV IG+ +TE Sbjct: 134 QVEAGHCCPITMTFASVPTLLKQPDIADEWIPKILNRAYEPGNVPYFEKQSVTIGMAMTE 193 Query: 205 KRGGTDIAAITSQGQKIS-----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 K+GG+D+ A +++ + I DG + L GHK+F S+PM DAF++LA + + CFLVP Sbjct: 194 KQGGSDVRANSTRAEAIDPESPKDG-FELIGHKFFASAPMCDAFLVLAYTDVGLSCFLVP 252 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DGS N + + RLK+K+GN SNA+ E+E FG+L+G+ + +M L D Sbjct: 253 RWRPDGSKNPIQFLRLKDKMGNVSNASSEIELRGAFGWLIGEEGRGVANILEMVALTRFD 312 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + MR + + +H+ + R G LIDQP+M+ +AD+ L+ AAT L+FR+A + Sbjct: 313 CLVSSAAAMRQHMTQILHHTQHRAAFGKKLIDQPLMRNLLADLELEAEAATLLAFRVAQA 372 Query: 380 FD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D +A+ +E A+AR+ I KYW CK P EAME IGGSG +E + R YR++P Sbjct: 373 LDGQAQGHRDEGAFARLATAIGKYWVCKRQPNHAYEAMETIGGSGVMENSVMPRLYRDAP 432 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKE 496 N+I GSGN LD L +++ + + + +E + L + + L+ ++ ++ Sbjct: 433 INTIWEGSGNVQCLDALRAIQRDPDSLAAVMAEIELAKGLNAHFDDHLQGLQQQLTQTED 492 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR L + +ALA A+ + R A F + RF Sbjct: 493 LEFRARSLVQSLALALQASLMLRHMPTSHAHAFCDARF 530 >gi|330938240|gb|EGH41917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 549 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 188/516 (36%), Positives = 270/516 (52%), Gaps = 13/516 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + +AN + P+ Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANQHKPEF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q + G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLALAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DH-QDDDHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGTLKAAFQDTGDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535 AR LTE IA+A L AG ++D F+ R + Sbjct: 487 RARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522 >gi|317125027|ref|YP_004099139.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315589115|gb|ADU48412.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 545 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 185/462 (40%), Positives = 265/462 (57%), Gaps = 19/462 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY---VLSCTAQELARMANYNTP 82 NQ F+ + S D L + + V +E+ LGE S AQ+ R+A+ N P Sbjct: 8 NQVEPFVDRDFLSEDRALAEAVGRW--VAAEEVAPLGELGRLAGSPEAQDHGRLADANRP 65 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 L + G R D+VEFHP+WH L+ R++ GL W PV R AH RAA + Sbjct: 66 VLRTHDARGNRIDEVEFHPSWHWLMARAVGAGLTAEPWT---APVGRG-AHARRAAGFMI 121 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 +++EAGH S++ A+ AL + W PK+ SR YD + +K V G+G+ Sbjct: 122 WSRVEAGHGCPISMSYAAGPALRHDAELASRWLPKLASRTYDFGIRPLAEKAGVIAGMGM 181 Query: 203 TEKRGGTDI-----AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 TEK+GG+D+ A + G + Y L+GHKWFLS+PMSD F++LAQ + C + Sbjct: 182 TEKQGGSDVRANATTATLTPGGPLPGETYRLTGHKWFLSAPMSDVFLVLAQAPAGLTCLV 241 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR LEDG+ N QRLK+K+GN SNA+ E+EF T+G LGD + +M Sbjct: 242 VPRALEDGTRNPFALQRLKDKLGNHSNASSEVEFDGTWGSRLGDEGRGVRTIIEMVGATR 301 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD+ + S + MR ++ A+H+AR+R G +L+DQP+M+ +AD+AL+ AAT L+ RLA Sbjct: 302 LDTVLGSTATMRDAVTRAVHHARQRTAFGRLLVDQPLMRNVLADLALEAEAATVLAMRLA 361 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++FD + EA +ARI + KYW CK ++AEA+EC+GG+GY+EE +AR YRE+ Sbjct: 362 HAFD-----AGEADFARIGVAVGKYWVCKRTAPMVAEALECLGGNGYVEENVLARLYREA 416 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 P NSI GSGN LDV+ + + E L L + G S Sbjct: 417 PLNSIWEGSGNVNALDVIRAISREPASLEALTKELHRVRGVS 458 >gi|319442251|ref|ZP_07991407.1| isovaleryl CoA dehydrogenase [Corynebacterium variabile DSM 44702] Length = 548 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 190/525 (36%), Positives = 278/525 (52%), Gaps = 25/525 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQ + +N ++ D LV + F P L L+G V + + Q A +AN TP Sbjct: 7 FNQSAPRVDINEFTCDPALVEAVDTFAPDADSYRLGLIGAEVGTASYQHDADLANRITPV 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 ++ G R D+VEFHP++H ++ S++ GLH S W A+ RAA L+ Sbjct: 67 HTSHDRWGNRVDEVEFHPSYHRIMGFSVNQGLHTSAWAHP-----GPGANVERAAGFMLV 121 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +Q+EAGH S+T A + AL +P + + W PK+ S YDP + P K+S G+ +T Sbjct: 122 SQIEAGHGCPVSMTHAVVPALRKSPEIAEFWEPKLLSTSYDPELRDPATKSSAIFGMAMT 181 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--------- 254 EK+GG+D+ A T++ +DG + L+GHKWF S+P SDAF++LAQ G Sbjct: 182 EKQGGSDVRANTTRATSNADGTWSLTGHKWFCSAPQSDAFLVLAQTGEASGSGNADQALS 241 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVPR+L G N QRLK+K+GNRSN++ E+E T G+L+G+ + +M Sbjct: 242 CFLVPRILPGGGRNAFFIQRLKDKLGNRSNSSSEIELDGTVGWLVGEEGRGVPTIIEMVN 301 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 LD S +GMR +AEA +AR R G LIDQP M IAD+ ++ AAT + Sbjct: 302 RTRLDCIFGSAAGMRQGVAEAAWHARHRAAFGATLIDQPAMANVIADLQVESEAATWTAM 361 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RLA + D+ + R+ + KYW CK E++EC+GG+GY E +AR Sbjct: 362 RLAAAHDDDNLED----FRRLATAVAKYWVCKRGTHHAYESLECLGGNGYTELFPLARRL 417 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITILR 488 RE+P N++ GSGN + LDVL L + E + + + +G + ++ T+L+ Sbjct: 418 REAPVNAVWEGSGNVIALDVLRALARQPEAGEAFVAEMSRSVGVDERYDAQFNRMTTLLK 477 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 D+ S E LAR L E +AL A L +A FL R Sbjct: 478 DAASSPAEAPALARRLIESLALTLQAQTLLTHAPAPVASAFLAGR 522 >gi|170731486|ref|YP_001763433.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169814728|gb|ACA89311.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 550 Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 189/527 (35%), Positives = 290/527 (55%), Gaps = 18/527 (3%) Query: 19 SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 +DS A+ NQ + N +++D +L AL +L+ G + S LA Sbjct: 2 TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLADE 61 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN +TP+LH + G R D+V+FHP WHALL + H+G S+ R +P R+ Sbjct: 62 ANQHTPELHTFDRRGRRIDRVDFHPVWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA YL Q+EAG L ++T A++ L P + K++S +YDP + K S+ Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSI 176 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251 G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEDG 236 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 CF VPR DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + + Sbjct: 237 GPSCFYVPRWRPDGTKNAIEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L+ + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA + Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ RLA++F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IA Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488 R +RE+P NSI GSGN M LDVL + + + LF L DLG+ ++ + LR Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474 Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + + R +++A+ + A L R +AD F+ R Sbjct: 475 AMLAAPADTLEASGRVFAQRLAVVAQACLLRRDAPAAVADAFVATRL 521 >gi|120402280|ref|YP_952109.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119955098|gb|ABM12103.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 551 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 188/518 (36%), Positives = 270/518 (52%), Gaps = 9/518 (1%) Query: 20 DSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 D+ NQ P N +S L ALI E+ LG S AQ +A+ Sbjct: 3 DTHVVTNQVPPLEDFNPAASPVLAEALIREGGQWGADEVAELGALAGSAAAQRWGELADR 62 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P LH + G R D+VE+ PA+H L+ ++ GLH + W R +H +RAA+ Sbjct: 63 NRPVLHTHDRTGHRIDEVEYDPAYHQLMTVAVGHGLHAAPWADD-----RDGSHVVRAAK 117 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + E GH+ S+T A + AL P + + P + SR YDP P K + G Sbjct: 118 TSVWTP-EPGHICPISMTYAVVPALRHNPELAAVYEPLLTSRVYDPELAVPSAKPGITAG 176 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 + +TEK+GG+D+ A T++ DG Y L GHKWF S+PM D F++LAQ G + CF +P Sbjct: 177 MSMTEKQGGSDVRAGTTEATPNGDGTYSLRGHKWFTSAPMCDIFLVLAQAPGGLSCFFLP 236 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R+L DGS N + QRLK+K+GN +NA+ E+E+ +L+G+ + +M L LD Sbjct: 237 RILPDGSRNRMFLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLD 296 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ S + MR L A H+A+ R G LIDQP+M+ +AD+A++ AAT L+ R+A + Sbjct: 297 CALGSATSMRNGLMRATHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATMLAMRMAGA 356 Query: 380 FDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D A + E RI KYW CK A AEAMEC+GG+GY+E+ + R YRE+P Sbjct: 357 TDRAVRGDERETLLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRLYREAP 416 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 I GSGN LD L + + LF L G + + LR + + Sbjct: 417 LMGIWEGSGNVSALDTLRAMATRPECIDVLFDELAATDGHDARLDAHVQGLRPQLGDPET 476 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E I+LA + L R G +A+ FL +R Sbjct: 477 IQYRARQVAEDISLALQGSLLVRHGHPAVAEAFLASRL 514 >gi|33602382|ref|NP_889942.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33576821|emb|CAE33901.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 552 Score = 309 bits (791), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 193/533 (36%), Positives = 285/533 (53%), Gaps = 24/533 (4%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELAR 75 QP + NQ + Y +D +L A+ + EL G ++ E A Sbjct: 2 QPFLTHLVTNQVAPLEDYSLYETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAA 61 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 AN N+P+L AY P G R DKV FHPAW+AL+ + GLH W +PV AH Sbjct: 62 EANRNSPRLLAYDPTGHRQDKVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVA 116 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPM 191 RAA + Q+EAG L ++T A++ L P +DW ++SRE+D ++ Sbjct: 117 RAAAYLMQGQVEAGTLCPTTMTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIG 176 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLA 247 +K IG+GLTEK+GG+D+ ++ ++ + + Y L+GHKWFLS P +DA ++LA Sbjct: 177 RKRGALIGMGLTEKQGGSDLRSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLA 236 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + +GCF VPR + DG N + +RLK+K+GNRSNA+ E+EF +G +LG+ T Sbjct: 237 RTDEGLGCFFVPRWVPDGPRNAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTA 296 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +M LD + S + +R ++A+A+H+A +R G L+ QP+M+ +AD+AL+ Sbjct: 297 VLLEMAATTRLDCVLGSAALLRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESE 356 Query: 368 AATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AAT L+ RLA + DE R++ A A R+ P K W CK A A + E ME +GG+GY+ Sbjct: 357 AATVLALRLARAVDE---RADPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYV 413 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485 EE +AR YRE+P NSI GSGN M LDVL L + L L++ G Sbjct: 414 EEAPLARLYREAPVNSIWEGSGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQ 472 Query: 486 ILRDSISLCKE----DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L D ++L + + LAR + +A AA L R + F R Sbjct: 473 ALDDWLALVAQPDSVPQALARRVAAGLATLWQAALLIRHAPAPVGAAFAATRL 525 >gi|288937519|ref|YP_003441578.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22] gi|288892228|gb|ADC60546.1| acyl-CoA dehydrogenase domain protein [Klebsiella variicola At-22] Length = 545 Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 177/456 (38%), Positives = 258/456 (56%), Gaps = 9/456 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD+ L +A + +L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ A Sbjct: 59 GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLTWQED----AREGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P + +DW + S YDP Q Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPALFRDWLSPLLSDRYDPHLAPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D A+ S + MR + + A+++A +R G L+DQP+M++ + +AL + TA Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D + + E+A+AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 YRE P NSI GSGN M LDV+ +L K E L Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449 >gi|204926971|ref|ZP_03218173.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323636|gb|EDZ08831.1| protein AidB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 540 Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 277/509 (54%), Gaps = 7/509 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLSSIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDLQGQRLDDVRFHPAWHLLMQGLCANRVHNLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF + G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDAVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 GSGN M LDVL +L K +++ L + G + + L K D+ + R Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLE 531 +T+++ L A + R +A + + Sbjct: 484 EITQQLFLLGCGAEMLRHASPPLAQAWCQ 512 >gi|298489012|ref|ZP_07007035.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156510|gb|EFH97607.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 549 Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 189/515 (36%), Positives = 267/515 (51%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + E +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGA-LAGGPLMEAGFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYD N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAHKRGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQAAHHCAYRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTENIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|92114944|ref|YP_574872.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] gi|91798034|gb|ABE60173.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] Length = 550 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/516 (36%), Positives = 271/516 (52%), Gaps = 9/516 (1%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP+ + D L L P+ V + L L + Q LA AN+ P+L Sbjct: 17 NQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANHYPPEL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V + PA+H L+ + G H W+ H+ A LYL+ Sbjct: 77 RTFDRHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEG-----AGGHQAHIAALYLLT 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E G ++T A+ L V W P++ + +YDP K + G+ +TE Sbjct: 132 QVEPGFCCPITMTHAAYPVLRQDSAVLATWGPRLLAHDYDPRALPIGDKRAATFGMAMTE 191 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + T++ +DG L+GHKWF S+PMSDAF+ LA+ E +GCFLVPR D Sbjct: 192 KQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGIGCFLVPRFRPD 251 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G NG+ QRLK+K GNR+NA+ E+E+++ + +G + DM LD+A Sbjct: 252 GERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLDAATAP 311 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 MR +L EA H+A+ R G L DQP+M+R IAD+AL+ A+ AL R A +FD A Sbjct: 312 AGMMRQALREAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARAFDGAP 371 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 E A AR++ + K+W K PA +AEAMEC+GG GY+EE +AR YRE+P NSI Sbjct: 372 HDDHERALARLLPALAKFWHNKRGPAFMAEAMECLGGIGYVEEAPLARLYREAPVNSIWE 431 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED-KGLA 501 GSGN M LDV+ +L + L L G+ + + +L + E + A Sbjct: 432 GSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRLDATPETLEAQA 491 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 R+LT+++A AA L R N + + F R D Sbjct: 492 RWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDE 527 >gi|257482198|ref|ZP_05636239.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011338|gb|EGH91394.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 549 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 189/515 (36%), Positives = 266/515 (51%), Gaps = 13/515 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G Q +AN N P Sbjct: 14 NQPPPLDGANLYRIDVPLQEWSSRFGAGWAQPRIDAYGALAGGPLMQA-GFLANQNKPAF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D +EFHPA+H L+ +I G+ W +P + AH RAA YL Sbjct: 73 ASHDRYGHRIDLIEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T AS+ AL P + + W PK+ S EYD N K IG+ +TE Sbjct: 128 QAEPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDSRNVGIAHKRGATIGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR Sbjct: 188 KQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPR 247 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + D Sbjct: 248 HRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDC 307 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + Sbjct: 308 MIGSSALMRQALTQATHHCAHRAVSGRVLAEQPLMQNVLADLALESEAALALTLRMGRAL 367 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P N Sbjct: 368 DHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVN 426 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKG 499 S GSGN LDVL L K + LF L G I L+ + + + Sbjct: 427 STWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIAALKGAFQDTSDIQY 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 487 RARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|33596331|ref|NP_883974.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33566100|emb|CAE37000.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 552 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 189/513 (36%), Positives = 279/513 (54%), Gaps = 24/513 (4%) Query: 37 YSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95 Y +D +L A+ + EL G ++ E A AN N+P+L AY P G R D Sbjct: 22 YETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAAEANRNSPRLLAYDPTGHRQD 81 Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KV FHPAW+AL+ + GLH W +PV AH RAA + Q+EAG L + Sbjct: 82 KVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVARAAAYLMQGQVEAGTLCPTT 136 Query: 156 VTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +T A++ L P +DW ++SRE+D ++ +K IG+GLTEK+GG+D+ Sbjct: 137 MTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIGRKRGALIGMGLTEKQGGSDL 196 Query: 212 AAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 ++ ++ + + Y L+GHKWFLS P +DA ++LA+ + +GCF VPR + DG Sbjct: 197 RSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLARTDEGLGCFFVPRWVPDGPR 256 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N + +RLK+K+GNRSNA+ E+EF +G +LG+ T + +M LD + S + Sbjct: 257 NAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTAVLLEMAATTRLDCVLGSAAL 316 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +R ++A+A+H+A +R G L+ QP+M+ +AD+AL+ AAT L+ RLA + DE R+ Sbjct: 317 LRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALESEAATVLALRLARAVDE---RA 373 Query: 388 EEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + A A R+ P K W CK A A + E ME +GG+GY+EE +AR YRE+P NSI G Sbjct: 374 DPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEEAPLARLYREAPVNSIWEG 433 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE----DKGLA 501 SGN M LDVL L + L L++ G L D ++L + + LA Sbjct: 434 SGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQALDDWLALVAQPDSVPQALA 492 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + +A AA L R + F R Sbjct: 493 RRVAAGLATLWQAALLIRHAPAPVGAAFAATRL 525 >gi|94500182|ref|ZP_01306716.1| fadE8 [Oceanobacter sp. RED65] gi|94427755|gb|EAT12731.1| fadE8 [Oceanobacter sp. RED65] Length = 571 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/526 (35%), Positives = 284/526 (53%), Gaps = 22/526 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83 NQP NAY+SD L + F H+ EL G+ V S E AN P+ Sbjct: 25 FNQPSSLDPYNAYASDPALQHWVRIFDGAWHESELHTYGQRVGS-DLFEAGFAANKYKPE 83 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + GER D+V+FHP++H L++ +I G H W + AH RAA Y+ Sbjct: 84 FKPHNRFGERIDQVDFHPSYHLLMQTAIEAGHHSLPWCEK-----KPGAHVARAALEYMH 138 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q + G ++T A++ ALM P + K+W PKI + YD N +K + IG+ +T Sbjct: 139 TQADPGSGCPLTMTFAAVPALMHQPNIAKEWIPKITANHYDHRNIPFYEKQGLTIGMAMT 198 Query: 204 EKRGGTDIAAITSQG---QKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ---VEGR---V 253 EK+GG+D+ A T++ +K+ G Y + GHKWF S+PM DAF++LA V+G+ + Sbjct: 199 EKQGGSDVRANTTKAYPLEKVGSGEAYEIVGHKWFCSAPMCDAFLVLAHTYDVQGKSNGL 258 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFL+PR DG N + QRLK+K+GN SNA+ E+E+ F +++G+ + +M Sbjct: 259 SCFLLPRWRPDGRKNEMYVQRLKDKMGNVSNASSEVEYRGAFAWMIGEEGRGVRTIIEMV 318 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + D + S MR +LA+A H+ R G L +QP+M+ +AD+A++ AA A+S Sbjct: 319 SMTRFDCMVGSSGIMRQALAQAYHHTSGRAAFGKNLHEQPLMQNVLADLAIESEAALAIS 378 Query: 374 FRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 R+A+S D+ +S E EA ++R+ I KYW CK E MECIGG G +E+ + Sbjct: 379 MRVAHSLDKLQSNPEDEQEARFSRVATAIGKYWICKRTAQFTYECMECIGGVGVVEDNVL 438 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488 R YRESP N+I GSGN LDVL ++K + + + L + G + + L+ Sbjct: 439 PRLYRESPINAIWEGSGNVQCLDVLRAMQKDPKVVDAFMAELAKAHGRYDVFDQYLAALK 498 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 D + + AR + EK+ALA A+ L + DIA ++++R Sbjct: 499 DEFQDLQTLEYRARTVVEKLALAWQASTLIQFADRDIAKAYIDSRL 544 >gi|254246705|ref|ZP_04940026.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184] gi|124871481|gb|EAY63197.1| Acyl-CoA synthetase (AMP-forming) [Burkholderia cenocepacia PC184] Length = 1070 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 189/527 (35%), Positives = 291/527 (55%), Gaps = 18/527 (3%) Query: 19 SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 +DS A+ NQ + N +++D +L AL +L+ G + S LA Sbjct: 2 TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYGARLGSADTARLADE 61 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN +TP+LH + G R D+V+FHPAWHALL + H+G S+ R +P R+ Sbjct: 62 ANQHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFR--DP--RRGRWAAT 116 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA YL Q+EAG L ++T A++ L P + K++S +YDP + K ++ Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPLADKRAI 176 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251 G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEDG 236 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 CF VPR DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + + Sbjct: 237 GPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L+ + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA + Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ RLA++F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IA Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488 R +RE+P NSI GSGN M LDVL + + + LF L DLG+ ++ + LR Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDALR 474 Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + + R +++A+ + A L R +AD F+ R Sbjct: 475 AMLAAPTDTLEASGRVYAQRLAVVTQACLLRRDAPAAVADAFVATRL 521 >gi|86139246|ref|ZP_01057816.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85824090|gb|EAQ44295.1| possible acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 551 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/514 (36%), Positives = 279/514 (54%), Gaps = 10/514 (1%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 +N PP + +SSD L A+ +L G+ E A AN +P+ Sbjct: 16 INTPPHMGDQDLWSSDLPLREAIQREGADWAAPKLADFGKKAGRAEVLEQADQANRYSPE 75 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 + + G R ++V FHPA+HAL ++ +GL W+ + H AA Y+M Sbjct: 76 VKPFDRYGMRVNQVSFHPAYHALQELAVANGLSNFAWNNP-----KAGGHVTHAAMNYMM 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q+E G L ++T A++ L +P + ++W PK+ S EYD + +K +G+ +T Sbjct: 131 NQIEGGVLCPIAMTYAAIPTLKASPALAQEWLPKLLSTEYDKRDIPLSEKNGAQMGMFMT 190 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 EK+GG+D+ A +++ + +G Y L+GHK+F S+PMSDAF+ LA + + CFL+PR Sbjct: 191 EKQGGSDVRANSTRAVRDGEG-YRLTGHKFFCSAPMSDAFLTLAYTDEGLSCFLMPRFTP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG NGL QRLK+K+GN+SNA+ E+E + T+G +G + +M A Sbjct: 250 DGQRNGLFLQRLKDKLGNKSNASSEMELNQTWGLRVGAEGKGVKTIIEMVQGTRFYCAFG 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S + MR L +A+H+ R +LIDQP+M+ +AD+AL+ AATALS RL + DE Sbjct: 310 SAALMRQGLVQALHHTSHRSAFQKLLIDQPLMQNVLADLALESEAATALSLRLGRAIDEG 369 Query: 384 KSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ ++ AA ARI I KYW CK AP EAMEC GG GY+EE + R YRE+P NSI Sbjct: 370 EAGDKDAAALARIGTAIGKYWICKRAPNHTYEAMECHGGPGYVEESIMPRLYREAPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGL 500 GSGN + LDVL L++ S +E G + K + L+ +++ + + Sbjct: 430 WEGSGNVICLDVLRALQRDPEAGAAFLSEVETAKGGNALFDKSLDALKQALADPSDFQLR 489 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE +AL AA L R ++D F R Sbjct: 490 ARRLTEHMALIWQAALLVRFAPACVSDAFCATRL 523 >gi|78064774|ref|YP_367543.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77965519|gb|ABB06899.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 550 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 184/520 (35%), Positives = 283/520 (54%), Gaps = 19/520 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L ALI +L+ G + S LA AN++TP+L Sbjct: 10 NQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLADEANHHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 H + G R D+V+FHPAWHALL + H+G + S R+ AA YL Sbjct: 70 HTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRES-----RRGRWAATAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + K++S +YDP + +K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSNDYDPRDVPVAEKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLK+K+GNRSN++ E+E ++ +G +LGD + +M L+ Sbjct: 245 RWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA +LS RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL-----C 494 NSI GSGN M LDVL + + + + DLG +G+ I D++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAISREPDA-AEALFAELADLG-AGEPHIRAALDALRVMLAAPA 481 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + R +++A+ + A L R +AD F+ R Sbjct: 482 DTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRL 521 >gi|149927464|ref|ZP_01915718.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105] gi|149823737|gb|EDM82963.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105] Length = 570 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 184/496 (37%), Positives = 263/496 (53%), Gaps = 16/496 (3%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL +AN P+L + G R D V +H A+H L++ ++ +GLH W R+ Sbjct: 71 ELGFLANKYPPELDTHDRFGNRVDSVRYHGAYHELMKSALEEGLHSQPWTNP-----REG 125 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AH +R A+ ++ +Q+EAGH ++T AS+ + P V + KI R YDP N Sbjct: 126 AHVVRGAKAFMQSQVEAGHGCPVTMTFASIPSFRLQPEVAAIFESKILHRGYDPRNLPVD 185 Query: 192 QKTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 +K S+ +G+G+TEK+GG+D+ A T Q + +Y L GHKWFLS+PM D F++LA Sbjct: 186 EKLSITVGMGMTEKQGGSDVRANSTVATPVNQPGAGQMYSLVGHKWFLSAPMCDVFLILA 245 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 Q V CF VPR L DG+ N L RLK+K+GN+SNA+ E+EF G+L+GD Sbjct: 246 QTTAGVSCFAVPRWLPDGTKNALNVIRLKDKMGNKSNASSEVEFRGAQGWLIGDEGRGVP 305 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +M L D S MR LA AIH+ ++R G LIDQP+M+ +AD+ L+ Sbjct: 306 TIIEMVSLTRFDCMGASAGLMRAGLANAIHHCKQRAAFGAKLIDQPLMQNVLADLQLEYE 365 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A S R+A + D S EA AR+ + KYW CK AP E MECIGGSG +E Sbjct: 366 GAMAFSMRMARALDLKDSDEHEAHLARLATAVGKYWICKRAPQHSYEIMECIGGSGVMEN 425 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVIT 485 R +RES N I GSGN LDVL + K + + L + G + + + Sbjct: 426 SIYPRLFRESVINPIWEGSGNVQCLDVLRAIGKTPAVLMAFNAELNKARGGNSILDQYLD 485 Query: 486 ILRDS-ISLCKED-KGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 L D + L D GL AR + +++ALA A+ L R + +++ F +R H Sbjct: 486 RLNDQFMQLNPADMHGLQYSARTMVDQMALAFEASLLVRHAPDAVSEAFCASRLAAQGHH 545 Query: 541 THCMLHGRFNAAHIID 556 + L N II+ Sbjct: 546 NYGALPKGLNVKSIIE 561 >gi|290512257|ref|ZP_06551624.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55] gi|289775252|gb|EFD83253.1| acyl-CoA dehydrogenase [Klebsiella sp. 1_1_55] Length = 545 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 177/456 (38%), Positives = 257/456 (56%), Gaps = 9/456 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD+ L +A + +L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ A Sbjct: 59 GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----ARESAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Q Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D A+ S + MR + + A+++A +R G L+DQP+M++ + +AL + TA Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D + + E+A+AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 YRE P NSI GSGN M LDV+ +L K E L Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449 >gi|330952998|gb|EGH53258.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae Cit 7] Length = 549 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 190/520 (36%), Positives = 270/520 (51%), Gaps = 21/520 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYN 80 NQPPL G N Y D L F S + L G +++ +AN + Sbjct: 14 NQPPLLDGANLYRIDVPLQEWSRRFGAGWAQSRIDAYGALAGGPLMAA-----GFLANQH 68 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+ ++ G R D VEFHPA+H L+ +I G+ W +P + AH RAA Sbjct: 69 KPEFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWT---DP--QPGAHVARAAMS 123 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL Q + G ++T AS+ AL P + + W PK+ S EYDP N K IG+ Sbjct: 124 YLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVQSTEYDPRNVGIAHKRGATIGM 183 Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 +TEK+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CF Sbjct: 184 AMTEKQGGTDVRANTTRAFPVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCF 243 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + +M + Sbjct: 244 LLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMT 303 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ Sbjct: 304 RFDCMIGSSALMRQALTQATHHCAHRTVSGRLLAEQPLMQNVLADLALESEAALALTLRM 363 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + D E + R++ + KYW CK AP +I EA EC+GG+GY+E+ + R YRE Sbjct: 364 GRALDHLDD-DHEKRFVRLVTAVGKYWICKRAPGMINEAAECLGGAGYVEDSILPRLYRE 422 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCK 495 +P NS GSGN LDVL L K + LF L G I L+ + Sbjct: 423 APVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRQLAAHIGKLKAAFQDTG 482 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535 + + AR LTE IA+A L AG ++D F+ R + Sbjct: 483 DIQYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522 >gi|33593334|ref|NP_880978.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33572690|emb|CAE42613.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332382743|gb|AEE67590.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 552 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 189/513 (36%), Positives = 279/513 (54%), Gaps = 24/513 (4%) Query: 37 YSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95 Y +D +L A+ + EL G ++ E A AN N+P+L AY P G R D Sbjct: 22 YETDPVLQQAVRREGAAAFESELREHGAWLGRAQTLEAAAEANRNSPRLLAYDPTGHRQD 81 Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KV FHPAW+AL+ + GLH W +PV AH RAA + Q+EAG L S + Sbjct: 82 KVAFHPAWNALMTGIVARGLHSRAW---AQPV--PGAHVARAAAYLMQGQVEAGTLCSTT 136 Query: 156 VTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +T A++ L P +DW ++SRE+D ++ +K IG+GLTEK+GG+D+ Sbjct: 137 MTHAAVPLLAREPAGVIDYGRDWLDVLYSREFDASDAPIGRKRGALIGMGLTEKQGGSDL 196 Query: 212 AAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 ++ ++ + + Y L+GHKWFLS P +DA ++LA+ + +GCF VPR + DG Sbjct: 197 RSVATRAEPVGAPGRGQAYLLTGHKWFLSVPHADAHLVLARTDEGLGCFFVPRWVPDGPR 256 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N + +RLK+K+GNRSNA+ E+EF +G +LG+ T + +M LD + S + Sbjct: 257 NAVRLRRLKDKLGNRSNASAEVEFEQAWGAMLGEPGRGTAVLLEMAATTRLDCVLGSAAL 316 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +R ++A+A+H+A +R G L+ QP+M+ +AD+AL+ AAT L+ RLA + DE R+ Sbjct: 317 LRQAVAQALHHAAQRQAFGTALLAQPLMRVLLADLALENEAATVLALRLARAVDE---RA 373 Query: 388 EEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + A A R+ P K W CK A A + E ME +GG+GY+EE +AR YRE+P NSI Sbjct: 374 DPVARALVRVGTPAAKLWVCKRAIAALGECMEVLGGNGYVEEAPLARLYREAPVNSIWED 433 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE----DKGLA 501 SGN M LDVL L + L L++ G L D ++L + + LA Sbjct: 434 SGNVMALDVLRGLAREAEALPGLRDELDRARGVV-PAYDQALDDWLALVAQPDSVPQALA 492 Query: 502 RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R + +A AA L R + F R Sbjct: 493 RRVAAGLATLWQAALLIRHAPTPVGAAFAATRL 525 >gi|218551457|ref|YP_002385249.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469] gi|218358999|emb|CAQ91659.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ATCC 35469] Length = 547 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 185/515 (35%), Positives = 279/515 (54%), Gaps = 9/515 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 VH + ++F NQP N Y SDS L + + EL +G+ + + + EL Sbjct: 7 VHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 64 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN P+L Y G R D V FHPAWH L++ + +H W+ R + Sbjct: 65 GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 120 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 +RAAR + AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 121 VVRAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 180 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G Sbjct: 181 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 240 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF +PR L DG N + +RLK+K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 241 LSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 300 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +R V G LI+QP+M+ + +AL + T+L Sbjct: 301 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 360 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ +E +AR+ P K+ CK +AEAME +GG GY E+ + R Sbjct: 361 LFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGIPFVAEAMEVLGGIGYCEDSELPR 419 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L Q G + R Sbjct: 420 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAVRRFQQL 479 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527 L K + R +T ++ + A + R IA+ Sbjct: 480 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAE 514 >gi|213648985|ref|ZP_03379038.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 529 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 174/446 (39%), Positives = 256/446 (57%), Gaps = 7/446 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQL 468 GSGN M LDVL +L K +++ L Sbjct: 424 WEGSGNIMCLDVLRVLTKQHGVYDVL 449 >gi|332531004|ref|ZP_08406926.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella gracilis ATCC 19624] gi|332039565|gb|EGI75969.1| acyl-CoA dehydrogenase domain-containing protein [Hylemonella gracilis ATCC 19624] Length = 554 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 184/463 (39%), Positives = 267/463 (57%), Gaps = 27/463 (5%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73 +HQ D NQP + +N + + ++ AL + P + K LE LG+ S T Q Sbjct: 1 MHQTHD---VFNQPAPLVDVNLFEGNLAMRDALKVHAPGLDLKPLEALGQLAGSATLQVH 57 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQA 132 AR+AN + PQL + G R D+VEFHP++H L+ ++ GLH S W D + + A Sbjct: 58 ARLANAHGPQLRTHDRQGYRIDEVEFHPSYHILMAAAMKAGLHGSPWLDNT------RNA 111 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 H +RAA L +LE L S+T A AL +H++W+P + +R YDP Sbjct: 112 HVLRAACFMLFTELEPSMLCPISMTYAVTPALRANAAIHQEWSPGLGARAYDPALTLYKH 171 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 K + +G+G+TEK+GG+D+ A T++ G Y L+GHKWF S+PMSDAF++LAQ Sbjct: 172 KAGLTMGMGMTEKQGGSDVRANTTRAEPDGHDAWGARYRLTGHKWFFSAPMSDAFLVLAQ 231 Query: 249 VEGRVGCFLVPRLLED--------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 + CF +PR+L + G N L QRLK+K+GN++NA+ E+EF +L+G Sbjct: 232 TANGLSCFFLPRVLPEALSGSSTQGQHNALRIQRLKDKLGNKANASSEVEFEGALAWLVG 291 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + +M + LD A+ S MR +L +A+H+ R+R G LI+QP+MK +A Sbjct: 292 EEGRGIPQILEMGTMTRLDCALGSSGLMRQALTQALHHTRQRLAFGKTLIEQPLMKNVLA 351 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+AL+ AATAL+ RLA +FD+ E A AR++ P+ K+W CK EAMEC+G Sbjct: 352 DLALESEAATALALRLARTFDQPDD-PHEKAMARLLTPVAKFWICKRGAGFAQEAMECLG 410 Query: 421 GSGYIEERS---IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+GY+EE +AR YRE P NSI G+GN M LD+L L K Sbjct: 411 GNGYVEEGGEGVLARIYREMPVNSIWEGAGNIMALDLLRGLRK 453 >gi|161523296|ref|YP_001578308.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351932|ref|YP_001947560.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616] gi|160340725|gb|ABX13811.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189335954|dbj|BAG45024.1| putative acyl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 550 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 191/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL +L+ G + S LA AN +TP+L Sbjct: 10 NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + + G R D+VEFHPAWHALL ++G S+ R R+ AA YL Sbjct: 70 NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + + K++S +YD + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LGD + DM L+ Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA L+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDVL + + + LF+ L + LG+ ++ + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPRIRAALDALRAMLAAPAD 482 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR E++AL + A L R ++D F+ R ++ + G F+ H I Sbjct: 483 TLEASARLFAERLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538 Query: 556 D 556 D Sbjct: 539 D 539 >gi|262204088|ref|YP_003275296.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087435|gb|ACY23403.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 559 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 195/561 (34%), Positives = 290/561 (51%), Gaps = 34/561 (6%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELAR 75 QP + LNQ + +N Y +++L ++ + EL +G V S Q A+ Sbjct: 10 QPHLTHEVLNQSQPRVDVNEYELNTVLQEAVSRHDAGWADAELREIGALVGSEQFQHDAK 69 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 +AN TP LH + G R D+VE+HP++H ++ +I G H W +P + +H Sbjct: 70 LANTITPTLHTFDRWGRRIDEVEYHPSYHRIISAAISHGAHTRCW---ADP--QPGSHVA 124 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 RAA L Q+E GH S+T A + +L P V W PK S EY P A K S Sbjct: 125 RAAAFMLFGQIEPGHACPVSMTHAVIPSLELQPDVAALWVPKALSSEYSPELSA--DKPS 182 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEG 251 G+ +TEK+GG+D+ A T+ + G Y L+GHKWF S+PMSDAF++LAQ EG Sbjct: 183 AIFGMSMTEKQGGSDVRANTTVARPAGAGGPGTEYLLTGHKWFCSAPMSDAFLVLAQAEG 242 Query: 252 RVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 G CFL+PR+L DG+ N QRLK+K+GN+SNA+ E+E T +++G+ Sbjct: 243 PGGEGLSCFLLPRVLPDGTHNVFRIQRLKDKLGNKSNASSEIELDGTVAYMVGEPGRGVR 302 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +M LD + S +GMR S+AEA+ +AR R+ G L+DQP M +AD+AL+ Sbjct: 303 TIIEMVAQTRLDCVLGSAAGMRQSVAEAVWHARHRNAFGARLVDQPAMTAVLADLALESE 362 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AAT + RLA + DE SE A+ R+ + KYW CK P E++EC+GG+GY E+ Sbjct: 363 AATVTAMRLARAHDEDADDSER-AFRRLATAVAKYWICKRGPHHAYESLECLGGNGYTED 421 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 +A YRE P ++ GSGN + LDVL + + + + + GS +L Sbjct: 422 FPLAMRYREQPVMAVWEGSGNVIALDVLRAMTREPESVAAFDAEVSKARGSH-----PVL 476 Query: 488 RDSISLCKEDKG------------LARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535 + + D G AR + E +ALA A+ L + +A+ F+ R Sbjct: 477 DAHLDRLRVDLGELARLDAAGAQRRARSVVEGMALALEASLLVQYSPTPVAEAFVGARLG 536 Query: 536 DNCHSTHCMLHGRFNAAHIID 556 + + L G + I+D Sbjct: 537 ADRGFEYGTLPGGADLGAILD 557 >gi|206558451|ref|YP_002229211.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|198034488|emb|CAR50353.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 550 Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 187/527 (35%), Positives = 288/527 (54%), Gaps = 18/527 (3%) Query: 19 SDSLFAL-NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 +DS A+ NQ + N +++D +L AL +L+ + S LA Sbjct: 2 TDSTHAVTNQFDELVDYNLFATDLALRDALARAGADWAVPQLDAYAARLGSADTARLADE 61 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN +TP+L+ + G R D+V+FHPAWHALL + H+G S+ R R+ Sbjct: 62 ANRHTPELNTFDRRGRRIDRVDFHPAWHALLGQYRHEGF-VSLAFRD----ARRGRWAAT 116 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA YL Q+EAG L ++T A++ L P + K++S +YDP + K ++ Sbjct: 117 AAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRAI 176 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-G 251 G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G Sbjct: 177 WFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAG 236 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 CF VPR DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + + Sbjct: 237 SPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L+ + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA + Sbjct: 297 MATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALS 356 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ RLA++F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IA Sbjct: 357 LAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIA 415 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILR 488 R +RE+P NSI GSGN M LDVL + + + LF L DLG+ ++ + LR Sbjct: 416 RLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDEL-ADLGAGEPRIRAALDGLR 474 Query: 489 DSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + + R +++AL + A L R +AD F+ R Sbjct: 475 AMLAAPADTLEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRL 521 >gi|167813734|ref|ZP_02445414.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 91] Length = 453 Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 177/439 (40%), Positives = 253/439 (57%), Gaps = 14/439 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 19 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P + A R A +L A Sbjct: 79 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--QPGAMAARCAGYFLHA 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 134 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 193 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLV 258 K+GG+D+ + + + G Y L GHKWF S+P DA ++LA+ + G CF V Sbjct: 194 KQGGSDVRSNETHAYPLGAGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCFYV 253 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR DGS N + QRLK+K+GNRSNA+ E+EF N +G ++GD + +M L Sbjct: 254 PRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRL 313 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D I S + MR +L +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA+ Sbjct: 314 DCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAH 373 Query: 379 SFDE-AKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+E A +RS +A + RI+ P K+W CK EAME GG+GY+E +AR YRE Sbjct: 374 AFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYRE 433 Query: 437 SPANSILLGSGNAMVLDVL 455 +P NSI GSGN M +DVL Sbjct: 434 APVNSIWEGSGNVMCIDVL 452 >gi|221214279|ref|ZP_03587251.1| protein AidB [Burkholderia multivorans CGD1] gi|221165934|gb|EED98408.1| protein AidB [Burkholderia multivorans CGD1] Length = 550 Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 190/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL +L+ G + S LA AN +TP+L Sbjct: 10 NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + + G R D+VEFHPAWHALL ++G S+ R R+ AA YL Sbjct: 70 NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + + K++S +YD + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LGD + DM L+ Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA L+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDVL + + + LF+ L + LG+ ++ + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPRIRAALDALRAMLAAPAD 482 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR +++AL + A L R ++D F+ R ++ + G F+ H I Sbjct: 483 ALEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538 Query: 556 D 556 D Sbjct: 539 D 539 >gi|229491237|ref|ZP_04385065.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229321975|gb|EEN87768.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 545 Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 187/534 (35%), Positives = 289/534 (54%), Gaps = 8/534 (1%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ P I +A +L AL S + + +G S AQE +A + P L Sbjct: 9 NQVPPLIDYDAAEYAPILEALHREGASDALEGVHRVGIRAGSAQAQEWGDLAEEHPPVLR 68 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V + PA+H L+ ++ GLH + W +P AH +RAA++ + Q Sbjct: 69 THDRYGNRIDEVRYDPAYHQLMSTAVELGLHGAPW---VDP--NPHAHLVRAAKMAVWGQ 123 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +AGH S+T A + AL + + P + +R YD KAP+ K + G+ +TEK Sbjct: 124 TDAGHGCPISMTYAVIPALRHNADLAAQYEPLLTTRHYDSALKAPLTKPGLIAGMSMTEK 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T++ SDG Y L+GHKWF S+PMSD F++LAQ G + CF +PR+L DG Sbjct: 184 QGGSDVRAGTTRAVPQSDGSYLLTGHKWFTSAPMSDVFLVLAQAPGGLSCFFLPRVLPDG 243 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 S N + QRLK+K+GN SNA+ E+E+ + +++G+ + +M + LD I + Sbjct: 244 SLNNMYLQRLKDKLGNHSNASSEVEYRDALAWMVGEEGRGVRTIIEMVNMTRLDCTIGTA 303 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +GMRV +A+H+A R G LIDQP+M+ +AD+A++ A+T ++ LA D A + Sbjct: 304 TGMRVGTMQAVHHATHRSAFGANLIDQPLMRNVLADLAVESEASTTVAMWLAALTDHATA 363 Query: 386 RSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A A RI ++KY+ CK P AEA+EC+GG+GY+EE + R YRE+P S+ Sbjct: 364 GDAHASALRRISLAVSKYFVCKRGPIHAAEALECLGGNGYVEESRMPRLYREAPLLSVWE 423 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGLAR 502 GSGN LD L + K + F L++ G G + + L+ + + + AR Sbjct: 424 GSGNVAALDTLRAMAKQPETLQVFFDELKRASGVDGHFDQAVRDLQAAFGDFDDIEYRAR 483 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIID 556 + +ALA A+ L R G +AD F +R ++ S L + A I++ Sbjct: 484 KIVGDMALALQASLLLRYGHPAVADAFCASRLGNSWGSVFGTLPRGVDVAPILE 537 >gi|284031260|ref|YP_003381191.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283810553|gb|ADB32392.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 560 Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 194/532 (36%), Positives = 286/532 (53%), Gaps = 28/532 (5%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P G+N ++ D L AL + L +GE + A A AN + P L Sbjct: 9 NQAPPLQGVNFFTQDQALGDALRPHADLAKDSGLTAIGELAGTQEALSHALPANQHPPVL 68 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHP+WH L+ +++ GL + W R H RAA Y+ + Sbjct: 69 KTHDRYGHRVDEVEFHPSWHWLMDKAVGFGLQAAPWTSD-----RPAPHLARAAGFYVWS 123 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E GH S+T A++ AL T+ R+ +W P++ + EYD K V G+G+TE Sbjct: 124 QVEPGHACPVSMTYAAVPALRTSDRLAAEWIPRLAAPEYDVRRLPVADKAGVLAGMGMTE 183 Query: 205 KRGGTDI------AAITSQGQKIS--------------DGIYCLSGHKWFLSSPMSDAFI 244 K+GG+D+ A + +G + + D Y L+GHKWF S+P +D F+ Sbjct: 184 KQGGSDVRSNLTTATPSRRGSEAAGAPSGVGAATPTGADDEYLLTGHKWFCSAPQADVFL 243 Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +LAQ + CF+VPR+L DG+ N QRLK+K+GNRSNA+ E+EF T G+ LGD Sbjct: 244 VLAQAPEGLSCFVVPRVLADGNRNAFALQRLKDKLGNRSNASSEVEFHGTVGYRLGDEGT 303 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M LD + S + MR +L EA + R GG+L ++P M+ +AD+AL Sbjct: 304 GVRTIIEMVAATRLDCVLGSAALMRRALVEATWHTSYRSAFGGLLRNKPAMRNVLADLAL 363 Query: 365 DIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AATAL RLA + D A++ E+A A+ RI P+ K+W CK PA++AEA+EC+GG+G Sbjct: 364 ESEAATALGMRLAAAVDAAEAGDEQAKAFRRIALPLAKFWVCKRTPAMVAEALECLGGNG 423 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGSSGKK 482 Y+EE + +RESP NSI GSG LDVL L + +L L Q Sbjct: 424 YVEESGLPLLFRESPLNSIWEGSGTVNALDVLRALRRPESLQAWLLEVGAAQGADPRLDA 483 Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +T + +++S E + AR L ++A A+ L R D+AD F+ +R Sbjct: 484 AVTDVLEALSDVSEAEAGARRLAARMAACLQASLLVRYSPPDVADAFVASRL 535 >gi|296138746|ref|YP_003645989.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296026880|gb|ADG77650.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 549 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 185/518 (35%), Positives = 270/518 (52%), Gaps = 13/518 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + +A LL A+ + + +E+ G S A AN + P L Sbjct: 8 FNQATPLVDYDAAQYPPLLDAVRSAGATDSLEEIHATGRRAGSAEAIAWGEQANAHPPVL 67 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V + PA+H L+ +I GLH + W+ S P AH RAA+ + Sbjct: 68 KTHDRFGNRIDEVTYDPAYHQLMSAAIEQGLHAAPWE-SDSP----HAHLTRAAKFSVWT 122 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 ++AGH S+T A++ AL TP + + P + +R YDP + P K + G+ +TE Sbjct: 123 SVDAGHTCPISMTYAAVPALRHTPELAAQYEPLLAARVYDPVLRVPTTKRGLTAGMSMTE 182 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ A T++ DG Y L+GHKWF S+PMSD F+ LAQ G + C LVPR+L D Sbjct: 183 KQGGSDVRAGTTRAAPQPDGSYLLTGHKWFTSAPMSDMFLTLAQAPGGLSCVLVPRILPD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N QRLK+K+GN SNA+ E+E+ G L+G+ + +M + LD I S Sbjct: 243 GSRNRFHLQRLKDKLGNHSNASSEIEYDGAVGHLVGEEGAGVRTIVEMVNMTRLDCTIGS 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR+ +A H+ R+ G +LIDQP+M+ +AD+A++ AAT ++ LA D A+ Sbjct: 303 AALMRIGTQQAAHHVAHRNAFGAVLIDQPLMRNVLADLAVEAEAATTVAMWLAELTDLAQ 362 Query: 385 S------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + S A RI I+K+ CK P AEA+EC GG+GY+EE + + YRE+P Sbjct: 363 AGATMADGSPAADLRRIALAISKFHVCKRGPIHAAEAIECFGGNGYVEESGMPKLYREAP 422 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKE 496 SI GSGN LDVL + LF L+ G+ + + L+D +S + Sbjct: 423 LLSIWEGSGNVAALDVLRAAGRQPATVAALFGFLDGAAGADERLDAAVIRLKDELSDVDQ 482 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + E ALA A L G AD F R Sbjct: 483 LEYRARRVVEAAALAIQGALLVTRGEQAAADAFCATRL 520 >gi|238892666|ref|YP_002917400.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae NTUH-K2044] gi|238544982|dbj|BAH61333.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 551 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 177/458 (38%), Positives = 256/458 (55%), Gaps = 9/458 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71 + +H + ++F NQP N + SD+ L A++ L +G+ + + + Sbjct: 5 DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ Sbjct: 63 ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Sbjct: 119 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF G+L+GD + Sbjct: 239 TGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L D A+ S + MR + + A+++A +R G L++QP+M++ + +AL + T Sbjct: 299 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A FRLA ++D + + E+A+AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 AFLFRLARAWDR-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 R YRE P NSI GSGN M LDV+ +L K E L Sbjct: 418 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 455 >gi|221202167|ref|ZP_03575202.1| protein AidB [Burkholderia multivorans CGD2M] gi|221208772|ref|ZP_03581771.1| protein AidB [Burkholderia multivorans CGD2] gi|221171404|gb|EEE03852.1| protein AidB [Burkholderia multivorans CGD2] gi|221177961|gb|EEE10373.1| protein AidB [Burkholderia multivorans CGD2M] Length = 550 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 191/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL +L+ G + S LA AN +TP+L Sbjct: 10 NQFDELVDYNPFATDIALRDALARAGADWAVPQLDAYGARLGSADTARLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + + G R D+VEFHPAWHALL ++G S+ R R+ AA YL Sbjct: 70 NVFDRRGRRIDRVEFHPAWHALLGLYRNEGF-VSLAFRD----TRRGRWAATAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + + K++S +YD + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATPAGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LGD + DM L+ Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELDDAWGIMLGDEGRGIPTIIDMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA L+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FEHDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDVL + + + LF+ L + LG+ ++ + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFAELSE-LGAGEPQIRAALDALRAMLAAPAD 482 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR +++AL + A L R ++D F+ R ++ + G F+ H I Sbjct: 483 TLEASARLFAQRLALTAQACLLRRDAPAAVSDAFIATRL---GEASWGRVAGAFD-PHAI 538 Query: 556 D 556 D Sbjct: 539 D 539 >gi|330003382|ref|ZP_08304597.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3] gi|328536992|gb|EGF63284.1| acyl-CoA dehydrogenase protein [Klebsiella sp. MS 92-3] Length = 550 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 177/458 (38%), Positives = 256/458 (55%), Gaps = 9/458 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71 + +H + ++F NQP N + SD+ L A++ L +G+ + + + Sbjct: 4 DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ Sbjct: 62 ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF + G+L+GD + Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGDEGDGVRQIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L D A+ S + MR + + A+++A +R G L++QP+M++ + +AL + T Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A FRLA ++D + E+A+AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 AFLFRLARAWDR-RDDVRESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 R YRE P NSI GSGN M LDV+ +L K E L Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454 >gi|209963362|ref|YP_002296277.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW] gi|209956828|gb|ACI97464.1| Acyl-CoA dehydrogenase [Rhodospirillum centenum SW] Length = 540 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 196/531 (36%), Positives = 277/531 (52%), Gaps = 25/531 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ--ELARMANYNTP 82 NQPP G+N +S D+ LV + VH E L + TA+ + AN P Sbjct: 16 FNQPPPLEGLNLFSGDTALVEAVRKAGGGVH-EARLAALGARAGTAEVIDWGVEANRRIP 74 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L ++ G R D+V FHPA+H L+R + G WD S H AA LYL Sbjct: 75 ELDSFDRYGRRIDEVRFHPAYHELMRFGLDSGFAAIAWDGS------PAGHVGHAAILYL 128 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q ++G + ++T A++ AL P V +W P+I + YDP + +K V IG+ + Sbjct: 129 SGQADSGTICPMTMTYAAVPALRVEPAVAAEWVPRILAGRYDPAVRPAGEKAGVTIGMAM 188 Query: 203 TEKRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 TEK+GG+D+ A T++ +G Y L+GHKWF S+PM DAF+ LA EG + CFLVPR Sbjct: 189 TEKQGGSDVRANTTRAVPTGQEGWYSLTGHKWFCSAPMCDAFLTLAYAEGGLTCFLVPRW 248 Query: 262 LEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 L DG N G RLK+K+G+RSNA+ E+E+ +G + M LD Sbjct: 249 LPDGERNPGFRVMRLKDKLGDRSNASSEIEYHGALARRVGPEGRGVATIIQMVQHTRLDC 308 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + S MR ++A+A+ + R L+DQP M +AD+A++ AATAL FRLA +F Sbjct: 309 VVGSAQIMRGAVAQALWHTANRSAFQRRLVDQPAMAAVLADLAVETEAATALGFRLARAF 368 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D E AR++ P+ KYW CK P V+ EAMEC+GG+GYIE + R +R+SP N Sbjct: 369 DA------EDPVARLLTPVAKYWVCKRTPGVVYEAMECLGGAGYIETGPMGRLFRQSPLN 422 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500 +I GSGN + LDVL + + L L G + I I L + + Sbjct: 423 AIWEGSGNVIALDVLRAMAREPESAAALKDYLTAQAGRNPDYDDWIA--GIDLRRVTEAT 480 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA 551 AR L E++ALA+ AA L N +AD F R ++G F+A Sbjct: 481 ARMLVERLALAAQAAVLLEWD-NPLADTFCSLRL-----RARGAMYGAFDA 525 >gi|206580739|ref|YP_002240862.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342] gi|206569797|gb|ACI11573.1| acyl-CoA dehydrogenase family protein [Klebsiella pneumoniae 342] Length = 545 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 177/456 (38%), Positives = 256/456 (56%), Gaps = 9/456 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD+ L A++ L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ A Sbjct: 59 GRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWLED----AREGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Q Sbjct: 115 VARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 235 LSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L D A+ S + MR + + A+++A +R G L+DQP+M++ + +AL + TA Sbjct: 295 GGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAF 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D + + E+A+AR+ P K+ CK +AEAME +GG GY EE + R Sbjct: 355 LFRLARAWDR-REDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 YRE P NSI GSGN M LDV+ +L K E L Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 449 >gi|291619081|ref|YP_003521823.1| AidB [Pantoea ananatis LMG 20103] gi|291154111|gb|ADD78695.1| AidB [Pantoea ananatis LMG 20103] Length = 542 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 190/518 (36%), Positives = 283/518 (54%), Gaps = 12/518 (2%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L AL + L +G + S + EL R+AN + P+ Sbjct: 9 FNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANASPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH Y G R D V FHPAWH L++ LH + S++P V+ A RAAR L Sbjct: 69 LHRYDARGVRLDDVRFHPAWHVLMQGLCASRLH----NLSWQPDVQPNASVARAARFILH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T A++ L P + W + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ T++ + + S Y + GHKWF S P SDA ++LAQ + + CF + Sbjct: 185 TEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PRLL DGS N + +RLK+K+GNRSNA+ E+EF G+LLG+ + M + L Sbjct: 245 PRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFREATGWLLGEEGEGVRLILKMAGMTRL 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR + + A+++A +R V G L+DQP+M++ +A AL + TAL RLA Sbjct: 305 DCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLLRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ + + EAA+AR+ P KY CK IAEAME +GG GY E+ + R YR+ P Sbjct: 365 AW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLYRDIP 423 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 NSI GSGN M LDVL ++ + + + L + G + + + ++ L K D+ Sbjct: 424 VNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLSKMDE 483 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 AR LT+++ ++AA L + +AD + +++LD Sbjct: 484 SQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLD 520 >gi|121592516|ref|YP_984412.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120604596|gb|ABM40336.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 551 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 182/501 (36%), Positives = 274/501 (54%), Gaps = 30/501 (5%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 LA AN +TPQL + G+R D +EFHPAWH L+ +GL R F+ R Sbjct: 58 LAEQANRHTPQLQRFDTRGQRIDALEFHPAWHQLMALYRGEGLI----SRPFQDE-RPGR 112 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 AA YL Q+E G L ++T A++ L P + + +++S YDP + Sbjct: 113 WSAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTAYDPRDLPVAD 172 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248 K S+ +G+G+TEK+GG+D+ A T+ I G Y L GHKWF S+P DA +++A+ Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVATPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVAR 232 Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G L+G+ Sbjct: 233 TGEGGPFACFYVPRWRLDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGI 292 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + +M L+ + S + +R + +AIHYARRRH G L +QP+M+ +AD+AL+ Sbjct: 293 PTIIEMASYTRLNCVVGSAAILRQATVQAIHYARRRHAFGKALAEQPLMRAVLADLALES 352 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+ RLA ++ E S + A+ R+M P K+W CK A + EAME +GG+GY+E Sbjct: 353 EAALHLAMRLAQAY-EHDSTPAQRAWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVE 411 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSG 480 + +AR +RE+P NSI GSGN M LDVL L++ L + L E + ++ Sbjct: 412 DGVMARLFREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAA 471 Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 +++ +L + ++ +GL R LT+++ L + A L + +AD F+ R D+ Sbjct: 472 RELQALL---ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADS--- 525 Query: 541 THCMLHGRFNAAHIIDSLYLD 561 G A ID+ LD Sbjct: 526 ------GAGRVAGAIDTRGLD 540 >gi|324112216|gb|EGC06194.1| acyl-CoA dehydrogenase domain-containing protein [Escherichia fergusonii B253] Length = 541 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 184/519 (35%), Positives = 281/519 (54%), Gaps = 9/519 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SDS L + + EL +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN P+L Y G R D V FHPAWH L++ + +H W+ R + Sbjct: 59 GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR + AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF +PR L DG N + +RLK+K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 235 LSCFFLPRFLPDGQRNAIHLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +R V G LI+QP+M+ + +AL + T+L Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ +EA + R+ P K+ CK +AEAME +GG GY E+ + R Sbjct: 355 LFRLARAWDR-RTDEKEALWTRLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L Q G + + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQNRHFDRAVRRFQQL 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 L K + R +T ++ + A + R IA+ + + Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAENWCQ 512 >gi|300692874|ref|YP_003753869.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07] gi|299079934|emb|CBJ52611.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum PSI07] Length = 557 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 191/548 (34%), Positives = 292/548 (53%), Gaps = 29/548 (5%) Query: 18 PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75 P+D+ NQ P N ++SD+ L + H + L GE + + A Sbjct: 2 PADATHRVFNQVPDLAHFNPFTSDTTLQGALDRLGGGWHADALRAFGEMLGTPRTLAWAA 61 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 AN P+LH + GER D+V F PAWHALL GL + EP R A Sbjct: 62 EANQYPPELHTHTRTGERIDRVRFDPAWHALLGLIRSQGLQALPFA---EP--RAGAWAA 116 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 R A ++ AQ+E+G L ++T AS+ L + D AP++++RE+D + QK++ Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASISVLRKETPLFADLAPRLYAREHDARDLPWRQKSA 176 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247 + IG+G+TEK+GG+D+ + T+ + + L+GHKWF S+PM DA +++A Sbjct: 177 ILIGMGMTEKQGGSDVRSNTTVAVPLGGQDGGEGRGATHALTGHKWFFSAPMCDAHLVVA 236 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 ++ +G + CF VPR +DGS N + QRLK+K+GNRSNA+ E+EF G L+G+ Sbjct: 237 RMGAEDGPLSCFFVPRFRDDGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGR 296 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL Sbjct: 297 GIPTIIEMATHTRLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AAT L L ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484 +EE +AR YRE+P NSI GSGN M LDVL + + + +L + D + G + + Sbjct: 417 VEESPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRTPDDALRLMQDI--DARAQGHRTV 474 Query: 485 TILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCH 539 ++ G AR + + +AL + AA + D A+ F+ +RF H Sbjct: 475 RAELAALQALLHQSGDIQETSARRVAQGLALTAQAALMLAHAHADDAERFIASRF----H 530 Query: 540 STHCMLHG 547 H + G Sbjct: 531 HQHGRVFG 538 >gi|83745987|ref|ZP_00943043.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|207741993|ref|YP_002258385.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83727381|gb|EAP74503.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|206593379|emb|CAQ60306.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 553 Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 190/538 (35%), Positives = 288/538 (53%), Gaps = 28/538 (5%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N ++SD+ L + H + L GE + + A AN P+ Sbjct: 10 FNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANRYLPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D V F PAWHALL +GL + + R A +R A ++ Sbjct: 70 LHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D AP++++RE+D + QKT++ IG+G+T Sbjct: 125 AQIESGSLCPATMTFASIPVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y L+GHKWF SSPM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSSPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR + GS N + QRLK+K+GN SNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNCSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMAL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY+EE +AR YRE Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494 +P NSI GSGN M LDVL + + + +L QD+G + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480 Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 G AR + + +AL + AA + D A+ F+ +RF H H + G Sbjct: 481 LHQSGDIQEAAARRIAQGLALTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534 >gi|207727600|ref|YP_002255994.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206590839|emb|CAQ56451.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 553 Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 189/538 (35%), Positives = 287/538 (53%), Gaps = 28/538 (5%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N ++SD+ L + H + L GE + + A AN P+ Sbjct: 10 FNQVPDLAQFNPFTSDTTLQGALDRLGGGWHADALRAFGETLGAPRTLAWAAEANRYPPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D V F PAWHALL +GL + + R A +R A ++ Sbjct: 70 LHTHTRTGERIDSVRFDPAWHALLGLMRSEGLQALPFAQP-----RAGAWAVRTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D AP++++RE+D + QKT++ IG+G+T Sbjct: 125 AQIESGSLCPATMTFASISVLQKETALFTDLAPRLYAREHDARDLPWRQKTAILIGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y L+GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVAVPLRGEGRGATYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR + GS N + QRLK+K+GNRSNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRWRDGGSKNPVQIQRLKDKLGNRSNASSEVEFRGAEGILIGEAGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMAL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY+EE +AR YRE Sbjct: 365 GSAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGYVEESPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494 +P NSI GSGN M LDVL + + + +L QD+G + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIGRAPDDALRLM----QDIGERARGHRAVRAELAALQAL 480 Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 G AR + + L + AA + D A+ F+ +RF H H + G Sbjct: 481 LHQSGDIQEAAARRGAQGLVLTAQAALMLAHAHADDAERFIASRF----HHQHGRVFG 534 >gi|325499722|gb|EGC97581.1| isovaleryl CoA dehydrogenase [Escherichia fergusonii ECD227] Length = 541 Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 184/515 (35%), Positives = 278/515 (53%), Gaps = 9/515 (1%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SDS L + + EL +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPAPLNNSNLYLSDSALCEAVNREGAAWDNELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN P+L Y G R D V FHPAWH L++ + +H W+ R + Sbjct: 59 GRLANIYPPELLRYDAQGRRLDDVRFHPAWHLLMQGLCANRVHNLAWEED----ARVGSF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR + AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFIIHAQVEAGTLCPITMTFAATPLLLELLPAPFQDWKTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T+Q +++ DG Y L GHKWF S P SDA ++LAQ +G Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTQAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTKGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF +PR L DG N + +RLK+K+GNRSNA+ E+EF + G+L+G+ + M Sbjct: 235 LSCFFLPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLVGNEGEGVRYILKM 294 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + D A+ S + MR + + AI++A +R V G LI+QP+M+ + +AL + T+L Sbjct: 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRQVFGKPLIEQPLMRNVLCRMALQLEGQTSL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FRLA ++D ++ +E +AR+ P K+ CK +AEAME +GG GY E+ + R Sbjct: 355 LFRLARAWDR-RTDEKEVLWARLFTPAAKFAVCKAGMPFVAEAMEVLGGIGYCEDSELPR 413 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 YRE P NSI GSGN M LDVL +L K +++ L Q G + R Sbjct: 414 LYREMPVNSIWEGSGNIMCLDVLRVLSKQPGVYDLLTDAFAQVKGQDRHFDRAVRRFQQL 473 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527 L K + R +T ++ + A + R IA+ Sbjct: 474 LRKPSEEQGREITLQLFILGCGAQMLRHASPPIAE 508 >gi|156932415|ref|YP_001436331.1| isovaleryl CoA dehydrogenase [Cronobacter sakazakii ATCC BAA-894] gi|156530669|gb|ABU75495.1| hypothetical protein ESA_00194 [Cronobacter sakazakii ATCC BAA-894] Length = 544 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 189/521 (36%), Positives = 280/521 (53%), Gaps = 13/521 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD+ L + + EL +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPVALNNSNLYLSDTALREAVLREGAGWDAELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y GER D V FHPAWH L++ + +H W + R+ A Sbjct: 59 GRLANANPPELLRYDARGERLDDVRFHPAWHLLMQGLFANRVHNLPWLET----AREGAL 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P + DW + S YD Q Sbjct: 115 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWQTPLASDRYDSHLLPGAQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248 K + IG+G+TEK+GG+D+ + T++ + ++ Y L GHKWF S P SDA ++LAQ Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGPGEAYRLVGHKWFFSVPQSDAHLVLAQ 234 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + CF VPR L DG N + +RLK+K+GNRSNA+ E EF + G+LLG+ Sbjct: 235 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 294 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M + D A+ S MR +LA A+++ +R G LIDQP+M++ + +AL++ Sbjct: 295 ILRMGGMTRFDCALGSHGLMRRALAVALYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 354 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 TAL FRLA ++++ +S E A+AR+ P KY CK +AEAME +GG GY EE Sbjct: 355 QTALLFRLARAWEQRES-PHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 413 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488 + R YRE P NSI GSGN M LDVL +L + + E L + G + Sbjct: 414 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSHEFDAVKGQDRHFDRAWRQ 473 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 + L + D+ R +T ++ L +S A + R+ +A + Sbjct: 474 LAGQLRRPDEAAGRAITTQLFLLASGAQVLRSLTPPLAQAW 514 >gi|283786860|ref|YP_003366725.1| acyl CoA dehydrogenase [Citrobacter rodentium ICC168] gi|282950314|emb|CBG89961.1| probable acyl CoA dehydrogenase [Citrobacter rodentium ICC168] Length = 542 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 188/523 (35%), Positives = 277/523 (52%), Gaps = 15/523 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD L +A + EL +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPLPLNNSNLFLSDGALREAVAREGAGWDSELLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+ N P+L Y P G+R D V FHPAWH L++ + +H W E R + Sbjct: 59 GRLVNAWPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCTNRVHNLPW----EEEARAGSF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P +W + S YD Q Sbjct: 115 VARAARFILHAQVEAGTLCPITMTFAATPLLQQMLPAPFSEWLTPLMSDRYDSHLMPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ + R Sbjct: 175 KRGLLIGMGMTEKQGGSDVLSNTTRAERLEDGTYRLVGHKWFFSVPQSDAHLVLAQAQAR 234 Query: 253 VG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + Sbjct: 235 GGLSCFFVPRFLPDGRRNAVRLERLKDKLGNRSNASCEVEFDDAIGWLLGEEGEGIRHIL 294 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S MR + + AI++A +R V G LIDQP+M++ ++ +AL + T Sbjct: 295 KMGGMTRFDCALGSHGLMRRAFSVAIYHAHQRQVFGKALIDQPMMRQLLSRMALQLEGQT 354 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D + ++E AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 355 ALLFRLARAWDR-RGEAKEQLLARLFTPAAKFAVCKSGIPFVAEAMEVLGGIGYCEESEL 413 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILR 488 R YRE P NSI GSGN M LD+L +L K E L + G + + L+ Sbjct: 414 PRLYREMPVNSIWEGSGNVMCLDILRVLSKHAGAEEMLIGMFSEVRGQDRHFDRAVRQLQ 473 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 + E++G R + I L A + R +A + + Sbjct: 474 QRLRNPVEEQG--RDIARLIYLLGCGARMLRHASPPVAQAWCQ 514 >gi|187930703|ref|YP_001901190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|187727593|gb|ACD28758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] Length = 553 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 186/542 (34%), Positives = 287/542 (52%), Gaps = 28/542 (5%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P G N ++SD+ L + + L+ G+ + + + A AN P+ Sbjct: 10 FNQVPDLTGFNPFTSDATLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANSYHPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D + F PAWHALL GL + +P R A R A ++ Sbjct: 70 LHTHSRTGERIDAIRFDPAWHALLGLMRSQGLQALPFA---DP--RPGAWAARTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D P++++RE+D + QKT++ +G+G+T Sbjct: 125 AQIESGTLCPATMTFASIPVLQNETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y ++GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 N+F+ A AA+ RI+ P K+W CK EAME GG+GY+EE +AR YRE Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTVEATGEAMEVWGGNGYVEEGPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494 +P NSI GSGN M LDVL + + + +L D+G + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLV----HDIGERAHGHRAVRAELAALQAM 480 Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 G AR + + +AL + AA + D A+ F+ +RF H H + G Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF----HHQHGRVFGTL 536 Query: 550 NA 551 + Sbjct: 537 DG 538 >gi|152973052|ref|YP_001338198.1| isovaleryl CoA dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957901|gb|ABR79931.1| putative acyl coenzyme A dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 550 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 176/458 (38%), Positives = 255/458 (55%), Gaps = 9/458 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71 + +H + ++F NQP N + SD+ L A++ L +G+ + + + Sbjct: 4 DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ Sbjct: 62 ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF G+L+GD + Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L D A+ S + MR + + +++A +R G L++QP+M++ + +AL + T Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVVLYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A FRLA ++D + + E+A+AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 AFLFRLARAWDH-RDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 R YRE P NSI GSGN M LDV+ +L K E L Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454 >gi|327395413|dbj|BAK12835.1| protein AidB [Pantoea ananatis AJ13355] Length = 542 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 189/518 (36%), Positives = 284/518 (54%), Gaps = 12/518 (2%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L AL + L +G + S + EL R+AN + P+ Sbjct: 9 FNQPFPLSHSNLFLSDVPLCDALQREGGGWDSEWLASVGRQLGSAESLELGRLANASPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH Y G R D V FHPAWH L++ LH + S++P V+ A RAAR L Sbjct: 69 LHRYDARGVRLDDVRFHPAWHVLMQGLCASRLH----NLSWQPDVQPNASVARAARFILH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T A++ L P + W + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQRYLPARFESWLEPLLSDRYDTHAVPGDQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ T++ + + S Y + GHKWF S P SDA ++LAQ + + CF + Sbjct: 185 TEKQGGSDVLTNTTRAEPLDRRGSGEAYRIVGHKWFFSVPQSDAHVILAQTQQGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PRLL DGS N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + + + L Sbjct: 245 PRLLPDGSRNAIVIERLKDKLGNRSNASSEVEFRDATGWLLGEEGEGVRLILKIAGMTRL 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR + + A+++A +R V G L+DQP+M++ +A AL + TAL RLA Sbjct: 305 DCALGSHGQMRRAFSVALYHAHQRQVMGKTLVDQPIMRQVLARQALQLEGQTALLLRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ + + EAA+AR+ P KY CK IAEAME +GG GY E+ + R YR+ P Sbjct: 365 AW-SSPANVHEAAFARLFTPAAKYVICKAGAPFIAEAMEILGGVGYCEDSELPRLYRDIP 423 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 NSI GSGN M LDVL ++ + + + L + G + + + ++ L K D+ Sbjct: 424 VNSIWEGSGNVMCLDVLRVVGRQSGTLDMLRQAFDAVKGCNRHFDRSWRQLALHLSKMDE 483 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 AR LT+++ ++AA L + +AD + +++LD Sbjct: 484 SQARELTDRLLQLATAAQLLKHAEPLVADAWC-SQWLD 520 >gi|262045386|ref|ZP_06018410.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037304|gb|EEW38551.1| acyl-CoA dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 528 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 176/458 (38%), Positives = 255/458 (55%), Gaps = 9/458 (1%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQ 71 + +H + ++F NQP N + SD+ L A++ L +G+ + + + Sbjct: 4 DTMHWQTHTVF--NQPTPLNNSNLFLSDTALREAVVREGAGWDGDLLASIGQQLGTAESL 61 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W R+ Sbjct: 62 ELGRLANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQED----AREG 117 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM-TTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T A+ L P +DW + S YDP Sbjct: 118 AFVARAARFLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPG 177 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K ++G Y L GHKWF S P SDA ++LAQ Sbjct: 178 GQKRGLLIGMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAP 237 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + CF VPRLL DG NG+ +RLK K+GNRSNA+ E+EF G+L+GD + Sbjct: 238 AGLSCFFVPRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYEACGWLVGDEGDGVRQIL 297 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L D A+ S + MR + + A+++A +R G L++QP+M++ + +AL + T Sbjct: 298 RMGGLTRFDCALGSHALMRRAFSVALYHALQRQAFGKNLVEQPMMRQLLGQMALRLEGQT 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A FRLA ++D + + E+ +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 358 AFLFRLARAWDH-RDDARESVWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESEL 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 R YRE P NSI GSGN M LDV+ +L K E L Sbjct: 417 PRLYREMPVNSIWEGSGNIMCLDVMRVLSKQPAAMELL 454 >gi|309780304|ref|ZP_07675055.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|308921007|gb|EFP66653.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 553 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 186/542 (34%), Positives = 287/542 (52%), Gaps = 28/542 (5%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P G N ++SD+ L + + L+ G+ + + + A AN P+ Sbjct: 10 FNQVPDLTGFNPFTSDTTLQGALERLGGGWNAGALQAFGDQLGAPETLQWAAEANTYHPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D + F PAWHALL GL + +P R A R A ++ Sbjct: 70 LHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFA---DP--RAGAWAARTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D P++++RE+D + QKT++ +G+G+T Sbjct: 125 AQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y ++GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVATPLRGEGRGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 N+F+ A AA+ RI+ P K+W CK EAME GG+GY+EE +AR YRE Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITILRDSISLC 494 +P NSI GSGN M LDVL + + + +L D+G + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLV----HDIGERAQGHRAVRAELAALQAM 480 Query: 495 KEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRF 549 G AR + + +AL + AA + D A+ F+ +RF H H + G Sbjct: 481 LHQPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF----HHQHGRVFGTL 536 Query: 550 NA 551 + Sbjct: 537 DG 538 >gi|241664892|ref|YP_002983252.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240866919|gb|ACS64580.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 553 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 181/523 (34%), Positives = 281/523 (53%), Gaps = 20/523 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P G N ++SD+ L + + L+ G+ + + + A AN P+ Sbjct: 10 FNQVPDLTGFNPFTSDTTLQGALERLGGGWNASALQAFGDQLGAPETLQWAAEANTYHPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D + F PAWHALL GL + +P R A R A ++ Sbjct: 70 LHTHSRTGERIDAIRFAPAWHALLGLMRSQGLQALPFA---DP--RAGAWAARTAGYFMQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L + D P++++RE+D + QKT++ +G+G+T Sbjct: 125 AQIESGTLCPATMTFASIPVLQKETALFADLGPRLYAREHDARDLPWRQKTAILVGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ + T+ + Y ++GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRSNTTVATPLRGEARGATYAITGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSNA+ E+EF G L+G+ + +M Sbjct: 245 FVPRFRDDGSKNPIQIQRLKDKLGNRSNASSEVEFRGAEGILIGEEGRGIPTIIEMATHT 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRHALMQALHHARHRMAFGRLLADQPLMRNVLADLALESQAATLLMMEL 364 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 N+F+ A AA+ RI+ P K+W CK EAME GG+GY+EE +AR YRE Sbjct: 365 GNAFERADVDPLAAAWKRIVTPAAKFWVCKRTIEATGEAMEVWGGNGYVEEGPMARLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 +P NSI GSGN M LDVL + + + +L + + + G + + ++ Sbjct: 425 APVNSIWEGSGNVMCLDVLRAIARTPDDALRLVHDIAER--AQGHRAVRAELAALQAMLH 482 Query: 497 DKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 G AR + + +AL + AA + D A+ F+ +RF Sbjct: 483 QPGDIQETSARRIAQGLALTAQAALMLAYAHPDDAERFIASRF 525 >gi|254250963|ref|ZP_04944281.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] gi|124893572|gb|EAY67452.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] Length = 550 Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 187/539 (34%), Positives = 291/539 (53%), Gaps = 20/539 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL +L+ G + S LA AN + P+L Sbjct: 10 NQFDELVDYNLFATDVALREALARAGADWAAPQLDAYGARLGSADTARLADEANRHPPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHPAWH LL ++GL S+ R R+ AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGL-VSLAFRD----TRRGRWAATAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + + K++S +YD + K S G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWEALRDKLYSDDYDARDVPIADKRSTWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + +M L+ Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ R+A++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRVADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDVL + + + LF L + LG+ ++ + LR +++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDSAAALFDELTE-LGAGEPRIRAALDALRAMLAVPAD 482 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHI 554 + AR +++AL + A L R ++D F+ R S+ + G F+ I Sbjct: 483 TLEAAARLFAQRLALVAQACLLRRDAPAAVSDAFIATRL---AESSWGRIAGGFDPQTI 538 >gi|317508795|ref|ZP_07966440.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252904|gb|EFV12329.1| acyl-CoA dehydrogenase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 563 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 188/540 (34%), Positives = 283/540 (52%), Gaps = 23/540 (4%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M Q H NQ P +G + L L E++ LGE S AQ Sbjct: 1 MRQTHT------VFNQVPPLVGWSLADHPVLAETLQRENAHAARAEIQSLGELAGSAEAQ 54 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS-------- 123 + +A + PQL Y G R D+V + P++H L++ ++ GLH + W S Sbjct: 55 QWGDLAEAHPPQLKNYDRYGNRIDEVVYDPSYHQLMKVAVEYGLHGAAWAESGHSPSATE 114 Query: 124 --FEPVVRKQ---AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178 P + AH RAA++ + Q +AGHL S+T A + AL P V PK+ Sbjct: 115 TQHSPSATETQHCAHLARAAKMIVWGQADAGHLCPISMTYAVVPALRANPAVAAAHEPKL 174 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 SR YDP+ + QK + G+ +TEK+GG+D+ A T+ DG Y ++GHKWF S+P Sbjct: 175 ASRVYDPSLRPIAQKAGLIAGMSMTEKQGGSDVRANTTSAVPQPDGSYRITGHKWFTSAP 234 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 MSD ++LAQ G + CF +PR+L DGS N + QRLK+K+GN+SNA+ E+E+ G+L Sbjct: 235 MSDLLLVLAQAPGGLSCFYLPRILPDGSRNNMSVQRLKDKLGNKSNASSEVEYDEAVGWL 294 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +G+ + +M + LD + + + M ++ A A H+A R G L+DQP+M+ Sbjct: 295 VGEEGKGVKTIVEMVNMTRLDCTLATSTAMSLATAHAAHHATYRSAFGANLVDQPLMRNV 354 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A++ A+ + LA D+A + E+A A RI ++KY+ CK P +AEA+E Sbjct: 355 LADLAVEAEASLTTALWLAAHVDKATAGDEQAKALLRISLAVSKYFICKRGPVHVAEALE 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 C+GG+GY EE + R YRE P SI GSGN LD L + K LF+ + G Sbjct: 415 CLGGNGYTEESRMPRFYREVPLLSIWEGSGNVAALDALRAMAKQPESVALLFAEFDAARG 474 Query: 478 SSGK--KVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + + L+D ++ E + AR + +ALA + L R G +AD F +RF Sbjct: 475 ADTRFDSSVAALKDELAGGFEAIEHRARRIVGGLALALQGSLLIRHGHPAVADAFAASRF 534 >gi|83858606|ref|ZP_00952128.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83853429|gb|EAP91281.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 567 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 192/523 (36%), Positives = 285/523 (54%), Gaps = 17/523 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ +G+N Y+ D++L + ++ + VH E L +G V S Q+LARMAN N P+ Sbjct: 33 NQSEPLVGVNWYADDAMLKSALSRNGADVHAERLSSMGAEVGSDGVQDLARMANENPPRF 92 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHPA+HAL+ + G+ + W V + H + AA L LM Sbjct: 93 KPFDRFGHRIDEVEFHPAYHALMELGLGHGVSSAAW------TVEQAPHSLHAALLMLMG 146 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +AG S+T AS+ AL + W + + YDP P +K + +G+ +TE Sbjct: 147 TADAGVCCPQSMTYASVPALRKSDWTGP-WIQGVTAGRYDPRFLPPEEKVGLTLGMAMTE 205 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPR 260 K+GG+D+ A ++ + I L+GHKWF S+PMSD F+ LA + ++ CFLVPR Sbjct: 206 KQGGSDVRANATRAESADGDIVTLTGHKWFCSAPMSDGFLTLAYEGDGDDAQLSCFLVPR 265 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 DG N + QRLK+K+G++SNA+ E+E+ + +G+ + +M LD Sbjct: 266 WTPDGERNTIEIQRLKDKLGDKSNASSEIEYKQAWARRVGEPGRGVRTIIEMVNHTRLDC 325 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 S +R A A+ +A RR LIDQP+M+ +A++A++ AA AL+FR+A SF Sbjct: 326 LAGSAGLIRNGAAYAVWHADRRSAFQRRLIDQPLMREVLAEMAMEAEAALALAFRVAESF 385 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D+A S EAA AR++ PI KYW CK AP + EAME GG+GY+EE + R +R+SP N Sbjct: 386 DKADSDPNEAALARLLTPIAKYWICKRAPYLTYEAMEAHGGAGYVEEHPLPRMFRQSPLN 445 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSISLCKED 497 +I GSGN + LDVL L + E L + L G ++ + R + E Sbjct: 446 AIWEGSGNVIALDVLRALARDEAAREALTAELAPAYGRHPALDARLNALTRMAAGGIGEA 505 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 AR E A A +A+ L RAG++ AD ++ R +N S Sbjct: 506 D--ARRFAEWAATALTASTLIRAGLDPAADAYIGRRIAENPTS 546 >gi|317049747|ref|YP_004117395.1| acyl-CoA dehydrogenase domain-containing protein [Pantoea sp. At-9b] gi|316951364|gb|ADU70839.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. At-9b] Length = 542 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 190/519 (36%), Positives = 279/519 (53%), Gaps = 12/519 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N ++ D L +A + +E L +G + S + EL R+AN P+ Sbjct: 9 FNQPQPLSNSNLFTRDLPLCEAVAREGASWDREWLASVGLQLGSAESLELGRLANAQPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y GER D+V FHPAWH L++ LH + S++P V+ A RAAR L Sbjct: 69 LLRYDARGERLDEVRFHPAWHLLMQGLCASRLH----NLSWQPDVQPNAMVARAARFMLH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T A++ L P + DW + S YD ++ K + IG+G+ Sbjct: 125 AQVEAGSLCPVTMTHAAIPLLQNYLPAPYLDWRDALLSDRYDAHHQPGSNKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GGTD+ + +++ + + Y + GHKWF S P SDA ++LAQ G + CF + Sbjct: 185 TEKQGGTDVLSNSTRAEPLGGRGPGEAYRIVGHKWFFSVPQSDAHLILAQTAGGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PRLL DG+ N + +RLK+K+GNRSNA+ E+EF + G+L+GD + M + Sbjct: 245 PRLLPDGARNAIRLERLKDKLGNRSNASCEVEFQDAIGWLMGDEGDGIRLILKMGGMTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR + + A+H+A++R V G L DQP+M+ +A AL + TAL RLA Sbjct: 305 DCALGSHGLMRRAFSIALHHAQQRQVMGKNLSDQPLMRTVLAQQALQLEGQTALLLRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ S E YAR+ P KY C+ +AEAME +GG GY EE + R YRE P Sbjct: 365 AWSTPVSEHER-LYARLFTPAAKYVICQAGIPFVAEAMEVLGGIGYCEESELPRLYREMP 423 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 NSI GSGN M LDVL +L + ++ L LE G + + + L + Sbjct: 424 VNSIWEGSGNVMCLDVLRVLNRQSDALVMLSDELEAVKGCNRHFDRRWRQLRLRLGNVPE 483 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 G AR +T ++ ++AA L +AD + + +FLD Sbjct: 484 GQARAVTTELLQLATAAILLNVAEPPLADGWCQ-QFLDT 521 >gi|24115540|ref|NP_710050.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str. 301] gi|24054870|gb|AAN45757.1| putative carnitine operon oxidoreductase [Shigella flexneri 2a str. 301] Length = 460 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 171/438 (39%), Positives = 248/438 (56%), Gaps = 9/438 (2%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 5 DTVHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Sbjct: 119 AFVARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPG 178 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ Sbjct: 179 GQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTA 238 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + Sbjct: 239 GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLIL 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + T Sbjct: 299 KMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 358 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL FRLA ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + Sbjct: 359 ALLFRLARAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESEL 417 Query: 431 ARHYRESPANSILLGSGN 448 R YRE P NSI GSG Sbjct: 418 PRLYREMPVNSIWEGSGG 435 >gi|260599467|ref|YP_003212038.1| isovaleryl CoA dehydrogenase [Cronobacter turicensis z3032] gi|260218644|emb|CBA33960.1| Protein aidB [Cronobacter turicensis z3032] Length = 575 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 188/521 (36%), Positives = 280/521 (53%), Gaps = 13/521 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQEL 73 +H + ++F NQP N + SD+ L + + EL +G+ + + + EL Sbjct: 32 MHWQTHTVF--NQPVALNNSNLFLSDTALREAVLREGAAWDAELLASIGQQLGTAESLEL 89 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN + P+L Y GER D V FHPAWH L++ + +H W + R A Sbjct: 90 GRLANAHPPELLRYDARGERLDDVRFHPAWHLLMQGLCANRVHNLPWLET----ARDGAL 145 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T A+ L P + DW + S YD Q Sbjct: 146 VARAARFVLHAQVEAGTLCPITMTFAATPLLQAHLPPLFADWRTPLASDRYDSHLLPGAQ 205 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQ 248 K + IG+G+TEK+GG+D+ + T++ + ++ Y L GHKWF S P SDA ++LAQ Sbjct: 206 KRGLLIGMGMTEKQGGSDVLSNTTRAEPVAGRGAGEAYRLVGHKWFFSVPQSDAHLVLAQ 265 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + CF VPR L DG N + +RLK+K+GNRSNA+ E EF + G+LLG+ Sbjct: 266 TKGGLSCFFVPRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDALGWLLGEEGEGVRQ 325 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M + D A+ S MR +LA AI++ +R G LIDQP+M++ + +AL++ Sbjct: 326 ILRMGGMTRFDCALGSHGLMRRALAVAIYHTHQRQAFGKNLIDQPLMRQVLGRMALELEG 385 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 TAL FRLA ++++ +S E A+AR+ P KY CK +AEAME +GG GY EE Sbjct: 386 HTALLFRLARAWEQRES-PHEVAFARLFTPAAKYGVCKRGIPFVAEAMEALGGIGYCEES 444 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488 + R YRE P NSI GSGN M LDVL +L + + E L + E G + Sbjct: 445 ELPRLYREMPVNSIWEGSGNIMCLDVLRVLTRQPGVLEMLSNEFEAVKGQDRHFDRAWRQ 504 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 + L + D+ R +T ++ L ++ A + R+ +A + Sbjct: 505 LAGQLRRPDEAAGRAITTQLFLLATGAQVLRSLTPPLAQAW 545 >gi|304396946|ref|ZP_07378826.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB] gi|304355742|gb|EFM20109.1| acyl-CoA dehydrogenase domain protein [Pantoea sp. aB] Length = 542 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 186/519 (35%), Positives = 278/519 (53%), Gaps = 12/519 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD+ L ++ + +E L +G + S + EL R+AN P+ Sbjct: 9 FNQPHPLSNSNLFLSDTPLGEALSREGAGWDREWLASVGRQLGSAESLELGRLANAEPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y GER D+V FHPAWH L++ LH + S++P VR+QA RAAR L Sbjct: 69 LLRYDARGERMDEVRFHPAWHLLMQGVCASRLH----NLSWQPTVREQASVARAARFILH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T A++ L T P + W + S YD + QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTHAAIPLLQTYLPAAFEGWLDPLLSDRYDTHAQPGDQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ T+ G + + Y L+GHKWF S P SDA ++LAQ + CF + Sbjct: 185 TEKQGGSDLLTSTTHAEPLGARGAGEAYRLTGHKWFFSVPQSDAHLVLAQTPAGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PRLL DGS N + +RLK+K+GNRSNA+ E+EF + G+LLG+ + M + Sbjct: 245 PRLLPDGSRNAIQLERLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMGGMTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR + + A+ +A +R V G L++QP+M++ +A AL + TAL RLA Sbjct: 305 DCALGSHGQMRRAFSVAVSHAHQRQVMGKNLVEQPLMRQVLAQQALQLEGQTALLMRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ + ++ E +AR+ P KY CK +AE+ME +GG GY E + R YR+ P Sbjct: 365 AWSQ-PAKPHEVTFARLFTPAAKYEICKAGAPFVAESMEVLGGIGYCEASELPRLYRDMP 423 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 NSI GSGN M LDVL + + + L E GS+ + + L + Sbjct: 424 VNSIWEGSGNVMCLDVLRVFARQAEVTAMLSQEFEAVKGSNRHFDTRWRQLRLRLNHVPE 483 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 AR +T + L + A L + +AD + + ++LD Sbjct: 484 EQAREVTRTLLLLAMGAQLLKYAEPPLADAWCQ-QWLDQ 521 >gi|222109323|ref|YP_002551587.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221728767|gb|ACM31587.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 551 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 179/501 (35%), Positives = 274/501 (54%), Gaps = 30/501 (5%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 LA AN +TPQL + G R D +EFHPAWH L+ +GL R F+ R Sbjct: 58 LAEQANRHTPQLQRFDTRGRRIDALEFHPAWHQLMALYRGEGLI----SRPFQDE-RPGR 112 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 AA YL Q+E G L ++T A++ L P + + +++S YDP + Sbjct: 113 WAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYSTVYDPRDLPVAD 172 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248 K S+ +G+G+TEK+GG+D+ A T+ I G Y L GHKWF S+P DA +++A+ Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVAAPIGTGGRGGEYRLRGHKWFFSAPQCDAHLVVAR 232 Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G L+G+ Sbjct: 233 TGEGGPFACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNASSEVEFEDAWGLLMGEEGRGI 292 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + +M L+ + S + +R + +AIHYA RRH G L +QP+M+ +AD+AL+ Sbjct: 293 PTIIEMASYTRLNCVVGSAAILRQATVQAIHYAHRRHAFGKALAEQPLMRAVLADLALES 352 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+ RLA ++++ + ++ A+ R+M P K+W CK A + EAME +GG+GY+E Sbjct: 353 EAALHLAMRLAQAYEDDDAPAQR-AWKRVMTPAAKFWVCKRAVELTGEAMEVLGGNGYVE 411 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL------EQDLGSSG 480 + +AR +RE+P NSI GSGN M LDVL L++ L + L E + ++ Sbjct: 412 DGVMARLFREAPVNSIWEGSGNVMCLDVLRALQREPEAAHALLTELHAAAQGEPRIAAAA 471 Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 +++ +L + ++ +GL R LT+++ L + A L + +AD F+ R D+ Sbjct: 472 RELQALL---ATPAEQLEGLGRVLTQRLVLLAQACLLRQQAPAAVADAFIATRLADS--- 525 Query: 541 THCMLHGRFNAAHIIDSLYLD 561 G A ID+ LD Sbjct: 526 ------GAGRVAGAIDTRGLD 540 >gi|302185136|ref|ZP_07261809.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642] Length = 549 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 176/469 (37%), Positives = 256/469 (54%), Gaps = 19/469 (4%) Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 +AN + P+ ++ G R D VEFHPA+H L+ +I G+ W +P + A Sbjct: 64 LANQHKPEFVSHDRYGHRIDLVEFHPAYHQLMSTAIEHGIPSLPWT---DP--QSGAQVA 118 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 RAA YL Q + G ++T AS+ AL P + + W PK+ S EYDP N K Sbjct: 119 RAAMSYLHTQADPGSGCPLTMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKRG 178 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEG 251 IG+ +TEK+GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + Sbjct: 179 ATIGMAMTEKQGGTDVRANTTRAFSVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDK 238 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + CFL+PR D + N QRLKNK+GN SNA+ E+EF +++G+ + + Sbjct: 239 GLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPAIIE 298 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M + D I S + MR +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA A Sbjct: 299 MVAMTRFDCMIGSSALMRQALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALA 358 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ R+ + D E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + Sbjct: 359 MTLRMGRALDHLDD-DHEKRFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILP 417 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL-----EQDLGSSGKKVITI 486 R YRE+P NS GSGN LDVL L K + LF L ++ L + K+ Sbjct: 418 RLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLAAHIGKLKAA 477 Query: 487 LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL 535 +D+ L + AR LTE IA+A L AG ++D F+ R + Sbjct: 478 FQDTGDL----QYRARQLTEDIAIALQGKLLLEAGNAAVSDGFIAGRLV 522 >gi|221069757|ref|ZP_03545862.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714780|gb|EED70148.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 549 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 183/525 (34%), Positives = 282/525 (53%), Gaps = 26/525 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLG-EYVLSCTAQELARMANYNTPQ 83 NQ P N ++SD +L +A + + EL+ G EY T + A AN+ P+ Sbjct: 8 NQAPELKDYNVFTSDPVLQRAVARGGAQWREPELQRQGAEYGAEATLRA-AEDANHFEPE 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141 LH + P G+R D+V FHPAWH ++ + +G+ C++ P R+ A A L+ Sbjct: 67 LHTHSPTGDRIDQVRFHPAWHQMMTIARRNGI-CNL------PFTDARQTAWPAYGASLF 119 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 + +Q+E+G ++T AS+ + P++H P + S +YD + K S+ +G+G Sbjct: 120 MHSQIESGSGCPTTMTKASIPLVRLNPQLHAVLGPLLASTDYDARDIPAEGKRSITVGMG 179 Query: 202 LTEKRGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252 +TE++GG+D+ + T++ ++ Y ++GHKWF S+PM D ++LA+ E R Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSLGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 CF VPR DG N + QRLK+K+GNRSN++ E+EF N +G L+G + +M Sbjct: 240 PTCFFVPRWRPDGRKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD A+ S MR +L +A+HY R RH G L +QPVM +AD+AL+ AAT L Sbjct: 300 ATYTRLDCALTSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + LA F + A+ RI+ P K+W CK A EAME GG+GY+E + R Sbjct: 360 AMDLAARFGSEDPLDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDS 490 +RE+P NSI GSGN M LDVL + + + L L+Q + + LR + Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHLQQAGAEEAVLRTQVDKLRQA 477 Query: 491 ISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 I L +D + AR T+++A+ A + + +D A FL +RF Sbjct: 478 IMLAPQDLEREARRFTQRLAITVQATLMLQHASSDSAAAFLGSRF 522 >gi|17544840|ref|NP_518242.1| oxidoreductase flavoprotein FAD [Ralstonia solanacearum GMI1000] gi|17427129|emb|CAD13649.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 557 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 193/550 (35%), Positives = 291/550 (52%), Gaps = 33/550 (6%) Query: 18 PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75 P+D+ NQ P N ++SD+ L + H + L GE + S A Sbjct: 2 PADATHRVFNQVPDLAHFNPFTSDATLQGALGRLGGGWHADALRAFGETLGSPRTLAWAA 61 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 AN P+LH + GER D V F PAWHALL GL + EP R A Sbjct: 62 EANRYPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFA---EP--RAGAWAA 116 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 R A ++ AQ+E+G L ++T AS+ L + D AP++++RE+D + QKT+ Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTA 176 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247 + +G+G+TEK+GG+D+ + T+ + Y L+GHKWF S+PM DA +++A Sbjct: 177 ILVGMGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVA 236 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 ++ +G + CF VPR +DG N + QRLK+K+GN SNA+ E+EF G L+G+ Sbjct: 237 RMGAEDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGR 296 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL Sbjct: 297 GIPTILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AAT L L ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKK 482 +EE +AR YRE+P NSI GSGN M LDVL + + + +L QD+G + G + Sbjct: 417 VEEGPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLV----QDIGERARGHR 472 Query: 483 VITILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + ++ G AR + + +AL + AA + D A+ F+ +RF Sbjct: 473 AVRAELAALQAMLHQSGDIQEASARRIAQGLALTAQAALMLAHAHADDAERFIASRF--- 529 Query: 538 CHSTHCMLHG 547 H H + G Sbjct: 530 -HHQHGRVFG 538 >gi|254475449|ref|ZP_05088835.1| acyl-CoA dehydrogenase [Ruegeria sp. R11] gi|214029692|gb|EEB70527.1| acyl-CoA dehydrogenase [Ruegeria sp. R11] Length = 550 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 191/538 (35%), Positives = 281/538 (52%), Gaps = 12/538 (2%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 N PP + +S D +L ++ + +L G+ E A AN + P+L Sbjct: 17 NTPPHLGDQDLWSQDIVLQEGVLREGAAGSVAKLAQFGKDAGRAEVMEQADEANRHAPEL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ G R ++V FHP++HAL ++ +GL W AH AA Y++ Sbjct: 77 QAFDRYGMRINEVRFHPSYHALQDLAVSNGLSNHAWCNPG-----PGAHVTHAALNYMLN 131 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E G + +++ A++ AL TTP V +DW + S+ YD + +KT + +G+ +TE Sbjct: 132 QMEGGVMCPLAMSYAAVPALRTTPDVAEDWVHGLLSQRYDRRDIPASEKTGLQMGMFMTE 191 Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 K+GG+D+ A ++Q + DG Y L+GHK+F S+PMSDAF+ LA G + CFLVPR Sbjct: 192 KQGGSDVRANSTQA--VPDGAGYRLTGHKFFCSAPMSDAFLTLAYAPGGLSCFLVPRFTP 249 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 DG+ N QRLK+K+GNRSNA+ E+E +T+G L+G + DM A Sbjct: 250 DGARNRFYLQRLKDKLGNRSNASSEMELQDTWGTLVGPEGRGVRTIIDMVQGTRFYCAFG 309 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S + MR L +A+H+ R R LIDQP+M+ +AD+AL+ AA LS RL + DEA Sbjct: 310 SAALMRQGLLQAVHHTRHRAAFQRRLIDQPLMQNVLADLALETEAALTLSLRLGRAIDEA 369 Query: 384 KSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ A ARI I K+W CK A AE MEC GG GYIEE + R YRE+P NSI Sbjct: 370 EAGDARAGKLARIGTAIAKFWICKRAIQHAAETMECHGGPGYIEESPMPRLYREAPVNSI 429 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDKGL 500 GSGN + LDVL L K E L G + + + L+ + D Sbjct: 430 WEGSGNVICLDVLRALHKDAETGEVFLKELAPARGGNRDFDQALARLQQDLPSMVADPTS 489 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 AR L+E++A+ A+ L R + ++D F +R L G + ++D + Sbjct: 490 ARHLSEQMAVLWQASLLIRHAPSLVSDAFCSSRLGSRWSGVFGTLRGDAVSRALVDRV 547 >gi|299068312|emb|CBJ39536.1| isovaleryl CoA dehydrogenase [Ralstonia solanacearum CMR15] Length = 557 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 193/550 (35%), Positives = 291/550 (52%), Gaps = 33/550 (6%) Query: 18 PSDSLF-ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELAR 75 P+D+ NQ P N ++SD+ L + H + L GE + + A Sbjct: 2 PADATHRVFNQVPDLAHFNPFTSDATLQGALDRLGGGWHADALRAFGETLGAPQTLAWAA 61 Query: 76 MANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI 135 AN P+LH + GER D V F PAWHALL GL + EP R A Sbjct: 62 EANRYPPELHTHSRTGERIDSVRFDPAWHALLGLMRGQGLQALPFA---EP--RAGAWAA 116 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 R A ++ AQ+E+G L ++T AS+ L + D AP++++RE+D + QKT+ Sbjct: 117 RTAGYFMQAQIESGSLCPATMTFASIPVLQKETALFADLAPRLYAREHDARDLPWRQKTA 176 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISD--------GIYCLSGHKWFLSSPMSDAFIMLA 247 + IG+G+TEK+GG+D+ + T+ + Y L+GHKWF S+PM DA +++A Sbjct: 177 ILIGMGMTEKQGGSDVRSNTTVAVPLGGKDGGEGRGATYALTGHKWFFSAPMCDAHLVVA 236 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 ++ +G + CF VPR +DG N + QRLK+K+GN SNA+ E+EF G L+G+ Sbjct: 237 RMGAEDGPLSCFFVPRWRDDGGKNPVQIQRLKDKLGNCSNASSEVEFRAAQGILIGEAGR 296 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M LD I S + +R +L +A+H+AR R G +L DQP+M+ +AD+AL Sbjct: 297 GIPTILEMATHTRLDCVIGSAALLRHALMQALHHARHRMAFGRLLADQPLMRNVLADLAL 356 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AAT L L ++F+ A++ AA+ RI+ P K+W CK A EAME GG+GY Sbjct: 357 ESQAATLLMMALGDAFERAEADPVAAAWKRIVTPAAKFWVCKRAIEATGEAMEVWGGNGY 416 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKK 482 +EE +AR YRE+P NSI GSGN M LDVL + + + +L QD+G + G + Sbjct: 417 VEEGPMARLYREAPVNSIWEGSGNVMCLDVLRAIGRVPDDALRLV----QDIGERARGHR 472 Query: 483 VITILRDSISLCKEDKG-----LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 + ++ G AR + + +AL + AA + D A+ F+ +RF Sbjct: 473 AVRAELAALQAMLHQSGDIQEASARRIAQGVALTAQAALMLAHAHADDAERFIASRF--- 529 Query: 538 CHSTHCMLHG 547 H H + G Sbjct: 530 -HHQHGRVFG 538 >gi|330960139|gb|EGH60399.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 549 Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 185/514 (35%), Positives = 266/514 (51%), Gaps = 11/514 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP +N Y D L F + K + E +AN + P Sbjct: 14 NQPPPLGEVNLYRIDMPLQEWSQRFGAGWAKSRIDAYGALAGGPLMEAGFLANRHKPVFA 73 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 ++ G R D VEFHPA+H L+ +I G+ W +P + AH RAA YL Q Sbjct: 74 SHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWT---DP--QPGAHVARAAMSYLHTQ 128 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 E G ++T AS+ AL P + + W PK+ S YDP N KT +G+ +TEK Sbjct: 129 AEPGTGCPLTMTFASVPALRLQPDLAEIWLPKVLSTRYDPRNIGIAHKTGATLGMAMTEK 188 Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 +GGTD+ A T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+ R Sbjct: 189 QGGTDVRANTTRAFAVGAGGPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLARH 248 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 + + N QRLK+K+GN SNA+ E+EF +++G+ + +M + D Sbjct: 249 RPNDTRNEFYIQRLKDKLGNASNASSEVEFRGALAWMIGEEGRGVPTILEMVAMTRFDCM 308 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 I S + MR +L +A+H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + D Sbjct: 309 IGSSALMRQALTQAVHHCAHRCVSGRVLTEQPLMQNVLADLALESEAALALTLRMGRALD 368 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 E R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P NS Sbjct: 369 HLHD-DHEKRLVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNS 427 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGL 500 GSGN LDVL L K + LF L G+ I L+ + ++ + Sbjct: 428 TWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGNRHLAAHINNLKAAFQDTRDIQYR 487 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 488 ARQLTEDIAVALQGKLLLEAGNAAVSDGFIAGRI 521 >gi|163856266|ref|YP_001630564.1| putative acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163259994|emb|CAP42295.1| putative acyl-CoA dehydrogenase [Bordetella petrii] Length = 555 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 179/478 (37%), Positives = 253/478 (52%), Gaps = 23/478 (4%) Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 A AN +P+ H Y G R D++EFH AWHALL + GLH W R A Sbjct: 60 AEQANRCSPRWHGYDRNGHRVDQIEFHAAWHALLAGIVSRGLHSHAWLRPA-----PGAQ 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPR----VHKDWAPKIFSREYDPTNKA 189 RAA + Q+EAG L ++T A++ L P + W P + SR+YD + Sbjct: 115 VARAAAYLMQGQIEAGTLCPTTMTYAAVPLLQAEPAGVIDFGRQWLPALASRDYDSADAP 174 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIM 245 K IG+GLTEK+GG+D+ AI ++ + + G Y L+GHKWFLS P +DA ++ Sbjct: 175 LAAKRGALIGMGLTEKQGGSDLRAIATRAEPVGQGGRGAAYLLTGHKWFLSVPHADAHLV 234 Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 LA + GCF VPR DG N + +RLK+K+GNRSNA+ E+EF +G L+G+ Sbjct: 235 LANTDAGPGCFFVPRWTPDGPRNAVRIRRLKDKLGNRSNASGEVEFEQAWGMLMGEPGRG 294 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + M LD + S + +R ++ +A H+A+ R G L QP+M++ +AD+AL+ Sbjct: 295 LPLLLQMAATTRLDCVLGSAALLRQAVVQAAHHAQHRQAFGRALASQPLMRQVLADLALE 354 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA A + RLA + DE R + AA A R+ P K W CK A A IAE ME GG+G Sbjct: 355 SEAAMAWALRLARAVDE---RHQPAARALVRVGTPAAKLWVCKRAIAAIAECMEVWGGNG 411 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS----- 478 Y+EE + R YRE+P NSI GSG+ M LDVL L++ + + L L+ G+ Sbjct: 412 YVEESPLPRLYREAPVNSIWEGSGSIMALDVLRALQRDPDCLQALHDELDPARGAWPAYD 471 Query: 479 SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 + L + + D AR L +A AA L R +AD F+ +R D Sbjct: 472 QAWQAWRELAARQAGSEADPAQARRLAAGLARLWQAALLIRHAPAAVADAFVASRLAD 529 >gi|113866265|ref|YP_724754.1| Acyl-CoA dehydrogenase, short-chain specific ( AidB protein) [Ralstonia eutropha H16] gi|113525041|emb|CAJ91386.1| Acyl-CoA dehydrogenase, short-chain specific (probable AidB protein) [Ralstonia eutropha H16] Length = 587 Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 177/524 (33%), Positives = 278/524 (53%), Gaps = 22/524 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N +++D L + H L G + Q+ A AN +TP+ Sbjct: 44 FNQVPDLAHYNLFATDPALRGALERLGGGWHAGTLGQFGARLGEPEVQQWAADANRHTPE 103 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D V+FHP+WHALL L + + R A R A +L Sbjct: 104 LHTHSRTGERIDAVDFHPSWHALLALLRSQQLQALPFAQP-----RAGAWVARTAGYFLQ 158 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L P++T AS+ L + + P++++ E+D + K+++ IG+G+T Sbjct: 159 AQVESGSLCPPTMTFASIPVLRKETALFAELEPRLYATEHDARDLPWRSKSAIMIGMGMT 218 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ A T+ + + Y L+GHKWF S+PM DA +++A++ +G + CF Sbjct: 219 EKQGGSDVRANTTVARAVRGEGRGAEYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 278 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSN++ E+EF + G L+G+ + +M Sbjct: 279 FVPRFRDDGSKNAVLIQRLKDKLGNRSNSSSEVEFRDATGILIGEEGRGIPTIIEMATST 338 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R + +A+H+AR R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 339 RLDCVIGSAAILRAAFVQALHHARHRSAFGRLLADQPLMRNVLADLALESEAATLLMMEL 398 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++F+ A A++ R++ P K+W CK EAME GG+GY+EE +AR YRE Sbjct: 399 GHAFEHADDDPLAASWKRVVTPAAKFWVCKRTLEATGEAMEVWGGNGYVEEGPMARLYRE 458 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG------KKVITILRDS 490 +P NSI GSGN M LDVL +++ + +L L + G + +LR Sbjct: 459 APVNSIWEGSGNIMCLDVLRAIQRNPDDAARLLQDLSRRAGGHPAVRAELASLQALLRQP 518 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L + AR + + L + AA + + A++F+ +R Sbjct: 519 PELLEAS---ARRFAQGLVLTAQAALMLAHADTENAELFVASRL 559 >gi|194366730|ref|YP_002029340.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194349534|gb|ACF52657.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 545 Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 170/459 (37%), Positives = 255/459 (55%), Gaps = 14/459 (3%) Query: 18 PSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 P ++ LNQPP F G ++ D +L+ A+ L + G + EL R+ Sbjct: 11 PFETHVVLNQPPPFAGRQLWTDDVALMEAVQREGAGSFAPRLAVYG----ALAGDELYRL 66 Query: 77 ---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 AN + P+L + G R D VEFHPA+H L+ + G+ W EP + AH Sbjct: 67 GFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKSHGVAGLSW---HEP--QPGAH 121 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RAA YL Q EAG ++T A++ L + P + +WA K + YDP + K Sbjct: 122 VARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPRDVPATDK 180 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253 + +G+G+TEK+GG+D+ A +++ + I Y L GHKWF S+PM D F++LAQ G + Sbjct: 181 AGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGL 240 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 C L+PR L DG N RLK+K+G+ +NA+ E+EF + +G+ + M Sbjct: 241 TCLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMV 300 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 ++ LD + + + MR++L++A+H+AR R G +L++ P+M +AD+AL+ AAT LS Sbjct: 301 MMTRLDCMLGAAAEMRMALSQALHHARHRRTFGKLLVEHPLMANVLADLALESEAATVLS 360 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R+A + D A + EAA AR+ + KYW CK A + EA EC+GG+GY+EE + R Sbjct: 361 MRIARAVDRAGVDANEAALARVGTALGKYWVCKRAAGFVNEAQECLGGAGYVEESMLPRL 420 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 YR++P NSI GSGN LDVL L + E L + L Sbjct: 421 YRQAPLNSIWEGSGNIQCLDVLRALAREPEALEALRTEL 459 >gi|94309106|ref|YP_582316.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93352958|gb|ABF07047.1| isovaleryl CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 561 Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 185/524 (35%), Positives = 279/524 (53%), Gaps = 22/524 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N + SD L A + H + L G + Q A AN TP+ Sbjct: 18 FNQVPDLAHYNLFESDPGLRAALDRLGGAWHADTLAAFGARLGDPEVQAWAADANRFTPE 77 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D+VEFHP+WH LL L + + R R +L Sbjct: 78 LHTHSRTGERIDQVEFHPSWHNLLALLRSQQLQAMPFAQP-----RPGVWAARTVGYFLQ 132 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L ++T AS+ L P + D P++++ E+D + KT+V IG+G+T Sbjct: 133 AQVESGSLCPTTMTLASIPVLRKEPALFCDLEPRLYATEHDARDLPWRGKTAVMIGMGMT 192 Query: 204 EKRGGTDIAAITSQGQKI-SDGI---YCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ A T+ + DG Y L+GHKWF S+PM DA +++A++ +G + CF Sbjct: 193 EKQGGSDVRANTTVALPVRGDGRGAEYALTGHKWFFSAPMCDAHLVVARMGAADGPLSCF 252 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSN++ E+EF T G L+G+ + +M Sbjct: 253 FVPRFRDDGSKNPILIQRLKDKLGNRSNSSSEVEFRGTTGILIGEEGRGIPTIIEMATNT 312 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R L +A+H+AR R G +L DQP+M+ +AD+ L+ AAT + L Sbjct: 313 RLDCVIGSAALLRAGLVQALHHARHRMAFGRLLADQPLMRNVLADLTLESEAATLMMMAL 372 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++F+ A AA+ R+M P K+W CK A E ME GG+GY+E+ +AR YRE Sbjct: 373 AHAFEHADDDPLAAAWKRVMTPAAKFWICKRALEATGETMEVWGGNGYVEDGPMARLYRE 432 Query: 437 SPANSILLGSGNAMVLDVLNLLEK----GTNLFEQL--FSTLEQDLGSSGKKVITILRDS 490 +P NSI GSGN M LDVL L++ G + + L S + + + + +LR Sbjct: 433 APVNSIWEGSGNIMCLDVLRALQRDPGDGARILQDLARLSNGDAAVRAELASLQAMLRGP 492 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + AR + + L + AA + G + A +F+ +R Sbjct: 493 ---AEQLETSARRFAQGLVLTAQAALMIAHGNAESAALFVASRL 533 >gi|284046722|ref|YP_003397062.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283950943|gb|ADB53687.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 550 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 188/524 (35%), Positives = 281/524 (53%), Gaps = 20/524 (3%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G++ ++++ LV AL + ++GE + A AN N P+L Sbjct: 17 NQPPPLEGIDLFTTNRPLVEALEREGGGWARADAVMVGE-IAGGDAIRWGFEANENPPRL 75 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+VEFHP+WH L++ S+ +H W R AH R A + Sbjct: 76 KTHDRFGNRVDQVEFHPSWHRLMQTSVEHAIHALPWREE-----RAGAHAARTALSLTFS 130 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAGH ++T A++ AL P + W ++ S YD + +KT G+G+TE Sbjct: 131 QVEAGHGCPITMTFAAVPALRAQPELLDVWEERLTSARYDSRDVPAAEKTGALCGMGMTE 190 Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVP 259 K+GG+D+ A T+ + + G Y L+GHKWF S+PM D F++LAQ+EG V CF VP Sbjct: 191 KQGGSDVRANTTVARAVGGGGPGGEYALTGHKWFCSAPMCDLFLVLAQIEGEGVSCFAVP 250 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N QRLK+K+GNRSNA+ E+EF+ +G L+G+ + +M LD Sbjct: 251 RWRPDGTRNAFHLQRLKDKLGNRSNASSEVEFAGAYGQLVGEPGRGVATIIEMVNHTRLD 310 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 I S +GMR + A A H+A R G +LI+QP+M +AD+ ++ AAT + RLA + Sbjct: 311 CVIGSAAGMRWATALATHHAAHRSAFGRLLIEQPLMANVLADLCVESEAATIAAMRLARA 370 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +DE ++ + RI + KYW CK AEA+E +GG+GY+EE + R YRE+P Sbjct: 371 YDE-----QDHPFKRIATAVMKYWVCKRNAQHAAEAIEVLGGNGYVEESGMPRLYREAPL 425 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKED 497 NSI GSGN M LDVL L + + + L G+ + + LRD ++ + Sbjct: 426 NSIWEGSGNVMCLDVLRALHREEGTRDAFLAELALAGGADPRLDAHVARLRDELADPTDA 485 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFL-DNCHS 540 + AR L E +ALA + + R +A+ F R D+ H+ Sbjct: 486 ELRARRLVEAMALALQGSLVVRHAPPAVAEAFCAARLAGDHGHA 529 >gi|238797598|ref|ZP_04641095.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC 43969] gi|238718595|gb|EEQ10414.1| hypothetical protein ymoll0001_5680 [Yersinia mollaretii ATCC 43969] Length = 548 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 184/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN N Sbjct: 11 LVFNQPEPLSNSNLFLSDMALREAVVREHAGWDGEALSLMGLQLGSQESLELGRLANNNP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ + +H W R + RAAR Sbjct: 71 PELLRYDAAGQRLDQVRFHPAWYVLMQELVKHRVHNLPWQED----ARIGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + K+W P + S YD QK + IG+ Sbjct: 127 LHAQVEAGSLCPITMTFGAIPLLQQTLPPLFKNWLPPLLSDRYDSHQTVGSQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ G + + Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLGMRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK+K+GNRSNA+ E+EF +LLGD + M Sbjct: 247 FLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDQATAWLLGDEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALLMRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ E + + E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EKPNEAHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPMAIEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ AA L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 518 >gi|188590973|ref|YP_001795573.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] gi|170937867|emb|CAP62851.1| isovaleryl CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 556 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 179/527 (33%), Positives = 281/527 (53%), Gaps = 25/527 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQ P N + SD ++ A + H + L G + Q+ A AN +TP+ Sbjct: 10 FNQVPDLAHYNLFDSDPMVRAALERLGGGWHADALRQFGARLGEPEVQQWAADANRHTPE 69 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 LH + GER D VEFHP WHALL L + + R A R A +L Sbjct: 70 LHTHSRTGERIDMVEFHPGWHALLGLLRSQQLQALPFAQP-----RAGAWAARTAGYFLQ 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 AQ+E+G L P++T AS+ L + + P++++ +D + K+++ IG+G+T Sbjct: 125 AQVESGSLCPPTMTFASIPVLRKEAALFAELEPRLYATGHDARDLPWRDKSAIMIGMGMT 184 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 EK+GG+D+ A T+ + + Y L+GHKWF S+PM DA +++A++ +G + CF Sbjct: 185 EKQGGSDVRANTTVARPVRGEGRGAEYALTGHKWFFSAPMCDAHLVVARMGAEDGPLSCF 244 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR +DGS N + QRLK+K+GNRSNA+ E+EF + G L+G+ + +M Sbjct: 245 FVPRFRDDGSRNAVQIQRLKDKLGNRSNASSEVEFRDAAGILIGEEGRGIPTIIEMATST 304 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD I S + +R + +A+H+ R R G +L DQP+M+ +AD+AL+ AAT L L Sbjct: 305 RLDCVIGSAAILRAAFVQALHHTRHRSAFGRLLCDQPLMRNVLADLALESEAATLLMMEL 364 Query: 377 ANSFDEAKSRSEE---AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++F A+ + + AA+ R++ P K+W CK EAME GG+GY+EE +AR Sbjct: 365 GHAFAHAEGDNPDPLAAAWKRVVTPAAKFWVCKRTLEATGEAMEVWGGNGYVEEGPMARL 424 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK------KVITIL 487 YRE+P NSI GSGN M LDVL L++ + +L L + G + +L Sbjct: 425 YREAPVNSIWEGSGNIMCLDVLRALQRNPDDGARLLQDLSRRAGGHPSVRAELASLQAML 484 Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 R+ ++ + AR + + L + AA + + A++F+ +R Sbjct: 485 REP---AEQQEANARRFAQGLVLTAQAALMLAHADPENAELFVASRL 528 >gi|190575394|ref|YP_001973239.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] gi|190013316|emb|CAQ46950.1| putative acyl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] Length = 545 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 171/454 (37%), Positives = 252/454 (55%), Gaps = 28/454 (6%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE--------LELLGEYVLSCT 69 P ++ LNQPP F G ++ D L VH+E L + G + Sbjct: 11 PFETHVVLNQPPPFAGRQLWTDDVALA-------EAVHREGAGALAPRLAVYG----ALA 59 Query: 70 AQELARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 EL R+ AN + P+L + G R D VEFHPA+H L+ + G+ W EP Sbjct: 60 GDELYRLGFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMSAAKQHGVAGLSW---HEP 116 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 + AH RAA YL Q EAG ++T A++ L + P + +WA K + YDP Sbjct: 117 --QPGAHVARAALSYLHHQAEAGTSCPLTMTHAAVAVLQSQPHL-AEWARKAAAPVYDPR 173 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246 + K + +G+G+TEK+GG+D+ A +++ + I Y L GHKWF S+PM D F++L Sbjct: 174 DVPVADKNGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVL 233 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 AQ G + C L+PR L DG N RLK+K+G+ SNA+ E+EF + +G+ Sbjct: 234 AQAPGGLTCLLMPRRLADGDRNAFRLMRLKDKLGDWSNASSEVEFCGAQAWRVGEEGRGV 293 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + M ++ LD + + + MR++LA+A+H+AR R G +L++ +M +AD+AL+ Sbjct: 294 ATIIGMVMMTRLDCMLGAAAEMRMALAQALHHARHRRTFGKLLVEHSLMTNVLADLALES 353 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAT L+ R+A + D A + EAA AR+ + KYW CK APA + EA EC+GG+GY+E Sbjct: 354 EAATVLAMRIARAVDRAGVDANEAAMARLGTALGKYWLCKRAPAFVNEAQECLGGAGYVE 413 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E + R YR++P NSI GSGN LDVL L + Sbjct: 414 ESMLPRLYRQAPLNSIWEGSGNIQCLDVLRALAR 447 >gi|108809892|ref|YP_653808.1| isovaleryl CoA dehydrogenase [Yersinia pestis Antiqua] gi|108813449|ref|YP_649216.1| isovaleryl CoA dehydrogenase [Yersinia pestis Nepal516] gi|150260574|ref|ZP_01917302.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125] gi|161484880|ref|NP_667976.2| isovaleryl CoA dehydrogenase [Yersinia pestis KIM 10] gi|165926727|ref|ZP_02222559.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936433|ref|ZP_02225001.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011875|ref|ZP_02232773.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214000|ref|ZP_02240035.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400611|ref|ZP_02306120.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419181|ref|ZP_02310934.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423560|ref|ZP_02315313.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467835|ref|ZP_02332539.1| isovaleryl CoA dehydrogenase [Yersinia pestis FV-1] gi|218927585|ref|YP_002345460.1| isovaleryl CoA dehydrogenase [Yersinia pestis CO92] gi|229840256|ref|ZP_04460415.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842334|ref|ZP_04462489.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis str. India 195] gi|229903927|ref|ZP_04519040.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516] gi|270489085|ref|ZP_06206159.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis KIM D27] gi|294502490|ref|YP_003566552.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003] gi|108777097|gb|ABG19616.1| acyl-CoA dehydrogenase [Yersinia pestis Nepal516] gi|108781805|gb|ABG15863.1| putative acyl-CoA dehydrogenase [Yersinia pestis Antiqua] gi|115346196|emb|CAL19064.1| putative acyl-CoA dehydrogenase [Yersinia pestis CO92] gi|149289982|gb|EDM40059.1| putative acyl-CoA dehydrogenase [Yersinia pestis CA88-4125] gi|165915549|gb|EDR34158.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921350|gb|EDR38574.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989234|gb|EDR41535.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204795|gb|EDR49275.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166963175|gb|EDR59196.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049979|gb|EDR61387.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057730|gb|EDR67476.1| acyl-CoA dehydrogenase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679697|gb|EEO75800.1| putative acyl-CoA dehydrogenase [Yersinia pestis Nepal516] gi|229690644|gb|EEO82698.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis str. India 195] gi|229696622|gb|EEO86669.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2] gi|262360521|gb|ACY57242.1| putative acyl-CoA dehydrogenase [Yersinia pestis D106004] gi|262364468|gb|ACY61025.1| putative acyl-CoA dehydrogenase [Yersinia pestis D182038] gi|270337589|gb|EFA48366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Yersinia pestis KIM D27] gi|294352949|gb|ADE63290.1| putative acyl-CoA dehydrogenase [Yersinia pestis Z176003] gi|320013750|gb|ADV97321.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 547 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 276/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 11 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 71 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S +Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + ++RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 247 FLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518 >gi|21957352|gb|AAM84227.1|AE013666_7 putative acyl coenzyme A dehydrogenase [Yersinia pestis KIM 10] Length = 557 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 276/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 21 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 80 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 81 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 136 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 137 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 196 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S +Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 256 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + ++RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 257 FLPKILPDGTHNAIRFERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 316 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 317 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 376 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 377 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 435 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 495 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 496 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 528 >gi|264680924|ref|YP_003280834.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262211440|gb|ACY35538.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 549 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 185/526 (35%), Positives = 284/526 (53%), Gaps = 28/526 (5%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNTPQ 83 NQ P N Y+SD +L A+ EL+ G EY T + A AN+ P+ Sbjct: 8 NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLR-AAEEANHFEPE 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141 LH + P G+R D+V FHPAWH ++ + +G+ S P R A A L+ Sbjct: 67 LHTHSPSGDRIDQVRFHPAWHQMMAIARRNGI-------SNLPFTDQRPTAWAAYGASLF 119 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 + +Q+E+G ++T AS+ + P+++ P + S +YD + K S+ +G+G Sbjct: 120 MHSQIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMG 179 Query: 202 LTEKRGGTDIAAITSQGQKI----SDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR- 252 +TE++GG+D+ + T++ + S G Y ++GHKWF S+PM D ++LA+ E R Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 CF VPR DGS N + QRLK+K+GNRSN++ E+EF N +G L+G + +M Sbjct: 240 PTCFFVPRWRPDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD A+ S MR +L +A+HY R RH G L +QPVM +AD+AL+ AAT L Sbjct: 300 ATYTRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + LA F + + A+ RI+ P K+W CK A EAME GG+GY+E + R Sbjct: 360 AMDLAARFGSEDALDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRD 489 +RE+P NSI GSGN M LDVL + + + L L +++GS + + LR+ Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHL-REVGSEDAVLRAQVDKLRE 476 Query: 490 SISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +++L +D + AR T+++A A + + +D A F+ +RF Sbjct: 477 AVTLPPQDLEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRF 522 >gi|50083701|ref|YP_045211.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1] gi|49529677|emb|CAG67389.1| putative acyl-CoA dehydrogenase (AidB) [Acinetobacter sp. ADP1] Length = 548 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 177/533 (33%), Positives = 280/533 (52%), Gaps = 46/533 (8%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ N Y SD L ++ + K+L GE + + LA AN + PQLH Sbjct: 11 NQFNELCNYNLYQSDVPLQEILKRYGHHEQKQLTTFGEILGHQRSYMLADQANRHLPQLH 70 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK---IRAARLYL 142 + G R D+VEFHPAWH +R++ LH P + A AAR YL Sbjct: 71 GFDARGRRIDEVEFHPAWHQWMRQNREYALHA-------HPFITSAAQTGWVEWAARFYL 123 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q+E+G L ++T S+ + ++ + K+ S +YD + QK+S+ +G+G+ Sbjct: 124 SGQVESGSLCPSAMTLGSIPLIQRESKLWQTLGKKLLSCDYDERDILISQKSSIWVGMGM 183 Query: 203 TEKRGGTDIAA---------ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGR 252 TEK+GG+D+ A I+ +G++ Y L+GHKWF S+PMSDA +++AQ + Sbjct: 184 TEKQGGSDVRANQTFAKPVGISGRGEE-----YLLTGHKWFFSAPMSDAHLVVAQTSQEE 238 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + CF VPR L +GS N + Q+LKNK+GN+SN++ E+EF + G ++G+ + +M Sbjct: 239 LACFFVPRWLSNGSKNHIEIQQLKNKVGNKSNSSSEVEFRDALGIMIGEEGRGIPTIIEM 298 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L ++ S + +R +L + I Y R+R G +L DQP+M+ + D+AL+ AA L Sbjct: 299 ATYTRLTCSVGSTAILRQALVQCIAYTRQRRAFGRVLADQPLMQAVLTDMALETEAALHL 358 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 S LA + S+ A+ R++ P K+W CK A + EAME GG+GY+E ++R Sbjct: 359 SMHLAACYQRDDDISQ--AWVRLLTPAAKFWICKRAVELTGEAMEVFGGNGYVETGIMSR 416 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF----------STLEQDLGSSGKK 482 ++E+P NSI GSGN M LDVL +++ + LF S L QDL + Sbjct: 417 LFKEAPVNSIWEGSGNIMCLDVLRAIQRHPESIQVLFDSFGDVTAQESCLYQDLQA---- 472 Query: 483 VITILRDSISLCKEDKGL-ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L+D + E AR ++ L + A + R + ++D F+++R+ Sbjct: 473 ----LKDELQYSSEQLQFSARHFVSRLVLLTQAVLMRRYAPHWVSDAFIQSRY 521 >gi|262369998|ref|ZP_06063325.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter johnsonii SH046] gi|262315037|gb|EEY96077.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter johnsonii SH046] Length = 550 Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 175/519 (33%), Positives = 281/519 (54%), Gaps = 36/519 (6%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 N + +D++L ++ + S L +G+ V S + A +AN +TP LHA+ G R Sbjct: 21 NLFETDTVLQEILTRYGSQDQPRLTEMGKVVGSAEYYDYADLANRHTPILHAFDARGRRK 80 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-------AARLYLMAQLE 147 + +EFHPAWH + GL +R F+ H AAR YL Q+E Sbjct: 81 NFIEFHPAWHKWM------GL-----NRQFDTHAHPFNHPNSTSKWVEWAARFYLAGQVE 129 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G+L S+T S+ + P + K+ S EYD + QK S+ +G+G+TEK+G Sbjct: 130 CGNLCPNSMTLGSIPLIQREPELWAKIGDKLLSTEYDERDVPISQKKSIWLGMGMTEKQG 189 Query: 208 GTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLL 262 G+D+ A + +++ Y L+GHKWF S+PM DA +++A+ E + CF VPR L Sbjct: 190 GSDVRANETIAVPVAEAGRGQAYLLTGHKWFFSAPMCDAHLVVAKTEQDGLACFFVPRWL 249 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 E+G+ N + QRLK+K+GNRSN++ E+EF +G ++G+ + +M L ++ Sbjct: 250 ENGTKNPIHIQRLKDKVGNRSNSSSEVEFKEAWGIMIGEAGRGIPTIIEMANYTRLTCSV 309 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + R +L + I Y R+R G L +QP+M+ +AD+AL+ AA LSF LA+ ++ Sbjct: 310 GSTAMFRQALVQCIAYTRQRKAFGKHLAEQPLMRAVLADLALETEAAMQLSFHLAHCYET 369 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + S A+ RIM P +K+W CK A + E ME GG+GY++ +AR ++E+P N+I Sbjct: 370 DDALS--VAWKRIMTPASKFWICKRAVELTGEMMEIFGGNGYVDNGIMARIFKEAPVNTI 427 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK------- 495 GSGN M LDVL + + E LF QDL ++ + + ++ SL + Sbjct: 428 WEGSGNVMCLDVLRAISRDVESIEILF----QDLATTAMQDEQLKQELKSLFQLFQQTPE 483 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 E + + R L ++ + + A L R N +AD F+++R+ Sbjct: 484 ELQFMGRSLVSRLVILAQAVLLKRHAPNYVADGFIQSRY 522 >gi|238783563|ref|ZP_04627585.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC 43970] gi|238715618|gb|EEQ07608.1| hypothetical protein yberc0001_9070 [Yersinia bercovieri ATCC 43970] Length = 548 Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 182/516 (35%), Positives = 276/516 (53%), Gaps = 17/516 (3%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ ++L L+G + S + EL R+AN N Sbjct: 11 LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDREDLSLIGLQLGSQESLELGRLANSNP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ I H W R + RAAR Sbjct: 71 PELLRYDAVGQRLDQVRFHPAWYVLMQELIKHRAHNLPWQED----ARIGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L + P + +W P + S YDP QK + IG+ Sbjct: 127 LHAQVEAGSLCPITMTFGAIPLLQQSLPPLFHNWLPPLLSDRYDPHQVVGSQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + + Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLEARGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK+K+GNRSNA+ E+EF + +LLGD + M Sbjct: 247 FLPKILPDGTYNAIRLERLKDKLGNRSNASSEVEFDHATAWLLGDEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALLMRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ E + E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EKPHEAHEQIFSRLLTPAAKYRICGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493 P NSI GSGN M LDVL L K ++ +Q F + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPAAIDMLQQEFYPVRGQ-NRLFDRAWRQLQQRLKT 484 Query: 494 CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ AA L R +AD + Sbjct: 485 PKEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 518 >gi|162421077|ref|YP_001605267.1| isovaleryl CoA dehydrogenase [Yersinia pestis Angola] gi|162353892|gb|ABX87840.1| acyl-CoA dehydrogenase family protein [Yersinia pestis Angola] Length = 547 Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 11 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 71 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S +Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGNTALLLRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518 >gi|45435248|gb|AAS60808.1| putative acyl-CoA dehydrogenase [Yersinia pestis biovar Microtus str. 91001] Length = 557 Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 21 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 80 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 81 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 136 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 137 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 196 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S +Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 256 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 257 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 316 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 317 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 376 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 377 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 435 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 495 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 496 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 528 >gi|308451696|ref|XP_003088765.1| hypothetical protein CRE_23827 [Caenorhabditis remanei] gi|308245410|gb|EFO89362.1| hypothetical protein CRE_23827 [Caenorhabditis remanei] Length = 552 Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 175/523 (33%), Positives = 276/523 (52%), Gaps = 25/523 (4%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ N ++D +L ++ + S + L + S E A +AN +TP+LH Sbjct: 14 NQFDELQNYNLLTTDQVLQEILQRYGSQDQQRLTEFSQIAGSTEYYEYADLANRHTPELH 73 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 ++ G R D +EFHPAWH +R + H F AAR +L Q Sbjct: 74 SFDARGRRKDFLEFHPAWHKWMRLNRQFDTHA----HPFNHPQSSSKWVDWAARFFLSGQ 129 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E G+L S+T S+ + P + K+ S EYD + QK S+ +G+G+TEK Sbjct: 130 VECGNLCPNSMTLGSIPLIQNEPELWAKVGEKLLSTEYDERDIPISQKKSIWLGMGMTEK 189 Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPR 260 +GG+D+ A ++ +++ Y L+GHKWF S+PM DA +++A+ E + CF VPR Sbjct: 190 QGGSDVRANETRAVPVAESGRGQAYLLTGHKWFFSAPMCDAHLVVAKTEQDGLACFFVPR 249 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 LEDG+ N + QRLK+K+GNRSN++ E+EF N +G ++G+ + +M L Sbjct: 250 WLEDGTKNPVQVQRLKDKVGNRSNSSSEVEFKNAWGIMIGEAGRGIPTIIEMANYTRLTC 309 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 ++ S + +R +L + I Y R+R G L +QP+M+ +AD+AL+ AA LSF LA+ + Sbjct: 310 SVGSSAMLRQALVQCIAYTRQRKAFGKHLAEQPLMQAVLADLALETEAAMQLSFHLAHCY 369 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 + S A+ RIM P K+W CK + E ME GG+GY++ +AR ++E+P N Sbjct: 370 ESDDELS--LAWRRIMTPAAKFWVCKRTVELTGEMMEVFGGNGYVDTGIMARIFKEAPVN 427 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKG 499 +I GSGN M LDVL +++ E LF + Q +IL+D + +L K G Sbjct: 428 TIWEGSGNVMCLDVLRAIQRDRESIEVLFKSFAQVASQD-----SILQDELQALFKLFSG 482 Query: 500 L--------ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L AR L ++ + + A L + + +AD F+ R+ Sbjct: 483 LQADELQFMARSLVSRLVILAQAILLKQHAPDFVADAFIATRY 525 >gi|145600839|ref|YP_001164915.1| isovaleryl CoA dehydrogenase [Yersinia pestis Pestoides F] gi|161511444|ref|NP_991931.2| isovaleryl CoA dehydrogenase [Yersinia pestis biovar Microtus str. 91001] gi|229836644|ref|ZP_04456810.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A] gi|145212535|gb|ABP41942.1| acyl-CoA dehydrogenase [Yersinia pestis Pestoides F] gi|229706328|gb|EEO92336.1| putative acyl-CoA dehydrogenase [Yersinia pestis Pestoides A] Length = 547 Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 11 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 71 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S +Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEVYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518 >gi|134294247|ref|YP_001117982.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134137404|gb|ABO53147.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 550 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 179/487 (36%), Positives = 272/487 (55%), Gaps = 16/487 (3%) Query: 57 ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116 +L+ G + S LA AN +TP+L+A+ G R D+VEFHPAWH LL ++GL Sbjct: 42 QLDAYGARLGSADTARLADEANRHTPELNAFDRRGRRIDRVEFHPAWHTLLGMYRNEGL- 100 Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 S+ R R+ AA YL Q+EAG L ++T A++ L P + Sbjct: 101 VSLAFRD----TRRGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPLLQKEPALWALLRD 156 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHK 232 K++S +YDP + K S+ G+G+TEK+GG+D+ A T+ G G Y L GHK Sbjct: 157 KLYSDDYDPRDVPLAGKRSIWFGMGMTEKQGGSDVRANTTLATASGAGGRGGEYRLRGHK 216 Query: 233 WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 WF S+PM DA +++A+ E G CF VPR DG+ N + QRLKNK+GNRSN++ E+E Sbjct: 217 WFFSAPMCDAHLVVARTEAGGPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIEL 276 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 ++ +G +LGD + +M L+ + S + +R + +AI Y R+RH G L + Sbjct: 277 NDAWGIMLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAE 336 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 QP+M+ +AD+AL+ AA L+ R+A++F E E A+ RI+ P K+W CK A + Sbjct: 337 QPLMRTVLADLALESEAALVLAMRIADAF-ELDDSPRERAWKRIVTPAAKFWVCKRAVEL 395 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 E ME GG+GY+++ IAR +RE+P NSI GSGN M LDVL + + + L + Sbjct: 396 TGEVMEVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAE 455 Query: 472 LEQDLGSSGKKV---ITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIAD 527 L + LG+ ++ + +LR ++ + + AR +++AL + A L R +AD Sbjct: 456 LTE-LGAGEPRIRAALDVLRAMLAAPADALEASARLFAQRLALVAQACLLTRDAPAAVAD 514 Query: 528 VFLENRF 534 F+ R Sbjct: 515 AFIATRL 521 >gi|254520907|ref|ZP_05132962.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14] gi|219718498|gb|EED37023.1| acyl-CoA dehydrogenase family protein [Stenotrophomonas sp. SKA14] Length = 545 Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 169/447 (37%), Positives = 251/447 (56%), Gaps = 14/447 (3%) Query: 18 PSDSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARM 76 P ++ LNQPP F G + ++ D +L+ A+ L + G + EL R+ Sbjct: 11 PFETHVVLNQPPPFAGRHLWTDDVALMEAVQREGAGGFAPRLAVYG----ALAGDELYRL 66 Query: 77 ---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 AN + P+L + G R D VEFHPA+H L+ + G+ W EP + AH Sbjct: 67 GFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGTAKRHGVAGLSW---HEP--QPGAH 121 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 RAA YL Q EAG ++T A++ L P + +W+ K + YDP + K Sbjct: 122 VARAALSYLHHQAEAGTSCPLTMTHAAVAVLSPHPHL-AEWSRKAAAPVYDPRDVPVADK 180 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253 + +G+G+TEK+GG+D+ A +++ + I Y L GHKWF S+PM D F++LAQ G + Sbjct: 181 AGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGHKWFFSAPMCDGFLVLAQAPGGL 240 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 C L+PR L DG N RLK+K+G+ +NA+ E+EF + +G+ + M Sbjct: 241 TCLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEVEFCGAQAWRVGEEGRGVATIIGMV 300 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 ++ LD + + + MR++LA+A+H+AR R G +L+D P+M +AD+AL+ AAT LS Sbjct: 301 MMTRLDCMLGAAAEMRMALAQALHHARHRRTFGTLLVDHPLMANVLADLALESEAATVLS 360 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R+A + D A EAA AR+ + KYW CK A A + EA EC+GG+GY+EE + R Sbjct: 361 MRIARAVDRAGVDGNEAALARLGTALGKYWVCKRAAAFVNEAQECLGGAGYVEESMLPRL 420 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 YR++P NSI GSGN LDVL L + Sbjct: 421 YRQAPLNSIWEGSGNIQCLDVLRALAR 447 >gi|320168853|gb|EFW45752.1| acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 631 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 189/572 (33%), Positives = 277/572 (48%), Gaps = 63/572 (11%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQPP N +S D LV + + LE G + S +L AN P L Sbjct: 28 NQPPPLADYNVFSQDRALVETVKRHGAGWEAAGLERFGAVIGSKRVIDLGHTANRFPPIL 87 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ----AHKIRAARL 140 + G R D+VEFHP++H L+ I G+ W+ + AH RAA L Sbjct: 88 KTHDRYGNRIDEVEFHPSYHELMSIGIGAGVASFAWNAIAAAPAGTKSVRGAHVARAAYL 147 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ-------- 192 YLM+Q E G S+T A + + P++ + W P + SREYD +A Sbjct: 148 YLMSQAEYGVCCPMSMTYAGVPVIRKLPKLAELWEPLLLSREYDSRFQAAAIASASASAA 207 Query: 193 --------KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI------YCLSGHKWFLSSP 238 K IG+ +TEK+GG+D+ A T+ + ++ Y L GHKWF S+P Sbjct: 208 AAGSSNQGKRGATIGMAMTEKQGGSDVRANTTIARPVNPSQTGPGSEYLLWGHKWFCSAP 267 Query: 239 MSDAFIMLAQVE-----------------------GRVGCFLVPRLLEDGSPNGLCYQRL 275 MSD F+ LA + G + CF VPR DG+ N L RL Sbjct: 268 MSDGFLTLAYIPRETDPATATSAAASSAAGKSAAAGAMSCFFVPRFRPDGTKNNLTVMRL 327 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 K+K+GN++NA+ E+E+ NT+ L+ + + +M LD +I + MR+ LA A Sbjct: 328 KDKLGNKANASSEIEYHNTWAVLVSEPGRGVPTIIEMVNHTRLDCSIGGAAIMRIGLAHA 387 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 +H+ R G L+DQP+MK +AD+A++ AATA++FR+A SFD +E+ +ARI Sbjct: 388 LHHVTYRSAFGNRLLDQPLMKSVLADLAIEAEAATAMAFRIAESFDMGSGSKQESLFARI 447 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 PITKYW CK P + EAMEC GG+GY E+ +AR YRE+P N+I GSGN + LDVL Sbjct: 448 ATPITKYWICKRTPNHVYEAMECHGGNGYTEDFVLARAYREAPLNAIWEGSGNVIALDVL 507 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA-------------R 502 ++ + ++ D + ++D + + L+ R Sbjct: 508 RAMQTAPEAIQAFLQEIKTDTSGKNADLDQAVQDLEAQIANQQKLSRDGNAQQAMEANGR 567 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L + +AL + L R ++ADVF NR Sbjct: 568 NLVDLMALTLQGSLLVRHAPQEVADVFCRNRL 599 >gi|153947947|ref|YP_001402597.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 31758] gi|170026003|ref|YP_001722508.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis YPIII] gi|152959442|gb|ABS46903.1| acyl-CoA dehydrogenase family protein [Yersinia pseudotuberculosis IP 31758] gi|169752537|gb|ACA70055.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis YPIII] Length = 547 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 184/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 11 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 71 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GN SNA+ E+EF N +LLGD + M Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518 >gi|296394926|ref|YP_003659810.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985] gi|296182073|gb|ADG98979.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM 44985] Length = 544 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 178/526 (33%), Positives = 281/526 (53%), Gaps = 14/526 (2%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 MNQ H NQ P G + +L AL E++ LGE S AQ Sbjct: 1 MNQTHT------VFNQVPPLTGWSLAEHPALAEALQRENAQAALPEIQTLGELAGSAEAQ 54 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 + +A + PQL + G R D+V + P++H L+R ++ G+H + W +P R Sbjct: 55 QWGDLAEAHPPQLKTHDRYGNRIDEVVYDPSYHQLMRTAVEHGVHAAAW---ADP--RPF 109 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AH RAA++ + Q + GH+ ++T A + AL ++ + P + +REY+P + Sbjct: 110 AHLARAAKMVVWGQTDPGHICPITMTYAVVPALRANEKLSAEHEPLLTNREYEPGLRPMS 169 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 K + G+ +TEK+GG+D+ A T+ DG Y ++GHKWF S+PMSD F+ LAQ G Sbjct: 170 LKRGLIAGMSMTEKQGGSDVRANTTTAVAQQDGSYRITGHKWFTSAPMSDFFLTLAQTPG 229 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + CF VPR+L DG+ N QRLK+K+GNRSNA+ E+E+ + +L+GD + + Sbjct: 230 GLSCFFVPRVLPDGTRNNFFLQRLKDKLGNRSNASSEVEYDDATAWLVGDEGKGVKTIVE 289 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M + LD A+ + +GM V++A+A H+A+ R G L DQP+M+ +AD+A++ A+ Sbjct: 290 MVNVTRLDCALGTSTGMSVAVAQAAHHAKHRSAFGARLADQPLMRNVLADLAVEAEASLT 349 Query: 372 LSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 LA+ D++ + +A RI ++KY+ CK P EA+EC+GG+GY+EE + Sbjct: 350 TGLWLASLLDKSVAGDGQAKTLLRISLAVSKYFICKRGPVHAGEALECLGGNGYVEESRM 409 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILR 488 R YRE+P S+ GSGN LD L + K F+ L++ G+ + + L+ Sbjct: 410 PRIYREAPLLSVWEGSGNVAALDALRAIAKQPESLAVFFAELDKARGADARLDAAVDSLK 469 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + AR + +ALA + L R G +AD F +R Sbjct: 470 GQFGDFETIEHRARLIVGSMALALQGSLLVRYGHPAVADAFTASRL 515 >gi|238795293|ref|ZP_04638872.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC 29909] gi|238725378|gb|EEQ16953.1| hypothetical protein yinte0001_42110 [Yersinia intermedia ATCC 29909] Length = 547 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 179/515 (34%), Positives = 274/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN N Sbjct: 11 LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGETLSLIGLQLGSSESLELGRLANTNP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ ++ LH W R + RAAR Sbjct: 71 PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRLHNLPWQED----ARIGSFAARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+E+G L ++T ++ L T P + ++W + S +DP QK + IG+ Sbjct: 127 LHAQVESGSLCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRFDPHQSIGSQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + + + Y L GHKWF S P SDA ++LAQ +G + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLEGRGNGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DGS N + +RLK+K+GNRSNA+ E+EF N +LLGD + M Sbjct: 247 FLPKILPDGSYNAIRLERLKDKLGNRSNASSEVEFDNATAWLLGDEGDGVRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKPLVDQPLMRQVLSRMALRLEGHTALLMRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+++ E + E ++R++ P KY C +AEAME +GG GY E+ + R YRE Sbjct: 367 ASAW-EKSDEAHEQIFSRLLTPAAKYRVCGQGSGFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPAAIEMLQQEFYPVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R + D + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPPLVDAW 518 >gi|299530916|ref|ZP_07044330.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298721137|gb|EFI62080.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 549 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 184/526 (34%), Positives = 284/526 (53%), Gaps = 28/526 (5%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLG-EYVLSCTAQELARMANYNTPQ 83 NQ P N Y+SD +L A+ EL+ G EY T + A AN+ P+ Sbjct: 8 NQAPELKDYNVYTSDPVLQRAVTRGGAQWRDPELQRQGAEYGAEATLR-AAEEANHFEPE 66 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV--RKQAHKIRAARLY 141 LH + P G+R D+V FHPAWH ++ + +G+ S P R A A L+ Sbjct: 67 LHTHSPSGDRIDQVRFHPAWHQMMTIARLNGI-------SNLPFTDQRPTAWAAYGASLF 119 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 + +Q+E+G ++T AS+ + P+++ P + S +YD + K S+ +G+G Sbjct: 120 MHSQIESGSTCPTTMTKASIPLVRINPQLNAVLGPLLESTDYDARDIPAEGKRSITVGMG 179 Query: 202 LTEKRGGTDIAAITSQGQKI----SDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGR- 252 +TE++GG+D+ + T++ + S G Y ++GHKWF S+PM D ++LA+ E R Sbjct: 180 MTERQGGSDVRSNTTRAVALNPSGSSGPWGEEYLITGHKWFFSAPMCDGHLVLAKTEERG 239 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 CF VPR DGS N + QRLK+K+GNRSN++ E+EF N +G L+G + +M Sbjct: 240 PTCFFVPRWRSDGSKNAIHIQRLKDKVGNRSNSSSEVEFDNAWGVLIGQEGRGISTIIEM 299 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD A+ S MR +L +A+HY R RH G L +QPVM +AD+AL+ AAT L Sbjct: 300 ATYTRLDCALSSAGFMRQALVQALHYTRNRHAFGLPLAEQPVMTGLLADMALESEAATWL 359 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + LA F + + A+ RI+ P K+W CK A EAME GG+GY+E + R Sbjct: 360 AMDLAARFGSEDALDQ--AWRRIVTPAAKFWNCKRAVGYTGEAMEVFGGNGYVETGPMGR 417 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG---KKVITILRD 489 +RE+P NSI GSGN M LDVL + + + L L +++GS + + LR+ Sbjct: 418 LFREAPVNSIWEGSGNVMCLDVLRAIARNPDDAHLLLDHL-REVGSEEAVLRAQVDKLRE 476 Query: 490 SISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 +++L ++ + AR T+++A A + + +D A F+ +RF Sbjct: 477 AVTLPPQELEREARRFTQRLATTVQATLMLQHAGSDSASAFIGSRF 522 >gi|171315814|ref|ZP_02905045.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171099003|gb|EDT43788.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 550 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 184/518 (35%), Positives = 276/518 (53%), Gaps = 15/518 (2%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL L+ G + S LA AN +TP+L Sbjct: 10 NQFDELVDYNLFATDIALRDALARAGADWAVPRLDAYGARLGSADTARLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHPAWH LL ++G S+ R P AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + K++S +YDP + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ I G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATAIGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + +M L Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y RRRH G L +QP+M+ +AD+AL+ AA L+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRRRHAFGRALAEQPLMRTVLADLALESEAALVLAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497 NSI GSGN M LDVL + + + L + L + + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAELAGLGAGEPRIRAALDALRAMLAAPADA 483 Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR +++AL + A L R + +AD F+ R Sbjct: 484 LEASARLFAQRLALVAQACLLRRDAPSAVADAFVATRL 521 >gi|51594786|ref|YP_068977.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis IP 32953] gi|186893795|ref|YP_001870907.1| isovaleryl CoA dehydrogenase [Yersinia pseudotuberculosis PB1/+] gi|51588068|emb|CAH19674.1| putative acyl-CoA dehydrogenase [Yersinia pseudotuberculosis IP 32953] gi|186696821|gb|ACC87450.1| acyl-CoA dehydrogenase domain protein [Yersinia pseudotuberculosis PB1/+] Length = 547 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 274/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L L+G + S + EL R+AN + Sbjct: 11 LVFNQPEPLSNSNLFLSDLALREAVVREHAGWDGENLSLIGLQLGSLESLELGRLANAHP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R +V FHPAWH L++ IH +H W R + RAAR Sbjct: 71 PELLRYDGAGQRLGQVRFHPAWHVLMQGLIHHRVHNLPWQED----ARNGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ++AG L ++T ++ L T P + ++W + S YDP QK + IG+ Sbjct: 127 LHAQVDAGALCPITMTFGAIPLLQQTLPPLFQNWLSPLLSDRYDPHLSLGNQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + +S Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNTTRAEPLSIRGQGEAYRLIGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GN SNA+ E+EF N +LLG+ + M Sbjct: 247 FLPKILPDGTHNAIRLERLKEKLGNCSNASSEVEFDNATAWLLGEEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R V G L++QP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSVALYHALQRQVFGKALVEQPLMRQVLSRMALRLEGHTALLLRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A ++ EA E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 367 ARAW-EASGEVHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTLRKLPTAVEMLQQEFYSVRGQNRLFDRAWRQLQQRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ A+ L R +AD + Sbjct: 486 KEEQG--RALTQQLFDLCCASQLLRFASPRLADAW 518 >gi|85712061|ref|ZP_01043114.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145] gi|85694051|gb|EAQ31996.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145] Length = 539 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 190/538 (35%), Positives = 279/538 (51%), Gaps = 16/538 (2%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNT 81 ALNQPP I N Y SD L F S E LG + S E AN+ Sbjct: 1 MALNQPPYLINYNVYQSDRFLQQCAQYFAESNEQDERVKLGSLLGSAQHIERCYAANHYP 60 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L + GER + + +H ++H L++ + LH +W RS P +H R R Y Sbjct: 61 PELFTHDRYGERINHIAYHASYHELMQIAAEQQLHNGVW-RSVSPY----SHVERTIRYY 115 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 L +QLEAGH ++T A++ + +P + ++ YD + +K+++ +G+G Sbjct: 116 LNSQLEAGHGCPITMTFAAIPVIQQSPLYPQL-QEQLLQPLYDGRDIPFYEKSALTVGMG 174 Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 +TEK+GG+D+ + T+ QG +Y L+GHKWFLS+PMSD F+MLAQ + +GCF Sbjct: 175 MTEKQGGSDVRSNTTHATPQGATGEGEVYLLNGHKWFLSAPMSDLFLMLAQTKHGLGCFS 234 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR EDG+ NG+ Q+LK K+GN+SNA+ E+E ++ G LLG + DM + Sbjct: 235 VPRWREDGTRNGIHIQQLKQKMGNQSNASCEVELNDVEGRLLGSEGKGVRTIIDMVAMTR 294 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 D I S + +R SL +A+H+ R G LI+QP+M + D+A++ A + +A Sbjct: 295 FDCMIGSSALLRQSLVQALHHCHYRSAFGARLIEQPLMINLLCDMAMESECALLWTLTVA 354 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D S E AR++ P+ KYW CK AP V EAME IGG G +E + R YRE+ Sbjct: 355 QWLD--SSDIEAKRLARLLVPVGKYWICKRAPQVTYEAMEVIGGMGVMENTPMPRLYREA 412 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCK 495 P N+I GSGN LDVL EK L FS + + G + V+ L+ + Sbjct: 413 PINAIWEGSGNIQCLDVLRACEKDPELLSTWFSFIARSCGQYSRYDAVVERLQQELEKYP 472 Query: 496 EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAH 553 AR L ++IAL + AA + + + + EN L+ L G F+ AH Sbjct: 473 PSPFNARRLVDEIALLTQAALAIQHMQPERSRLICEN-LLNRSGRNLGTLVGDFDTAH 529 >gi|238787549|ref|ZP_04631347.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC 33641] gi|238724336|gb|EEQ15978.1| hypothetical protein yfred0001_20680 [Yersinia frederiksenii ATCC 33641] Length = 557 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 181/515 (35%), Positives = 273/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ ++L +G + S + EL R+AN N Sbjct: 21 LVFNQPEPLSNSNLFLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANTNP 80 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ ++ +H W R + RAAR Sbjct: 81 PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 136 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T S+ L T P W P + S YD +K + IG+ Sbjct: 137 LHAQVEAGSLCPITMTFGSIPLLQQTLPSQFHSWLPSLLSDRYDSHQVVATEKRGLLIGM 196 Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + + + Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLEVRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 256 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GNRSNA+ E+EF N +LLGD + M Sbjct: 257 FLPKILPDGTYNAVRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 316 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 317 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 376 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ + E+ ++R++ P KY C + A +AEAME +GG GY E+ + R YRE Sbjct: 377 ASAMGKTYDLQEQ-IFSRLLTPAAKYRVCGLGCAFVAEAMEVLGGIGYCEQSELPRLYRE 435 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K + L G + + L+ + Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTLRKLPTALDMLQQDFYPIRGQNRLFDRAWRQLQQRLKNP 495 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R LT+++ AA L R +AD + Sbjct: 496 KEEQG--RALTQQLFDLCCAAQLLRFASPPLADAW 528 >gi|197105439|ref|YP_002130816.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196478859|gb|ACG78387.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 551 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 188/543 (34%), Positives = 271/543 (49%), Gaps = 13/543 (2%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 LNQPP F G N Y D + A + L LG V S + AN P+ Sbjct: 16 LNQPPEFAGRNLYEIDVAFREAARREAGEWLDAPLSALGAAVGSEQVLDWGEQANRFPPE 75 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L + G R D+ FHPA+H L+ ++ +H W R H A L L Sbjct: 76 LVTFDRYGRRVDEARFHPAYHQLMALAMEHRIHDIAWTAE-----RPGGHVGHLATLALF 130 Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 Q EAG + ++T A++ AL T P V W K+ YD + QK + +G+ +T Sbjct: 131 TQAEAGVMCPINMTYAAVPALRTQPDVTGPWLDKLLGGRYDAPLRPIGQKAGITVGMAMT 190 Query: 204 EKRGGTDIAAITSQGQKISDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 EK+GG+D+ A T++ ++ G Y L GHKWF S+PMSD F+ LA E + CFLVPR Sbjct: 191 EKQGGSDVRANTTRAYRLETGDPRAYRLVGHKWFCSAPMSDGFLTLAYAERGLSCFLVPR 250 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + DG NG+ RLK+K+GN+SNA+ E+E+ + + LLGD + DM L + Sbjct: 251 ITPDGERNGIRVMRLKDKLGNKSNASSEIEYHDAYAQLLGDEGEGVKVIIDMVHHTRLGT 310 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 ++ MR++LA+A++ R LIDQP M IAD+A++ AA ALS R+A +F Sbjct: 311 MGGTLGIMRMALAQAVNQVSGRRAFQKTLIDQPAMTSVIADLAVEYEAAAALSMRVARAF 370 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A+AR+ + KYW K P + E MEC GG GY+EE + R +RESP N Sbjct: 371 DAEDPAGR--AFARLSVAVGKYWLTKRNPNFVYECMECHGGVGYVEETPMPRLFRESPLN 428 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDK 498 +I GSGN + LD+L L + E + + + G+ + L D ++ + + Sbjct: 429 AIWEGSGNVIALDILRTLGREPLALEAYAAEVAEARGADRRLDAAAEGLLDGLARHRPGE 488 Query: 499 GLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 AR E++AL A L R +AD F R D + +L G + A I+D Sbjct: 489 ADARRTAERMALVLQGALLVRHAPAAVADAFCATRLGDEGGRSFGILPGGADVAAIVDRQ 548 Query: 559 YLD 561 D Sbjct: 549 RFD 551 >gi|332160031|ref|YP_004296608.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664261|gb|ADZ40905.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862085|emb|CBX72251.1| protein aidB [Yersinia enterocolitica W22703] Length = 543 Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 178/515 (34%), Positives = 273/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N Y SD +L A++ ++L +G + S + EL R+AN N Sbjct: 7 LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 66 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ ++ +H W R + RAAR Sbjct: 67 PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 122 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + + W P + S YD QK + IG+ Sbjct: 123 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 182 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + +++ + ++ Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 183 GMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 242 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L D + N + +RLK K+GNRSNA+ E+EF N +LLGD + M Sbjct: 243 FLPKMLPDDTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 302 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++ +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 303 RFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 362 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 AN++ E + E ++R++ P KY C + +AEAME +GG GY E+ + R YRE Sbjct: 363 ANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 421 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL K + E L G + + L+ + Sbjct: 422 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQQRLKNP 481 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R +T+++ A+ L R +AD + Sbjct: 482 KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 514 >gi|238750080|ref|ZP_04611583.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380] gi|238711624|gb|EEQ03839.1| hypothetical protein yrohd0001_6600 [Yersinia rohdei ATCC 43380] Length = 551 Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 183/515 (35%), Positives = 275/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A++ + L +G + S + EL R+AN N Sbjct: 15 LVFNQPEPLSNSNLFLSDMALQEAVVREHAGWDGETLAQIGLQLGSQESLELGRLANANP 74 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G R D+V FHPAW+ L++ + +H W RK + RAAR Sbjct: 75 PELLRYDGAGLRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARKGSFVARAARFI 130 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + + W + S YD QK + IG+ Sbjct: 131 LHAQVEAGSLCPITMTFGAIPLLQQTLPPLFQGWLSPLLSNRYDSHQIVGNQKRGLLIGM 190 Query: 201 GLTEKRGGTDIAAITSQGQKI-SDG---IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + + S G Y L GHKWF S P SDA ++LAQ +G + CF Sbjct: 191 GMTEKQGGSDVLSNTTKAEPLDSRGHGEAYRLVGHKWFFSVPQSDAHLVLAQTDGGLSCF 250 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GNRSNA+ E+EF N +LLGD + M Sbjct: 251 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 310 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G +L++QP+M++ ++ +AL + TAL RL Sbjct: 311 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKVLVEQPLMRQGLSRMALRLEGHTALLMRL 370 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+++ +A E ++R++ P KY C A +AEAME +GG GY E+ + R YRE Sbjct: 371 ASAWGKA-GEPHEQIFSRLLTPAAKYRVCGQGSAFVAEAMEVLGGIGYCEQSELPRLYRE 429 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL L K N E L G + + L+ + Sbjct: 430 MPVNSIWEGSGNIMCLDVLRTLRKLPNALEMLQQEFYPVRGQNRLFDRGWRQLQQRLKNP 489 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R +T+++ AA L R +AD + Sbjct: 490 KEEQG--RAITQQLFDLCCAAQLLRFASPPLADAW 522 >gi|91788426|ref|YP_549378.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91697651|gb|ABE44480.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 579 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 172/472 (36%), Positives = 258/472 (54%), Gaps = 37/472 (7%) Query: 25 LNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + ++ L AL N P++ EL LG + S Q AR+AN + P+ Sbjct: 8 FNQPEPLADYNLFDTNRPLRDALKFNAPALDTTELAALGAMLGSTGMQTHARLANIHAPE 67 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-----------DRSFEPVVRKQ- 131 LH++ G R D+VEFHP++H L++ +I GLH + W + + P + + Sbjct: 68 LHSHDRFGRRLDQVEFHPSYHELMKLAIGAGLHGTPWASPHPGPLPEGEGTGHPAPKGKR 127 Query: 132 ----------------AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175 H +RAA L +LE L S+T A AL + ++ DWA Sbjct: 128 VRHPLPLGEGRGEGLSPHVLRAAGFMLFTELEPSVLCPISMTYAVTPALRSNAAIYADWA 187 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI-SDGI---YCLSGH 231 P + R YD K K + +G+G+TEK+GG+D+ A T++ + SDG Y L+GH Sbjct: 188 PGLTGRAYDSELKPWQGKAGLTMGMGMTEKQGGSDVRANTTRAEPAGSDGWGARYTLTGH 247 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 KWF S+PM DAF++LAQ + CF +PR+L DGS N + QRLK+K+GN++NA+ E+EF Sbjct: 248 KWFFSAPMCDAFLVLAQTTSGLSCFFLPRILPDGSLNAIRIQRLKDKLGNKANASSEVEF 307 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 +L+G+ + +M + LD A+ + MR +L+ A+++ +R G +LID Sbjct: 308 EGAQAWLVGEEGRGIPQILEMGTMTRLDCALGTSGLMRQALSLALNHTSQRKAFGKLLID 367 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 QP+M+ +AD+AL+ + A + + + EA AR++ PI K+W CK Sbjct: 368 QPLMRNVLADLALE-SEAATALALRLARAFDRAADAHEAVMARLLTPIAKFWICKRGSHF 426 Query: 412 IAEAMECIGGSGYIEERSI---ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 EAMEC+GG+GY+EE + AR YRE P NSI G+GN M LD+L L K Sbjct: 427 AQEAMECLGGNGYVEEGGVGVMARIYREMPLNSIWEGAGNIMALDLLRALRK 478 >gi|160895569|ref|YP_001561151.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160361153|gb|ABX32766.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 564 Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 179/498 (35%), Positives = 268/498 (53%), Gaps = 27/498 (5%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELA AN +TP+LH + G D VEFHP+WH LL GL ++ S R Sbjct: 67 ELAEQANRHTPELHRFDARGRIIDAVEFHPSWHTLLGLYRQQGLISLPFEDS--SAGRWS 124 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 A AA YL Q+E G L ++T+A++ L P + + K+FS EYDP + Sbjct: 125 AW---AAGFYLHGQVEQGTLCPATMTTAAIPLLQKEPALWQQLQGKLFSHEYDPRDLPVG 181 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLA 247 K S+ +G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A Sbjct: 182 DKASMWLGMGMTEKQGGSDVRANTTVAMPVHAGGRGGEYLLRGHKWFFSAPMCDAHLVVA 241 Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 ++ G CF VPR DGS N + QRLK+K+GNRSN++ E+EF + +G L+G+ Sbjct: 242 RMGESGGQACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNSSSEVEFEDAWGILMGEEGRG 301 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +M L+ + S + +R + +A+ YARRR V G +L +QP+M+ +AD+AL+ Sbjct: 302 IPTIIEMATYTRLNCVLGSAAILRSATVQALAYARRRSVFGKLLAEQPLMRTVLADLALE 361 Query: 366 IAAATALSFRLANSFDEAKSRSE--EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA ++ RLA +++ + E A+ RIM P K W CK + EAME +GG+G Sbjct: 362 SEAALQIAMRLAQAYERGGDEGDPLERAWKRIMTPAAKLWVCKRGVELTGEAMEVLGGNG 421 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 Y++ +AR +RE+P NSI GSGN M LDVL + + + + L QDL + Sbjct: 422 YVDTGVMARLFREAPVNSIWEGSGNVMCLDVLRAISREPDGAQLLL----QDLIDTAAGE 477 Query: 484 ITILRDSISLCKEDKG-------LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 +L+ + SL + G AR L + + L + A L R +AD F+ R Sbjct: 478 PALLQQAQSLARRLSGPPDQLEAQARRLVQDLVLLAQACLLRRHAPPAMADGFIATRL-- 535 Query: 537 NCHSTHCMLHGRFNAAHI 554 M+ G F+ A + Sbjct: 536 -GAQQGAMVAGAFDPAGL 552 >gi|123440769|ref|YP_001004761.1| isovaleryl CoA dehydrogenase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087730|emb|CAL10515.1| putative acyl-CoA dehydrogenase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 547 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 178/515 (34%), Positives = 274/515 (53%), Gaps = 15/515 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N Y SD +L A++ ++L +G + S + EL R+AN N Sbjct: 11 LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 70 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ ++ +H W R + RAAR Sbjct: 71 PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + + W P + S YD QK + IG+ Sbjct: 127 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 186 Query: 201 GLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + +++ + + + Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 187 GMTEKQGGSDVLSNSTRAEPLQFRGNGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 246 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GNRSNA+ E+EF N +LLGD + M Sbjct: 247 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 306 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 307 RFDCALGSHGLMRRAFSIALYHAWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 366 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+++ + E ++R++ P KY C + +AEAME +GG GY E+ + R YRE Sbjct: 367 ASAWGKT-GEVHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 425 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLC 494 P NSI GSGN M LDVL K + E L G + + L+ + Sbjct: 426 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIEMLQQEFYSVRGQNRLFDRAWRQLQLRLKNP 485 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R +T+++ A+ L R +AD + Sbjct: 486 KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 518 >gi|115350163|ref|YP_772002.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria AMMD] gi|115280151|gb|ABI85668.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD] Length = 550 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 192/541 (35%), Positives = 292/541 (53%), Gaps = 21/541 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL +L+ G + S +LA AN +TP+L Sbjct: 10 NQFDELVDYNLFATDIALRDALARAGADWAVPQLDAYGARLGSADTAQLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHPAWH LL H+G S+ R P AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPAWHTLLGLYRHEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + K++S +YDP + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWNLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + +M L Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDVL + + + L + L DLG+ ++ + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAEL-TDLGAGEPRIRAALDALRAMLAAPAD 482 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 + AR +++AL + A L R +AD F+ R S+ + G F+ H + Sbjct: 483 TLEASARLFAQRLALVAQACLLRRDAPAAVADAFVATRL---GESSWGRIAGGFD-PHAL 538 Query: 556 D 556 D Sbjct: 539 D 539 >gi|119898590|ref|YP_933803.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119671003|emb|CAL94916.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 547 Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 174/469 (37%), Positives = 254/469 (54%), Gaps = 11/469 (2%) Query: 57 ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116 EL+ +G + L +AN + PQLH + G R D+VE+HPAW AL+R DG+H Sbjct: 41 ELDAIGARLGHAEVLRLGDLANRHPPQLHTHDACGRRVDRVEYHPAWDALMRLLYADGVH 100 Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 CS W EP AH RAA +L Q+EAG L ++T A++ L P +H A Sbjct: 101 CSAWT---EPG--PGAHVARAAAFFLHGQVEAGSLCPATMTFAAIPLLRREPALHAALAA 155 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 ++ + +YD + K SV +G+GLTEK+GG+D+ ++ +Q ++ + G Y L GHKWF S Sbjct: 156 QLGALDYDGRDLPAPSKRSVTVGMGLTEKQGGSDLRSVATQARRAAGGEYLLVGHKWFYS 215 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 P D ++LA+ + CF VPR DG N + QRLK+K+GNRSNA+ E+EF + G Sbjct: 216 VPACDGHLVLARGDDGPACFFVPRWRPDGERNAVRIQRLKDKLGNRSNASGEVEFHDALG 275 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 +G+ + +M LD + S + MR +L EA+H+AR R G LI QP+M+ Sbjct: 276 IPVGEPGRGIAVLIEMAAQTRLDCVLGSAALMRRALVEALHHARHRSAFGHPLIAQPLMR 335 Query: 357 RAIADIALDIAAATALSFRLANSFDE----AKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +AD+AL+ AAT L+ LA D + + A+ R++ P K+W CK A A Sbjct: 336 NVLADLALESEAATLLAIHLAACADAECAGGGTAARGRAWRRVLTPAAKFWICKRAIAFC 395 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFS 470 AE ME GG+GY+E+ + R RE+P NSI GSGN M LD+L L E+ Sbjct: 396 AECMEVCGGNGYVEDGPMPRLLREAPVNSIWEGSGNVMCLDLLRALAREQDAAAALLADL 455 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 D + L +++ ++D LAR ++ + AA L R Sbjct: 456 ADAVDGDRRWRAACEELAATLNAGRDDAWLARRGASRLVVLVQAALLRR 504 >gi|94312747|ref|YP_585956.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93356599|gb|ABF10687.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 548 Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 19/536 (3%) Query: 35 NAYSSDSLLVALIANFPSVVHK-ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93 N Y++D L + + H+ EL G + S +A AN+ P+LH + G R Sbjct: 19 NVYTTDLPLQEAVRRAGAGAHEAELTAYGARLGSAETIRMAEEANHFKPELHTFDRQGRR 78 Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 D+VEFHP+WH ++R + L + +P R A AA + Q+EAG Sbjct: 79 IDRVEFHPSWHGVMRMAREQNLVAQPFA---DP--RPGAWAAYAAGFSMHGQIEAGSQCP 133 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 S+T A + L P + APK++SR YD + QK S+ +G+G+TEK+GG+D+ A Sbjct: 134 NSMTFACIPVLQREPELFAALAPKLYSRTYDARDIPLEQKDSILVGMGMTEKQGGSDVRA 193 Query: 214 ITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 T++ + + G Y ++GHKWF S+PM DA +++A+ E CF VPR DG+ N Sbjct: 194 NTTRAEPLRGEGRGGEYLITGHKWFFSAPMCDAHLVVARTESGPACFYVPRYRPDGTKNA 253 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + QRLK+K+GNRSN++ E+EF +G ++G+ + +M L+ + S +R Sbjct: 254 VQIQRLKDKVGNRSNSSSEVEFRGAWGRMIGEEGRGIPTIIEMATFTRLNCVMGSTGLIR 313 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 L +A+H+ R R G LIDQP+M+ +AD+AL+ AAT + RL +F A + Sbjct: 314 QCLVQALHHTRHRSAFGKTLIDQPLMRNVLADMALESEAATLMMMRLTEAFALADEDPLQ 373 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AY RI+ P K+W K + + EAME GG+GY++E + R YRE+P SI GSGN Sbjct: 374 RAYKRIVTPAAKFWLAKRSVELSGEAMEVFGGNGYMDEGPMGRLYRETPVISIWEGSGNV 433 Query: 450 MVLDVLNLLEKGTN----LFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARF 503 M LD++ + + L E L QD L + ++ LR + + + LAR Sbjct: 434 MALDMIRAISREPQAMQALLEDLTPFCRQDARLSDAATMLVAGLR---TQGEATEWLARR 490 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 + + L A L + D F+ +RF ML A I+D + Sbjct: 491 HAQLLVLLVQARLLGEHAPAAVTDAFIASRFDAQWGRVFGMLPDGVAHAAILDRAW 546 >gi|293604433|ref|ZP_06686840.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292817310|gb|EFF76384.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 561 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 167/444 (37%), Positives = 246/444 (55%), Gaps = 15/444 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P+ + Y +D +L A+ +L G ++ + AN P+L Sbjct: 19 NQVPVLEDYSLYDTDPALREAVRREGGQAWDGDLAAHGAWLGRAQTLAAGQEANRCPPRL 78 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 AY GG R D V+FHPAW+ L+ + GLH W +PV A RAA + Sbjct: 79 VAYDRGGHRIDHVDFHPAWNLLMGGILARGLHSRAWA---QPV--PGAQVARAAAYLMQG 133 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGL 200 Q+EAG L ++T A++ L P D W P ++SRE+DP + K S IG+ Sbjct: 134 QVEAGTLCPTTMTFAAVPLLQREPAGAVDFAGQWLPALYSREFDPADAPLTAKRSALIGM 193 Query: 201 GLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 GLTEK+GG+D+ A++++ G Y L GHKWF S P +DA ++LAQ + + CF Sbjct: 194 GLTEKQGGSDLRAVSTRAAPLGASGRGNAYQLVGHKWFFSVPQADAHLVLAQTDEGLSCF 253 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR + +G N + +RLK+K+GNRSNA+ E+EF N +G ++G+ + +M Sbjct: 254 FVPRWIPEGPRNAIRVRRLKDKLGNRSNASAEVEFENAWGVMVGEPGRGLAVLLEMAATT 313 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD + S + +R ++ +++H+A+ R G LI QP+M+ +AD+AL+ AA L+ RL Sbjct: 314 RLDCVLGSAALLRQAVVQSLHHAQHRQAFGKPLIAQPLMRNVLADLALESEAAMVLALRL 373 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + DE ++ + A R+ P K W CK A IAE ME GG+GY+EE + R YRE Sbjct: 374 ARAVDE-RADASSRALVRVGTPAAKLWICKRAINAIAECMEVWGGNGYVEEGPMPRLYRE 432 Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460 +P NSI GSGN M LDVL L++ Sbjct: 433 APVNSIWEGSGNVMALDVLRALQR 456 >gi|300715049|ref|YP_003739852.1| acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661] gi|299060885|emb|CAX57992.1| Acyl-CoA dehydrogenase domain protein [Erwinia billingiae Eb661] Length = 542 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 181/492 (36%), Positives = 266/492 (54%), Gaps = 15/492 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SDS L A++ L +G+ + S + EL R+AN + P+ Sbjct: 9 FNQPLPLANSNLFLSDSPLRDAVLREGAGWDGDLLASVGQQLGSAESLELGRLANSSPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYL 142 L Y P GER D V FHPAWH L++ + +H W D + E A RAAR L Sbjct: 69 LLRYDPCGERLDDVRFHPAWHLLMQGLTANRVHNLPWLDNAPE-----TAFVARAARFML 123 Query: 143 MAQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 AQ+E+G L ++T ++ L P DW P + S YD K K + IG+G Sbjct: 124 HAQVESGSLCPVTMTFGAIPLLQKHLPAAFADWLPPLLSDRYDAHIKEAPLKRGLLIGMG 183 Query: 202 LTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 +TEK+GGTD+ + T++ + + S Y L+GHKWF S P SDA ++LAQ +G + CF Sbjct: 184 MTEKQGGTDVLSNTTRAEPVASRGSGECYQLTGHKWFFSVPQSDAHLVLAQAKGGLSCFF 243 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PRLL G N + +RLK K+GNRSNA+ E+EF G+L+G+ + M Sbjct: 244 LPRLLPGGEKNAVHIERLKEKLGNRSNASSEVEFLAASGWLIGEEGEGVRQILKMGGYTR 303 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 D A+ S + MR + + A+++A R V G L+DQP+M++ +A AL + TA+ RLA Sbjct: 304 FDCALGSHAMMRRAFSVALYHAHHRQVLGKNLVDQPLMRQLLASQALVLEGQTAMLMRLA 363 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++ ++ + E ++R+ P KY CK +AE+ME +GG GY EE + R YRE Sbjct: 364 RAWSH-QATASETLFSRLFTPAAKYVVCKRGIGFVAESMEVLGGIGYCEESELPRIYREM 422 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKE 496 P NSI GSGN M LDVL +L K + E L + + G + + ++ R ++ K Sbjct: 423 PVNSIWEGSGNVMCLDVLRVLSKQPGVREMLSAEFDAVKGQN-RHFDSLWRQIKLAAGKP 481 Query: 497 DKGLARFLTEKI 508 + AR LTE + Sbjct: 482 QEAQARNLTEGL 493 >gi|115523234|ref|YP_780145.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517181|gb|ABJ05165.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris BisA53] Length = 563 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 177/507 (34%), Positives = 264/507 (52%), Gaps = 13/507 (2%) Query: 35 NAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93 N ++ D++L A+ +L G S +EL +AN P+L + G R Sbjct: 35 NMFTQDAVLQEAVQREAAGWAEADLTSFGALTGSAGYRELGTLANRVLPELETHDRFGNR 94 Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 D+V FHPA+H L+ + GLH S W AH RAA Y+ +Q+EAGH Sbjct: 95 IDQVNFHPAYHQLMAVAYQHGLHSSSWTNP-----GPGAHVARAAHFYMQSQIEAGHGCP 149 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 S+T A++ AL TP + K + PKI +R+YD N K ++ IG+ +TEK+GG+D+ + Sbjct: 150 VSMTHAAIPALRATPDLAKMFEPKITARDYDMRNVPDRDKQALVIGMAMTEKQGGSDVRS 209 Query: 214 ITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 +++ G + +Y L GHK+F+S+PMSD F+ LA + CFL+PR DG+ N Sbjct: 210 NSTRAFPVGAEGEGQLYELVGHKYFVSAPMSDLFLTLAHTRNGLTCFLMPRWRPDGTKNP 269 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 L RLK K+GN SNA+ E E +++G + DM + D I S +G R Sbjct: 270 LQVIRLKRKMGNASNASSETELRGALAWMVGPEGKGIRTIIDMVAMTRFDCMIGSSAGQR 329 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 ++ + AIH+ +R G LIDQP+M+ +AD+AL+ A+ L+ R+ + D R EE Sbjct: 330 MATSLAIHHCAQRAAFGKQLIDQPLMQNVLADLALEAEASLTLTMRIGRALDNRGDRHEE 389 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 R KYW CK P EAMECIGGSG +E+ R +RESP N+I GS N Sbjct: 390 -LLMRFGTAAGKYWICKRTPNHAYEAMECIGGSGVMEDSPFPRLFRESPINAIWEGSSNV 448 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEK 507 LDVL L K + F+ + + G + K + + L S + + +R L ++ Sbjct: 449 QCLDVLRALGKQPEGLQVFFAEVAKAKGGNAKLDRWVAELGKEFSDLADLEFRSRALVDR 508 Query: 508 IALASSAAALYRAGMNDIADVFLENRF 534 +ALA A L + ++D F +R Sbjct: 509 MALALQGALLVQHAPAFVSDAFCASRL 535 >gi|83950362|ref|ZP_00959095.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM] gi|83838261|gb|EAP77557.1| putative acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM] Length = 540 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 174/458 (37%), Positives = 252/458 (55%), Gaps = 19/458 (4%) Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 PQ + GG R D+V FHP++H LL I G W+ R H AA +Y Sbjct: 72 PQARIFDAGGRRLDEVRFHPSYHQLLEAGIGAGYAALPWEG------RPGGHATHAAMVY 125 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 L +Q+E G ++T A++ AL + + + W PK+ SR YD K +K +G+ Sbjct: 126 LTSQVEPGICCPMTMTYAAVPALRSDATLLRTWVPKLTSRVYDGAAKPLARKPGATMGMA 185 Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TEK+GG+D+ A ++ +++G +Y L GHKWF S+PMSD F+MLAQ G + CFLVPR Sbjct: 186 MTEKQGGSDVRANATR--AVAEGEMYRLRGHKWFCSAPMSDGFLMLAQAPGGLSCFLVPR 243 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 L++ NG+ QRLK+K+GN +NA+ E+E + +G LLG+ + DM LD+ Sbjct: 244 WLDE-RRNGIHLQRLKSKLGNHANASAEIELVDAYGHLLGEEGDGVRVILDMVHHTRLDT 302 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A+ MR +L A H+AR R V G L DQP+M+ +AD+ALD AL + +F Sbjct: 303 ALAPAGLMRAALDHAWHWARHRQVFGRGLADQPLMRTVLADLALDWEGTLALGLHMGAAF 362 Query: 381 DEAKSRSEEA--AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D R +EA A+AR+ + KY K+ P V+ EAME +GG GY+E+ + YRE+P Sbjct: 363 D----RDDEASRAFARLGVALAKYLGNKLCPGVVYEAMEALGGMGYVEDTELPMLYREAP 418 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE-- 496 NSI GSGN + LDVL L+K E L + L + G S + LR + Sbjct: 419 LNSIWEGSGNVICLDVLRSLQKLPLAGEVLSAELSEATGQS-RAYDMALRTHMERFTRLP 477 Query: 497 DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 D+G AR+ E +A +A+ L R I+D + R Sbjct: 478 DEGEARWYVESLATLLTASVLIRQAPGPISDAYCATRL 515 >gi|241767839|ref|ZP_04765422.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241361084|gb|EER57774.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 439 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 160/405 (39%), Positives = 230/405 (56%), Gaps = 15/405 (3%) Query: 58 LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117 L GE + LA AN +TP LH++ G R D VEFHP+WHAL+ GL Sbjct: 43 LTAYGERLGCADTWHLAEQANRHTPVLHSFDARGRRADAVEFHPSWHALMALYRAQGLIA 102 Query: 118 SIWDRSFEPVVRKQAHKIRA--ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175 P A + A A YL Q+E G L ++T+AS+ L P + Sbjct: 103 -------HPFQSNDAGRWTAWAAGFYLHGQVEQGTLCPATMTTASIPVLQKEPALWAQLQ 155 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGH 231 +FS +YD + QK S+ +G+G+TEK+GG+D+ A T+ + G Y L GH Sbjct: 156 TPLFSSDYDARDVPLAQKRSIWLGMGMTEKQGGSDVRANTTLATPLGAGGRGGEYLLRGH 215 Query: 232 KWFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 KWF S+PM DA +++A+ EG CF VPR DGS N + QRLK+K+GNRSN++ E+E Sbjct: 216 KWFFSAPMCDAHLVVARTAEGGHACFFVPRWCPDGSKNAVHVQRLKDKVGNRSNSSSEVE 275 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 F + +G L+G+ + +M L+ I S + +R + +A+ YARRR G L Sbjct: 276 FEDAWGILMGEEGRGIPTIIEMAATTRLNCVIGSAAMLRQATVQALAYARRREAFGKRLA 335 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 +QP+M+ +AD+AL+ AA L+ RLA +F+ S ++ A+ R+M P K+W CK A Sbjct: 336 EQPLMRTVLADLALESEAALVLAMRLAEAFERDNSPAQR-AWKRVMTPAAKFWICKRAVE 394 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + EAME +GG+GY++ +AR +RE+P NSI GSGN M LDVL Sbjct: 395 LTGEAMEVLGGNGYVDSSVVARLFREAPVNSIWEGSGNVMCLDVL 439 >gi|311105191|ref|YP_003978044.1| protein AidB [Achromobacter xylosoxidans A8] gi|310759880|gb|ADP15329.1| protein AidB [Achromobacter xylosoxidans A8] Length = 553 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 181/520 (34%), Positives = 267/520 (51%), Gaps = 17/520 (3%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P + Y +D +L A+ +L G ++ E AN P+L Sbjct: 11 NQVPPLEDYSLYETDPALREAVRREGAQAWVSDLAAHGAWLGRAQTLEAGAQANRCPPRL 70 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +Y GG R D+VEFHP+W+ L+ + GLH W + EP A RAA + Sbjct: 71 ISYDRGGHRIDRVEFHPSWNLLMGGIMARGLHSRAWAQP-EP----GAQVARAAAYVMQG 125 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKD----WAPKIFSREYDPTNKAPMQKTSVAIGL 200 Q+EAG L ++T A++ L P D W ++SRE+D + K S IG+ Sbjct: 126 QVEAGTLCPTTMTFAAVPLLQREPPGVVDFGGQWLNALYSREFDGADAPLAAKRSALIGM 185 Query: 201 GLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 GLTEK+GG+D+ A+T++ + Y L GHKWF S P +DA ++LAQ + + CF Sbjct: 186 GLTEKQGGSDLRAVTTRATPVGAAGRGRAYLLVGHKWFFSVPQADAHLVLAQTDEGLSCF 245 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VPR + DG N + +RLK+K+GNRSNA+ E+EF + +G ++G+ + +M Sbjct: 246 FVPRWIPDGPRNAVRVRRLKDKLGNRSNASAEVEFEDAWGVMVGEPGRGLTVLLEMAATT 305 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD + S + +R +L +++H+AR R G LIDQP+M+ + D+AL+ AA AL RL Sbjct: 306 RLDCVLGSAALLRQALVQSVHHARHRRAFGKPLIDQPLMRNVLVDLALESEAAMALGLRL 365 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + DE ++ + A R+ P K W CK A A +AE ME GG+GY+++ + R YRE Sbjct: 366 ARAVDE-RADASARALVRVGTPAAKLWVCKRAIAAVAECMEVCGGNGYVDDGPMPRLYRE 424 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 +P NSI GSGN M LDVL L++ L Q G + R L E Sbjct: 425 TPVNSIWEGSGNVMALDVLRALQREAAALPALEREFGQATGQYQDFDDALTRWRALLADE 484 Query: 497 DKG--LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + AR + +A AA L + +A F +R Sbjct: 485 AQAEFQARRIAAGLARLWQAALLIQHAPAPVAQAFAASRL 524 >gi|322831165|ref|YP_004211192.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp. Y9602] gi|321166366|gb|ADW72065.1| acyl-CoA dehydrogenase domain-containing protein [Rahnella sp. Y9602] Length = 543 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 175/461 (37%), Positives = 251/461 (54%), Gaps = 11/461 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD+ L ++ + + L LG+ + S + EL R+AN N P Sbjct: 9 FNQPKPLSNSNLFLSDTPLREAVSRQQAGWDADVLASLGQQLGSAESLELGRLANTNPPD 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y GER D V FHPAWH L++ I + +H W R + RAAR L Sbjct: 69 LLRYDTTGERLDDVRFHPAWHLLMQGLIANRVHNLPWQED----ARIGSVVARAARFILH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q+EAG L ++T ++ L P W + S YDP ++ QK V IG+G+ Sbjct: 125 GQVEAGTLCPVTMTFGAIPLLQKYLPPEFSGWMKPLLSDRYDPHLQSGDQKKGVLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ + T++ + S Y L GHKWF S P SDA ++LAQ +G + CF + Sbjct: 185 TEKQGGSDVLSNTTRATALEGRGSGKPYHLVGHKWFFSVPQSDAHLVLAQTDGGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + +RLK+K+GNRSNA+ E+EF N G+LLG+ + M Sbjct: 245 PRVLPDGTRNAIRIERLKDKLGNRSNASSEVEFQNATGWLLGEEGEGVRHILKMGGHTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S + MR +L+ A+++A +R V G LI+QP+M++ ++ +AL + T L RLA Sbjct: 305 DCALGSHAMMRRALSVALYHAFQRQVFGKPLIEQPLMRQTLSRMALLLEGQTMLLMRLAA 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D A+ E R+M P K+ C+ +AEAME +GG GY E+ + R YRE P Sbjct: 365 ASD-AQDNPAEKLLCRLMTPAAKFEVCRQGMPFVAEAMEVLGGIGYCEDSELPRLYREMP 423 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 NSI GSGN M LDVL L+K E + L Q G + Sbjct: 424 VNSIWEGSGNVMCLDVLRTLKKLPASAEMVQQILHQARGQN 464 >gi|260425854|ref|ZP_05779833.1| protein AidB [Citreicella sp. SE45] gi|260420346|gb|EEX13597.1| protein AidB [Citreicella sp. SE45] Length = 544 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 189/538 (35%), Positives = 279/538 (51%), Gaps = 19/538 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQEL---ARMANYNTP 82 NQPP ++ D L +A + EL Y L+ +E+ AR AN N P Sbjct: 17 NQPPGRGDLDLVGGDRPLQDGLAGLDAGRSAEL---AAYGLALGREEMRWAARDANRNPP 73 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L Y GG R D++ FHPA+H + SI G H W+ + H AA +YL Sbjct: 74 ELQGYDRGGRRLDELRFHPAYHLFMELSISAGYHALPWE------GQGGGHLAHAAMVYL 127 Query: 143 MAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 +Q+E GH ++T A + A+ V + W + SR YDP+ + QK+ +G+ Sbjct: 128 ASQVEPGHCCPLTMTYAGIAAISDQHGAVAQRWCKALMSRHYDPSVRELSQKSGATLGMA 187 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTEK+GG+D+ + + + D ++ L+GHKWF S+PMSD F+ LAQ + CFLVPR Sbjct: 188 LTEKQGGSDVRSNATIAEPDGD-VWRLTGHKWFCSAPMSDGFLTLAQGPEGLSCFLVPRW 246 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 LE G NG+ RLK+K+GNRSN + E+E+ + LG + +M LD+A Sbjct: 247 LEGGR-NGIRIARLKDKLGNRSNGSSEIEYERALAWPLGAPGAGVRTIIEMIHHTRLDTA 305 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + MR +LAEA H+ R LIDQP+M+ +AD+ALD+ + AL R+A +FD Sbjct: 306 MAPAGLMRAALAEAHHWVSHRSAFQRRLIDQPLMRTVLADLALDLEGSLALGLRVAGAFD 365 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + + A+ARI + KY K+ P V+ EAME +GG+GY+E+ + YRE+P N Sbjct: 366 --GTGEADRAFARIGVALAKYLSNKLCPVVVCEAMEILGGAGYVEDGPLPMLYREAPLNG 423 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGL 500 I GSGN + LDVL L + E L + +SG+ + ++ Sbjct: 424 IWEGSGNVICLDVLRTLTRDPAAREVLMAEFSDASAASGRFASALSAHQTRWPGLPEEAE 483 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 AR E+ AL +AAAL R +IA+ F++ R L T + +A +ID L Sbjct: 484 ARAFVERTALLLAAAALLRTVPAEIAEAFIDTRLLSPRGRTPGAIPA-MDAGALIDRL 540 >gi|34499591|ref|NP_903806.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34105442|gb|AAQ61797.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 547 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 180/484 (37%), Positives = 261/484 (53%), Gaps = 18/484 (3%) Query: 62 GEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121 GE + ELA AN PQL A+ G R D+V+FHP+WH LL GL +D Sbjct: 47 GERLGRAETFELAAQANRFAPQLQAFDRRGRRIDRVDFHPSWHDLLALYRSQGLVSLPFD 106 Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181 R A YL Q+EAG L ++T A++ L P + K+ SR Sbjct: 107 SE-----RPGRWAAFLAGFYLHGQVEAGTLCPATMTQAAIPLLKREPALWAQLGDKLLSR 161 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSS 237 E+D + +KT++ +G+G+TEK+GG+D+ + TS G G Y L GHKWF S+ Sbjct: 162 EHDARDLPAERKTAIWLGMGMTEKQGGSDVRSNTSTATPTGAGGRGGEYTLRGHKWFFSA 221 Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 PMSDA +++AQ+ +G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G Sbjct: 222 PMSDAHLVVAQLRDGGPSCFYVPRWRPDGSRNAVAIQRLKDKVGNRSNASSEVEFHDAWG 281 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+G+ + +M L I S + +R L +AI YARRR G L +QP+M+ Sbjct: 282 VLIGEPGRGIPTIIEMATYTRLSCVIGSAALIRQGLVQAIAYARRRVAFGKRLAEQPLMR 341 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+AL+ AA L+ RLA F+ ++E A+ RI+ P K+W CK A + E M Sbjct: 342 GVLADLALESEAALCLAARLAEGFE-----NDEPAWKRIVTPAAKFWVCKRAVEAVGETM 396 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 E GG+GY+++ +AR +RE+P NSI GSGN M LDV+ L++ +++L L Sbjct: 397 EVFGGNGYVDDGPMARLFREAPVNSIWEGSGNVMCLDVMRALQREPEAWQRLQQELAALA 456 Query: 477 GSSGK--KVITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 G + + LR SL +GL R +++AL L +AD F+ +R Sbjct: 457 GGDRRLSAALADLRSMASLSPPQLEGLGRRFAQQLALTVQGCLLRGRAPAAVADGFIASR 516 Query: 534 FLDN 537 D Sbjct: 517 LADG 520 >gi|120608852|ref|YP_968530.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120587316|gb|ABM30756.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 555 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 180/495 (36%), Positives = 264/495 (53%), Gaps = 22/495 (4%) Query: 58 LELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114 L LG+Y S LA +AN +TP LH + G R D+VEFHPAW AL+ +G Sbjct: 40 LPALGDYARRLGSAGTHALAELANRHTPILHRFDSRGRRADRVEFHPAWDALMALYRGEG 99 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174 L +D R AA YL Q+E G L ++T A++ L P + Sbjct: 100 LVSMPFDSD-----RPGRWSAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWARL 154 Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSG 230 ++ SR +DP +K + +G+G+TEK+GG+D+ A T+ G G Y L G Sbjct: 155 GDRLHSRTHDPREAPAHEKAGIWLGMGMTEKQGGSDVRANTTVATPLGAGGRGGEYRLRG 214 Query: 231 HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 HKWF S+P SDA +++A+ G CF VPR L+DG+ NG+ QRLK+K+GNRSNA+ E Sbjct: 215 HKWFFSTPQSDAHLVVARTGEGGPFACFYVPRRLQDGTLNGVHVQRLKDKVGNRSNASAE 274 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 +EF + +G L+G+ + +M L+ S + +R + +AI YARRRH G Sbjct: 275 VEFHDAWGVLMGEEGRGIPTIIEMATYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKA 334 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCC 405 L +QP+M+ +AD+AL+ AA AL RLA +F+ + + + A+ R+M P K+W C Sbjct: 335 LAEQPLMRTVLADLALESEAALALLMRLAEAFERDADGTATPADRAWKRVMTPAAKFWVC 394 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 K + EAME GG+GY++E +AR + E+P NSI GSGN M LDVL L + T Sbjct: 395 KRGVEMAGEAMEVFGGNGYVQEGVMARLFLEAPVNSIWEGSGNVMCLDVLRALARDTEAA 454 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLC----KEDKGLARFLTEKIALASSAAALYRAG 521 L ++ LR+ +L +E +G+ R +++ LA+ A L R Sbjct: 455 HALLEEF-APAAQGEPRIGATLRELQALLALPPQELEGMGRLAAQRLVLAAQACLLRRHA 513 Query: 522 MNDIADVFLENRFLD 536 +AD F+ R D Sbjct: 514 PAAVADAFIATRLGD 528 >gi|167834966|ref|ZP_02461849.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis MSMB43] Length = 564 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 170/519 (32%), Positives = 266/519 (51%), Gaps = 13/519 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ +G NA+ D L ++ F LG + AQ+ AR+AN TP L Sbjct: 25 FNQAADPVGYNAFDDDVALSSITERFAPWAAGHASRLGALAGTAQAQDAARLANLYTPVL 84 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D VEFHPAWH L+ + + +H W + EP H RA + YL Sbjct: 85 KNFDRYGNRLDWVEFHPAWHQLMSWAFGNQVHSLAWTAT-EP----NGHFARAVQSYLWN 139 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E G + AS+ P + W K +YDP QKT I +TE Sbjct: 140 QIENGVGCPTGMAYASVAGFRRYPEL-AAWKEKTLQTQYDPRRLPIEQKTHAVIAYAMTE 198 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 K+GG+D+ + +G IY ++GHKWF S P++D LA+ + V CF +PR Sbjct: 199 KQGGSDLRETQTFAVPHENGEHGAIYLVTGHKWFCSVPVADGIYTLARTQAGVSCFFMPR 258 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 +L DG+ N + QRLK+K GN+SNA+ E+E+ N + L+G+ + L LD Sbjct: 259 ILPDGTTNRIFIQRLKDKAGNKSNASSEIEYRNAWAILVGEEGRGIREILSHAHLTRLDF 318 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A+ S MR +L A+++A+ R G L +QP+ + +AD+A+D A+ ++ R++ + Sbjct: 319 AVGSAGLMRHALTLALNHAQTRTAFGKPLAEQPIQEAVLADLAIDAEASMLMALRVSRAT 378 Query: 381 DEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D ++ + E A ARI P+ K+W C+ A + + EA+E GG+G+IEE +AR YRE+P Sbjct: 379 DGWEAGNAAEKALARIATPVAKFWNCRRAASFVVEALEVHGGNGFIEENPMARLYREAPL 438 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497 N+I G+ N M +DV+ +++ + L G++ + +L+ ++ E Sbjct: 439 NAIWEGTSNMMCMDVMRAMKREPQTLDALLDDFAGLAGANRFFDAHLGVLKATLDEGAEI 498 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 +G AR + +ALA A L R ++AD F +R D Sbjct: 499 EGNARRIASLMALALQGAELLRHSTAEVADAFCASRLHD 537 >gi|289675783|ref|ZP_06496673.1| putative acyl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5] Length = 384 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 154/382 (40%), Positives = 216/382 (56%), Gaps = 10/382 (2%) Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154 D VEFHPA+H L+ +I G+ W + AH RAA YL Q + G Sbjct: 2 DLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHTQADPGSGCPL 56 Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TEK+GGTD+ A Sbjct: 57 TMTFASVPALRLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTEKQGGTDVRAN 116 Query: 215 TSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270 T++ + G Y L GHKWF S+PM DAF+ LAQ + + CFL+PR D + N Sbjct: 117 TTRAFPVGAGSPGQAYELVGHKWFCSAPMCDAFLTLAQTDKGLSCFLLPRHRPDDTRNEF 176 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 QRLKNK+GN SNA+ E+EF +++G+ + +M + D I S + MR Sbjct: 177 YIQRLKNKLGNWSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQ 236 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L +A H+ R VSG +L +QP+M+ +AD+AL+ AA AL+ R+ + D + E Sbjct: 237 ALTQATHHCAHRAVSGRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHEK 295 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P NS GSGN Sbjct: 296 RFVRLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQ 355 Query: 451 VLDVLNLLEKGTNLFEQLFSTL 472 LDVL L K + LF L Sbjct: 356 CLDVLRTLSKEPGALDALFDEL 377 >gi|121609177|ref|YP_996984.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553817|gb|ABM57966.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 568 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 183/528 (34%), Positives = 260/528 (49%), Gaps = 18/528 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQ G +A+ D++L + I LG V QELAR+AN +TP+L Sbjct: 24 NQAQPASGYDAFGGDAVLRSAIEREAPWAASRCAALGAVVGDENVQELARLANRHTPELK 83 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D VEFHP+WHAL+ + + W R+ E K H RA YL Q Sbjct: 84 THDRFGNRIDWVEFHPSWHALMSLAWQHEVPNLTW-RTTE----KGGHFARAVLSYLWNQ 138 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E G + AS P + W K Y+ + + K +V IG +TEK Sbjct: 139 VEQGTACPTGMAYASHAGFEAEPAL-AIWKEKSKGTTYEFSRREVGDKPAVVIGYAMTEK 197 Query: 206 RGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 +GG+D+ + + G Y L+GHKWF S P SD F LA+V G V CF Sbjct: 198 QGGSDLRQTRTTARFSHSGDYHGAMAHWYELTGHKWFCSVPQSDGFFTLAKVNGGVTCFF 257 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR L DGS N QRLK+K GN SNA+ E+E++ T +G+ + L Sbjct: 258 LPRTLPDGSYNRFFVQRLKDKAGNESNASSEVEYAGTLAIRVGEEGRGIREILSHAHLTR 317 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 LD A+ S MR +L A+ + R G L D+P+M +AD+A+++ AAT ++ R+A Sbjct: 318 LDFAVGSAGLMRQALTLALRHTTTRSAFGTPLADRPMMSNVLADMAVEVEAATLMALRVA 377 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D E ARI P K++ C AP++ EA++C GG+G+IEE +AR YRE+ Sbjct: 378 KATDLMACSEHEKLLARIATPAAKFFNCSRAPSIAYEALQCHGGNGFIEENPMARLYREA 437 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE- 496 P NS+ G+ N M +DV + K E LF L Q L + + +R + L E Sbjct: 438 PLNSVWEGTANMMCMDVRRAMTKDPRTVEALFDEL-QPLANQDARFDVQVRHTKRLVHEA 496 Query: 497 --DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTH 542 D+ LAR +TE +A A L R ++ADVFL R +H Sbjct: 497 VKDEFLARPMTEAVARVLQGAELIRHSSREVADVFLGTRSPGGSWGSH 544 >gi|326436924|gb|EGD82494.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 706 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 184/531 (34%), Positives = 283/531 (53%), Gaps = 20/531 (3%) Query: 18 PSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARM 76 P LNQ P A+ SD +L + ++ + + E + +G+ S ELAR Sbjct: 28 PPPQSRVLNQVPALENFAAFESDPILQSCVSFYGADFGTEQISYVGKLAGSQHVAELARD 87 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN N P H++ G R D V++HPA+H +++ G+ I S+ ++ + R Sbjct: 88 ANENIPVFHSHDRFGNRIDFVKYHPAYHEIMKL----GIEAEIPSYSWRNADKRGSAVAR 143 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVAL--MTTP-RVHKDWAPKIFSREYDPTNKAPMQK 193 +A YLM Q E+G ++T A + AL MT R D+ K + EYDP N +K Sbjct: 144 SALGYLMYQAESGTQCPQTMTYACVPALKHMTDEQRSVCDFLTKAITPEYDPRNVPATEK 203 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKIS------DGIYCLSGHKWFLSSPMSDAFIMLA 247 + IG+ +TEK+GG+D+ A + + + Y L+GHKWF S+PM DAF+ LA Sbjct: 204 NGITIGMSMTEKQGGSDVRANITTAKPVDANKTGPGSAYFLNGHKWFTSAPMCDAFLTLA 263 Query: 248 QVEGRVGCFLVPRLLED-GSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 Q E + CF+VPR + G N GL +QRLK+K+G+RSNA+ E+E+ N + LLG Sbjct: 264 QTENGLSCFIVPRWVPSTGERNEGLRFQRLKSKVGDRSNASSEVEYHNAYAELLGPEGRG 323 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +M LD + + M+ +L EA+++ R G +L+D P+M+ +AD+ ++ Sbjct: 324 IAIILEMVQNTRLDCLVGTAGLMKRALFEAVNHTSHRSAFGSVLLDTPLMRAVVADLTIE 383 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AATAL+FR+A++FD A++ + A RI I KY CK AP + EAME +GG+GY+ Sbjct: 384 SEAATALAFRIASTFD-AQASEYDKALGRIATAIAKYHICKRAPQFVYEAMESLGGNGYV 442 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKKV 483 +E + R YR++P N+I GSGN + LDVL + + E L L + G+K Sbjct: 443 DEGPMGRLYRQAPLNAIWEGSGNVICLDVLRCFHREPDAVEALMHELSSLGHVEEYGRK- 501 Query: 484 ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 L+ I +++G R + AL A AL R + D FL+ R Sbjct: 502 FNKLKAEIENIGQNQGRLRNIVGTAALLLQAVALSRTSTEAVVDAFLKTRL 552 >gi|317493578|ref|ZP_07951999.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918521|gb|EFV39859.1| acyl-CoA dehydrogenase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 544 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 182/530 (34%), Positives = 271/530 (51%), Gaps = 26/530 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQP N Y SD+ L + A + S + L +G + S + EL RMAN N Sbjct: 9 FNQPNPLSNSNLYLSDTPLQEAVVREQAGWDSAL---LSAVGLQLGSAESLELGRMANAN 65 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L Y G R D+V FHP+WH L++ + +H W + + RAAR Sbjct: 66 PPELLRYDAAGRRVDEVRFHPSWHMLMQGLTENRVHNLPWQNN----AVSGSFAARAARF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 L +Q+EAG L ++T ++ L P W + S YDP + QK + IG Sbjct: 122 LLHSQIEAGTLCPITMTFGAIPLLQKCLPTSMNGWLMGLASNRYDPHSLPAEQKKGLLIG 181 Query: 200 LGLTEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 +G+TEK+GG+D+ T+Q + S Y + GHKWF S P SDA ++LAQ G + C Sbjct: 182 MGMTEKQGGSDVLTNTTQAIALEGQGSGKPYRIVGHKWFFSVPQSDAHLILAQASGGISC 241 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F VPR+L DG+ N + +RLK K+GNRSNA+ E+EF + G+LLGD + M Sbjct: 242 FFVPRILPDGTRNAIRIERLKEKLGNRSNASAEVEFQDATGWLLGDEGDGVRLILQMGSA 301 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 D A+ S MR + A ++A +R G L +QP+M++ A + L + T+L FR Sbjct: 302 TRFDCALGSHGLMRRAFTVAFYHALQRQAFGKSLAEQPLMRQVFAKMTLRLEGQTSLLFR 361 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 L S + + E + R+M P K+ CK +AEAME +GG GY EE + R YR Sbjct: 362 LCRSLEMPDVQGER-LFGRLMTPAAKFAVCKQGIPFVAEAMEALGGIGYCEESELPRLYR 420 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS-LC 494 E P NSI GSGN M LDVL + K ++ E++ S D+ + R+ + L Sbjct: 421 EIPVNSIWEGSGNIMCLDVLRVWRKNPHM-EEMLSLELADVKGQNVLLDKAWRNLLKRLH 479 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN-------RFLDN 537 + AR +++++ ++AA L R ++A+ + + R +DN Sbjct: 480 NPSEAEARIISDELFNINAAAQLLRFAPTEVAEAWCQQYHSSDGARVIDN 529 >gi|238764702|ref|ZP_04625646.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC 33638] gi|238697098|gb|EEP89871.1| hypothetical protein ykris0001_15000 [Yersinia kristensenii ATCC 33638] Length = 557 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 175/519 (33%), Positives = 276/519 (53%), Gaps = 23/519 (4%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N + SD +L A+ ++L +G + S + EL R+AN N Sbjct: 21 LVFNQPEPLSNSNLFLSDMALREAVTRQQAGWDGEDLSRIGLQLGSQESLELGRLANANP 80 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ + +H W R+ + RAAR Sbjct: 81 PELLRYDAAGQRLDQVRFHPAWYVLMQELVSHRVHNLPWQED----ARRGSFVARAARFI 136 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + + W P + S YD QK + IG+ Sbjct: 137 LHAQVEAGTLCPITMTFGAIPLLQQTLPSLFQSWLPPLLSDRYDSHQTVGDQKRGLLIGM 196 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + T++ + + Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 197 GMTEKQGGSDVLSNTTRAEPLEVRGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 256 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GNRSNA+ E+EF + +LLG+ + M Sbjct: 257 FLPKILPDGTYNAIRLERLKEKLGNRSNASSEVEFDHATAWLLGEEGDGIRQILKMGGYT 316 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++A +R G L++QP+M++ ++ +AL + TAL RL Sbjct: 317 RFDCALGSHGLMRRAFSVALYHAWQRQAFGKALVEQPLMRQVLSRMALRLEGHTALLMRL 376 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+++ + E ++R++ P KY C + +AEAME +GG GY E+ + R YRE Sbjct: 377 ASAWGKP-GEVHEQIFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 435 Query: 437 SPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLEQD---LGSSGKKVITILRDS 490 P NSI GSGN M LDVL K ++ +Q F + S +++ L++ Sbjct: 436 MPVNSIWEGSGNIMCLDVLRTFRKLPSAIDVLQQEFYPVRGQNRLFDRSWRQLQQRLKNP 495 Query: 491 ISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 KE++G R +T+++ A+ L R +AD + Sbjct: 496 ----KEEQG--RAITQQLFDLCCASQLLRFASPPLADAW 528 >gi|213163310|ref|ZP_03349020.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 424 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 161/420 (38%), Positives = 239/420 (56%), Gaps = 7/420 (1%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ + T+ ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFL 244 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG N + +RLK+K+GNRSNA+ E+EF +T G+ L + + M + LD A+ Sbjct: 245 PDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRLREEGEGIRHILKMGGMTRLDCAL 304 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR + + AI++A +R G LI+QP+M++ ++ +AL + TAL FRLA ++ E Sbjct: 305 GSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-E 363 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NSI Sbjct: 364 QRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSI 423 >gi|85706346|ref|ZP_01037440.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217] gi|85669119|gb|EAQ23986.1| putative acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 542 Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 168/467 (35%), Positives = 250/467 (53%), Gaps = 11/467 (2%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 +E R AN + P+L + GG R D+V FHPA+H L+R I G W+ + + Sbjct: 61 REAGRAANRHPPELVLFDAGGRRLDEVRFHPAYHDLMRVGIGAGYAALAWEGA------R 114 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 H AA +Y+ +Q+E G ++T A++ AL + DW PK+ +R YDP K Sbjct: 115 GGHASHAAMVYMTSQVEPGVCCPMTMTYAAVPALRVDKALLADWVPKLTARTYDPGAKPL 174 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 +K +G+ +TEK+GG+DI A + D Y L GHKWF S+PMSD F+ LAQ Sbjct: 175 ARKPGATLGMAMTEKQGGSDIRATATTATPEGD-TYRLVGHKWFCSAPMSDGFLTLAQAP 233 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + CFLVPR LE G NG+ QRLK+K+GNR+NA+ E+E+ + LGD + + Sbjct: 234 EGLTCFLVPRWLEGGR-NGIQIQRLKDKLGNRANASAEIEYHGAIAYRLGDESAGLRTIL 292 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +M LD+A+ MR +L +A ++A R LIDQP+M+ +AD+ALD Sbjct: 293 EMVHHTRLDTAMAPAGLMRAALDQAQYWACHRSAFQKRLIDQPLMRAVLADLALDWEGTL 352 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL +A +FD + + A+AR+ + K+ K+ P V+ EAME +GG GY+E+ + Sbjct: 353 ALGLHVARAFD--GRGAADRAFARLGVALAKFMGNKLCPCVVYEAMEAMGGMGYVEDTPL 410 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDS 490 YRE+P NSI GSGN + LD+L L K E L + L G + + Sbjct: 411 PMLYREAPLNSIWEGSGNVICLDILRTLRKEPLAGEVLSAELASVAGQDSRFDAALKAHM 470 Query: 491 ISLCK-EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLD 536 + K D+ AR+ E +A +A+ L R + +A ++ R D Sbjct: 471 QTFPKLPDEAQARWYAESLATLLTASVLMRHAPDAVASAYIATRLSD 517 >gi|318607410|emb|CBY28908.1| alkylation response protein AidB, acyl-CoA dehydrogenase family [Yersinia enterocolitica subsp. palearctica Y11] Length = 435 Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 160/434 (36%), Positives = 241/434 (55%), Gaps = 11/434 (2%) Query: 23 FALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 NQP N Y SD +L A++ ++L +G + S + EL R+AN N Sbjct: 7 LVFNQPEPLSNSNLYLSDMALREAVMREHAGWDGEDLSRIGLQLGSQESLELGRLANANP 66 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+L Y G+R D+V FHPAW+ L++ ++ +H W R + RAAR Sbjct: 67 PELLRYDAAGQRLDQVRFHPAWYVLMQELVNHRVHNLPWQED----ARIGSFVARAARFI 122 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L AQ+EAG L ++T ++ L T P + + W P + S YD QK + IG+ Sbjct: 123 LHAQVEAGTLCPITMTFGAIPLLQQTLPPLFQSWIPALLSDRYDSHQIVGSQKRGLLIGM 182 Query: 201 GLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 G+TEK+GG+D+ + +++ + ++ Y L GHKWF S P SDA ++LAQ EG + CF Sbjct: 183 GMTEKQGGSDVLSNSTRAEPLTVHGHGEAYRLVGHKWFFSVPQSDAHLVLAQAEGGLSCF 242 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +P++L DG+ N + +RLK K+GNRSNA+ E+EF N +LLGD + M Sbjct: 243 FLPKMLPDGTYNAIRLERLKEKLGNRSNASSEVEFDNATAWLLGDEGDGIRQILKMGGYT 302 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 D A+ S MR + + A+++ +R G L+DQP+M++ ++ +AL + TAL RL Sbjct: 303 RFDCALGSHGLMRRAFSIALYHTWQRQAFGKALVDQPLMRQVLSRMALRLEGHTALLMRL 362 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 AN++ E + E ++R++ P KY C + +AEAME +GG GY E+ + R YRE Sbjct: 363 ANAW-EKPGEAHEQVFSRLLTPAAKYRVCGLGSGFVAEAMEVLGGIGYCEQSELPRIYRE 421 Query: 437 SPANSILLGSGNAM 450 P NSI GSGN M Sbjct: 422 MPVNSIWEGSGNIM 435 >gi|325519771|gb|EGC99075.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. TJI49] Length = 424 Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 163/430 (37%), Positives = 243/430 (56%), Gaps = 20/430 (4%) Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 S LA AN + P+ + + G R D+VEFHPAWHALL GL+ ++ F Sbjct: 1 SAETARLADEANRHPPEPNIFDRRGRRIDRVEFHPAWHALL------GLYR---NQGFVS 51 Query: 127 VVRKQAHKIR----AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182 + + A R AA YL Q+EAG L ++T A++ L P + +++S + Sbjct: 52 LAFRDARPGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWALLRDRLYSDD 111 Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSP 238 YDP + K S+ G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+P Sbjct: 112 YDPRDVPIADKRSIWFGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHKWFFSAP 171 Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 M DA +++A+ E G CF VPR DG+ N + QRLKNK+GNRSN++ E+E ++ +G Sbjct: 172 MCDAHLVVARTEAGSPSCFYVPRWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGI 231 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 +LGD + +M L+ + S + +R + +AI Y R+RH G L +QP+M+ Sbjct: 232 MLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRT 291 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+AL+ AA L+ RLA++F+ S E A+ RI+ P K+W CK A + E ME Sbjct: 292 VLADLALESEAALVLAMRLADAFERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVME 350 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG+GY+++ IAR +RE+P NSI GSGN M LDVL + + + L + L DLG Sbjct: 351 VFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALLAEL-SDLG 409 Query: 478 SSGKKVITIL 487 + ++ L Sbjct: 410 AGEPRIRAAL 419 >gi|255321229|ref|ZP_05362395.1| protein AidB [Acinetobacter radioresistens SK82] gi|255301783|gb|EET81034.1| protein AidB [Acinetobacter radioresistens SK82] Length = 549 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 25/533 (4%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 N + +D +L ++ S L LG S + A AN TP+L A+ G R Sbjct: 20 NLFDTDPILQEILQRHQSQDQARLSQLGTIAGSAEYYQYAEQANRYTPELKAFDARGRRC 79 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154 D +EFHPAWH + + +H F Q AAR YL Q+E G L Sbjct: 80 DVIEFHPAWHQWMALNRSYEVHAY----PFSKPDDAQGWLNWAARFYLNGQIECGSLCPT 135 Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 ++T S+ L P + + K+ S+ YD + QK S+ +G+G+TEK+GG+D+ A Sbjct: 136 AMTLGSIPLLQREPALWQQLGDKLLSQHYDVRDLPIDQKKSIWLGMGMTEKQGGSDVRAN 195 Query: 215 TSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNG 269 ++ GQ+ Y ++GHKWF S+PM DA +++A E + CF VPR LEDG N Sbjct: 196 QTKAVPVGQRGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLACFFVPRWLEDGRKNS 255 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + QRLK+K+GNRSN++ E+EF +G +LG+ + +M L + S + +R Sbjct: 256 IHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAYTRLTCVVGSSAMLR 315 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L + + Y R+R G L QP+M+ + D+AL+ AA L+ LA+ + + S+ Sbjct: 316 QALVQCLAYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMHLASCYQQDDPLSK- 374 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A+ R+M P K+W CK + EAME GG+GY+E +AR +RE+P NSI GSGN Sbjct: 375 -AWQRLMTPAAKFWICKRVVELSGEAMEVFGGNGYVETGIMARIFREAPVNSIWEGSGNV 433 Query: 450 MVLDVLNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 M LDVL +++ E L F+ QD +++ +L+ + + +AR L Sbjct: 434 MCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQSPDQLQFMARTLVS 493 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA---AHIID 556 ++ + + A L + + +A+ F++ R+ HGR H++D Sbjct: 494 RLVMLAQAVLLKKYAPDFVANAFIQTRY--------TAFHGRVTGLIDLHLVD 538 >gi|121602440|ref|YP_989126.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis KC583] gi|120614617|gb|ABM45218.1| acyl-CoA dehydrogenase family protein [Bartonella bacilliformis KC583] Length = 541 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 166/533 (31%), Positives = 295/533 (55%), Gaps = 15/533 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L++ + + P + + + +G +V S A +L+R+AN + P LH G+R Sbjct: 13 NAFFSDTLMLRVASTLPESLLENFQEVGAFVASREAWDLSRLANRHRPVLHHNNEWGQRI 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 +++E HP+++ L R S GL S+W+ + E VR QA RA RL L A LE GHL Sbjct: 73 EQLEMHPSYYTLQRYSRQMGLVSSLWENITVENGVRYQA---RAIRLILSAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR---G 207 +TSA++ L+ + K W + SR+YD ++K K ++ + E R Sbjct: 130 VVITSAAIAVLVGNSELFKRWQNVLLSRQYDFSSKPIHHKKGASLSCAFDDIEESRKHFS 189 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +A S +KI +Y L+ K + +P++D +++ A+++GR+ CF VPRL E+G Sbjct: 190 SFSMAQKISFDEKIGCDLYNLNITKTNVVNPIADGYLVSAEIDGRLNCFFVPRLQENGEL 249 Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG+ R L + G S ++F N++G+LLG++ T ++D++ ++ D +++S Sbjct: 250 NGIISVRHLIQRSGEHSVPEGSVDFQNSYGWLLGNIGEGTKIIKDVETMVRFDQSVISAG 309 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 +R +L I + R++ + + P+ +R +DIALDIAA+ AL FRLA +FD A + Sbjct: 310 VLRAALQFGIDFFRQKMPNQPL---PPLTERIFSDIALDIAASQALVFRLAWAFDNAVND 366 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EAA+A IM PI Y ++ +I E + +G +IE +++ R+ A IL + Sbjct: 367 RSEAAFAHIMTPIVAYHVNQLVIPIIGEIIAQLGLESFIEGNPLSQMLRDGSAR-ILRNN 425 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 N +V D + ++ K LF++L + D+G +G + I I++ + + ++G RF E Sbjct: 426 ANQLVKDAILIVNKAPGLFQKLLEKIATDIGPAGPRAIEIIKSAAQMASTNEGAGRFFVE 485 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 ++A A +AA+L M+ + + ++E+R S++ M+ R+N +++ LY Sbjct: 486 QVAYAGAAASLRCKKMDYVVNAYMESRLGGQWRSSYGMMIARYNPLELLNILY 538 >gi|319786941|ref|YP_004146416.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] gi|317465453|gb|ADV27185.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 544 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 191/535 (35%), Positives = 292/535 (54%), Gaps = 24/535 (4%) Query: 17 QPS--DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQEL 73 QPS ++ NQPP F + + D +L A++ L+ G + EL Sbjct: 2 QPSRFETHVVENQPPAFAPRDLWGDDLALREAVVRGGAGAFTARLQAYG----ALAGDEL 57 Query: 74 ARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 R+ AN + P+L + G R D VEFHPA+H L+ + G+ W EPV Sbjct: 58 YRLGFDANRDRPRLRTHDAQGRRIDLVEFHPAYHRLMELAKAHGVAGLSW---HEPV--P 112 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 A RAA YL Q EAG ++T A++ L P + + WA + YDP + Sbjct: 113 GAQVARAALAYLHHQAEAGTSCPLTMTHAAVPVLRQAPALAQ-WARLAAAPAYDPRDVPM 171 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS--DGIYCLSGHKWFLSSPMSDAFIMLAQ 248 KT + +G+G+TEK+GG+D+ T+ + +G + L GHKWF S+PMSD F++LAQ Sbjct: 172 AAKTGLTLGMGMTEKQGGSDVRGNTTTATPLPGREG-WRLVGHKWFFSAPMSDGFLVLAQ 230 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +GCFL+PR L DGS N RLK+K+G+ SNA+ E+EF + + +G+ Sbjct: 231 TPDGLGCFLLPRRLPDGSKNAFRLMRLKDKLGDWSNASSEVEFCDALAWPVGEPGRGVAT 290 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M +L LD + + + R+++A+A+H+AR R G +L+ P+M +AD+A++ A Sbjct: 291 IIPMVMLTRLDCMLAAAAQARMAMAQAVHHARHRVTFGRVLVGHPLMANVLADLAIESEA 350 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AT L+ +A + + + + AAYAR+ + KYW C+ APA++ EA EC+GG+GY+EE Sbjct: 351 ATVLALDVAAAVEAGQGDAGAAAYARVATAVGKYWLCRRAPALVNEAQECLGGAGYVEES 410 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVIT 485 + R YR++P NSI GSGN LDVL L + + + L LE+ G ++ Sbjct: 411 LLPRLYRQAPLNSIWEGSGNIQCLDVLRALAREPQVAQALRGALERAAGFDPVLAREAEA 470 Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 I R + E + AR+L E+IAL AAL+ AG + +A+ F+ +R LD H Sbjct: 471 IGRQLAAPAAELEVRARYLVERIALVLQGAALHAAG-SPVAEAFVRSR-LDGAHG 523 >gi|167921049|ref|ZP_02508140.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei BCC215] Length = 546 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRSELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|167904835|ref|ZP_02492040.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei NCTC 13177] Length = 546 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|126439329|ref|YP_001060948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 668] gi|134281474|ref|ZP_01768182.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|226193162|ref|ZP_03788772.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|237814331|ref|YP_002898782.1| protein AidB [Burkholderia pseudomallei MSHR346] gi|126218822|gb|ABN82328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 668] gi|134247141|gb|EBA47227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|225934762|gb|EEH30739.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|237504594|gb|ACQ96912.1| protein AidB [Burkholderia pseudomallei MSHR346] Length = 546 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|76810278|ref|YP_331576.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|167847872|ref|ZP_02473380.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|254184010|ref|ZP_04890601.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|254186476|ref|ZP_04892993.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254194570|ref|ZP_04901001.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|254258200|ref|ZP_04949254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] gi|254298716|ref|ZP_04966167.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|76579731|gb|ABA49206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|157808475|gb|EDO85645.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|157934161|gb|EDO89831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|169651320|gb|EDS84013.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|184214542|gb|EDU11585.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|254216889|gb|EET06273.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] Length = 546 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|167740775|ref|ZP_02413549.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] Length = 538 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 186/519 (35%), Positives = 274/519 (52%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + L R L ++IAL + A L A ++D F+ RF Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRF 517 >gi|126454558|ref|YP_001068248.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1106a] gi|242314546|ref|ZP_04813562.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|126228200|gb|ABN91740.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106a] gi|242137785|gb|EES24187.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] Length = 546 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|53720992|ref|YP_109978.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|53724026|ref|YP_104472.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei ATCC 23344] gi|67643102|ref|ZP_00441851.1| protein AidB [Burkholderia mallei GB8 horse 4] gi|121601096|ref|YP_994621.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei SAVP1] gi|124385909|ref|YP_001027553.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10229] gi|126451248|ref|YP_001082549.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10247] gi|167000125|ref|ZP_02265948.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] gi|217423893|ref|ZP_03455393.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|254174798|ref|ZP_04881459.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|254201549|ref|ZP_04907913.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|254206885|ref|ZP_04913236.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] gi|254357440|ref|ZP_04973714.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei 2002721280] gi|52211406|emb|CAH37397.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|52427449|gb|AAU48042.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 23344] gi|121229906|gb|ABM52424.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1] gi|124293929|gb|ABN03198.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10229] gi|126244118|gb|ABO07211.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10247] gi|147747443|gb|EDK54519.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|147752427|gb|EDK59493.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] gi|148026504|gb|EDK84589.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei 2002721280] gi|160695843|gb|EDP85813.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|217392956|gb|EEC32978.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|238524353|gb|EEP87786.1| protein AidB [Burkholderia mallei GB8 horse 4] gi|243063931|gb|EES46117.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] Length = 546 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 284/546 (52%), Gaps = 23/546 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMAAYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS--THCMLHGRFNAAH 553 + L R L ++IAL + A L A ++D F+ RF + T + R +AA Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRFGEPAWGRVTGALDARRVDAAA 538 Query: 554 IIDSLY 559 ++ Y Sbjct: 539 LLQRAY 544 >gi|319898953|ref|YP_004159046.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73] gi|319402917|emb|CBI76468.1| acyl-CoA dehydrogenase [Bartonella clarridgeiae 73] Length = 542 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 168/533 (31%), Positives = 293/533 (54%), Gaps = 14/533 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + + P+ + E +G +V S A +LAR+AN P L G+ Sbjct: 13 NAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSYRPTLRYNNGWGQPK 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSF-EPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 ++++ HP++H L R S GL S+W+ + E VR QA RA RL L+A LE GHL Sbjct: 73 EELDIHPSYHTLQRYSRQAGLVASLWENTTSENGVRYQA---RAIRLALLAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209 V SA++ L+ + K W + SR+YD ++KA K ++ ++ Sbjct: 130 IIVASAAIAVLIGDVELFKKWKDMLLSRQYDLSSKAIDNKKGASLTYAFDNIEESEKYAL 189 Query: 210 DIAAI--TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 ++ A+ S +K+ +Y L+ K + +PM+D +I+ A+++G + CFLVPR+ E+G Sbjct: 190 NVPAVQRISFDEKMGRDLYRLNIIKTQVINPMADGYIVSAEIDGLLSCFLVPRMQENGLL 249 Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG+ R L + G S +EF + G+LLG++ ++D++ ++ D AI+S Sbjct: 250 NGIILVRYLIQRSGEYSAPEGVVEFRDCCGWLLGNIGEGAKVIKDIETMMRFDQAIISAG 309 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 +R +L +I++ R++ ++ P+ +R ADIALDIAA+ AL RLA +FD A S Sbjct: 310 VLRAALQFSINFLRQKMLNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAASN 366 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EAA+ARIM PI ++ ++ E + +G +++ + + R+SPA + Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIVGEIIAQVGIESFMDNNPLLQILRDSPARIVKNSG 426 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 N +V D + + +K LF+QL + D+G +G + I I++ ++++ ++G RF E Sbjct: 427 VNQLVKDAILIGDKAPGLFQQLLEKISADIGPAGPRAIEIIKSAVNMASTNEGAGRFFVE 486 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 ++A AS++AAL + + + ++E+R S++ ML R+N A ++D LY Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYNPAQLLDVLY 539 >gi|167826352|ref|ZP_02457823.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9] Length = 531 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 186/519 (35%), Positives = 274/519 (52%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRAELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + L R L ++IAL + A L A ++D F+ RF Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFIATRF 517 >gi|73539910|ref|YP_294430.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72117323|gb|AAZ59586.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 553 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 156/405 (38%), Positives = 235/405 (58%), Gaps = 12/405 (2%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+LH Y GER D+V FHP+WHALL L + EP R A R Sbjct: 63 ANRYAPELHTYSRTGERVDQVTFHPSWHALLSLLRSQQLQAMPFA---EP--RAGAWIAR 117 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 A +L AQ+E+G L ++T AS+ L + D P+++++ +D + KT++ Sbjct: 118 TAGYFLQAQVESGSLCPITMTFASIPVLRKETALFADLEPRLYAKNHDARDLPWRDKTAI 177 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV--- 249 IG+G+TEK+GG+D+ A T+ + Y L+GHKWF S+PM DA +++A++ Sbjct: 178 MIGMGMTEKQGGSDVRANTTVAHPVRGEGRGAEYLLTGHKWFFSAPMCDAHLVVARMGAE 237 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G + CF VPR +DGS N + QRLK+K+GNRSN++ E+EF G L+G+ + Sbjct: 238 DGPLSCFFVPRFRDDGSKNPIQIQRLKDKLGNRSNSSSEVEFREASGILIGEEGRGIPTI 297 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M LD I S + +R + +A+H+ R R G +L DQP+M+ +AD+AL+ AA Sbjct: 298 IEMATSTRLDCVIGSAAILRAAYVQALHHTRHRAAFGSLLADQPLMRNVLADLALESEAA 357 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T L LA++F+ A++ AA+ R++ P K+W CK EAME GG+GY+E+ Sbjct: 358 TLLMMELAHAFEHAETDPLAAAWKRVVTPAAKFWICKRTIEATGEAMEVWGGNGYVEDGP 417 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 +AR YRE+P NSI GSGN M LDVL +++ + +L L + Sbjct: 418 MARLYREAPVNSIWEGSGNIMCLDVLRAIQRTPDDAARLLHDLSR 462 >gi|325003190|ref|ZP_08124302.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1] Length = 551 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 167/437 (38%), Positives = 250/437 (57%), Gaps = 11/437 (2%) Query: 58 LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117 LE L E + + +E AR AN + P+LH + G R D+V FHP+WH L+R S+ GL Sbjct: 55 LESLAERIGTAAHREHARAANAHEPELHTHDRTGHRIDEVGFHPSWHELMRVSVEHGLAA 114 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177 + W + AH RAA YL +Q+E GHL S+T A++ AL P + + P Sbjct: 115 APWAAAPG----TGAHVTRAAGFYLHSQVEQGHLCPISMTYAAVPALQHAPELAAAYLPG 170 Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 + +R Y+P P K+ + G+ +TEK+GG+D+ + ++ DG Y L+GHKWF S+ Sbjct: 171 LTARSYEPGLADPATKSGLLAGMSMTEKQGGSDVRSGSTVAVPQPDGSYRLTGHKWFTSA 230 Query: 238 PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 PM+D F+ LAQ G + C ++PR+L DG+ N + QRLK+K+GNRSNA+ E+E+S G+ Sbjct: 231 PMNDLFLTLAQAPGGLTCLVLPRVLPDGTRNAIRLQRLKDKLGNRSNASSEIEYSGAAGW 290 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 +G+ + +M + LD + + R ++ EA H+ R G L DQP+M+ Sbjct: 291 RVGEEGRGVRTIIEMVSMTRLDCVLGAAGTQRAAVTEAAHHVAHRSAFGARLADQPLMRE 350 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A++A + AAT L+ RLA + D E A R+ P KY CK AV+AEA+E Sbjct: 351 VVAELAAESEAATVLALRLAGAVDRG-----ETALLRLALPAAKYLVCKRTSAVVAEALE 405 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 C+GG+GY+EE + R YRE+P NSI GSGN LDVL + + + L + ++ G Sbjct: 406 CLGGNGYVEESDLPRLYREAPLNSIWEGSGNVTALDVLRAIAREPAAVDALLAEIDLGAG 465 Query: 478 SSGK--KVITILRDSIS 492 S + VI LR ++ Sbjct: 466 SDPRLDAVIAALRAELA 482 >gi|149201829|ref|ZP_01878803.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035] gi|149144877|gb|EDM32906.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035] Length = 543 Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 174/487 (35%), Positives = 258/487 (52%), Gaps = 21/487 (4%) Query: 56 KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL 115 + L G + + T + R AN + P+L + GG R D+V FHP +H L+R I G Sbjct: 46 ETLAAYGARIGTETLRSAGRAANRHPPELVLFDAGGRRLDEVRFHPTYHDLMRVGIGAGY 105 Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175 W+ + K H AA +YL +Q+E G ++T A++ AL + + DW Sbjct: 106 AAIPWEGA------KGGHVTHAAMVYLTSQVEPGVCCPMTMTYAAVPALRSDKALFADWV 159 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ +R YDP K +K +G+ +TEK+GG+DI A + Y L GHKWF Sbjct: 160 PKLTARAYDPGAKPLARKPGATLGMAMTEKQGGSDIRANATTATP-EGAFYRLFGHKWFC 218 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 S+PMSD F+ LAQ + CFLVPR LE G+ N + QRLK+K+GNR+NA+ E+E+ Sbjct: 219 SAPMSDGFLTLAQAPEGLTCFLVPRWLE-GARNEIQIQRLKDKLGNRANASAEIEYHGAI 277 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 + LGD + +M LD+A+ MR +L A H+A R V LIDQP+M Sbjct: 278 AYRLGDEGAGICTILEMVHHTRLDTAMAPAGLMRAALDHARHWAHHRSVFQRQLIDQPLM 337 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+ALD AL +A +FD +S +E A+AR+ + K+ K+ P V+ EA Sbjct: 338 RAVLADLALDWEGTLALGLHVARAFD-GRSPAER-AFARLGVALAKFLGNKLCPGVVYEA 395 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK----GTNLFEQLFST 471 ME +GG GYIE+ + YRE+P NSI GS N + LD+L L K G L +L S Sbjct: 396 MEAMGGMGYIEDTPLPLLYREAPLNSIWEGSANVICLDILRTLRKEPLAGEVLTAELASV 455 Query: 472 LEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 QD ++ L+ + + ++ AR+ E +A +A+ L R + +A + Sbjct: 456 AGQD-----RRFDAALKAHMQTFPKLPEEAQARWYAESLATLLTASVLMRHAPDAVAQGY 510 Query: 530 LENRFLD 536 + R D Sbjct: 511 IATRLSD 517 >gi|221069663|ref|ZP_03545768.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714686|gb|EED70054.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 558 Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 175/479 (36%), Positives = 265/479 (55%), Gaps = 23/479 (4%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E A +AN +TP+L + G D VEFHP+WH L++ GL S+ FE R + Sbjct: 58 EHAELANRHTPELQRFDARGRVLDAVEFHPSWHRLMQLYREQGL-ISL---PFESQGRGR 113 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AA YL Q+E G L ++T+A++ L PR+ ++FS EYDP + Sbjct: 114 -WSAWAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPRLWSQLQAQLFSHEYDPRDLPLA 172 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLA 247 QK S+ IG+G+TEK+GG+D+ A T+ + + DG Y L GHKWF S+PM DA +++A Sbjct: 173 QKKSIWIGMGMTEKQGGSDVRANTTVARPVHDGGRGGEYLLRGHKWFFSAPMCDAHLVVA 232 Query: 248 QV---EGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 ++ G +G CF VPR DGS N L QRLK+K+GNRSN++ E+E + +G L+G+ Sbjct: 233 RMATASGELGGHACFFVPRWRPDGSKNPLRVQRLKDKVGNRSNSSAEVELQDAWGILMGE 292 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + +M L+ + S + +R + ++I YAR+R G L DQP+M +AD Sbjct: 293 EGRGIPTIIEMASYTRLNCVLGSAAIVRSATVQSIAYARQRSAFGKHLSDQPLMASVLAD 352 Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +AL+ A+ L+ LA +++ EA A+ RIM P K+W CK + + EAME G Sbjct: 353 LALESEASMQLAMHLAQAYESEADGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFG 412 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 G+GY++E ++R +RE+P NSI GSGN M LDVL + + L L D+ + Sbjct: 413 GNGYVQESIVSRLFREAPVNSIWEGSGNVMCLDVLRAMGREPEAARLLLQDLS-DMAAD- 470 Query: 481 KKVITILRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++T + S++ L L AR L + + L + A L+R +AD F++ R Sbjct: 471 HPLLTAMTQSLARRLSAAPDALEPQARRLVQDLCLLAQACLLHRHAPAPMADGFIQTRL 529 >gi|293393204|ref|ZP_06637519.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582] gi|291424350|gb|EFE97564.1| acyl-CoA dehydrogenase [Serratia odorifera DSM 4582] Length = 542 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 182/520 (35%), Positives = 275/520 (52%), Gaps = 23/520 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALI----ANFPSVVHKELELLGEYVLSCTAQELARMANYN 80 NQP N + SD+ L + A + + V L LG+ + + + EL R+AN N Sbjct: 9 FNQPKPLGNSNLFLSDTPLREAVQREHAGWDADV---LASLGQQLGTQESLELGRLANAN 65 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L Y G+R D + FHPAWH L++ + + +H W E R + RAAR Sbjct: 66 PPELLRYDASGQRLDDLRFHPAWHILMQGLVANRVHNLPW----EEQARIGSVAARAARF 121 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 L AQ+EAG L ++T ++ L + P +DW P + S YD QK + IG Sbjct: 122 ILHAQVEAGTLCPITMTYGAIPLLQRSLPAPFRDWLPPLLSDRYDAHLLPGGQKRGLLIG 181 Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 +G+TEK+GG+D+ + T+ ++ DG Y L GHKWF S P SDA ++LAQ EG + C Sbjct: 182 MGMTEKQGGSDVLSNTTSATPLAGRGDGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLSC 241 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F +PR+L DG+ N + +RLK+K+GNR+NA+ E+EF + +LLGD + M Sbjct: 242 FFLPRILPDGTRNAVRLERLKDKLGNRANASSEVEFQDATAWLLGDEGDGVRQILKMGSQ 301 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 D A+ S MR +L+ A+++A +R G LI QP+M++ +A +AL + TA R Sbjct: 302 TRFDCALGSHGLMRRALSVALYHAHQRQAFGKTLIQQPLMRQVMAGMALRLEGQTAALMR 361 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA ++ ++ RIM K+ C+ +AEAME +GG GY E+ + R YR Sbjct: 362 LARAYG-SQQEPLSQGLCRIMTSAAKFDVCRQGIPFVAEAMEVLGGIGYCEDSELPRLYR 420 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS---GKKVITILRDSIS 492 E P NSI GSGN M LDVL K + E + L + G + ++ +L+ + Sbjct: 421 EMPVNSIWEGSGNIMCLDVLRAWAKSPLVQEAVHQELAEVKGQNRHYDRQWRQLLQQTGK 480 Query: 493 LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532 L + AR LT ++ +AA L R IA+ + ++ Sbjct: 481 LQETQ---ARALTGRLFTLFAAAQLLRYASPPIAEAWCQS 517 >gi|167571746|ref|ZP_02364620.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis C6786] Length = 546 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 185/519 (35%), Positives = 275/519 (52%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ I N +++D L AL S L+ G + + + A AN + P+L Sbjct: 10 NQFDELIDYNLFATDPALGEALERAGASWAAPRLDAYGARLGARDTAQRAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL S+ R R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYRGQGL-ISLAFRD----ARAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A + L P + K++S +DP + K S+ +G+G+TE Sbjct: 125 QIEAGTLCPATMTQAGIPVLQKEPALWAQLKDKLYSDVHDPRDVPIDAKQSITLGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTVAAPVGAGGRGGDYLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVLIQRLKNKVGNRSNSSSEVELDDAWGVMLGEEGRGIPTIIEMANYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI YAR+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+ P K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FER-----REPAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGRDARIRAELDALRALLGTPPD 478 Query: 497 DK-GLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + L R L ++IAL + A L A ++D F+ RF Sbjct: 479 AREALGRVLAQRIALVAQACLLLDAAPAAVSDGFITTRF 517 >gi|262380086|ref|ZP_06073241.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter radioresistens SH164] gi|262298280|gb|EEY86194.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter radioresistens SH164] Length = 549 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 173/540 (32%), Positives = 276/540 (51%), Gaps = 39/540 (7%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 N + +D +L ++ S +L LG S + A AN TP+L A+ G R Sbjct: 20 NLFDTDPVLQEILQRHQSQDQAKLSQLGAIAGSAEYYQYAEQANRYTPELKAFDARGRRC 79 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSFE----PVVRK---QAHKIRAARLYLMAQLE 147 D +EFHPAWH + +RS+E P ++ Q AAR YL Q+E Sbjct: 80 DVIEFHPAWHQWMAL-----------NRSYEVHAYPFIKPDDAQGWLNWAARFYLNGQIE 128 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G L ++T S+ L P + + K+ S+ YD + QK S+ +G+G+TEK+G Sbjct: 129 CGSLCPTAMTLGSIPLLQREPALWQQLGDKLLSQHYDARDLPISQKKSIWLGMGMTEKQG 188 Query: 208 GTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-VGCFLVPRLL 262 G+D+ A ++ GQ Y ++GHKWF S+PM DA +++A E + CF VPR L Sbjct: 189 GSDVRANQTKAVPVGQHGRGQGYLITGHKWFFSAPMCDAHLVVANTEQDGLACFFVPRWL 248 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 +DG N + QRLK+K+GNRSN++ E+EF +G +LG+ + +M L + Sbjct: 249 DDGRKNSIHVQRLKDKVGNRSNSSSEVEFQEAWGIMLGEAGRGIPTIIEMAAYTRLTCVV 308 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + +R +L + + Y R+R G L QP+M+ + D+AL+ AA L+ LA + + Sbjct: 309 GSSAMLRQALVQCLTYTRQRQAFGKPLAAQPLMQSVLTDLALESEAAVQLAMHLACCYQK 368 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 S+ A+ R+M P K+W CK + EAME GG+GY+E ++R +RE+P NSI Sbjct: 369 DDPLSK--AWQRLMTPAAKFWICKRVVELSGEAMEIFGGNGYVETGIMSRIFREAPVNSI 426 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQL---FSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 GSGN M LDVL +++ E L F+ QD +++ +L+ + + Sbjct: 427 WEGSGNVMCLDVLRAVQRDRESIEILIHSFAGTIQDEPLLQQELQQLLQLFAQSPDQLQF 486 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNA---AHIID 556 +AR L ++ + + A L + + +A+ F++ R+ HGR H++D Sbjct: 487 MARTLVSRLVILAQAVLLKKYAPDFVANAFIQTRY--------TAFHGRVTGLIDPHLVD 538 >gi|167587918|ref|ZP_02380306.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 550 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 168/436 (38%), Positives = 246/436 (56%), Gaps = 12/436 (2%) Query: 57 ELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH 116 +L+ G + S +LA AN+ P+LHA+ G R D+VEFHPAWHALL +G Sbjct: 42 QLDAYGARLGSADTAQLADDANHYPPELHAFDRRGRRIDRVEFHPAWHALLGLYRAEGF- 100 Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 S+ R P AA YL Q+EAG L ++T A++ L P + + Sbjct: 101 VSLAFRDTRP----GRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWEMLRD 156 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHK 232 K++S YDP + K S+ IG+G+TEK+GG+D+ A T+ + G Y L GHK Sbjct: 157 KLYSDVYDPRDVPVADKRSIWIGMGMTEKQGGSDVRANTTLATPVGAGGRGGEYRLRGHK 216 Query: 233 WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 WF S+PM DA +++A+ + G CF VPR DG+ N + QRLK+K+GNRSN++ E+E Sbjct: 217 WFFSAPMCDAHLVVARTDAGGPSCFYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIEL 276 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 + +G +LGD + +M L+ + S + +R + +AI Y R+RH G L + Sbjct: 277 DDAWGIMLGDEGRGIPTIIEMATCTRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAE 336 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 QP+M+ +AD+AL+ AA AL+ RLA +F E E A+ RI+ P K+W CK A + Sbjct: 337 QPLMRTVLADLALESEAALALAMRLAAAF-ERDDTPRERAWKRIVTPAAKFWVCKRAVEL 395 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 E ME GG+GY+++ IAR +RE+P NSI GSGN M LDVL + + + LF Sbjct: 396 TGEVMEVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAVSREPDAAAALFDE 455 Query: 472 LEQDLGSSGKKVITIL 487 L ++LG ++ L Sbjct: 456 L-RELGGDEPRIRAAL 470 >gi|119383699|ref|YP_914755.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119373466|gb|ABL69059.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 542 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 181/517 (35%), Positives = 271/517 (52%), Gaps = 24/517 (4%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 LNQP + + D LL A++A + + + L G + ++ AR AN + P+L Sbjct: 15 LNQPADPGDRDLWRDDPLLRAMLAAGGAPL-EGLARYGALLGRAGMRDAARDANRHPPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + GG R D++ FHPAWH ++ SI G H W+ H AA +YL + Sbjct: 74 VLFDSGGRRLDELRFHPAWHRFMQDSIAAGYHSVAWEGG------PAGHLTHAAMVYLAS 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+E GH ++T A++ + + DW + SR YDP + K +G+ +TE Sbjct: 128 QVEPGHCCPLTMTYAAVPVISAAGDLPGDWRAALLSRRYDPAVRPLAAKQGATLGMAMTE 187 Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 K+GG+D+ A T++ + DG + L+GHKWF S+PMSD F+ LAQ + CFLVPR LE Sbjct: 188 KQGGSDVRANTTRAEP--DGAAWRLTGHKWFCSAPMSDGFLTLAQTGRGLTCFLVPRWLE 245 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 +G N + QRLK+K+GNRSN + E+E+ + +G+ + +M LD+A+ Sbjct: 246 EGR-NAIRIQRLKDKLGNRSNGSAEIEYQRALAWRIGEEGDGIRTIVEMVHHTRLDTAMA 304 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 MR +L EA H+A R LIDQP+M+ +AD+ LD AL +A SFD Sbjct: 305 PAGLMRAALREAHHWAACRSAFQRRLIDQPLMRAVLADLVLDWQGCLALGLHVAASFD-- 362 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 +E+ A+ARI + KY K+ P V+AEAME +GG GY+E+ + YRE+P N I Sbjct: 363 GRGAEDRAFARIGVALAKYLSNKLCPQVVAEAMEVLGGMGYVEDTPLPMLYREAPLNGIW 422 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG---- 499 GSGN + LD L L + E L + L+ + K + +++ +E G Sbjct: 423 EGSGNVICLDALRTLAREPLAAEMLAARLD-----AAKGLEPAYDAALAAHRECWGGGVP 477 Query: 500 --LARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR+ E+ AL +AA L G D+A F+ R Sbjct: 478 EAEARWFAERSALLLTAAVLLAHGDADLAGAFVRTRL 514 >gi|264676236|ref|YP_003276142.1| acyl-CoA dehydrogenase [Comamonas testosteroni CNB-2] gi|262206748|gb|ACY30846.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 558 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 183/533 (34%), Positives = 287/533 (53%), Gaps = 36/533 (6%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANY 79 NQ G+N +D+ L ++ +F +++ + LGE E A +AN Sbjct: 10 FNQFDELTGINLLQADAALQEVLQRQQAQSFAPALNRFAQQLGEK----QNWEHAELANR 65 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 +TP+L + G D VEFHP+WH L+ GL S+ FE R + AA Sbjct: 66 HTPELQRFDARGRVLDAVEFHPSWHRLMELYRKQGL-ISL---PFESPSRGR-WSAWAAG 120 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 YL Q+E G L ++T+A++ L P++ ++FS EYD + QK S+ IG Sbjct: 121 FYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLDQKKSIWIG 180 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252 +G+TEK+GG+D+ A T+ + + +G Y L GHKWF S+PM DA +++A++ G Sbjct: 181 MGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVARMATASGE 240 Query: 253 VG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G CF VPR DGS N + QRLK+K+GNRSN++ E+E + +G L+G+ + Sbjct: 241 LGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGEEGRGIPTI 300 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M L+ + S + +R + ++I YAR+R G L DQP+M +AD+AL+ A+ Sbjct: 301 IEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLADLALESEAS 360 Query: 370 TALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L+ LA +++ EA+ A+ RIM P K+W CK + + EAME GG+GY+++ Sbjct: 361 MQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFGGNGYVQDS 420 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--SSGKKVITI 486 +AR +RE+P NSI GSGN M LDVL + + L QDLG ++ + ++T Sbjct: 421 IVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLL----QDLGDMAADQPLLTA 476 Query: 487 LRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + S++ L + L AR L + + L + A L+R +AD F+ R Sbjct: 477 MAQSLAKRLSDSPEALEPQARRLVQDLCLLAQACLLHRHAPEHMADGFIHTRL 529 >gi|260432495|ref|ZP_05786466.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157] gi|260416323|gb|EEX09582.1| protein AidB [Silicibacter lacuscaerulensis ITI-1157] Length = 560 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 179/512 (34%), Positives = 267/512 (52%), Gaps = 14/512 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQPP ++ ++SD L++ A L G + +E R AN + P+L Sbjct: 37 NQPPDRGDVDLWASD-LVLRDCATRAGARAAPLAAYGAALGRAETREAGRDANLHPPELC 95 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + GG R D+V FHPA+H ++ S G WD + H AA +YL +Q Sbjct: 96 LFDRGGRRLDEVRFHPAYHHMMDLSQSAGYAALAWDGA------PGGHATHAAMVYLASQ 149 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E GH ++T A++ AL P + + W PK+ + YDP + +K S +G+ +TEK Sbjct: 150 VEPGHCCPLTMTYAAVPALAANPELAEIWRPKLTAATYDPAPRPIGEKRSATLGMAMTEK 209 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 +GG+D+ A T+ + D + L GHKWF S+PMSD F+ LAQ G + CFL+PR LE Sbjct: 210 QGGSDVRANTTTATRDGDA-WRLRGHKWFCSAPMSDGFLTLAQAPGGLTCFLLPRWLES- 267 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N + RLK+K+GNR+NA+ E+EF + F LGD + +M LD+A+ Sbjct: 268 ERNAIHLMRLKDKLGNRANASSEVEFHDALAFQLGDEGAGVRTIIEMVHHTRLDTAMAPA 327 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 MR +L+EA H+ R LIDQP+M+ +AD+ALD A L R+A +FD Sbjct: 328 GLMRAALSEAHHWVSHRSAFQRRLIDQPLMRAVLADLALDWEGALTLGLRVARAFD--GE 385 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 +E+ A+ARI + K+ K P V EAME +GG GY+E+ + YRE+P N I G Sbjct: 386 TAEDRAFARIGVALAKFLSNKRCPVVAVEAMEVLGGMGYVEDTPMPMLYREAPLNGIWEG 445 Query: 446 SGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARF 503 SGN + LD+L L + + + + L+ G+ + + RD + AR+ Sbjct: 446 SGNVICLDILRSLARDPLAAQTVQAELDAATGADRRYDAALKAHRDRWPTLPPE-AEARW 504 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRFL 535 TE A +AA L R +AD ++ R L Sbjct: 505 FTEATAHLLTAALLLRHAPGAVADGYIATRVL 536 >gi|172059183|ref|YP_001806835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171991700|gb|ACB62619.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 550 Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 182/518 (35%), Positives = 276/518 (53%), Gaps = 15/518 (2%) Query: 26 NQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ + N +++D +L AL + L+ G + S LA AN +TP+L Sbjct: 10 NQFDELVDYNLFATDIALRDALARAGANWAVPRLDAYGARLGSADTARLADEANRHTPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHPAWH LL ++G S+ R P AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPAWHTLLGLYRNEGF-VSLPFRDTRP----GRWAASAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T A++ L P + K++S +YDP + K S+ G+G+TE Sbjct: 125 QIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSDDYDPRDVPVADKRSIWFGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G Y L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E ++ +G +LGD + +M L Sbjct: 245 RWRPDGTKNAVEIQRLKNKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLS 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R + +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA++ Sbjct: 305 CVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALALAMRLADA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ S E A+ RI+ P K+W CK A + E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERDDS-PRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFREAPV 423 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKED 497 NSI GSGN M LDVL + + + L + L + + LR ++ + Sbjct: 424 NSIWEGSGNVMCLDVLRAVSREPDAAAALLAELADLGAGEPRIRAALDALRAMLAAPADT 483 Query: 498 -KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + R +++AL + A L R +AD F+ R Sbjct: 484 LEASGRVFAQRLALVAQACLLRRDAPAAVADAFVATRL 521 >gi|167896429|ref|ZP_02483831.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 7894] Length = 513 Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 184/515 (35%), Positives = 272/515 (52%), Gaps = 21/515 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEATGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDELHA-LGGRDARIRSELDALRAQLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 + L R L ++IAL + A L A ++D F+ Sbjct: 479 ALEALGRVLAQRIALLAQACLLSDAAPAVVSDGFI 513 >gi|167582818|ref|ZP_02375692.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis TXDOH] Length = 539 Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 184/519 (35%), Positives = 276/519 (53%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + + A AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI YAR+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ EAA+ RI+ P K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L + LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALVDEL-RALGGHDARIRAELDALRALLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + L R L ++IAL + A L A +++ F+ RF Sbjct: 479 ALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRF 517 >gi|299533428|ref|ZP_07046810.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas testosteroni S44] gi|298718634|gb|EFI59609.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas testosteroni S44] Length = 558 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 185/541 (34%), Positives = 289/541 (53%), Gaps = 36/541 (6%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71 Q D+ NQ G+N +D+ L ++ +F + + + LGE Sbjct: 2 QALDTHDVFNQFDELTGINLLQADAALQEVLQRQQAQSFVPALKRFAQQLGEK----HNW 57 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E A +AN +TP+L + G D VEFHP+WH L+ GL S+ FE R + Sbjct: 58 EHAELANRHTPELQRFDARGRVQDAVEFHPSWHRLMELYRKQGL-ISL---PFESPSRGR 113 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AA YL Q+E G L ++T+A++ L P++ ++FS EYD + Sbjct: 114 -WSAWAAGFYLHGQVEQGTLCPATMTTAAIPVLQKEPQLWSQLQARLFSHEYDARDLPLD 172 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLA 247 QK S+ IG+G+TEK+GG+D+ A T+ + + +G Y L GHKWF S+PM DA +++A Sbjct: 173 QKKSIWIGMGMTEKQGGSDVRANTTVARPVHEGGRGGEYLLRGHKWFFSAPMCDAHLVVA 232 Query: 248 QV---EGRVG---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 ++ G +G CF VPR DGS N + QRLK+K+GNRSN++ E+E + +G L+G+ Sbjct: 233 RMATPSGELGGHACFFVPRWRPDGSKNPVRVQRLKDKVGNRSNSSSEVELQDAWGILMGE 292 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + +M L+ + S + +R + ++I YAR+R G L DQP+M +AD Sbjct: 293 EGRGIPTIIEMASYTRLNCVLGSAAILRSATVQSIAYARQRSAFGRHLADQPLMATVLAD 352 Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +AL+ A+ L+ LA +++ EA+ A+ RIM P K+W CK + + EAME G Sbjct: 353 LALESEASMQLAMHLAQAYESEAEGDLLARAWKRIMTPAAKFWVCKRSVEITGEAMEVFG 412 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG--S 478 G+GY+++ +AR +RE+P NSI GSGN M LDVL + + L QDLG + Sbjct: 413 GNGYVQDSIVARLFREAPVNSIWEGSGNVMCLDVLRAMGREPEATRLLL----QDLGDMA 468 Query: 479 SGKKVITILRDSIS--LCKEDKGL---ARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 + + ++T + S++ L + L AR L + + L + A L+R +AD F+ R Sbjct: 469 ADQPLLTAMAQSLAKRLSGSPEALEPQARRLVQDLCLLAQACLLHRHAPAHMADGFIHTR 528 Query: 534 F 534 Sbjct: 529 L 529 >gi|83720392|ref|YP_443790.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|83654217|gb|ABC38280.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis E264] Length = 546 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 184/519 (35%), Positives = 276/519 (53%), Gaps = 21/519 (4%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + + A AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI YAR+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ EAA+ RI+ P K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV---ITILRDSISLCKE 496 NSI GSGN M LDV+ + + + L L + LG ++ + LR + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALADEL-RALGGHDARIRAELDALRALLGTPPD 478 Query: 497 D-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + L R L ++IAL + A L A +++ F+ RF Sbjct: 479 ALEALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRF 517 >gi|167838409|ref|ZP_02465268.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 546 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 176/475 (37%), Positives = 260/475 (54%), Gaps = 21/475 (4%) Query: 69 TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128 TAQ+ A AN + P+L+A+ G R D+V+FHP+WHALL GL + S Sbjct: 55 TAQQ-AEDANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES----- 108 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 R AA YL Q+EAG L ++T AS+ L P + K++S +DP + Sbjct: 109 RAGRWAANAAGFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDIHDPRDA 168 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFI 244 K S+ IG+G+TEK+GG+D+ A T+ + G + L GHKWF S+PM DA + Sbjct: 169 PIDAKQSIMIGMGMTEKQGGSDVRANTTLAVPVGACGRGGEHLLRGHKWFFSAPMCDAHL 228 Query: 245 MLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 ++A+ E G CF VPR DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ Sbjct: 229 VVARTEAGGPSCFYVPRWRPDGTKNAVRVQRLKNKVGNRSNSSSEVELDDAWGVMLGEEG 288 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + +M L+ + S + +R L +AI YAR+RH G L +QP+M+ +AD+A Sbjct: 289 RGIPTIIEMATYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLA 348 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 L+ AA AL+ RLA +F+ E A+ RI+ P K+W CK A E ME GG+G Sbjct: 349 LESEAALALAMRLAQAFERG-----EPAWMRIVTPAAKFWVCKRAVEAAGEVMEVFGGNG 403 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 Y+++ IAR +RE+P NSI GSGN M LDV+ + + + L L LG ++ Sbjct: 404 YVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGHDARI 462 Query: 484 ---ITILRDSISLCKED-KGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + LR + + + L R ++IAL + A L A ++D F+ RF Sbjct: 463 RAELDALRALLGTPPDALEALGRVPAQRIALVAQACLLIDAAPAAVSDGFIATRF 517 >gi|289744395|ref|ZP_06503773.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987] gi|289684923|gb|EFD52411.1| acyl-CoA dehydrogenase fadE8 [Mycobacterium tuberculosis 02_1987] Length = 445 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/409 (37%), Positives = 226/409 (55%), Gaps = 4/409 (0%) Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 R AH +RAA+ + +E GH+ S+T A + AL + + P + SREYDP K Sbjct: 10 RPGAHVVRAAKTSVW-TVEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELK 68 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 K + G+ +TEK+GG+D+ A T+Q +DG Y L+GHKWF S+PM D F++LAQ Sbjct: 69 PATTKAGITAGMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQ 128 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + CFL+PR+L DG+ N + QRLK+K+GN +NA+ E+E+ +L+G+ Sbjct: 129 APDGLSCFLLPRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPT 188 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M L LD A+ S + MR L A+H+A+ R G LIDQP+M+ +AD+A++ A Sbjct: 189 IIEMVNLTRLDCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEA 248 Query: 369 ATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AT ++ R+A + D A + EA RI KYW CK + A AEA+EC+GG+GY+E+ Sbjct: 249 ATIVAMRMAGATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVED 308 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVIT 485 + R YRE+P I GSGN LD L + E LF L + G + + Sbjct: 309 SGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVE 368 Query: 486 ILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 LR + AR + E I LA + L R G +A+ FL R Sbjct: 369 RLRPQLGDLDTIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRL 417 >gi|319760852|ref|YP_004124789.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330822757|ref|YP_004386060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] gi|317115413|gb|ADU97901.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329308129|gb|AEB82544.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] Length = 553 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 168/476 (35%), Positives = 247/476 (51%), Gaps = 17/476 (3%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 LA AN + P+L + G R D +EFHP WHAL+ GL + + Sbjct: 58 LAEQANRHLPELRRFDSRGRRIDALEFHPGWHALMALYRGQGLVSQPFREAR-----AGR 112 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 AA YL Q+E G L ++T A++ L P + +++S YD + Sbjct: 113 WAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLQKEPALWAQLQERLYSDAYDARDLPVQD 172 Query: 193 KTSVAIGLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 K S+ +G+G+TEK+GG+D+ A T+ G G Y L GHKWF S+P DA ++ A+ Sbjct: 173 KASIWLGMGMTEKQGGSDVRANTTVATAVGAGGRGGEYLLRGHKWFFSAPQCDAHLVTAR 232 Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V+ G CF VPR DGS N + QRLK+K+GNRSNA+ E+EF + +G L+G+ Sbjct: 233 VQEGGPFACFYVPRWRPDGSRNAVRVQRLKDKLGNRSNASGEVEFEDAWGVLMGEEGRGI 292 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + +M L+ S + +R + +AI YAR+RH G L +QP+M+ +AD+AL+ Sbjct: 293 PTIIEMAGYTRLNCVAGSAAILRQATVQAIAYARQRHAFGKALAEQPLMRAVLADLALES 352 Query: 367 AAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A+ L RLA +F+ E + A+ R M P K+W CK A + EAME GG+GY+ Sbjct: 353 EASLVLLMRLAEAFEREGDGDPAQRAWKRAMTPAAKFWVCKRAVELTGEAMEVFGGNGYV 412 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485 E+ +AR +RE+P NSI GSGN M LDVL L + L + L Q ++ Sbjct: 413 EDGVMARLFREAPVNSIWEGSGNVMCLDVLRALAREPGAARALLAEL-QPAAQGEPRIAA 471 Query: 486 ILRDSISL----CKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 L+ +L E + L R L +++ L + A L +AD F+ R D Sbjct: 472 ALQGLQALLAASADELEALGRVLAQRLVLVAQACLLRAHAPACVADAFIATRLGDG 527 >gi|270265008|ref|ZP_06193271.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13] gi|270040942|gb|EFA14043.1| hypothetical protein SOD_k00440 [Serratia odorifera 4Rx13] Length = 542 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 165/437 (37%), Positives = 235/437 (53%), Gaps = 11/437 (2%) Query: 25 LNQPPLFIGMNAYSSDS-LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD+ L AL L LG+ + + + EL R+AN N P+ Sbjct: 9 FNQPKPLGNSNLFLSDTPLREALQREQAGWDADVLASLGQQLGTQESLELGRLANANPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G+R D V FHPAWH L++ I + +H W R A RAAR L Sbjct: 69 LLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGAFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T ++ L P + W + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFGAIPLLRRLLPSEFQSWLSPLLSDRYDAHLSPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKI----SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ + T+ + S Y L GHKWF S P SDA ++LAQ EG + CF + Sbjct: 185 TEKQGGSDVLSNTTTATPLTARGSGEAYRLVGHKWFFSVPQSDAHLVLAQTEGGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + +RLK+K+GNRSNA+ E+EF + +LLG+ + M L Sbjct: 245 PRILPDGTRNAIRLERLKDKLGNRSNASSEVEFQDATAWLLGEEGDGVRHILKMGGLTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR +L+ A+++ +R G LI+ P+M++ + +AL + TA RLA Sbjct: 305 DCALGSHGLMRRALSVALYHTLQRQAFGKTLIEHPMMRQVLGRMALRLEGQTAALMRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++D A E+ A R++ P K+ C+ + EAME +GG GY EE + R YRE P Sbjct: 365 AYDSADDPLEQ-ALCRVLTPAAKFEVCRQGIPFVGEAMEALGGLGYCEESELPRLYREMP 423 Query: 439 ANSILLGSGNAMVLDVL 455 NSI GSGN M LDV+ Sbjct: 424 VNSIWEGSGNIMCLDVM 440 >gi|157368687|ref|YP_001476676.1| isovaleryl CoA dehydrogenase [Serratia proteamaculans 568] gi|157320451|gb|ABV39548.1| acyl-CoA dehydrogenase domain protein [Serratia proteamaculans 568] Length = 544 Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 164/438 (37%), Positives = 238/438 (54%), Gaps = 11/438 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD+ L + + E L LG+ + + + EL R+AN N P+ Sbjct: 9 FNQPKPLGNSNLFLSDTALHEAVQREQAGWDVEVLASLGQQLGTQESLELGRLANANPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G+R D V FHPAWH L++ I + +H W R + RAAR L Sbjct: 69 LLRYDATGQRLDDVRFHPAWHILMQGLIANRVHNLPWQED----ARIGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMTT-PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T ++ L + P + W + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFGAIPLLQRSLPTEFQSWLTPLLSDRYDAHVLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ + T+ ++ Y L GHKWF S P SDA ++LAQ +G + CF + Sbjct: 185 TEKQGGSDVLSNTTTASPLAARGPGEAYRLVGHKWFFSVPQSDAHLVLAQADGGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PR+L DG+ N + +RLK+K+GNRSNA+ E+EF + +L+G+ + M L Sbjct: 245 PRILPDGTRNAIRLERLKDKLGNRSNASGEVEFQDASAWLVGEEGDGVRHILKMGGLTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR L+ A+++A +R G LI+QP+M++ +A +AL + TA RLA Sbjct: 305 DCALGSQGLMRRGLSVALYHALQRQAFGKPLIEQPMMRQVLARMALRLEGQTAALMRLAR 364 Query: 379 SFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++D + E A R+M P K+ C+ I EAME +GG GY EE + R YRE Sbjct: 365 AYDSIGVGAPLEQALCRVMTPAAKFEVCRQGIPFIGEAMEALGGIGYCEESELPRLYREM 424 Query: 438 PANSILLGSGNAMVLDVL 455 P NSI GSGN M LDV+ Sbjct: 425 PVNSIWEGSGNIMCLDVM 442 >gi|319407286|emb|CBI80927.1| acyl-CoA dehydrogenase [Bartonella sp. 1-1C] Length = 542 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 171/537 (31%), Positives = 289/537 (53%), Gaps = 22/537 (4%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + + P+ + E +G +V S A +LAR+AN + PQLH + Sbjct: 13 NAFLSDTLMFRIASTLPTSLLASFEEIGAFVASDEAWDLARLANSHRPQLHYNNRWKQSK 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 ++++ HP++H L R S GL S+W+ + E VR QA RA RL L+A LE GHL Sbjct: 73 EELDIHPSYHTLQRYSRQAGLVSSLWESATSENGVRYQA---RAIRLALLAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT--------EK 205 +V SA++ L+ + K W + SR+YD ++K K IG LT + Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNK----IGASLTCAFDNIEESE 185 Query: 206 RGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 + + A+ S +K+ +Y L+ K + +PM+D +I+ A+++G + CFL+PRL E Sbjct: 186 KYTFNFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQE 245 Query: 264 DGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 +G NG R L + G S +EF G+LLG++ ++D++ ++ D AI Sbjct: 246 NGLLNGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAI 305 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 +S +R +L +I + R++ + P+ +R ADIALDIAA+ AL RLA +FD Sbjct: 306 ISAGVLRSALQLSIDFLRKKMPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDN 362 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A EAA+ARIM PI ++ ++ E + +G + + + + R+SPA + Sbjct: 363 AVDNRSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIV 422 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 N +V D + + +K LF+QL + D+G +G + I I++ ++++ ++G R Sbjct: 423 KNSGMNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGR 482 Query: 503 FLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 F E++A AS++AAL + I + ++E+R S++ ML R+N ++D LY Sbjct: 483 FFVEQMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539 >gi|84687411|ref|ZP_01015289.1| putative acyl-CoA dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84664569|gb|EAQ11055.1| putative acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 537 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 163/459 (35%), Positives = 251/459 (54%), Gaps = 13/459 (2%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 A N P+L + G R D+V FHP +H +++ + G WD + H Sbjct: 66 ARANPPELKLFDRAGRRLDEVHFHPGYHEVMQAGMAAGYAALAWDGA------PGGHATH 119 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 AA +Y+++Q+E G ++T A++ AL P + WAPK+ EYDP+ +K + Sbjct: 120 AAMVYMLSQVEPGICCPLTMTYAAVPALAADPALEAVWAPKLTGTEYDPSIAPVGRKRAA 179 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 +G+ +TEK+GG+D+ A T++ + + G++ L+GHKWF S+PMSD F+ LA E + CF Sbjct: 180 TMGMAMTEKQGGSDVRANTTRAEP-AGGMWRLTGHKWFCSAPMSDGFLTLAYTEAGLTCF 238 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVPR ++G N + QRLK+K+GNR+NA+ E+E+ LG+ + +M Sbjct: 239 LVPRWTDEGR-NPIQIQRLKDKLGNRANASSEIEYHGALAHKLGEDGRGVATIIEMVHHT 297 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 LD+A+ MR +L EA H+ R LIDQP+M+ +AD+AL+ A AL R Sbjct: 298 RLDTAMAPAGLMRAALVEAKHWVEGRSAFQKRLIDQPLMRSVLADLALEWEGALALGMRA 357 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +FD E+ A+ARI + K+ K VI EAMEC+GG GY+EE + YRE Sbjct: 358 ARAFD--GDAPEDRAFARISVALAKFLSNKRCGPVILEAMECLGGMGYVEETPMPMLYRE 415 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSISLC 494 +P NSI GSGN + LD+L L + L + LE G+ + + D Sbjct: 416 APLNSIWEGSGNVICLDILRTLAREPMAGAALRAELEAATGADRRYDAALAAHFDRWPAL 475 Query: 495 KEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 E+ G AR+ E++A+ +A+ L RAG ++D ++ + Sbjct: 476 PEE-GEARWFAERLAVLLAASVLLRAGNAAVSDGWIATK 513 >gi|319404281|emb|CBI77874.1| acyl-CoA dehydrogenase [Bartonella rochalimae ATCC BAA-1498] Length = 542 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 167/533 (31%), Positives = 288/533 (54%), Gaps = 14/533 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + + P+ + E +G +V S A +LAR+AN + P+LH + Sbjct: 13 NAFLSDTLMFRIASTLPTSLLASFEEIGTFVASDEAWDLARLANSHRPRLHYNNRWKQSK 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 ++++ HP++H L R S GL S+W+ + E VR QA RA RL L+A LE GHL Sbjct: 73 EELDIHPSYHNLQRYSRQAGLVSSLWESATSENGVRYQA---RAIRLALLAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209 +V SA++ L+ + K W + SR+YD ++K KT ++ ++ Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSKPIDNKTGASLTCAFDNIEESEKYTF 189 Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 + A+ S +K+ +Y L+ K + +PM+D +I+ A+++G + CFL+PRL E+G Sbjct: 190 NFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRLQENGLL 249 Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG R L + G S +EF G+LLG++ ++D++ ++ D AI+S Sbjct: 250 NGTILIRYLIQRSGECSAPEGVIEFRGCCGWLLGNVGEGAKVIKDIETMMRFDQAIISAG 309 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 +R +L +I + R++ + P+ +R ADIALDIAA+ AL RLA +FD A Sbjct: 310 VLRSALQFSIDFLRKKMPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAVDN 366 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EAA+ARIM PI ++ ++ E + +G + + + + R+SPA + Sbjct: 367 RSEAAFARIMTPIIACHVSQLVIPIVGEIIAQVGIESFTDSNPLLQILRDSPARIVKNSG 426 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 N +V D + + +K LF+QL + D+G +G + I I++ ++++ ++G RF E Sbjct: 427 MNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASTNEGAGRFFVE 486 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 ++A AS++AAL + I + ++E+R S++ ML R+N ++D LY Sbjct: 487 QMAYASASAALRYTEVEYIVNAYMESRLGGQWRSSYGMLIARYNPTQLLDILY 539 >gi|319405724|emb|CBI79347.1| acyl-CoA dehydrogenase [Bartonella sp. AR 15-3] Length = 542 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 162/533 (30%), Positives = 289/533 (54%), Gaps = 14/533 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + + P+ + E +G +V S A +LAR+AN + P LH + Sbjct: 13 NAFLSDTLMFRIASTLPTSLLPSFEEIGAFVASDEAWDLARLANSHRPTLHYNNRWRQSK 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSF-EPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 ++++ HP++H L R S GL S+W+ + E VR QA RA RL L+A LE GHL Sbjct: 73 EELDIHPSYHTLQRYSRQAGLVSSLWENTTSENGVRYQA---RAIRLALLAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209 +V SA++ L+ + K W + SR+YD ++++ K ++ ++ Sbjct: 130 ITVASAAIAVLIGDIELFKKWQDALLSRQYDLSSRSIENKRGASLTCAFDNIEESEKYTF 189 Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 + A+ S +K+ +Y L+ K + +PM+D +I+ A+++G + CFL+PR+ E+G Sbjct: 190 NFPAVQRISFDEKMGRDLYRLNIIKTNVVNPMADGYIVSAEIDGLLSCFLIPRIQENGLL 249 Query: 268 NGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG+ R L + G S +EF +G+L+G++ ++D++ ++ D AI+S Sbjct: 250 NGVILTRYLIQRSGEYSAPEGVIEFRGCYGWLVGNIGEGAKVIKDIETMMRFDQAIISAG 309 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 +R +L +I + R++ + P+ +R ADIALDIAA+ AL RLA +FD A Sbjct: 310 VLRSALQFSIDFLRKQTPNQPF---PPLTERIFADIALDIAASQALVMRLARAFDNAADN 366 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EAA+ARIM PI ++ +I E + +G + + + + R+SPA + Sbjct: 367 RSEAAFARIMTPIVACHVSQLVIPIIGEIIAQVGIVSFTDSNPLLQILRDSPARIVKNSG 426 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 N +V D + + +K LF+QL + D+G +G + I I++ ++++ ++G RF E Sbjct: 427 VNQLVRDAILIGDKAPGLFQQLLEKIAADIGQAGPRAIEIIKSAVNMASVNEGAGRFFVE 486 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 ++A AS++AAL + + + ++E+R S++ ML R++ ++D LY Sbjct: 487 QMAYASASAALRYTEVEHVVNAYMESRLGGQWRSSYGMLIARYSPTQLLDVLY 539 >gi|149913850|ref|ZP_01902382.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b] gi|149812134|gb|EDM71965.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b] Length = 543 Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 165/468 (35%), Positives = 248/468 (52%), Gaps = 17/468 (3%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 QE AN + P+L A+ GG R D+V +HP +H LL + G W+ Sbjct: 61 QEAGIQANRHPPELLAFDAGGRRLDEVRYHPDYHRLLETGLSAGYAAIPWEGG------A 114 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 H AA +YL Q+E G ++T A++ AL + W PK+ +R YD + Sbjct: 115 GGHATHAAMVYLTTQIEPGVCCPMTMTYAAVPALKADADLFAAWVPKLIARAYDGAVRPM 174 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV 249 +K + +G+ +TEK+GG+D+ A ++ + DG + L+GHKWF S+PMSD F+ LAQ Sbjct: 175 ARKPGLTMGMAMTEKQGGSDLRATVTR--AVPDGDAHRLTGHKWFCSAPMSDGFLTLAQA 232 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G + CF+VPR L+ G N + QRLK+K+GNR+NA+ E+E+ + LG + Sbjct: 233 PGGLTCFVVPRWLDHGR-NAIRLQRLKDKLGNRANASAEIEYDGALAYRLGPEGEGIRTI 291 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M LD+A+ MR +L A H+AR R LIDQP+M+ +AD+ALD Sbjct: 292 IEMVHHARLDTAMAPAGLMRAALDRAAHWARHRSAFDARLIDQPLMRAVLADLALDWEGT 351 Query: 370 TALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AL R+A +FD S SE E A+AR+ + KY K+ P ++ EAME IGG+GY+E+ Sbjct: 352 LALGLRVARAFD---SPSEPERAFARLAVALAKYLGNKLCPGLVYEAMEAIGGAGYVEDS 408 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488 + YRE+P N I GSGN + LD+L L + E L + L G ++ LR Sbjct: 409 GLPLFYREAPLNGIWEGSGNVICLDILRTLRRAPLAGEVLSAELGAVSGQY-RRYDAALR 467 Query: 489 DSISLCKE--DKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + + D AR+ E + +A+ L + IA+ ++ R Sbjct: 468 AHMDRFPKLPDPREARWYAESLGSLLTASVLMQNAPPAIAEAYIATRL 515 >gi|329890652|ref|ZP_08268995.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] gi|328845953|gb|EGF95517.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] Length = 538 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 168/457 (36%), Positives = 242/457 (52%), Gaps = 15/457 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQL 84 NQ P ++ ++ D L + ++ H E L LG S + AN P L Sbjct: 17 NQVPPLEDVDLFTGDRALHDAVRHWGGAGHVERLSDLGRRCGSAEVIDWGVQANRVPPVL 76 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + G R D+V FHPA+H L+ + G+ WD + H + AA L+L Sbjct: 77 DTHDRYGRRIDEVTFHPAYHQLMDLGLGAGIAAGAWDGT------PNGHLLHAAILFLTG 130 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q ++G ++T AS+ AL P V + W + S YDP + +K V IG+ +TE Sbjct: 131 QADSGTSCPMTMTYASVAALQADPAVGEPWIGGVLSGRYDPAVRPASEKAGVTIGMAMTE 190 Query: 205 KRGGTDIAAITSQGQKIS-DGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLE 263 K+GG+D+ A T++ + I DG Y L+GHKWF S+PM DAF+ LA G + CF++PR L Sbjct: 191 KQGGSDVRANTTRAEPIGEDGWYSLTGHKWFCSAPMCDAFLTLAYAPGGLTCFILPRWLP 250 Query: 264 DGSPN-GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 DG+ N G RLK+K+G+RSNA+ E+E+ LG+ + M LD + Sbjct: 251 DGTRNAGFRVMRLKDKMGDRSNASSEVEYHGALAQRLGEEGRGVATIIRMVQHTRLDCVV 310 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S MR +LA+A +A R LIDQP+M + D+A++ AATALS RLA +FD Sbjct: 311 GSALQMRGALAQAAWHAAHRTAFQKRLIDQPMMAAVLTDLAVESEAATALSMRLAATFDA 370 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + A R++ P+ KYW CK AP ++ EAME +GG+GY+E + R +R+SP N+I Sbjct: 371 ------DDAVGRLLTPVAKYWVCKRAPNLVYEAMEALGGAGYVETGPMPRLFRQSPLNAI 424 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GSGN + LDVL + E L L G S Sbjct: 425 WEGSGNVIALDVLRAAGREPEAVEALRDWLASQAGKS 461 >gi|326315001|ref|YP_004232673.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371837|gb|ADX44106.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 555 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 183/496 (36%), Positives = 261/496 (52%), Gaps = 24/496 (4%) Query: 58 LELLGEYVL---SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114 L LGEY S Q LA++AN +TP LH + G R D+VEFHPAW AL+ G Sbjct: 40 LPALGEYARRLGSAETQALAQLANRHTPTLHRFDSRGRRIDRVEFHPAWDALMALYRGQG 99 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDW 174 L +D AA YL Q+E G L ++T A++ L P + Sbjct: 100 LVSMPFDSDR-----AGRWAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWAQL 154 Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ----GQKISDGIYCLSG 230 ++ SR +DP +K + +G+G+TEK+GG+D+ A T+ G G Y L G Sbjct: 155 GDRLHSRTHDPRELPAHEKAGIWLGMGMTEKQGGSDVRANTTVAMPLGAGGRGGEYRLRG 214 Query: 231 HKWFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 HKWF S+P SDA +++A+ G CF VPR L DG+ NG+ QRLK+K+GNRSNA+ E Sbjct: 215 HKWFFSTPQSDAHLVVARTGEGGPFACFYVPRRLPDGTLNGVHVQRLKDKVGNRSNASGE 274 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 +EF + +G L+G+ + +M L+ S + +R + +AI YARRRH G Sbjct: 275 VEFDDAWGVLMGEEGRGIPTIIEMATYTRLNCVAGSAAILRQATVQAIAYARRRHAFGKA 334 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYWCC 405 L QP+M+ +AD+AL+ AA AL RLA +F D + + A+ R+M P K+W C Sbjct: 335 LAAQPLMRTVLADLALESEAALALLMRLAEAFERDDGGTASPADRAWKRVMTPAAKFWVC 394 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 K + EAME GG+GY++E +AR + E+P NSI GSGN M LDVL L + Sbjct: 395 KRGVEMSGEAMEVFGGNGYVQEGVMARLFLEAPVNSIWEGSGNVMCLDVLRALARDPEAA 454 Query: 466 EQLFSTLEQDLGSSGKKVITI-LRDSISLCKED----KGLARFLTEKIALASSAAALYRA 520 L L + G+ I + LR+ +L + L R L +++ L + A L R Sbjct: 455 HALLEELAP--AAQGEPRIAVALRELQALLARPPEALEALGRLLVQRLVLLAQACLLRRH 512 Query: 521 GMNDIADVFLENRFLD 536 +AD F+ R D Sbjct: 513 APAAVADAFIATRLSD 528 >gi|167564599|ref|ZP_02357515.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis EO147] Length = 471 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 173/461 (37%), Positives = 254/461 (55%), Gaps = 21/461 (4%) Query: 69 TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128 TAQ+ A AN + P+L+A+ G R D+V+FHP+WHALL GL S+ R Sbjct: 21 TAQQ-AEDANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYRGQGL-ISLAFRD----A 74 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 R AA YL Q+EAG L ++T A + L P + K++S +DP + Sbjct: 75 RAGRWAANAAGFYLHGQIEAGTLCPATMTQAGIPVLQKEPALWAQLKDKLYSDVHDPRDV 134 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMSDAFI 244 K S+ +G+G+TEK+GG+D+ A T+ + G Y L GHKWF S+PM DA + Sbjct: 135 PIDAKQSITLGMGMTEKQGGSDVRANTTVAAPVGAGGRGGDYLLRGHKWFFSAPMCDAHL 194 Query: 245 MLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 ++A+ E G CF VPR DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ Sbjct: 195 IVARTESGGPSCFYVPRWRPDGTKNAVLIQRLKNKVGNRSNSSSEVELDDAWGVMLGEEG 254 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + +M L+ + S + +R L +AI YAR+RH G L +QP+M+ +AD+A Sbjct: 255 RGIPTIIEMANYTRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLA 314 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 L+ AA AL+ RLA +F+ E A+ RI+ P K+W CK A E ME GG+G Sbjct: 315 LESEAALALAMRLAQAFERG-----EPAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNG 369 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 Y+++ IAR +RE+P NSI GSGN M LDV+ + + + L L LG ++ Sbjct: 370 YVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALVDELHA-LGGRDARI 428 Query: 484 ---ITILRDSISLCKEDK-GLARFLTEKIALASSAAALYRA 520 + LR + + + L R L ++IAL + A L A Sbjct: 429 RAELDALRALLGTPPDAREALGRVLAQRIALVAQACLLLDA 469 >gi|167721801|ref|ZP_02405037.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98] Length = 471 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDTHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 NSI GSGN M LDV+ + + + L L Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 452 >gi|167913110|ref|ZP_02500201.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 112] Length = 475 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 3 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 62 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 63 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 117 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 118 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 177 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 178 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 237 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 238 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 297 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 298 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 357 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 358 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 412 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 NSI GSGN M LDV+ + + + L L Sbjct: 413 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 445 >gi|167817992|ref|ZP_02449672.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 91] Length = 469 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 169/453 (37%), Positives = 245/453 (54%), Gaps = 16/453 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + LA AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGTRDIARLAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDAHDPRDAPIGAKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ G G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGAGGRGGEHLLRGHKWFFSAPMCDAHLVVARTEAGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI Y R+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYTRQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ E A+ RI+AP K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EPAWTRIVAPAAKFWVCKRAVEAAGEVMEIFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 NSI GSGN M LDV+ + + + L L Sbjct: 420 NSIWEGSGNVMCLDVMRAISREPDAAHALIDEL 452 >gi|167620959|ref|ZP_02389590.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis Bt4] Length = 477 Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 166/441 (37%), Positives = 243/441 (55%), Gaps = 16/441 (3%) Query: 26 NQPPLFIGMNAYSSDSLL-VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ N +++D L AL S L+ G + + + A AN + P+L Sbjct: 10 NQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPEL 69 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 +A+ G R D+V+FHP+WHALL GL + S R AA YL Sbjct: 70 NAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRES-----RAGRWAANAAGFYLHG 124 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q+EAG L ++T AS+ L P + K++S +DP + K S+ IG+G+TE Sbjct: 125 QIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGMGMTE 184 Query: 205 KRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 K+GG+D+ A T+ + G + L GHKWF S+PM DA +++A+ E G CF VP Sbjct: 185 KQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCFYVP 244 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R DG+ N + QRLKNK+GNRSN++ E+E + +G +LG+ + +M L+ Sbjct: 245 RWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLN 304 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S + +R L +AI YAR+RH G L +QP+M+ +AD+AL+ AA AL+ RLA + Sbjct: 305 CVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQA 364 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 F+ EAA+ RI+ P K+W CK A E ME GG+GY+++ IAR +RE+P Sbjct: 365 FERG-----EAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPV 419 Query: 440 NSILLGSGNAMVLDVLNLLEK 460 NSI GSGN M LDV+ + + Sbjct: 420 NSIWEGSGNVMCLDVMRAISR 440 >gi|312115085|ref|YP_004012681.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311220214|gb|ADP71582.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 549 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 173/458 (37%), Positives = 250/458 (54%), Gaps = 12/458 (2%) Query: 20 DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSVVHKELELLGEYVLSCTAQELARMAN 78 D+ N PP F G+N Y +D +L A + V L LG S A + AN Sbjct: 11 DTHDVTNMPPPFGGLNLYETDIALKEAAGLHGGEWVDGPLSALGAAAGSDEALQAGEDAN 70 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 P+L + G R D+V FHPA+H + ++ +H W R AH AA Sbjct: 71 RYLPELRTFDRFGGRIDEVRFHPAYHQCMALAMEHRIHSIGWREK-----RPGAHVAHAA 125 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 L + +Q EAG + S+T AS+ AL P V W PKI Y+ + +K V I Sbjct: 126 ALAIGSQAEAGTMCPMSMTYASVAALRKQPDVAAAWLPKIVDGVYEAPLRPIAEKRGVTI 185 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 G+ +TEK+GG+D+ + +++ + G Y L+GHKWF S+PMSDAF+ LA + + Sbjct: 186 GMFMTEKQGGSDVRSNSTRAVPVGAGGPGGEYLLTGHKWFCSAPMSDAFLTLAYTDRGLS 245 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFL PR+ D + N + RLK K+GNRSNA+ E E+ +TF +++G+ + DM Sbjct: 246 CFLAPRIKPDSTRNSMNLMRLKEKLGNRSNASAEFEYKDTFAWMIGEDGRGVATIMDMVH 305 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 LD+ S+ MR +LAEA H+AR R LIDQPVM+ +AD+ALD AA + Sbjct: 306 HTRLDTTAGSLGIMRRALAEAAHHARHRRAFQKTLIDQPVMRAVLADLALDYEAAAMFTM 365 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R+A ++D + EE +AR+ + K++ K +AE MEC+GG GYIEE + AR+Y Sbjct: 366 RIARAYD--GTTPEERGFARLGVALGKFYIAKRTAPFVAECMECLGGGGYIEEAATARYY 423 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 RE+P N+I GSGN + LD+L L+K + L + L Sbjct: 424 REAPVNAIWEGSGNVIALDILRTLQKEPLALDGLLAEL 461 >gi|49474242|ref|YP_032284.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse] gi|49239746|emb|CAF26128.1| Acyl-CoA dehydrogenase [Bartonella quintana str. Toulouse] Length = 598 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 166/562 (29%), Positives = 300/562 (53%), Gaps = 18/562 (3%) Query: 6 IYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYV 65 +Y +N + P ++FA N NA+ SD+L+ + + P+ + E +G++V Sbjct: 44 VYDMNNLNNRNMPMSAVFAQNVRR----KNAFLSDTLMFRIASTLPTFLLASFEEIGDFV 99 Query: 66 LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF- 124 S A EL+ +AN P L G +K+E H ++ AL + + GL S+W+ + Sbjct: 100 ASREAWELSYLANRYRPVLRYNNEWGRPTEKLEIHSSYQALQQYARQIGLVTSLWENTTS 159 Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYD 184 E VR QA RA RL L A LE GHL +TSA + L++ + K W + SR+YD Sbjct: 160 ENGVRYQA---RAIRLALSASLETGHLNEIVITSAVIAVLISDIELFKKWQNVLLSRQYD 216 Query: 185 PTNKAPMQKTSVAIGLGLTE----KRGGTDIAAIT--SQGQKISDGIYCLSGHKWFLSSP 238 ++K +K + ++ + ++ + + S +K+ +Y L+ K + +P Sbjct: 217 LSSKPVNRKKAASLTCAFDDVEKYEKHSFNFQNVKKISFDEKMGRDLYRLNVVKTNVINP 276 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGF 297 + D +++ A+++G + CF VPR+ E+G+ NG + + L + G S ++F ++G+ Sbjct: 277 IVDGYLVSAELDGHLSCFFVPRMQENGTLNGSISIRHLVQRSGEVSAPEGVVDFQGSYGW 336 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 LLG+ ++D++ ++ D +++S +R +L I + R++ + + P+ +R Sbjct: 337 LLGNAGEGLKVIKDIETMMRFDQSVISAGVLRAALQFGIDFFRQKMPNQPL---PPLTER 393 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 ADIALDIAA+ L RLA +FD A + EAA+ARIM PI Y ++A +I E + Sbjct: 394 IFADIALDIAASQVLVLRLARAFDNAANDHSEAAFARIMTPIIAYHVSQLAVPIIGEIIA 453 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 +G +IE +++ PA I S N +V D + + EK LF++L + D+G Sbjct: 454 QVGIESFIEGNPLSQILCNGPARIIRNTSANQLVKDAILIAEKAPGLFQKLLEKIAIDIG 513 Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDN 537 +G + + I+R ++ + ++G RF E++A A++AA+L + +A+ ++E+R Sbjct: 514 PAGPRAVEIIRSAVEMASANEGAGRFFIEQVAYAAAAASLRSTKIEHVANAYMESRLGGQ 573 Query: 538 CHSTHCMLHGRFNAAHIIDSLY 559 S++ ML R+NA H+++ LY Sbjct: 574 WRSSYGMLIARYNAGHLLNVLY 595 >gi|319408538|emb|CBI82191.1| acyl-CoA dehydrogenase [Bartonella schoenbuchensis R1] Length = 541 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 155/532 (29%), Positives = 286/532 (53%), Gaps = 13/532 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + +N P+ + E +G +V S A++L+R+AN++ P L + Sbjct: 13 NAFLSDTLMFRIASNLPASLLASFEEIGAFVASHEARDLSRLANHHRPILRYNTEWSQLT 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 +++E HPA+ L R S GL S+W+ + E +R QA RA RL L A LE GHL Sbjct: 73 EQLEIHPAYDTLQRYSRQVGLSTSLWENIASESGIRYQA---RAIRLALSAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----GLGLTEKRGG 208 +TSA++ L+ ++ K W + SR+YD + K K ++ + +EK Sbjct: 130 VIITSAAIAVLIGDIKLFKRWRNVLLSRQYDSSLKPIDDKKGASLTCAFDNVAKSEKYPS 189 Query: 209 T-DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 + IA S +K+ +Y L+ K + +P++D +++ A+++G + CFLVPR+ E+G+ Sbjct: 190 SFPIAQKVSFDEKMGRDLYHLNSVKTNVINPVADGYLVSAEIDGHLSCFLVPRVQENGAI 249 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N + L + G S + F ++G+LLG++ ++D++ + D +++S Sbjct: 250 NNISIHYLLQRSGEYSVPEGVVHFQGSYGWLLGNIGEGAKIIKDIETMTRFDQSVISTGV 309 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +R +L I + R++ + + P+ +R ADIALDIAA+ AL RLA +FD A + Sbjct: 310 LRAALQFGIDFFRQKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNATNSR 366 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 EAA+ARIM PI ++ +++E + +G ++E +++ + A + Sbjct: 367 AEAAFARIMTPIIACHVNQLVVPIVSEIIAQLGLESFVEGNPLSQMLHDGSARIVRNNDS 426 Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507 N +V D + + K LF+QL + ++GS+G + + I++ +I + ++G RF E+ Sbjct: 427 NQLVRDAILIANKAPGLFQQLLEKIATNIGSAGPRAVEIIKSAIHMASTNEGAGRFFVEQ 486 Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 +A A++ A+L M I + ++E+R ++ M+ R+N +++ LY Sbjct: 487 VAYAAATASLRYKEMEYIVNAYMESRLGGQWRLSYGMMIARYNPGQLLEILY 538 >gi|333007687|gb|EGK27164.1| protein aidB [Shigella flexneri VA-6] Length = 405 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/374 (37%), Positives = 210/374 (56%), Gaps = 1/374 (0%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A+ + L P +DW + S YD QK + IG+G+TEK+GG+D+ + T + Sbjct: 4 AATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTIR 63 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +++ DG Y L GHKWF S P SDA ++LAQ G + CF VPR L DG N + +RLK+ Sbjct: 64 AERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLERLKD 123 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+GNRSNA+ E+EF + G+LLG + M + D A+ S + MR + + AI+ Sbjct: 124 KLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIY 183 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 +A +RHV G LI QP+M+ ++ +AL + TAL FRLA ++D ++ ++EA +AR+ Sbjct: 184 HAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDR-RADAKEALWARLFT 242 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 P K+ CK +AEAME +GG GY EE + R YRE P NSI GSGN M LDVL + Sbjct: 243 PAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRV 302 Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 L K +++ L + G + R L K + L R +T ++ L A + Sbjct: 303 LNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQM 362 Query: 518 YRAGMNDIADVFLE 531 + +A + + Sbjct: 363 LKYASPPMAQAWCQ 376 >gi|254465120|ref|ZP_05078531.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium Y4I] gi|206686028|gb|EDZ46510.1| acyl-CoA dehydrogenase domain protein [Rhodobacterales bacterium Y4I] Length = 544 Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 172/511 (33%), Positives = 265/511 (51%), Gaps = 14/511 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH 85 NQP G + ++ D+ L + A+ + L L G S T E A A + P+L Sbjct: 20 NQPQPRGGRDLWAEDAALRSYAAHHGGRM-DALALAGAEYGSETLLEAAAEARRDPPRLE 78 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+V F+ +H ++ + G + WD + H AA +Y++ Q Sbjct: 79 LFSRSGRRLDEVRFNAGYHQVMAAAQRLGYAHAAWDGA------PGGHVTHAAHVYMLNQ 132 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +E G ++T A++ AL P + W PK+ S EYDP + K +G+ +TEK Sbjct: 133 VEPGVCCPMTMTYAAIPALRHAPDLAALWHPKLLSAEYDPAVRPVAHKRGATLGMAMTEK 192 Query: 206 RGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 +GG+D+ A T++ + DG Y L+GHKWF S+PMSD F+ LA EG + CFLVPR LE+ Sbjct: 193 QGGSDVRANTTR--AVRDGAHYRLTGHKWFCSAPMSDGFLTLAYAEGGLTCFLVPRWLEE 250 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G NG+ QRLK+K+GNR+NA+ E+E++ + +G+ + +M LD+A+ Sbjct: 251 GR-NGIRLQRLKDKLGNRANASSEIEYAEALAYRVGEEGAGVRTIIEMVHHTRLDTALAP 309 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 MR +LAEA +A R +LI QP+M+ +AD+ LD A A +A +FD + Sbjct: 310 AGLMRAALAEAFWWAEERAAFQRMLIGQPLMRAVLADLVLDAEGALAAGMAMAAAFD--R 367 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + ++ A ARI + KY K VI EAME +GG GY+EE + YRE+P N I Sbjct: 368 TDADSRALARIGVALAKYLGNKRCIPVIGEAMEVLGGMGYVEETPMPMLYREAPLNGIWE 427 Query: 445 GSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK-EDKGLARF 503 GSGN + LD+L L++ L + L+ G + + D+ AR+ Sbjct: 428 GSGNVICLDILRTLDREPRAAAALNALLDGARGGDRRYDAGLAAHRARWPGLPDEAEARW 487 Query: 504 LTEKIALASSAAALYRAGMNDIADVFLENRF 534 E +A +AA L A +A+ ++ +R Sbjct: 488 FAESLATLMTAACLLDAAPAAVAEGYVTSRI 518 >gi|326403007|ref|YP_004283088.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|325049868|dbj|BAJ80206.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 547 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 166/436 (38%), Positives = 243/436 (55%), Gaps = 10/436 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +PP +A++ D+ L+ ++ F + L +G + S + LAR AN N P+L Sbjct: 12 GEPP---AHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANRNPPEL 68 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ G R D+V FHPAWH L+ D H W EP R AH RAA YL Sbjct: 69 AAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWT---EP--RPGAHVARAAVAYLWG 123 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T A+ AL P + + +I + YDP P +K ++ + + +TE Sbjct: 124 QGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKPALGVAMAMTE 183 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + + D + L+GHKWF S P SD F+ LA+ + CFL +D Sbjct: 184 KQGGSDLRQTRTTATRAGDS-WRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQGWRDD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N + QRLK+K+GNRSNA+ E+EF ++G + +M L L+ A+ + Sbjct: 243 GSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLECALGA 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR + + A+H+A R LIDQP+M+ +AD+AL+ AA L+ R A + D A Sbjct: 303 AALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAATDAAA 362 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE IAR YRE+P N + Sbjct: 363 RNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPLNGVWE 422 Query: 445 GSGNAMVLDVLNLLEK 460 G+GN + LDVL L + Sbjct: 423 GAGNVICLDVLRALTR 438 >gi|163868298|ref|YP_001609507.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476] gi|161017954|emb|CAK01512.1| acyl-CoA dehydrogenase [Bartonella tribocorum CIP 105476] Length = 539 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 157/530 (29%), Positives = 282/530 (53%), Gaps = 11/530 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 N + SD+L+ + + P + E +G++ S A L+ AN+ P L G++ Sbjct: 13 NTFLSDTLMFRIASTLPKSLLASFEEIGDFAASQEAWNLSCSANHYKPLLRYNDKWGKQA 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 +K+E H ++ L + S GL S+W+ S E VR QA RA RL L A LE GHL Sbjct: 73 EKLEIHSSYQDLQQYSRRAGLVTSLWENTSLENGVRYQA---RAIRLALSAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT-DIA 212 ++TSA++ L++ + K W + SR+YD +++ K S ++ + T + Sbjct: 130 VTITSAAIAVLISDSELFKKWQNVLLSRQYDSSSRPIHHKNSASLTCAFDDIEQHTFNFP 189 Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270 ++ S + + +Y L+ K + +P +D +++ A + G + CF VPR+ E+G+ NG Sbjct: 190 SVKKISFDENMQRDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFVPRIQENGAFNGF 249 Query: 271 CYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 R L + G ++F +G+LLG+ ++D++ ++ D +++S +R Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGCYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L I + R++ + + P+ +R ADIALDIAA+ AL RLA +FD A + E Sbjct: 310 AALQFGIDFFRKKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA+ARIM PI Y ++ +I E + +G +IE +++ PA ++ S N Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARTVRNSSANQ 426 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 +V D + + EK LF++L + D+G +G + I I++ + + ++G RF E++A Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486 Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 A++AA+L+ + +A+ ++E+R S++ ML R+NA H+++ LY Sbjct: 487 YAAAAASLHSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536 >gi|148260040|ref|YP_001234167.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|146401721|gb|ABQ30248.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5] Length = 547 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 166/436 (38%), Positives = 243/436 (55%), Gaps = 10/436 (2%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 +PP +A++ D+ L+ ++ F + L +G + S + LAR AN N P+L Sbjct: 12 GEPP---AHDAFTGDAALLEAVSAFGAGWAAPHLAAVGARIGSPELRALAREANRNPPEL 68 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 A+ G R D+V FHPAWH L+ D H W EP R AH RAA YL Sbjct: 69 AAFDRFGHRIDEVAFHPAWHRLMGMIRADRFHSLAWT---EP--RPGAHVARAAVAYLWG 123 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q E G ++T A+ AL P + + +I + YDP P +K+++ + + +TE Sbjct: 124 QGEPGVCCPAAMTFAATAALAHAPDLLARFRDRILAPGYDPRPLPPAEKSALGVAMAMTE 183 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 K+GG+D+ + D + L+GHKWF S P SD F+ LA+ + CFL +D Sbjct: 184 KQGGSDLRQTRTTATHAGDS-WRLTGHKWFFSVPTSDLFLTLARTGETISCFLAQGWRDD 242 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GS N + QRLK+K+GNRSNA+ E+EF ++G + +M L L+ A+ + Sbjct: 243 GSRNAVRIQRLKDKLGNRSNASSEVEFDGLEAVMVGAEGRGIATIIEMAHLTRLECALGA 302 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + MR + + A+H+A R LIDQP+M+ +AD+AL+ AA L+ R A + D A Sbjct: 303 AALMRQATSLALHHAAHRRAFQRALIDQPLMRAVLADMALEAEAALWLALRAAAATDAAA 362 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 EAA ARI+ P+ KYW CK APA++AEA+EC GG+G++EE IAR YRE+P N + Sbjct: 363 HNPAEAALARIIVPVAKYWTCKRAPALLAEALECHGGNGFVEEHPIARLYREAPLNGVWE 422 Query: 445 GSGNAMVLDVLNLLEK 460 G+GN + LDVL L + Sbjct: 423 GAGNVICLDVLRALTR 438 >gi|258654546|ref|YP_003203702.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557771|gb|ACV80713.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM 44233] Length = 542 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/390 (38%), Positives = 218/390 (55%), Gaps = 7/390 (1%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E AR+A+ N P LH + G R D++E+HP+WH L+ R++ GL + W P Sbjct: 55 EQARLADRNPPVLHTHDRAGRRVDEIEYHPSWHRLMGRAVGAGLQAAPW----APDAGAH 110 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 AH RAA YL Q E+GHL S+T A++ AL + +++ P + S EYD + Sbjct: 111 AHLHRAAGFYLWTQTESGHLCPISMTYAAVPALRHDADLAREFEPGLCSPEYDFGLRPAA 170 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPMSDAFIMLAQVE 250 K + G+ +TEK+GG+D+ A T++ D G Y L+GHKWF S+PM+D F+ LAQ Sbjct: 171 AKRGLLAGMSMTEKQGGSDVRAATTRAVPEGDAGHYRLTGHKWFTSAPMNDLFLTLAQAP 230 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CF+VPR+L DG N + RLK+K+GNRSNA+ E+E+ LG+ + Sbjct: 231 GGLSCFVVPRVLPDGQRNAVSVLRLKDKLGNRSNASGEIEYDGALARRLGEEGRGVPTIL 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +M + LD + S +R L++A +YA R G LI+ M +AD+A++ AAT Sbjct: 291 EMVTMTRLDCVLGSAGQIRAGLSQAAYYAAHRRAFGRRLIEHEAMAAVLADLAVESWAAT 350 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 RLA+ D+ + + A K+W CK A V+AEA+EC+GG+GY+E Sbjct: 351 LTGLRLADLVDDRSPAAATLLRLALPA--AKFWICKRAVPVLAEALECLGGNGYVETFPT 408 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 AR RE+P N I GSG LD + L + Sbjct: 409 ARLLREAPLNGIWEGSGTVTALDAVRALGR 438 >gi|284044149|ref|YP_003394489.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283948370|gb|ADB51114.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 545 Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 177/528 (33%), Positives = 257/528 (48%), Gaps = 43/528 (8%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSV--VHKELELLGEYVLSCTAQELARMANYNTP 82 LNQ P + ++ +S+D+ L + V + E+ G V S A E R A N P Sbjct: 14 LNQAPPLLPLDLFSTDAPLREALEREGGAWGVDRAREV-GTIVGSVEAHEHGRRAERNEP 72 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L + G R D VE P+WH LLR +I +H W R AH +RAA + L Sbjct: 73 RLMTHDRYGNRIDAVELDPSWHWLLRGAIEREIHALPWREQ-----RDGAHAVRAALMML 127 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 G L S+T A++ AL +D AP+I + E++P P + G+ + Sbjct: 128 WGNANGGVLCPVSMTYAAIPAL-------RDGAPEI-AVEWEPRLTLPDYERGALAGMAM 179 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL 262 TEK+GG+D+ A ++ + DG Y L GHKWF S P D F++LAQ G + CF V R Sbjct: 180 TEKQGGSDVRANITRAEPAGDGEYELWGHKWFCSYPPCDVFLVLAQAPGGLSCFFVER-- 237 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 P G+ +QRLK+K+G RS + E+EF L+G+ + M LD + Sbjct: 238 ---GP-GMEFQRLKDKLGTRSLPSSEVEFRGLRARLVGEEGRGVPAIIRMVNHTRLDCLL 293 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S + MR + EA H+AR R G L+DQP M+ +AD+A++ AATA + R+A SFDE Sbjct: 294 GSATAMRRGVVEAFHHARHRSAFGAKLVDQPAMRNVLADLAIESEAATAAALRVARSFDE 353 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ + R + KYW CK APA +EA+EC+GG+G++E+ + YR++P SI Sbjct: 354 -----DDVPFRRFATAVMKYWVCKRAPAHASEALECLGGNGFVEDSGMPLLYRDAPLMSI 408 Query: 443 LLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK---KVITILRDSISLCKEDKG 499 GSGN LDVL L K L + G + + + RD L + Sbjct: 409 WEGSGNVAALDVLRALVKEPEGLPALLAECHLADGGDARLDAHLARVERDVAGLLGDAGA 468 Query: 500 L-------------ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR + E + A A+ L R +AD F R Sbjct: 469 AADPAAALADAQFRARRIVEDLGTALQASLLVRNAPVAVADAFCAGRL 516 >gi|308188260|ref|YP_003932391.1| acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1] gi|308058770|gb|ADO10942.1| Putative acyl-Coenzyme A dehydrogenase [Pantoea vagans C9-1] Length = 433 Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 149/404 (36%), Positives = 225/404 (55%), Gaps = 11/404 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD+ L ++ + E L +G + S + EL R+AN P+ Sbjct: 9 FNQPHPLSNSNLFLSDTPLGEALSREGAGWDGEWLASVGRQLGSAESLELGRLANAEPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y G R D+V FHPAWH L++ LH + S++P VR+QA RAAR L Sbjct: 69 LLRYDARGVRLDEVRFHPAWHLLMQGVCASRLH----NLSWQPTVREQASVARAARFILH 124 Query: 144 AQLEAGHLMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ++AG L ++T A++ L P + W + S YD + QK + IG+G+ Sbjct: 125 AQVDAGTLCPVTMTHAAIPLLQAYLPAAFESWLDPLLSDRYDTHAQPGDQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 TEK+GG+D+ T++ G + + L+GHKWF S+P SDA ++LAQ + CF + Sbjct: 185 TEKQGGSDLLTSTTRAEPLGARGPGEAWRLTGHKWFFSAPQSDAHLVLAQTPEGLSCFFL 244 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 PRLL DGS N + ++LK+K+GNRSNA+ E+EF + G+LLG+ + M + Sbjct: 245 PRLLPDGSRNAIQLEQLKDKLGNRSNASCEVEFRDATGWLLGEEGEGVRLILKMAGMTRF 304 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 D A+ S MR + + A+ +A +R V G L+DQP+M++ +A AL + TAL RLA Sbjct: 305 DCALGSHGQMRRAFSVALWHAHQRQVMGKNLVDQPLMRQVLAQQALQLEGQTALLMRLAR 364 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ + ++ E A+AR+ P KY CK +AE+ME +G S Sbjct: 365 AWSQ-PAKPHEVAFARLFTPAAKYVICKAGAPFVAESMEVLGAS 407 >gi|167518089|ref|XP_001743385.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778484|gb|EDQ92099.1| predicted protein [Monosiga brevicollis MX1] Length = 930 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 174/543 (32%), Positives = 269/543 (49%), Gaps = 22/543 (4%) Query: 2 TLREIYRRLAMNQVH-QPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELE 59 T+ + R+ A +V +P NQ NA+ +D L A++ S + LE Sbjct: 18 TVSNLQRQAASTKVFAEPEAHRKVENQVNSLGDFNAFKADPCLQDAVLRAGASWATEHLE 77 Query: 60 LLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSI 119 +G S Q LA AN + P +H + G R D V++ ++H ++ G+ Sbjct: 78 NVGAVAGSTWMQSLAVQANTHRPIIHTHDDRGRRVDMVQYDDSYHTIMDICFSQGVPNYG 137 Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAP 176 W E K A R+A Y+M Q E+G ++T A + L + + WA Sbjct: 138 WTHEAE----KGAQSARSALSYMMYQAESGTQCPQTMTFACVPVLRKGLNEEQARYGWAE 193 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-----YCLSGH 231 K +YDP N +K +V IG+ +TE +GG+D+ A ++ + + G + L GH Sbjct: 194 KAACPDYDPRNVPVYEKEAVTIGMSMTEVQGGSDVRANSTFAEPLK-GFEHVRGHLLHGH 252 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPN-GLCYQRLKNKIGNRSNATVEL 289 KWF S+PMSD F+ LAQ + CFLVPR + G N GL ++RLKNK+G+ SNA+ E+ Sbjct: 253 KWFTSAPMSDGFLTLAQTSEGLSCFLVPRWVPSTGERNQGLQFRRLKNKLGDHSNASSEV 312 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 E+ + L+G+ + DM LD + S +R L+EA+H+ +R G L Sbjct: 313 EYHGAYAELVGEPGRGVPTIIDMVQHTRLDCLVGSAGLIRRCLSEALHHTSQRAAFGAKL 372 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 DQP+MK + D+ +D AATAL+F +A++FD + + RI PI KY+ CK AP Sbjct: 373 ADQPLMKAVLTDLIVDSEAATALAFLVASTFDNDGDKK----FGRIATPIGKYYVCKRAP 428 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 E +E +GG+GY+E+ + R YR++P N+I GSGN + LDVL + E L Sbjct: 429 HFAYECLEALGGNGYVEDSIMPRLYRQAPLNAIWEGSGNVIALDVLRSAAREPETVEVLL 488 Query: 470 STLEQDLGSSG-KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528 L G + L + ++D AR L + A+ A AL + ++ Sbjct: 489 QRLGSVQGVPAYDAALKRLHGLLHSVQKDMSQARALVGQAAMLLQAYALSLQTNTETFEL 548 Query: 529 FLE 531 F + Sbjct: 549 FCQ 551 >gi|218458995|ref|ZP_03499086.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli Kim 5] Length = 233 Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 127/233 (54%), Positives = 162/233 (69%), Gaps = 1/233 (0%) Query: 12 MNQVHQPSDSLFALNQ-PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTA 70 M ++ D L LN P+ SD L+V L A P + ++LE +G YV S A Sbjct: 1 MTSANRTDDKLAELNPAEPVVRASTPTRSDPLIVDLTAALPRGIREDLENMGRYVTSPEA 60 Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 QELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + Sbjct: 61 QELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKD 120 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 +AHK+RAAR YL AQLE+GHL ++TSAS+ AL +P V KDWAPKI SR+YD +N+ Sbjct: 121 EAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNRPA 180 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243 MQK++V IG+G+TEK+GGTD+ A S +K+S+GIY LSGHKWF+S+PMSDAF Sbjct: 181 MQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAF 233 >gi|240850657|ref|YP_002972057.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup] gi|240267780|gb|ACS51368.1| acyl-CoA dehydrogenase [Bartonella grahamii as4aup] Length = 539 Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 157/530 (29%), Positives = 282/530 (53%), Gaps = 11/530 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 N + SD+L+ + + P + E +G++ S A +L+ +AN+ P L G+ Sbjct: 13 NTFLSDTLMFRIASTLPKFLLASFEEIGDFAASREACKLSCLANHYKPLLCYNDEWGQPT 72 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 +K+E H ++ AL + S GL S+W+ S E VR QA RA RL L A LE GHL Sbjct: 73 EKLEIHSSYQALQQYSRQAGLVTSLWENTSSENGVRYQA---RAIRLALSAGLETGHLNE 129 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE-KRGGTDIA 212 +TSA++ L++ + K W + SR+YD ++K K + ++ + ++ + Sbjct: 130 VIITSAAIAVLISDIELFKKWQNVLLSRQYDSSSKPIHHKKAASLTCAFDDIEKYAFNFP 189 Query: 213 AIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270 ++ S + +Y L+ K + +P +D +++ A + G + CF +PR+ E+G+ NG Sbjct: 190 SVKKISFDDSMERDLYRLNVVKTNVINPTADGYLVSADLNGHLSCFFIPRIQENGALNGF 249 Query: 271 CYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 R L + G ++F ++G+LLG+ ++D++ ++ D +++S +R Sbjct: 250 ISIRHLIQRSGELLTPEGVVDFQGSYGWLLGNAGEGLKVIKDIETMMRFDQSVISAGVLR 309 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L I + R++ + + P+ +R ADIALDIAA+ AL RLA +FD A + E Sbjct: 310 AALQFGIDFFRKKMPNQPL---PPLTERIFADIALDIAASQALVLRLARAFDNAANDRSE 366 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA+ARIM PI Y ++ +I E + +G +IE +++ PA + S N Sbjct: 367 AAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIENNPLSQMLHNGPARIVRNSSANQ 426 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 +V D + + EK LF++L + D+G +G + I I++ + + ++G RF E++A Sbjct: 427 LVKDAILIAEKAPGLFQKLLEKIALDIGPAGPRAIEIIKSAGDMASANEGAGRFFVEQVA 486 Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 A++AAAL + +A+ ++E+R S++ ML R+NA H+++ LY Sbjct: 487 YAAAAAALRSTDIEHVANAYMESRLGGQWRSSYGMLIARYNAGHLLNVLY 536 >gi|49475586|ref|YP_033627.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1] gi|49238393|emb|CAF27620.1| Acyl-CoA dehydrogenase [Bartonella henselae str. Houston-1] Length = 598 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 164/533 (30%), Positives = 288/533 (54%), Gaps = 14/533 (2%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+ SD+L+ + + P+ + E +G++V S A ELA +AN P L G+ Sbjct: 69 NAFLSDTLMFRIASTLPTFLLASFEEIGDFVASRKAWELASLANRYRPMLRYNDEWGKPT 128 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 +K+E H ++ AL + S GL S+W+ S E +R QA RA RL L A LE GHL Sbjct: 129 EKLEIHSSYKALQQYSRQAGLVTSLWENTSSENGIRYQA---RAIRLALSASLETGHLNE 185 Query: 154 PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE----KRGGT 209 +TSA++ L++ + K W + SR+YD ++K K + ++ + ++ Sbjct: 186 VIITSAAIAVLISDVELFKKWQNALLSRQYDLSSKPVNSKKAASLTCAFDDFEKHEKHSF 245 Query: 210 DIAAIT--SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 + ++ S +K+ +Y L+ K + +P+ D +++ A+++G + CFLVPR+ E+G+ Sbjct: 246 NFPSVKKISFDEKMGRDLYRLNVVKTNVINPIVDGYLVSAELDGHLSCFLVPRMQENGAL 305 Query: 268 NG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG + + L + G S +EF + G+LLG+ ++D++ ++ D +++S Sbjct: 306 NGSISIRHLILRSGETSTPEGIVEFQGSCGWLLGNAGEGIKVIKDIETMMRFDQSVVSAG 365 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 +R +L AI + R++ + + P+ +R ADIALDIAAA AL RLA +FD A + Sbjct: 366 VLRAALQFAIDFFRQKMPNQPL---SPLTERIFADIALDIAAAQALVLRLARAFDNAAND 422 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EAA+ARIM PI Y ++ +I E + +G +IE+ +++ PA + S Sbjct: 423 RSEAAFARIMTPIIAYHVSQLVVPIIGEIIAQLGIESFIEDNPLSQMLCNGPARIVRNTS 482 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 N +V D + + EK LF++L D+G +G + I I++ + + ++G RF E Sbjct: 483 ANQLVKDAILIAEKAPGLFQKLLEKTALDIGPAGPRAIEIIKSAAEMASANEGAGRFFVE 542 Query: 507 KIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 ++A A +AA+L + +A ++E+R S++ ML R+NA +++ LY Sbjct: 543 QVAYAVAAASLRSTDIEHVASAYMESRLGGQWRSSYGMLIARYNAGLLLNVLY 595 >gi|330895555|gb|EGH27865.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 342 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 174/311 (55%), Gaps = 2/311 (0%) Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 Y L GHKWF S+PM DAF+ LAQ + + CFL+PR D + N QRLKNK+GN SNA Sbjct: 6 YELVGHKWFCSAPMCDAFLALAQTDKGLSCFLLPRHRPDDTRNEFYIQRLKNKLGNWSNA 65 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + E+EF +++G+ + +M + D I S + MR +L +A H+ R VS Sbjct: 66 SSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQALTQATHHCAYRAVS 125 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G +L +QP+M+ +AD+AL+ AA AL+ R+ + D + E + R++ + KYW C Sbjct: 126 GRLLAEQPLMQNVLADLALESEAALALTLRMGRALDH-QDDDHEKRFVRLVTAVGKYWIC 184 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 K APA+I EA EC+GG+GY+E+ + R YRE+P NS GSGN LDVL L K Sbjct: 185 KRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRTLSKEPGAL 244 Query: 466 EQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524 + LF L G I L+ + + + AR LTE IA+A L AG Sbjct: 245 DALFDELGDGHGDRHLAAHIGTLKAAFRDTGDIQYRARQLTEDIAIALQGKLLLEAGNAA 304 Query: 525 IADVFLENRFL 535 ++D F+ R + Sbjct: 305 VSDGFIAGRLV 315 >gi|218673025|ref|ZP_03522694.1| putative acyl CoA-like DNA repair protein [Rhizobium etli GR56] Length = 216 Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 105/180 (58%), Positives = 137/180 (76%) Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D+A+ +EEAAYAR+M P+ KYWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P Sbjct: 33 IDKARGNAEEAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPV 92 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 N+I GSGN M LDVL +L +G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G Sbjct: 93 NAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEG 152 Query: 500 LARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 AR L E++ALA+ AA LYR G IAD F+E R ST+ ML RF+A++I+D LY Sbjct: 153 AARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLY 212 >gi|289812368|ref|ZP_06542997.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 327 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/304 (38%), Positives = 174/304 (57%), Gaps = 1/304 (0%) Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 L GHKWF S P SDA ++LAQ +G + CF VPR L DG N + +RLK+K+GNRSNA+ Sbjct: 2 LVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASA 61 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 E+EF +T G+ LG+ + M + LD A+ S MR + + AI++A +R G Sbjct: 62 EVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGK 121 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 LI+QP+M++ ++ +AL + TAL FRLA ++ E + ++EA +AR+ P K+ CK Sbjct: 122 PLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQ 180 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 +AEAME +GG GY EE + R YRE P NSI GSGN M LDVL +L K +++ Sbjct: 181 GIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDV 240 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIAD 527 L + G + + L K D+ + R +T+++ L A + R +A Sbjct: 241 LSEAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLRHASPPLAQ 300 Query: 528 VFLE 531 + + Sbjct: 301 AWCQ 304 >gi|301632572|ref|XP_002945356.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis] Length = 377 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 10/342 (2%) Query: 202 LTEKRGGTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253 +TEK+GG+D+ + + G Y L+GHKWF S P SD F LA+V+ + Sbjct: 1 MTEKQGGSDLRETQTTARFSHAGDYHGATAHWYELTGHKWFCSVPQSDGFFTLAKVDDGI 60 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF +PR L DGS N QRLK+K GN+SNA+ E+E++ T +G + Sbjct: 61 TCFFLPRTLPDGSHNRFFVQRLKDKAGNKSNASSEVEYAGTLAIRVGAEGRGIREILSHA 120 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L LD AI S MR +L A+ + R+ G + D+P+M +AD+A+++ AAT ++ Sbjct: 121 HLTRLDFAIGSAGLMRQALTLALRHTSTRNAFGSTIADRPMMTNVLADMAVEVEAATLMA 180 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R+A + D + E AR+ P K++ C AP++ EA++C GG+G+IEE +AR Sbjct: 181 LRVAKATDLMGTSVHERLLARVATPAAKFFNCSRAPSIANEALQCHGGNGFIEENPMARV 240 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGK--KVITILRDSI 491 YRE+P NS+ G+ N M +DV + + + L L G + ++ + Sbjct: 241 YREAPLNSVWEGTANMMCMDVRRAMVRDARTIDALLDELRPLAGQDARFDALVAHTERLV 300 Query: 492 SLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENR 533 +D+ LAR +TE +A A + R + AD FL R Sbjct: 301 RAALDDEFLARPMTEAVARVLQGAEMLRHASQEAADAFLATR 342 >gi|313646339|gb|EFS10801.1| aidB domain protein [Shigella flexneri 2a str. 2457T] Length = 296 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 8/288 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPVTMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLG 282 >gi|332083186|gb|EGI88417.1| protein aidB domain protein [Shigella boydii 5216-82] Length = 300 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 8/288 (2%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGG 234 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF + G+LLG Sbjct: 235 LSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLG 282 >gi|317406879|gb|EFV86962.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 317 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/297 (37%), Positives = 167/297 (56%), Gaps = 13/297 (4%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L AY G R D V+FHPAW L+ + GLH W +PV Q R Sbjct: 4 ANRYPPRLQAYDRTGHRIDHVDFHPAWQLLMSGIVARGLHSRAW---AQPVPGAQV--AR 58 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTP----RVHKDWAPKIFSREYDPTNKAPMQ 192 AA + Q+EAG L ++T A++ L P DW P ++SRE+D + Sbjct: 59 AAAYLMQGQVEAGTLCPTTMTFAAVPLLQREPAGVIDYTGDWLPALYSREFDGADAPLAG 118 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 K IG+GLTEK+GG+D+ A+T++ I G Y L GHKWF S P +DA ++LAQ Sbjct: 119 KRGALIGMGLTEKQGGSDLRAVTTRAAPLGAIGRGCAYSLVGHKWFFSVPQADAHLVLAQ 178 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + +GCFLVPR + DG N + +RLK+K+GN SNA+ E+EF + +G ++G+ Sbjct: 179 TDEGLGCFLVPRWIPDGPRNAVRIRRLKDKLGNHSNASAEVEFEDAWGVMVGEPGRGLAV 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +M LD + S + +R +L +++H+A R G L+ QP+M+ + D+AL+ Sbjct: 239 LLEMAATTRLDCVLGSAALLRQALVQSLHHACHRQAFGKPLLAQPLMRNVLGDLALE 295 >gi|229494748|ref|ZP_04388506.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229318415|gb|EEN84278.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 571 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 149/451 (33%), Positives = 224/451 (49%), Gaps = 43/451 (9%) Query: 34 MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88 MN +D L A++ + + +E L+ LG + ELA +A+ N P L + Sbjct: 1 MNFAHTDPALTAVVDRWTAGADRETLNGLLDRLGRDA-AGRLSELADIADKNPPVLQQFD 59 Query: 89 PGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDRSFEPVVRKQAHKIRAA 138 G+R D++ +HPA+ L R + ++ GLH WD P+ + A Sbjct: 60 KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHG--WDSVHPPLAKYLAS----- 112 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVA 197 Y+ Q E G S+T A+ L R+ D P +FS D T+ P Q + A Sbjct: 113 --YIFVQAEFGLACPVSMTDAAARTL----RMFGD--PAVFSPWIDALTSTDPEQAKTGA 164 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 + +TE + GTDIA ++ ++ DG + L+G KWF S+P +D I LA+ G Sbjct: 165 --MFMTEIQAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGST 221 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 VG F+VP+ L G N L RLK+K+G RS + E+ + +G+L+ + Sbjct: 222 RGVGMFMVPKTLGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMA 281 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +M L +A+ S + MR ++ EA+ +++ R V G L DQP+M+ + +ALD A+ Sbjct: 282 EMVNTSRLSNAMRSSALMRRAVREAVEHSKSRVVFGKRLFDQPLMRATLLPLALDAEASL 341 Query: 371 ALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL A A E+A A R++ PI K++ CK A V EAME GG+GYIEE Sbjct: 342 ALVAYSAQCLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWV 401 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 AR R++ SI GS N + LDVL L K Sbjct: 402 NARLVRDAHLGSIWEGSSNVIALDVLRCLRK 432 >gi|226309399|ref|YP_002769359.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226188516|dbj|BAH36620.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 571 Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 148/451 (32%), Positives = 225/451 (49%), Gaps = 43/451 (9%) Query: 34 MNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQLHAYG 88 MN +D L A++ + + +E L+ LG + ELA +A+ N P L + Sbjct: 1 MNFAYTDPALTAVVDRWTAGADRETLNGLLDRLGRDA-AGRLSELADIADKNPPVLQQFD 59 Query: 89 PGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDRSFEPVVRKQAHKIRAA 138 G+R D++ +HPA+ L R + ++ GLH WD P+ + A Sbjct: 60 KAGDRVDRISYHPAYLELCRAAYNEYGLSAMSHRKGLHG--WDSVHPPLAKYLAS----- 112 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVA 197 Y+ Q E G S+T A+ L R+ D P +FS D T+ P Q + A Sbjct: 113 --YIFVQAEFGLACPVSMTDAAARTL----RMFGD--PAVFSPWIDALTSTDPEQAKTGA 164 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 + +TE + GTDIA ++ ++ DG + L+G KWF S+P +D I LA+ G Sbjct: 165 --MFMTEIQAGTDIACTETRAERDGDG-WVLTGKKWFASNPDADVIITLARFPGGQDGST 221 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 VG F+VP+ + G N L RLK+K+G RS + E+ + +G+L+ + Sbjct: 222 RGVGMFMVPKTVGSGERNNLTIDRLKDKLGTRSMPSGEVTLNRAHALQVGELDRGFRQMA 281 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +M L +A+ S + MR ++ EA+ +++ R V G L DQP+M+ + +ALD A+ Sbjct: 282 EMVNTSRLSNAMRSSALMRRAVREAVEHSKSRVVFGKKLFDQPLMRATLLPLALDAEASL 341 Query: 371 ALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL A A E+A A R++ PI K++ CK A V EAME GG+GYIEE + Sbjct: 342 ALVAYSAQCLQAADGGDEQARALIRVLTPIAKHFVCKRARVVTGEAMEVRGGNGYIEEWA 401 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 AR R++ SI GS N + LDVL L K Sbjct: 402 NARLVRDAHLGSIWEGSSNVIALDVLRCLRK 432 >gi|213420188|ref|ZP_03353254.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 285 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/280 (38%), Positives = 162/280 (57%), Gaps = 1/280 (0%) Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 SDA ++LAQ +G + CF VPR L DG N + +RLK+K+GNRSNA+ E+EF +T G+ L Sbjct: 2 SDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDTVGWRL 61 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G+ + M + LD A+ S MR + + AI++A +R G LI+QP+M++ + Sbjct: 62 GEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQPLMRQTL 121 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + +AL + TAL FRLA ++ E + ++EA +AR+ P K+ CK +AEAME + Sbjct: 122 SRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVL 180 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GG GY EE + R YRE P NSI GSGN M LDVL +L K +++ L + G Sbjct: 181 GGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLSEAFAEVKGQD 240 Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 + + L K D+ + R +T+++ L A + R Sbjct: 241 RHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLR 280 >gi|218661251|ref|ZP_03517181.1| putative acyl CoA-like DNA repair protein [Rhizobium etli IE4771] Length = 168 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 93/159 (58%), Positives = 121/159 (76%) Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +YWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P N+I GSGN M LDVL +L + Sbjct: 6 QYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNR 65 Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520 G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G AR L E++ALA+ AA LYR Sbjct: 66 GKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEGAARLLVEQLALAAGAAELYRL 125 Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 G IAD F+E R ST+ ML RF+A++I+D LY Sbjct: 126 GAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLY 164 >gi|121599566|ref|YP_994233.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124385246|ref|YP_001028114.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10229] gi|121228376|gb|ABM50894.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] Length = 298 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/274 (39%), Positives = 155/274 (56%), Gaps = 5/274 (1%) Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 QRLK+K+GNRSNA+ E+EF N +G ++GD + +M LD I S + MR +L Sbjct: 2 QRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRAAL 61 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEA- 390 +AIH+AR R G +L DQP+M+ +AD+AL+ AAT L RLA++F+E A +RS +A Sbjct: 62 VQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRLAHAFEEDAAARSPQAR 121 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + RI+ K+W CK EAME GG+GY+E +AR YRE+P NSI GSGN M Sbjct: 122 GWRRIVTSAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVM 181 Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSG--KKVITILRDSISLCKEDK-GLARFLTEK 507 +DVL +E+ + LF S + L +SL E + AR + ++ Sbjct: 182 CIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLSLEPEPREACARRIAQR 241 Query: 508 IALASSAAALYRAGMNDIADVFLENRFLDNCHST 541 IAL + A+ L R G +A F+ RF + T Sbjct: 242 IALVAQASLLLRDGPYAVAQAFVATRFGHDSSET 275 >gi|324997693|ref|ZP_08118805.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1] Length = 982 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 130/409 (31%), Positives = 202/409 (49%), Gaps = 33/409 (8%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR--- 129 LAR A+ + P+ + P GER D++EFHPA+ L + H + S P V Sbjct: 58 LARTADRHPPRHVPFAPSGERIDEIEFHPAYDGLAEVAFH---RFGLAAMSHRPGVNGWP 114 Query: 130 -KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 + H ++ A YL Q E G S+T ++ R+ + + F+ E D + Sbjct: 115 GRTPHVVKYALSYLFVQSEFGIACPLSMTDSAA-------RILRLFDAGRFAAEIDALSS 167 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 T+ + +TE GGTD+ ++ D + L+G KWF S+ +D + LA+ Sbjct: 168 TD-PATAATGAMFMTEIDGGTDVGRTATEATDHGDH-WTLTGRKWFCSNVTADVVLTLAR 225 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V G+ +G FLVPR DGS N + RLK+K+G RS A+ E+ + +G+L Sbjct: 226 VPGQGEGTRGLGMFLVPRTRPDGSRNAVRVDRLKDKLGTRSMASGEVTLEGAWAQPVGEL 285 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + + +M + L +A+ S + MR ++ EA+ + R R VSG L D+P+M+ + + Sbjct: 286 SRGFLQMAEMVNVSRLSNAMRSAALMRRAVREAVDHTRERVVSGTALFDKPLMRATLLPL 345 Query: 363 ALDIAAATALSFRLANSFDEAKS---------RSEEAAYA--RIMAPITKYWCCKMAPAV 411 LD A+ AL A+ D A + ++ AA + RI+ P+ KY CK A V Sbjct: 346 LLDAEASLALVLECADRLDAADAVTFGEVTGDAADPAARSLIRILTPLAKYTVCKRARFV 405 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E ME GG+GYIE+ R R++ SI GS N + LD+L L K Sbjct: 406 TGETMEIRGGNGYIEDFVDPRLLRDAHLGSIWEGSSNVIALDILRCLRK 454 >gi|218660229|ref|ZP_03516159.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli IE4771] Length = 145 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/145 (60%), Positives = 107/145 (73%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 +G YV S AQELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+W Sbjct: 1 MGRYVTSPEAQELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVW 60 Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 D + + +AHK+RAAR YL AQLE GHL ++TSAS+ AL +P V KDWAPKI S Sbjct: 61 DPQADTDAKDEAHKVRAARFYLTAQLETGHLCPLTMTSASVAALSASPAVQKDWAPKILS 120 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEK 205 R+YD +N+ MQK++V IG+G+TEK Sbjct: 121 RKYDSSNRPAMQKSAVTIGMGMTEK 145 >gi|163855144|ref|YP_001629442.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163258872|emb|CAP41171.1| probable acyl-CoA dehydrogenase [Bordetella petrii] Length = 562 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 130/445 (29%), Positives = 218/445 (48%), Gaps = 23/445 (5%) Query: 33 GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N +S+D +L A + P +H LE LG LA +A+ N P L Sbjct: 16 GLNLFSADPYAASLCALYLPPDLHAHLLPHLERLGALA-GGHIDALAAVADQNPPTLSVR 74 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVVRKQAHKIRAARLYLMA 144 G+ +V HPA+ L R + + ++ R P A K + L++ A Sbjct: 75 NRAGQDESRVHKHPAYVELERLAYSEFGLAALSHRGGVLDWPAPMPPAAKYALSHLFVQA 134 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 + +S + + A + P + + P++ S+++D + M +TE Sbjct: 135 EFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDELRQGAMF---------MTE 185 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FLVP 259 + G+D++A T++ + +DG + L G KWF S+P + ++LA+ E G FL+P Sbjct: 186 QGAGSDVSATTTRAEPQADGTWRLHGDKWFCSNPDAGFAMVLARSEDMPGLKGVSLFLLP 245 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R L DG+ N RLK+K+G RS A+ E+ +L+G+ + DM L Sbjct: 246 RDLPDGTHNAYRILRLKDKLGTRSMASGEIRLEGALAWLVGERGKGFKHMADMINNSRLS 305 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + + MR ++ EAI++A+ R G LID P+M+R +A + + A ++ F+ A + Sbjct: 306 NGMRAAGLMRRAVTEAIYFAQHRRAFGKRLIDMPLMRRQLAKMNVWAEQARSVMFQTAAA 365 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +A+ ++ AA ARI+ P+ K+ C+ A V + ME GG GYIEE AR R++ Sbjct: 366 LADAEQNADAAALARILTPLIKFRACRDARKVTGDGMEVRGGCGYIEEFVEARLVRDAHL 425 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464 SI G+ N + LDVL ++K L Sbjct: 426 GSIWEGTSNIVALDVLRAIQKTDAL 450 >gi|108800992|ref|YP_641189.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870133|ref|YP_940085.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126436829|ref|YP_001072520.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108771411|gb|ABG10133.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696222|gb|ABL93295.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126236629|gb|ABO00030.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 582 Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 145/482 (30%), Positives = 227/482 (47%), Gaps = 50/482 (10%) Query: 32 IGMNAYSSDSLLVALIANF--PS---VVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 +G+N Y++D L +A + P V L +GE + A+ A + N P+L Sbjct: 24 VGLNWYTTDPTLQFTLAYYVPPDQLPVAETHLTRIGELMGGAVAR-WAEETDRNPPRLER 82 Query: 87 YGPGGERWDKVEFHPAWHALLR------RSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 Y G +V P++ A R +++ D + + RS P+ A Sbjct: 83 YDKWGHDVSRVVMPPSFTAAKRAVLDAQQALRDDMRAA-GGRSSIPMF---------AAN 132 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL+ Q + G L T MVA + D + + K + + Sbjct: 133 YLLNQADIG-LGCALGTGGGMVAALVAAYAPADVRDHVLA-------KFESGEWAGETAQ 184 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254 LTE+ GG+D+ A+ + + D + L G KWF S+ +AF++LA+ EG V Sbjct: 185 MLTERTGGSDLGALETTATRRGDA-WRLDGFKWFASNCDGEAFVVLAKPEGAPDSGRGVA 243 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE--- 310 FLV R DGS NG+ +RLKNK+G RS A+ E+EF + FLL G+ + GP + Sbjct: 244 SFLVLRTRRDGSRNGVRIRRLKNKLGTRSVASGEVEFVDAEAFLLSGEPSTEAGPSDGKG 303 Query: 311 -----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ L A+ +V R +L E++ YAR RH G LID+P+M+R +A++ +D Sbjct: 304 LGRMMELTNAARLGIALFAVGNARRALVESLTYARNRHAFGSALIDKPLMRRKLAEMIVD 363 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA AL F + A R RI P+TK C++ ++A+E GG+GYI Sbjct: 364 VEAAQALVF---DCTGLANHRQPRRVRQRIAVPVTKLKVCRLGITAASDAVEIHGGNGYI 420 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485 E+ +AR R++ N+I G N + LDV + + + EQL S L + S + T Sbjct: 421 EDWPVARLLRDAQVNTIWEGPDNILCLDVARGIRR-AHAHEQLLSRLHDAVSVSDDEATT 479 Query: 486 IL 487 L Sbjct: 480 AL 481 >gi|313675612|ref|YP_004053608.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] gi|312942310|gb|ADR21500.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] Length = 574 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 141/482 (29%), Positives = 223/482 (46%), Gaps = 32/482 (6%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 A+ N PQL GE D+V+FHP++ L++ +I + W+ + + + + H + Sbjct: 70 ADKNGPQLVKRNFFGEDIDEVKFHPSYQELMQIAIDSEMFKVKWEPNLKEAFKHERHSLG 129 Query: 137 AARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 A YL A E G +T A ++ L T K P I++ E + Sbjct: 130 FAPGYLYAMSELGQYCPLCMTDGVARLIDLHCTEEDKKRLLPHIYTTEL---------RD 180 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----E 250 + LTEK GG+D+ + +K DG Y LSG KWF S+ ++ LA+ E Sbjct: 181 FFTGAMFLTEKSGGSDVGRNLVKAEKQKDGSYLLSGEKWFCSNVNAELIFALARTDESKE 240 Query: 251 GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G G FL+ + L DGS N L RLK+K+G RS A+ E T G L+GD Sbjct: 241 GTRGLSIFLIEKTLPDGSKNKLPIVRLKDKLGVRSMASAECILDGTVGMLVGDEFNGFKI 300 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + DM L L ++I ++SG R +L EA ++ R G I+ P++K + ++ A Sbjct: 301 MTDMINLSRLYNSIAALSGARRALVEAYNFNLFRKSFGKTAIEHPLIKEKLFELGSLNVA 360 Query: 369 ATALSFRLANSFDEAKSRSEEAA--------YARIMAPITKYWCCKMAPAVIAEAMECIG 420 L++R + D+A + +E A+ R++ P+ K W + A + E+ME +G Sbjct: 361 NFYLTWRAIEALDKADNGNESASRQTENEKHLGRLLTPMVKKWSAEKAVYITRESMELMG 420 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 G GYIE+ I + R+ I G+GN M LD+L K L + + +++ LG Sbjct: 421 GIGYIEDGVIPKIMRDVMVLPIWEGAGNIMTLDMLRASFKSDGL-KVMMEEIKKSLGKIS 479 Query: 481 KKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHS 540 + TIL L E K + F E+ L A + + +F + LDN Sbjct: 480 QYDDTILEHLKEL--ESKLKSLFKMEQDELELHAKYFFEK----LTTLFQLSLILDNWED 533 Query: 541 TH 542 T+ Sbjct: 534 TN 535 >gi|218683103|ref|ZP_03530704.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli CIAT 894] Length = 181 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 75/127 (59%), Positives = 98/127 (77%) Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 +M P+ KYWCCK+APA+I EAMECIGG+GYIEER IARHYRE+P N+I GSGN M LDV Sbjct: 1 VMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDV 60 Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 L +L +G +LFE +F+ L +DLG +GKK I +LR +I+LC++D+G AR L E++ALA+ Sbjct: 61 LRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIALCEQDEGAARLLVEQLALAAGC 120 Query: 515 AALYRAG 521 AG Sbjct: 121 CRTLSAG 127 >gi|27383010|ref|NP_774539.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27356183|dbj|BAC53164.1| bll7899 [Bradyrhizobium japonicum USDA 110] Length = 594 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 138/448 (30%), Positives = 221/448 (49%), Gaps = 38/448 (8%) Query: 29 PLFIGMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQ 83 P GMN Y +D L L+ + P + + +E LGE + T E AR+A+ +TP Sbjct: 22 PDTSGMNFYRADQALTDLLRIHLPETLFRHIEPHLDRLGE-LAGGTLDECARLADRHTPV 80 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SI------WDRSFEPVVRKQAHKI 135 LH G +E+HPA+ L + + + G+H SI W + PVV K A Sbjct: 81 LHQRDKFGRDVQWIEYHPAYRELEKAAFGEFGIHALSIRKGIMGWPDKY-PVVAKHAFT- 138 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY-DPTNKAPMQKT 194 +L Q E G +VT L ++ + +Y D + M K Sbjct: 139 -----FLFNQTEFGMGCPINVTDGCAKLL-------ANFGSEALKAKYLDGLTQTDMTKL 186 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252 + G +TEK GG+D+ +T++ + D + L G KWF S+ + ++LA+ EG Sbjct: 187 TQG-GQFMTEKEGGSDVGTLTTRAVQEGDH-WRLYGEKWFCSNADAKVVMLLARPEGAGP 244 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 VG FL+ R L+DGS N RLK+K+G RS A+ E++ + +G L+ Sbjct: 245 GTRGVGLFLMLRFLDDGSQNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 304 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M L + + S + MR + +A+ A+ R V G +ID P+ +R + I L + Sbjct: 305 MAEMVNSSRLSNGVKSTALMRRAYHDAMTVAKNRVVFGSRIIDLPLGRRQMLKIMLPVEQ 364 Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A ++SF A++ D A++ S++ AA RI+ P K+ + A V +A+E GG GYIEE Sbjct: 365 ALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYIEE 424 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455 + AR R++ S+ G+GN + +D L Sbjct: 425 FATARLLRDAHLGSVWEGTGNIVAIDAL 452 >gi|148258335|ref|YP_001242920.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146410508|gb|ABQ39014.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 594 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 143/473 (30%), Positives = 225/473 (47%), Gaps = 48/473 (10%) Query: 12 MNQVHQPSDSLFALNQPPLF----IGMNAYSSDSLLVALIA-NFPSVVHKEL-------- 58 M+Q + D + +P L G+N Y +D L L+ + P + + L Sbjct: 1 MHQFLKREDVMTGGARPALLAPDTTGLNFYRADPALSDLLRIHLPDTLFRHLTPHLDRLG 60 Query: 59 ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC 117 EL G Y+ C AR+A+ + P LH G +E+HPA+ L R + + G+H Sbjct: 61 ELAGGYLDEC-----ARLADRHGPVLHQRDRFGRDMQWIEYHPAYRELERAAFGEFGIHA 115 Query: 118 -SI------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170 SI W + PVV K A +L Q E G +VT L + Sbjct: 116 MSIRKGILGWPDKY-PVVAKHAFT------FLFNQAEFGLGCPINVTDGCAKLLASFG-- 166 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + +R D + M+K + G +TEK GG+D+ +T+ D + L G Sbjct: 167 ----SDGLKARYLDGLTQTDMRKLTQG-GQFMTEKEGGSDVGTLTTVAVPEGDH-WRLHG 220 Query: 231 HKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 KWF S+ + ++LA+ +G VG FL+PR L+DGS N RLK+K+G RS Sbjct: 221 EKWFCSNADAKVVMLLARPQGADSGTRGVGLFLMPRFLDDGSQNRYRIVRLKDKLGTRSM 280 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 A+ E++ + +G L+ + +M L + + S + MR + +AI AR R V Sbjct: 281 ASGEIKLEGAIAYAVGRLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVARNRVV 340 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYW 403 G ++D P+ +R + I L A ++SF A++ D A++ S++ AA RI+ P K+ Sbjct: 341 FGQRIVDLPLGRRQLMKILLATEQALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFR 400 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A V +A+E GG GY+EE AR R++ SI G+GN + LD L Sbjct: 401 ATRDARKVCGDALEMRGGIGYVEEFVTARLLRDAHLGSIWEGTGNIVALDALK 453 >gi|295098335|emb|CBK87425.1| Acyl-CoA dehydrogenases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 254 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 143/258 (55%), Gaps = 12/258 (4%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELL---GEYVLSCTAQ 71 +H + ++F NQP N + SD L +A +++LL G+ + + + Sbjct: 1 MHWQTHTVF--NQPAPLSNSNLFLSDCALRDAVAR--EGAEWDVDLLASIGQQLGTAESL 56 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ RK Sbjct: 57 ELGRLANVNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWEEE----ARKG 112 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 + RAAR L AQ+EAG L ++T +A+ + L + P+ DW + S YDP Sbjct: 113 SFVARAARFVLHAQVEAGTLCPVTMTFAATPLLLQSLPKPFHDWLTPLMSDRYDPHLAPG 172 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 QK + IG+G+TEK+GG+D+ + T++ +K SDG Y L GHKWF S P SDA ++LAQ + Sbjct: 173 AQKRGLLIGMGMTEKQGGSDVLSNTTKAEKCSDGSYRLVGHKWFFSVPQSDAHLVLAQAK 232 Query: 251 GRVGCFLVPRLLEDGSPN 268 G + CF VPR L DG N Sbjct: 233 GGLSCFFVPRFLPDGQRN 250 >gi|323166669|gb|EFZ52427.1| aidB domain protein [Shigella sonnei 53G] Length = 312 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 1/258 (0%) Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 + DG N + +RLK+K+GNRSNA+ E+EF + G+LLG + M + D A Sbjct: 1 MPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRFDCA 60 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL FRLA ++D Sbjct: 61 LGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWD 120 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE P NS Sbjct: 121 R-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNS 179 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501 I GSGN M LDVL +L K +++ L + G + R L K + L Sbjct: 180 IWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELG 239 Query: 502 RFLTEKIALASSAAALYR 519 R +T ++ L A + + Sbjct: 240 REITHQLFLLGCGAQMLK 257 >gi|146338027|ref|YP_001203075.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146190833|emb|CAL74838.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 594 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 142/473 (30%), Positives = 224/473 (47%), Gaps = 48/473 (10%) Query: 12 MNQVHQPSDSLFALNQPPLF----IGMNAYSSDSLLVALIA-NFPSVVHKEL-------- 58 M+Q + D + +P L G+N Y +D L L+ + P + + L Sbjct: 1 MHQFLKRDDVMTGGKRPELLAPDTTGLNFYRADPALSDLLRIHLPDALFRHLVPHLDRLG 60 Query: 59 ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC 117 EL G Y+ C AR+A+ + P LH G +E+HPA+ L R + + G+H Sbjct: 61 ELAGGYLDEC-----ARLADRHGPVLHQRDRFGRDAQWIEYHPAYRELERAAFGEFGIHA 115 Query: 118 -SI------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170 SI W + PV K A +L Q E G L P + L+ + Sbjct: 116 MSIRKGILGWPAKY-PVAAKHAFT------FLFNQAEFG-LGCPINVTDGCAKLLASFGS 167 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 H + ++ D + M+K + G +TEK GG+D+ +T+ D + L G Sbjct: 168 HA-----LKAKYLDGLTQTDMRKLTQG-GQFMTEKEGGSDVGTLTTVAVPEGDH-WRLHG 220 Query: 231 HKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 KWF S+ + ++LA+ EG VG FL+PR L+DG+ N RLK+K+G RS Sbjct: 221 EKWFCSNADAKVVMLLARPEGAEPGTRGVGLFLMPRFLDDGTQNHYRIVRLKDKLGTRSM 280 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 A+ E+ + +G L+ + +M L + + S + MR + +AI AR R V Sbjct: 281 ASGEIRLEGAIAYAVGRLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVARNRVV 340 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYW 403 G ++D P+ +R + I L A ++SF A++ D A++ S++ AA RI+ P K+ Sbjct: 341 FGQRIVDLPLGRRQLMKILLPTEQALSMSFLTADALDRAEAGSQDAAALLRILTPTLKFR 400 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A V +A+E GG GY+EE AR R++ SI G+GN + LD L Sbjct: 401 ATRDARKVCGDALEMRGGIGYVEEFVTARLLRDAHLGSIWEGTGNIVALDALK 453 >gi|308376237|ref|ZP_07438107.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008] gi|308379622|ref|ZP_07486936.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010] gi|308351808|gb|EFP40659.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu008] gi|308356543|gb|EFP45394.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu010] Length = 551 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D ++ L+G KWF S+ +AF++LA+ EG V Sbjct: 152 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 210 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ + GP + Sbjct: 211 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 270 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L +A ++ R +L E++ YA +R GG LID+P+M+R +A++ +D+ Sbjct: 271 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 330 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + F A R RI P+TK C++ V ++A+E GG+GYIE Sbjct: 331 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 387 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 +AR R++ N+I G N + LDV +E+ T E L + L Sbjct: 388 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 432 >gi|148825004|ref|YP_001289758.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11] gi|254233290|ref|ZP_04926616.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C] gi|308232573|ref|ZP_07416496.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001] gi|308371458|ref|ZP_07425035.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003] gi|308372661|ref|ZP_07429402.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004] gi|308373826|ref|ZP_07433766.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006] gi|308374989|ref|ZP_07442313.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007] gi|308378475|ref|ZP_07482702.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009] gi|308380814|ref|ZP_07491153.2| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011] gi|124603083|gb|EAY61358.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis C] gi|148723531|gb|ABR08156.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis F11] gi|308213680|gb|EFO73079.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu001] gi|308328817|gb|EFP17668.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu003] gi|308332660|gb|EFP21511.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu004] gi|308344138|gb|EFP32989.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu006] gi|308347940|gb|EFP36791.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu007] gi|308352591|gb|EFP41442.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu009] gi|308360491|gb|EFP49342.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu011] Length = 585 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D ++ L+G KWF S+ +AF++LA+ EG V Sbjct: 186 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 244 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ + GP + Sbjct: 245 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 304 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L +A ++ R +L E++ YA +R GG LID+P+M+R +A++ +D+ Sbjct: 305 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 364 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + F A R RI P+TK C++ V ++A+E GG+GYIE Sbjct: 365 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 421 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 +AR R++ N+I G N + LDV +E+ T E L + L Sbjct: 422 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 466 >gi|215405851|ref|ZP_03418032.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis 02_1987] gi|215448144|ref|ZP_03434896.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T85] gi|289747639|ref|ZP_06507017.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987] gi|289759964|ref|ZP_06519342.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85] gi|294995289|ref|ZP_06800980.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis 210] gi|289688167|gb|EFD55655.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis 02_1987] gi|289715528|gb|EFD79540.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis T85] gi|326905635|gb|EGE52568.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis W-148] Length = 593 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D ++ L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ + GP + Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 312 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L +A ++ R +L E++ YA +R GG LID+P+M+R +A++ +D+ Sbjct: 313 TRMMELTNRLRLGTAPFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 372 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + F A R RI P+TK C++ V ++A+E GG+GYIE Sbjct: 373 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 +AR R++ N+I G N + LDV +E+ T E L + L Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 474 >gi|15610933|ref|NP_218314.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium tuberculosis H37Rv] gi|15843419|ref|NP_338456.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31794970|ref|NP_857463.1| acyl-CoA dehydrogenase FADE35 [Mycobacterium bovis AF2122/97] gi|121639714|ref|YP_979938.1| putative acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663665|ref|YP_001285188.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra] gi|167967229|ref|ZP_02549506.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra] gi|215413724|ref|ZP_03422392.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis 94_M4241A] gi|215432778|ref|ZP_03430697.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054] gi|218755585|ref|ZP_03534381.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis GM 1503] gi|219559886|ref|ZP_03538962.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T17] gi|224992209|ref|YP_002646899.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800845|ref|YP_003033847.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435] gi|254366343|ref|ZP_04982387.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str. Haarlem] gi|254552912|ref|ZP_05143359.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184722|ref|ZP_05762196.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A] gi|260198845|ref|ZP_05766336.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46] gi|289441234|ref|ZP_06430978.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46] gi|289445398|ref|ZP_06435142.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A] gi|289556064|ref|ZP_06445274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605] gi|289572047|ref|ZP_06452274.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17] gi|289755930|ref|ZP_06515308.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054] gi|289763982|ref|ZP_06523360.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503] gi|297636479|ref|ZP_06954259.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207] gi|297733473|ref|ZP_06962591.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN R506] gi|298527272|ref|ZP_07014681.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|307086596|ref|ZP_07495709.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012] gi|313660804|ref|ZP_07817684.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN V2475] gi|2950416|emb|CAA17861.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE35 [Mycobacterium tuberculosis H37Rv] gi|13883787|gb|AAK48270.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31620568|emb|CAD96012.1| PROBABLE ACYL-COA DEHYDROGENASE FADE35 [Mycobacterium bovis AF2122/97] gi|121495362|emb|CAL73849.1| Probable acyl-CoA dehydrogenase fadE35 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151855|gb|EBA43900.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis str. Haarlem] gi|148507817|gb|ABQ75626.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis H37Ra] gi|224775325|dbj|BAH28131.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322349|gb|ACT26952.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 1435] gi|289414153|gb|EFD11393.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T46] gi|289418356|gb|EFD15557.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis CPHL_A] gi|289440696|gb|EFD23189.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 605] gi|289545801|gb|EFD49449.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T17] gi|289696517|gb|EFD63946.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis EAS054] gi|289711488|gb|EFD75504.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis GM 1503] gi|298497066|gb|EFI32360.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308364008|gb|EFP52859.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis SUMu012] gi|328460573|gb|AEB05996.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis KZN 4207] Length = 593 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 20/286 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D ++ L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ + GP + Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPSDGKGL 312 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L +A ++ R +L E++ YA +R GG LID+P+M+R +A++ +D+ Sbjct: 313 TRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGALIDKPLMRRKLAEMVVDV 372 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + F A R RI P+TK C++ V ++A+E GG+GYIE Sbjct: 373 EAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLGITVASDAIEIHGGNGYIE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 +AR R++ N+I G N + LDV +E+ T E L + L Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLARL 474 >gi|33603021|ref|NP_890581.1| putative oxidoreductase [Bordetella bronchiseptica RB50] gi|33568652|emb|CAE34410.1| putative oxidoreductase [Bordetella bronchiseptica RB50] Length = 569 Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/401 (29%), Positives = 194/401 (48%), Gaps = 17/401 (4%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVV 128 ELA A+ + P L G +++ HPA+ L R + + ++ R P Sbjct: 65 ELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPDP 124 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 A K + L++ A+ +S + + A + P + + P++ ++++D + Sbjct: 125 MPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDFDQLQQ 184 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 M +TE+ G+D++A T Q +DG + L G KWF S+P + ++LA+ Sbjct: 185 GAM---------FMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFAMVLAR 235 Query: 249 VEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 E G FL+PR L DGSPN RLK+K+G RS A+ E+ +L+G Sbjct: 236 SEPNAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWLVGQRG 295 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + DM L + + + MR +L EA+ +A++R G LID P+M+R +A +A Sbjct: 296 QGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQLAKMA 355 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A ++ F+ A + A EAA RI+ P+ K+ C+ A V +AME GG G Sbjct: 356 MRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEVRGGCG 415 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 YIEE R R++ SI G+ N + LDVL + K L Sbjct: 416 YIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADAL 456 >gi|33598128|ref|NP_885771.1| putative oxidoreductase [Bordetella parapertussis 12822] gi|33566686|emb|CAE38896.1| putative oxidoreductase [Bordetella parapertussis] Length = 569 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/401 (29%), Positives = 194/401 (48%), Gaps = 17/401 (4%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVV 128 ELA A+ + P L G +++ HPA+ L R + + ++ R P Sbjct: 65 ELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPDP 124 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 A K + L++ A+ +S + + A + P + + P++ ++++D + Sbjct: 125 MPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVEQVLPQVITQDFDQLQQ 184 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 M +TE+ G+D++A T Q +DG + L G KWF S+P + ++LA+ Sbjct: 185 GAM---------FMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFCSNPDAGFAMVLAR 235 Query: 249 VEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 E G FL+PR L DGSPN RLK+K+G RS A+ E+ +L+G Sbjct: 236 SEPDAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEIRLEGALAWLVGQRG 295 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + DM L + + + MR +L EA+ +A++R G LID P+M+R +A +A Sbjct: 296 QGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKRLIDMPLMRRQLAKMA 355 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A ++ F+ A + A EAA RI+ P+ K+ C+ A V +AME GG G Sbjct: 356 MRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRDARQVTGDAMEVRGGCG 415 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 YIEE R R++ SI G+ N + LDVL + K L Sbjct: 416 YIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADAL 456 >gi|301631397|ref|XP_002944784.1| PREDICTED: protein AidB-like [Xenopus (Silurana) tropicalis] Length = 565 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 136/451 (30%), Positives = 214/451 (47%), Gaps = 41/451 (9%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQLHAY 87 G N Y+ D+ L L+A + P + + + E LG ++ ELA A+ N P L + Sbjct: 18 GQNLYTVDAELQRLLALYLPDGLRRHMAPHFERLG-HLAGGRLDELAAAADRNPPVLESR 76 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139 G ++ HPA+ + ++ + SI W P V+ Sbjct: 77 TRTGLDVQRIVKHPAYVEMEHLALSEFAMGSISHRDETFGWQGRMPPAVKY-------VL 129 Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 YL Q E G S+T + L +P + + ++ S ++D + M Sbjct: 130 FYLFVQAEFGLCCPVSMTDSLTRTLKKFGSPELVGRFLARLTSLDFDELAQGAMF----- 184 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 +TE+ G+DIAA T+ + ++G + LSG KWF S+P +D ++LA+V+G Sbjct: 185 ----MTEQAAGSDIAATTTLARAGANGTWLLSGDKWFCSNPDADFAMVLARVDGGPPGMK 240 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 V FL+PR LEDGS N RLK+K+G RS A+ E+ +L+G+ V D Sbjct: 241 GVSLFLLPRRLEDGSLNHYHIVRLKDKMGTRSMASGEIRLQGAVAYLVGEQGRGFVQVAD 300 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L + + + MR ++AEA H A R G L D P+M+R I + + A Sbjct: 301 MVNNSRLSNGVRAAGLMRRAVAEAEHVASERRAFGKRLQDMPLMQRQIDKLRVPAEQART 360 Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + F+ A + + + E+ AYA RI+ P+ K+ C+ A V +AME GG GYIEE S Sbjct: 361 MMFQTALALQRSDA-GEDGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 419 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV+ + + Sbjct: 420 DPRLVRDAHLGSIWEGTSNIVALDVVRAIRR 450 >gi|237798437|ref|ZP_04586898.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021288|gb|EGI01345.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 304 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 146/288 (50%), Gaps = 11/288 (3%) Query: 19 SDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSV-VHKELELLGEYVLSCTAQELARMA 77 +++ NQPP G+N Y D L + + ++ G + +A Sbjct: 7 AETHLVTNQPPSLDGVNLYRIDLPLQKWSQRYGACWAQARIDAYGA-LAGGPLMAAGFLA 65 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N N P ++ G R D VEFHPA+H L+ +I G+ W EP + AH RA Sbjct: 66 NRNKPVFASHDRYGHRIDLVEFHPAYHQLMSTAIEHGITSLPWT---EP--QPGAHVARA 120 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A YL Q + G ++T AS+ AL P + W PK+ S +YDP N K Sbjct: 121 AMSYLHTQADPGRGCPLTMTFASVPALRQQPGLADIWLPKVLSTQYDPRNVGIAHKAGAT 180 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGRV 253 IG+ +TEK+GGTD+ A T++ G Y L GHKWF S+PM DAF+ LAQ + Sbjct: 181 IGMAMTEKQGGTDVRANTTRAFPAGVGGPGKAYELVGHKWFCSAPMCDAFLTLAQTGKGL 240 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 CFL+PR D + N QRLK+K+GN SNA+ E+EF +++G+ Sbjct: 241 SCFLLPRHRPDDTRNEFYIQRLKDKLGNWSNASSEVEFRGALAWMIGE 288 >gi|111019931|ref|YP_702903.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819461|gb|ABG94745.1| probable AidB protein [Rhodococcus jostii RHA1] Length = 571 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 203/407 (49%), Gaps = 37/407 (9%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD----------GLHCSIWDR 122 LA A+ N P L + GER D++ +HP++ L R + + GLH WD Sbjct: 44 LAATADKNPPVLQQFDRDGERIDRIAYHPSYQELCRAAYSEYGLSALSHRGGLHG--WD- 100 Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182 P H ++ Y+ Q E G S+T A+ L R+ D P +F Sbjct: 101 DVPP------HLVKYLASYVFVQAEFGLACPVSMTDAAARTL----RMFGD--PDVFGPW 148 Query: 183 YDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 D T+ AP + A + +TE + GTDIA ++ + D + L+G KWF S+P +D Sbjct: 149 IDALTSTAPDGAMTGA--MFMTEPQAGTDIARTETRAVRDGDA-WRLTGKKWFASNPDAD 205 Query: 242 AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 + LA+ G VG F+VP++L +G N RLK+K+G RS + E+ + Sbjct: 206 VIVTLARFPGGDDQSTRGVGMFMVPKVLANGERNSYTIDRLKDKLGTRSMPSGEVSLTGA 265 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 + +G+L+ + +M L +A+ S + MR ++ +A+ + R R V G L DQP+ Sbjct: 266 YAQQVGELDRGFRQMAEMVNTSRLSNAMRSSALMRRAVRDAVDHTRERVVFGKALFDQPL 325 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIA 413 M+ + +ALD AA AL A A + + A A R++ P+ K++ CK A V Sbjct: 326 MRATLLPLALDAEAALALVAYSAQCLQAADAGDDSAHALIRVLTPLAKHYICKRARIVTG 385 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 EAME GG+GYIEE + AR R++ SI GS N + LDVL + K Sbjct: 386 EAMEVRGGNGYIEEWAHARLVRDAHLGSIWEGSSNVIALDVLRCMRK 432 >gi|218674772|ref|ZP_03524441.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli GR56] Length = 172 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 79/146 (54%), Positives = 99/146 (67%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQ 71 M ++ D L LNQP L+ G+NAY SD L+V L A P + ++LE +G YV S AQ Sbjct: 1 MTSANRTDDKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ 60 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 ELARMAN PQL +GP GER D VEFHPAWHAL+RRS+ GLH S+WD + + + Sbjct: 61 ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADTDAKDE 120 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVT 157 AHK+RAAR YL AQLE+GHL ++T Sbjct: 121 AHKVRAARFYLTAQLESGHLCPLTMT 146 >gi|160897884|ref|YP_001563466.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160363468|gb|ABX35081.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 567 Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 134/454 (29%), Positives = 217/454 (47%), Gaps = 39/454 (8%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G N Y++DS L L+A + P V+ L+ E + + +E+ A A+ N P+L Sbjct: 27 GSNLYTTDSQLQPLLALYLPPEVNAHLQPYLERMGALAGREIDEWALTADRNPPELEHRD 86 Query: 89 PGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAARL 140 G ++ HPA+ + R + + GL WD P+ + A Sbjct: 87 RTGRDAQRIVKHPAYVEMERIAYGEFGLAVMSHRTGVLGWDGKLPPLAKY-------ALT 139 Query: 141 YLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL Q E G S+T A + P + + + P++ ++ + M Sbjct: 140 YLFVQAEFGLCCPLSMTDSLARTLRKYGEPALVEKYWPRMTQLRFEDQAQGAM------- 192 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 +TE+ G+DI+ + + +DG + LSG KWF S+P +D ++LA+VEG Sbjct: 193 --FMTEQAAGSDISNTQTLARPAADGSWRLSGDKWFCSNPDADFAMVLARVEGAPAGMKG 250 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+PR L+DGS N RLK+K+G RS A+ E+ +L+G+ + DM Sbjct: 251 ISLFLLPRRLDDGSANHYRIVRLKHKLGTRSMASGEIVLDGAVAYLVGEQGRGFVQMADM 310 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + + S MR ++AEA + AR R G L D P+M+R + + + A + Sbjct: 311 VNNSRLSNGVRSAGLMRRAVAEAEYVARERRAFGKALQDMPLMQRQLDKLRIYSEQARTM 370 Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + A + + + E+ AYA RI+ P+ K+ C+ A V +AME GG GYIEE S Sbjct: 371 VLQTAQALQRSDA-GEDGAYALLRILTPMIKFRACRDARKVTGDAMEVRGGCGYIEEWSD 429 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 R R+S SI G+ N + LDV+ +++ +L Sbjct: 430 PRLVRDSHLGSIWEGTSNIVALDVIRAIKREGSL 463 >gi|254822501|ref|ZP_05227502.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 592 Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 106/312 (33%), Positives = 168/312 (53%), Gaps = 35/312 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D + L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFVVLAKPEGAPDSSRGVAN 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ +GP + Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTAESGPADGKGL 312 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ L A+ + R +L E++ YAR+R GG LID+P+M+R +A++ +D+ Sbjct: 313 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAEMIVDV 372 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA AL F + + + RS RI P+TK C++ ++A+E GG+GYIE Sbjct: 373 EAAQALVFDGTGATNHRQPRS---LRQRIAVPVTKLKVCRLGITAASDAIEIHGGNGYIE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 +AR R++ N+I G N + LDV +E+ T E L + Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 473 Query: 487 LRDSISLCKEDK 498 LRD++S+ +D+ Sbjct: 474 LRDAVSVADDDE 485 >gi|296166929|ref|ZP_06849346.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897806|gb|EFG77395.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 590 Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 157/286 (54%), Gaps = 20/286 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D + L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERTGGSDLGALETTATRAGDS-WILNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAN 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ TGP + Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSGEPTGDTGPSDGKGL 312 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ L A+ + R +L E++ YARRRH GG LID+P+++R +A++ +D+ Sbjct: 313 GRMMELTNAARLGIALFGLGNARRALVESLCYARRRHAFGGALIDKPLIRRKLAEMIVDV 372 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A A+ F + R A RI P+TK C++ ++A+E GG GYIE Sbjct: 373 ESAQAMVF---DGTGATNHRQPRAMRQRIAVPVTKLKACRLGITAASDAIEIRGGIGYIE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 +AR R++ N+I G N + LDV +E+ T E L + L Sbjct: 430 TWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHEPLLARL 474 >gi|187923432|ref|YP_001895074.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187714626|gb|ACD15850.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 588 Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 136/466 (29%), Positives = 222/466 (47%), Gaps = 30/466 (6%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELEL----LGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++SD L+ + + ELE LG+ S A A+ N PQLH Sbjct: 20 GINFFTSDPDFARLLKLHLGDTLFDELESQLVSLGQRA-SSELDMWALSADKNPPQLHHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 GE ++ HP + AL R + L + + ++ A +L Q E Sbjct: 79 TRRGEALQSIDKHPDYVAL-ERVAYAELGLAAMSHETRDGKKSPPPLVKYALTFLFVQAE 137 Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 G S+T + L P + + P + SR++D + M +TE+ Sbjct: 138 FGLCCPVSMTDSLTRTLRKFGAPELVARFLPMLASRDFDTLFQGAM---------FMTEQ 188 Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGC 255 G+D+A I ++ +D + L G KWF S+ +D ++LA+ + +G Sbjct: 189 AAGSDVARIATRASLETDANGDETWRLYGDKWFCSNADADLAMVLARPDTAPAGINGLGL 248 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM + Sbjct: 249 FLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGALAYLIGEVGRGFHQMADMINM 308 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + + MR +L EA+H AR R G LID P+M+R + + L A ++ R Sbjct: 309 SRLSNGVRAAGLMRRALTEALHIARHREAFGRKLIDMPLMQRQLLKMMLPAEQARSMFMR 368 Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A ++A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 369 IALLLEQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARLV 428 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 R++ SI G+ N + LD+ ++ L E L + L+ LG++G Sbjct: 429 RDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRTYLQDLLGAAG 473 >gi|226362078|ref|YP_002779856.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240563|dbj|BAH50911.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 568 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 133/442 (30%), Positives = 213/442 (48%), Gaps = 25/442 (5%) Query: 34 MNAYSSDSLLVALIANFPSVVHKEL--ELLGEYVLSCTAQ--ELARMANYNTPQLHAYGP 89 MN +D L A++ + + ++ LLG + LA A+ N P L + Sbjct: 1 MNFAHTDPALRAVVDRWTAASERDKLNALLGRLGADAAGRLDALAATADKNPPVLEQFDR 60 Query: 90 GGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 G+R D++ +HPA+ L R + + GL R H ++ Y+ Q E Sbjct: 61 DGDRIDRISYHPAYQELCRAAYSEYGLSALSHRRGLHGWDAVPPHLVKYLASYVFVQAEF 120 Query: 149 GHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T A+ + + P V W + S E + ++ + +TE + Sbjct: 121 GLACPVSMTDAAARTLRMFGNPDVFGPWIDALTSTE---------PEGAMTGAMFMTEPQ 171 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLVP 259 GTDIA + ++ DG + L+G KWF S+P +D I LA+ G VG F+VP Sbjct: 172 AGTDIARTETVAERDGDG-WRLTGKKWFASNPDADVVITLARFPGGENHTTRGVGMFMVP 230 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++L +G N RLK+K+G RS + E+ + +G+L+ + +M L Sbjct: 231 KVLPNGERNSYTIDRLKDKLGTRSMPSGEVSLIGAYALQVGELDRGFRQMAEMVNTSRLS 290 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 +A+ S + MR ++ +A+ + R+R V G L DQP+M+ + +ALD AA AL A Sbjct: 291 NAMRSSALMRRAVRDAVDHTRQREVFGKKLFDQPLMRATLLPLALDAEAALALVAYSAQC 350 Query: 380 FDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 A + + A R++ P+ K++ CK A V E+ME GG+GYIEE + AR R++ Sbjct: 351 LQAADADDDSARGLIRVLTPLAKHYICKRARVVTGESMEVRGGNGYIEEWAHARLVRDAH 410 Query: 439 ANSILLGSGNAMVLDVLNLLEK 460 SI GS N + LDVL + K Sbjct: 411 LGSIWEGSSNVIALDVLRCMRK 432 >gi|70733886|ref|YP_257526.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68348185|gb|AAY95791.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 573 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 129/436 (29%), Positives = 214/436 (49%), Gaps = 30/436 (6%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N + D+ L AL+ + PS V+++ +++ + EL A A+ N P L Sbjct: 19 GINLFECDAGLAALLQVYLPSAVYQQWLPTLQHLGARAGGELDVLALSADKNPPVLQPRT 78 Query: 89 PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 GE + HP + L R + + GL P + I+ A YL Q E Sbjct: 79 RRGENLQSIAKHPDYVTLERVAFAELGLAAMSHQPGGPPPL------IKYALTYLFVQAE 132 Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 G S+T + L TP V + P++ S++++ + M +TE+ Sbjct: 133 FGLCCPVSMTDSLTRTLCKFGTPEVVARYLPQLQSQDFETLFQGAM---------FMTEQ 183 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE------GRVGCFLVP 259 G+D++ ++ ++ DG + L G KWF S+P +D ++LA+ E V FL+P Sbjct: 184 AAGSDVSRTETRA-RLEDGQWRLFGEKWFCSNPDADLAMVLARPEDAPPGMAGVTLFLLP 242 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++L DGS N QRLK+K+G+RS A+ E+ +L+G++ + DM + L Sbjct: 243 KVLPDGSRNHYRIQRLKDKLGSRSMASGEITLEGATAYLIGEVGRGFQQMADMINMSRLS 302 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + + MR L+EA++ AR+R G LI+ P+M+R + + L A ++ ++A+ Sbjct: 303 NGVRAAGLMRRGLSEALYIARQRRAFGKHLIEMPLMQRQLLKMMLPAEQARSMFMQIASL 362 Query: 380 FDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 A E A RI+ P+ K+ C+ A V +AME GG GYIEE S AR R++ Sbjct: 363 LPRADGGDETARKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRDAH 422 Query: 439 ANSILLGSGNAMVLDV 454 SI G+ N + LD+ Sbjct: 423 LGSIWEGTSNIVALDI 438 >gi|296159351|ref|ZP_06842176.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295890335|gb|EFG70128.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 588 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 130/433 (30%), Positives = 212/433 (48%), Gaps = 30/433 (6%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-- 134 A+ N PQL GE ++ HP + AL R + + + S E KQ+ Sbjct: 68 ADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAE---LGLAALSHETRDGKQSPPPL 124 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 ++ A +L Q E G S+T + L P + + PK+ SR++D + M Sbjct: 125 VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPKLASRDFDTLFQGAMF 184 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQ 248 +TE+ G+D+A I ++ SD + L G KWF S+ +D ++LA+ Sbjct: 185 ---------MTEQAAGSDVARIATRASLESDADGGQTWRLYGDKWFCSNADADLAMVLAR 235 Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + +G FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ Sbjct: 236 PDTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYLIGEV 295 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + DM + L + + + MR +L EA+H AR R G LID P+M+R + + Sbjct: 296 GRGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQLLKM 355 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGG 421 L A ++ R+A +A + +AA RI+ P+ K+ C+ A V +AME GG Sbjct: 356 MLPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGG 415 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG- 480 +GYIEE S AR R++ SI G+ N + LD+ ++ L E L + L LG++G Sbjct: 416 TGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLRDLLGAAGL 474 Query: 481 -KKVITILRDSIS 492 + +LR +++ Sbjct: 475 PPASLALLRSTLA 487 >gi|299530574|ref|ZP_07043994.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298721550|gb|EFI62487.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 569 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 40/475 (8%) Query: 13 NQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVL 66 +QVH + ++ A P P G N Y++D L +L+A + + + L+ +GE + Sbjct: 7 SQVHVMAQAVRAAAHPVPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGE-LA 65 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI------ 119 ELA +A+ N P L G+ ++ HPA+ L R + + GL Sbjct: 66 GGRIDELAGVADRNPPTLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDML 125 Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAP 176 W P+V+ A +L Q E G S+T + L TP + + P Sbjct: 126 GWSGKMPPIVKY-------ALTFLFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLP 178 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 ++ S +++ + M +TE+ G+DIA + +DG + L+G KWF S Sbjct: 179 QLLSLDWEKQAQGAM---------FMTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCS 229 Query: 237 SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +P ++ ++LA+VEG + FL+PR L+DGS N RLK+K+G +S A+ E+ Sbjct: 230 NPDAEFAMVLARVEGGAPGMKGISLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIR 289 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 +L+G+ + DM L + + S MR ++AEA A R G L Sbjct: 290 MDGAVAYLVGEQGRGFVQMADMVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLE 349 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAP 409 P+M+R + + + A + F+ A + + + +A A RI+ P+ K+ C+ A Sbjct: 350 QMPLMQRQLDKLRVPAEQARTMVFQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDAR 409 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 V +AME GG GYIEE S R R++ SI G+ N + LDV+ +++ +L Sbjct: 410 KVTGDAMEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAIKREGSL 464 >gi|240168573|ref|ZP_04747232.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 592 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 36/322 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 +TE+ GG+D+ A+ + + D + L+G KWF S+ +AF++LA+ EG V Sbjct: 194 MTERTGGSDLGALETTATRCGDA-WLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAS 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPVE---- 310 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ +GP + Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPQADSGPADGKGL 312 Query: 311 ----DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L +A +V R +L E++ Y R+R G L+D+P+++R +A++ +D+ Sbjct: 313 GRMMELTNKLRLGTASFAVGNARRALVESLCYTRQRRAFGEALVDKPLIRRKLAEMIVDV 372 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA AL F + R +A RI P+TK C++ ++A+E GG+GYIE Sbjct: 373 EAALALIF---DGTGAPNHRQPQAIRQRIAVPVTKLRVCRLGITAASDAVELHGGNGYIE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 +AR R++ N+I GS N + LDV +E+ + + ++ Sbjct: 430 TWPVARILRDAQVNTIWEGSDNILCLDVRRGMEQ----------------SRAHEPLLAR 473 Query: 487 LRDSISLCKEDKGLARFLTEKI 508 +RD++S+ +D+ R ++ +I Sbjct: 474 MRDAVSVSDDDE-TTRLVSRRI 494 >gi|293603574|ref|ZP_06685995.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292818010|gb|EFF77070.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 566 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 126/447 (28%), Positives = 215/447 (48%), Gaps = 27/447 (6%) Query: 33 GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N +++D AL + P+ +H LE LGE + ELA A+ + P L Sbjct: 20 GLNLFTADPYAAALSQRYLPTALHAHLLPHLERLGE-LAGGVMDELAATADKHPPTLSVR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAARLYL 142 G +V+ HPA+ L R + + ++ R EP+ A K + L++ Sbjct: 79 SRAGTDESRVDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPM--PAAAKYALSHLFV 136 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 A+ +S + + A + P + + P++ S+++D + M + Sbjct: 137 QAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDALRQGAM---------FM 187 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FL 257 TE+ G+D++A DG + + G KWF S+P + ++LA+ E + G FL Sbjct: 188 TEQGAGSDVSATEVTATAQPDGTWRIHGDKWFCSNPDAGFAMVLARSETQPGLKGVSLFL 247 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR LEDGS N R+K+K+G RS A+ E+ +L+G+ + DM Sbjct: 248 LPRDLEDGSHNHYRILRVKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMINNSR 307 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L + + + MR ++ EA++ ++ R G LID P+M+R + + + A + F+ A Sbjct: 308 LSNGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARTVMFQTA 367 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +A + A ARI+ P+ K+ C+ A V +AME GG GYIEE + R R++ Sbjct: 368 RALADADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLVRDA 427 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNL 464 SI G+ N + LDVL ++K +L Sbjct: 428 HLGSIWEGTSNIVALDVLRAIKKENSL 454 >gi|91782819|ref|YP_558025.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91686773|gb|ABE29973.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 587 Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 129/432 (29%), Positives = 215/432 (49%), Gaps = 29/432 (6%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK-- 134 A+ N PQL GE ++ HP + AL R + + + S E KQ+ Sbjct: 68 ADRNPPQLRHRTRRGEALQSIDKHPDYVALERVAYAE---LGLAALSHETRDGKQSPPPL 124 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 ++ A +L Q E G S+T + L P + + P++ SR++D + M Sbjct: 125 VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGAPELVARFLPRLASRDFDTLFQGAM- 183 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCLSGHKWFLSSPMSDAFIMLAQV 249 +TE+ G+D+A I ++ + +DG + L G KWF S+ +D ++LA+ Sbjct: 184 --------FMTEQAAGSDVARIATRASLETEADGQTWRLYGDKWFCSNADADLAMVLARP 235 Query: 250 E------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + +G FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ Sbjct: 236 DTAPPGINGLGLFLLPKTLPDGSRNSYRIVRLKDKLGSRSMASGEIVLEGAVAYLIGEVG 295 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + DM + L + + + MR +L EA+H AR R G LID P+M+R + + Sbjct: 296 RGFHQMADMINMSRLSNGVRAAGLMRRALTEALHIARNREAFGRKLIDMPLMQRQLLKMM 355 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 L A ++ R+A +A + +AA RI+ P+ K+ C+ A V +AME GG+ Sbjct: 356 LPAEQARSMFMRIALLLQQADAGDRQAAKCVRILTPLIKFRACRDARRVTGDAMEVRGGT 415 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-- 480 GYIEE S AR R++ SI G+ N + LD+ ++ L E L + L+ LG++G Sbjct: 416 GYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAAKRDGAL-EPLRAYLQDLLGAAGLP 474 Query: 481 KKVITILRDSIS 492 + +LR +++ Sbjct: 475 PASLALLRSTLA 486 >gi|221065963|ref|ZP_03542068.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220710986|gb|EED66354.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 568 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 134/455 (29%), Positives = 212/455 (46%), Gaps = 41/455 (9%) Query: 33 GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G N YS+DS L +L+ A+ + + L+ +GE + ELA +A+ N P L Sbjct: 28 GANFYSTDSELQSLLRLYLPADLLTHLQPYLQRMGE-LAGGRIDELAGIADRNPPTLEHR 86 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139 G+ ++ HPA+ L R + + GL W P V+ A Sbjct: 87 SRSGQDSQRIIKHPAYEELERIAYGEFGLQAISHRDDMLGWQGKMPPTVKY-------AL 139 Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 YL Q E G S+T + L T + + P++ S ++D + M Sbjct: 140 TYLFVQSEFGLCCPLSMTDSLTRTLKKFGTSELVDKYLPQLLSLDWDNQAQGAM------ 193 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 +TE+ G+DIA + DG + L+G KWF S+P ++ + LA+V+G Sbjct: 194 ---FMTEQAAGSDIANTQTMAYPQIDGSWRLTGDKWFCSNPDAEFAMALARVDGAPAGMK 250 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + FL+PR L+DGS N RLK+K+G +S A+ E+ +L+G+ + D Sbjct: 251 GISLFLLPRTLDDGSANLYRIIRLKDKMGTKSMASGEIRMEGATAYLVGEQGRGFVQIAD 310 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L + + S MR ++AEA A R G L D P+M+R + + + A Sbjct: 311 MVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLEDMPLMQRQLDKLRVPAEQART 370 Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + F+ A + + + EE AY RI+ P+ K+ C+ A V +AME GG GYIEE S Sbjct: 371 MVFQTAQTLMRSDA-GEEGAYPLLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 429 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 R R++ SI G+ N + LDV+ + + +L Sbjct: 430 DPRLVRDAHLGSIWEGTSNIVALDVIRAIRREGSL 464 >gi|118463683|ref|YP_879516.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254773280|ref|ZP_05214796.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|118164970|gb|ABK65867.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 589 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 36/312 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D + L+G KWF S+ +AFI+LA+ EG V Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFIVLAKPEGAPDNSRGVAN 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL + G D K L Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSG-EPTDGAASDGKGL 311 Query: 316 ---------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 L A+ + R +L E++ YAR+R GG LID+P+M+R +A++ +D+ Sbjct: 312 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDV 371 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + R RI P+TK C++ ++A+E GG+GYIE Sbjct: 372 EAAQAMVF---DGTGATNHRQPRGMRQRIAVPVTKLRVCRLGITAASDAIEIHGGNGYIE 428 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 +AR R++ N+I G N + LDV +E+ T E L + Sbjct: 429 NWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 472 Query: 487 LRDSISLCKEDK 498 LRD++S+ +D+ Sbjct: 473 LRDAVSVADDDE 484 >gi|264679498|ref|YP_003279405.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262210011|gb|ACY34109.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 569 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 40/475 (8%) Query: 13 NQVHQPSDSLFALNQP-PLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVL 66 +QVH + ++ A P P G N Y++D L +L+A + + + L+ +GE + Sbjct: 7 SQVHAMAQAVRAAAHPVPDRHGANFYATDPELQSLLALYLPADLLAHLQPYLQRMGE-LA 65 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI------ 119 ELA +A+ N P L G+ ++ HPA+ L R + + GL Sbjct: 66 GGRIDELAGVADRNPPTLEHRSRAGQDSQRIIKHPAYEELERIAYGEFGLQAISHREDML 125 Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAP 176 W P+V+ A +L Q E G S+T + L TP + + P Sbjct: 126 GWSGKMPPIVKY-------ALTFLFVQSEFGLCCPLSMTDSLTRTLKKYGTPELVGKYLP 178 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 ++ S +++ + M +TE+ G+DIA + +DG + L+G KWF S Sbjct: 179 QLLSLDWEKQAQGAM---------FMTEQAAGSDIAGTLTMAAPQADGSWLLTGDKWFCS 229 Query: 237 SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +P ++ ++LA+VEG + FL+PR L+DGS N RLK+K+G +S A+ E+ Sbjct: 230 NPDAEFAMVLARVEGGAPGMKGISLFLLPRSLDDGSTNRYRIIRLKDKLGTKSMASGEIR 289 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 +L+G+ + DM L + + S MR ++AEA A R G L Sbjct: 290 MDGAVAYLVGEQGRGFVQMADMVNNSRLSNGVRSAGMMRRAVAEAEFIAHERIAFGKRLE 349 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAP 409 P+M+R + + + A + F+ A + + + +A A RI+ P+ K+ C+ A Sbjct: 350 QMPLMQRQLDKLRVPAEQARTMVFQTAQTLMRSDAGQPDAYALLRILTPLIKFRACRDAR 409 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 V +AME GG GYIEE S R R++ SI G+ N + LDV+ +++ +L Sbjct: 410 KVTGDAMEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAIKREGSL 464 >gi|73539259|ref|YP_299626.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72122596|gb|AAZ64782.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 597 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 133/461 (28%), Positives = 214/461 (46%), Gaps = 47/461 (10%) Query: 33 GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G + Y++D L AL+ A+ +++ LE +GE ELA A+ N P L Sbjct: 27 GGSLYTADPDLRALLPLYLPADLLNLLQPHLERMGELA-GGVLDELALTADQNPPTLTHR 85 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139 G +V HPA+ L R + + ++ WD+ P + A Sbjct: 86 TRSGIDQQRVHKHPAYVELERVAFSEFGLAAVSHRGGVFGWDKPMPPAAKY-------AL 138 Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 Y++ Q E G S+T + L P + + + P + ++ ++ + M Sbjct: 139 TYMLVQAEFGLCCPLSMTDSLTRTLRKFGDPALVEKFLPNLTTQVFEDLYQGAMF----- 193 Query: 198 IGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG- 254 +TE+ G+D+AA ++ + ++G + LSG KWF S+P + ++LA+VE G Sbjct: 194 ----MTEQGAGSDVAATATRAMRDPQAEGGWRLSGDKWFCSNPDAALAMVLARVEDEAGN 249 Query: 255 ---------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 FL+PR L DGS N RLK+K+G RS A+ E+ +L+G+L Sbjct: 250 AVPGHKGVSLFLLPRTLSDGSANQYRIIRLKDKLGTRSMASGEIRLEGASAYLVGELGRG 309 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + DM L + + + MR +L E + A R G L D P+M+R + + L Sbjct: 310 FVQMADMINNSRLSNGVRAAGLMRRALTEGLFIAHERKAFGKRLEDMPLMRRQLLKLTLP 369 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A + F+ A + A + E+ AY RI+ P+ K+ C+ A V +AME GG G Sbjct: 370 TEQARTMVFQTAEALRRADA-GEDGAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCG 428 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 YIEE S AR R++ SI G+ N + LDVL + + +L Sbjct: 429 YIEEWSDARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 469 >gi|167570574|ref|ZP_02363448.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis C6786] Length = 591 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 135/449 (30%), Positives = 221/449 (49%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A + + EL LG S LA A+ N P LH Sbjct: 25 GVNFFTSDPDCAALLRLHLGDARY-RALEPELRALGLRA-SDELDRLASRADKNPPVLHP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + AL R + + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D ++ M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLSKADAGDEQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|316935141|ref|YP_004110123.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602855|gb|ADU45390.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 595 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 137/455 (30%), Positives = 215/455 (47%), Gaps = 50/455 (10%) Query: 29 PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83 P G+N Y +D L L+ + P + L+ LG + + AR+A+ +TP Sbjct: 24 PDTTGLNFYRADPSLADLLRIHLPKALVDHIEPHLDALGA-LAGGRLDDCARLADRHTPI 82 Query: 84 LHAYGPGGERWDKVEFHPAW-------------HALL-RRSIHDGLHCSIWDRSFEPVVR 129 LH G VE+HPA+ HAL R+ I D W + PV Sbjct: 83 LHQRDRFGRDVQSVEYHPAYRELENAAFGTFGIHALSHRKGIMD------WPEVY-PVTA 135 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 K A + L + E G +VT L K + ++ ++ D + Sbjct: 136 KHAFTL------LFNETEFGMGCPINVTDGCAKLL------SKFGSDELKAKYLDGLTQT 183 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLAQ 248 M K + G +TEK GG+D+ +TS +S+G + L G KWF S+ + ++LA+ Sbjct: 184 DMSKLTQG-GQFMTEKEGGSDVGTLTSIA--VSEGDHWRLYGEKWFCSNADAKVVMLLAR 240 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 EG VG FL+PR L+DG+PN RLK+K+G RS A+ E++ + +G L Sbjct: 241 PEGAGPGTRGVGLFLMPRFLDDGTPNHYRIVRLKDKLGTRSMASGEIKLEGAVAYAVGKL 300 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + + +M L + + S + MR + +AI A R V G +ID P+ +R + I Sbjct: 301 DRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIIDLPLARRQLMKI 360 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 L ++SF A++ D A+ S++ AA RI+ P K+ + A V +A+E GG Sbjct: 361 LLPTEQGMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGG 420 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GY+EE + AR R++ SI G+GN + +D L Sbjct: 421 IGYVEEFATARLLRDAHLGSIWEGTGNIVAIDALK 455 >gi|41406322|ref|NP_959158.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394670|gb|AAS02541.1| FadE35 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 589 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 36/312 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D + L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERTGGSDLGALETTATRHGDS-WLLNGFKWFASNCAGEAFVVLAKPEGAPDNSRGVAN 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL + G D K L Sbjct: 253 FLVLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSG-EPTDGAASDGKGL 311 Query: 316 ---------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 L A+ + R +L E++ YAR+R GG LID+P+M+R +A++ +D+ Sbjct: 312 GRMMELTNAARLGIALFGLGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVDV 371 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A+ F + R RI P+TK C++ ++A+E GG+GYIE Sbjct: 372 EAAQAMVF---DGTGATNHRQPRGMRQRIAVPVTKLRVCRLGITAASDAIEIHGGNGYIE 428 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 +AR R++ N+I G N + LDV +E+ T E L + Sbjct: 429 NWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETLLAR--------------- 472 Query: 487 LRDSISLCKEDK 498 LRD++S+ +D+ Sbjct: 473 LRDAVSVADDDE 484 >gi|91978083|ref|YP_570742.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91684539|gb|ABE40841.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 618 Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 140/456 (30%), Positives = 214/456 (46%), Gaps = 52/456 (11%) Query: 29 PLFIGMNAYSSDSLLVALIA-NFPS--VVHKE--LELLGEYVLSCTAQELARMANYNTPQ 83 P G+N Y +D L L+ + P V H E L+ LG S E AR A+ +TP Sbjct: 47 PDTTGLNFYRADPSLADLLRIHLPDALVRHIEPHLDRLGGLAGSVL-DEYARAADRHTPI 105 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135 LH G VE+HPA+ L + G+H W + PV K A + Sbjct: 106 LHQRDRFGRDAQYVEYHPAYRELENAAFGAFGIHALSHRQGIMGWPDVY-PVTAKHAFTL 164 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP----M 191 L + E G M P D K+ S+ D KA + Sbjct: 165 ------LFNEAEFG---------------MGCPINVTDGCAKLLSKFGDDALKAKYLDGL 203 Query: 192 QKTSVAI----GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 +T +A G +TEK GG+D+ +T+ + D + L+G KWF S+ + ++LA Sbjct: 204 TQTDMARLTQGGQFMTEKEGGSDVGTLTTVATRDGDH-WRLTGEKWFCSNADAKIVMLLA 262 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + EG VG FL+PR L+DGSPN RLK+K+G RS A+ E++ + +G Sbjct: 263 RPEGAGRGTRGVGLFLMPRFLDDGSPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGR 322 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L+ + +M L + + S + MR + +AI A+ R V G ++D P+ +R + Sbjct: 323 LDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVAKHRVVFGQRIVDLPLARRQLMK 382 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 I L ++SF A++ D A++ S++ AA RI+ P K+ + A +A+E G Sbjct: 383 ILLPTEQGMSISFLTADALDRAEAGSQDAAALLRILTPTLKFRATRDARKACGDALEMRG 442 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 G GY+EE + AR R++ SI G+GN + LD L Sbjct: 443 GIGYVEEFATARLLRDAHLGSIWEGTGNIVALDALK 478 >gi|213023909|ref|ZP_03338356.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 203 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 121/200 (60%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A+ + L P DW + S YD QK + IG+G+TEK+GG+D+ + T+ Sbjct: 4 AATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVLSNTTH 63 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 ++++D Y L GHKWF S P SDA ++LAQ +G + CF VPR L DG N + +RLK+ Sbjct: 64 AERLADDSYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKD 123 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+GNRSNA+ E+EF +T G+ LG+ + M + LD A+ S MR + + AI+ Sbjct: 124 KLGNRSNASAEVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIY 183 Query: 338 YARRRHVSGGILIDQPVMKR 357 +A +R G LI+QP+M++ Sbjct: 184 HAHQRQAFGKPLIEQPLMRQ 203 >gi|121608848|ref|YP_996655.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553488|gb|ABM57637.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 581 Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 48/470 (10%) Query: 33 GMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G N ++SD+ L L+A + P ++ E LG + LA++A+ N P+L Sbjct: 15 GQNLFTSDTQLHGLLALYLPPDLLRHMQPHFERLGA-LAGGRLDALAQVADQNPPRLEHR 73 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139 G ++ HPA+ + R + + GL W P+V+ Sbjct: 74 TRTGIDAQRIVKHPAYVEMERMAFSEFGLAAMSHRQETLGWKGRMPPIVKYLL------- 126 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 YL Q E G L P S S+ + +P + + P++ + ++D + M Sbjct: 127 TYLFVQAEFG-LCCPVSMSDSLARTLGKFGSPELIGRFLPRLQALDFDQLAQGAM----- 180 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---- 252 +TE+ G+DIAA ++ + G++ LSG KWF S+P +D ++LA+ + Sbjct: 181 ----FMTEQAAGSDIAATQTRAWQDGQGLWRLSGDKWFCSNPDADLAMVLARPDAAPAGM 236 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + FL+PR LEDGS N RLK+K+G RS A+ E+ +L+G + Sbjct: 237 QGLSLFLLPRRLEDGSANHYRIIRLKDKLGTRSMASGEIRLEGAVAYLVGQAGRGFQQMA 296 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 DM L + + + MR +LAEA A R G L D P+M+R + + L A Sbjct: 297 DMVNNSRLSNGVRAAGLMRRALAEAEFIASERLAFGQRLADMPLMQRQLDKLRLPTEQAR 356 Query: 371 ALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 ++ F+ A + A + AYA RI+ P+ K+ C+ A V +AME GG GYIEE Sbjct: 357 SMVFQTAQALARADG-GDAGAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEW 415 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 S R R++ SI G+ N + LDV+ + + EQ L++ G+ Sbjct: 416 SDPRLVRDAHLGSIWEGTSNIVALDVMRAIRR-----EQALPALQRHFGA 460 >gi|260903971|ref|ZP_05912293.1| putative acyl-CoA dehydrogenase [Brevibacterium linens BL2] Length = 570 Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 215/467 (46%), Gaps = 42/467 (8%) Query: 34 MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQE----LARMANYNTPQLHAYGP 89 MN D L LI ++ +EL L A + LA +A+ N P+L + Sbjct: 1 MNYVDLDPALQPLIESYLESADRELLAPVLTALGADAAQRLAPLADVADKNPPRLEQFNR 60 Query: 90 GGERWDKVEFHPAWHALLRRSI---------HDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 G+R D +++H ++ L + + H GLH WD P H ++ Sbjct: 61 EGDRVDTIDYHHSYQELQKAAYEEYGLSALSHRGLHG--WD-DVPP------HLVKYILS 111 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAI 198 Y+ Q E G S+T A+ L + + ++ S + D M Sbjct: 112 YVFVQAEFGLACPVSMTDAAARTLRKFGDGEQIAEAIDRLISTDSDHRFTGAM------- 164 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------R 252 +TE GTDIA ++ ++ + + LSG KWF S+P +D + LA+ G Sbjct: 165 --FMTEIHAGTDIAQTSTVAERDGEN-WALSGRKWFASNPDADIILTLARFPGGDDTTRG 221 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VG F++P+ DG+ N RLK+K+G RS + E+ + + +G L + +M Sbjct: 222 VGLFMLPKHRPDGTKNSYVIDRLKDKLGTRSMPSGEVTLNGAYAVQVGALERGFLQMAEM 281 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L +A+ + + MR S+ EA+ +AR+R V G LI+ P+M+ + + + AA L Sbjct: 282 VNTSRLSNAMRATALMRRSINEALAHARQRVVFGKALIEAPLMRMTLLPLQAEAEAALGL 341 Query: 373 SFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 F + +A + AA R++ P+ K++ CK A V EAME GG GYIEE A Sbjct: 342 VFYAGDMLQKADAGDASAAAQIRVLTPLAKHYICKRARFVTGEAMEVRGGRGYIEEFPDA 401 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 R R+S SI GS N + LDVL + K N + L T+ Q L + Sbjct: 402 RLVRDSHLGSIWEGSSNVIALDVLRCIRK-QNTHQLLAETMTQKLNT 447 >gi|254503869|ref|ZP_05116020.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222439940|gb|EEE46619.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 595 Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 128/442 (28%), Positives = 206/442 (46%), Gaps = 32/442 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y D L L++ + P + LE E + E+ +RMA+ + P LH Sbjct: 25 GLNFYGIDKSLEDLVSLYLPDDLRAHLEPHLEKFGALVGDEVDDWSRMADKHIPVLHHRD 84 Query: 89 PGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 P G D +EFHPA+ + ++ D GL I + +H ++ Y+ Q E Sbjct: 85 PRGRFEDWIEFHPAYRNMEDVALGDYGLAAMIHKPGMFGWDKPMSHTVKFIFQYIFGQSE 144 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G L S T TT + KD+ + + + KT + +TE+ G Sbjct: 145 FGQLCPISATE-------TTATLIKDYGDEATKARFYDGLTSQDTKTMLKGAQFMTERPG 197 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRL 261 G+D++ I + + DG + L G KWF S D ++LA+ +G +G F +PR Sbjct: 198 GSDVSNIQLEA-RFEDGNWKLYGEKWFCSCTDGDVALLLARPQGAPAGNKGLGLFALPRR 256 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 L+DGS N RLKNK+G+RS A+ E+ F + LG++ GP E+ + + +D Sbjct: 257 LDDGSRNSYRIVRLKNKLGSRSMASGEIVFDGAVAYPLGEV----GPHENKGLKMMMDQV 312 Query: 322 IMS--------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +S + MR L EA+ A+ RH +ID+P+++R + + + A +++ Sbjct: 313 SLSRLSHGCRAAAMMRRCLNEALVTAQNRHAFQEKIIDKPLLRRQLMKLMVPTEQALSIT 372 Query: 374 FRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 L N A++ E A RI+ P KY + V AME GG+GYIE+ AR Sbjct: 373 LYLGNQISLAEAGDERAQKITRILTPAHKYRTARDNVRVATGAMEVRGGNGYIEDFVNAR 432 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R++ + G+ N LD+ Sbjct: 433 LVRDAHLGVLWEGTSNINSLDI 454 >gi|239815089|ref|YP_002943999.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239801666|gb|ACS18733.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 569 Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 138/472 (29%), Positives = 219/472 (46%), Gaps = 41/472 (8%) Query: 16 HQPSDSLFALNQPPLFIGMNAYSSDS-----LLVALIANFPSVVHKELELLGEYVLSCTA 70 H D A++ P G + Y+ D+ L V L A+ + + E LG + Sbjct: 4 HAAIDGGTAVHPVPDRHGRSLYAEDAELHRLLAVYLPADLLAHMRPHFERLGT-LAGGRL 62 Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDR 122 ELA A+ N P L G +V HPA+ + R ++ + GL W Sbjct: 63 DELAHTADRNPPTLTLRTRTGIDDPQVHKHPAYVEMERLALSEFGLAAMSHREDTLGWKG 122 Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFS 180 P+V+ YL Q E G S+T A + +P + + + P+ S Sbjct: 123 RMPPLVKY-------VLTYLFVQAEFGLCCPVSMTDSLARTLKKFGSPELVERFLPRFQS 175 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 ++D + M +TE+ G+DIAA ++ + G + L+G KWF S+P + Sbjct: 176 LDFDMLAQGAMF---------MTEQAAGSDIAATETRAWQDEQGQWRLAGDKWFCSNPDA 226 Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D ++LA+V+G V FL+PR L+DGS N RLK+K+G RS A+ E+ Sbjct: 227 DFAMVLARVDGGPPGMKGVSLFLLPRRLDDGSANRYRILRLKDKLGTRSMASGEIRLEGA 286 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 +L+G+ + DM L + + + MR ++AEA + A R G L D P+ Sbjct: 287 LAYLVGEQGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAHERRAFGRRLEDMPL 346 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVI 412 M+R + + L A ++ F+ A + + S E AY RI+ P+ K+ C+ A V Sbjct: 347 MQRQLDKLRLPAEQARSMLFQTAQALARSDS-GESTAYPLLRILTPLIKFRACRDARKVT 405 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +AME GG GYIEE S R R++ SI G+ N + LDV+ +++ +L Sbjct: 406 GDAMEVRGGCGYIEEWSDPRLLRDAHLGSIWEGTSNIVALDVIRAVKREGSL 457 >gi|167567257|ref|ZP_02360173.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis EO147] Length = 589 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 134/449 (29%), Positives = 220/449 (48%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A + + EL LG S LA A+ N P LH Sbjct: 23 GVNFFTSDPDCAALLRLHLGDARY-RALEPELRALGLRA-SDELDRLASRADKNPPVLHP 80 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + AL R + + GL S D + P+V+ A +L Sbjct: 81 RTRRGEPLESIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 133 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D ++ M + Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLHQGAMF---------M 184 Query: 203 TEKRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 185 TEQAAGSDVGRIATRAVRETAADGATTWRLYGDKWFCSNADADLAMVLARPEGAPDGVKG 244 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEITLDGAEAYLIGEIGRGFHQMADM 304 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMRRQLVKMLVPTEQARSL 364 Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 365 FMQIALLLSKADAGDGQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453 >gi|319762662|ref|YP_004126599.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330824803|ref|YP_004388106.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] gi|317117223|gb|ADU99711.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329310175|gb|AEB84590.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] Length = 568 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 127/454 (27%), Positives = 215/454 (47%), Gaps = 41/454 (9%) Query: 34 MNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQLHAYG 88 +N Y+ D L +L+A + P+ +H L E +GE + + A+ A+ N P L Sbjct: 28 VNYYTGDGELQSLLALYLPADLHAHLQPYFERMGE-LAGGAVDDWAQEADRNPPTLEMRS 86 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARL 140 G+ ++ HPA+ + + + +I W P+V+ A Sbjct: 87 RAGKEQQRIVKHPAYVEMEKVAFQQFGLAAISHREDMLGWKGKMPPIVKY-------ALT 139 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL Q E G S+T + L P + + P++ + ++D +SV Sbjct: 140 YLFVQSEFGLCCPLSMTDSLTRTLKKYGAPELVNKYLPRLLAMDFD---------SSVQG 190 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 + +TE+ G+DIA + DG + L G KWF S+P + ++LA+V+G Sbjct: 191 SMFMTEQAAGSDIANTLTMAYPQEDGSWRLYGEKWFCSNPDAGFSMVLARVDGGPPGMKG 250 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+PR+ +DGS N RLK+K+G RS A+ E+ +L+G+ + DM Sbjct: 251 ISLFLLPRIKDDGSTNHYHIVRLKDKMGTRSMASGEIRMEGAVAYLVGEQGRGFVQIADM 310 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + + S MR ++AEA AR R G L D P+M+ + + + A + Sbjct: 311 VNNSRLSNGMRSAGMMRRAVAEAEFIARERWAFGRRLQDLPLMRVQLDKLRVPAEQARTM 370 Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 F+ A + + + +++AYA RI+ P+ K+ C+ A V +AME GG GYIEE + Sbjct: 371 VFQTAATLARSDA-GDKSAYALLRILTPMIKFRACRDARKVAGDAMEVRGGCGYIEEWAD 429 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 R R++ SI G+ N + LDV+ +++ +L Sbjct: 430 PRLVRDAHLGSIWEGTSNIVALDVVRAIKREGSL 463 >gi|78066938|ref|YP_369707.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77967683|gb|ABB09063.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 583 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 139/466 (29%), Positives = 224/466 (48%), Gaps = 42/466 (9%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++ D L AL+ + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV-SGELDEWASRADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL S S P+V+ A +L Q Sbjct: 79 NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGSESVPPLVKY-------ALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G S+T + L P + + P + SR++D + M +T Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDFDTLYQGAMF---------MT 182 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 E+ G+D+A I ++ + +D ++ L+G KWF S+ +D ++LA+ +G + Sbjct: 183 EQAAGSDVARIATRATRETDALGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLLKMLLPAEAARAMF 362 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 R++ SI G+ N + LDV ++ EQ L LG Sbjct: 423 VVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALRAFLGD 463 >gi|220920693|ref|YP_002495994.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219945299|gb|ACL55691.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 564 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 136/458 (29%), Positives = 213/458 (46%), Gaps = 48/458 (10%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELE--------LLGEYVLSCTAQELARMANYNTPQ 83 G+N Y +D AL + P + + L+ L G ++ ELA A+ N P Sbjct: 16 GLNLYRADRDAAALFGFYMPDTLFRHLDPHLDRLGALAGGHL-----DELAATADRNPPT 70 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAA 138 L GE VE HPA+ + R + + ++ R EP++ + + Sbjct: 71 LRLRRRTGEDCAIVEKHPAYVEMERLAYAEFGLAALSHRGGVLGWPEPMLPAAKYAL--- 127 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA--PKIFSR----EYDPTNKAPMQ 192 YL Q E G S+T + L T + + D A + FSR ++D + M Sbjct: 128 -TYLFVQAEFGLCCPVSMTDS----LTRTLKRYGDPALVERFFSRLTSLDFDTLAQGAMF 182 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-- 250 +TE+ G+D+AA T++ ++ +DG + L+G KWF S+ +D ++LA+ E Sbjct: 183 ---------MTEQGAGSDVAATTTRAEEQADGTWRLTGDKWFCSNADADLAMVLARSEPV 233 Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 V FL+P+ DG PN RLK+K+G RS A+ E+ +L+G+ Sbjct: 234 SGLKGVSLFLLPKQRRDGLPNDFRILRLKDKLGTRSMASGEIRLEGAEAYLVGERGRGFH 293 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + DM L + + + MR + EA+ A RR G LI P+M+R +A + + Sbjct: 294 QMADMINNSRLSNGVRAAGLMRRAATEALFIACRRQAFGRPLIALPLMRRQLAKMLVWTE 353 Query: 368 AATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + F A++ A EAA RI+ P+ K+ C+ A V +AME GG GYIE Sbjct: 354 QARTMVFLTADALHRANGGDPEAARLTRILTPLIKFRACRDARRVTGDAMEVRGGCGYIE 413 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E S R R++ SI G+ N + LDVL + + T L Sbjct: 414 EWSDPRLVRDAHLGSIWEGTSNIVALDVLRAITRDTAL 451 >gi|311104130|ref|YP_003976983.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310758819|gb|ADP14268.1| acyl-CoA dehydrogenase, middle domain protein 3 [Achromobacter xylosoxidans A8] Length = 566 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 124/445 (27%), Positives = 209/445 (46%), Gaps = 23/445 (5%) Query: 33 GMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G N +S+D AL + P+ +H LE LG + ELA A+ + P L Sbjct: 20 GQNLFSADPYAEALSRRYLPAALHAHLLPHLERLGA-LAGGVMDELAATADKHPPTLSVR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE---PVVRKQAHKIRAARLYLMA 144 G +++ HPA+ L R + + ++ R P A K + L++ A Sbjct: 79 SRAGTDESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEPMPAAAKYALSHLFVQA 138 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 + +S + + A + P + + P++ S+++D + M +TE Sbjct: 139 EFGLCCPVSMTDSLARTLRKFGDPELVERVLPEVTSQDFDTLRQGAM---------FMTE 189 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-----FLVP 259 + G+D++A DG + + G KWF S+P + ++LA+ E + G FL+P Sbjct: 190 QGAGSDVSATEVTATAQDDGTWLIHGDKWFCSNPDAGYAMVLARSEAQPGLKGVSLFLLP 249 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 R L DGS N RLK+K+G RS A+ E+ +L+G+ + DM L Sbjct: 250 RDLADGSHNHYRILRLKDKLGTRSMASGEIRLEGAVAWLVGERGRGFKHMADMINNSRLS 309 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + + MR ++ EA++ ++ R G LID P+M+R + + + A ++ F+ A + Sbjct: 310 NGMRAAGLMRRAVTEAVYVSQHRRAFGKRLIDMPLMQRQLVKMTVWAEQARSVMFQTARA 369 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A + A ARI+ P+ K+ C+ A V +AME GG GYIEE + R R++ Sbjct: 370 LAGADQGVADPALARILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWTEPRLVRDAHL 429 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNL 464 SI G+ N + LDVL + K +L Sbjct: 430 GSIWEGTSNIVALDVLRAINKENSL 454 >gi|296387903|ref|ZP_06877378.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 575 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 132/457 (28%), Positives = 214/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E++ + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLEWLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL R + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|192290292|ref|YP_001990897.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192284041|gb|ACF00422.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 595 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 135/449 (30%), Positives = 211/449 (46%), Gaps = 38/449 (8%) Query: 29 PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83 P G+N Y +D L L+ + P+ + L+ LG + E AR+A+ +TP Sbjct: 24 PDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGA-LAGGRLDECARLADRHTPI 82 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135 LH G VE+HPA+ L + G+H W + PV K A + Sbjct: 83 LHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVY-PVTAKHAFTL 141 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 L + E G +VT L D A K ++ D + M K + Sbjct: 142 ------LFNETEFGMGCPINVTDGCAKLLSK----FGDEALK--AKYLDGLTQTDMSKLT 189 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252 G +TEK GG+D+ +TS + DG + L G KWF S+ + ++LA+ EG Sbjct: 190 QG-GQFMTEKEGGSDVGTLTSVA--VPDGDHFRLYGEKWFCSNADAKVVMLLARPEGAGP 246 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 VG FL+PR L+DG PN RLK+K+G RS A+ E++ + +G L+ Sbjct: 247 GTRGVGLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 306 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M L + + S + MR + +AI A R V G ++D P+ +R + I + Sbjct: 307 MAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQ 366 Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++SF A++ D A+ S++ AA RI+ P K+ + A V +A+E GG GY+EE Sbjct: 367 GMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEE 426 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456 + AR R++ SI G+GN + +D L Sbjct: 427 FATARLLRDAHLGSIWEGTGNIVAIDALK 455 >gi|39934769|ref|NP_947045.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39648619|emb|CAE27140.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 595 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 135/449 (30%), Positives = 211/449 (46%), Gaps = 38/449 (8%) Query: 29 PLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQ 83 P G+N Y +D L L+ + P+ + L+ LG + E AR+A+ +TP Sbjct: 24 PDTTGLNFYRADPSLADLLRIHLPNALVDHIEPHLDRLGA-LAGGRLDECARLADRHTPI 82 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-------SIWDRSFEPVVRKQAHKI 135 LH G VE+HPA+ L + G+H W + PV K A + Sbjct: 83 LHQRDRFGRDAQYVEYHPAYRELEAAAFGTFGIHALSHRKGIMGWPDVY-PVTAKHAFTL 141 Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 L + E G +VT L D A K ++ D + M K + Sbjct: 142 ------LFNETEFGMGCPINVTDGCAKLLSK----FGDEALK--AKYLDGLTQTDMSKLT 189 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252 G +TEK GG+D+ +TS + DG + L G KWF S+ + ++LA+ EG Sbjct: 190 QG-GQFMTEKEGGSDVGTLTSVA--VPDGDHFRLYGEKWFCSNADAKVVMLLARPEGAGP 246 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 VG FL+PR L+DG PN RLK+K+G RS A+ E++ + +G L+ Sbjct: 247 GTRGVGLFLMPRFLDDGMPNHYRIVRLKDKLGTRSMASGEIKLEGAIAYAVGKLDRGFVQ 306 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M L + + S + MR + +AI A R V G ++D P+ +R + I + Sbjct: 307 MAEMVNSSRLSNGVKSTALMRRAWHDAITVANNRVVFGSRIVDLPLARRQLMKILVPTEQ 366 Query: 369 ATALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++SF A++ D A+ S++ AA RI+ P K+ + A V +A+E GG GY+EE Sbjct: 367 GMSISFLTADALDRAEGGSQDAAALLRILTPTLKFRATRDARKVCGDALEMRGGIGYVEE 426 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456 + AR R++ SI G+GN + +D L Sbjct: 427 FATARLLRDAHLGSIWEGTGNIVAIDALK 455 >gi|183985329|ref|YP_001853620.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M] gi|183178655|gb|ACC43765.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium marinum M] Length = 598 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 141/492 (28%), Positives = 228/492 (46%), Gaps = 62/492 (12%) Query: 32 IGMNAYSSDSLLVALIANF--P---SVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 +G+N Y +D L + +A + P +VV L GE + A+ A + + P+L Sbjct: 36 VGLNWYLTDPTLRSTVAYYLQPDELAVVEPHLIRAGELMGGAVAR-WAEETDRDPPRLQR 94 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 Y G ++ PA +R++ D ++ D + +R A+ YL+ Q Sbjct: 95 YDRWGHDVSRI-VMPASFTQSKRAVLDA-QAALRDEARGAGMRPTVALFAAS--YLLNQA 150 Query: 147 EAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 + G L + + S+VA V K S E+ A + LT Sbjct: 151 DIGMGCALGTGAGMVQSLVAAFAPADVRDHVLAKFDSGEW-AGETAQL----------LT 199 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFL 257 E+ GG+D+ A+ + + D + L+G KWF S+ AF++LA+ EG V FL Sbjct: 200 ERTGGSDLGALETTATRDGDS-WRLNGFKWFASNCAGQAFVVLAKPEGAPDTTRGVANFL 258 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNVSTGP----- 308 V R DGS NG+ +RLK+K+G RS A+ E+EF + FLL GP Sbjct: 259 VLRTRRDGSRNGVRVRRLKDKLGTRSVASGEVEFVDAEAFLLSAEPSGPQALAGPSGGRG 318 Query: 309 ---VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + ++ L A ++ R +L E++ YAR+R GG LID+P+M+R +A++ +D Sbjct: 319 LARMMELTNAARLGIASFALGNARRALVESLCYARQRRAFGGALIDKPLMRRKLAELIVD 378 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L F + A R RI P+TK C++ + ++A+E GG+GY+ Sbjct: 379 VEAAQTLVF---DGLGVANHRQPRTIRQRIAVPVTKLKVCRLGISAASDAIEIHGGNGYV 435 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485 E +AR R++ N+I G N + LDV +E+ T+ E L + Sbjct: 436 ENWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TSAHETLLAR-------------- 480 Query: 486 ILRDSISLCKED 497 LRD++S+ D Sbjct: 481 -LRDAVSVADRD 491 >gi|115352248|ref|YP_774087.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria AMMD] gi|115282236|gb|ABI87753.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD] Length = 584 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 138/485 (28%), Positives = 232/485 (47%), Gaps = 39/485 (8%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66 MN + D+ + N P G+N +++D L AL+ A + + +L LG V Sbjct: 1 MNDTARTPDAGASGNIPD-SRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 S E A A+ + P L GE +++ PA+ AL R + + + S +P Sbjct: 59 SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAE---LGLAALSHQP 115 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184 A ++ A +L Q E G S+T + L P + + + P++ SR++D Sbjct: 116 --DAVAPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPRLASRDFD 173 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMS 240 + M +TE+ G+D+ I ++ + + + ++ L G KWF S+ + Sbjct: 174 TLFQGAMF---------MTEQAAGSDVGRIATRAVRDTHTSGEAVWRLYGDKWFCSNADA 224 Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D ++LA+ +G + FL+P+ L DG+ N RLK+K+G+RS A+ E+ Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYGIVRLKDKLGSRSMASGEIALEGA 284 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 +L+G++ + DM + L + + + MR +L E++H A R G LI+ P+ Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMPL 344 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413 M+R + + L AA A+ ++A EA + E+AA RI+ P+ K+ C+ A V Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPEADAGDEQAARCVRILTPLIKFRACRDARRVTG 404 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 +AME GG+GYIEE S AR R++ SI G+ N + LDV ++ EQ L Sbjct: 405 DAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALR 459 Query: 474 QDLGS 478 LG Sbjct: 460 TFLGD 464 >gi|254247749|ref|ZP_04941070.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124872525|gb|EAY64241.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 583 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 135/465 (29%), Positives = 225/465 (48%), Gaps = 34/465 (7%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++ D L AL+ + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTVDPDLGALLKLHLGDAHYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 GE +++ PA+ AL R + L + S E V ++ A +L Q E Sbjct: 79 NRRGEAVQRIDKDPAYVAL-ERVAYAELGLASLSHSAETV----PPLVKYALTFLFVQAE 133 Query: 148 AGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 G S+T + L P + + P++ SR++D + M +TE+ Sbjct: 134 FGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDFDTLYQGAMF---------MTEQ 184 Query: 206 RGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 G+D+ I ++ +D ++ L+G KWF S+ +D ++LA+ +G + Sbjct: 185 AAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGLAL 244 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + Sbjct: 245 FLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMINM 304 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ + Sbjct: 305 SRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMPLMQRQLMKMLLPAEAARAMFMQ 364 Query: 376 LANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 365 IALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARLV 424 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 R++ SI G+ N + LDV ++ + + L + L LG++ Sbjct: 425 RDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468 >gi|15598789|ref|NP_252283.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|9949748|gb|AAG06981.1|AE004779_13 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] Length = 575 Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL R + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|107103107|ref|ZP_01367025.1| hypothetical protein PaerPA_01004176 [Pseudomonas aeruginosa PACS2] gi|254236509|ref|ZP_04929832.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719] gi|126168440|gb|EAZ53951.1| hypothetical protein PACG_02506 [Pseudomonas aeruginosa C3719] Length = 575 Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL R + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|116051591|ref|YP_789571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115586812|gb|ABJ12827.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 575 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 132/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL R + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|259415587|ref|ZP_05739508.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] gi|259348817|gb|EEW60579.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] Length = 577 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 138/476 (28%), Positives = 221/476 (46%), Gaps = 29/476 (6%) Query: 29 PLFIGMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTP 82 P G+NA+ +D L L A++ + EL+ +G L+ +ELA A+ N P Sbjct: 10 PDSAGLNAFDADRALQDLAWLYLEKADYTRAL-PELQRMGS--LTQQLEELALTADKNPP 66 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLY 141 L G +++ HPA+ L R + + GL K ++ A +Y Sbjct: 67 TLQIRARNGADLERIHKHPAYVELERYAFGEFGLAAMSHRGGVFGAPDKLPPMVKYALVY 126 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 L Q E G S+T + L+ K + ++ + +D M T + Sbjct: 127 LFVQAEFGLCCPLSMTDSLTRTLV------KFGSEELVNTYFDQLTSQDMD-TVFQGAMF 179 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 +TE+ G+D+ AI + ++ DG + L G KWF S+P + ++LA+ EG + Sbjct: 180 MTEQAAGSDVGAIDTTA-RLEDGEWKLYGDKWFCSNPDAALGMVLARPEGGDAGTRGLSL 238 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FL+PR L DGS N RLK K+G +S A+ E+ +L+GD + DM + Sbjct: 239 FLLPRTLPDGSKNAYRILRLKEKMGTKSMASGEITLDGATAYLVGDPGQGFKQMTDMINM 298 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + S MR +++EA+ ++ R G LID P+M+R + + + ++ F Sbjct: 299 SRLANGVRSAGLMRRAVSEALFISKNRTAFGKRLIDLPLMRRQLMKMLVTAEQGRSMVFH 358 Query: 376 LANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + + ++ A RI+ P+ K+ C+ A V +AME GG GYIEE S AR Sbjct: 359 TAKVLQASDAGDAKMAKVLRILTPLIKFRTCRDARKVAGDAMEVRGGCGYIEEWSDARVL 418 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF---STLEQDLGSSGKKVITIL 487 R++ SI G+ N + LDV + L + LF STL + S G V IL Sbjct: 419 RDAHLGSIWEGTSNIVALDVARATRREGAL-DALFDYCSTLLTEAASKGLMVGDIL 473 >gi|241663140|ref|YP_002981500.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240865167|gb|ACS62828.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 587 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/420 (29%), Positives = 201/420 (47%), Gaps = 28/420 (6%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 + +L+ LG+ V S A A++N PQL GE ++ HP + AL R + Sbjct: 50 LEPQLKSLGQRV-SDELDAWAISADHNPPQLRHRTRRGEALQTIDKHPDYVALERVA--- 105 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171 + + S V ++ A YL Q E G S+T + L P + Sbjct: 106 --YAELGLASMSHVGNASPPLVKYALTYLFVQAEFGLCCPVSMTDSLTRTLRKFGDPALL 163 Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGI--YC 227 + P + SR++D + M +TE+ G+D+A I ++ + DG + Sbjct: 164 ARYLPMLASRDFDVLYQGAM---------FMTEQAAGSDVARIATRAALETAPDGTQTWR 214 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 L G KWF S+ +D ++LA+ +G + FL+P+ L DGS N RLK+K+G Sbjct: 215 LYGDKWFCSNADADLAMVLARPDGAPSGINGLALFLLPKTLRDGSRNHYRIVRLKDKLGT 274 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 RS A+ E+ +L+G++ + DM + L + + + MR + EA+H AR Sbjct: 275 RSMASGEIALEGATAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHIARN 334 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPIT 400 R G LID P+M+R + + L A ++ ++A A + +AA RI+ P+ Sbjct: 335 REAFGRKLIDMPLMQRQLLKMLLPTEQARSMFMQIAQLLPLADAGDAQAAKCVRILTPLI 394 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K+ C+ A V +AME GG+GYIEE S AR R++ SI G+ N + LD+ +++ Sbjct: 395 KFRACRDARRVTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAVKR 454 >gi|317402306|gb|EFV82883.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 566 Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 126/463 (27%), Positives = 216/463 (46%), Gaps = 28/463 (6%) Query: 18 PSDSLFALNQP-PLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQ 71 P+ A P P G+N + +D L + P+ +H L+ LGE + Sbjct: 4 PAQPAVATATPVPDARGLNLFRADPYAAPLARRYLPAALHAHLLPHLDRLGE-LAGGVMD 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EP 126 ELA A+ + P L G +++ HPA+ L R + + ++ R EP Sbjct: 63 ELAATADKHPPTLSVRSRAGADESRIDKHPAYVELERLAYSEFGLAALSHRGGVLGWPEP 122 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 + A K + L++ A+ +S + + A + P + + P++ S+++D Sbjct: 123 M--PAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGDPALVERVLPQVTSQDFDAL 180 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246 + M +TE+ G+D++A + DG + + G KWF S+P + ++L Sbjct: 181 RQGAMF---------MTEQGAGSDVSATEVTATRQDDGSWRIHGDKWFCSNPDAGFAMVL 231 Query: 247 AQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 A+ E G FL+PR L DG+ N RLK+K+G RS A+ E+ +L+G+ Sbjct: 232 ARSESEPGLKGVSLFLLPRDLADGTHNHYRILRLKDKLGTRSMASGEIRLEGAVAWLVGE 291 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + DM L + + + MR ++ EA + ++ R G LID P+M+R + Sbjct: 292 RGKGFKHMADMINNSRLSNGMRAAGLMRRAVTEATYVSQHRRAFGKRLIDMPLMQRQLVK 351 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A ++ F+ A + +A + A ARI+ P+ K+ C+ A V +AME GG Sbjct: 352 MTVWSEQARSVMFQTARALADADQGRGDPALARILTPLIKFRACRDARKVTGDAMEVRGG 411 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 GYIEE + R R++ SI G+ N + LDVL + K +L Sbjct: 412 CGYIEEWTEPRLVRDAHLGSIWEGTSNIVALDVLRAIRKEGSL 454 >gi|313108949|ref|ZP_07794925.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310881427|gb|EFQ40021.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 575 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 128/435 (29%), Positives = 205/435 (47%), Gaps = 28/435 (6%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLVPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL R + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALERVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDV 454 SI G+ N + LDV Sbjct: 425 GSIWEGTSNIVALDV 439 >gi|107028660|ref|YP_625755.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116690181|ref|YP_835804.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897824|gb|ABF80782.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116648270|gb|ABK08911.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 583 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 38/467 (8%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++ D L AL+ + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL S + P+V+ A +L Q Sbjct: 79 NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G S+T + L P + + P++ SR++D + M +T Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPTLVARYLPRLASRDFDTLYQGAMF---------MT 182 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 E+ G+D+ I ++ +D ++ L+G KWF S+ +D ++LA+ +G + Sbjct: 183 EQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 R++ SI G+ N + LDV ++ + + L + L LG++ Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468 >gi|319796278|ref|YP_004157918.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315598741|gb|ADU39807.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 573 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 131/455 (28%), Positives = 211/455 (46%), Gaps = 41/455 (9%) Query: 33 GMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G N +++D+ L L+A + + + E LG + ELA A+ N P L Sbjct: 23 GQNLFTADTALHDLLALYLPDDLRAHMQPHFERLGG-LAGGQLDELAGTADRNPPTLKQR 81 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAAR 139 G KV HPA+ + R ++ + +I W P+V+ Sbjct: 82 TRTGLDEQKVVKHPAYVEMERLALREFGLAAISHRDETLGWKGKMPPLVKY-------VL 134 Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 YL Q E G S+T + L P + + P++ S ++D + M Sbjct: 135 TYLFVQAEFGLCCPVSMTDSLTRTLKKFGDPELVARFLPRLTSLDFDELAQGAMF----- 189 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 +TE+ G+DIAA + ++ +DG + ++G KWF S+P +D ++LA+ E Sbjct: 190 ----MTEQAAGSDIAATATMARREADGSWRITGDKWFCSNPDADFAMVLARAEDGAAGMK 245 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 V FL+PR LEDGS N RLK+K+G RS A+ E+ +L+G+ + D Sbjct: 246 GVSLFLLPRQLEDGSLNHYRIIRLKDKLGTRSMASGEIRLEGAVAYLVGEEGRGFVQMAD 305 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M L + + + MR ++AEA + A R G L P+M+R + + L A Sbjct: 306 MVNNSRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQRQLDKLRLPAEQART 365 Query: 372 LSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + A + + + E AYA RI+ P+ K+ C+ A V +AME GG GYIEE S Sbjct: 366 MVCQTALALARSDA-GEPDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEWS 424 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 R R++ SI G+ N + LDV+ +++ +L Sbjct: 425 DPRLVRDAHLGSIWEGTSNIVALDVIRAVKREGSL 459 >gi|167589972|ref|ZP_02382360.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 586 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 38/467 (8%) Query: 33 GMNAYSSD-SLLVALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N +++D L V L + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTADPDLGVLLRLHLGDARYAELEPQLHALGARV-SGELDEWAACADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDR-SFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ HPA+ AL R + + GL R P+V+ A +L Q Sbjct: 79 NRRGEPVQRIDKHPAYVALERVAYAELGLASLSHQRVPASPLVKY-------ALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G S+T + L P + + P + SR++D + M +T Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGEPELVARYLPMLASRDFDTLYQGAMF---------MT 182 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 E+ G+D+ I ++ + +D ++ L G KWF S+ +D ++LA+ +G + Sbjct: 183 EQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNADADLAMVLARPDGAPDGIKGL 242 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+P+ L DG+ N RLK+K+G+RS A+ E+ L+G++ + DM Sbjct: 243 ALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEGAHAHLIGEIGRGFHQMADMI 302 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L + + + MR ++ EA+H A R G LI+ P+M+R + + L AA + Sbjct: 303 NMSRLSNGVRAAGLMRRAMNEALHVAMHREAFGRKLIEMPLMQRQLMKMLLPTEAARTMF 362 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R+A +A + EAA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 363 IRIALLLQQADAGDAEAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 R++ SI G+ N + LDV ++ L + L + L LG + Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQRERAL-DALHAFLADRLGQA 468 >gi|167837216|ref|ZP_02464099.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis MSMB43] Length = 593 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 134/449 (29%), Positives = 217/449 (48%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N +++D AL+ A F + EL LG S LA A+ N P L Sbjct: 25 GINFFTNDPDCAALVRLHLGEARFRDL-EPELRTLGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + AL R + + GL S D + P+V+ A +L Sbjct: 83 RTRRGEALETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVGRFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQKIS--DG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + + DG I+ L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRDTSADGSAIWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADEGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|170733514|ref|YP_001765461.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169816756|gb|ACA91339.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 583 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 38/467 (8%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++ D L AL+ + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTVDPDLGALLKLHLGDAHYAELEPRLRALGARV-SGELDEWASRADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL S + P+V+ A +L Q Sbjct: 79 NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G S+T + L P + + P++ SR++D + M +T Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPRLASRDFDTLYQGAMF---------MT 182 Query: 204 EKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 E+ G+D+ I ++ +D ++ L+G KWF S+ +D ++LA+ +G + Sbjct: 183 EQAAGSDVGRIATRATCETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHRDAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 R++ SI G+ N + LDV ++ + + L + L LG++ Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468 >gi|221214813|ref|ZP_03587782.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1] gi|221165352|gb|EED97829.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1] Length = 583 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N +S D L AL+ A++ + + +L LG V S E A A+ + P L Sbjct: 20 GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL P + ++ A +L Q Sbjct: 78 RNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDAAPPL------VKYALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199 E G S+T + L T R D + P + SR++D + M Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252 +TE+ G+D+ I ++ + +D ++ L G KWF S+ +D ++LA+ +G Sbjct: 181 --MTEQAAGSDVGRIATRATRDTDAQGDTVWRLYGDKWFCSNADADLAMVLARPDGAPNG 238 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + Sbjct: 239 IHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLEGAHAYLIGEIGRGFHQM 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM + L + + + MR ++ EA+H A R G LID P+M+R + + L AA Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPTEAA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 S AR R++ SI G+ N + LDV + EQ L LG Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463 >gi|152988795|ref|YP_001346933.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150963953|gb|ABR85978.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 575 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 214/461 (46%), Gaps = 29/461 (6%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E + E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPVFERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE V HP + AL R + + ++ R P ++ +L Q E Sbjct: 80 RRGEDRQSVRKHPDYIALERIAYAELGLAAMSHRPDGP-----PPLVKYTLTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A S ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTCSVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 L EDGS N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 LREDGSRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L EA+ AR R G L++ P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALNEALFVARHRRAFGRYLVEMPLMQKQLLKLMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S AR R++ Sbjct: 365 PRADGGDGEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG 480 SI G+ N + LD+ + + L E L L L +SG Sbjct: 425 GSIWEGTSNIVALDIARAVSREQAL-EPLRRHLRGLLDASG 464 >gi|221198466|ref|ZP_03571512.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M] gi|221208585|ref|ZP_03581586.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221171576|gb|EEE04022.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221182398|gb|EEE14799.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M] Length = 583 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N +S D L AL+ A++ + + +L LG V S E A A+ + P L Sbjct: 20 GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL P + ++ A +L Q Sbjct: 78 RNRRGEAVQRIDKDPAYVALERVAYSELGLSALSHQPDAAPPL------VKYALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199 E G S+T + L T R D + P + SR++D + M Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252 +TE+ G+D+ I ++ + +D ++ L G KWF S+ +D ++LA+ +G Sbjct: 181 --MTEQAAGSDVGRIATRAARDTDAHGDTVWRLYGDKWFCSNADADLAMVLARPDGAPDG 238 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + Sbjct: 239 IHGLALFLLPKTLADGTRNHYRIVRLKDKLGSRSMASGEIVLDGAHAYLIGEIGRGFHQM 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM + L + + + MR ++ EA+H A R G LID P+M+R + + L AA Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPAEAA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 S AR R++ SI G+ N + LDV + EQ L LG Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463 >gi|218890181|ref|YP_002439045.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218770404|emb|CAW26169.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 575 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL + + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-QGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|254242291|ref|ZP_04935613.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192] gi|126195669|gb|EAZ59732.1| hypothetical protein PA2G_03032 [Pseudomonas aeruginosa 2192] Length = 575 Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 33/457 (7%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N Y+ D L L+ + P + E L E + + EL A A+ N P L Sbjct: 20 GLNLYTCDPALERLLEVYLPPALLAEWRPLLERLGARAGGELDVLALAADKNPPVLAPRT 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + HP + AL + + + S+ R P ++ A +L Q E Sbjct: 80 RRGEDLQSIRKHPDYVALEQVAYAELGLASMSHRPDGP-----PPLVKYALTHLFVQAEF 134 Query: 149 GHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G S+T + L P + + + P + SR++D + M +TE+ Sbjct: 135 GLCCPVSMTDSLTRTLRRFGAPELVERYLPSLASRDFDELFQGAM---------FMTEQA 185 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+A + ++ G + L G KWF S+P +D ++LA+ EG V FL+P+ Sbjct: 186 AGSDVARTRTVARE-EGGEWKLYGDKWFCSNPDADLAMVLARPEGAPEGMKGVTLFLLPK 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + EDG+ N RLK+K+G+RS A+ E+ +L+G++ + DM + L + Sbjct: 245 VREDGTRNAYRIVRLKDKLGSRSMASGEVRLEGASAYLIGEIGRGFQQMADMVNMSRLSN 304 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + + MR +L+EA+ AR R G LID P+M++ + + L A ++ ++A Sbjct: 305 GVRAAGLMRRALSEALFVARHRRAFGKHLIDMPLMQKQLLKMMLPTEQARSMFMQIATLL 364 Query: 381 DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A EA RI+ P+ K+ C+ A V +AME GG GYIEE S R R++ Sbjct: 365 PRADGGEVEAQKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHL 424 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 SI G+ N + LDV + + EQ L++ L Sbjct: 425 GSIWEGTSNIVALDVARAVSR-----EQALEPLQRHL 456 >gi|161524286|ref|YP_001579298.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189350958|ref|YP_001946586.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] gi|160341715|gb|ABX14801.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189334980|dbj|BAG44050.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] Length = 583 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 221/470 (47%), Gaps = 50/470 (10%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N +S D L AL+ A++ + + +L LG V S E A A+ + P L Sbjct: 20 GLNFFSVDPDLGALLRLHLGDAHY-TELEPQLRALGARV-SGELDEWASRADKHPPVLEH 77 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL P + ++ A +L Q Sbjct: 78 RNRRGEAVQRIDKDPAYVALERVAYSELGLAALSHQPDAAPPL------VKYALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD------WAPKIFSREYDPTNKAPMQKTSVAIG 199 E G S+T + L T R D + P + SR++D + M Sbjct: 132 AEFGLCCPVSMTDS----LTRTLRRFGDRELVARYLPMLASRDFDTLYQGAMF------- 180 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252 +TE+ G+D+ I ++ + +D ++ L G KWF S+ +D ++LA+ +G Sbjct: 181 --MTEQAAGSDVGRIATRAARDTDAHGNTVWRLYGDKWFCSNADADLAMVLARPDGAPDG 238 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + Sbjct: 239 IHGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIVLDGAHAYLIGEIGRGFHQM 298 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 DM + L + + + MR ++ EA+H A R G LID P+M+R + + L AA Sbjct: 299 ADMINMSRLSNGVRAAGLMRRAMNEALHVAAHREAFGRKLIDMPLMQRQLMKMLLPAEAA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE Sbjct: 359 RTMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEW 418 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 S AR R++ SI G+ N + LDV + EQ L LG Sbjct: 419 SDARLVRDAHLGSIWEGTSNIVALDVARAARR-----EQALDALRTFLGD 463 >gi|172061116|ref|YP_001808768.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993633|gb|ACB64552.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 584 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 138/485 (28%), Positives = 228/485 (47%), Gaps = 39/485 (8%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66 MN + D+ A + P G+N +++D L AL+ A + + +L LG V Sbjct: 1 MNDTARTPDA-GASDNIPDSRGINFFTADPDLGALLKLHLGAAQYARLEPQLHALGARV- 58 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 S E A A+ + P L GE +++ PA+ AL R + L + + Sbjct: 59 SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVAL-ERVAYSELGLAALSHQPDA 117 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184 V A ++ A +L Q E G S+T + L P + + + P + SR++D Sbjct: 118 V----APLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDFD 173 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG----QKISDGIYCLSGHKWFLSSPMS 240 + M +TE+ G+D+ I ++ + ++ L G KWF S+ + Sbjct: 174 TLFQGAMF---------MTEQAAGSDVGRIATRAVHETHASGEAVWRLYGDKWFCSNADA 224 Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D ++LA+ +G + FL+P+ L DG+ N RLK+K+G+RS A+ E+ Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNHYRIVRLKDKLGSRSMASGEIALEGA 284 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 +L+G++ + DM + L + + + MR +L E++H A RR G LI+ P+ Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAARRTAFGRTLIEMPL 344 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413 M+R + + L AA A+ ++A +A + E+AA RI+ P+ K+ C+ A V Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTG 404 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 +AME GG GYIEE S AR R++ SI G+ N + LDV ++ EQ L Sbjct: 405 DAMEVRGGIGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQR-----EQALDALR 459 Query: 474 QDLGS 478 LG Sbjct: 460 TFLGD 464 >gi|304391704|ref|ZP_07373646.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] gi|303295933|gb|EFL90291.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] Length = 484 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 155/529 (29%), Positives = 236/529 (44%), Gaps = 67/529 (12%) Query: 35 NAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERW 94 NA+S +++L P V ++L L Y + A+ELAR+ P+L Sbjct: 10 NAFSRNTVLNGAANGLPDPVLEDLAELAIYTEARQAKELARLTTLFQPRLDGDAAA---- 65 Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP 154 +FHPA+HAL RR + GL S+W S E V H RA RL A LE HL Sbjct: 66 --FDFHPAFHALARRGVTAGLAGSVW--SNEEVEAGARHLTRALRLATAATLEPTHLTLL 121 Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S T ASM ALM WA + SR+YD + +K + + L + D Sbjct: 122 SHTHASMAALMNDSESLGRWASGLMSRQYDTGARLSAEKQGLTVALAV-------DAVMT 174 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNG 269 +G+ G + ++G L +P +D ++ Q CF++ R + +G Sbjct: 175 AEKGE----GGWTITGRGLPLPAPAADLILVRGQTTANGPPQAETCFVIDRYA--AASSG 228 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 L RL + S+ +F+N +G + ++ L+ LD A++ M+ Sbjct: 229 L---RL-----SISDGAAHCDFANVPAQPIGRPGDGADVMAELTTLLRLDRAVIEAGTMK 280 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +++ A A RA+AD ALD+AAA AL+ RLA SFD A E Sbjct: 281 AAISRAAETAH-----------NDAQLRALADAALDVAAAHALALRLAASFDRAADDPVE 329 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A YAR+MAP+ +W ++ V+A EC G E + SPA A Sbjct: 330 AGYARLMAPVAAFWSGRLLAPVLA---EC----GLTTEPA------RSPA---------A 367 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 + DV + +G +++ + QDLG SG+ +LR S + D G R E++A Sbjct: 368 LCDDVAQIARRGPRTVDRVVDRVAQDLGESGEGTANVLRSSREMAVADPGSIRMFMEQLA 427 Query: 510 LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSL 558 A++AA L R +A+ F E R S++ ML R +A I+++L Sbjct: 428 FAAAAAELQRIAPGILAEAFTETRLGRPWRSSYGMLDARHDAGDILEAL 476 >gi|309781942|ref|ZP_07676673.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] gi|308919286|gb|EFP64952.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] Length = 604 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 123/420 (29%), Positives = 200/420 (47%), Gaps = 28/420 (6%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 + +L+ LG+ V S A A++N PQL GE + HP + AL R + Sbjct: 67 LEPQLKSLGQRV-SDELDAWAISADHNPPQLRHRTRRGEALQTIVKHPDYVALERVA--- 122 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVH 171 + + S V ++ A YL Q E G S+T + L P + Sbjct: 123 --YAELGLASMSHVGNAPPPLVKYALTYLFVQAEFGLCCPVSMTDSLTRTLRKFGDPALL 180 Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGI--YC 227 + P + SR++D + M +TE+ G+D+A I ++ + DG + Sbjct: 181 ARYLPMLASRDFDVLYQGAM---------FMTEQAAGSDVARIATRAALETAPDGTQTWR 231 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 L G KWF S+ +D ++LA+ +G + FL+P+ L DGS N RLK+K+G Sbjct: 232 LYGDKWFCSNADADLAMVLARPDGAPSGINGLALFLLPKTLRDGSRNHYRIVRLKDKLGT 291 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 RS A+ E+ +L+G++ + DM + L + + + MR + EA+H AR Sbjct: 292 RSMASGEIALEGATAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRATTEALHIARN 351 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPIT 400 R G LID P+M+R + + L A ++ ++A A + +AA RI+ P+ Sbjct: 352 REAFGRKLIDMPLMQRQLLKMLLPTEQARSMFMQIAQLLPLADAGDAQAAKCVRILTPLI 411 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K+ C+ A V +AME GG+GYIEE S AR R++ SI G+ N + LD+ +++ Sbjct: 412 KFRACRDARRVTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAVKR 471 >gi|171317918|ref|ZP_02907094.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171096925|gb|EDT41797.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 584 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 138/486 (28%), Positives = 233/486 (47%), Gaps = 35/486 (7%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVL 66 MN + D+ + N P G+N +++D L AL+ A + + +L LG V Sbjct: 1 MNDTTRTPDAGASGNIPD-SRGINFFTADPDLGALLKLHLGAAQYTRLEPQLHALGARV- 58 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 S E A A+ + P L GE +++ PA+ AL R + L + E Sbjct: 59 SGELDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVAL-ERVAYAELGLAALSHQPEA 117 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYD 184 V A ++ A +L Q E G S+T + L P + + + P + SR++D Sbjct: 118 V----APLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGEPALVEHYLPMLASRDFD 173 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS----DGIYCLSGHKWFLSSPMS 240 + M +TE+ G+D+ I ++ + + ++ L G KWF S+ + Sbjct: 174 TLFQGAM---------FMTEQAAGSDVGRIATRAVRETHAQGGAVWRLYGDKWFCSNADA 224 Query: 241 DAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D ++LA+ +G + FL+P+ L DG+ N RLK+K+G+RS A+ E+ Sbjct: 225 DLAMVLARPDGAPDGIKGLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGA 284 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 +L+G++ + DM + L + + + MR +L E++H A R G LI+ P+ Sbjct: 285 QAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRALNESLHVAAHRTAFGRTLIEMPL 344 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIA 413 M+R + + L AA A+ ++A +A + E+AA RI+ P+ K+ C+ A V Sbjct: 345 MQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTG 404 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 +AME GG+GYIEE S AR R++ SI G+ N + LDV ++ L + L + L Sbjct: 405 DAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREQAL-DALRTFLA 463 Query: 474 QDLGSS 479 LG++ Sbjct: 464 DRLGAA 469 >gi|325525345|gb|EGD03187.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49] Length = 446 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 128/441 (29%), Positives = 216/441 (48%), Gaps = 35/441 (7%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTAQEL---ARMANYNTPQLHAYG 88 G+N +++D L AL+ + + ELE + + + EL A A+ + P L Sbjct: 20 GVNFFTADPDLGALLKLHLGDAQYAELEPQLRALGARVSDELDAWASRADKHPPVLEHRN 79 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS--FEPVVRKQAHKIRAARLYLMAQL 146 GE +++ PA+ AL R + + ++ RS P+V+ A +L Q Sbjct: 80 RRGEAVQRIDKDPAYVALERVAYSELGLAALSHRSDAVPPLVKY-------ALTFLFVQA 132 Query: 147 EAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 E G S+T + L P + + PK+ SR++D + M +TE Sbjct: 133 EFGLCCPVSMTDSLTRTLRRFGDPDLVAHYLPKLASRDFDTLYQGAMF---------MTE 183 Query: 205 KRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254 + G+D+ I ++ + +D ++ L G KWF S+ +D ++LA+ +G + Sbjct: 184 QAAGSDVGRIATRAARDTDAQGNAVWRLYGDKWFCSNADADLAMVLARPDGAPEGIKGLA 243 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 244 LFLLPKTLPDGTRNRYRIIRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMIN 303 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ Sbjct: 304 MSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLIKMLLPAEAARAMFM 363 Query: 375 RLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++A +A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 364 QIALLLPQADAGDLQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDARL 423 Query: 434 YRESPANSILLGSGNAMVLDV 454 R++ SI G+ N + LDV Sbjct: 424 VRDAHLGSIWEGTSNIVALDV 444 >gi|291614632|ref|YP_003524789.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus ES-1] gi|291584744|gb|ADE12402.1| acyl-CoA dehydrogenase domain protein [Sideroxydans lithotrophicus ES-1] Length = 570 Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 194/414 (46%), Gaps = 44/414 (10%) Query: 70 AQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 A EL+ A+ P L + G R D+V HP +H L R + G+ +D +F R Sbjct: 57 ATELSARADKQGPTLATHDARGMRRDRVVQHPDYHELERLAYGRGIVGIKYDAAFLAQHR 116 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 + H Y AQ E G + P D ++ R T + Sbjct: 117 EVRHLAGFGAGYYFAQSEIG---------------LYCPICMTDGVGRVLERRPAGT-QT 160 Query: 190 PMQKTSVAI------------GLGLTEKRGGTDIAA----ITSQGQKISDGIYCLSGHKW 233 P+ +T++A + LTE++GG+D+ A T QG++ + L+G KW Sbjct: 161 PLYETTIAHLAASDLENLWQGAMFLTERQGGSDVGANTVTATRQGRR-----WLLNGDKW 215 Query: 234 FLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 F S+ +DA + LA++ G +G FLV R G+ + QRLK+K+G RS AT Sbjct: 216 FCSNVAADAILALARMPGGAPGTKGLGLFLVLRQEPAGNSGTIRIQRLKDKLGVRSMATG 275 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 E+ F NT L+ N + +M L L +A+ SV+GMR +L EA+ Y R+ G Sbjct: 276 EVTFENTVAHLVAGENEGFKQMAEMLNLSRLYNAVASVAGMRRALLEALKYGAGRNAFGH 335 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCK 406 L + P+ + A+AD+ + L F + D + + ++A RI P+ K K Sbjct: 336 RLDELPLWRAAMADLVAEHLGIFTLVFETVRALDRSDNGDDQARKLLRIAIPMAKALSGK 395 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +A ++EAME IGG+ YIEE + R R+ I G+ + + LD L ++K Sbjct: 396 LAVFAVSEAMEAIGGNAYIEESILPRLLRDCQVLPIWEGTTHILTLDALRAIQK 449 >gi|323166668|gb|EFZ52426.1| aidB domain protein [Shigella sonnei 53G] Length = 256 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 131/245 (53%), Gaps = 8/245 (3%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L + + + L +G+ + + + EL Sbjct: 1 MHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQVLCTNRVHNLAWEED----ARSGAF 114 Query: 134 KIRAARLYLMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ 192 RAAR L AQ+EAG L ++T +A+ + L P +DW + S YD Q Sbjct: 115 VARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPLLSDRYDSHLLPGGQ 174 Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 K + IG+G+TEK+GG+D+ + T++ +++ DG Y L GHKWF S P SDA ++LAQ G Sbjct: 175 KRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGG 234 Query: 253 VGCFL 257 + CFL Sbjct: 235 LSCFL 239 >gi|271967416|ref|YP_003341612.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] gi|270510591|gb|ACZ88869.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] Length = 584 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 137/463 (29%), Positives = 212/463 (45%), Gaps = 58/463 (12%) Query: 33 GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N Y SD L L+ A LE G ++ E A + N P+L Y Sbjct: 33 GLNWYGSDPTLRFLMHRHLGAGALEWAAPHLERAGA-LMGGPILEHAEETDRNPPRLERY 91 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR-----SFEPVVRKQAHKIRAARLYL 142 G ++ P++ A R + + R +PV A YL Sbjct: 92 DRWGHDVSRIVMPPSFEAARRELVAGSFTRPEFAREAKAAGADPVTMGLAWN------YL 145 Query: 143 MAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + Q + G + T MV LM P+ K+ +IF+ A M Sbjct: 146 LYQADIG-MGCALGTGGDMVVLMAEAFAPQDVKERVREIFADGMFSGEAAQM-------- 196 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 TE+ GG+D+AA+ S D + L+G KWF S+ AF++LA+ EG V Sbjct: 197 --FTERTGGSDLAALESTATPAGDA-WRLNGLKWFASNANGSAFVVLAKAEGGPDGSRGV 253 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLV R DG NG+ +RLK+K+G RS A+ E+EF++ FLL + TG + + Sbjct: 254 APFLVLRERRDGGHNGIRVRRLKDKLGTRSVASAEIEFTDAEAFLLAPESTGTGDGKGLG 313 Query: 314 ILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ L + A M +S R +L E++ YAR R G LIDQP+M+R +A++ +++ Sbjct: 314 RMMELTNGARLGIATMGLSCARRALVESLCYARSREAFGAALIDQPLMRRKLAELIVEVE 373 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA AL FD +R R+ + K ++ ++A+E GG+GYIE+ Sbjct: 374 AAQAL------VFDGFHTR------LRLGPALIKLRAARLGVTAASDAIEVHGGNGYIEQ 421 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQL 468 +AR R++ N I G N + LDV ++K +L F++L Sbjct: 422 WPVARILRDAQVNPIWEGGDNILCLDVRRAVKKDQHLPFFDRL 464 >gi|206560596|ref|YP_002231361.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|198036638|emb|CAR52536.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 583 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 135/467 (28%), Positives = 225/467 (48%), Gaps = 38/467 (8%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAY 87 G+N ++ D AL+ + + ELE LG V S E A A+ + P L Sbjct: 20 GINFFTVDPDFGALLKLHLGDARYAELEPRLHALGARV-SGELDEWASRADKHPPVLEHR 78 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GL-HCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 GE +++ PA+ AL R + + GL S + P+V+ A +L Q Sbjct: 79 NRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKY-------ALTFLFVQ 131 Query: 146 LEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G S+T + L P + + P + SR++D + M +T Sbjct: 132 AEFGLCCPVSMTDSLTRTLRRFGDPALVARYLPMLASRDFDTLYQGAMF---------MT 182 Query: 204 EKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 E+ G+D+ I ++ +D ++ L+G KWF S+ +D ++LA+ +G + Sbjct: 183 EQAAGSDVGRIATRATCETDVHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIKGL 242 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+P+ L DG+ N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 243 ALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMI 302 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L + + + MR +L EA+H A R G LI+ P+M+R + + L AA A+ Sbjct: 303 NMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMF 362 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++A +A + E+AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 363 MQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSDAR 422 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 R++ SI G+ N + LDV ++ + + L + L LG++ Sbjct: 423 LVRDAHLGSIWEGTSNIVALDVARAAQR-EHALDALRTFLGDRLGAA 468 >gi|188591922|ref|YP_001796520.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] gi|170938296|emb|CAP63281.1| Acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 600 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 122/413 (29%), Positives = 192/413 (46%), Gaps = 41/413 (9%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRS 123 ELA +A+ N P+L G +++ HPA+ + R + + GL + WD+ Sbjct: 73 ELAGVADRNPPELSYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRSGVLGWDQP 132 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181 P + A YL Q E G S+T + L P + + P + ++ Sbjct: 133 MPPAAKY-------ALTYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRFLPNLTTQ 185 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239 +D + M +TE+ G+D+AA ++ + ++G + L G KWF S+P Sbjct: 186 VFDDLYQGAMF---------MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPD 236 Query: 240 SDAFIMLAQVEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++LA+VE G FL+PR L DGS N RLK+K+G RS A+ E+ Sbjct: 237 AALAMVLARVEDEAGNAVPGHKGVSLFLLPRKLADGSANHYRIIRLKDKLGTRSMASGEI 296 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 +L+G+ + DM L + + + MR +L E + AR R G L Sbjct: 297 RLEGAHAWLVGEPGRGFVQMADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRL 356 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKM 407 D P+M+R + + L A + F+ A + A + E AYA RI+ P+ K+ C+ Sbjct: 357 QDMPLMRRQLLKLTLPTEQARTMVFQTAEALRRADA-GEADAYALMRILTPLIKFRACRD 415 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V +AME GG GYIEE S R R++ SI G+ N + LDVL + + Sbjct: 416 ARKVTGDAMEIRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAVRR 468 >gi|213513810|ref|NP_001133849.1| AIDB protein [Salmo salar] gi|209155562|gb|ACI34013.1| aidB [Salmo salar] Length = 628 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 136/471 (28%), Positives = 209/471 (44%), Gaps = 54/471 (11%) Query: 35 NAYSSDSLLVA-LIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92 N + D+LL L + PS V+ +L + GE ++ R P+L Y P G Sbjct: 69 NPFLEDALLQGYLRRHLPSEAVYSDLHVFGERLVR-EVDGWGRECEVTPPRLVTYDPWGC 127 Query: 93 RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 R D++ PAW + S +GL ++RS+ +R+Y M +L +L Sbjct: 128 RVDRIVTSPAWQRMKDLSAQEGLVAIGYERSYG----------EWSRVYQMCKL---YLY 174 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKI-------------FSREYDPTNKAPMQKTSVAIG 199 SPS L T P D A K+ FSR T++ P + G Sbjct: 175 SPSS------GLYTCPLAMTDGAAKVIQSLGVSWPVADAFSRL---TSRNPEHFWTS--G 223 Query: 200 LGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGR--- 252 +TE+RGG+D+ T SDG Y LSG KWF S+ +D + LA+V +G+ Sbjct: 224 QWMTERRGGSDVGNGTETIALPQSDGTYRLSGFKWFTSATDADMTLTLARVTDVDGQTTS 283 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + F E G G+ QRLK+K+G R T EL L + Sbjct: 284 GSRGLSMFYAAVRDEQGMVQGIEVQRLKDKLGTRQMPTAELLLDGLPAHRLSEEGRGVAC 343 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M + + +++ +V+GMR L A YA RR G +L D P+ + +A + ++ Sbjct: 344 IANMLTVSRIHNSVSAVAGMRRVLQLARDYATRRSAFGKLLRDHPLHMQTLARMEVETRG 403 Query: 369 ATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A L RL + + E R++ P+ K + K A AVI+E +E GG GYI Sbjct: 404 AFLLVMEVCRLIGREETGHASQLETHLLRLLTPVAKLYTGKQAIAVISEGLESFGGQGYI 463 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 E+ + R++ SI G+ N + LDVL + + + L Q + T Q L Sbjct: 464 EDTGLPAMLRDAQVLSIWEGTTNVLSLDVLRCVSRSSGLVLQAYFTHTQSL 514 >gi|167619358|ref|ZP_02387989.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis Bt4] Length = 593 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F + EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + AL R + + GL S D + P+V+ A +L Sbjct: 83 RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++ ++ M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + + G + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRETSADGAGTWRLFGDKWFCSNADADLAMVLARPEGAPDGVNG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + AEA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|167825010|ref|ZP_02456481.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9] gi|226195529|ref|ZP_03791117.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|225932489|gb|EEH28488.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] Length = 597 Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|126455351|ref|YP_001066955.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1106a] gi|242315972|ref|ZP_04814988.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|126228993|gb|ABN92533.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106a] gi|242139211|gb|EES25613.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] Length = 595 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|254191357|ref|ZP_04897861.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|157939029|gb|EDO94699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] Length = 595 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 23 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 80 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 81 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 133 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 184 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 185 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 244 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 304 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 364 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 365 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453 >gi|76809492|ref|YP_334166.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1710b] gi|167911738|ref|ZP_02498829.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 112] gi|254259404|ref|ZP_04950458.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] gi|254296987|ref|ZP_04964440.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|76578945|gb|ABA48420.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710b] gi|157807916|gb|EDO85086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|254218093|gb|EET07477.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] Length = 597 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|254209407|ref|ZP_04915753.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] gi|147750180|gb|EDK57251.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] Length = 595 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 23 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 80 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 81 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 133 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 134 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 184 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 185 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 244 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 245 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 304 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 305 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 364 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 365 FMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 424 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 425 RVLRDAHLGSIWEGTSNIVALDVARAVKR 453 >gi|53724187|ref|YP_103373.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei ATCC 23344] gi|67639362|ref|ZP_00438227.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8 horse 4] gi|124384158|ref|YP_001028996.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10229] gi|126450449|ref|YP_001081083.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10247] gi|254178355|ref|ZP_04885010.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|254200330|ref|ZP_04906696.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|254357923|ref|ZP_04974196.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei 2002721280] gi|52427610|gb|AAU48203.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 23344] gi|124292178|gb|ABN01447.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10229] gi|126243319|gb|ABO06412.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10247] gi|147749926|gb|EDK57000.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|148027050|gb|EDK85071.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei 2002721280] gi|160699394|gb|EDP89364.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|238519897|gb|EEP83363.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8 horse 4] Length = 597 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADTGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|167919739|ref|ZP_02506830.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei BCC215] Length = 597 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|134278016|ref|ZP_01764731.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|167816609|ref|ZP_02448289.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91] gi|134251666|gb|EBA51745.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] Length = 597 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|213586298|ref|ZP_03368124.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 176 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 1/175 (0%) Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 L GHKWF S P SDA ++LAQ +G + CF VPR L DG N + +RLK+K+GNRSNA+ Sbjct: 2 LVGHKWFFSVPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASA 61 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 E+EF +T G+ LG+ + M + LD A+ S MR + + AI++A +R G Sbjct: 62 EVEFQDTVGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGK 121 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 LI+QP+M++ ++ +AL + TAL FRLA ++ E + ++EA +AR+ P K+ Sbjct: 122 PLIEQPLMRQTLSRMALCLEGQTALLFRLARAW-EQRREAKEALWARLFTPAAKF 175 >gi|167739400|ref|ZP_02412174.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] Length = 470 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|237813068|ref|YP_002897519.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei MSHR346] gi|237505300|gb|ACQ97618.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei MSHR346] Length = 595 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|53719939|ref|YP_108925.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|52210353|emb|CAH36332.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] Length = 597 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|254184327|ref|ZP_04890917.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|184214858|gb|EDU11901.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] Length = 597 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|254503978|ref|ZP_05116129.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222440049|gb|EEE46728.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 601 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 140/502 (27%), Positives = 223/502 (44%), Gaps = 46/502 (9%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---- 128 L+R A+ + P LH P G D +EFHPA+ + + + D ++ + +P V Sbjct: 75 LSRTADRHVPVLHHRDPRGRFEDWIEFHPAYKRMEQITFCD---FAMAGMTGKPGVFGWP 131 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TN 187 H ++ YL+ Q E G L S+T T + K + R YD + Sbjct: 132 EPMPHTVKFLFQYLLGQSEFGQLCPISMTET------TAAMIKKFGGEALIERFYDRLIS 185 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 + P +T ++ G +TE+ GG+D++ + + + DG + L G KWF S+ +D ++LA Sbjct: 186 QDP--ETRMSGGQFMTERHGGSDVSQLAVEA-RFDDGEWRLYGEKWFCSAADADVVLVLA 242 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + G + F +PR LEDGS N RLK+K+G S A+ E+ F + LGD Sbjct: 243 RPRGAPAGNKGLAVFALPRRLEDGSRNAYRVVRLKDKLGTLSMASGEVVFEGAVAYPLGD 302 Query: 302 LNVSTGPVEDMKI----LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + P M + L L + S MR L EA+ AR R G +I +P+++R Sbjct: 303 VGAKENPGLKMMMNQVSLSRLSHGARAASMMRRCLNEAMTVARSRKAFGETIIGKPLLRR 362 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAM 416 + + + A +++ L A + A ARI+ P KY + V AM Sbjct: 363 QLMKLLVPTEQALSMTLYLGTVLTAAANGDTHAERVARILTPAHKYRTARDNIRVATGAM 422 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 E GG+GYIE+ AR R++ + G+ N LD+ T + L S L + + Sbjct: 423 EVRGGNGYIEDFVNARLVRDAHVGLLWEGTSNINALDITTRAIGRTEAHKDLKSALLEQI 482 Query: 477 -------GSSGKKVITILRDSISLCKE-----DKGLARFLTEKIALASSAAALYRAGMND 524 GS + + L S+ L +E ++ LAR + AS+A L G Sbjct: 483 EDCPGLPGSFASALKSSLIKSLDLAEEIARRGEESLARQAASAVYHASTAVLLACEGARL 542 Query: 525 IAD------VFLENRFLDNCHS 540 AD + L +D+C S Sbjct: 543 GADGGDARRLLLARMVIDHCLS 564 >gi|167846523|ref|ZP_02472031.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] Length = 597 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|254195904|ref|ZP_04902330.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|169652649|gb|EDS85342.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] Length = 597 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|167903488|ref|ZP_02490693.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei NCTC 13177] Length = 601 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|217420505|ref|ZP_03452010.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|217395917|gb|EEC35934.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] Length = 597 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|126441421|ref|YP_001059673.1| Acyl-CoA dehydrogenases [Burkholderia pseudomallei 668] gi|126220914|gb|ABN84420.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] Length = 599 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLRP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|326930039|ref|XP_003211160.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Meleagris gallopavo] Length = 638 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 142/523 (27%), Positives = 234/523 (44%), Gaps = 43/523 (8%) Query: 4 REIYRRLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFP----SVVHKEL 58 +++ L M + +++LF P N Y D+LL + L A+ P V +EL Sbjct: 45 KQVGADLEMPVARREAETLFQERPEP----GNQYLEDALLRSYLEAHLPPKVLEEVSQEL 100 Query: 59 ELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118 E G +L+ + L N P Y G+R D + AW + + +GL Sbjct: 101 EGFGNRLLT-KIRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLVAE 159 Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAP 176 ++R + R H+ A +LYL + G ++T +A ++ + P K+ Sbjct: 160 AYERRYSNWSR--VHQ--AVKLYLFSTASGGFNCPLAMTDGAAKVIESLGVPASLKNAFD 215 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFL 235 + SR DP + G +TE+RGG+D+A T +K DG Y L G KWF Sbjct: 216 HLTSR--DP-------RKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYHLYGFKWFT 266 Query: 236 SSPMSDAFIMLAQVE----------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 S+ SD + LA++E G + F + E+ NG+ QRLK K+G R A Sbjct: 267 SAADSDMALTLARIEDAEGHVKQGSGGLSLFFLRVRDEEEKLNGIQVQRLKAKLGTRQMA 326 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 T EL + L+ + +M + + + I +V+ MR ++ + YA +R Sbjct: 327 TAELWLNGAKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSRQYALKRVAF 386 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKY 402 G +L D P+ + IA + + A L +A A++ ++ R++ P+ K Sbjct: 387 GKLLKDHPLHMQTIARMEVQTRGAFLLLMEMARLLGLAETNMASEQDQLLLRLLVPVAKL 446 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + K A A+ EAME GG GY+E+ + R++ SI G+ N + LDVL L K Sbjct: 447 YTGKQASAIAIEAMESFGGQGYMEDTGLPVIVRDTLVLSIWEGTTNVLSLDVLRSLAKSQ 506 Query: 463 -NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG-LARF 503 + FST++ LG + L+ ++ ++ G LARF Sbjct: 507 GQVMAVFFSTVQNKLGLASSSA--ELQPAVQFVQDAAGRLARF 547 >gi|239817931|ref|YP_002946841.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239804508|gb|ACS21575.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 574 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 121/406 (29%), Positives = 190/406 (46%), Gaps = 35/406 (8%) Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GL-------HCSIWDRSFEPVV 128 A+ N P L G KV HPA+ + R ++ + GL W P+V Sbjct: 71 ADRNPPTLKQRTRTGLDEQKVVKHPAYVEMERLALSEFGLAAMSHRDQTLGWKGRMPPLV 130 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186 + YL Q E G S+T + L P + + P++ S ++D Sbjct: 131 KY-------VLTYLFVQAEFGLCCPVSMTDSLTRTLKKFGGPELVARFLPRLTSLDFDEL 183 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML 246 + M +TE+ G+DIAA + ++ +DG + LSG KWF S+P +D ++L Sbjct: 184 AQGAM---------FMTEQAAGSDIAATATMARQEADGSWRLSGDKWFCSNPDADFAMVL 234 Query: 247 AQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 A+ + V FL+PR LEDGS N RLK+K+G RS A+ E+ +L+G Sbjct: 235 ARADNGPAGMKGVSLFLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLEGAVAYLVG 294 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + DM L + + + MR ++AEA + A R G L P+M+R + Sbjct: 295 EEGRGFVQMADMVNNSRLSNGVRAAGLMRRAVAEAEYIAAERRAFGRTLDQMPLMQRQLD 354 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMEC 418 + L A + + A + + + E AYA RI+ P+ K+ C+ A V +AME Sbjct: 355 KLRLPAEQARTMVCQTALALARSDA-GEPDAYALLRILTPLIKFRACRDARKVTGDAMEV 413 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 GG GYIEE S R R++ SI G+ N + LDV+ +++ +L Sbjct: 414 RGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVIRAVKREGSL 459 >gi|215425048|ref|ZP_03422967.1| acyl-CoA dehydrogenase FadE35 [Mycobacterium tuberculosis T92] Length = 370 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 141/255 (55%), Gaps = 19/255 (7%) Query: 233 WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 WF S+ +AF++LA+ EG V FLV R DGS NG+ +RLK+K+G RS A+ Sbjct: 1 WFASNCAGEAFVVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVAS 60 Query: 287 VELEFSNTFGFLL-GDLNVSTGPVE--------DMKILIYLDSAIMSVSGMRVSLAEAIH 337 E+EF + FLL G+ + GP + ++ + L +A ++ R +L E++ Sbjct: 61 GEIEFVDAEAFLLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLC 120 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA +R GG LID+P+M+R +A++ +D+ AA A+ F + F A R RI Sbjct: 121 YAGQRRAFGGALIDKPLMRRKLAEMVVDVEAALAMVF---DGFGAANHRQPRCLPQRIAV 177 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 P+TK C++ V ++A+E GG+GYIE +AR R++ N+I G N + LDV Sbjct: 178 PVTKLKTCRLGITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRG 237 Query: 458 LEKGTNLFEQLFSTL 472 +E+ T E L + L Sbjct: 238 IEQ-TRAHETLLARL 251 >gi|313117232|ref|YP_004044215.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312294123|gb|ADQ68554.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 586 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 130/455 (28%), Positives = 213/455 (46%), Gaps = 31/455 (6%) Query: 65 VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRS 123 ++ T + A +A+ N P+L + GE +++E HPA H R +++ G+ +++ Sbjct: 51 MIGHTVADNADVADDNPPKLRTHNKHGEVINEIEHHPA-HIENERLVYEAGVIADVFE-- 107 Query: 124 FEPVVRKQ--AHKIRAARLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIF 179 P R+ + + YLM + L P + A++V + + + Sbjct: 108 -SPPGREDPVSFPYHFGQFYLMEYASSVGLSCPGAMTGGAALVLDKFDDGSLQRFYDGLT 166 Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 +R+YD M LTEK+GGTD+ A + DG Y L G KWF S+ Sbjct: 167 ARDYDDLMTGAMF---------LTEKQGGTDVGANEVTAEPQEDGTYELYGEKWFCSNID 217 Query: 240 SDAFIMLAQ-------VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 S+A ++LA+ EG + FLV DG P ++RLK+K+G + T E+ F Sbjct: 218 SEAALVLARRPAAPDGTEG-LSLFLVSTHDRDGEPTNYRFRRLKDKLGTVTVPTGEVVFE 276 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 +L+G+ + +M L +AI S M SL E+ +A R V G L + Sbjct: 277 GAEAYLIGESENGFRQMSEMLNAERLYNAIGSCGSMGRSLLESKVHAANREVFGKRLDEH 336 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYWCCKMAPA 410 P+M+R +A++A D AA A +F + + +++ A+ RI+ P KY +MA Sbjct: 337 PLMRRDLAEMATDHEAALAFTFEAVEALHRRERENDDEAHRLMRILVPTAKYRTARMAVD 396 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 + AME GG+GY+EE R R + I G+ N M LDVL +++ E L + Sbjct: 397 TASYAMEIKGGNGYVEEFVHPRLLRNAQVLPIWEGASNVMALDVLRSMDREA-AHEPLLT 455 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 +++ L S V+ L + + E GLA +T Sbjct: 456 LIDERLDSVTHPVLERL--AAEIRDERDGLANAIT 488 >gi|167581276|ref|ZP_02374150.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis TXDOH] Length = 593 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 130/447 (29%), Positives = 216/447 (48%), Gaps = 35/447 (7%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F + EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 GE + ++ HP + AL R + + ++ R P ++ A +L Q Sbjct: 83 RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRGDAP-----PPLVKYALTFLFVQA 137 Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 E G S+T + L + + + + P++ SR++ ++ M +TE Sbjct: 138 EFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------MTE 188 Query: 205 KRGGTDIAAITSQG--QKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254 + G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG + Sbjct: 189 QAAGSDVGRIATRAVRETSADGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVNGLA 248 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 249 LFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADMIN 308 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L + + + MR + AEA+H AR R G LID P+M+R + + + A +L Sbjct: 309 MSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFM 368 Query: 375 RLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++A +A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 369 QIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDARV 428 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 R++ SI G+ N + LDV +++ Sbjct: 429 LRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|169858313|ref|XP_001835802.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis cinerea okayama7#130] gi|116503140|gb|EAU86035.1| acyl-CoA dehydrogenase domain-containing protein [Coprinopsis cinerea okayama7#130] Length = 597 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 127/429 (29%), Positives = 196/429 (45%), Gaps = 42/429 (9%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 V +LE LG+ VL+ + LA A + P L Y G R D +E W L + + Sbjct: 40 VQPDLERLGKEVLTVI-RPLADSAAVSNPTLTQYDQWGRRIDNLETSEGWRKLKAIAQQE 98 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMA--QLEAGHLMSPSVTSASMVALMTTPRVH 171 GL ++R++ R A++ LM E +S + +A ++ L+ P + Sbjct: 99 GLPGIFYERTYGEHSRIYGF----AKMLLMVGDTQEVFCPLSMTDGTARVIELIGNPALK 154 Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-----IY 226 +D P++ SR DP+ + G +TE+ GG+D++ + +S Y Sbjct: 155 RDVLPRLISR--DPSQ-------AFTAGQWMTERPGGSDVSLTETTATDLSQTHSYGPKY 205 Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLL------EDGSP----NGL 270 L+G KWF S+ S+ + LA+ G G FL+P L D P N + Sbjct: 206 SLNGIKWFSSATDSEVSVALARTGSISAGSRGLSLFLIPLRLPLFPAPSDSKPSSTSNNI 265 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 RLKNKIG T EL NT G+L+ LN + + + L SAI SV +R Sbjct: 266 FIHRLKNKIGTHVLPTAELSLQNTEGYLISPLNQGVKHITPVLNITRLWSAITSVGHLRK 325 Query: 331 SLAEAIHYARRRHVSGG--ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK---S 385 L+ A YAR R + G +L D P+ +A I L A T + F +A + + + Sbjct: 326 CLSIATSYARVRAIKSGTQLLQDNPLHVAQLAQINLLYRALTHMCFSVAGLMGKVECGVA 385 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EEA R++ P+ K +C + A + EAM +GG+GY+EE I R R+ I G Sbjct: 386 SGEEAKRLRMLTPVVKAFCAEKASVGMEEAMSALGGAGYMEENGIGRAIRDGLVEKIWEG 445 Query: 446 SGNAMVLDV 454 + + LD+ Sbjct: 446 TVVVLALDL 454 >gi|83719195|ref|YP_442364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|257138566|ref|ZP_05586828.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|83653020|gb|ABC37083.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis E264] Length = 593 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F + EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARF-RTLEPELRALGLRA-SDELDRLASRADKNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + AL R + + GL S D + P+V+ A +L Sbjct: 83 RTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++ ++ M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLHQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + + + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGAPDGVNG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + AEA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +AA RI+ P+ K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|116694047|ref|YP_728258.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113528546|emb|CAJ94893.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 598 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 120/413 (29%), Positives = 191/413 (46%), Gaps = 41/413 (9%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRS 123 ELA +A+ + P+L G +++ HPA+ + R + + GL + WD+ Sbjct: 72 ELAGVADRHPPELTYRTRAGVDAQRIDKHPAYVEMERVAFAEFGLAAASHRGGVLGWDKP 131 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSR 181 P + A YL Q E G S+T + L P + + P + ++ Sbjct: 132 MPPAAKY-------ALTYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVGRYLPNLTTQ 184 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHKWFLSSPM 239 +D + M +TE+ G+D+AA ++ + ++G + L G KWF S+P Sbjct: 185 VFDDLYQGAMF---------MTEQGAGSDVAATATRAVRDASAEGGWRLLGDKWFCSNPD 235 Query: 240 SDAFIMLAQVEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++LA+VE G FL+PR L DGS N RLK+K+G RS A+ E+ Sbjct: 236 AALAMVLARVEDEAGNAVPGHKGVSLFLLPRKLADGSDNHYRIIRLKDKLGTRSMASGEI 295 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 +L+G+ + DM L + + + MR +L E + AR R G L Sbjct: 296 RLEGAHAWLVGEPGRGFVQMADMINNSRLSNGVRAAGLMRRALTEGLFIARERQAFGKRL 355 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKM 407 D P+M+R + + L A + F+ A + A + E AY RI+ P+ K+ C+ Sbjct: 356 QDMPLMRRQLLKLTLPTEQARTMVFQTAEALRRADA-GEADAYPLMRILTPLIKFRACRD 414 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V +AME GG GYIEE S R R++ SI G+ N + LDVL + + Sbjct: 415 ARKVTGDAMEIRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAVRR 467 >gi|86563381|ref|NP_001033378.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis elegans] gi|3881018|emb|CAA21490.1| C. elegans protein Y45F3A.3a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 617 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 22/440 (5%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 V +L G+ + S + L R A P+L G+R DK+ WH L + + Sbjct: 68 VAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEE 126 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173 G+ ++ S +P VR+ H++ A+L+L + AG + P + V +T+ ++ Sbjct: 127 GVISIGYEDSVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYG- 181 Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK 232 K+ + D K + G +TEK+GG+D+A + +I Y L G+K Sbjct: 182 -KHKLATEAVDRLRSRDPSKAWTS-GQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYK 239 Query: 233 WFLSSPMSDAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNR 282 WF S+ +D + LA++ EG G FL+ E G+ NG+ RLKNK+G + Sbjct: 240 WFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRLKNKLGTK 299 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 T EL +GD + +M + + +A+ S+ MR ++ A Y+ +R Sbjct: 300 QLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKR 359 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPI 399 V G P+ +A + +D + L F RL + KS EA R++ P+ Sbjct: 360 VVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPV 419 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K + K A +++E +EC GG GY+E+ + R++ I G+ N + LDVL + Sbjct: 420 LKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFS 479 Query: 460 KGTNLFEQLFSTLEQDLGSS 479 N+ +EQ LG++ Sbjct: 480 GKENILLAFGKRVEQLLGNT 499 >gi|86563383|ref|NP_001033379.1| Acyl CoA DeHydrogenase family member (acdh-11) [Caenorhabditis elegans] gi|74832016|emb|CAJ30236.1| C. elegans protein Y45F3A.3b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 608 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 22/440 (5%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 V +L G+ + S + L R A P+L G+R DK+ WH L + + Sbjct: 59 VAADLSKFGDRITS-EVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEE 117 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173 G+ ++ S +P VR+ H++ A+L+L + AG + P + V +T+ ++ Sbjct: 118 GVISIGYEDSVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYG- 172 Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK 232 K+ + D K + G +TEK+GG+D+A + +I Y L G+K Sbjct: 173 -KHKLATEAVDRLRSRDPSKAWTS-GQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYK 230 Query: 233 WFLSSPMSDAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNR 282 WF S+ +D + LA++ EG G FL+ E G+ NG+ RLKNK+G + Sbjct: 231 WFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRLKNKLGTK 290 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 T EL +GD + +M + + +A+ S+ MR ++ A Y+ +R Sbjct: 291 QLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKR 350 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPI 399 V G P+ +A + +D + L F RL + KS EA R++ P+ Sbjct: 351 VVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPV 410 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K + K A +++E +EC GG GY+E+ + R++ I G+ N + LDVL + Sbjct: 411 LKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFS 470 Query: 460 KGTNLFEQLFSTLEQDLGSS 479 N+ +EQ LG++ Sbjct: 471 GKENILLAFGKRVEQLLGNT 490 >gi|302689643|ref|XP_003034501.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8] gi|300108196|gb|EFI99598.1| hypothetical protein SCHCODRAFT_233523 [Schizophyllum commune H4-8] Length = 591 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 213/462 (46%), Gaps = 52/462 (11%) Query: 27 QPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELE----LLGEYVLSCTAQELARMANYNT 81 Q P + N+Y++D +L +L+ P + +ELE LG+ + + +++ R + Sbjct: 8 QIPPYEEGNSYTTDPVLQSLLKRILPDEIFRELEPDLVRLGDDI-NTVIRDIHRRGEVSD 66 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P L Y G R D+++ W L + +GL ++R R AR+ Sbjct: 67 PTLVQYDQWGRRVDRLQTSEGWRKLKAIAQKEGLPALFYERKHGEFSRVDGF----ARVL 122 Query: 142 LMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 +M S+T A ++ LM TP + KD P++ SR +P + + G Sbjct: 123 MMTGDMHTIFCPISMTDGCARVIELMGTPAMKKDIFPRLISR--NPEH-------AFTAG 173 Query: 200 LGLTEKRGGTDIAAI----TSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 +TE+ GG+D++ TS G+ G Y L G KWF S+ SD + L GR G Sbjct: 174 QWMTERPGGSDVSQTETVATSTGRAHEYGPAYTLDGFKWFSSATDSDVALAL----GRSG 229 Query: 255 ----------CFLVP---RLLEDG--SP--NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 FLVP LL D SP N + RLKNK G ++ T EL T G+ Sbjct: 230 PASSGSRGLSLFLVPLRKPLLGDPAVSPISNNIFVHRLKNKFGTKALPTAELSLEGTEGY 289 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILIDQPVM 355 +G N + + + + SA+ SVS +R SL A YA+ R + GG +L D P+ Sbjct: 290 RVGPENQGVKLITPVLNITRVWSAVHSVSALRRSLFIATSYAKVRKIRGGAQLLQDTPLH 349 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAVI 412 +A + L A T SF + + +++ + +EE RIM P K + + A I Sbjct: 350 VAQLASLHLTYRALTHFSFGVVHLLGKSEYGTASTEERHLLRIMTPTVKAFATEKAVPAI 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 A+AM +GG+GY+EE I R R++ I G+ + LD+ Sbjct: 410 ADAMSALGGNGYMEENDIPRLLRDAMVERIWEGTTTVLSLDL 451 >gi|94314812|ref|YP_588021.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93358664|gb|ABF12752.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] Length = 598 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 129/460 (28%), Positives = 208/460 (45%), Gaps = 45/460 (9%) Query: 33 GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G + +++D L AL+ A+ + + LE +G ELA A++ P L Sbjct: 28 GASLFTADPDLRALLPLYLPADLFNHLLPHLERMGALA-GGVLDELANEADHAPPTLSHR 86 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHD-GLHCSI-------WDRSFEPVVRKQAHKIRAAR 139 G ++ HP++ L R + + GL + WD+ P + A Sbjct: 87 IRTGLDAQRIHKHPSYVELERVAFSEFGLAAASHRGGVLGWDKPMPPAAKY-------AL 139 Query: 140 LYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 YL Q E G S+T + L P + + P + ++ +D + M Sbjct: 140 TYLFVQAEFGLCCPLSMTDSLTRTLRKFGDPALVDRFLPNLTTQVFDDLYQGAMF----- 194 Query: 198 IGLGLTEKRGGTDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSDAFIMLAQVE----- 250 +TE+ G+D+AA T++ + ++G + L G KWF S+P + ++LA+VE Sbjct: 195 ----MTEQGAGSDVAATTTRAIRDGNAEGGWRLVGDKWFCSNPDAALAMVLARVEEADGS 250 Query: 251 -----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 V FL+PR L DGS N RLK+K+G RS A+ E+ +++G+L Sbjct: 251 AVAGIKGVSLFLLPRTLADGSANHFRIIRLKDKLGTRSMASGEIRLEGAHAYMVGELGRG 310 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + DM L + + + MR +L E AR R G L D P+M+R + + L Sbjct: 311 FVQMADMINNSRLSNGVRAAGLMRRALTEGQFIARERRAFGKRLADMPLMRRQLLKLTLP 370 Query: 366 IAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A + F+ A + A + +A RI+ P+ K+ C+ A V +AME GG GY Sbjct: 371 TEQARTMVFQTAEALRRADAGDADAYPLMRILTPLIKFRACRDARKVTGDAMEIRGGCGY 430 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 IEE S R R++ SI G+ N + LDVL + + +L Sbjct: 431 IEEWSDPRLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 470 >gi|163793385|ref|ZP_02187360.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199] gi|159181187|gb|EDP65702.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199] Length = 574 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 133/441 (30%), Positives = 201/441 (45%), Gaps = 23/441 (5%) Query: 33 GMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 G+NAY D L L+ A+ + + E LG+ ++ +LA A+ N P LH Sbjct: 26 GINAYRDDEALQQLLALYLPASDLATLRPTFESLGD-LIGGRLDQLAHSADRNPPTLHPR 84 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G +E HPA+ + R + ++ R + H + A YL AQ E Sbjct: 85 DRQGRDRQWIEKHPAYTEMERIGYGEFAMAAMSHRPALGLNHPVPHAAKYAIQYLFAQAE 144 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G L S+T A L T R D P + R Y P A + + + +TE+ Sbjct: 145 FGLLCPISMTDA----LTRTIRHFAD--PALVER-YLPGLTADDLEHQIQGAMFMTERAA 197 Query: 208 GTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPR 260 G+D+ A ++ + +G + L G KWF S+ + ++LA+ EG V FL+PR Sbjct: 198 GSDVGATITRA--VPNGNAWRLHGDKWFCSNTDAGLALVLARPEGAPSGIKGVSLFLLPR 255 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 L +G N RLK+K+G RS + E+ +++G+ + +M L + Sbjct: 256 DLPEGGRNAYRIVRLKDKLGTRSMPSGEITLEGALAWMVGEPGQGFVQMAEMINQSRLSN 315 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A+ S MR + EA+ AR R G LID P+ +R + I L A ++ A++ Sbjct: 316 AVRSAGMMRRAWREAVTVARGRSAFGRRLIDMPLQQRQLLKILLPGEQALSMVLYTADAL 375 Query: 381 DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A S E A RI+ P+ K+ C+ A V +AME GG GYIEE R R+S Sbjct: 376 SRADSGDAEGKALRRILTPLVKFRVCRDARKVTGDAMEARGGVGYIEEWIEPRLLRDSHL 435 Query: 440 NSILLGSGNAMVLDVLNLLEK 460 SI G+ N + LDVL K Sbjct: 436 GSIWEGTSNIVALDVLRAARK 456 >gi|120610521|ref|YP_970199.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588985|gb|ABM32425.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 571 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 106/334 (31%), Positives = 168/334 (50%), Gaps = 20/334 (5%) Query: 141 YLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL Q E G S+T + L +P + + P + S ++D + M Sbjct: 131 YLFVQAEFGLCCPVSMTDSLTRTLRRFGSPELLARYLPALTSLDFDELAQGAMF------ 184 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 +TE+ G+DIAA ++ +DG + L+G KWF S+P + ++LA+++G Sbjct: 185 ---MTEQGAGSDIAATATRATPAADGSWRLTGDKWFCSNPDAGFAMVLARIDGAPEGLKG 241 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 V FL+PR LEDGS N RLK+K+G RS A+ E+ + L+G+ + DM Sbjct: 242 VSLFLLPRRLEDGSLNHYRIVRLKDKLGTRSMASGEIRLAGAVAHLVGEEGRGFVQMADM 301 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + + + MR +++EA A R G L D P+M+R + + + A + Sbjct: 302 VNNSRLSNGVRAAGLMRRAVSEAEFVASERRAFGRALQDMPLMRRQLDKLRVPAEQARTM 361 Query: 373 SFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 F+ A + + + E+ AYA RI+ P+ K+ C+ A V +AME GG GYIEE S Sbjct: 362 VFQTARALARSDA-GEKDAYALLRILTPLIKFRACRDARKVTGDAMEVRGGCGYIEEFSD 420 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 AR R++ SI G+ N + LDVL + + +L Sbjct: 421 ARLVRDAHLGSIWEGTSNIVALDVLRAIRREGSL 454 >gi|33591863|ref|NP_879507.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33571506|emb|CAE44996.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332381280|gb|AEE66127.1| acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 600 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 125/442 (28%), Positives = 197/442 (44%), Gaps = 56/442 (12%) Query: 43 LVALIANFPSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100 L+AL A+ + H + LGE + T ELA A+ + P L G D++++H Sbjct: 41 LLALCADTEELRHFTPHFDRLGE-LAGNTLDELADAADKHPPTLAPRDRHGRDVDRIDYH 99 Query: 101 PAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 PA+ + R + + +I W P+V+ YL +Q E G Sbjct: 100 PAYREMERIAFSEFGMAAIGHKPGVLGWPGHASPLVKYTL-------TYLFSQAEFG--- 149 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM-------QKTSVAIGLGLTEK 205 + P D A + R D T K M +T + IG +TE+ Sbjct: 150 ------------LLCPVNGNDAAVGMIQRYADDTLKQRMAGMLSQDMRTLLKIGHFMTER 197 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVP 259 GG+D+A I + + + + G KWF S+ +D ++LA+ EG +G F+VP Sbjct: 198 TGGSDLAGIGTHA-RFDGSAWKIYGEKWFYSAIDADYVLVLARPEGAPAGTRGLGMFVVP 256 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKIL 315 RLLEDG+ N RLKNK+G RS AT E+ F +G + + P+ + Sbjct: 257 RLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQGRDGIRYAVLPINASR-- 314 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + MR L E++H+ARRR G +I P+MKR++ I + A + Sbjct: 315 --LSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKIMVPTEQALSACMF 372 Query: 376 LANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A++ A + + R+ + K+ C+ V AME GGSGYIEE AR Sbjct: 373 VASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGGSGYIEEWINARLV 432 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R++ + G+ N LD++ Sbjct: 433 RDAQTGLLWEGTSNINALDIVT 454 >gi|33603779|ref|NP_891339.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33577904|emb|CAE35169.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 600 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 125/442 (28%), Positives = 197/442 (44%), Gaps = 56/442 (12%) Query: 43 LVALIANFPSVVH--KELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFH 100 L+AL A+ + H + LGE + T ELA A+ + P L G D++++H Sbjct: 41 LLALCADTEELRHFTPHFDRLGE-LAGNTLDELADAADKHPPTLAPRDRHGRDVDRIDYH 99 Query: 101 PAWHALLRRSIHDGLHCSI--------WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 PA+ + R + + +I W P+V+ YL +Q E G Sbjct: 100 PAYREMERIAFSEFGMAAIGHKPGVLGWPGHASPLVKYTL-------TYLFSQAEFG--- 149 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQ-------KTSVAIGLGLTEK 205 + P D A + R D T K M +T + IG +TE+ Sbjct: 150 ------------LLCPVNGNDAAVGMIQRYADDTLKQRMTGMLSQDMRTLLKIGHFMTER 197 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVP 259 GG+D+A I + + + + G KWF S+ +D ++LA+ EG +G F+VP Sbjct: 198 TGGSDLAGIGTHA-RFDGSAWKIYGEKWFCSAIDADYVLVLARPEGAPAGTRGLGMFVVP 256 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKIL 315 RLLEDG+ N RLKNK+G RS AT E+ F +G + + P+ + Sbjct: 257 RLLEDGTRNRYRIARLKNKLGTRSMATGEVVFDGALAHAIGQGRDGIRYAVLPINASR-- 314 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + MR L E++H+ARRR G +I P+MKR++ I + A + Sbjct: 315 --LSHGVRAAGMMRRCLNESLHFARRRAAFGKPVIAHPLMKRSLLKIMVPTEQALSACMF 372 Query: 376 LANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A++ A + + R+ + K+ C+ V AME GGSGYIEE AR Sbjct: 373 VASTMHRAGADDPRDRKIVRLATALLKFRACRDNATVATAAMEVRGGSGYIEEWINARLV 432 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R++ + G+ N LD++ Sbjct: 433 RDAQTGLLWEGTSNINALDIVT 454 >gi|121600118|ref|YP_993575.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei SAVP1] gi|167003817|ref|ZP_02269597.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] gi|121228928|gb|ABM51446.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1] gi|243060716|gb|EES42902.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] Length = 597 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 213/449 (47%), Gaps = 39/449 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++A +A + +A RI+ + K+ C+ A V +AME GG+GYIEE S A Sbjct: 367 FMQIALLLAKADTGDAQAGGCVRILTLLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDA 426 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ SI G+ N + LDV +++ Sbjct: 427 RVLRDAHLGSIWEGTSNIVALDVARAVKR 455 >gi|33600084|ref|NP_887644.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567682|emb|CAE31596.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 552 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 132/453 (29%), Positives = 213/453 (47%), Gaps = 38/453 (8%) Query: 29 PLFIGMNAYSSDSLLVALIANF--PSVV---HKELELLGEYVLSCTAQELARMANYNTPQ 83 P +G N Y +D+ L AL++ + P ++ L LGE + ++LA A+ +TP+ Sbjct: 15 PDSLGQNLYLADADLPALLSLYLAPDLLAHLTPHLHRLGE-LAGGRLEQLAAQADKHTPE 73 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVRKQAHKIRAAR--- 139 L G +V HPA+ L R + + GL + S P V + AA Sbjct: 74 LVVRTRQGHDCSEVVKHPAYVELERWAFSEFGLAAA----SHAPGVLGWHEPLPAAAKYT 129 Query: 140 -LYLMAQLEAGHLMSPSVTSASMVALMTT---PRVHKDWAPKIFSREYDPTNKAPMQKTS 195 YL +Q E G L P + S + P + + + ++ S ++D + M Sbjct: 130 LFYLFSQSEYG-LTCPVNMTDSFTRTLKKYGEPALVQRYLARLTSLDFDTYYQGAMF--- 185 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVE---- 250 +TE+ G+DIA + ++ DG + LSG KWF S+ +D ++LA+ + Sbjct: 186 ------MTEQGAGSDIAQTAATARR--DGEHWLLSGDKWFCSNASADLAMVLARPDDAPA 237 Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 V FL+PR+ DG+PN RLK+K+G RS A+ E+ +L+G++ Sbjct: 238 GMAGVSLFLMPRVKADGTPNAYRIIRLKDKLGTRSMASGEIRLEGAQAYLIGEVGKGFQQ 297 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +M L + + S + MR +L+EA + A R G L D P+++R + + L Sbjct: 298 MAEMVNSSRLSNGVRSGALMRRALSEASYVAEHRRAFGKRLADLPLIRRQLDKMRLMTEQ 357 Query: 369 ATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A ++ A + A E A RIM P+ K+ C+ A V +AME GG GYIEE Sbjct: 358 ARTFAYHTAQALRGADEGDETARRVVRIMTPLIKFRACRDARKVTGDAMEVRGGCGYIEE 417 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 AR R++ SI G+ N + LDV + + Sbjct: 418 WPEARLLRDAHLGSIWEGTSNIVALDVYRAINR 450 >gi|118098887|ref|XP_415303.2| PREDICTED: similar to LOC446287 protein [Gallus gallus] Length = 586 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 133/487 (27%), Positives = 215/487 (44%), Gaps = 40/487 (8%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVA-LIANFP----SVVHKELELLGEYVL 66 M + +++LF P N Y D+LL + L A+ P V +ELE G +L Sbjct: 1 MPVARREAETLFQERPEP----GNQYLEDALLRSYLEAHLPPKVLEEVSQELEGFGNRLL 56 Query: 67 SCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEP 126 + + L N P Y G+R D + AW + + +GL ++R + Sbjct: 57 T-KIRPLGWECELNPPVFRQYDAWGQRVDHIVTCSAWKRMKEIAAEEGLIAEAYERRYSN 115 Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYD 184 R +A +LYL + G ++T +A ++ + TP K+ + SR D Sbjct: 116 WSRV----YQAVKLYLFSTASGGFNCPLAMTDGAAKVIESLGTPASLKNAFDHLTSR--D 169 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAF 243 P + G +TE+RGG+D+A T +K DG Y L G KWF S+ SD Sbjct: 170 P-------RKFWTSGQWMTERRGGSDVANGTETVARKQPDGTYRLYGFKWFTSAADSDMA 222 Query: 244 IMLAQV----------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + LA++ G + F + E+ N + QRLK K+G R AT EL + Sbjct: 223 LTLARIVDAEGHVKQGSGGLSLFFLRVRDEEEKLNSIQVQRLKEKLGTRQMATAELWLNG 282 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 L+ + +M + + + I +V+ MR ++ + YA +R V G +L D P Sbjct: 283 AKAELISAEGRGVASISNMLNITRIHNVIGAVASMRRMISLSREYALKRVVFGKLLKDHP 342 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR---SEEAAYARIMAPITKYWCCKMAPA 410 + + IA + + A L + A++ ++ R++ P+ K + K A A Sbjct: 343 LHMQTIARMEVQTRGAFLLLMEMVRLLGLAETNMASEQDQLLLRLLVPVAKLYTGKQATA 402 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFEQLF 469 V EAME GG GY+E+ + R++ SI G+ N + LDVL L K + F Sbjct: 403 VATEAMESFGGQGYMEDTGLPVIVRDALVLSIWEGTTNVLSLDVLRSLTKSQGQVMAVFF 462 Query: 470 STLEQDL 476 ST++ L Sbjct: 463 STVQNKL 469 >gi|89272879|emb|CAJ82159.1| novel acyl-CoA-dehydrogenase protein [Xenopus (Silurana) tropicalis] Length = 587 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 32/425 (7%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 L R N P+L Y G R D++ AW + S +GL ++R + R Sbjct: 62 LGRDCELNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSRL-- 119 Query: 133 HKIRAARLYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 I+ +LYL + AG P + +A ++ + P +D + SR +P+N Sbjct: 120 --IQVVKLYLYSP-SAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSN-- 172 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 G +TE+RGG+D+A T + DG Y L G+KWF S+ S+ + L + Sbjct: 173 -----FWTSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGR 227 Query: 249 VEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 V G F + +G+ NG+ QRLK K+G R T EL Sbjct: 228 VVDNHGNTVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALK 287 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + + M + + + I +V+GMR + A YA +R V G ++ D P+ + Sbjct: 288 ISPEGRGVASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQT 347 Query: 359 IADIALDIAAATALSFRLAN--SFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEA 415 +A + ++ A + ++ +E +E+ R++ P+TK + K A +VI+E Sbjct: 348 MARMEVEARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEG 407 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474 +EC GG GY+E+ + R++ +I G+ N + LDVL ++++ + LFS ++ Sbjct: 408 LECFGGQGYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQE 467 Query: 475 DLGSS 479 L ++ Sbjct: 468 KLDAA 472 >gi|71896191|ref|NP_001025577.1| MGC107841 protein [Xenopus (Silurana) tropicalis] gi|60551258|gb|AAH91017.1| MGC107841 protein [Xenopus (Silurana) tropicalis] Length = 587 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 32/425 (7%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 L R N P+L Y G R D++ AW + S +GL ++R + R Sbjct: 62 LGRDCELNPPRLQQYDAWGRRVDQIITCSAWKKMKELSAEEGLVAEAYERRYSSWSRL-- 119 Query: 133 HKIRAARLYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 I+ +LYL + AG P + +A ++ + P +D + SR +P+N Sbjct: 120 --IQVVKLYLYSP-SAGLFTCPLAMTDGAAKVIESLGVPEPLQDAYKHLTSR--NPSN-- 172 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 G +TE+RGG+D+A T + DG Y L G+KWF S+ S+ + L + Sbjct: 173 -----FWTSGQWMTERRGGSDVAGGTETIAHRQDDGTYRLRGYKWFTSATDSNMSLTLGR 227 Query: 249 VEGRVG----------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 V G F + +G+ NG+ QRLK K+G R T EL Sbjct: 228 VVDNHGNTVLGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALK 287 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + + M + + + I +V+GMR + A YA +R V G ++ D P+ + Sbjct: 288 ISPEGRGVASISSMLTITRIYNTIFAVAGMRRIINLARDYAAKRFVFGKLIKDHPLHIQT 347 Query: 359 IADIALDIAAATALSFRLAN--SFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEA 415 +A + ++ A + ++ +E +E+ R++ P+TK + K A +VI+E Sbjct: 348 MARMEVEARGAFLIMMEISRLLGLEETNMATEQDQLLLRLLIPVTKLYTGKQALSVISEG 407 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474 +EC GG GY+E+ + R++ +I G+ N + LDVL ++++ + LFS ++ Sbjct: 408 LECFGGQGYMEDTGLPVMLRDTQVLTIWEGTTNILSLDVLRSVIKSKGEVLSALFSVTQE 467 Query: 475 DLGSS 479 L ++ Sbjct: 468 KLDAA 472 >gi|237798438|ref|ZP_04586899.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021289|gb|EGI01346.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 242 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 116/214 (54%), Gaps = 2/214 (0%) Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 I S + MR +L +A H+ R V G +L QP+M+ +AD+AL+ AA AL+ RL + D Sbjct: 2 IGSSALMRQALTQATHHCAHRAVGGRLLAGQPLMQNVLADLALESEAALALTLRLGRALD 61 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 E + R++ + KYW CK APA+I EA EC+GG+GY+E+ + R YRE+P NS Sbjct: 62 HLDD-DHERRFVRLITAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNS 120 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKV-ITILRDSISLCKEDKGL 500 GSGN LDVL L K + LF L G + I+ L+ + + + Sbjct: 121 TWEGSGNVQCLDVLRTLSKEPGALDALFDELGDGHGDRHLALHISKLKTAFHDTGDIEYR 180 Query: 501 ARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 AR LTE IA+A L AG ++D F+ R Sbjct: 181 ARQLTEDIAVAVQGKLLLEAGNAAVSDGFIAGRI 214 >gi|51258380|gb|AAH80048.1| LOC446287 protein [Xenopus laevis] Length = 636 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 114/422 (27%), Positives = 192/422 (45%), Gaps = 32/422 (7%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 L R N P+L Y G R D++ AW + S +GL ++R + R Sbjct: 111 LGRDCELNLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVAEAYERRYSSWSRL-- 168 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPM 191 I+ ++YL + AG P + ++ + V PK Y+ T++ P Sbjct: 169 --IQVVKIYLYSP-SAGLFTCPLAMTDGAAKVIESLGV-----PKPLQNAYNHLTSRNP- 219 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 + G +TE+RGG+D+A T + DG Y L G+KWF S+ SD + L +V Sbjct: 220 -SSFWTSGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWFTSATDSDMSLTLGRVV 278 Query: 251 GRVGCFLVPR------LLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 G +V LE +G+ NG+ QRLK K+G R T EL + Sbjct: 279 DNHGNTVVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDGVKALQIS 338 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + +M + + + I +V+GMR + A YA +R V G ++ + P+ + +A Sbjct: 339 PEGRGVASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFVFGKLIKEHPLHIQTMA 398 Query: 361 DIALDIAAATALSF-----RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +++ A A F RL + + ++ R++ P+ K + K A AVI+E Sbjct: 399 --RMEVEARGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAKLYTGKQALAVISEG 456 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQ 474 +EC GG GY+E+ + R++ +I G+ N + LDVL ++++ + FST ++ Sbjct: 457 LECFGGQGYMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKSNGKVLSAFFSTAQE 516 Query: 475 DL 476 L Sbjct: 517 KL 518 >gi|268574760|ref|XP_002642359.1| Hypothetical protein CBG18356 [Caenorhabditis briggsae] Length = 615 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 216/480 (45%), Gaps = 38/480 (7%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMA 77 F + P L N Y D +L ++ S V ++L G+ + S Q L R A Sbjct: 36 FNQDAPTLH---NPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITSEIDQ-LGRQA 91 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 P+L G+R DK+ W L + +G+ ++ +P VR+ H++ Sbjct: 92 ELEQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR-IHQV-- 148 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--KDWAPKIFSR--EYDPTNKAPMQK 193 A+L+L + AG + P + V +T+ ++ + A + R DPT Sbjct: 149 AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYGKHELATETVDRLRSRDPTK------ 201 Query: 194 TSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--- 249 + G +TEK+GG+D+A + +I Y L G+KWF S+ +D + LA+V Sbjct: 202 -AWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDS 260 Query: 250 -----EGRVGCFL-VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 EG G L + R+ +D G+ NG+ RLKNK+G + T EL +G+ Sbjct: 261 DGNAVEGSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQ 320 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M + + +A+ S+ MR ++ A Y+ +R V G P+ IA + Sbjct: 321 GRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKL 380 Query: 363 ALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 ++ + L F RL + KS EA R++ P+ K + K A +++E +EC Sbjct: 381 EIETRGSMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECF 440 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GG GY+E+ + R++ I G+ N + LDVL + N+ +EQ L ++ Sbjct: 441 GGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANT 500 >gi|309357473|emb|CAP35829.2| hypothetical protein CBG_18356 [Caenorhabditis briggsae AF16] Length = 616 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 216/480 (45%), Gaps = 38/480 (7%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIANFPSV-----VHKELELLGEYVLSCTAQELARMA 77 F + P L N Y D +L ++ S V ++L G+ + S Q L R A Sbjct: 36 FNQDAPTLH---NPYKDDPILDRILRRLLSESQYLRVAEDLTKFGDRITSEIDQ-LGRQA 91 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 P+L G+R DK+ W L + +G+ ++ +P VR+ H++ Sbjct: 92 ELEQPRLEQQDAWGKRIDKLIVCNEWTKLKQICAEEGVISIGYENDVDPFVRR-IHQV-- 148 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--KDWAPKIFSR--EYDPTNKAPMQK 193 A+L+L + AG + P + V +T+ ++ + A + R DPT Sbjct: 149 AKLFLFSP-SAGLVSCPMAMTDGAVKTLTSLNLYGKHELATETVDRLRSRDPTK------ 201 Query: 194 TSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--- 249 + G +TEK+GG+D+A + +I Y L G+KWF S+ +D + LA+V Sbjct: 202 -AWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAIDADVALTLARVVDS 260 Query: 250 -----EGRVGCFL-VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 EG G L + R+ +D G+ NG+ RLKNK+G + T EL +G+ Sbjct: 261 DGNAVEGSRGLSLFLLRIRDDAGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEQ 320 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + +M + + +A+ S+ MR ++ A Y+ +R V G P+ IA + Sbjct: 321 GRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTSTIAKL 380 Query: 363 ALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 ++ + L F RL + KS EA R++ P+ K + K A +++E +EC Sbjct: 381 EIETRGSMLLLFESARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPLVSEGIECF 440 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GG GY+E+ + R++ I G+ N + LDVL + N+ +EQ L ++ Sbjct: 441 GGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLANT 500 >gi|42524329|ref|NP_969709.1| acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100] gi|39576538|emb|CAE80702.1| probable acyl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100] Length = 505 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/496 (25%), Positives = 216/496 (43%), Gaps = 60/496 (12%) Query: 35 NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLS---CTAQELARMANYNTPQLHA 86 N + SD L ++ A+ V LE LGE ++ AQE + P Sbjct: 13 NTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTDMLTWAQEAESQPPVHVP---- 68 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 + P G R D ++ W AL + + +G+ + +DR F A+R+Y MA L Sbjct: 69 FDPWGRRIDDIKTSHGWKALEKVAAEEGIVATAYDRRFGA----------ASRVYQMALL 118 Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM--------QKTSVAI 198 +L SPS A+ + P D A + D KA + KT Sbjct: 119 ---YLYSPSS------AIFSCPLAMTDGAARALELYADADLKARVLPHLLSRDPKTFWTA 169 Query: 199 GLGLTEKRGGTDIAAITSQGQKISD-----GIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252 G +TE+ GG+D++ ++ + + L G KWF S+ S + LA+ +G Sbjct: 170 GQWMTERTGGSDVSGTSTDAHPFTGTSEFGATHSLHGTKWFTSATTSQMALTLARPDGAA 229 Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + F + + G N + RLK+K+G ++ T EL T ++G + Sbjct: 230 PGSRGLSLFFLELRNDKGELNHIQIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVK 289 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + + + ++I +V +R +L A Y+ +R G +L D P+ K + + D Sbjct: 290 RIASVLNITRIYNSICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFR 349 Query: 368 AATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A SF +AN + ++ + E R++ PI K + K + + +E +E GG+GY Sbjct: 350 KCIAFSFFVANLLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVEMFGGAGY 409 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ--DLGSSGKK 482 +E+ I R R++ SI G+ N + LD+L EK +Q LEQ L +G + Sbjct: 410 VEDTGIPRLLRDAQVFSIWEGTTNVLSLDMLRAFEK-----DQAGQILEQFLVLNEAGSE 464 Query: 483 VITILRDSISLCKEDK 498 + L+ ++L E K Sbjct: 465 ELVRLQKLLTLSGEQK 480 >gi|148222252|ref|NP_001086464.1| hypothetical protein LOC446287 [Xenopus laevis] gi|86577742|gb|AAI12957.1| LOC446287 protein [Xenopus laevis] Length = 587 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 118/429 (27%), Positives = 189/429 (44%), Gaps = 46/429 (10%) Query: 73 LARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQA 132 L R N P+L Y G R D++ AW + S +GL ++R + R Sbjct: 62 LGRDCELNLPRLQQYDAWGRRVDQIITCSAWKKMKEVSAEEGLVAEAYERRYSSWSRL-- 119 Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR--EYDPTNKAP 190 I+ ++YL SPS L T P D A K+ +P A Sbjct: 120 --IQVIKIYLY---------SPSA------GLFTCPLAMTDGAAKVIESLGVPEPLQNAY 162 Query: 191 MQKTS------VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAF 243 TS G +TE+RGG+D+A T + DG Y L G+KWF S+ SD Sbjct: 163 NHLTSRNPSSFWTSGQWMTERRGGSDVAVGTETIAHRQEDGTYRLHGYKWFTSATDSDMS 222 Query: 244 IMLAQVEGRVGCFLVPR------LLE----DGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + L +V G +V LE +G+ NG+ QRLK K+G R T EL Sbjct: 223 LTLGRVVDNHGNTVVGTKGLSLFYLEVRDAEGNLNGIEVQRLKEKLGTRQVPTAELLLDG 282 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 + + +M + + + I +V+GMR + A YA +R V G ++ + P Sbjct: 283 VKALQISPEGRGVASISNMLTITRIHNTISAVAGMRRIINLARDYAAKRFVFGKLIKEHP 342 Query: 354 VMKRAIADIALDIAAATALSF-----RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 + + +A +++ A A F RL + + ++ R++ P+ K + K A Sbjct: 343 LHIQTMA--RMEVEARGAFLFLMEISRLLGLEETNMATQQDQHLLRLLTPVAKLYTGKQA 400 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQ 467 AVI+E +EC GG GY+E+ + R++ +I G+ N + LDVL ++++ + Sbjct: 401 LAVISEGLECFGGQGYMEDTGLPAMLRDAQVLTIWEGTTNILSLDVLRSVIKSNGKVLSA 460 Query: 468 LFSTLEQDL 476 FST ++ L Sbjct: 461 FFSTAQEKL 469 >gi|167895105|ref|ZP_02482507.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 7894] Length = 430 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 121/422 (28%), Positives = 197/422 (46%), Gaps = 35/422 (8%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 GE + ++ HP + L R + ++ R P ++ A +L Q Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAP-----PPLVKYALTFLFVQA 137 Query: 147 EAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 E G S+T + L + + + + P++ SR++D + M +TE Sbjct: 138 EFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDVLYQGAMF---------MTE 188 Query: 205 KRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254 + G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG + Sbjct: 189 QAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKGLA 248 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 249 LFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADMIN 308 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 309 MSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFM 368 Query: 375 RLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++A +A + +A RI+ P+ K+ C+ A V +AME GG+GYIEE S AR Sbjct: 369 QIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRVAGDAMEVRGGTGYIEEWSDARV 428 Query: 434 YR 435 R Sbjct: 429 LR 430 >gi|238579210|ref|XP_002388976.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553] gi|215450767|gb|EEB89906.1| hypothetical protein MPER_11950 [Moniliophthora perniciosa FA553] Length = 548 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 117/411 (28%), Positives = 188/411 (45%), Gaps = 37/411 (9%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 ++L PQL Y G R D++ W L + +G+ ++R ++ R Sbjct: 12 RQLGSPHRVTPPQLVQYDQWGRRIDELRTSDGWKNLKATAQKEGIPAIFYERKYQEHSR- 70 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 + A + + EA +S + +A ++ L+ TP + K P++ +R DPT+ Sbjct: 71 -VYGFVKAFMMVGDCHEAFCPISMTDGAARVLELLGTPGMKKHVFPRLIAR--DPTH--- 124 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-----YCLSGHKWFLSSPMSDAFIM 245 + G +TE+ GG+D++ I + Q + Y L G KWF S+ SD + Sbjct: 125 ----AFVSGQWMTERPGGSDVSQIETTAQHMGKTHRLGPHYLLHGFKWFSSATDSDISVA 180 Query: 246 LAQV----EGRVGC--FLVP------RLLEDGSP----NGLCYQRLKNKIGNRSNATVEL 289 LA+ EG G FLVP R D +P NG+ RLKNKIG + T EL Sbjct: 181 LARTGTLQEGSRGLSLFLVPLRRPLLRDPTDPTPSPISNGIRVHRLKNKIGTHTLPTAEL 240 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347 T G+L+G + + + + SAI S +R LA A Y+ R ++GG Sbjct: 241 SLEYTEGYLIGKPGQGVRSITPLLNITRVWSAIASTGALRRCLAIATAYSDVRAINGGKT 300 Query: 348 ILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWC 404 L D P+ +A I+L A T L+F RL + + +E R++ P+ K + Sbjct: 301 FLRDTPIHVAQLAKISLVYRALTHLTFGVIRLVGKTECNVADEQEKLQLRLLTPLVKAFA 360 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + A + EAM +GG+GY+EE I R R++ I G+ + LD++ Sbjct: 361 AEKAVTAMEEAMTALGGAGYMEENDIGRMIRDALVEKIWEGTTTVLALDLV 411 >gi|198434786|ref|XP_002132169.1| PREDICTED: similar to MGC107841 protein [Ciona intestinalis] Length = 623 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 126/488 (25%), Positives = 207/488 (42%), Gaps = 59/488 (12%) Query: 9 RLAMNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSV----VHKELELLGE 63 R + HQ + F P + +N Y D LL + + N P + +L+ GE Sbjct: 26 RCKNTKYHQAAVGSFTQEAPSV---LNPYQCDGLLKSYLQRNIPKEHFQHISMDLQNFGE 82 Query: 64 YVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRS 123 + + E+ + + P L Y G R ++VE W+ + S +GL + R Sbjct: 83 TIKN-EITEMGQKCEASPPTLKQYDAWGNRINQVETCNEWNQMKNISAREGLIAHGYTRQ 141 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183 F + +R+Y A+L L SP + P D A + R Sbjct: 142 FG----------KYSRIYQFAKL---FLFSPCS------GMYACPLAMTDGAALVLERVL 182 Query: 184 DPTNK-------------APMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLS 229 + + + +P T G +TEK GG+D+A T K D Y L Sbjct: 183 NSSEEKHSILLKAFKCLTSPNPDTFWTSGQWMTEKAGGSDVANATDTFAYKQDDKTYKLF 242 Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVG-----------CFLVPRLLEDGSP---NGLCYQRL 275 G+KWF S+ +D + LA+V R G +L R + P NG +RL Sbjct: 243 GYKWFTSATDADMALTLARVVDRDGNSLSGTKGLSLFYLETRDEDKKLPSGLNGFQVERL 302 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 K+K+G R T EL T ++GD + + M + + +++ S + MR L + Sbjct: 303 KDKLGTRQLPTGELLLDGTVAHMVGDRSNGIRLISGMLTVTRIHNSVWSAASMRRLLLLS 362 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--SFDEAKSRSE-EAAY 392 YA +R G +L D P+ + +A + ++ AA ++F + E K SE + Sbjct: 363 KDYATKRSAFGSLLNDHPLHMQTLARMEIESRAAFLVTFEVVRLLGLIEVKEGSEIDNDM 422 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 R++ P+ K + K A AV +E +E GG+GY+E+ + R++ SI G+ N + L Sbjct: 423 LRLLTPLAKLYTAKQAIAVASEGLESFGGAGYLEDTGLPSFLRDAQVLSIWEGTTNVLSL 482 Query: 453 DVLNLLEK 460 D L + K Sbjct: 483 DTLRAIAK 490 >gi|196010794|ref|XP_002115261.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens] gi|190582032|gb|EDV22106.1| hypothetical protein TRIADDRAFT_59261 [Trichoplax adhaerens] Length = 545 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 48/432 (11%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E R A N PQL + G R +++E W ++ S +GL +++ + Sbjct: 23 ENGRQAELNPPQLVTHDAWGRRINRLETSSGWKSMHAVSAQEGLVAIPYEKKY------- 75 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS---REYDP--- 185 +R+Y +A+L H S L T P D A K+ +E Sbjct: 76 ---AEWSRIYQVAKLSLFHCSS---------GLYTCPLAMTDGAAKVIEGIRKEKKSIYL 123 Query: 186 -------TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 T++ P Q + G +TEKRGG+D+ + K S+G Y L G KWF S+ Sbjct: 124 LNAYSRLTSRDPEQFWTS--GQWMTEKRGGSDVGNTETIAIKYSNGRYKLYGDKWFTSAV 181 Query: 239 MSDAFIMLAQVEG----------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 S+ LA++ F + DG N + RLKNK+G R T E Sbjct: 182 DSNIAFTLAKIANDKSNTPAGGDNPSLFYLETRNPDGELNNINVNRLKNKLGTRQLPTAE 241 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 L T + + + M + L ++I +V MR L A YA++R Sbjct: 242 LTLDGTIAEKVSEDGRGVSGISPMLTITRLHNSISAVGSMRRILTLAEAYAKQRTAFRKY 301 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLAN--SFDE-AKSRSEEAAYARIMAPITKYWCC 405 L P+ R + + ++ A L L +E KS + R++ PITK + Sbjct: 302 LCQHPLHARTLTQMEVESRGALLLVMELGRLIGLEECGKSNEQNLNLMRLLVPITKLYTA 361 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNL 464 K A +++E +EC GG GYIE+ + +R++ I G+ N + LDVL +L + ++ Sbjct: 362 KQAMQIVSEGLECFGGQGYIEDTGLPTIFRDAQVLPIWEGTTNILSLDVLRSLFKSKGSV 421 Query: 465 FEQLFSTLEQDL 476 + S++++ L Sbjct: 422 LQAFLSSVQERL 433 >gi|260803587|ref|XP_002596671.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae] gi|229281930|gb|EEN52683.1| hypothetical protein BRAFLDRAFT_122038 [Branchiostoma floridae] Length = 632 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 117/422 (27%), Positives = 182/422 (43%), Gaps = 45/422 (10%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 +L R N P L Y G R D+V AW L S +G+ ++R F Sbjct: 109 DLGRECELNPPYLQQYDAWGRRTDEVVTCQAWRTLHDISAQEGIIAIPYEREFG------ 162 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT----- 186 + +RLY +A+L H+ +P+ L + P D A K+ D Sbjct: 163 ----QWSRLYQVAKL---HMFNPAS------GLYSCPLAMTDGATKVAESTGDSVLMQTA 209 Query: 187 -----NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMS 240 ++ P Q + G +TE+RGG+D+A T DG + L G+KWF S+ + Sbjct: 210 FPHLVSRNPAQFWTS--GQWMTERRGGSDVANGTETVAVPQEDGTHRLYGYKWFSSATDA 267 Query: 241 DAFIMLAQV--------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 D + LA+V +G G F + G N + QRLKNK+G R T EL Sbjct: 268 DMTLTLARVMDSSGEVVQGTRGLSLFYLETRDSSGQLNNIQVQRLKNKLGTRQLPTGELL 327 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 + D + DM + + +++M+ MR L A Y+ RR V G ++ Sbjct: 328 LDGAVAHKVSDDGRGVAAIADMLTITRIHNSLMASGCMRRLLNLARDYSTRRRVFGKLIC 387 Query: 351 DQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + P+ + +A + + AT L RL D + ++ R++ P+TK + K Sbjct: 388 EHPLHMQTLARLETETRGATLLVLEVGRLLGLQDCKMASEQDELMLRLITPLTKLYTAKQ 447 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A A+ +E +E GG GYIE+ + R++ SI G+ N + DVL L K Q Sbjct: 448 AVALCSEGLESFGGQGYIEDTGLPTFLRDAQVLSIWEGTTNVLSHDVLRSLVKTKGAVLQ 507 Query: 468 LF 469 F Sbjct: 508 AF 509 >gi|289748322|ref|ZP_06507700.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92] gi|289688909|gb|EFD56338.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis T92] Length = 359 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 19/244 (7%) Query: 244 IMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 ++LA+ EG V FLV R DGS NG+ +RLK+K+G RS A+ E+EF + F Sbjct: 1 MVLAKPEGAPDSTRGVATFLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAF 60 Query: 298 LL-GDLNVSTGPVE--------DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 LL G+ + GP + ++ + L +A ++ R +L E++ YA +R GG Sbjct: 61 LLSGEPSADAGPSDGKGLTRMMELTNRLRLGTASFALGNARRALVESLCYAGQRRAFGGA 120 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 LID+P+M+R +A++ +D+ AA A+ F + F A R RI P+TK C++ Sbjct: 121 LIDKPLMRRKLAEMVVDVEAALAMVF---DGFGAANHRQPRCLPQRIAVPVTKLKTCRLG 177 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 V ++A+E GG+GYIE +AR R++ N+I G N + LDV +E+ T E L Sbjct: 178 ITVASDAIEIHGGNGYIETWPVARLLRDAQVNTIWEGPDNILCLDVRRGIEQ-TRAHETL 236 Query: 469 FSTL 472 + L Sbjct: 237 LARL 240 >gi|270159432|ref|ZP_06188088.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae D-4968] gi|289165758|ref|YP_003455896.1| acyl-CoA dehydrogenase [Legionella longbeachae NSW150] gi|269987771|gb|EEZ94026.1| acyl-CoA dehydrogenase domain protein [Legionella longbeachae D-4968] gi|288858931|emb|CBJ12856.1| putative acyl-CoA dehydrogenase [Legionella longbeachae NSW150] Length = 562 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 138/484 (28%), Positives = 213/484 (44%), Gaps = 41/484 (8%) Query: 27 QPPLFIGMNAYSSDSLLVA-----LIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 Q P +G N Y D +L A L + + + EL LG+ + Q L + A Sbjct: 6 QTPPCLG-NQYDDDRILKAYLEWKLPPSMLTEIQPELHHLGQRAIEDIYQ-LGQEAEAYP 63 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P+ Y P G+R D +E AW L + S + L ++R R H+ A++Y Sbjct: 64 PKHIPYDPWGKRIDHIEVSRAWKELDKISAEEKLIAIGYERRHGAFSR--IHQF--AKIY 119 Query: 142 LMAQLEAGHLMSPSVTSASMVAL---MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 L A + ++T + AL P H+ P + S DPT Sbjct: 120 LFHPSSAIYTCPLAMTDGAARALELYADKPLKHRV-LPHLISS--DPTQ-------FWTS 169 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVG 254 G +TE+ GG+D++ TS K + L+G KWF S+ S + LA++EG G Sbjct: 170 GQWMTERTGGSDVSG-TSTTAKPEGTYFLLNGDKWFTSATTSQIAMTLARIEGAPEGSKG 228 Query: 255 CFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 L L D G NG+ RLK+K+G R+ T EL NT L+G + + Sbjct: 229 LSLFYLELRDQMGKLNGISINRLKDKLGTRALPTAELTLKNTRALLIGGAGDGVKKISSL 288 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +A +V MR ++A A YA +R G L + +A++ ++ AA L Sbjct: 289 FNITRIYNACCAVGYMRRAIALARDYATKRVSFGHTLSKHGLHLETLANMQIEFTAAFHL 348 Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 F L + ++ E A R++ P+ K + K A ++ +EA+E GG+GYIE+ Sbjct: 349 VFHAIELLGKDELGEASQAERAVLRLLTPLVKLYSAKQAISLASEALESFGGAGYIEDTG 408 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK---GTNLFEQLFSTLE----QDLGSSGKK 482 + + R + SI G+ N + LDVL + K E + LE QDL S K Sbjct: 409 LPQLLRNAQVLSIWEGTTNILSLDVLRAIHKENAAVAFLEDIHKRLEQIKLQDLIQSKVK 468 Query: 483 VITI 486 V I Sbjct: 469 VQYI 472 >gi|330823859|ref|YP_004387162.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329309231|gb|AEB83646.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 612 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 118/402 (29%), Positives = 186/402 (46%), Gaps = 34/402 (8%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWH-----ALLRRSIHDGLH---CSIWDRS 123 ELA +A+ + P LHA GE D VE+HPA+ A + H H + + Sbjct: 74 ELATVADKHGPVLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGT 133 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSR 181 PV + A YL Q E G + SVT S ++ + + P++ + Sbjct: 134 LSPVTKY-------AFQYLFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLPRMLAE 186 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 + + K +TEK GG+D+ + + + I DG + L G KWF S +D Sbjct: 187 KLEDLWKGTQ---------FMTEKAGGSDVGQVETTARLI-DGQWHLFGEKWFSSHVDAD 236 Query: 242 AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 ++LA+ E + F +PR EDGS N RLK+K+G RS A+ EL F Sbjct: 237 VALILARPENAPAGTRGLALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAF 296 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +L+GD + + L L A+ + + MR L EA+ A RH G ++D P+M Sbjct: 297 AYLVGDPTRGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLM 356 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAE 414 +R + I + AA +++ A+ + + ++AA A R++ P+ K C+ V Sbjct: 357 QRQLLKIMVPTEAALSVTLATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATG 416 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 AME GG+GYIE+ AR R++ + G+ N LD + Sbjct: 417 AMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIG 458 >gi|33595570|ref|NP_883213.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565648|emb|CAE40296.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 615 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 129/482 (26%), Positives = 210/482 (43%), Gaps = 67/482 (13%) Query: 16 HQPSDSLFALNQP-----------PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY 64 +QP FA +P P G++ ++ D L L++ + V ELE + Sbjct: 3 YQPDYGSFARKRPARSTQSSEKLAPDCAGLDFFAIDPSLQQLLSVY--VPGAELEYFRPH 60 Query: 65 ------VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118 + ELA +A+ + P LHA GE D +E+HPA+ + H + Sbjct: 61 FERMGKLAGGRLNELAMVADKHGPVLHARSRWGEDEDWIEYHPAYQEME--------HIA 112 Query: 119 IWDRSFEPVVRKQAHKIRAARL---------YLMAQLEAGHLMSPSVTSAS--MVALMTT 167 F + + A L YL Q E G + SVT S ++ + Sbjct: 113 FEQFQFHAMTHRPGAMGYAGTLSPITKYVFQYLFVQSEFGQMCPISVTDTSIHLIRKFGS 172 Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 + P++ + K +TEK GG+D+ + + ++I DG + Sbjct: 173 EALQARLLPRMLADNLQDLWKGTQ---------FMTEKSGGSDVGQVETTARQI-DGQWH 222 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 L G KWF S +D ++LA+ EG + F +PR EDGS N RLK+K+G Sbjct: 223 LHGEKWFSSHVDADIALILARPEGAPAGTRGLALFAMPRYREDGSRNSYRIVRLKDKLGT 282 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEA 335 RS A+ EL F +L+GD P +D+K ++ L A+ + + MR L E+ Sbjct: 283 RSMASGELRIDGAFAYLVGD------PTQDIKQMMEQVNLSRLSHAVRAAAMMRRCLNES 336 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYAR 394 + AR R G ++D P+M+R + + + AA ++ A++ +A + A R Sbjct: 337 MQAARHRQAFGRQVVDYPLMQRQLLKLLVPTEAALTMTMATADAMAKAYGGDAQCKAALR 396 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ P+ K C+ V AME GG+GYIE+ AR R++ + G+ N LD Sbjct: 397 LLTPLLKLRACRDNVTVATGAMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDA 456 Query: 455 LN 456 + Sbjct: 457 IE 458 >gi|33599969|ref|NP_887529.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567567|emb|CAE31480.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 615 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 127/476 (26%), Positives = 206/476 (43%), Gaps = 55/476 (11%) Query: 16 HQPSDSLFALNQP-----------PLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEY 64 +QP FA +P P G++ ++ D L L++ + V ELE + Sbjct: 3 YQPDYGSFARKRPARSTQSSEKLAPDCAGLDFFAIDPSLQQLLSVY--VPGAELEYFRPH 60 Query: 65 ------VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCS 118 + ELA +A+ + P LHA GE D +E+HPA+ + H + Sbjct: 61 FERMGKLAGGRLNELAMVADKHGPVLHARSRWGEDEDWIEYHPAYQEME--------HIA 112 Query: 119 IWDRSFEPVVRKQAHKIRAARL---------YLMAQLEAGHLMSPSVTSAS--MVALMTT 167 F + + A L YL Q E G + SVT S ++ + Sbjct: 113 FEQFQFHAMTHRPGAMGYAGTLSPVTKYVFQYLFVQSEFGQMCPISVTDTSIHLIRKFGS 172 Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 + P++ + K +TEK GG+D+ + + ++I DG + Sbjct: 173 EALQARLLPRMLADNLQDLWKGTQ---------FMTEKSGGSDVGQVETTARQI-DGQWH 222 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 L G KWF S +D ++LA+ EG + F +PR EDGS N RLK+K+G Sbjct: 223 LHGEKWFSSHVDADIALILARPEGAPAGTRGLALFAMPRYREDGSRNSYRIVRLKDKLGT 282 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 RS A+ EL F +L+GD + + L L A+ + + MR L E++ AR Sbjct: 283 RSMASGELRIDGAFAYLVGDPTQGIKQMMEQVNLSRLSHAVRAAAMMRRCLNESMQAARH 342 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-AAYARIMAPIT 400 R G ++D P+M+R + + + AA ++ A++ +A + A R++ P+ Sbjct: 343 RQAFGRQVVDYPLMQRQLLKLLVPTEAALTMTMATADAMAKAYGGDAQCKAALRLLTPLL 402 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K C+ V AME GG+GYIE+ AR R++ + G+ N LD + Sbjct: 403 KLRACRDNVTVATGAMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIE 458 >gi|66826751|ref|XP_646730.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4] gi|60474589|gb|EAL72526.1| hypothetical protein DDB_G0270352 [Dictyostelium discoideum AX4] Length = 628 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 66/516 (12%) Query: 26 NQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELE----LLGEYVLSCTAQELARMANYN 80 Q PL N Y D+ L+ AL P+ + KE+E GE V+ EL R + N Sbjct: 22 QQSPLL--GNQYIEDTQLIRALQRVLPAKILKEIEGDLTQFGERVVKDIL-ELGRASENN 78 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L Y G+R DK+ +W+ L +GL ++R ++ R + ++ Sbjct: 79 PPKLIQYDAWGKRIDKIVVDESWNKLKDIGCSEGLVSIGYERKYQEYSRIYQY----IKI 134 Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL A A MS + +A ++ L + +D SR DP KT Sbjct: 135 YLFACSSAVFDCPMSMTDGAARLIELYGDKGMKEDEYKHFISR--DP-------KTFWTS 185 Query: 199 GLGLTEKRGGTDIA-----AITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLAQ---- 248 G +TEK GG+D++ A++S DG C LSG+K+F S+ S+ ++LA+ Sbjct: 186 GQWMTEKTGGSDVSKSETIAVSSGS---GDGKTCNLSGYKYFTSATTSEGAMVLARDVDD 242 Query: 249 -------VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 VEG G + + +G + + +LKNK G ++ T ELE T + Sbjct: 243 AKTMKGAVEGSRGLSVYFIKLRKPNGELDRIQVHKLKNKFGTKAVPTAELELMGTPAVRV 302 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G + + + + + I S + MR +A +A RR V G +L D + + Sbjct: 303 GPKGRGVPVIASILNITRIHNVIHSAATMRRCVAIVRDFAHRRTVFGKLLKDNLLYLSTL 362 Query: 360 ADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMA 408 A++ L+ A+ L + ++ S SEE RI+ P++K + K + Sbjct: 363 AEMELEFRASLHLLLDVTLLLGKSERIVEKQSSNSEEQKQIDLLLRIVTPLSKLYTAKQS 422 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 V +EA+E +GG+GY+E+ + R +R++ SI G+ N + +D+ L++ + + Sbjct: 423 VTVASEAIEALGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDIWRTLKEPLTI-KFY 481 Query: 469 FSTLEQDLGSSGK---------KVITILRDSISLCK 495 F ++E L + K KVI+++R+++ + Sbjct: 482 FQSIENRLIQANKLLNNDNNIQKVISVIREAMKTIR 517 >gi|126324967|ref|XP_001380314.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica] Length = 669 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 129/482 (26%), Positives = 206/482 (42%), Gaps = 54/482 (11%) Query: 23 FALNQPPLFIGMNAYSSDSLLVA-LIANFPSVV----HKELELLGEYVLSCTAQELARMA 77 F QP L N Y D+LL L + P V +++L+ G V S L + Sbjct: 83 FFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEANQDLQRFGARV-SGEILSLGQDC 138 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 P+L + G+R D + PAW L S +GL ++R R +A Sbjct: 139 EAMPPRLQQFDAWGKRVDLILTCPAWKKLKGISAEEGLIAIAYERKHSNWSRV----YQA 194 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+L++ + S + T P D A K+ E ++ P + S Sbjct: 195 AKLFMFS---------------SSSGMFTCPLAMTDGATKVL--EVMKSSGPPGEAFSHL 237 Query: 198 I----------GLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIML 246 I G +TE++GG+D+A T K DG Y L G KWF S+ +D + L Sbjct: 238 ISRDPKLFWTSGQWMTERKGGSDVAHGTETVACKQDDGTYKLYGFKWFTSATDADMTMAL 297 Query: 247 AQV---EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 A++ +G V F + E G NGL QRLK K+G T EL Sbjct: 298 ARIMDAQGSVTKGTQGLSLFFLKLRDEQGQLNGLEVQRLKEKLGTHQLPTAELLLDGAQA 357 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+ + +M + + ++I +V MR + A YA +R V G + D P+ Sbjct: 358 HLVSQEGRGVATIANMLNVTRIYNSIGAVGSMRRMVFMARDYATQRFVFGKFIKDHPLHT 417 Query: 357 RAIADIALDIAAATALSFRLAN--SFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +A + + + L L +E + ++++ R++A + K + K A A+++ Sbjct: 418 QTLARMEVQVRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVS 477 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 E +EC GG GY+E+ ++ R+S +I G+ N + LD L +L K Q FS Sbjct: 478 EGLECFGGQGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASV 537 Query: 474 QD 475 QD Sbjct: 538 QD 539 >gi|162454035|ref|YP_001616402.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] gi|161164617|emb|CAN95922.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 562 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 125/459 (27%), Positives = 203/459 (44%), Gaps = 33/459 (7%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ-ELARM 76 A Q P +G N Y D +L + +A + + L +GE Q +LA Sbjct: 1 MAFYQDPPTLG-NQYDDDRVLRSYLARALPREVAASITPSLREMGELAGGRLYQLQLADR 59 Query: 77 ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR 136 AN P+L ++ G R D VE W R + G+ + ++R+ R H+ Sbjct: 60 AN--EPKLTSWDAWGRRIDHVEVTELWKEAARIACERGVVATAYERAHGAFSR--VHQFA 115 Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTP-RVHKDWA-PKIFSREYDPTNKAPMQKT 194 A YL + ++T + L+ + R D A P++ SR DP Sbjct: 116 LA--YLFDASSDVYTCPLAMTDGAARTLLASDNRALIDRAVPRLTSR--DPA-------A 164 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252 + G +TE+ GG+D+ + + DG Y L G KWF SS S+ + LA+ EG Sbjct: 165 AWTSGQWMTERTGGSDVGRSETAARLGPDGAYRLHGTKWFASSTTSEMALTLARPEGNPE 224 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + F V E G G+ RLK+K+G R T EL + L+ Sbjct: 225 GSRGLALFYVELAGEAGRREGVLINRLKDKLGTRKVPTAELTLDGVLATPVAGLSNGVRA 284 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M + +AI +++GMR LA A YA+ R G L ++P+ +A++ + Sbjct: 285 IAPMLNVTRTWNAIGAIAGMRRGLALARSYAQSRVQFGTTLAEKPLHMDTLAELQAEFEG 344 Query: 369 ATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A L+FR ++ S EA R++ P+ K K A +V++E +E GG+GY+ Sbjct: 345 AFHLTFRAIELLGREETGSLTDSEAKLLRLIIPLAKLTTAKQAVSVLSEVLEAFGGAGYV 404 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E+ + R R++ +I G+ N + LD L ++ K +L Sbjct: 405 EDTGLPRLLRDAQVLTIWEGTTNVLALDALRVILKDGSL 443 >gi|302562000|ref|ZP_07314342.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302479618|gb|EFL42711.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 215 Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMA 408 +DQP+M+ +AD+AL+ AAT L+ RLA + D A + + EAA+ RI + KYW K Sbjct: 1 MDQPLMRNVLADLALESEAATTLTLRLAGAADRAVRGDAGEAAFRRIATAVGKYWVTKRG 60 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 PA AEA+EC+GG+GY+E+ + RHYRE+P SI GSGN LDVL L + T + L Sbjct: 61 PAFTAEALECLGGNGYVEDSGMPRHYREAPLLSIWEGSGNVNALDVLRALGRDTATAQAL 120 Query: 469 FSTLEQDLGSSGK--KVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIA 526 F L G+ + + L+D L + + AR L E++AL + L R ++ Sbjct: 121 FDELALTRGADARLDAAVAGLKD--QLAEGSQAGARRLVERMALTLQGSLLVRHAPPAVS 178 Query: 527 DVFLENRF 534 D F R Sbjct: 179 DAFCATRL 186 >gi|229541648|ref|ZP_04430708.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229326068|gb|EEN91743.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 552 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 124/449 (27%), Positives = 205/449 (45%), Gaps = 38/449 (8%) Query: 34 MNAYSSDSLLVALIAN-----FPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88 MN Y D L L+ F KEL GE + P+L Y Sbjct: 1 MNFYHDDPNLARLLKQYLDPLFFDWAEKELAEFGEMCAGEIDERATHTDREGQPKLIKYN 60 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYLM 143 GE +V + + + + + G+ H I P + ++ + + A A+ YL+ Sbjct: 61 RYGEDVSRVWVNEGYFKTVEQVYNKGIVGYVHKPI------PALGQKGNYVYAFAQGYLL 114 Query: 144 AQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 +Q E G ++T+A+ L + + + + P++ S T +A + + Sbjct: 115 SQSELGFYCPVTLTAAASYLLDHYGSHELKQTYLPQLIS-----TGEAERYEGATF---- 165 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VG 254 LTE++GG+D+ A ++ DG Y L G K+F S+ M ++LA+ EG + Sbjct: 166 LTERQGGSDVGANETKAVS-EDGCYRLYGEKYFASNVGMCGVAMVLARREGAPSGTKGLS 224 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP E+G NG+ +RLK+K+G R+ + E+ F +L+GD + + Sbjct: 225 LFLVPWEKENGEKNGIYIRRLKDKLGVRAVPSGEVVFDGAKAYLVGDPRKGFYYMMEALN 284 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L + +A+ S+ MR + EA YA RR G L D P++K + +A T+ F Sbjct: 285 LSRICNAVASIGIMRRAYREARAYALRRTAFGSRLADYPMVKETLVKMAAKQEVETSAVF 344 Query: 375 RLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 RLA FD K+ +E AR++ I K + A EA+E GG+GYIE+ Sbjct: 345 RLATLFDRTASGKADEKENIMARLLIAILKMETAEQAIHFAHEAIEMHGGNGYIEDFVTP 404 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ ++ G+ N + L+VL L+ K Sbjct: 405 RLLRDAQVLTVWEGTANILGLEVLRLMRK 433 >gi|332973175|gb|EGK11110.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 604 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 37/458 (8%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYN 80 N P + N Y D L L+ + P+ +H +EL LG V Q A Sbjct: 20 NIPRPTVEPNFYLEDFNLQYLMRRYLPASMHQWADRELTHLGARVAGPIDQRAAYTDGEG 79 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P+L Y GE ++ + + ++ G+ ++ R + RK + + Sbjct: 80 QPRLVRYNRRGEEISQIVKNEGYLKTVKEVYGAGIVGYLY-REVPELGRKAPYLYSYLQG 138 Query: 141 YLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL+++ E G ++ ++++A ++ TP + + + S + ++T Sbjct: 139 YLLSESEPGFYCPVTLTLSAAHLIDRYGTPAQKETYLTGLTSLD---------EETLYEG 189 Query: 199 GLGLTEKRGGTDIAA---ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-- 253 LTE++GG+D+ A + + + G+Y L+G K+F S+A M+A V R+ Sbjct: 190 ATWLTERQGGSDVGANLTVATADPEAGPGVYRLTGEKFF----ASNAGAMVATVLARIHP 245 Query: 254 --------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G FLVP + DG+ N + +RLK K+G + + E+ G+L+GD + Sbjct: 246 DRPGTRGLGLFLVPWIKPDGTRNRIYVRRLKEKLGVNAVPSAEVILEEAEGYLIGDPDQG 305 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + + + +A+ + MR + EA HYAR RH G ++ ++K+ +A++ ++ Sbjct: 306 FKYMAEALNISRICNAVAATGIMRRAWYEAFHYARERHAFGRPILQYSMVKQTLAEMLME 365 Query: 366 IAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + T +F + + FD+ S E+ AR++ + KY + A + +A+E +GG+ Sbjct: 366 LEVNTGSTFDMIHLFDKVNSGQAAPEKEVMARMLISLLKYRTGEAAKEMTHQAIETLGGN 425 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GYIEE R R++ ++ G+ N + LD+ ++ K Sbjct: 426 GYIEEYVTPRLLRDAQVLTVWEGTANILALDLWRVIRK 463 >gi|332083187|gb|EGI88418.1| protein aidB domain protein [Shigella boydii 5216-82] Length = 259 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 D A+ S + MR + + AI++A +RHV G LI QP+M+ ++ +AL + TAL FRLA Sbjct: 4 FDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLA 63 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++D ++ ++EA +AR+ P K+ CK +AEAME +GG GY EE + R YRE Sbjct: 64 RAWDR-RADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREM 122 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497 P NSI GSGN M LDVL +L K +++ L + G + R L K Sbjct: 123 PVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPA 182 Query: 498 KGLARFLTEKIALASSAAALYRAGMNDIADVFLE 531 + L R +T ++ L A + + +A + + Sbjct: 183 EELGREITHQLFLLGCGAQMLKYASPPMAQAWCQ 216 >gi|319763877|ref|YP_004127814.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317118438|gb|ADV00927.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 612 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 34/402 (8%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWH-----ALLRRSIHDGLH---CSIWDRS 123 ELA +A+ + P LHA GE D VE+HPA+ A + H H + + Sbjct: 74 ELATVADKHGPVLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGT 133 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPKIFSR 181 PV + A YL Q E G + SVT S ++ + + ++ + Sbjct: 134 LSPVTKY-------AFQYLFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLQRMLAE 186 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 + + K +TEK GG+D+ + + + I DG + L G KWF S +D Sbjct: 187 KLEDLWKGTQ---------FMTEKAGGSDVGQVETTARLI-DGQWHLFGEKWFSSHVDAD 236 Query: 242 AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 ++LA+ E + F +PR EDGS N RLK+K+G RS A+ EL F Sbjct: 237 VALILARPENAPAGTRGLALFAMPRQREDGSRNSYRIVRLKDKLGTRSMASGELRIEGAF 296 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +L+GD + + L L A+ + + MR L EA+ A RH G ++D P+M Sbjct: 297 AYLVGDPTRGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRVMDYPLM 356 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAE 414 +R + I + AA +++ A+ + + ++AA A R++ P+ K C+ V Sbjct: 357 QRQLLKIMVPTEAALSVTLATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATG 416 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 AME GG+GYIE+ AR R++ + G+ N LD + Sbjct: 417 AMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIG 458 >gi|126324963|ref|XP_001380274.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica] Length = 633 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 129/480 (26%), Positives = 201/480 (41%), Gaps = 50/480 (10%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIANF--PSV---VHKELELLGEYVLSCTAQELARMA 77 F QP L N Y D+LL + P V V+++L+ G V S L + Sbjct: 47 FFQGQPSL---GNQYLEDALLRGYLKRHLPPQVFAEVNQDLQRFGARV-SGEILSLGQEC 102 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 P+L + G+R D + AW L R S +GL ++R + Sbjct: 103 EAMPPRLQHFDGWGQRVDHILTCSAWKKLKRISAEEGLIAIGYERKYS----------NW 152 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS--REYDPTNKAPMQKTS 195 +R+Y A+L + PS + + P D A K+ + P +A TS Sbjct: 153 SRVYQAAKL---FMFCPSS------GMFSCPLAMTDGATKVLEVMKSSGPPGEAFSHLTS 203 Query: 196 ------VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 G +TE++GG+D+A T K DG Y L G KWF S+ +D + LA+ Sbjct: 204 RDPKLFWTSGQWMTERKGGSDVAHGTETVACKQDDGTYKLFGFKWFTSATDADMTLALAR 263 Query: 249 V---EGRV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 + +G V F + E G NGL QRLK K+G T EL L Sbjct: 264 IMDAQGSVTKGTQGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHL 323 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + + +M + + ++I +V MR + A YA +R V G + D P+ + Sbjct: 324 VSQEGRGVATIANMLNITRIYNSISAVGYMRRIVFMARDYATQRFVFGKFIKDHPLHTQT 383 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEA 415 +A + + + L L+ S + + +S R + PI A A+++E Sbjct: 384 LARMEVQVRGGFLLVMELSRSLGKWRLQSSAQKIRGIFRGLTPIAGQTLSSQAVAIVSEG 443 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 +EC GG GY+E+ ++ R+S +I G+ N + LD L +L K Q FS QD Sbjct: 444 LECFGGQGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQD 503 >gi|322370195|ref|ZP_08044757.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus DX253] gi|320550531|gb|EFW92183.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus DX253] Length = 568 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 128/448 (28%), Positives = 206/448 (45%), Gaps = 37/448 (8%) Query: 33 GMNAYSSDSLLVALIA-NFPSVVHKELELLGEY--VLSCTAQELARMANYNTPQLHAYGP 89 GMN + D +L + +P E E+ ++ T + + + P+L Y Sbjct: 13 GMNYWQYDPVLQHEVERTYPGDRGWAEERFDEFGAIVGTTVAPNSDTIDEHGPELRQYDR 72 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFE--PVVRKQAHKIRAARL-YLMAQL 146 G + +E+HPA L + G I SF P A + + YL+A Sbjct: 73 HGRLVNDIEYHPA--QLENEELVYG--AGIVADSFRAPPDRDDPASMLHHLTMDYLLAYA 128 Query: 147 EAGHLMSPSVTSASMVALMTTPRVH------KDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + G L P +A VAL+ H ++ ++ +REYD + M Sbjct: 129 DVG-LTCPVAMTAG-VALVLERFDHGSDGSLSEFFDRLTAREYDDLLQGAMF-------- 178 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC- 255 LTE++GG+D+ A + ++ DG + L+G KWF S+ S A + LA+ +G G Sbjct: 179 -LTERQGGSDVGATETVAERTDDG-WELTGEKWFCSNVDSGAILTLARTPDAPDGTEGLS 236 Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP +G +G +RLK+K+G S T E+EF L+G+L + +M Sbjct: 237 LFLVPGTTSNGERDGAFVRRLKDKLGTVSVPTGEVEFRGAEAHLVGELESGFRYMSEMLN 296 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L + +A S + +L E+ A R G + P+M+R + ++A+ AATA +F Sbjct: 297 LERIANAFASCGLIGRALLESKVRAANREAFGSTIDRYPLMRRDLVEMAVAHEAATAFTF 356 Query: 375 RLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +FD R +E A+A R++ PI K +MA V + AME GG+GY+ + R Sbjct: 357 DAGRAFDR-YHRGDEDAFALMRLLVPIAKSRTGRMAVDVASYAMEIHGGNGYVNDFVTNR 415 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 R++ I G+ N + LDVL L + Sbjct: 416 LLRDAQVLPIWEGTSNILSLDVLRALAR 443 >gi|288556197|ref|YP_003428132.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288547357|gb|ADC51240.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 556 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 121/509 (23%), Positives = 233/509 (45%), Gaps = 44/509 (8%) Query: 34 MNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88 MN Y +D +L ++ + + K+LE GE + + P+L Y Sbjct: 1 MNFYQNDPVLKKILKTHLDSRMFNWADKQLESFGEMCGTVIDERAKHTDREGQPKLVKYN 60 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GE + + + +R + G+ + + + K + A+ YL++Q E Sbjct: 61 QFGEDISHIWVNEGYKQTVRETYQTGIVGYV-HKKIPELNTKGNYMYSYAQGYLLSQSEP 119 Query: 149 GHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G ++ S+ +A ++ V + + P + S T + + + + LTE++ Sbjct: 120 GFYCPVTLSMATALLLEKYANEDVKERFLPHVLS-----TGETELYEGATF----LTERQ 170 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVP 259 GG+D+ A K D Y +SG K+F S+ + ++LA+ +G + F VP Sbjct: 171 GGSDVGANEVAAVKNGDH-YLISGEKYFASNAGVCGVAMVLARGDGSSSGTKGLSLFAVP 229 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 LE G NG+ +RLK+K+G R+ + E+EF+N +L+GD + + + L + Sbjct: 230 WRLEGGELNGISIRRLKDKLGVRAVPSAEVEFTNAKAYLVGDESKGIYYMMEALNLSRIC 289 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 +A+ S+ MR + EA+ YA +R LID P+++ ++ + + T F L Sbjct: 290 NAVASIGIMRRAYQEALRYAFKREAFKKQLIDYPMVQESLLALCVKHEIETVAIFDLIKE 349 Query: 380 FD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +D + + E+AAY R++ I K + A EA+E +GG+GYIE+ + Sbjct: 350 YDLLMNDDQKDQKDHEQAAYVRLLIAILKKETAEQAIHFSHEAIELLGGNGYIEDFVTPK 409 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL-----------FSTLEQDLGSSGK 481 R++ ++ G+ N + L++L L++K T++ +Q EQ+ K Sbjct: 410 LLRDAQVLTVWEGTANILGLELLRLMKK-THVHKQFSKRIKAFVESDLKQFEQEKEILSK 468 Query: 482 KVITILRDSISLCKEDKGLARFLTEKIAL 510 ++ + R + + + D+ + +KIA+ Sbjct: 469 ELHALNRMTTYIERADEETQTYYAKKIAV 497 >gi|126324965|ref|XP_001380303.1| PREDICTED: similar to LOC446287 protein [Monodelphis domestica] Length = 781 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 209/474 (44%), Gaps = 38/474 (8%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIA-NFPSVV----HKELELLGEYVLSCTAQELARMA 77 F QP L N Y D+LL + + P + +++L+ G V S L + Sbjct: 195 FFQGQPSL---GNQYLEDALLRGYLKRHLPPKIFAEANQDLQKFGARV-SGEILSLGQEC 250 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 P L + ++ D + PAW L R S +GL ++R + R +A Sbjct: 251 EAMPPTLQNFDARVKQVDLILTCPAWKKLKRISAEEGLIAIAYERKYSNWSRV----YQA 306 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP--KIFSREYDPTNKAPMQKTS 195 A+L++ + +G + P + ++ V K P + FS T++ P K Sbjct: 307 AKLFMFSS-SSGMFICPLAMTDGATKVL---EVMKSSGPPGEAFSHL---TSRDP--KLF 357 Query: 196 VAIGLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EG 251 G +TE +GG+D+A T K DG Y L G KWF S+ +D + LA++ +G Sbjct: 358 WTSGQWMTEHKGGSDVAHGTETVACKQVDGSYKLFGFKWFTSATDADMTMALARIMDAQG 417 Query: 252 RV-------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 V F + E G NGL QRLK K+G T EL L+ + Sbjct: 418 SVTKGTHGLSLFFLKLRDEQGELNGLEVQRLKEKLGTHQLPTAELLLDGARAHLVSQVGR 477 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M + + ++I +V MR + A YA +R V G + D P+ + +A + + Sbjct: 478 GVATIANMLNVTRIYNSIGAVGSMRRIVFMARDYATQRFVFGKFIKDHPLHTQTLARMEV 537 Query: 365 DIAAATALSFRLAN--SFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + L L +E + ++++ R++A + K + K A A+++E +EC GG Sbjct: 538 QVRGGFLLVMELVKLLGLEETNMATTQDSHLLRLLASVAKLYTGKQAVAIVSEGLECFGG 597 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 GY+E+ ++ R+S +I G+ N + LD L +L K Q FS QD Sbjct: 598 QGYMEDTNLPVLLRDSQVLTIWEGTTNVLALDTLQVLAKSQGQVLQAFSASVQD 651 >gi|290992490|ref|XP_002678867.1| predicted protein [Naegleria gruberi] gi|284092481|gb|EFC46123.1| predicted protein [Naegleria gruberi] Length = 594 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/427 (26%), Positives = 193/427 (45%), Gaps = 44/427 (10%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 + K+L G+ V S T + + +A N P+L Y R D++E H +W L S + Sbjct: 49 IMKDLTAFGDKV-SSTIWKWSDLAERNEPKLIHYDAWHNRVDRIEMHSSWKELYDTSARE 107 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172 GL ++R + R AR+Y A+L +L PS A+ T P Sbjct: 108 GLIALGYERD----------RFRQFARVYQFAKL---YLYDPSC------AVQTCPLSMG 148 Query: 173 DWAPKIFSREYDP---------TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223 D A K+ + + T++ P Q + +TEK GG+D++ + ++ D Sbjct: 149 DGASKLLETKREQLMIECRQHLTSRDPEQFWTS--NQWMTEKSGGSDVSGCETIATQVKD 206 Query: 224 GIYCLSGHKWFLSSPMSDAFIM-------LAQVEGRVGCFLVPRLLEDGSP-NGLCYQRL 275 Y L+G KWF SS + A ++ +V+ +V FL+ E G NGL + + Sbjct: 207 FDYLLNGFKWFGSSDSAMALLLAKIKDEKTGKVDDKVSLFLLKTKDETGQNWNGLLFHKF 266 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 KNK+G ++ T E+E N L+ + M + + ++I +V+ MR ++ A Sbjct: 267 KNKLGTKAMPTSEIELKNAKATLISPRGQGVKFIATMINVTRIYNSICAVAKMRRAVNIA 326 Query: 336 IHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAA 391 +A +R V+ G IL + R ++ + + + R+ + + E Sbjct: 327 QDFASKRIVNKGQILAHNTLHLRWLSKMVAETTGSLHFVMDCVRILGKEECGIANQNERQ 386 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 R+ PI K + K + V++E +E +GG GY E+ + R R++ SI G+ N + Sbjct: 387 ILRLCIPIIKLYTGKKSLQVVSEGLEMLGGVGYTEDSGMPRLLRDAQVLSIWEGTTNILS 446 Query: 452 LDVLNLL 458 LDVL +L Sbjct: 447 LDVLRVL 453 >gi|311106641|ref|YP_003979494.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310761330|gb|ADP16779.1| acyl-CoA dehydrogenase, middle domain protein 8 [Achromobacter xylosoxidans A8] Length = 597 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 135/477 (28%), Positives = 213/477 (44%), Gaps = 60/477 (12%) Query: 29 PLFIGMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTPQ 83 P G + Y+ D L L+ + P H +L + +G+ + LA +A+ P Sbjct: 27 PDCAGQDFYALDRGLQDLLRLYVPEAAHAKLLPQFQRMGQ-LAGGRLNALATVADKFPPV 85 Query: 84 LHAYGPGGERWDKVEFHPAW-------------HALLRRSIHDGLHCSIWDRSFEPVVRK 130 LH GE D +E+HPA+ HA+ R+ L C D PV + Sbjct: 86 LHPRTRWGEDEDWIEYHPAYQEMEHIAFADFQFHAMSHRA--GVLGC---DAPLPPVAKY 140 Query: 131 QAHKIRAARLYLMAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 A YL Q E G + +S S TS ++ +P + + P++ S + D K Sbjct: 141 -------ALQYLFVQAEFGQMCPISVSDTSIHLIRKFGSPALQEKLLPRMLSSDPDTLWK 193 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 +TEK GG+D+ A+ + +++ DG + L G KWF S +D ++LA+ Sbjct: 194 GTQ---------FMTEKAGGSDVGALETVARQV-DGTWRLHGEKWFCSHTDADVALLLAR 243 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 EG + F +PR LEDGS N RLK+K+G RS A+ E+ +L+G + Sbjct: 244 PEGAPAGTRGLALFAMPRRLEDGSRNAYRIVRLKDKLGTRSMASGEIRLEGAQAYLVGQV 303 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI--- 359 + + + L L + + + MR L EA+ AR RH G ++ P+++R + Sbjct: 304 DQGLKHMMEQVNLSRLSHGVRAAAMMRRCLNEAMLAARHRHAFGRDVMAYPLLRRQLLKL 363 Query: 360 ---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + AL + ATA R A D A A R++ P+ K C+ +V AM Sbjct: 364 LTPTEAALSMVMATADIMRRAQEGDTAA-----APVLRLLTPLLKLRTCRDNVSVATGAM 418 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 E GG+GYIE+ AR R++ + G+ N LD + + E L + LE Sbjct: 419 EVRGGNGYIEDFINARLVRDAHIGVLWEGTSNINALDAIQRAVRKERAHEALSALLE 475 >gi|262195083|ref|YP_003266292.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262078430|gb|ACY14399.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 557 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 127/479 (26%), Positives = 208/479 (43%), Gaps = 53/479 (11%) Query: 25 LNQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARMANY 79 QPP N Y D L L A + V EL LGE LS ++A+ Sbjct: 4 FQQPPAL--GNQYDDDFFLQDYLARTLPAEVLAAVEDELRELGE--LSGGHFYRMQLADA 59 Query: 80 NTPQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 +H + G+R D++E P W + GL + +D + R A Sbjct: 60 RNEPVHVPWDAWGQRVDRIEVSPLWREAQALAAERGLVAAAYD----------SPHGRFA 109 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP----------TNK 188 R++ Q ++++PS+ + + P D A + + T++ Sbjct: 110 RVH---QFALNYVIAPSLD------VYSCPLAMTDGAARTLLSSGNQALIEHAVTRLTSR 160 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P Q + G +TE+ GG+D+ ++ ++ D + L G KWF S+ S + L + Sbjct: 161 DPAQAWTS--GQWMTERTGGSDVGLSETEARRDGD-TWRLWGTKWFTSATTSQMALTLGR 217 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD- 301 +G + F V +DG + RLK+K+G R T EL + T L+ + Sbjct: 218 PDGNGPGGRGLALFYVELRDDDGRLRNIEVNRLKDKLGTRKVPTAELTLAGTPATLVTEE 277 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + + M + +AI++ S MR LA A YA+RR G L ++P+ +AD Sbjct: 278 AHNGVRSITPMLNITRTWNAIIATSLMRRGLALAKDYAQRRRAFGARLAEKPLHLDTLAD 337 Query: 362 IALDIAAATALSFRLA---NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + + A A L+FR A S + ++ +AA AR++ PI K K A V +EA+E Sbjct: 338 MQAETAGAVLLAFRAAELLGSLESGEATDSDAALARVLTPIAKLSTGKQAVTVTSEALES 397 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG+GY+E+ + R ++ I G+ N + LD L L + + F L E+ LG Sbjct: 398 FGGAGYVEDTGLPRLLADAQVLPIWEGTTNVLSLDTLRALGQ-EDGFRALQGECERLLG 455 >gi|268317756|ref|YP_003291475.1| acyl-CoA dehydrogenase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335290|gb|ACY49087.1| acyl-CoA dehydrogenase domain protein [Rhodothermus marinus DSM 4252] Length = 558 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 209/472 (44%), Gaps = 32/472 (6%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELELLGEYVLSCTAQEL--ARMANYNT 81 + +PP N Y +DSLL +A P+ V +E+E + + + L ++ + + Sbjct: 3 VQEPPRLD--NTYEADSLLRGYLARALPAEVLREIEPELQELGTLAGGPLYHLQLEDRTS 60 Query: 82 PQLH-AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D++ W ++ GL + +++ + R H+ A++ Sbjct: 61 EPVHIPWSAWGERIDEIRLTRVWQEAEPLAVRFGLVATAYEQRYGAFSR--IHQF--AKV 116 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 YL A + ++T + L+ + R+ + P + SR N A T Sbjct: 117 YLFAPSTDIYACPLAMTDGAARTLLDSGNRRLIERALPHLTSR-----NPA----TFWTS 167 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 G +TE GG+D+ + + + DG + L G KWF+S+ S ++LA+ EG Sbjct: 168 GQWMTELTGGSDVGSSQTVARPEPDGTWHLYGRKWFVSAITSQMALILARPEGNPPGGRG 227 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F E G P G RLK+K+G R T E+ + L T + M Sbjct: 228 LALFYAELRDERGRPRGFQILRLKDKLGTRKLPTAEVLLEGLPAEPVAGLTHGTRTIAPM 287 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + +AI + + MR L A YARRR G L + P+ +A + + AAA L Sbjct: 288 LNVTRTWNAITAAALMRRGLLLARDYARRRVAFGRPLAEHPLHLDTLAGLQAETAAAFHL 347 Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +F L + ++ +E A R++ P+ K + A AV++E +E GG+GY+E+ Sbjct: 348 AFCVAELMGRVETDEASDDERALLRLLTPVAKLTTARQAVAVLSEVLEAFGGAGYVEDTG 407 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGSS 479 + R++ I G+ N + LDVL LE G + F QD+ S Sbjct: 408 LPVLLRDAQVLPIWEGTTNVLALDVLRALEDIGGLQPLHKAFDVWLQDVPES 459 >gi|254495593|ref|ZP_05108515.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12] gi|254355163|gb|EET13776.1| acyl-CoA dehydrogenase [Legionella drancourtii LLAP12] Length = 529 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 24/417 (5%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 + EL LG+ V+ Q L + A + P+ Y P G+R D++E AW+ L + S + Sbjct: 5 IEPELRHLGQRVIEDIHQ-LGQEAEASPPKHVPYDPWGKRIDQIEVPAAWNELDKISAEE 63 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD 173 L ++R + R H+ +LYL A + ++T + AL ++ D Sbjct: 64 KLIAIGYERRHGALSR--IHQF--VKLYLFHPSSAIYTCPLAMTDGAARAL----ELYAD 115 Query: 174 WAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 A K R + T+ P Q + G +TE+ GG+D++ T+ K + LSG K Sbjct: 116 EALK--KRAFSHLTSADPTQFWTS--GQWMTERTGGSDVSG-TATIAKPDGAQFRLSGVK 170 Query: 233 WFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 WF S+ S + LA +EG + F + +G+ NG+ RLK+K+G R+ T Sbjct: 171 WFTSATTSQIAMTLASIEGAPAGSKGLSLFYLELRDPNGALNGIRINRLKDKLGTRALPT 230 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 EL N L+G + + + + +A +V MR ++A A YA +R G Sbjct: 231 AELTLENASATLVGSAGDGVKKISSLFNITRIYNACCAVGYMRRAIALARDYANKRVAFG 290 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSF--DEAKSRSE-EAAYARIMAPITKYW 403 L + ++++ ++ AA L F DE +E E A R++ P+ K + Sbjct: 291 RPLSQHGLHLETLSNMQVEFTAAFHLVFHAVELLGKDELGEATESERAVLRLLTPLAKLY 350 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K A A+++EA+E GG+GYIE+ + + R + SI G+ N + LD L + + Sbjct: 351 TAKQAIALVSEALEAFGGAGYIEDTGLPQLLRNAQVLSIWEGTTNILSLDALRAIHR 407 >gi|156744093|ref|YP_001434222.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235421|gb|ABU60204.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 573 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 51/470 (10%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELELLGEYVLSCTA 70 M HQPS +L N Y+ D +L + + P V ++E + Sbjct: 15 MELFHQPSPTLG-----------NQYTDDRVLRSFLQRTLPRDVLAQVEPDMMAMGELAG 63 Query: 71 QELARM---ANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 EL R+ N P L + GER D +E P W R + GL ++R++ + Sbjct: 64 GELYRLHLADRLNEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGAL 123 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT- 186 R + Q +L PS + T P D A + + D Sbjct: 124 SR-------------VVQFALVYLFHPSTD------VYTCPLAMSDGAARTLVQAGDAAL 164 Query: 187 -NKAPMQKTS------VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 ++A + TS G +TE GG+D++ + + DG++ L G KWF S+ Sbjct: 165 IDRALPRLTSRDPDRCWTSGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATT 224 Query: 240 SDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + LA+ EG + F + E+G G+ RLK+K+G R T EL Sbjct: 225 GQMALALARPEGNPSGSRGLALFYIELRDEEGRLQGIRVNRLKDKLGTRKVPTAELSLEG 284 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 T L+G LN + M + + +++ +VS MR +A A YARRR L QP Sbjct: 285 TPARLVGALNGGVRAIVPMLQVTRIWNSVSAVSFMRRGIALARDYARRRVAFEAPLNRQP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAY-ARIMAPITKYWCCKMAPA 410 + +A + + A LSF A +EA + + + R++ ITK + A Sbjct: 345 LHTETLATLQAEFEGAFHLSFLTAGLLGAEEAGTADKRQQHLLRVLTSITKLTTGRQAVD 404 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V++E +E GG+GY+E+ + R++ I G+ N + LD L L + Sbjct: 405 VMSEVIEAFGGAGYVEDTGLPALLRDAHVLPIWEGTTNVLALDTLRALAQ 454 >gi|330805830|ref|XP_003290880.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum] gi|325078965|gb|EGC32589.1| hypothetical protein DICPUDRAFT_49513 [Dictyostelium purpureum] Length = 625 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 125/485 (25%), Positives = 216/485 (44%), Gaps = 50/485 (10%) Query: 27 QPPLFIGMNAYSSDSLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTP 82 Q PL +G LL AL P + + +L G+ V++ EL R + N P Sbjct: 22 QSPL-LGNQFLEDTELLKALKRVLPLEVLNEIKPDLTQFGDRVVN-DILELGRASENNPP 79 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L G R DK+ +W+ L +GL ++R ++ R + ++YL Sbjct: 80 KLLQLDAWGRRIDKIVVDESWNKLKDIGCKEGLVSIGYERKYKEFSRIYQY----IKIYL 135 Query: 143 MAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 A A S+T A ++ L T + KD +R DP+ G Sbjct: 136 FACSSAVFDCPLSMTDGGARLLELHGTDSMKKDELQHFITR--DPSQ-------FWTSGQ 186 Query: 201 GLTEKRGGTDIAAITSQGQKISDG-----------IYCLSGHKWFLSSPMSDAFIMLAQ- 248 +TEK GG+D++ + Q++++ + +SG+K+F S+ SD+ ++LA+ Sbjct: 187 WMTEKTGGSDVSGSETIAQELTNPSEYPKLLSTPPTHKVSGYKYFTSATTSDSSMILARD 246 Query: 249 --------VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 V G G +L+ +G + + +LKNK G ++ T ELE T Sbjct: 247 VDKDGNGGVSGSRGLSVYLIKLRTPNGELDRIRVHKLKNKFGTKAVPTAELELMGTPAVR 306 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +G + + + + + I SVS MR +A +A RR V G +L D + Sbjct: 307 IGPKGRGVPVIASILNITRIHNVIHSVSTMRRCIAIGRDFAHRRTVFGKLLKDNLLYLST 366 Query: 359 IADIALDIAAATALSFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAE 414 +A++ L+ A L F L S KS E + RI+ P++K + K + V +E Sbjct: 367 LAEMELEFRAG--LHFLLDVSLLLGKSECCATPETDSLLRILTPLSKLYTAKQSIWVSSE 424 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 +E +GG+GY+E+ + R +R++ SI G+ N + +DV L K T E F +++ Sbjct: 425 GIELLGGTGYMEDSDMPRLFRDTQVTSIWEGTTNVLSMDVWRSL-KNTKTIECFFKSIQD 483 Query: 475 DLGSS 479 + ++ Sbjct: 484 RVSNT 488 >gi|76802108|ref|YP_327116.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160] gi|76557973|emb|CAI49558.1| acyl-CoA dehydrogenase 7 [Natronomonas pharaonis DSM 2160] Length = 603 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 136/536 (25%), Positives = 236/536 (44%), Gaps = 73/536 (13%) Query: 59 ELLGEY--VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRS------ 110 E+L E+ VL + A + +L ++ GER ++VE+HP R + Sbjct: 44 EVLSEFGDVLGHRMADTADRIDKEGHELCSFDKFGERRNEVEYHPLIEEQERITYEEFGV 103 Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170 HD H EPV ++ L++ ++AG S+T+ + + L Sbjct: 104 THDAFHAPPG--RDEPVGLSHTLMMQT----LLSYVDAGFCCPVSMTTGAAIVLDKFDDG 157 Query: 171 H-KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS------- 222 + + +R+ D T + + LTE++GG+D+ A ++ + + Sbjct: 158 ELSSYFEGLTARDLD---------THIEGAMFLTEEQGGSDVGANETRAEPVEADDSVAA 208 Query: 223 -----DGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLC 271 D IY L G KWF S+ ++ + LA+ G + FLVPR DG N Sbjct: 209 ADIDRDRIYRLHGEKWFCSNIDAEGALALARTPGAPEGVDGLSLFLVPRTKPDGEVNEAH 268 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 ++RLK+K+G S T E++F +L+G+ + +M L +A ++ M Sbjct: 269 FRRLKDKLGTISVPTGEIQFEGAEAYLVGEEGRGFKYMSEMMNFERLTNATGALGVMGRG 328 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA- 390 L EA A +R G + + P+++R + D+++D AA A SF A + DE + + +++ Sbjct: 329 LLEAKVRAAQREAFGDAIDEYPLLRRDLVDMSVDYEAAAAFSFEAARTLDERERQGDDSD 388 Query: 391 AYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 AY R+ P+ KY +M+ + + AME +GG+GY+ E + R R++ I G N Sbjct: 389 AYQLMRLFIPVAKYKTARMSVDMSSYAMEILGGNGYVREHTTERLLRDAQVLPIWEGPSN 448 Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDL------------GSSGKKVITILRDSISLCKE 496 + LDVL + + E L L+ L G+ ++ + + SL E Sbjct: 449 ILALDVLRAFNR-EDAHEALVPYLQAKLDAVEHPALEPLAGTVEERFVELQNALASLATE 507 Query: 497 DKGLARFLTEKIA-----LASSAAALYRAGMNDIAD----------VFLENRFLDN 537 D A++ +++A + S A L A AD F+E RF D+ Sbjct: 508 DGDYAQYHAKRLADLVFDVVSGALLLEEAQEQIDADGNGRKALVATRFIETRFEDD 563 >gi|115712879|ref|XP_787606.2| PREDICTED: similar to LOC446287 protein, partial [Strongylocentrotus purpuratus] gi|115955109|ref|XP_001185668.1| PREDICTED: similar to LOC446287 protein, partial [Strongylocentrotus purpuratus] Length = 436 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 14/271 (5%) Query: 199 GLGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------- 249 G +TE+RGG+D+A T +DG + L G+KWF S+ SD + LA++ Sbjct: 27 GQWMTERRGGSDVAGGTETLAYPQNDGSFHLHGYKWFSSASDSDMTVALARIVDDDGQYK 86 Query: 250 EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 EG G F + +G NG+ Q+LKNK+G R T EL T L+ + Sbjct: 87 EGTRGLSLFYLETRTPEGKLNGIEIQQLKNKLGTRQLPTAELLLDGTKAHLVSEPGYGVA 146 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + M + +A M+V+ MR + A Y+ +R G +++D P+ + ++ + L+ Sbjct: 147 SISPMLTITRFHNATMAVAAMRRMVHYARDYSFQRRAFGKLIVDWPLHVQTLSRMELETR 206 Query: 368 AATALSFRLANSF--DEAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A AL A+ DEAK SE+ R++ P+ K + K A +V +E +E IGG GY Sbjct: 207 GAMALLLECAHLLGKDEAKEGSEDDLNLLRLLIPVLKLYTGKQAVSVASEGLESIGGQGY 266 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455 IE+ R++ SI G+ N + LD+L Sbjct: 267 IEDTGFPGILRDAQVLSIWEGTTNILSLDIL 297 >gi|108757033|ref|YP_632158.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108460913|gb|ABF86098.1| putative acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 553 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 129/480 (26%), Positives = 206/480 (42%), Gaps = 55/480 (11%) Query: 27 QPPLFIGMNAYSSDSLLVALIA-NFPSVVHKEL--------ELLGEYVLSCTAQELARMA 77 Q P +G N Y D+LL + +A P + + L EL G+Y ++ Sbjct: 5 QDPPRLG-NQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRD----- 58 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P+L + G+R D +E P W + GL + +++ K A R Sbjct: 59 RLNEPELTQWDAWGQRVDHIEVSPLWKEAESLAARRGLVATAYEQ-------KNAELSRV 111 Query: 138 ARLYLMAQLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 + L ++A L + S++ L T + + P + SR DP Sbjct: 112 HQFILNYLVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRA-LPHLTSR--DPA----- 163 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 T+ G +TE+ GG+D+ + ++ +G + LSG KWF S+ + + LA+ EG Sbjct: 164 --TAWTSGQWMTERTGGSDVGLTQTVARQTPEG-WRLSGTKWFTSATTAQMALTLARPEG 220 Query: 252 R------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F V G NG+ RLK+K+G R T EL + L Sbjct: 221 NGPGGKGLALFYVETRDAAGRLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGL--- 277 Query: 306 TGPVEDMKILIYLD---SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 T + +M ++ + +A+ S MR +LA A YA+RR G L D+P+ +A + Sbjct: 278 TDGIRNMAWMLNVTRTWNAVGSAWAMRRALALARDYAQRRVQFGAKLADKPLHMDTLAGL 337 Query: 363 ALDIAAATALSFRLANSFD--EAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + A L+FR EAK+ +E E R++ P+ K + V +E E Sbjct: 338 EAEFQAGFLLAFRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAF 397 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GG+GY+E+ I R ++ SI G+ N + LD L L K L E F +E LG + Sbjct: 398 GGAGYVEDTGIPRIQADAQVLSIWEGTTNVLSLDTLRALAKEGAL-EAFFHEVEGRLGQT 456 >gi|226311186|ref|YP_002771080.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] gi|226094134|dbj|BAH42576.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] Length = 603 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 116/494 (23%), Positives = 232/494 (46%), Gaps = 37/494 (7%) Query: 28 PPLFIGMNAYSSDSLLVALIANF-PSVVH----KELELLGEYVLSCTAQELARMANYNTP 82 P + G N + +D L L+ + P+ +H ++L LG V + A P Sbjct: 20 PRMPQGENFFKADPNLNYLLERYLPASMHEWAKQQLSWLGAQVAGPIDERAAYTDREGKP 79 Query: 83 QLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYL 142 +L Y GE ++ + + + G+ ++ + + RK + YL Sbjct: 80 RLRKYNRLGEDISEIITNEGYKETVAEVYGAGIVSYLY-QDIPELGRKAPYSYSFFMGYL 138 Query: 143 MAQLEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG- 199 ++Q E G ++ S+++A ++ + + + + SR+ +T + G Sbjct: 139 VSQSEPGFYCPVTLSMSAAYLLDRYGSEEQKEQYLTGLTSRD----------RTRLYEGA 188 Query: 200 LGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 LTE++GG+D+ A + + ++ G+Y L+G K+F S+ + +LA+++ Sbjct: 189 TWLTERQGGSDVGANLTVAEPVAGRPGVYRLTGEKFFASNAGAFVATVLARIDEEKPGTK 248 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +G FLVP + D N + +RLK K+G + + E+ + G+L+G+ + + Sbjct: 249 GLGLFLVPWVKPDNERNHIQVRRLKEKLGVNAVPSAEILLNGAEGYLIGEPQNGFKYMAE 308 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + +AI S+ MR + EA +YA +R G + P++K + + LD +T Sbjct: 309 ALNLSRICNAIASIGIMRRAFYEARNYAEQRRAFGKPIDQYPMVKEMLVSLLLDTEVSTG 368 Query: 372 LSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 F + +D +S S E+ A AR++ P+ KY + A A+E GG+GYIEE Sbjct: 369 AVFDMIAVYDRLQSHSVSKEDNALARLLIPLLKYRTGEEAVKSTHTAIEIHGGNGYIEEY 428 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT--- 485 R R++ ++ G+ N + LD+L +++K + ++FS + ++ + K V + Sbjct: 429 VTPRLLRDAQVLTVWEGTSNILALDILRVMQKENS--HEVFSRMLRERIAGWKHVFSQPY 486 Query: 486 --ILRDSISLCKED 497 ++R +++ +E+ Sbjct: 487 AELIRTELAILEEN 500 >gi|115380414|ref|ZP_01467405.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Stigmatella aurantiaca DW4/3-1] gi|310821695|ref|YP_003954053.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115362575|gb|EAU61819.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Stigmatella aurantiaca DW4/3-1] gi|309394767|gb|ADO72226.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 552 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 195/460 (42%), Gaps = 59/460 (12%) Query: 35 NAYSSDSLLVALIA-NFPSVVHKEL--------ELLGEYVLSCTAQELARMANYNTPQLH 85 N Y DSLL +A P + + L EL G+Y + ++ N P+L Sbjct: 12 NQYDDDSLLQGYLARKLPEELRRSLTDTFRELGELSGQYFYAFQLRD-----RLNEPELT 66 Query: 86 AYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 + G R D+++ P W + GL A++ ++A L + Q Sbjct: 67 QWDAWGRRVDRIDVTPLWREAEVLTARHGLVAV-------------AYEQKSAELSRIHQ 113 Query: 146 LEAGHLMSPSV------------TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 +++ PS+ + ++++L T + + P + SR DP Sbjct: 114 FALNYVIQPSLDVYSCPLAMTDGAARTLLSLGNTALIDRA-LPHLTSR--DPAE------ 164 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR- 252 G +TE+ GG+D+ + ++ +G + L G KWF S+ + + LA+ EG Sbjct: 165 -FWTSGQWMTERTGGSDVGLTQTVARQTPEG-WRLYGTKWFTSATTAQMALTLARPEGNG 222 Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + F V DG NG+ RLK+K+G R T EL + L Sbjct: 223 PGGKGLALFYVETRQPDGFLNGILINRLKDKLGTRKVPTAELTLDGALAVPVAGLTDGIR 282 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + M + +A+ SV MR ++A A YA RR G L ++P+ +A + + Sbjct: 283 NMSSMLNVTRTWNAVASVWMMRRAMALARDYASRRVQFGAKLSEKPLHVDTLAGMEAEFE 342 Query: 368 AATALSFRLANSFD--EAKSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A L+FR A EAK +E+ R++ P+ K K A+ +EA+E GG+GY Sbjct: 343 GAFLLAFRAAELLGRMEAKVATEQDLQLQRLVTPLAKLTTGKQTVALTSEALESFGGAGY 402 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +E+ + R ++ SI G+ N + LD L L K L Sbjct: 403 VEDTGLPRMLADAQVLSIWEGTTNVLSLDALRALAKEGTL 442 >gi|170089285|ref|XP_001875865.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649125|gb|EDR13367.1| predicted protein [Laccaria bicolor S238N-H82] Length = 594 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 135/506 (26%), Positives = 231/506 (45%), Gaps = 57/506 (11%) Query: 27 QPPLFIGMNAYSSDSLLVALIA-NFPSVVHKELE-----LLGEYVLSCTAQELARMANYN 80 QP F N Y+SD +L L+ P V +++E L GE + S + L + Sbjct: 8 QPVPFQEENTYTSDPVLPDLLKRTLPPSVFQQIEPDLIRLGGEIITSI--RSLGDGNKIS 65 Query: 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 P L Y G R D ++ W L + +G+ ++R F K+ ++ Sbjct: 66 PPILTQYDQWGRRVDNLQTSEGWRDLKAVAQKEGIPGIFYERKF-----KEHSRVYGFAK 120 Query: 141 YLMAQLEAGHLMSP-SVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 +M + + P S+T SA ++ L+ TP + K P++ SR DP+ + Sbjct: 121 MMMMVGDTHEVFCPLSMTDGSARVIELIGTPEMKKKILPRLISR--DPS-------FAFT 171 Query: 198 IGLGLTEKRGGTDIAAITSQ----GQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV--- 249 G +TE+ GG+D++ + G+ S G Y L+G KWF S+ S+ + LA+ Sbjct: 172 SGQWMTERPGGSDVSRTETTAVDTGKSHSFGPKYSLNGFKWFSSATDSEVSVALARTGTA 231 Query: 250 -EGRVGC----------FLVPRLLEDGSP--NGLCYQRLKNKIGNRSNATVELEFSNTFG 296 +G G L R SP N + RLKNKIG + T EL ++T Sbjct: 232 EDGSRGLSLFLVPLRLPLLRERSDPPSSPVSNNIFVHRLKNKIGTHALPTAELTLTSTEA 291 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILIDQPV 354 +L+G+ N + + + L SA SV +R L+ A YA+ R + GG +L D P+ Sbjct: 292 YLMGEPNQGIKNITPVLNITRLWSAATSVGNLRKCLSIATAYAKVRSIKGGSQLLQDTPI 351 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYARIMAPITKYWCCKMAPAV 411 +A I L A T L+F + + +++ + ++E R++ P K + + A A Sbjct: 352 HVAQLASINLLYRALTHLTFGVISLLGKSECGVATTDELRRLRMLTPAAKAFAAEKACAG 411 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLF 465 + EAM +GG+GY+EE I R R++ I G+ + LD+ +E T+ Sbjct: 412 MEEAMAALGGAGYMEENGIGRSIRDALVEKIWEGTVVVLALDLARSAQDRESMESFTSWA 471 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSI 491 ++ S+ DL ++ + +L++++ Sbjct: 472 NRVISSAASDLQEIIQRPLDLLKNAL 497 >gi|94312720|ref|YP_585929.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93356572|gb|ABF10660.1| acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 596 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 120/440 (27%), Positives = 202/440 (45%), Gaps = 29/440 (6%) Query: 31 FIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90 F+ ++ D L + L A+ + + LE +G+ + LA +A+ + P LH Sbjct: 34 FLALDRGLQDMLRLYLPADAHAHLLPHLERMGK-LAGGRLNTLAIVADKHAPVLHVRTRW 92 Query: 91 GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF-----EPVVRKQAHKIRAARLYLMAQ 145 GE D +E+HPA+ + + D ++ R EP+ + + YL Q Sbjct: 93 GEDADWIEYHPAYQEMEHIAFGDFQFHAMSHRGGVLGWKEPLPAAAKYAFQ----YLFVQ 148 Query: 146 LEAGHL--MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 E G + +S S TS ++ + + + P++ S ++ M K + +T Sbjct: 149 AEFGQMCPISVSDTSIHLIRKYGSAALQEKLLPRLLS-----SDPGTMWKGTQF----MT 199 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV------GCFL 257 EK GG+D+ AI + ++ DG + L G KWF S +D ++LA+ EG V F Sbjct: 200 EKAGGSDVGAIETVARE-EDGEWRLYGEKWFCSHTDADIALLLARPEGAVDGTRGLALFA 258 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +PR L+DGS N RLK+K+G RS A+ E+ +L+GD + + L Sbjct: 259 LPRTLDDGSRNAYRIVRLKDKLGTRSMASGEIRLDGAVAYLVGDPTQGLKQMMEQVNLSR 318 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L A+ + + MR L EA+ AR R G ++ +++R + + + AA ++ A Sbjct: 319 LSHAVRAAAMMRRCLNEALVAARHRRAFGREVVGHALLRRQLLKVMVPTEAALSMVMATA 378 Query: 378 NSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + A K A R++ P+ K C+ V AME GG+GYIE+ AR R+ Sbjct: 379 DIMARAGKGDKTAALALRLLTPLLKLRTCRDNIEVATGAMEVRGGNGYIEDFVNARLVRD 438 Query: 437 SPANSILLGSGNAMVLDVLN 456 + + G+ N LD + Sbjct: 439 AHIGVLWEGTSNINALDAIQ 458 >gi|196248430|ref|ZP_03147131.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|196212155|gb|EDY06913.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 569 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 117/450 (26%), Positives = 198/450 (44%), Gaps = 39/450 (8%) Query: 28 PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 P L + Y D L ++LE E+ L+ + P+L Y Sbjct: 19 PNLLANLKRYLDDELY--------QYAEEKLESFYEFCLTEVDRRAVHTDREGQPRLMKY 70 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYL 142 G +V + + +++ G+ H I P + KQ + I + A+ Y+ Sbjct: 71 DRFGNDISEVWVNEGYEQTAKQTYETGIVGYVHKPI------PELGKQGNYIYSYAQGYI 124 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 ++Q E G ++T M T V + +A Y P + + L Sbjct: 125 LSQAEPGFYCPVTLT-------MATAYVLEHFADHELKTRYLPHVISTGEIELYEGATFL 177 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGC 255 TE++GG+D+ A + D Y L G K+F S+ ++LA+++G + Sbjct: 178 TERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSL 236 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +++GD + + L Sbjct: 237 FLVPWRNEDGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNL 296 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + +AI SV M+ +L EA YA RR G L D P+++ +AD+ T+ F Sbjct: 297 SRVCNAIASVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFE 356 Query: 376 LANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + FD + EA A+ R++ + K + A A EA+E GG+GYIE+ Sbjct: 357 MVALFDRVMTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVT 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ ++ G+ N + L+VL L+ K Sbjct: 417 PRLLRDAQVLTVWEGTANILALEVLRLMRK 446 >gi|308497222|ref|XP_003110798.1| CRE-ACDH-11 protein [Caenorhabditis remanei] gi|308242678|gb|EFO86630.1| CRE-ACDH-11 protein [Caenorhabditis remanei] Length = 640 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 122/484 (25%), Positives = 214/484 (44%), Gaps = 72/484 (14%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 V +L G+ + S + L R A P+L G+R DK+ W L + + Sbjct: 68 VSADLTKFGDRITS-EIEHLGRQAELEQPRLEHQDAWGKRIDKLVVCNEWQKLKQICAEE 126 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTP----- 168 G+ ++ +P VR+ H++ A+L+L + AG + P + V +T Sbjct: 127 GVISIGYENDVDPFVRR-IHQV--AKLFLFSP-SAGLVSCPMAMTDGAVKTLTVGILYSL 182 Query: 169 ------RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKI 221 ++ + ++ SR DPT ++ G +TEK+GG+D+A + +I Sbjct: 183 NLYGKHKLATEAVDRLRSR--DPT-------SAWTSGQWMTEKKGGSDVAGGCDTYAVQI 233 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQ--------VEGRVGC--FLVPRLLEDGSPNGLC 271 + Y L+G+KWF S+ +D + LA+ VEG G FL+ ++G+ NG+ Sbjct: 234 ENDTYRLNGYKWFSSAIDADVALTLARIVDSDGNAVEGSRGLSLFLLRIRDDNGNLNGIQ 293 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR-- 329 RLKNK+G + T EL +G+ + +M + + +A+ S+ MR Sbjct: 294 MVRLKNKLGTKQLPTAELLLDGAIAERIGEPGRGVAGISNMLNITRIHNAVASLGYMRRF 353 Query: 330 ---------------VSLAEAIHYARRRHVSGGILIDQ---PVMKRAIADIALDIAAATA 371 +SLA Y+ +R V G + P+ +A + ++ + Sbjct: 354 PALFSFLFKCSFSRIISLAR--DYSTKRVVFGQTQVKYSKWPLHTTTLAKMEVETRGSML 411 Query: 372 LSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L F RL + KS +A R++ P+ K + K A +++E +EC GG GY+E+ Sbjct: 412 LLFESARLLGLSEAGKSSDVDAMMLRLITPVLKLYAGKQAVPLVSEGIECFGGQGYMEDT 471 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILR 488 + R++ I G+ N + LDVL ++FS E L + GK+V +L Sbjct: 472 GLPTILRDAQVTPIWEGTTNVLSLDVL-----------RVFSGKENILLAFGKRVSQLLS 520 Query: 489 DSIS 492 ++ S Sbjct: 521 NTKS 524 >gi|138895000|ref|YP_001125453.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|134266513|gb|ABO66708.1| Probable acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] Length = 569 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 116/450 (25%), Positives = 198/450 (44%), Gaps = 39/450 (8%) Query: 28 PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 P L + Y D L +++E E+ L+ + P+L Y Sbjct: 19 PNLLANLKRYLDDELY--------QYAEEKIESFYEFCLTEVDRRAVHTDREGQPRLMKY 70 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWDRSFEPVVRKQAHKIRA-ARLYL 142 G +V + + +++ G+ H I P + KQ + I + A+ Y+ Sbjct: 71 DRFGNDISEVWVNEGYEQTAKQTYETGIVGYVHKPI------PELGKQGNYIYSYAQGYI 124 Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 ++Q E G ++T M T V + +A Y P + + L Sbjct: 125 LSQAEPGFYCPVTLT-------MATAYVLEHFADHELKTRYLPHVISTGEIELYEGATFL 177 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGC 255 TE++GG+D+ A + D Y L G K+F S+ ++LA+++G + Sbjct: 178 TERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLARIDGSGPGTKGLSL 236 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +++GD + + L Sbjct: 237 FLVPWRNEDGTLNGITIRRLKDKLGVRAVPSAEVVFDGAKAYVVGDPRKGFYYMMEALNL 296 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + +AI SV M+ +L EA YA RR G L D P+++ +AD+ T+ F Sbjct: 297 SRVCNAIASVGIMKRALEEAKQYAERRTAFGHQLTDYPMVRGTLADLTARQEVETSACFE 356 Query: 376 LANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + FD + EA A+ R++ + K + A A EA+E GG+GYIE+ Sbjct: 357 MVALFDRVMTAPHEADESEKAWLRLLIALLKMRTAEEAIAFSHEAIEMHGGNGYIEDFVT 416 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ ++ G+ N + L+VL L+ K Sbjct: 417 PRLLRDAQVLTVWEGTANILALEVLRLMRK 446 >gi|218289265|ref|ZP_03493500.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240613|gb|EED07793.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 533 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 170/338 (50%), Gaps = 23/338 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253 +TE +GG+D+ A +Q DG ++ L+G K+F S + ++D I A+ EG + Sbjct: 156 MTEVQGGSDLGA--NQTTARFDGEVWRLTGDKYFASGAGLTDYAIATARPEGAPSGPKGL 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVPRL DG+ N +RLK+K R+ + E+EF++T FL+GD ++ + Sbjct: 214 ALFLVPRLRRDGNLN-FHVRRLKDKSATRAVPSGEVEFADTEAFLIGDPHLGIYYTLENL 272 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L +A ++ + +L E +H R R G +L + +++R + D A+ A AL+ Sbjct: 273 TVSRLANAAGAMGIAQKALLEVMHRVRHRRSFGHVLHEHALIRRDLTDFAVRHAGGLALT 332 Query: 374 FRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 F + FD+A S + AR+ + K A + A AME GG G++EE + Sbjct: 333 FHAIDLFDQAWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYA 392 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN---LFEQLFSTLEQDLGSSGKKVITI 486 IAR +RE+ I G N LD L L K N + +++ + L G+ V++ Sbjct: 393 IARWHREALITPIWEGPSNIQALDFLETLMKLGNVDDVIDRIAAPLACRSVPGGRVVVSR 452 Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYR 519 +R ++ + E + ++ + +A + AA+LYR Sbjct: 453 VRQEVTALRALPRPEAEWQSKSVLRTVADLAQAASLYR 490 >gi|212639116|ref|YP_002315636.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212560596|gb|ACJ33651.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 556 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/355 (27%), Positives = 172/355 (48%), Gaps = 25/355 (7%) Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 A+ YL++Q+E G ++T A+ L + + P + S T + + + + Sbjct: 110 AQGYLLSQVEPGFYCPVTLTMATAYVLEHFADEEIKAKYLPHVIS-----TGEVELYEGA 164 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-- 252 LTE++GG+D+ A + D Y + G K+F S+ M ++LA+++G Sbjct: 165 TF----LTERQGGSDVGANEVRAVLCGDH-YEIYGEKYFASNAGMCGVALVLARIDGSEA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +L+GD Sbjct: 220 GTKGLSLFLVPWRNEDGTLNGIHIRRLKDKLGVRAVPSAEVVFEGAKAYLIGDAKKGFYY 279 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L + +A+ S+ M+ +L EA YA R G L P++K +A++ Sbjct: 280 MMEALNLSRVCNAVASIGIMKRALEEAKQYAVNRQAFGHPLTSYPMVKETLANLTARQEV 339 Query: 369 ATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 T+ F L + FD ++ +E A+ R++ + K + A A EA+E GG+G Sbjct: 340 QTSACFELISFFDRVMRTADQASEQEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNG 399 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 YIE+ R R++ ++ G+ N + L+VL L+ K + E T+ + L + Sbjct: 400 YIEDFVTPRLLRDAQVLTVWEGTANILGLEVLRLIRK-YRVHETFIQTINEQLAA 453 >gi|281201441|gb|EFA75651.1| Probable acyl-CoA dehydrogenase [Polysphondylium pallidum PN500] Length = 617 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 115/446 (25%), Positives = 195/446 (43%), Gaps = 42/446 (9%) Query: 35 NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y DS L+ + +N+ + + +L G+ V+ E R N P+ AY Sbjct: 30 NQYLEDSYLIESLKRVVPSNYLNEIEPDLVRFGDRVMG-DILEYGRACENNPPKHVAYDA 88 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R DK+ W+ L S +GL ++R + R + ++YL A A Sbjct: 89 WGRRIDKIVVDEGWNILKDISAVEGLVSIGYERKQKEFSRLYQY----LKIYLFACSSAV 144 Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 S+T A ++ L + P +R DP N G +TEK G Sbjct: 145 FDCPLSMTDGGARLLELYGDKELMTTAYPHYVTR--DPKN-------FWTSGQWMTEKTG 195 Query: 208 GTDIAAITSQGQKISDGI--YCLSGHKWFLSSPMSDAFIMLAQ------------VEGRV 253 G+D+A S + DG Y +SG+K+F S+ + ++LA+ G Sbjct: 196 GSDVANSESVAEPRKDGSNRYDISGYKYFTSATTAQTAMILARDREPETGGFRSGSRGLS 255 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+ R N + ++KNK G ++ T E+E T G ++G+ + + Sbjct: 256 AFFIKIRKDNGKDLNNMMIHKMKNKFGTKAVPTTEIELLGTEGVMIGNKGRGVPIIASIL 315 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + I SV+ MR +A A +A RR V G L + + +A++ ++ A L Sbjct: 316 NITRIHNVIHSVATMRRGVALARDFAHRRKVFGSSLAENQLYISTLAEMEIEYRAG--LQ 373 Query: 374 FRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 F L S +S E + RI+ P++K + K + V +E +EC+GG+GY+E+ Sbjct: 374 FLLNVSLLLGQSECLEKNPKIDSLLRILTPLSKLYTAKQSILVSSETIECMGGTGYMEDS 433 Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454 I R R++ +I G+ N + +DV Sbjct: 434 DIPRLLRDTQVTAIWEGTTNVLSMDV 459 >gi|299537942|ref|ZP_07051228.1| protein aidB [Lysinibacillus fusiformis ZC1] gi|298726524|gb|EFI67113.1| protein aidB [Lysinibacillus fusiformis ZC1] Length = 555 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/442 (24%), Positives = 191/442 (43%), Gaps = 26/442 (5%) Query: 35 NAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N ++ D L ++ F S +EL GE P+L Y Sbjct: 13 NFFTEDDTLQKIVEMMLDKEFLSYAQRELTDFGELCAGDIDTRAKHTDRLGEPRLQRYDA 72 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 GE +V + + + + + G+ + + + K + A+ YL++ E G Sbjct: 73 YGEEISEVWVNDGYKKTIEETYNTGIVGYV-HKHIPQLGHKGNYVYSFAQGYLLSHAEPG 131 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++T M T + +A + + + P A LTE++GG+ Sbjct: 132 FYCPVTLT-------MATAYLLDHYADEEVKQRFLPHVCATGDTDLYEGATFLTERQGGS 184 Query: 210 DIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRL 261 D+ A + +K DG Y L G K+F S+ M ++LA++EG + F VP Sbjct: 185 DVGANVVEARK--DGTAYRLYGEKYFASNAGMCGVAMVLARIEGAPAGSKGLTLFAVPWR 242 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 EDG+ N L +RLK+K+G R+ + E+EF +++G+ N + + L + +A Sbjct: 243 KEDGTTNHLRIRRLKDKLGVRAVPSGEVEFDGALAYVVGEQNKGIYYMLEALNLSRICNA 302 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + S+ MR EA HY RH G L P+++ + A + A F L +D Sbjct: 303 VASIGIMRRGFLEAKHYVTNRHAFGKPLTQYPMIQDTLGKFAAKLHVEVATVFDLIQLYD 362 Query: 382 EAKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + S +E R+ I K + A +EA+E GG+GYIE+ R R++ Sbjct: 363 KVTSGQGTQQELIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQ 422 Query: 439 ANSILLGSGNAMVLDVLNLLEK 460 ++ G+ N + L+++ L++K Sbjct: 423 VLTVWEGTANILALELIRLVDK 444 >gi|149183596|ref|ZP_01862016.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1] gi|148848686|gb|EDL62916.1| hypothetical protein BSG1_18945 [Bacillus sp. SG-1] Length = 560 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 25/420 (5%) Query: 55 HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114 HKEL G + P+L Y GE ++ + + ++ + + G Sbjct: 31 HKELIEFGRMCAGEIDERAVHTDREGQPRLIKYDRFGEDISEIWVNEGYKQTVKDTYNKG 90 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHK 172 + I + + RK + A+ YL++Q E G ++T A+ L + + Sbjct: 91 IVGYI-HKEIPELGRKGNYLYSYAQGYLLSQSEPGFYCPVTLTMATAYLLEHYASEEIKD 149 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + P + S T + + + + LTE++GG+D+ A ++ K + Y L G K Sbjct: 150 RFLPHVLS-----TGEVELYEGATF----LTERQGGSDVGANDTKAVKSGES-YRLYGEK 199 Query: 233 WFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 +F S S M ++LA++EG + F VP EDG NG+ +RLK+K+G R+ Sbjct: 200 YFASNSGMCGVAMVLARMEGAKQGSKGLSLFAVPWRKEDGKLNGIKIRRLKDKLGVRAVP 259 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + E+EF FL+G+ + + + L + +AI S+ MR + EA +YA R Sbjct: 260 SAEVEFDGAEAFLVGEASRGIHYMMEALNLSRVCNAIASIGIMRRAYMEARNYAFHREAF 319 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAYARIMAPIT 400 G L + P++K + ++A+ T+ F L FD+ S +E R++ + Sbjct: 320 GKKLAEYPMVKETLTNLAVKQEIETSAVFSLVELFDKVMSHEHPVSEKEMVLNRLLIALL 379 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K + A EA+E GG+G+IE+ + R R++ ++ G+ N + L++L L+ + Sbjct: 380 KKETAEQAIHFSHEAIEMHGGNGFIEDFVLPRLLRDAQVLTVWEGTANILGLEILRLMNR 439 >gi|328875500|gb|EGG23864.1| putative acyl-CoA dehydrogenase [Dictyostelium fasciculatum] Length = 623 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 119/444 (26%), Positives = 199/444 (44%), Gaps = 34/444 (7%) Query: 35 NAYSSDSLLVALIANF-PSVVHKE----LELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y DS L+ L+ P V+++ L G+ V+ Q R + N P+L Y Sbjct: 29 NQYLEDSYLLELLPRVVPEKVYEQIKGDLTRFGDRVMGDILQ-YGRASEANPPKLVQYDA 87 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R K+ W L S +GL ++R V++ + + ++YL A A Sbjct: 88 WGRRVSKIIVDEGWKILQDISAQEGLVAIGYERP----VQEYSRLYQYLKVYLFACSSAV 143 Query: 150 HLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 S+T A ++ L + + +R DP N +TEK G Sbjct: 144 FDCPLSMTDGGARLLELYGDKEMMQGPFKHFTTR--DPKN--FWTSGQWVKYTEMTEKTG 199 Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA----------QVEGRVG-- 254 G+D+A + DG Y +SG+K+F S+ +++ I+LA + EG G Sbjct: 200 GSDVANSETIAVGKGDGKNYDISGYKFFTSATTANSAILLARDKESAESGFRAEGSRGLS 259 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F + + G N + +LKNK G ++ T ELE T L+G + + Sbjct: 260 AFYINIRDKQGELNNIIIHKLKNKFGTKAVPTAELELLETPSRLIGAKGRGVPVIASILN 319 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA--- 371 + + + I SV MR S+A A +A RR V L + + +A++ +++ A Sbjct: 320 ITRIHNVIHSVGTMRRSVAIARDFAHRRMVFSSKLAENKLYLSTLAEMEIELRAGMQFFL 379 Query: 372 -LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ L S AK+ E + RI+ P++K + K + V +E MEC+GG+GY+E+ I Sbjct: 380 DVTILLGKSECLAKNDQTE-SLLRILTPLSKLYTAKQSITVASEVMECLGGTGYMEDSDI 438 Query: 431 ARHYRESPANSILLGSGNAMVLDV 454 R +R++ SI G+ N + +DV Sbjct: 439 PRLFRDTQVTSIWEGTTNVLSMDV 462 >gi|47226533|emb|CAG08549.1| unnamed protein product [Tetraodon nigroviridis] Length = 1206 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 125/464 (26%), Positives = 194/464 (41%), Gaps = 89/464 (19%) Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 E R + P+L + G R D + PAW + S +GL ++R+F Sbjct: 111 EWGRECELHPPRLVHFDSWGCRVDHIVTSPAWKRMKDLSAQEGLVAIGYERAFG------ 164 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI------------- 178 +R+Y M++L L SPS L T P D A K+ Sbjct: 165 ----EWSRVYQMSKL---FLFSPSS------GLYTCPLAMTDGAAKVIQSTGVSSAVAEA 211 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSS 237 +SR T + P Q + G +TE+RGG+D+A+ T + +DG Y L G KWF S+ Sbjct: 212 YSRL---TTRQPAQFWTS--GQWMTERRGGSDVASGTETVALPQTDGSYKLHGFKWFTSA 266 Query: 238 PMSDAFIMLAQVEGRVGC-----------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 +D + LA+V+GR G + R EDG G+ QRLK+K+G R T Sbjct: 267 TDADVTLTLARVQGRGGATTPGSRGLSLFYAEVRRDEDGRLKGIEVQRLKDKLGTRQMPT 326 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 EL LL L R + A YA RR G Sbjct: 327 AEL--------LLDGLQAH-----------------------RRVVQLARDYATRRTAFG 355 Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYW 403 L D + + +A + ++ A + RL + + + R++ P+ K + Sbjct: 356 KRLKDHALHMQTLARMEVETRGAFLMVMDVCRLLGREESGLASQLDTNLLRLLTPLVKLY 415 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 K A AV++E +EC GG GY E+ + R++ SI G+ N + LDVL +E+ + Sbjct: 416 TGKQAVAVVSEGLECFGGQGYCEDTGLPGLLRDAQVLSIWEGTTNILSLDVLRCVERSSG 475 Query: 464 LFEQLFSTLEQDL--GSSG----KKVITILRDSISLCKEDKGLA 501 + + T + L G+SG + + ++S K+ GLA Sbjct: 476 MVLHAYFTHTKSLLAGASGVSSLAPAVNAVDRALSELKDFSGLA 519 >gi|56420027|ref|YP_147345.1| hypothetical protein GK1492 [Geobacillus kaustophilus HTA426] gi|56379869|dbj|BAD75777.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 560 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 20/344 (5%) Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK 188 RK + A+ Y+++Q E G ++T M T V + +A Y P Sbjct: 101 RKGNYMYSYAQGYILSQAEPGFYCPVTLT-------MATAYVLEHFADDELKARYLPHVT 153 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 + + LTE++GG+D+ A + D Y L G K+F S+ ++LA Sbjct: 154 STGEVELYEGATFLTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALVLA 212 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 +++G + FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +++GD Sbjct: 213 RIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAEAYVVGD 272 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + + L + +A+ SV M+ +L EA YA RR G +L D P+++ +A+ Sbjct: 273 PRKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETLAN 332 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAM 416 + T+ F + FD + EA A+ R++ + K + A A EA+ Sbjct: 333 LTARQEVETSACFDMIALFDRVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHEAI 392 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E GG+GYIE+ R R++ ++ G+ N + L+VL L+ K Sbjct: 393 EMHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436 >gi|313216949|emb|CBY38153.1| unnamed protein product [Oikopleura dioica] Length = 616 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 145/568 (25%), Positives = 231/568 (40%), Gaps = 85/568 (14%) Query: 29 PLFIGMNAYSSDSLLVALIANFPSVVHKE-----LELLGEYVLSCTAQELARMANYNTPQ 83 P + N Y + LL I H E L+ GE +++ L P Sbjct: 51 PKPVLKNPYDGNELLQDFILRHCPPEHFERIDADLKQCGERIVN-EIDALGDECERQQPY 109 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR---SFEPVVRKQAHKIRAARL 140 L GER D++ AWH R S +GL ++ SF V Sbjct: 110 LRRTDGWGERIDEIVVSNAWHEQHRISAEEGLIAIGYENESGSFSRV------------- 156 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR---EYDPTNKAPMQKTSV- 196 H M+ ++ + + L P D A I +++ +A TS Sbjct: 157 ---------HQMAKNLLTGASSGLYNCPLAMTDGAAMITKSKRGDHEFLEEAYQNLTSRN 207 Query: 197 -----AIGLGLTEKRGGTDIAAITSQGQKISDGIYC--LSGHKWFLSSPMSDAFIMLAQV 249 G +TEK GG+D+ T + ++ C LSG+KWF S+ S LA++ Sbjct: 208 GEQFWTSGQWMTEKAGGSDVGDATHTEARWNEEKNCYELSGYKWFTSAITSQMTFTLARI 267 Query: 250 ---------EGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 EG G F + E+GS NG+ ++K K+G + T EL L Sbjct: 268 IDDEFDAVKEGSRGLSMFYLKVRDENGSLNGIQVHKMKKKLGTKQLPTAELILDGCEAHL 327 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +G+ + M + + +A+ + S MR + A YA +R L + P Sbjct: 328 VGEPGRGIALISGMLTVTRIHNAVAACSFMRRMMHLARDYATKRTAFKETLSNHPAHVSV 387 Query: 359 IADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A + D+ AA LS RL + ++ S E RI+ P+ K K V +E Sbjct: 388 LARMEADVRAAELLSLEVTRLFGKCENGQASSIEEDLMRILTPLAKAQTAKQGVVVCSEG 447 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFEQLFSTLEQ 474 +EC GG GYIEE I R R++ I G+ M LDVL ++K + + + L +++ Sbjct: 448 LECFGGQGYIEETPIPRLLRDAQVLPIWEGTSTVMSLDVLRSIQKSSGSSLQALIGDIQK 507 Query: 475 DL-GSSGKKVITILRDSISLCKEDKGLARFL--TEKIAL----------ASSAAALYRAG 521 L ++ + + R++I+ +D + RFL EK ++ A S A LY+A Sbjct: 508 KLSAANSSEKLASCRNTIATSVKD--VLRFLAQVEKESMTFQLKSARDFAFSLAKLYQAT 565 Query: 522 M-----------NDI--ADVFLENRFLD 536 + +DI A++F +NR D Sbjct: 566 LLMDHAVFTRKESDIYAANLFSKNRLND 593 >gi|325967554|ref|YP_004243746.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia 768-28] gi|323706757|gb|ADY00244.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 555 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 14/288 (4%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VG 254 TE +GG+D+ A T+ K+ G + L G K+F S ++D + A+ EG + Sbjct: 170 FTEIQGGSDLGANTTVA-KVDGGKWRLYGDKYFASGVGLADIALTSARPEGGKPGAKGLA 228 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VPRL G+ N + +RLK+K G S T E+EF + +L+GD + + + + Sbjct: 229 LFAVPRLDSSGNLNFMV-RRLKDKSGTNSVPTGEVEFHGSEAYLVGDQSNGIYYIMEDLM 287 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L +AI +V R + EA YA RR G +LI+ P++ R + D+ + + ATAL F Sbjct: 288 VSRLANAIGAVGVARKAYLEAYEYASRRRAFGKLLIEHPLVIRDLMDMEVALEGATALVF 347 Query: 375 RLANSFD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + + FD + + YAR++ I K A + AME GG G++ E I Sbjct: 348 KAVDEFDRSWHDKPPYGDRYHYARLLTHIAKNVTADAAAYITRLAMELYGGIGFLSEYPI 407 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 R +RE+ I G+ N LD+L + K N + S +E + S Sbjct: 408 ERWHREALITPIWEGTSNIQALDMLEAMNK-KNAHITMLSEMENTVAS 454 >gi|297530310|ref|YP_003671585.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|297253562|gb|ADI27008.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] Length = 560 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 24/346 (6%) Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186 RK + A+ Y+++Q E G ++T A+ L ++ + P + S T Sbjct: 101 RKGNYVYSYAQGYILSQAEPGFYCPVTLTMATAYVLEHFADEKLKATYLPHVIS-----T 155 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIM 245 + + + + LTE++GG+D+ A + D Y L G K+F S+ ++ Sbjct: 156 GEVELYEGATF----LTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALV 210 Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 LA+++G + FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +++ Sbjct: 211 LARIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVV 270 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 GD + + L + +A+ SV M+ +L EA YA RR G +L D P+++ + Sbjct: 271 GDPAKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVRETL 330 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAE 414 A++ T+ F + FD + EA A+ R++ + K + A A E Sbjct: 331 ANLTARQEVETSACFDMIALFDRVMAAPHEANEAEKAWLRLLIALLKMRTAEEAIAFSHE 390 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A+E GG+GYIE+ R R++ ++ G+ N + L+VL L+ K Sbjct: 391 AIEMHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436 >gi|261419729|ref|YP_003253411.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|319766547|ref|YP_004132048.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|261376186|gb|ACX78929.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|317111413|gb|ADU93905.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 560 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 24/346 (6%) Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPT 186 RK + A+ Y+++Q E G ++T A+ L ++ + P + S T Sbjct: 101 RKGNYVYSYAQGYILSQAEPGFYCPVTLTMATAYVLEHFADEKLKATYLPHVIS-----T 155 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIM 245 + + + + LTE++GG+D+ A + D Y L G K+F S+ ++ Sbjct: 156 GEVELYEGATF----LTERQGGSDVGANAVRAVPCGDH-YKLYGEKYFASNAGRCGVALV 210 Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 LA+++G + FLVP EDG+ NG+ +RLK+K+G R+ + E+ F +++ Sbjct: 211 LARIDGSGPGTKGLSLFLVPWRKEDGTLNGISIRRLKDKLGVRAVPSAEVVFDGAKAYVV 270 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 GD + + L + +A+ SV M+ +L EA YA RR G +L D P+++ + Sbjct: 271 GDPAKGFYYMMEALNLSRVCNAVASVGIMKRALEEAKQYAERRTAFGHVLTDYPMVREPL 330 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAE 414 A++ T+ F + FD + EA A+ R++ + K + A A E Sbjct: 331 ANLTARQEVETSACFDMIALFDRVMAAPHEASEAEKAWLRLLIALLKMRTAEEAIAFSHE 390 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A+E GG+GYIE+ R R++ ++ G+ N + L+VL L+ K Sbjct: 391 AIELHGGNGYIEDFVTPRLLRDAQVLTVWEGTANILALEVLRLMRK 436 >gi|295695774|ref|YP_003589012.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411376|gb|ADG05868.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 539 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 36/385 (9%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 ++T + A+ H +W K+ + E + +TE +GG+D+ A Sbjct: 122 TITGQTAYAIHKYAPAHAEWKEKLLAGE-------------MFGATWMTENQGGSDLGAN 168 Query: 215 TSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGS 266 T+ + DG ++ L+G K+F S + ++D I+ A+ EG + FLVPRL G Sbjct: 169 TTVAR--PDGEVWRLTGDKYFASGAGLTDVAIVTARPEGAPAGPKGLALFLVPRLNRAGE 226 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 N +RLK+K R+ + E+E N+ +L+G + + L +A+ + Sbjct: 227 LN-YRVRRLKDKSATRAVPSGEVELENSEAYLVGRAEQGIYYTLENLTVSRLANAVAGMG 285 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + + E + RRRH G L D P+++R + D+A+ + T L F +F A Sbjct: 286 IAKKAHLEVMERVRRRHSFGRALQDHPLVRRDLVDMAVRLVGGTVLGFHAVEAFQRAWHE 345 Query: 387 ----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 S YAR ++ + K A + AME GG G++EE ++AR +RE+ I Sbjct: 346 RPPYSPAYHYARFLSHLAKNRTADHAAEITRLAMELFGGLGFLEEYAVARWHREALITPI 405 Query: 443 LLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQ----DLGSSGKKVITILRDSISLCK 495 G N LD+L ++K + LE+ + G + + + + D+ L Sbjct: 406 WEGPSNIQALDLLETVQKKNAHEGFLAEFIPILEKVGTVEAGWARETIEKVFTDAAGLNP 465 Query: 496 ED-KGLARFLTEKIALASSAAALYR 519 E+ + A+ ++A A+ A LYR Sbjct: 466 EELQWYAKHWVVQMADAAQVALLYR 490 >gi|258512811|ref|YP_003186245.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479537|gb|ACV59856.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 533 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253 +TE +GG+D+ A +Q DG ++ LSG K+F S + ++D I A+ EG + Sbjct: 156 MTEVQGGSDLGA--NQTTARFDGEVWRLSGDKYFASGAGLTDYAIATARPEGAPSGPKGL 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVPRL +DGS N +RLK+K R+ + E+EF +T FL+GD ++ + Sbjct: 214 ALFLVPRLRKDGSLN-FHVRRLKDKSATRAVPSGEVEFVDTEAFLIGDKHLGIYYTLENL 272 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L +A ++ + +L E +H R R G L D +++R + D A+ A AL+ Sbjct: 273 TVSRLANAAGAMGIAQKALLEVMHRVRHRRSFGHALRDHALIRRDLTDFAVRHAGGLALT 332 Query: 374 FRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 F+ + FD+A S + AR+ + K A + A AME GG G++EE + Sbjct: 333 FQAVDLFDQAWHERPPYSPKYHIARLYTHLAKTRTADHAAHLTAMAMELFGGLGFLEEYA 392 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK-GT--NLFEQLFSTLEQDLGSSGKKVITI 486 IAR +RE+ I G N LD L L K G+ ++ +++ + L G + Sbjct: 393 IARWHREALITPIWEGPSNIQALDFLETLIKLGSVDDVIDRIAAPLLGHDVPGGGDAVKR 452 Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYR 519 +R ++ + E + ++ + +A + AA+LYR Sbjct: 453 VRQEVAALRALPRPEAEWQSKSVLRTVADLAQAASLYR 490 >gi|126652595|ref|ZP_01724759.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905] gi|126590586|gb|EAZ84703.1| hypothetical protein BB14905_19510 [Bacillus sp. B14905] Length = 555 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 24/441 (5%) Query: 35 NAYSSDSLL-----VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N ++ D L + L F S H+EL GE P+L Y Sbjct: 13 NFFTDDDTLQKVLEMMLDKEFSSYAHRELTDFGELCAGAIDVRAKHTDRQGEPRLQRYNA 72 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 GE +V + + + + + G+ + + + K + A+ YL++ E G Sbjct: 73 YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++T M T + +A + + + P A LTE++GG+ Sbjct: 132 FYCPVTLT-------MATAYLLDHYAEEGVKQRFLPHVCATGDMELYEGATFLTERQGGS 184 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLL 262 D+ A + + + + Y L G K+F S+ M ++LA++EG + F VP Sbjct: 185 DVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIEGAQAGSKGLTLFAVPWRN 243 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 EDGS N L +RLK+K+G ++ + E+EF +++GD N + + L + +A+ Sbjct: 244 EDGSANQLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDQNKGIYYMLEALNLSRICNAV 303 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+ MR EA HY R+ G L P+++ + A + A F L +D+ Sbjct: 304 ASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLYDK 363 Query: 383 AKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 S ++ R+ I K + A +EA+E GG+GYIE+ R R++ Sbjct: 364 VTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQV 423 Query: 440 NSILLGSGNAMVLDVLNLLEK 460 ++ G+ N + L+++ L++K Sbjct: 424 LTVWEGTANILALELIRLVDK 444 >gi|295400114|ref|ZP_06810094.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312110641|ref|YP_003988957.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|294977893|gb|EFG53491.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311215742|gb|ADP74346.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 557 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 34/455 (7%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQ----ELARMANYN----TPQLHAYGPGGERWDKV 97 L+AN + KEL E L Q ++ R A + P+L Y G +V Sbjct: 11 LLANLKKYLDKELYAYAEKELEQFYQLCMTDIDRRAVHTDREGQPRLIKYDRFGNEISEV 70 Query: 98 EFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157 + + +++ G+ + + + RK + A+ YL++Q+E G ++T Sbjct: 71 WVNEGYQQTAKQTYETGIVGYV-HKPIPELGRKGNYIYSYAQGYLLSQVETGVYCPVTLT 129 Query: 158 SASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 A+ L + K + P + S T + + + + LTE++GG+D+ A Sbjct: 130 MATAYLLEHFADENLKKKYLPHVIS-----TGEIELYEGATF----LTERQGGSDVGANA 180 Query: 216 SQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLLEDGSPN 268 + D Y L G K+F S+ +LA+++G + FLVP EDG+ N Sbjct: 181 VRAVPCGDH-YKLFGEKYFASNAGRCGVAAVLARIDGSEPGTKGLSLFLVPWRNEDGTLN 239 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 + +RLK+K+G R+ + E+ F +++GD + + L + +A+ S+ M Sbjct: 240 SIQIRRLKDKLGVRAVPSAEVVFDGAKAYVIGDPKKGFYYMMEALNLSRVCNAVGSIGIM 299 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA----- 383 + +L EA YA R G L D P+++ +AD+ T+ F + + F+ Sbjct: 300 KRALEEAKQYAANRTAFGHKLTDYPMVRETLADLTARQEVQTSACFEMISVFERVMTAPD 359 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 ++ EE A+ R++ + K + A A EA+E GG+GYIE+ R R++ ++ Sbjct: 360 EATEEEKAWNRLLIALLKMRTAEEAIAFAHEAIEMHGGNGYIEDFVTPRLLRDAQVLTVW 419 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 G+ N + L+VL L+ K + EQ + + + L S Sbjct: 420 EGTANILGLEVLRLMRK-YRVHEQFIAKMAEALSS 453 >gi|311032765|ref|ZP_07710855.1| hypothetical protein Bm3-1_19884 [Bacillus sp. m3-13] Length = 568 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 113/427 (26%), Positives = 199/427 (46%), Gaps = 38/427 (8%) Query: 55 HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114 KEL LGE + + P+L Y GE +V + + + + + G Sbjct: 31 EKELADLGESCANEIEERAVHTDREGQPRLIKYNKMGEDVSEVWVNEGYKKTVEETYNRG 90 Query: 115 L----HCSIWDRSFEPVVRKQAHKIRA-ARLYLMAQLEAGHLMSPSVTSASMVAL--MTT 167 + H I P + +Q + + + A+ YL++Q E G ++T A+ L Sbjct: 91 IVGYVHKEI------PALGRQGNYLYSYAQGYLLSQTEPGFYCPVTLTMATAYLLDHYAD 144 Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-QKISDGIY 226 V + P + S T + + + + LTE++GG+D+ A +Q S Y Sbjct: 145 QHVKNKFLPHVIS-----TGEVELFEGATF----LTERQGGSDVGANETQAVPHPSKHTY 195 Query: 227 CLSGHKWFLSSPMSDAFIM-LAQVEGR------VGCFLVPRLLEDGSP--NGLCYQRLKN 277 L+G K+F S+ M LA++ G + F VP EDGS NG+ +RLK+ Sbjct: 196 LLTGEKYFASNAGQCGVAMVLARIPGAPKGTKGLSLFAVPWKKEDGSGKLNGIEIRRLKD 255 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G R+ + E+ F++ G+L+G+ + + + L + +AI S+ MR + EA + Sbjct: 256 KLGVRAVPSAEVLFNDAEGYLVGEPSKGIHYMMEALNLSRVCNAIASLGIMRRAYTEARN 315 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAA 391 YA+ R G LI+ P+++ ++ D+A+ + + SF L FD K EE A Sbjct: 316 YAKNRVTFGDRLINFPMIRESLVDMAVKLEVELSASFELVALFDRVMRNDGVKVSEEEIA 375 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 R++ + K + A EA+E GG+G+IE+ R R++ ++ G+ N + Sbjct: 376 LNRLLIALLKKETAEQAVHFSHEAIEMHGGNGFIEDFVTPRLLRDAQVLTVWEGTANILG 435 Query: 452 LDVLNLL 458 ++VL L+ Sbjct: 436 MEVLRLM 442 >gi|118431019|ref|NP_147195.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1] gi|116062346|dbj|BAA79340.2| acyl-CoA dehydrogenase [Aeropyrum pernix K1] Length = 543 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 121/451 (26%), Positives = 211/451 (46%), Gaps = 37/451 (8%) Query: 24 ALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELEL--LGEYVLSCTAQELARMANYNT 81 A + + G+N Y D L + F S KE +L LGEYV + + R+ + Sbjct: 6 AFGEVSMAYGLNHYLVDKPLRDTLRYFTS---KEPDLAGLGEYVGTELYEVAYRVDRLSW 62 Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P + GER D V PA LRR++ ++ +R P V H+ A + Sbjct: 63 PVHVMWSVRGERSDTVLVDPA----LRRAVDRLMYEYGVNR--HPYVGGSWHE-HFAGIN 115 Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 L+ G +++ ++ +A + + K + R ++ PM + Sbjct: 116 LVGDPGVGCILTITMQTAYALWKYGGEEL------KHYYRRLAGLDRPPMIGATW----- 164 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 TE +GG+D+ A + +K DG++ L+G+K+F S + ++D ++ A+ EG + Sbjct: 165 FTEIQGGSDLGANETVARKAGDGVWLLTGYKYFASGAGLADIALVTARPEGAPAGAKGLS 224 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMK 313 F VPR G N +RLK+K G + T E+E ++ +L+GD + +ED+ Sbjct: 225 LFAVPRYRRGGGLN-YSVRRLKDKSGTIAVPTGEVELQDSEAYLIGDADKGIYYTLEDLM 283 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I +SA +V R + EA +YA+ R G +I+ P+++R + ++ + I + AL+ Sbjct: 284 ISRIANSA-GAVGIARKAYLEAYNYAKHRRAFGKRIIEHPLVRRDLLEMEVLIEESLALT 342 Query: 374 FRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + F+++ S YAR+M I K + A V AME GG G++ E + Sbjct: 343 HKAVDLFEKSTGDRPPYSMTYHYARLMTHIAKNMTAQAAARVTMLAMELFGGIGFLREYA 402 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R +RE+ I G+ N LD+L + K Sbjct: 403 VERWHREALITPIWEGTSNIQALDMLEAMWK 433 >gi|89097346|ref|ZP_01170236.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911] gi|89088169|gb|EAR67280.1| hypothetical protein B14911_17245 [Bacillus sp. NRRL B-14911] Length = 557 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 112/442 (25%), Positives = 195/442 (44%), Gaps = 24/442 (5%) Query: 34 MNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYG 88 MN Y D L ++ +F + KELE G + P+L Y Sbjct: 1 MNFYKDDPNLAFVLKQYMYEDFFAWAEKELEAFGGLCAGEIDERAVHTDREGQPRLIKYD 60 Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 G V + + + ++ + G+ + + + RK + A+ YL++Q E Sbjct: 61 KMGNDISHVWLNEGYKKTVEQTYNAGIVGYV-HKEIPELGRKGNYVYSYAQGYLLSQTEP 119 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G ++T M T + +A + +Y P + + LTE++GG Sbjct: 120 GFYCPVTLT-------MATAYLIDHYADEELKEKYLPHVISTGETELFEGATFLTERQGG 172 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIM-LAQVEGR------VGCFLVPRL 261 +D+ A + + DG Y + G K+F S+ + M LA+ EG + FLVP Sbjct: 173 SDVGANEVKAV-LEDGQYRIYGEKYFASNAGACGVAMVLARREGAASGSKGLSLFLVPWR 231 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 E G NGL +RLK+K+G R+ + E+ F L+GD + + + L + ++ Sbjct: 232 KETGELNGLEIRRLKDKLGVRAVPSGEVVFHGAEAHLVGDADKGIHYMMEALNLSRICNS 291 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + S+ M+ + EA YA R+ G L D P++K +A +A T+ F L +D Sbjct: 292 VASIGIMQRAFLEAKQYAFVRNAFGSRLADFPMVKETLAKLACKQEVETSAVFSLIALYD 351 Query: 382 E---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ EE A R++ + K + A E++E GG+GYIE+ R R++ Sbjct: 352 RVAAGEASREEEAMNRLLIALLKKETAEQAIHFAHESIEMHGGNGYIEDFVTPRLLRDAQ 411 Query: 439 ANSILLGSGNAMVLDVLNLLEK 460 ++ G+ N + L++L L+EK Sbjct: 412 VLTVWEGTANILGLEILRLIEK 433 >gi|54293780|ref|YP_126195.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens] gi|53753612|emb|CAH15070.1| hypothetical protein lpl0836 [Legionella pneumophila str. Lens] Length = 567 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 35/367 (9%) Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P++ Y G+R D+V HPA+ + G I+ + + K + Sbjct: 73 NLPKIEQYNAIGQRDDRVIHHPAY-------VRAG--DIIYGSNLMQYLLKPGQMKKTLS 123 Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 L+L++ EAGH P SA ++ RV ++ + Y P + Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 LTE +GG+D+ A ++ + +SG KWF S+ +D +M A+ + Sbjct: 177 GAQFLTEIQGGSDVGANATRANLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +G FLVP L+DGSPN +RLK KIG R+ AT E++F + +GD V+ G Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEIDFEGALAYPMGD--VAEGIHLV 294 Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M+ +++L SV GM R + A +YA+ R +I+ P++K ++A I + A Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354 Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A F +A DE + E + R +A I KY+ K + I ++ + G+ Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414 Query: 423 GYIEERS 429 G IE S Sbjct: 415 GTIENFS 421 >gi|169826548|ref|YP_001696706.1| protein aidB [Lysinibacillus sphaericus C3-41] gi|168991036|gb|ACA38576.1| Protein aidB [Lysinibacillus sphaericus C3-41] Length = 555 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 106/441 (24%), Positives = 191/441 (43%), Gaps = 24/441 (5%) Query: 35 NAYSSDSLL-----VALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N ++ D L + L F S H+EL GE P+L Y Sbjct: 13 NFFTGDETLQKVLEMMLDKEFSSYAHRELTDFGELCADAIDVRAKHTDRQGEPRLQRYNA 72 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 GE +V + + + + + G+ + + + K + A+ YL++ E G Sbjct: 73 YGEEVSEVWVNDGYKKTIEETYNTGIVGYV-HKDIPQLGHKGNYVYSFAQGYLLSHAEPG 131 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++T M T + +A + + + P A LTE++GG+ Sbjct: 132 FYCPVTLT-------MATAYLLDHYAEEEVKQRFLPHVCATGDLELYEGATFLTERQGGS 184 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLL 262 D+ A + + + + Y L G K+F S+ M ++LA+++G + F VP Sbjct: 185 DVGANVVEAKLVGNE-YRLYGEKYFASNAGMCGVAMVLARIDGAQAGSKGLTLFAVPWRN 243 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 EDGS N L +RLK+K+G ++ + E+EF +++GD N + + L + +A+ Sbjct: 244 EDGSVNHLRIRRLKDKLGVKAVPSGEVEFDGALAYVVGDPNKGIYYMLEALNLSRICNAV 303 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+ MR EA HY R+ G L P+++ + A + A F L +D+ Sbjct: 304 ASIGIMRRGFLEAKHYVSNRYAFGKPLTQYPMIQDTLGKYAAKLHVEVATIFDLIQLYDK 363 Query: 383 AKS---RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 S ++ R+ I K + A +EA+E GG+GYIE+ R R++ Sbjct: 364 VTSGQGTEQDIIMNRLYIAIMKKETAEQAVHYASEAIELHGGNGYIEDFVTPRLLRDAQV 423 Query: 440 NSILLGSGNAMVLDVLNLLEK 460 ++ G+ N + L+++ L++K Sbjct: 424 LTVWEGTANILALELIRLVDK 444 >gi|307609596|emb|CBW99098.1| hypothetical protein LPW_08831 [Legionella pneumophila 130b] Length = 567 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 35/367 (9%) Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P++ Y G+R D+V HPA+ + G I+ + + K + Sbjct: 73 NLPKIEQYNAIGQRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123 Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 L+L++ EAGH P SA ++ RV ++ + Y P + Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 LTE +GG+D+ A ++ + +SG KWF S+ +D +M A+ + Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +G FLVP L+DGSPN +RLK KIG R+ AT E+ F + +GD V+ G Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGD--VAEGIHLV 294 Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M+ +++L SV GM R + A +YA+ R +I+ P++K ++A I + A Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354 Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A F +A DE + E + R +A I KY+ K + I ++ + G+ Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414 Query: 423 GYIEERS 429 G IE S Sbjct: 415 GTIENFS 421 >gi|148658395|ref|YP_001278600.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148570505|gb|ABQ92650.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1] Length = 558 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 119/460 (25%), Positives = 189/460 (41%), Gaps = 50/460 (10%) Query: 26 NQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARM---A 77 QPP N Y+ D +L AL + + V +L +GE EL R+ Sbjct: 7 QQPPSL--GNQYTDDRVLRSFLRRALPRDVLAQVEPDLTTMGE----LAGGELYRLHLAD 60 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P L + GER D +E P W R + GL ++R++ R Sbjct: 61 RLNEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGVFSR-------- 112 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT--NKAPMQKTS 195 + Q +L PS + T P D A + D T ++A + S Sbjct: 113 -----IVQFALVYLFHPSTD------VYTCPLAMSDGAARTLVEAGDATLIDRALPRLIS 161 Query: 196 ------VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 G +TE GG+D++ + + DG++ L G KWF S+ + LA+ Sbjct: 162 RDPDRCWTSGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATTGQMALALARP 221 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 +G + F + ++G G+ RLK+K+G R T EL T L+G N Sbjct: 222 DGNPPGSRGLALFYIELRDDEGRLQGIRVNRLKDKLGTRKVPTAELSLEGTPARLVGAPN 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + M + + +++ + S MR +A A YARRR L QP+ +A + Sbjct: 282 GGVRAIVPMLQVTRIWNSVSAASFMRRGIALARDYARRRVAFDAPLNRQPLHTETLATLQ 341 Query: 364 LDIAAATALSFRLANSF--DEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIG 420 + A LSF A +E E + R++ ITK + A V++E +E G Sbjct: 342 AEFEGAFHLSFLTAGLLGAEETGVADERQRHLLRVLTSITKLTTGRQAVDVMSEVIEAFG 401 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+GY+E+ + R++ I G+ N + LD L L + Sbjct: 402 GAGYVEDTGLPTLLRDAHVLPIWEGTTNVLALDTLRALAQ 441 >gi|148360550|ref|YP_001251757.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila str. Corby] gi|296106385|ref|YP_003618085.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|148282323|gb|ABQ56411.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila str. Corby] gi|295648286|gb|ADG24133.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] Length = 567 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 35/367 (9%) Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P++ Y G+R D+V HPA+ + G I+ + + K + Sbjct: 73 NLPKIEQYNAIGKRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123 Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 L+L++ EAGH P SA ++ RV ++ + Y P + Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 LTE +GG+D+ A ++ + +SG KWF S+ +D +M A+ + Sbjct: 177 GAQFLTEIQGGSDVGANATRASLDEQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +G FLVP L+DGSPN +RLK KIG R+ AT E+ F + +GD V+ G Sbjct: 237 GLGLFLVPSRLDDGSPNHYYLRRLKQKIGTRTMATAEINFEGALAYPMGD--VAEGIHLV 294 Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M+ +++L SV GM R + A +YA+ R +I+ P++K ++A I + A Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354 Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A F +A DE + E + R +A I KY+ K + I ++ + G+ Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414 Query: 423 GYIEERS 429 G IE S Sbjct: 415 GTIENFS 421 >gi|52841039|ref|YP_094838.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296824|ref|YP_123193.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris] gi|52628150|gb|AAU26891.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750609|emb|CAH12016.1| hypothetical protein lpp0865 [Legionella pneumophila str. Paris] Length = 567 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/367 (27%), Positives = 166/367 (45%), Gaps = 35/367 (9%) Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N P++ Y G+R D+V HPA+ + G I+ + + K + Sbjct: 73 NLPKIEQYNAIGQRDDRVIHHPAY-------VRSG--DIIYGSNLMQYLLKPGQMKKTLS 123 Query: 140 LYLMAQL--EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 L+L++ EAGH P SA ++ RV ++ + Y P + Sbjct: 124 LFLLSSHAGEAGH-NCPIACSAGVI------RVLSRYSQLEKTSYYLDKLTHPSFSYNFT 176 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----- 252 LTE +GG+D+ ++ + +SG KWF S+ +D +M A+ + Sbjct: 177 GAQFLTEIQGGSDVGTNATRANLDKQNQWRISGEKWFCSNANADLILMTARFDEETPGTK 236 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 +G FLVP L+DGSPN +RLK KIG R+ AT E++F + +GD V+ G Sbjct: 237 GLGLFLVPGRLDDGSPNHYYLRRLKQKIGTRTMATAEIDFEGALAYPMGD--VAEGIHLV 294 Query: 312 MKILIYLDSAI--MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M+ +++L SV GM R + A +YA+ R +I+ P++K ++A I + A Sbjct: 295 MENVLHLSRIFNSFSVLGMSRRAYQIACYYAKNRRAFNHPIIEYPLVKESLAKIKSENLA 354 Query: 369 ATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A F +A DE + E + R +A I KY+ K + I ++ + G+ Sbjct: 355 MLASVFHMARCQDELDALPEPQQTKSQQLLLRTLANINKYFTAKRSVDNIHHCLDLLAGN 414 Query: 423 GYIEERS 429 G IE S Sbjct: 415 GTIENFS 421 >gi|294948872|ref|XP_002785937.1| Protein aidB, putative [Perkinsus marinus ATCC 50983] gi|239900045|gb|EER17733.1| Protein aidB, putative [Perkinsus marinus ATCC 50983] Length = 561 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 178/399 (44%), Gaps = 17/399 (4%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 +E R +TP Y G R D++ P W + + +GL + R P+ ++ Sbjct: 52 REAGRQCELHTPYHIPYDAWGNRIDEIWTCPQWKNMHIIAAQEGLIALAYTR---PLGKE 108 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 + + A+LYL A + ++T + + + R + + Sbjct: 109 LSRVYQLAKLYLFAPSSGLYSCPLAMTDGAAFVIEKSERYRNEQLEAALGHLMSQDGEEF 168 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSDAFIMLA 247 G +TE+ GG+D+ A T+ S DG++ L+G+KWF S+ + LA Sbjct: 169 WTS-----GQWMTERGGGSDVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLA 223 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + GR+ F +P + G NGL RLK+K+G R T E+E + + + Sbjct: 224 RTPDTNGRLEMFYLPARDQQGKLNGLKIVRLKDKLGTRQLPTAEMELNASKAVRVTYDGR 283 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + ++ + + + + + +GMR + A Y+ +R G L + P +A++ + Sbjct: 284 GLSMIMNLASITRIHNTVSAAAGMRRIIQLAKDYSTKREAFGRRLQELPAHVATLAELEV 343 Query: 365 DIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + AA +L RL + + + +E R++ P++K + A V ++ +E GG Sbjct: 344 EARAACSLWLEMARLLGKVEASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGG 403 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +G++E+ + H R++ +I G+ N +DVL ++ + Sbjct: 404 AGFMEDTGLPSHLRDAQVLAIWEGTSNVQAMDVLRVITQ 442 >gi|328951545|ref|YP_004368880.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328451869|gb|AEB12770.1| acyl-CoA dehydrogenase domain-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 534 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 20/336 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 +TE +GG+D+ A + +K G K+F S + ++D ++ A+ EG + Sbjct: 156 MTEIQGGSDLGANRTLARKEDGAWRLFGGDKYFASGAGLADVALVTARPEGAPPGPKGLA 215 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVPRL G+ N +RLK+K G R+ + E+E + + +G L + Sbjct: 216 LFLVPRLNRKGTLNYRV-RRLKHKSGTRAVPSGEVELEGSEAYPIGRLEEGIYYTLETLT 274 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L +A+ ++ + + EA R RH G L++QP+++ + D+A+ A AL+F Sbjct: 275 VSRLANAVAAMGIAQKAQLEARFRVRARHAFGKRLLEQPLVRYDLTDLAVRQAGGLALAF 334 Query: 375 RLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +FD A + YAR ++ + K A A+ AME GG G++EE ++ Sbjct: 335 HAVAAFDAAWRDRPPYTPAYHYARFLSHLAKNRTADHAAAITQRAMELFGGLGFLEEYAV 394 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG---TNLFEQLFSTLEQDLGSSGKKVITIL 487 AR +RE+ I G N LD+L ++K E++ +TL + + +L Sbjct: 395 ARWHREALITPIWEGPSNIQALDMLEAMQKKHAHRPFLEEVTATLGAQPDPEAQATLKVL 454 Query: 488 RDSISLCKEDK-----GLARFLTEKIALASSAAALY 518 ++S + LA+ E++A A++ AALY Sbjct: 455 EATLSRLNGARPEAAAWLAKAALERLADAATVAALY 490 >gi|289806286|ref|ZP_06536915.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 214 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 6/210 (2%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W E R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAW----EEEARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 AQ+EAG L ++T +A+ + L P DW + S YD QK + IG+G+ Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGM 184 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 TEK+GG+D+ + T+ ++++D Y L GHK Sbjct: 185 TEKQGGSDVLSNTTHAERLADDSYRLVGHK 214 >gi|167720412|ref|ZP_02403648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei DM98] Length = 406 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 111/400 (27%), Positives = 184/400 (46%), Gaps = 39/400 (9%) Query: 33 GMNAYSSDSLLVALI------ANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHA 86 G+N ++SD AL+ A F EL LG S LA A+ N P L Sbjct: 25 GINFFTSDPDCAALLRLHLGEARFRGF-EPELRALGLRA-SDELDRLASRADRNPPVLQP 82 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHD-GLHC-SIWDRSFEPVVRKQAHKIRAARLYLMA 144 GE + ++ HP + L R + GL S D + P+V+ A +L Sbjct: 83 RTRRGEPLESIDKHPDYVELERVAYAQLGLAAMSHRDGAPPPLVKY-------ALTFLFV 135 Query: 145 QLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 Q E G S+T + L + + + + P++ SR++D + M + Sbjct: 136 QAEFGLCCPVSMTDSLTRTLRRFGSRELVERFLPRLASRDFDALYQGAMF---------M 186 Query: 203 TEKRGGTDIAAITSQGQK--ISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 TE+ G+D+ I ++ + +DG + L G KWF S+ +D ++LA+ EG Sbjct: 187 TEQAAGSDVGRIATRAVRGTSADGSATWRLFGDKWFCSNADADLAMVLARPEGAPDGVKG 246 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+P+ L DGS N RLK+K+G+RS A+ E+ +L+G++ + DM Sbjct: 247 LALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALDGAEAYLIGEIGRGFHQMADM 306 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L + + + MR + EA+H AR R G LID P+M+R + + + A +L Sbjct: 307 INMSRLSNGVRAAGLMRRATTEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSL 366 Query: 373 SFRLANSFDEAKSRSEEA-AYARIMAPITKYWCCKMAPAV 411 ++A +A + +A RI+ P+ K+ C+ A V Sbjct: 367 FMQIALLLAKADAGDAQAGGCVRILTPLVKFRACRDARRV 406 >gi|86159445|ref|YP_466230.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775956|gb|ABC82793.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans 2CP-C] Length = 559 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 116/448 (25%), Positives = 195/448 (43%), Gaps = 39/448 (8%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMAN 78 L PP+ +A+ +D LL +A P S + EL LG AQ+LA Sbjct: 5 LQDPPVLP--HAFDADPLLQEYLARTLPPDVLSAISPELRELGALASGPLAAQQLAE--R 60 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 P L + P G R D++E P W R + GL + ++R P R Sbjct: 61 LVEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERRHGPHSR--------- 111 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKT 194 + QL +L+ PS+ + MT R D AP+ P T++ P + Sbjct: 112 ----VHQLAMVYLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARMW 167 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-- 252 + G +TE+ GG+D++ + ++ + + L G KWF S+ ++ + LA+ EG Sbjct: 168 TS--GQWMTERAGGSDVSGTETVARRDGEA-FRLWGTKWFSSATTAEMALALARPEGNPP 224 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + F + DG+ NG+ RLK+K+G R T EL + + Sbjct: 225 GSAGLALFYLETRGPDGASNGILVNRLKDKLGTRKLPTAELTLEGALAQPVAGTSGGVRA 284 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + M + +A+++ + M ++A A YA RR G L +P+ +A + + A Sbjct: 285 ITPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAGLEAEREA 344 Query: 369 ATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 L+FR A++ + A R + P+ K K A AV ++A+E GG+GY+ Sbjct: 345 GFLLAFRAVELLGRAEAGEADPGARALLRAVTPLAKLTTGKQAVAVASDAVEAFGGAGYV 404 Query: 426 EERSIARHYRESPANSILLGSGNAMVLD 453 E+ + R R++ I G+ N + L+ Sbjct: 405 EDTGLPRLLRDAQVLPIWEGTTNVLALE 432 >gi|313902989|ref|ZP_07836384.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] gi|313466713|gb|EFR62232.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] Length = 539 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 121/459 (26%), Positives = 200/459 (43%), Gaps = 68/459 (14%) Query: 91 GERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH 150 G R D+V PA ALLR P+ R Y + L A Sbjct: 70 GHRVDRVRLSPAQQALLR--------------ELAPMNRPPYEGGSWHHHYALGYLVA-- 113 Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 P + + T +HK +AP+ KA + + +TE +GG+D Sbjct: 114 --DPGIYCILTITNQTAYVIHK-YAPEF------AEWKAKLLRGEFWGATWMTEVQGGSD 164 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLE 263 + A T Q + D + L G K+F S + ++D ++ A+ EG + FLVPR+ Sbjct: 165 LGANTLQATRDGDA-WRLDGEKYFCSGAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNR 223 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 G N +RLK+K R+ + E++F + FL+G+ IY ++ Sbjct: 224 AGELN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEKG----------IYYTLEVL 272 Query: 324 SVSGMRVSLAEAIHYARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATAL 372 +VS + ++A + AR+ H+ G L+D P+++R + D+A+ IA L Sbjct: 273 TVSRLANAIA-GMGIARKAHLEVLERVRRRRSFGRQLVDHPLIRRDLTDMAVRIAGGLVL 331 Query: 373 SFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 F A+ F DE + YAR ++ + K A V AME GG G++EE Sbjct: 332 GFHAADLFEKAWDELPPYTSRYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEY 391 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGS----SGKK 482 ++AR +RE+ I G N LD+L + K F F + + G+ + ++ Sbjct: 392 AVARWHREALITPIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIAMLEKAGTPEARTARE 451 Query: 483 VI--TILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 VI T++R + S +E + A+ T ++A A+ LY+ Sbjct: 452 VIEGTLVRLAGSEPEEAQWYAKDATARLADAAQVGLLYK 490 >gi|159899922|ref|YP_001546169.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892961|gb|ABX06041.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 556 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 121/501 (24%), Positives = 204/501 (40%), Gaps = 53/501 (10%) Query: 25 LNQPPLFIGMNAYSSDSLLVALI-----ANFPSVVHKELELLGEYVLSCTAQELARMANY 79 NQP +G N YS D LL + A+ S + L+ +G+ + Q L Sbjct: 4 FNQPAPQLG-NQYSDDRLLQLYLRRRLPADVLSQIKPALQTIGDLAGNELYQ-LQLADRL 61 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 N PQL + GER D++ P W + + GL + ++++F R Sbjct: 62 NEPQLTQWDAWGERIDQIVLTPLWQRAEQIAASYGLIATAYEQTFHEYSRT--------- 112 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVH-----------KDWAPKIFSREYDPTNK 188 Q +L PS S MT + P + SR+ D Sbjct: 113 ----CQFALAYLFHPSSDVYSCPLAMTDGAARTLLQAGNQALIERAIPHLISRDPDQFWT 168 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 + G +TE GG+D+ + ++ DG + L G KWF S+ S + LA+ Sbjct: 169 S---------GQWMTESTGGSDVGLSETIARQAEDGTWRLYGRKWFSSATTSQMALTLAR 219 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 EG + F V + G + RLK+K+G R T EL T + L Sbjct: 220 PEGNPAGGRGLALFYVETRDQRGRLTQIEVNRLKDKLGTRKVPTAELNLLGTPAIPVQGL 279 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + M + +++ +V MR +A A YA++R G +L +P+ +A + Sbjct: 280 RDGVRAIVPMLQITRTWNSVSAVGFMRRGMALAQDYAQKRWAFGSLLNQKPLHVDTLAGL 339 Query: 363 ALDIAAATALSFRLAN--SFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + A A L+F L DE +S ++ R++ I K + A +E +E Sbjct: 340 QAEYAGAFLLTFYLIELLGLDETGRSTPQQRQLLRLLTSIAKLTTARQAVNHTSEIIESF 399 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF----EQLFSTLEQD 475 GG+GY+E+ + R++ SI G+ N + LD L L + ++ EQ+ L Sbjct: 400 GGAGYVEDTGLPSLLRDAQVLSIWEGTTNVLALDSLRALSEDPGIWPVLREQVNLWLSNA 459 Query: 476 LGSSGKKVITILRDSISLCKE 496 S + I +++ ++ C++ Sbjct: 460 HDPSLSQAIVVVQTALDRCEQ 480 >gi|220918318|ref|YP_002493622.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956172|gb|ACL66556.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 559 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 118/447 (26%), Positives = 200/447 (44%), Gaps = 39/447 (8%) Query: 26 NQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMANY 79 PP+ +A+ +D LL +A P S + EL LG AQ+LA Sbjct: 6 QDPPILP--HAFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQQLAE--RL 61 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 P L + P G R D++E P W R + GL + ++R H I +R Sbjct: 62 VEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERR---------HGI-LSR 111 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKTS 195 ++ MA + +L+ PS+ + MT R D AP+ P T++ P + + Sbjct: 112 VHQMAMV---YLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARTWT 168 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252 G +TE+ GG+D++ + + + + L G KWF S+ ++ + LA+ EG Sbjct: 169 S--GQWMTERAGGSDVSGTETVARPDGEA-FRLWGTKWFSSATTAEMALALARPEGNPPG 225 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F + L DG+ NG+ RLK+K+G R T EL + L+ + Sbjct: 226 SAGLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAI 285 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M + +A+++ + M ++A A YA RR G L +P+ +A + + A Sbjct: 286 SPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAG 345 Query: 370 TALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 L+FR L + ++ + A R + P+ K K A AV ++A+E GG+GY+E Sbjct: 346 FLLAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVE 405 Query: 427 ERSIARHYRESPANSILLGSGNAMVLD 453 + + R R++ I G+ N + L+ Sbjct: 406 DTGLPRLLRDAQVLPIWEGTTNVLALE 432 >gi|197123520|ref|YP_002135471.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196173369|gb|ACG74342.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 559 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 117/447 (26%), Positives = 200/447 (44%), Gaps = 39/447 (8%) Query: 26 NQPPLFIGMNAYSSDSLLVALIA-NFP----SVVHKELELLGEYVLS-CTAQELARMANY 79 PP+ +A+ +D LL +A P S + EL LG AQ+LA Sbjct: 6 QDPPVLP--HAFDADPLLQEYLARTLPPEVLSEISPELRELGALASGPLAAQQLAE--RL 61 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 P L + P G R D++E P W R + GL + ++R H + +R Sbjct: 62 VEPTLVQWDPWGRRVDRIEPTPLWREAARLAARHGLVAAAYERR---------HGV-LSR 111 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP--TNKAPMQKTS 195 ++ MA + +L+ PS+ + MT R D AP+ P T++ P + + Sbjct: 112 VHQMAMV---YLLEPSMDVYACPLAMTDGAARTLLDLAPRALVERAVPRLTSRDPARTWT 168 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--- 252 G +TE+ GG+D++ + + + + L G KWF S+ ++ + LA+ EG Sbjct: 169 S--GQWMTERAGGSDVSGTETVARPDGEA-FRLWGTKWFSSATTAEMALALARPEGNPPG 225 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F + L DG+ NG+ RLK+K+G R T EL + L+ + Sbjct: 226 SAGLALFYLETRLPDGASNGILVNRLKDKLGTRKLPTAELTLDGALALPVVGLSGGVRAI 285 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M + +A+++ + M ++A A YA RR G L +P+ +A + + A Sbjct: 286 SPMLNVTRTWNALVAAAYMARAVALARDYAGRRRAFGTPLRARPLHADTLAALEAEREAG 345 Query: 370 TALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 L+FR L + ++ + A R + P+ K K A AV ++A+E GG+GY+E Sbjct: 346 FLLAFRAVELLGRAEAGEADAGARALLRAVTPLAKLTTGKQAVAVASDAIEAFGGAGYVE 405 Query: 427 ERSIARHYRESPANSILLGSGNAMVLD 453 + + R R++ I G+ N + L+ Sbjct: 406 DTGLPRLLRDAQVLPIWEGTTNVLALE 432 >gi|153005858|ref|YP_001380183.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029431|gb|ABS27199.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 560 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 137/482 (28%), Positives = 210/482 (43%), Gaps = 57/482 (11%) Query: 25 LNQPPLFIGMNAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLS-CTAQELARMAN 78 PP NAY SD LL AL P ELE LGE AQ+ A Sbjct: 4 FQDPPRLA--NAYLSDPLLREHLARALSGTLPEA-EPELEHLGELAAGRLFAQQAAE--R 58 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 + P+L + G R D+VE P W + GL + ++R + R Sbjct: 59 HLEPRLEPFDAWGRRVDRVELTPLWREAAALAARHGLVAAAYER-------RHGGASRVH 111 Query: 139 RLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA---------PKIFSREYDPTN 187 +L L+ +++ PS+ + MT R D P++ SR DP Sbjct: 112 QLALV------YVLEPSLDVYACPLAMTDGAARTLLDAGNAALVARALPRLTSR--DPAR 163 Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA 247 TS G +TE+ GG+D++ + ++ + + L G KWF S+ ++ + LA Sbjct: 164 ----MWTS---GQWMTERTGGSDVSGTETVARRDGEA-WRLHGTKWFSSATTAEMALALA 215 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + +G + F + EDGS NG+ RLK K+G R T EL + Sbjct: 216 RPDGAPAGSRGLALFYLETRDEDGSTNGVLVNRLKEKLGTRKLPTAELTLDGALALPVSG 275 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L V M + +++++ +GM+ +LA A YARRR G L +P+ +A Sbjct: 276 LADGVRAVAPMLTVTRTWNSVVAAAGMQRALALARDYARRRAAFGAPLARKPLHADTLAG 335 Query: 362 IALDIAAATALSFRLANSFDEAK----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + + A L+FR A A+ S +E A R + P+ K K A AV +EA+E Sbjct: 336 LEAEREGAFLLAFRAAALLGRAECGEASDAERLAL-RAVTPLAKLTTGKQAVAVASEALE 394 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 C GG+GY+E+ + R R++ I G+ N + LDVL L G E L + + + LG Sbjct: 395 CFGGAGYVEDTGLPRLLRDAQVLPIWEGTTNVLALDVLRAL-AGEGTAEALAAEIRRHLG 453 Query: 478 SS 479 + Sbjct: 454 DA 455 >gi|16081732|ref|NP_394117.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum DSM 1728] gi|10639812|emb|CAC11784.1| acyl-CoA dehydrogenase related protein [Thermoplasma acidophilum] Length = 538 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 110/445 (24%), Positives = 198/445 (44%), Gaps = 47/445 (10%) Query: 34 MNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGER 93 MN +S D +L ++ + +L+ +G YV ++ + +Y P L +G R Sbjct: 1 MNYFSDDIVLQDVLNYLGYDIDDKLQEMGRYVSEEMIEDSIFIDHYGEPVLQMWGILDNR 60 Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMS 153 D + ++ R + G+ I A+ LM +G+L+S Sbjct: 61 TDGIWISRTHQNMIDRLLDMGVVSKI-----------------ASENDLMYHFISGYLIS 103 Query: 154 PSVTSASMVALMTTP---RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRG 207 + ++ T R + D + F Y ++ LG TE +G Sbjct: 104 DAGLFCTLTLTGQTAYGLRKYGDARLQQFLNHYANSDHW----------LGATYYTEIQG 153 Query: 208 GTDIAAITSQGQKISDGIYCLSG-HKWFLSSP-MSDAFIMLAQVEGR------VGCFLVP 259 G+D+ A + + D Y L+G +K+F S+ ++D I+ A++EG + F VP Sbjct: 154 GSDLGANQTTAVRSGDK-YILNGENKYFASNAGLADGAIVTARMEGARPGAKGISVFFVP 212 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 L DG+ N +R+K+K+G T E+ ++ G+LLGD ++ + +D Sbjct: 213 TLRSDGTRN-YEIRRIKDKLGTIMVPTGEVVLKDSEGYLLGDEKNGIYIALEILEVSRID 271 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 AI ++ R +L EA YA +R G +ID P+M R +A++ ++ A+T LS A+ Sbjct: 272 DAIAAMGIARKALWEAYFYANKRTAFGKPIIDHPLMLRDLAEMESEVEASTVLSMIAADM 331 Query: 380 FDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 F++A ++ AR + K + V ME GG G+++E + + +R Sbjct: 332 FNKASHLKPPYDDQYHMARAFTHMAKNIASWSSDYVTRYTMEVFGGKGFLKEFPVEKFHR 391 Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460 +S S+ G+ N LD L +++K Sbjct: 392 DSIVTSLWEGTSNIQALDFLEIVQK 416 >gi|289581512|ref|YP_003479978.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289531065|gb|ADD05416.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 625 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 195/454 (42%), Gaps = 67/454 (14%) Query: 58 LELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHC 117 L GE V A + N+ +P+L Y GE + V + A + R + G+ Sbjct: 47 LSAFGETVGHTIADNADDIDNH-SPELEPYDKYGEVQNWVRYPEAQYENERLTYEQGIVA 105 Query: 118 SIWDRSFE-PVVRKQ----AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172 SFE P R + +H + A YL++ + G ++T+ + + L R Sbjct: 106 D----SFEAPPGRDEPMPLSHNL--AMQYLLSYADPGFDCPVAMTAGAALVLEKFGREDD 159 Query: 173 ---DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCL 228 ++ + SR+Y+ + M LTEK+GG+D+ A ++ + S G + L Sbjct: 160 VLCEYYDALTSRDYEDLIEGAM---------FLTEKQGGSDVGANETRAEWDESAGYWRL 210 Query: 229 SGHKWFLSSPMSDAFIMLAQVE----GRVGC--FLVPRLLEDG----------------- 265 SG KWF S+ ++ + LA+ E G G FLVP DG Sbjct: 211 SGEKWFCSNIDAEGTLALARTENAPAGTAGLSMFLVPHADPDGVSRDDSDDADGNGPYTK 270 Query: 266 ------------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 N Y+RLK+K+G S T E+EF+ +L+G+ + +M Sbjct: 271 GQRREDGPLAPAETNDQFYRRLKDKLGTISVPTGEVEFTGAKAYLVGEEEAGFRQMAEML 330 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L L +A S + L E+ YA R G + P+M+ + D+A+ AAT + Sbjct: 331 NLERLSNAAASCGIIGRVLLESKIYAANREAFGETIDQYPLMRADLVDMAVTHEAATTYT 390 Query: 374 F---RLANSFDEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 F RL + + A+ E A A R++ PI K +MA + ME GG+GY+ Sbjct: 391 FEAARLLSKRERAERAGETADDAYRLMRLLIPIAKARTARMAVDTASYGMEIHGGNGYVN 450 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E R R++ I G+ N + LDVL LE+ Sbjct: 451 EFVTNRLLRDAQVLPIWEGTENILSLDVLRALER 484 >gi|4157980|emb|CAA76079.1| SOS response Ada system protein [Geodia cydonium] Length = 446 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 26/288 (9%) Query: 199 GLGLTEKRGGTDIAAIT-SQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC-- 255 G +TE+RGG+D+ T + K DG Y L G+KWF S+ +D LA+V+ G Sbjct: 40 GQWMTERRGGSDVGQSTDTVALKQEDGSYRLYGYKWFTSASDADITFTLARVQDTHGLVT 99 Query: 256 --------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F + LE + N L RLK+K+G R T E+ + L+G Sbjct: 100 PGSRGLSMFYLKTQLESEAHNRLELVRLKDKLGTRQLPTAEVLLDGSTAHLVGIEGRGVA 159 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + M + L ++++S + MR L + Y RR V G L DQP+ + + ++ Sbjct: 160 HISPMLTITRLHNSVISSAYMRRILQLSRDYCTRRTVFGKYLADQPLHMHTLGQMEVETR 219 Query: 368 AATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 T L+ RL + + ++ R++ I K + K A +VI+E +E GG+ Sbjct: 220 GCTLLALETARLVGLQEAGLATKSDSLLLRLLNSINKLYTAKQAVSVISEGLESFGGA-- 277 Query: 425 IEERSIARHY-----RESPANSILLGSGNAMVLDVLNLLEK-GTNLFE 466 +I RH+ R++ +I G+ N + LD+L +L+K G +FE Sbjct: 278 ----AIWRHWSPCLLRDAQVGTIWEGTTNVLSLDLLRVLQKVGQEIFE 321 >gi|313903798|ref|ZP_07837187.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] gi|313465986|gb|EFR61511.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] Length = 529 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 133/526 (25%), Positives = 224/526 (42%), Gaps = 83/526 (15%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCT-AQELARMANYNTPQ-LHAYGP 89 G N + D L ++A++ P+ E +L LS E+A +++ P L + Sbjct: 9 GQNHWEVDPDLRHVLAHYWPAFTAHEAQLRRFGALSGKEVYEVAYHVDHDAPPVLVMHDL 68 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R D+V PA ALLR P+ R Y + L A Sbjct: 69 DGHRVDRVRLSPAQEALLR--------------ELAPMNRPPYEGGSWHHQYALGYLVA- 113 Query: 150 HLMSPSVTSASMVALMTTPRVHK------DWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 P + + T +HK +W K+ E+ +T Sbjct: 114 ---DPGIYCILTITNQTAYIIHKYAAEFGEWKDKLLRGEFWGAT-------------WMT 157 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256 E +GG+D+ A T Q + D + L G K+F S + ++D ++ A+ +G + F Sbjct: 158 EVQGGSDLGANTLQATRNGDA-WRLDGEKYFCSGAGLTDVAVVTARPQGAPAGPKGLALF 216 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVPR+ G+ N +RLK+K R+ + E++F + FL+G+ I Sbjct: 217 LVPRMNRAGALN-YHVRRLKDKSATRAVPSGEVDFRGSEAFLVGEAEQG----------I 265 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVS-----------GGILIDQPVMKRAIADIALD 365 Y +++VS + ++A + AR+ H+ G L+D P+++R + D+A+ Sbjct: 266 YYTLEVLTVSRLANAIA-GMGIARKAHLEVLERVRRRRSFGRPLVDHPLIRRDLTDMAVR 324 Query: 366 IAAATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 IA L F A+ F DE + YAR ++ + K A V AME GG Sbjct: 325 IAGGLMLGFHAADLFEKAWDELPPYTARYHYARFLSHLAKNRTADHAAEVTRLAMELFGG 384 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK--GTNLFEQLFSTLEQDLGS- 478 G++EE ++AR +RE+ I G N LD+L + K F F + + G+ Sbjct: 385 LGFLEEYAVARWHREALITPIWEGPSNIQALDLLEAMHKKRAHEAFLAEFIPMLEKAGTA 444 Query: 479 ---SGKKVI--TILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 + ++VI T+ R + S +E + A+ T ++A A+ LY+ Sbjct: 445 EARTAREVIEATLARLAGSKPEEAQWYAKDATARLADAAQVGLLYK 490 >gi|229578308|ref|YP_002836706.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009022|gb|ACP44784.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.G.57.14] Length = 546 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLVLVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N L +RLK K G S T E+EF+++ +L+G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|294952949|ref|XP_002787528.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239902534|gb|EER19324.1| acyl-coa dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 1295 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 137/273 (50%), Gaps = 9/273 (3%) Query: 199 GLGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSDAFIMLAQV---EGR 252 G +TE+ GG+D+ A T+ S DG++ L+G+KWF S+ + LA+ GR Sbjct: 906 GQWMTERGGGSDVGAATATTAVESTNEDGVWLLTGNKWFTSATDAQMTFTLARTPDTNGR 965 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F +P ++G NGL RLK+K+G R T E+E + + + + ++ Sbjct: 966 LDMFYLPTRDQEGKLNGLKIVRLKDKLGTRQLPTSEMELNASKAVRVTYNGRGLSMIMNL 1025 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + + + + +GMR + A Y+ +R G L + P +A++ ++ AA +L Sbjct: 1026 ASITRIHNTVSAAAGMRRIIQLAKDYSTKRVAFGRRLQELPAHVATLAELEVEARAACSL 1085 Query: 373 SF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL + + + +E R++ P++K + A V ++ +E GG+G++E+ Sbjct: 1086 WLEMARLLGKVEASTATDDEMMIFRLLVPLSKLQTGRQAVDVASKGIELFGGAGFMEDTG 1145 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + H R++ +I G+ N +DVL ++ + T Sbjct: 1146 LPSHLRDAQVLAIWEGTSNVQAMDVLRVITQTT 1178 >gi|163846383|ref|YP_001634427.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524149|ref|YP_002568620.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667672|gb|ABY34038.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448028|gb|ACM52294.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl] Length = 485 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 106/396 (26%), Positives = 183/396 (46%), Gaps = 37/396 (9%) Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 TP L + G+R D++ + + ++R+ G+ IW R F + + Sbjct: 47 GTPWLRMFDRQGQRVDEILYPAEYWRMVRQGYQSGV---IW-RVFTETSLVPHYLLG--- 99 Query: 140 LYLMAQLEAGHLMSP---SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 YL A +AG L P S+++A +A T V + P + Q +V Sbjct: 100 -YLTAFYDAG-LYCPYTVSLSTAVPLAKYGTEAVKAQFLPLLLR-----------QDATV 146 Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ------- 248 G +TE GG+D+ + DG + LSG K+F S+ ++ ++ A+ Sbjct: 147 WQGATWMTEIGGGSDLGTTVATIAVAEDGRWYLSGDKYFASNVGAELAVVAARFATGPAD 206 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G +G FLVPR DGS N +RLK+KIG R+ T E+E + +LLG Sbjct: 207 IRG-LGLFLVPRYRADGSLN-YTIRRLKDKIGTRAVPTGEVELRRSEAYLLGRAEWGIYL 264 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L + +++ SV+ + +LAEA+ +A +R G + P++KR I + +++ A Sbjct: 265 ILETLNLSRVANSVGSVALAQRALAEAVSFAHQRRAFGKPIAAHPLLKRQIEERIVELEA 324 Query: 369 ATALSFR----LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A AL++ L + E+ R++A + KYW + A ME GG G Sbjct: 325 AFALAWEAVCLLEQVWHVTPPYPEQYHLFRLLAHLAKYWTAEFAVQTAKWGMEVHGGIGT 384 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + E + R R++ I G+ + +LD L ++E+ Sbjct: 385 LAEYNAERWLRDAMILPIWEGTPHRQILDGLEVMER 420 >gi|227826884|ref|YP_002828663.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.14.25] gi|227458679|gb|ACP37365.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.14.25] Length = 546 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N L +RLK K G S T E+EF+++ +L+G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|15898411|ref|NP_343016.1| partial transposase ISC1225 [Sulfolobus solfataricus P2] gi|229582993|ref|YP_002841392.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] gi|238619012|ref|YP_002913837.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.4] gi|13814828|gb|AAK41806.1| Partial transposase ISC1225 [Sulfolobus solfataricus P2] gi|228013709|gb|ACP49470.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] gi|238380081|gb|ACR41169.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.4] Length = 546 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N L +RLK K G S T E+EF+++ +L+G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|291297408|ref|YP_003508806.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber DSM 1279] gi|290472367|gb|ADD29786.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279] Length = 534 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 161/340 (47%), Gaps = 23/340 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------V 253 +TE +GG+D+ A +Q + + +G ++ L G K+F S + ++D I+ A+ EG + Sbjct: 156 MTEVQGGSDLGA--NQVRAVPEGAVWRLWGDKYFSSGAGLTDYAIVSARPEGAPAGPKGI 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVPRL G N +RLK+K+ R+ + E+EF+ L+G + + Sbjct: 214 ALFLVPRLDSQGQLN-YRVRRLKDKLATRAVPSGEVEFAGAEAHLIGRAEEGIYYILETL 272 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L L +A ++ R + EA+ + R G L + P+++R + D+A+ IA AL+ Sbjct: 273 TLSRLANAAGAMGLARKAQLEALFRVQARRAFGKKLEEHPLIRRDLTDLAVRIAGGLALT 332 Query: 374 FRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 FR ++DEA S YAR++A + K + ME GG G++E+ + Sbjct: 333 FRAVAAWDEAWQETPPYSPRYHYARLLAHLAKARTAEHGTYCTQLGMELFGGVGFVEDFA 392 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL-EKGTN--LFEQLFSTLEQDLGSSGKKVITI 486 IAR RE+ I G N LD L +L KG + + LE + + Sbjct: 393 IARLAREALITPIWEGPANVQALDTLEVLFRKGAAEPFLAEFGAKLEAIQSEEARLALAR 452 Query: 487 LRDSISLCK-----EDKGLARFLTEKIALASSAAALYRAG 521 LR ++ + E + A+ +A A++ A LY G Sbjct: 453 LRHTLDYLQTLSPEEAQWHAKEALRTLADAATVALLYELG 492 >gi|323473995|gb|ADX84601.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus REY15A] Length = 546 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 112/456 (24%), Positives = 211/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N +RLK K G S T E+EF+++ +L+G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFFI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|229584058|ref|YP_002842559.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] gi|228019107|gb|ACP54514.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] Length = 546 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 113/453 (24%), Positives = 211/453 (46%), Gaps = 41/453 (9%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ + G ++T+ + AL + + K S +++ T Sbjct: 115 YLVS--DPGIACILTITNQTAYALY---KYGSEELKKYVSYLIGDSDELLFGAT------ 163 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR------ 252 TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 164 WFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSGAKG 222 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FLVP+ G N L +RLK K G S T E+EF+++ +L+G+ + + Sbjct: 223 LSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYITED 281 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I + Sbjct: 282 LMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGGMVV 341 Query: 373 SFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G++EE Sbjct: 342 TFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGFLEE 401 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I R +RE+ I G+GN L++L + K Sbjct: 402 FPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|323476950|gb|ADX82188.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus HVE10/4] Length = 546 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 111/456 (24%), Positives = 211/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGH-KWFLSS-PMSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ K+F S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKYFASGVGLADLALVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N +RLK K G S T E+EF+++ +++G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFFI-RRLKRKSGTNSVPTGEVEFNSSEAYIIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|227830022|ref|YP_002831801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.S.2.15] gi|227456469|gb|ACP35156.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.S.2.15] Length = 546 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 111/456 (24%), Positives = 210/456 (46%), Gaps = 47/456 (10%) Query: 26 NQPPLFI----GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNT 81 N P +I G N ++ D L ++ F V + LGE+ E+A + Sbjct: 5 NSPFSYISSAYGKNHFNIDKPLQKILEYFD--VKADFSKLGEFA-GGELYEIAEHVDKRA 61 Query: 82 PQLHA-YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL 140 +H + GER D+V P+ A ++R I D +D + P + HK A + Sbjct: 62 RPIHVMWSVNGERVDEVWIDPSLRAAIKRLIKD------FDINKFPYKEENWHK-HYASI 114 Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 YL++ P + + T ++K + ++ ++Y P + S + Sbjct: 115 YLVS--------DPGIACILTITNQTAYALYKYGSEEL--KKYVPY----LIGDSDELLF 160 Query: 201 G---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDAFIMLAQVEGR--- 252 G TE +GG+D+ + + + + + L G+ +S ++D ++ A+ G Sbjct: 161 GATWFTEIQGGSDLGSNLVEAE-FNGKYWLLKGNTKHFASGVGLADLALVSARPMGSKSG 219 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + FLVP+ G N L +RLK K G S T E+EF+++ +L+G+ + Sbjct: 220 AKGLSLFLVPKKNNKGEKNFLI-RRLKRKSGTNSVPTGEVEFNSSEAYLIGEKEYGIYYI 278 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ L +A+ ++ R S E+ +Y++ R G LI+ P++++ + ++ L I Sbjct: 279 TEDLMVSRLSNAVGALGIARKSFLESYYYSQSRKAFGKALIEHPLIQKDLLEMELMIEGG 338 Query: 370 TALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++F+ + F ++ +E+ YAR++ I+K+ ++A V AME GG G+ Sbjct: 339 MVVTFKAIDQFQKSWKAMPPFYNEQYHYARLLTHISKHITAEIASQVSRMAMEIHGGIGF 398 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +EE I R +RE+ I G+GN L++L + K Sbjct: 399 LEEFPIERLHREALITPIWEGTGNIQALEMLEAMVK 434 >gi|297565898|ref|YP_003684870.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus silvanus DSM 9946] gi|296850347|gb|ADH63362.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM 9946] Length = 533 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 26/340 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 +TE +GG+D+ A ++ ++ ++ L G K+F S + ++D ++ A+ EG + Sbjct: 156 MTEVQGGSDLGANLTRA-RMDGEVWRLEGDKYFSSGAGITDYAVVSARPEGAPVGPKGLA 214 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVPRL G N +RLK K+ R+ + E+E +NT +L+G ++ Sbjct: 215 LFLVPRLDRAGHLN-YRVRRLKEKLATRAVPSGEVELANTEAYLVGKAEEGIYYTLEVLT 273 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L L +A ++ R + EA+ +RR G L P+++R + D+A+ IA AL+F Sbjct: 274 LSRLANAAGAMGLARKAQLEALTRTKRRTAFGKTLDAHPLIRRDLTDLAVRIAGGLALTF 333 Query: 375 RLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 R +++ A S S YAR + + K + + AME GG G++E+ +I Sbjct: 334 RAVQAWEGAWSERPPYSSRYHYARFLTHLAKARTAEHGTSCTQLAMELFGGVGFVEDFAI 393 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL--FEQLFSTLEQDLGSSGKKVITILR 488 AR RE+ I G N LD L ++ + L F F + +G+ + Sbjct: 394 ARLAREALITPIWEGPANVQALDTLEVMFRKGALEPFLGEFVPALERVGTPSSR------ 447 Query: 489 DSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV 528 I+L +K LAR + A A L + + +ADV Sbjct: 448 --IALEALEKTLARL---RQAEPEEAQWLAKESLRTLADV 482 >gi|50545948|ref|XP_500511.1| YALI0B04906p [Yarrowia lipolytica] gi|49646377|emb|CAG82739.1| YALI0B04906p [Yarrowia lipolytica] Length = 577 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 127/486 (26%), Positives = 201/486 (41%), Gaps = 71/486 (14%) Query: 23 FALNQPPLFIGMNAYSSDSLLVALIANFPS-----VVHKELELLGEYVLSCTAQELARMA 77 F ++P L +N Y +S L + + S V EL LG+YV+S E A Sbjct: 8 FFQDRPTL---LNQYDGNSALKKVAEFYLSHKTLAAVLPELRELGDYVISKEIFEWQEDA 64 Query: 78 NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRA 137 N P++ G G +++ W L ++ G+ ++R + +++ + Sbjct: 65 ETNIPRVEHQGTFGHPKNRLIVSQGWKLLKAKAFAAGIISDSYERKYA----EESRVVAF 120 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH---KDWAPKIFSREYDPTNKAPMQKT 194 + +L + A L ++T + L + ++W + S DPT Sbjct: 121 LKNWLFSASSATVLCPFAMTDGTARVLEVFAKDDERLQEWYNHLVSS--DPTQ------- 171 Query: 195 SVAIGLGLTEKRGGTDI----AAITSQGQK--------------------ISDGI----- 225 + G +TE+ GG+D+ TS +K SD + Sbjct: 172 AWTSGQWMTERPGGSDVRNTETVATSSYRKEEGAESRPNASANNQIENNATSDIVTVGTG 231 Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIG 280 Y ++G KWF S+ S+ I+LA+ EG G CF + +L +P + RLK K G Sbjct: 232 PKDYTVNGFKWFSSATDSECSILLAKREGETGLSCF-IGKL----TPETVIINRLKKKFG 286 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 + T ELE N LLG N + + + L S+ ++S SL A YA Sbjct: 287 TIALPTAELELRNHPVILLGQANNGVPVIATVLNITRLYSSTSALSCYGRSLHIAKQYAL 346 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFR----LANSFDEAKSRSEEAAYARIM 396 R V G L P + +A + + L F L S S EA R++ Sbjct: 347 VRSVFGKKLSATPAHLKTLAHEQVQLTGLMFLLFEGISLLGQSEVTGLSPHREAVL-RVL 405 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER---SIARHYRESPANSILLGSGNAMVLD 453 I K +CCK A +E ME +GG+GY+E +IAR YRES N I G+ N + D Sbjct: 406 PGIAKAYCCKKATIGCSECMEALGGAGYLEHEIDINIARLYRESQVNVIWEGTTNVLSDD 465 Query: 454 VLNLLE 459 V +++ Sbjct: 466 VARVMK 471 >gi|121599453|ref|YP_994234.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124385253|ref|YP_001028113.1| protein aidB [Burkholderia mallei NCTC 10229] gi|121228263|gb|ABM50781.1| acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] Length = 261 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 6/187 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQ P NA+ +D+ LV + + S L G + + LA +AN + P+L Sbjct: 14 NQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALADLANRHAPEL 73 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 + P GER D +EFHP+WH LL R +GLH + +P R A R A +L A Sbjct: 74 ATHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFS---DP--RPGAMAARCAGYFLHA 128 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 QLE+G L ++T AS+ L P + K+++RE+D + QK S+ +G+G+TE Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188 Query: 205 KRGGTDI 211 K+GG+D+ Sbjct: 189 KQGGSDV 195 >gi|257075763|ref|ZP_05570124.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1] Length = 550 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 103/433 (23%), Positives = 181/433 (41%), Gaps = 31/433 (7%) Query: 33 GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92 G N Y D ++ +F H L LG Y + + + P + G+ Sbjct: 15 GKNHYDIDKPFQKIL-DFYMGKHLNLSPLGAYAGKDLYETTDYIDKVSQPLQKMWSIDGK 73 Query: 93 RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 R D + P +L + IH+ + R H Y M L A Sbjct: 74 RIDSILISPMEKHVLDKLIHE-----------YGISRPYFHGKSIMEHYAMGYLVA---- 118 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 P + + T +HK +AP F +Y P + T + TE +GG+D+ Sbjct: 119 DPGIYCILTLTHQTAYAIHK-YAPD-FQNDYVPGLIGDTKDTLLG-ATWFTEIQGGSDLG 175 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSP------MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266 A ++ + +G++ L+G K+F S+ ++ AF + FL+PR DG Sbjct: 176 ANKTRAES-GNGLWYLTGDKYFASNAGLADVALTSAFHGDNHGAKGLSLFLIPRKNNDGE 234 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 N +RLK K +S + E+E ++ +++GD + + + ++ LD+A + Sbjct: 235 LN-YRLRRLKEKSATKSVPSGEVELDSSEAYMIGDAGKAIYYITEDLMVSRLDNAAAACG 293 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR----LANSFDE 382 R + EA +Y +R G +LI+ P + + + D+ + + + AL+F+ NS + Sbjct: 294 IARKAYLEAYYYTGKRKTFGKLLIEHPGIVKDLLDMEVLLEGSIALTFKSIELFNNSINS 353 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 +E Y R+M I K + + A E GG G++ E + R +RE+ I Sbjct: 354 KPPYDDEYNYTRLMTHIVKNITADSSARITQMATELHGGIGFLSEFPVERWHREALITPI 413 Query: 443 LLGSGNAMVLDVL 455 G+ N LD+L Sbjct: 414 WEGASNIQALDML 426 >gi|255951270|ref|XP_002566402.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255] gi|211593419|emb|CAP99803.1| Pc22g25150 [Penicillium chrysogenum Wisconsin 54-1255] Length = 633 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 221/504 (43%), Gaps = 63/504 (12%) Query: 17 QPS--DSLFALNQPPLFIGMNAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCT 69 QP+ DS + + PL N Y+SD SL AL PS V L G +S Sbjct: 5 QPATADSGYITDPGPL---ENTYTSDPSLQRALAWYLPSATLQSVQPHLTQFGAEAISEQ 61 Query: 70 AQELARMANYNTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV 127 +E + A N P + ++ G+R+D ++ W L + + + + +D+S V Sbjct: 62 VREWSADAERNVPYVKSHNVWGKRYDYDRLVTTEGWKQLGKWGARNRIVSAGYDKSLG-V 120 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-T 186 R+ ++ A YL + + L S ++ A + + R++K + F + Sbjct: 121 DRR---TVQYALNYLYS--PSSGLYSCPISMTDGAAFILSSRINKLPSTHPFHTAFQGLI 175 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIA-----------AITSQGQKISDGIYCLSGHKWFL 235 ++ TS G +TE+ GG+D+ A +S + + DG Y +SG K+F Sbjct: 176 SEKDDHWTS---GQWMTERAGGSDVQNTETWATYSPLASSSGSEPLGDGDYLISGFKFFS 232 Query: 236 SSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNAT 286 S+ ++ ++LA+ G++ FL P R + G NG+ RLKNK+G + T Sbjct: 233 SATDANLALLLAKTPSGKLSTFLAPLRRTVVGGDGVSRVVSNGVRIHRLKNKLGTKELPT 292 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ELE + L+G+++ + + + L + + S++G R +++ +A+ R G Sbjct: 293 AELELKDMRAHLIGEIDQGIVTIAPLLNVTRLHTFVGSLAGWRRAISITKSFAKARTTVG 352 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS--------------EEAAY 392 L P+ R +AD+ + A L++ F + R+ E Sbjct: 353 EPLWLIPMHLRLLADMEVKHRGAMNLAWFTVALFGVVEDRTPSSNKIAHLPQPGKEAEVV 412 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSG 447 R + K KMA A I E E +GG GY++E +I+R R + NSI G+ Sbjct: 413 FRTLTATAKAVISKMATAGIQECQESMGGVGYMDEADEPEFNISRILRNNAVNSIWEGTT 472 Query: 448 NAMVLDVLNLLEKGTNLFEQLFST 471 N + + + L K NL ++F T Sbjct: 473 NVLASEFVRFLIKKDNL--KIFGT 494 >gi|48478531|ref|YP_024237.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790] gi|48431179|gb|AAT44044.1| acyl-CoA dehydrogenase [Picrophilus torridus DSM 9790] Length = 537 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 104/435 (23%), Positives = 188/435 (43%), Gaps = 40/435 (9%) Query: 33 GMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGE 92 G+N ++ D L + I + + L +G Y+ S ++ + +Y P L +G Sbjct: 13 GVNYFNDDKTLHS-IMKYLNYHDDALADMGLYISSEMIEDSMFIDHYAKPVLKTWGILDN 71 Query: 93 RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 + V ++++ R + G+ I D+ LM +G+L+ Sbjct: 72 EIEGVWISRDHNSIIERLLDMGVVSRILDKD------------------LMFHFTSGYLI 113 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 S S ++ T K ++ + F Y N + T TE +GG+D Sbjct: 114 SDSGLFCTLTLTGQTVYALKKYSNNLNDFIEHY--RNDHWLGATYY------TEIQGGSD 165 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-----FLVPRLLED 264 + A + D +K+F S ++D I+ A++ + G F VP L D Sbjct: 166 LGANKTVAVSNGDSFILNGENKYFASDAGLADGAIVTARLNNKPGVKGISVFFVPALKPD 225 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GSPN +RLK+K+G T E+ +N+ G++LG+ N ++ + +D A+ + Sbjct: 226 GSPN-YNIRRLKDKLGTILVPTGEVILNNSIGYMLGNDNNGIYIALEILEISRIDDALAA 284 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF---- 380 R +L E+ Y+ RH G +I+ P++ R + ++ ++ A+T LSF A+ F Sbjct: 285 AGIARKALWESYLYSLERHAFGKAIIEHPLIIRDLIEMQSEVDASTVLSFIAADMFSKVT 344 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 DE ++ AR + K + V AME GG G++ + + + +R+S Sbjct: 345 DEEPPYHDDYHMARAFTHMAKNISSWASDHVTRYAMEIFGGKGFLYDFPVEKFHRDSIVT 404 Query: 441 SILLGSGNAMVLDVL 455 S+ G+ N LD L Sbjct: 405 SLWEGTSNIQALDFL 419 >gi|212543523|ref|XP_002151916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210066823|gb|EEA20916.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 611 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 121/516 (23%), Positives = 211/516 (40%), Gaps = 75/516 (14%) Query: 16 HQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELAR 75 HQPS PP ++ A + + L PS + EL E+VLS Sbjct: 13 HQPS-------LPPQYLEDRALNR-IISFHLPTPTPSSISNELLQFSEFVLSKPVLGYIA 64 Query: 76 MANYNTPQLHAYGPGGE--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 + + P L GE R D + W L I +G+ ++RS + Sbjct: 65 DSEKHPPYLKPLTSFGEENRDDPLVTSEGWRRLQEIGIAEGIVALAYERS-----ERWNP 119 Query: 134 KIRAARLYLMAQLEAGHLMSPSVTSASMVALM--------TTPRVHKDWAPKIFSREYDP 185 +I Y + +G + PS + L+ T V K ++ SRE Sbjct: 120 RIHQFVKYHIWSGSSGIVTCPSAMTDGAAKLLGKHLDDDSETKEVFKSARERLISRE--- 176 Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD---------------GIYCLSG 230 + G +TE++GG+D+ + K+SD G + + G Sbjct: 177 ------NGFAWTSGQWMTERKGGSDVRGTETIAVKLSDVQSRDGGLDANGQPLGPWRVDG 230 Query: 231 HKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNR 282 KWF S+ ++ I+LA+ + ++ F P R + + + NG+ QRLKNK+G + Sbjct: 231 FKWFSSATDANMTILLAKTGDNQISAFYAPLRRRVANAANGKTELNGIKIQRLKNKLGTK 290 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 + T E+E +L+G + + + + + + SV LA + +AR R Sbjct: 291 ALPTAEIEIKGMRAYLIGKQGQGVKEISHVLNITRMQNIVSSVGAWGRGLAISRAFARVR 350 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393 +V G +L D P R +A + A LSF +A ++ ++ ++ A Sbjct: 351 NVGGKLLCDVPAHVRGLAQEHVKYTAHMHLSFFIAALLGRSEGSNDTSSAASSIIPQDIN 410 Query: 394 ------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE----ERSIARHYRESPANSIL 443 R++ PI K A + ME +GG GY+E E +IAR +R++ +I Sbjct: 411 RINALYRLLTPIAKAQTALSAINGLRACMESLGGVGYLENEDPELNIARLFRDTNVLAIW 470 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 G+ + M D + ++++G + ++ E+ LG S Sbjct: 471 EGTTDIMADDFMRVVKRGKD-GAKVLEYFEEWLGES 505 >gi|284163450|ref|YP_003401729.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284013105|gb|ADB59056.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 645 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 124/473 (26%), Positives = 202/473 (42%), Gaps = 77/473 (16%) Query: 65 VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSF 124 V+ T + A + + P+L Y GE W++V + R + G+ +F Sbjct: 51 VVGRTIADNADYVDDHGPELEPYDAHGEVWNRVRYPAEQFENDRLAYERGIVAD----AF 106 Query: 125 E-PVVRKQ----AHKIRAARLYLMAQLEAGHLMSPSVTS-ASMVALMTTPRVHKDWAPKI 178 E P+ R + AH + A YL++ + G ++T+ A++V ++ + Sbjct: 107 EAPLDRDEPMPLAHTL--AMQYLLSYADVGFDCPVAMTAGAALVLEKFDDGSLAEYYEAL 164 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSS 237 SREYD + M LTEK+GG+D+ A ++ + G + LSG KWF S+ Sbjct: 165 TSREYDDLIEGAMF---------LTEKQGGSDVGANETRAEYDPESGYWRLSGEKWFCSN 215 Query: 238 PMSDAFIMLAQV----EGRVGC--FLVPR------------------LLEDG-----SPN 268 ++ + LA+ EG G FLVP LEDG + N Sbjct: 216 VDAEGTLALARTPDAPEGTAGLSMFLVPHSDPDSDARPADGPYTKGDRLEDGPLEPEAVN 275 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 Y+RLK+K+G + T E+EF+ FL+G+ + +M L L +A + M Sbjct: 276 DQLYRRLKDKLGTTAVPTGEVEFTGAKAFLVGEEEKGFTQMTEMLNLERLSNAAAACGLM 335 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL---DIAAATALSFRLANSFDEAK- 384 + E+ YA R G + P+M+ + D+ + A T + RL + + A+ Sbjct: 336 GRATLESAIYAANREAFGDTIDRYPLMRADLVDMTVAHEAATAFTFEAARLLSERERAER 395 Query: 385 -------------------SRSEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 S + AY R++ PI K +MA + AME GG+G Sbjct: 396 SARSDDAASADGDAASTTADESADEAYRLMRLLTPIAKLRTGRMAVDTASYAMEIHGGNG 455 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 Y+ + R R++ I G+ N + LDVL LE+ + E L T+E L Sbjct: 456 YVNDFVTNRLLRDAQVLPIWEGTENVLSLDVLRALER-EDAHEPLLETIEDRL 507 >gi|326477649|gb|EGE01659.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97] Length = 618 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 124/487 (25%), Positives = 198/487 (40%), Gaps = 82/487 (16%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102 L + P + K+ V+S + A A N P L +G +R D + Sbjct: 35 LPSPLPPSLEKDFTRFSSLVISKPVLDYAADAERNQPYLKPLSTFGTENKR-DPLVTGEG 93 Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG---HLMSPSVTSA 159 W AL +I +GL P H R ++ G HL +PS Sbjct: 94 WRALQDINIREGLV------GLAPEPGLTGH-----RTQWNTRVSKGIKTHLWTPSS--- 139 Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGG 208 A++T P D A K+ SR D N + + ++A G +TE+ GG Sbjct: 140 ---AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPAIAWTSGQWMTERSGG 196 Query: 209 TDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIMLAQV-EG 251 +D+ + +K++ DG+ + L G KWF S+ ++ IMLA+ E Sbjct: 197 SDVRGTETVARKLTPKEMEEDDGVDSTGMPLGPWRLDGFKWFSSATDANMSIMLAKTGED 256 Query: 252 RVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + F P R ++ P NG+ QRLKNK G ++ T ELE G+L+G Sbjct: 257 SISAFYAPLRRQVKGKDPQESELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQ 316 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + + + I SVS SLA Y++ R SG +L D P R +A + Sbjct: 317 GVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLRDTPSYVRTLARDHV 376 Query: 365 DIAAATALSFRL-----------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 AA+ L+F + A + ++ A R++ P+ K Sbjct: 377 KYAASMHLTFFVVVLLGISEGSNCCSCMAAQINILPRDKNHTLALLRLLTPMAKARTALR 436 Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE--KG 461 A + +ME +GG GY+E +IAR +R++ SI G+ M DV+ +++ KG Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDVMRVVKGSKG 496 Query: 462 TNLFEQL 468 + L Sbjct: 497 PDCLNAL 503 >gi|169598071|ref|XP_001792459.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15] gi|111070363|gb|EAT91483.1| hypothetical protein SNOG_01834 [Phaeosphaeria nodorum SN15] Length = 666 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 107/433 (24%), Positives = 187/433 (43%), Gaps = 82/433 (18%) Query: 177 KIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD------------ 223 K+F+ Y+ T++ P + G +TE+ GG+D++ + ++S Sbjct: 192 KVFTEAYERLTSRDP--NFAWTSGQWMTERAGGSDVSGTETFAHRVSKEYLEQEKKAGRG 249 Query: 224 --------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP--RLLEDGSP----- 267 G + + G KWF S+ S+ ++LA+ +G + F +P R +G+ Sbjct: 250 SDAVGMPLGPWKIDGFKWFSSATDSEMAVLLARTSKGGLSAFYIPMRRRAGEGASATNEQ 309 Query: 268 -------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 NG+ QRLKNK+G +S T ELE + G+L+G + + + L + Sbjct: 310 APPPTELNGIRIQRLKNKLGTKSLPTAELELNGARGWLIGTEGQGVKDISAILNITRLST 369 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------ 374 SV+ LA Y++ R V GG+L D P + +AD + AA +F Sbjct: 370 GAGSVASWSRGLAICRAYSKVRKVRGGLLQDNPAHLKWMADETVKYWAAAHFAFLGVALQ 429 Query: 375 -RLANSFDE-----------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 L +D+ + ++ AA R++ P+ K + + + MEC+GG Sbjct: 430 GSLEQDWDKMVANTRAANLIPRDKAHVAALLRLILPVMKAQVTVASVHGLRQCMECLGGI 489 Query: 423 GYIEER------SIARHYRESPANSILLGSGNAMVLDVLN-LLEK---GTNLFEQLFSTL 472 GY E +IA+ YR++ N I G+ + M DV+ LL+K N+ +F+ Sbjct: 490 GYCENNEDGGLLNIAKIYRDNLVNPIWEGTVSVMAEDVVRVLLDKRLGDGNVLTSIFAPW 549 Query: 473 EQDL-----------GSSGKKVITILRDSISLCKEDKGLAR---FLTEKIALASSAAALY 518 +D+ S ++ + +L D + ++D+ L R L + SS LY Sbjct: 550 VRDVLQHCGFIFATQAESIRRRLQVLIDVVQGARKDELLYRGRESLDHIEVIVSSTTLLY 609 Query: 519 RAGMNDIADVFLE 531 A ++ D F E Sbjct: 610 DATVS--PDPFAE 620 >gi|302502975|ref|XP_003013448.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371] gi|291177012|gb|EFE32808.1| acyl-CoA dehydrogenase, putative [Arthroderma benhamiae CBS 112371] Length = 618 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 120/494 (24%), Positives = 197/494 (39%), Gaps = 96/494 (19%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + P + K+L V+S + A A N P L G + D + W Sbjct: 35 LPSPLPPSLEKDLTRFSSLVISKPVLDFAAEAERNQPYLKPLSTFGIENKQDPLVTGEGW 94 Query: 104 HALLRRSIHDGL-----------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 AL +I +GL H + W+ ++ HL Sbjct: 95 RALQDINIREGLVGLAPEPGLTGHGTQWNTRVSKGIKS-------------------HLW 135 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLG 201 +PS A++T P D A K+ SR D N + + S+A G Sbjct: 136 TPSS------AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPSIAWTSGQW 189 Query: 202 LTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIM 245 +TE+ GG+D+ + +K++ DG+ + L G KWF S+ ++ IM Sbjct: 190 MTERSGGSDVRGTETVARKLTPKEMEEDDGVDSEGMPLGPWRLDGFKWFSSATDANMSIM 249 Query: 246 LAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 LA+ E + F P R ++ P NG+ QRLKNK G ++ T ELE G+ Sbjct: 250 LAKTGEHSISAFYAPLRRQVKGKDPRESELNGVRIQRLKNKFGTKALPTAELEIKGMRGY 309 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 L+G + + + + I SVS SLA Y++ R SG +L D P R Sbjct: 310 LVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTPSYVR 369 Query: 358 AIADIALDIAAATALSFRLANSFDEA-----------------KSRSEEAAYARIMAPIT 400 +A + AA+ L+F + + + + A R++ P+ Sbjct: 370 TLARDHVKYAASMHLTFFIVALLGVSEGSSSSSCMASQTNILPRDNNHTLALLRLLTPMA 429 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLN 456 K A + +ME +GG GY+E +I+R +R++ SI G+ M D++ Sbjct: 430 KARTALRAIKGVRASMENLGGIGYLENEDPILNISRIFRDTCVLSIWEGTTEVMADDLMR 489 Query: 457 LLE--KGTNLFEQL 468 +++ KG + + L Sbjct: 490 VVKGSKGPDCLDAL 503 >gi|326473184|gb|EGD97193.1| hypothetical protein TESG_04607 [Trichophyton tonsurans CBS 112818] Length = 618 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 124/487 (25%), Positives = 198/487 (40%), Gaps = 82/487 (16%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102 L + P + K+ V+S + A A N P L +G +R D + Sbjct: 35 LPSPLPPSLEKDFIRFSSLVISKPVLDYAADAERNQPYLKPLSTFGTENKR-DPLVTGEG 93 Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG---HLMSPSVTSA 159 W AL +I +GL P H R ++ G HL +PS Sbjct: 94 WRALQDINIREGLV------GLAPEPGLTGH-----RTQWNTRVSKGIKTHLWTPSS--- 139 Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGG 208 A++T P D A K+ SR D N + + ++A G +TE+ GG Sbjct: 140 ---AMVTCPGSMTDGAAKLLSRHLDSENGRIFAEALKRLTSRDPAIAWTSGQWMTERSGG 196 Query: 209 TDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIMLAQV-EG 251 +D+ + +K++ DG+ + L G KWF S+ ++ IMLA+ E Sbjct: 197 SDVRGTETVARKLTPKEMEEDDGVDSTGMPLGPWRLDGFKWFSSATDANMSIMLAKTGED 256 Query: 252 RVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + F P R ++ P NG+ QRLKNK G ++ T ELE G+L+G Sbjct: 257 SISAFYAPLRRQVKGKDPQESELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQ 316 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + + + I SVS SLA Y++ R SG +L D P R +A + Sbjct: 317 GVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLRDTPSYVRTLARDHV 376 Query: 365 DIAAATALSFRLAN--SFDEA---------------KSRSEEAAYARIMAPITKYWCCKM 407 AA+ L+F + E + ++ A R++ P+ K Sbjct: 377 KYAASMHLTFFVVALLGISEGSNCCSCMAAQINILPRDKNHTLALLRLLTPMAKARTALR 436 Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE--KG 461 A + +ME +GG GY+E +IAR +R++ SI G+ M DV+ +++ KG Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDVMRVVKGSKG 496 Query: 462 TNLFEQL 468 + L Sbjct: 497 PDCLNAL 503 >gi|303323515|ref|XP_003071749.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111451|gb|EER29604.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 614 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 125/506 (24%), Positives = 208/506 (41%), Gaps = 80/506 (15%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71 +PS S Q P I + DS+ +++ P ++++L VLS Q Sbjct: 2 EPSSSTAGFFQSPPVI-PPSIEDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60 Query: 72 ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 A N P + G + D + W L I +G+ S ++++ Sbjct: 61 SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKA------ 114 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-- 187 + R+Y + L PS A++T P D A + R D N Sbjct: 115 -SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAACLLGRHLDGENGE 164 Query: 188 -------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS-------DGI------ 225 + + S+A G +TE++GG+D+ + +K+S DG+ Sbjct: 165 IFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMP 224 Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQR 274 + + G KWF S+ ++ I+LA+ +G V F P R + G+ NG+ QR Sbjct: 225 LGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQR 284 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 LKNK+G + T ELE +L+G + + + L +AI +VS LA Sbjct: 285 LKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAI 344 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----SFDEAKSRSEEA 390 + YA+ R V +L+D P R +A + AA T L+F +A S + R+ A Sbjct: 345 SKAYAKVRAVRNTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAA 404 Query: 391 -------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARH 433 A R++ P+ K A + ME +GG GY+E +IAR Sbjct: 405 QANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARI 464 Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459 +R++ SI G+ + M DV+ +++ Sbjct: 465 FRDACVLSIWEGTTDIMADDVVRVVK 490 >gi|320035110|gb|EFW17052.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 614 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 125/506 (24%), Positives = 208/506 (41%), Gaps = 80/506 (15%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIA-----NFPSVVHKELELLGEYVLSCTAQ 71 +PS S Q P I + DS+ +++ P ++++L VLS Q Sbjct: 2 EPSSSTAGFFQSPPVI-PPSIEDDSIFRRVVSLHLPNPIPQHLYQDLTQFSNLVLSKPIQ 60 Query: 72 ELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVR 129 A N P + G + D + W L I +G+ S ++++ Sbjct: 61 SHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIVASGYEKA------ 114 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-- 187 + R+Y + L PS A++T P D A + R D N Sbjct: 115 -SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAACLLGRHLDGENGE 164 Query: 188 -------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS-------DGI------ 225 + + S+A G +TE++GG+D+ + +K+S DG+ Sbjct: 165 IFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAEKLETDGVDAHGMP 224 Query: 226 ---YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQR 274 + + G KWF S+ ++ I+LA+ +G V F P R + G+ NG+ QR Sbjct: 225 LGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGGNSETELNGIRIQR 284 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 LKNK+G + T ELE +L+G + + + L +AI +VS LA Sbjct: 285 LKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNAIAAVSYWGRGLAI 344 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----SFDEAKSRSEEA 390 + YA+ R V +L+D P R +A + AA T L+F +A S + R+ A Sbjct: 345 SKAYAKVRAVRNTMLMDMPAHVRKLARDHVKYAANTHLTFLVAALLGVSEGQESGRTPAA 404 Query: 391 -------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARH 433 A R++ P+ K A + ME +GG GY+E +IAR Sbjct: 405 QANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARI 464 Query: 434 YRESPANSILLGSGNAMVLDVLNLLE 459 +R++ SI G+ + M DV+ +++ Sbjct: 465 FRDACVLSIWEGTTDIMADDVVRVVK 490 >gi|296810944|ref|XP_002845810.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480] gi|238843198|gb|EEQ32860.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480] Length = 619 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 198/474 (41%), Gaps = 76/474 (16%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLH---AYGPGGERWDKVEFHPA 102 L + P + ++L + VLS T E A A N P L +G +R D + Sbjct: 35 LPSPLPQSMEQDLTRFSKLVLSRTTLEYAAEAERNQPYLRPLTTFGVENKR-DSLVTSEG 93 Query: 103 WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASM 161 W AL +I +GL P +H I+ R++ + HL +PS Sbjct: 94 WRALQDINIKEGLV------GLSPEPTHTSHSIQWNNRVFKGIKT---HLWTPSS----- 139 Query: 162 VALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTD 210 A++T P D A + S+ D N + + ++A G +TE++GG+D Sbjct: 140 -AMVTCPGSMTDGAASLLSKHLDDENGRIFAEALRRLVSRDPAIAWTSGQWMTERKGGSD 198 Query: 211 IAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253 + + +K++ G + L G KWF S+ ++ IMLA+ E + Sbjct: 199 VRGTETVARKLTAQEMAEDNGVDSAGMPLGPWRLDGFKWFSSATDANMSIMLAKTGENSI 258 Query: 254 GCFLVP-------RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 F P + E+ NG+ QRLKNK G ++ T ELE G+L+G Sbjct: 259 SAFYAPLRRRAKGKDYEETELNGVRIQRLKNKFGTKALPTAELEIKGMRGYLVGKEGQGV 318 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + + ++I +VS SLA Y++ R +G L P R +A + Sbjct: 319 KEISTILNITRTGNSIAAVSYWGRSLAICRAYSKVRITNGRSLQATPSYVRTLAKDHVKY 378 Query: 367 AAATALSFRL------------ANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAP 409 AA+ L+F + A+S K +S A R++ P+ K A Sbjct: 379 AASMHLAFFIVALLGISEGGSSASSMAAQVHIFPKDKSHSLALLRLLTPMAKARTALRAI 438 Query: 410 AVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + +ME +GG GY+E ++AR +R++ SI G+ M D++ +++ Sbjct: 439 KGVRASMENLGGIGYLENEDPMLNVARIFRDTCVLSIWEGTTEVMADDLMRVVK 492 >gi|119188865|ref|XP_001245039.1| hypothetical protein CIMG_04480 [Coccidioides immitis RS] Length = 628 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 128/519 (24%), Positives = 213/519 (41%), Gaps = 82/519 (15%) Query: 6 IYRRLAMNQVH--QPSDSLFALNQPPLFIGMNAYSSDSLL-----VALIANFPSVVHKEL 58 + + L +VH +PS S Q P I + D + + L + P ++++L Sbjct: 3 VAKHLTHFEVHGMEPSSSTAGFFQGPPVI-PPSIEDDGIFRRVVSLHLPSPIPQHLYQDL 61 Query: 59 ELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAWHALLRRSIHDGLH 116 VLS Q A N P + G + D + W L I +G+ Sbjct: 62 TQFSNLVLSKPIQSHIADAERNLPSVKPLTTFGVENKQDSLFTGEGWRTLQDIGIKEGIV 121 Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 S ++++ + R+Y + L PS A++T P D A Sbjct: 122 ASGYEKA-------SGGDLWNNRVYQSLKF---FLWVPSA------AMVTCPSAMTDGAA 165 Query: 177 KIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTDIAAITSQGQKIS--- 222 + R D N + + S+A G +TE++GG+D+ + +K+S Sbjct: 166 CLLGRHLDGENGEIFAEARRRLTSRDPSIAWTSGQWMTERKGGSDVRGTETVARKLSGAE 225 Query: 223 ----DGI---------YCLSGHKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDG 265 DG+ + + G KWF S+ ++ I+LA+ +G V F P R + G Sbjct: 226 KLETDGVDAHGMPLGPWRIDGFKWFSSATDANMTILLAKTSKDGAVSAFYAPLRRRVRGG 285 Query: 266 SP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 + NG+ QRLKNK+G + T ELE +L+G + + + L +A Sbjct: 286 NSETELNGIRIQRLKNKLGTKPVPTAELELKGMRAYLVGKEGQGVKEISTLLNITRLQNA 345 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN--- 378 I +VS LA + YA+ R V +L+D P R +A + AA T L+F +A Sbjct: 346 IAAVSYWGRGLAISKAYAKVRAVRNTMLMDMPAHVRKLAQDHVKYAANTHLTFLVAALLG 405 Query: 379 -SFDEAKSRSEEA-------------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 S + R+ A A R++ P+ K A + ME +GG GY Sbjct: 406 VSEGQESGRTPAAQANIVPQTPQQAHALLRLLTPMVKAQTALRAIKGVRACMENLGGVGY 465 Query: 425 IEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 +E +IAR +R++ SI G+ + M DV+ +++ Sbjct: 466 LENEDPLFNIARIFRDACVLSIWEGTTDIMADDVVRVVK 504 >gi|327439047|dbj|BAK15412.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 550 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 197/424 (46%), Gaps = 42/424 (9%) Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ YL++Q E G ++T M T + + +A + +++ P A Sbjct: 120 AQGYLLSQTEPGFYCPVTLT-------MATAYLLEHYASEELKQKFMPHICATGDTELFE 172 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV-----EG 251 LTE++GG+D+ A + ++ G + L G K+F S+ M ++LA+ +G Sbjct: 173 GATFLTERQGGSDVGANVVEA-RLDQGEWRLYGEKYFASNAGMCGVAMVLARQTTNSKQG 231 Query: 252 RVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G F VP ++G N + +RLK+K+G ++ + E+EF+ +++GD + + Sbjct: 232 SKGLTLFAVPWREDNGELNHITIRRLKDKLGVKAVPSGEVEFNGAKAYVVGDPSKGIYYM 291 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L + +A SV M+ +L EA+HY R G + + P+++ ++ + A+ Sbjct: 292 LEALNLSRICNAAASVGIMKRALDEAVHYTNGRIAFGQKVAEFPMVQHSLGALHAKWHAS 351 Query: 370 TALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 F L + +DE + +E R++ + K + A EA+E GG+GYIE Sbjct: 352 LVALFDLVSRYDEVIGGNASEDEQQIVRLLIALVKKESAEWAIEFTHEAIELHGGNGYIE 411 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-------------FEQLFSTLE 473 + + R R++ ++ G+ N + +++ L++K ++ +QL S +E Sbjct: 412 DFVLPRLLRDAQVLTVWEGTANILAHELIRLVQKNAHITLLHELQQTSHPYLQQLASVVE 471 Query: 474 QDLGSSGKKVITILRDSISLCKED---KGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 Q V L ++ + + LAR +A+ + +A R M +A++++ Sbjct: 472 QRFA-----VFVTLDPAMQTLEAKPLMQQLARLYEAVVAVKHAESAGEREQM--LAEIYI 524 Query: 531 ENRF 534 E +F Sbjct: 525 EEQF 528 >gi|183219648|ref|YP_001837644.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909786|ref|YP_001961341.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774462|gb|ABZ92763.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778070|gb|ABZ96368.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 571 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 57/471 (12%) Query: 17 QPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVV---HK--ELELLGEY------V 65 PS F +++ G N Y D L ++ + HK +E + EY + Sbjct: 8 HPSLQPFDISEYKGLRGKNFYDMDPALQRMVDRYSESFDPKHKLAMVEHIREYGELVGGI 67 Query: 66 LSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGL----HCSIWD 121 L +E + Y ++ Y G+R D +++ + S G+ W+ Sbjct: 68 LDELTEECHKEGKYG--EVVKYDRTGKRIDFIKYSDEQKRARKISYDHGVVNLDFHREWN 125 Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTSASMVAL--MTTPRVHKDWAPKI 178 F H R A YLM G + P ++T ++AL + T K + P + Sbjct: 126 YEF-------THIHRYALTYLMNLNGEGGVACPLAMTDGMILALKKIGTEEQKKKYLPLV 178 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 + D + G +TE+ GG++++A + +K+ +G + L+G KWF S+P Sbjct: 179 AGKGSD---------SHFMAGQYVTERVGGSNVSANRTIAKKLPNGKWELTGEKWFCSNP 229 Query: 239 MSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 D ++ A++EG VG FLVPR+ E+G NG R K+ IG+R TVE+ + Sbjct: 230 -GDLWVTTAKMEGTNTVGMFLVPRIKENGELNGQHILRKKDIIGSRGKITVEIIYDKVEA 288 Query: 297 FLLGDLNVSTGPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G G V ++ +I L + S R S+ EA YA+ R G +++ P Sbjct: 289 EEFG--RPGHGLVNLIRYIIKTSRLHVGLGSCGNARRSVMEASEYAKFRTAYGKKILEFP 346 Query: 354 VMKRAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + +A++ + A ++FR LA D+A A I P+ KY A Sbjct: 347 SFVKTLAEMQILQTANCFVNFRSVGLAEKGDDA---------AEITVPLLKYKSSSQASY 397 Query: 411 VIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +A+ +GG+G I + S + R + +S N G+ + L+ L+K Sbjct: 398 ITQKAILTLGGNGIIGDFSPLPRLHNDSIINETWEGTHLIITDHCLHALQK 448 >gi|327296357|ref|XP_003232873.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892] gi|326465184|gb|EGD90637.1| hypothetical protein TERG_06863 [Trichophyton rubrum CBS 118892] Length = 641 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 119/483 (24%), Positives = 193/483 (39%), Gaps = 94/483 (19%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + P + K+ V+S + A A N P L G + D + W Sbjct: 58 LPSPLPPNLEKDFTRFSSLVISKPVLDYAAEAERNQPYLKPLSTFGIENKQDPLVTGEGW 117 Query: 104 HALLRRSIHDGL-----------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 ALL SI + L H + W+ ++ HL Sbjct: 118 RALLEISIRESLVGLAPEPGLTGHGTQWNTRVSKGIKT-------------------HLW 158 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-----KAPMQKTSV------AIGLG 201 +PS A++T P D A K+ SR D N +A + TS G Sbjct: 159 TPSS------AMVTCPGSMTDGAAKLLSRHLDSKNGRIFAEALKRLTSCDPAIAWTSGQW 212 Query: 202 LTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDAFIM 245 +TE+ GG+D+ + +K++ DG+ + L G KWF S+ ++ I+ Sbjct: 213 MTERSGGSDVRGTETVARKLTPEEMEEDDGVDSVGMPLGPWRLDGFKWFSSATDANMSII 272 Query: 246 LAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 LA+ E + F P R ++ +P NG+ QRLK K G ++ T ELE G+ Sbjct: 273 LAKTGEHSISAFYAPLRRQVKGRNPRESELNGVRIQRLKIKFGTKALPTAELEIKGMRGY 332 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 L+G + + + + I SVS SLA Y++ R SG +L D P R Sbjct: 333 LVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTPSYVR 392 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----------------RIMAPIT 400 +A + AA+ L+F + ++ RS + A R++ P+ Sbjct: 393 TLARDHVKYAASMHLTFFIVALLGISEGRSSSSCMAAQTNILPRDKNSTLALLRLLTPMA 452 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLN 456 K A + +ME +GG GY+E +IAR +R++ SI G+ M D++ Sbjct: 453 KARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDLMR 512 Query: 457 LLE 459 +++ Sbjct: 513 VVK 515 >gi|297183600|gb|ADI19727.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 587 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 152/325 (46%), Gaps = 40/325 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGR------ 252 LTE GTD+ + ++ + SDG Y LSG K F++S +++ I L Sbjct: 164 LTEPVCGTDLGLLKTKAVEQSDGTYKLSGQKIFITSGDHDLTENIIHLVIARSSDSPPGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DGS NG+ +++K+G + +AT L F + G+++G N Sbjct: 224 KGISLFLVPKFLVKDDGSIGSRNGVSTGSIESKMGIKGSATCVLNFDDAIGYMIGPKNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHV----------SGGILIDQ 352 + M ++ L+ ++ + G+ +S A+ Y++ R + +I+ Sbjct: 284 ---LNSMFTMMNLERIVVGIQGLGISEIAYQNALSYSKERKQGQSNNSKSTNAADYIIEH 340 Query: 353 PVMKRAIADIALDIAAATALSFRLAN------SFDEAKSRSEEAAYARIMAPITKYWCCK 406 ++R++ ++ I AL F L+ + ++ K R E + + +M P+ K Sbjct: 341 ADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHNDEKVRQEASDFVSLMTPVVKSMFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464 M + +EAM+ GG GY +++ I + YR++ I G+ + D++ L+ K ++ Sbjct: 401 MGMEITSEAMQIYGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLVNKNGDI 460 Query: 465 FEQLFSTLEQDLGSSGKKVITILRD 489 + ++ D + +K +++ Sbjct: 461 INKYLDMIKNDCNTENEKTKPFIKE 485 >gi|209964932|ref|YP_002297847.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] gi|209958398|gb|ACI99034.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] Length = 598 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 59/340 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE + G+D+ A+ S+ DG Y ++G K F++ D ++LA+ Sbjct: 162 MNLTEPQAGSDVGAVRSRAVPAGDGTYRITGQKIFITYGEHDFTSNIIHMVLARTPDAPP 221 Query: 249 -VEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L DGSP N L L++K+G ++ T + F + GFL+ Sbjct: 222 GVKG-ISLFIVPKFLVNPDGSPGARNDLRCAGLEHKLGIHASPTAVMAFGDNGGATGFLI 280 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI------ 348 G+ N +E M +++A + V V +AE A YA+ R S + Sbjct: 281 GEENRG---IEYM--FTMMNNARLGVGVQGVGIAERAYQQARDYAKTRVQSRALTGRDPG 335 Query: 349 ---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPI 399 +I+ P ++R + I AA ALS+ A++FD AK R A ++ PI Sbjct: 336 PVAIINHPDVRRMLLTAKSQIEAARALSYLTASAFDRAKRHPDAEERRRAKALNDLLTPI 395 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 TK WC + + ++ GG G+IEE A+H R++ I G+ D+ Sbjct: 396 TKAWCTDLGVESASLGVQVHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQANDL----- 450 Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 +F + +D G + +++ +RD+ + K+ G Sbjct: 451 --------VFRKVARDGGETALRLLAEIRDTAAAAKDRPG 482 >gi|126734643|ref|ZP_01750389.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] gi|126715198|gb|EBA12063.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] Length = 568 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/350 (25%), Positives = 163/350 (46%), Gaps = 41/350 (11%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 +SP +T + AL + + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LSPLMTQGQIEALEHHASDAIKELYIPKMISGEWSGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VEGRVGC--FLV 258 D+ A+ S+ + DG Y ++G K ++S +D ++LA+ V G G F+V Sbjct: 171 DVGALRSKAEPNGDGTYAITGQKIYISWADNDFTQNVCHLVLARLPDGVPGTKGISLFMV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+L+ D G+ N L L++K+G + T +E++ G+L+G + + M Sbjct: 231 PKLIPDADGNPGAKNDLRVVSLEHKMGLHGSPTAVMEYAGAKGWLVGREHGGMAAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG--GILIDQPVMKRAIADIALDIAA 368 L + V +L A+ YA+ R SG G +ID ++R + + D A Sbjct: 291 NNARLGVGVQGVGAAEGALQHALAYAKDRKQGKTSGITGTIIDHADVRRMLTTMKADTYA 350 Query: 369 ATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A++ A + D A + +E AR + PI+K + + V A ++ GG G++E Sbjct: 351 ARAITLMNAVAIDMAHASGDEGWKARAAFLTPISKAFGSDVGCEVSATGIQVHGGMGFVE 410 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474 E A++ R+ +I G+ +D++ L++ G F ++ +EQ Sbjct: 411 ETGAAQYARDVRVTTIYEGTNGIQAMDLVARKLMDGGEAAF-RILEEIEQ 459 >gi|320450348|ref|YP_004202444.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320150517|gb|ADW21895.1| acyl-CoA dehydrogenase, short-chain specific [Thermus scotoductus SA-01] Length = 515 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 117/448 (26%), Positives = 197/448 (43%), Gaps = 55/448 (12%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKEL----ELLGEYVLSCTAQELARMANYNTP-QLHA 86 G + Y DS L A++ F P + +EL +L+GE VL E+A + + P +L Sbjct: 9 GEDHYKLDSDLKAILDTFAPGLPQEELSAFGKLVGEEVL-----EVAHHVDQDAPPRLQM 63 Query: 87 YGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 + G+R D+ PA LL + L I P + + A YL+A Sbjct: 64 HDLDGKRIDRALLSPAQKILLEK-----LRPMI-----RPAYEGRGWPLHYAFGYLLA-- 111 Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LT 203 + G ++T AL HK Y P ++ ++ G +T Sbjct: 112 DGGLYCILTITHQVAYAL------HK----------YAPEHEGVKRELLYGPAFGATWMT 155 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256 E +GG+D+ A + ++ + G K+F S + ++D I+ A+ EG +G F Sbjct: 156 EIQGGSDLGANRTVARQEGNAYRLYQGDKYFASGAGLADYAIVTARPEGAPAGPKGLGLF 215 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+PR +E G N +R K K+ R+ + E+E + + +G L + + Sbjct: 216 LLPREVE-GRLN-FTVRRFKEKLATRAVPSGEVELEGSLAYPIGRLEEGIYYTLENLTVS 273 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L +A ++ + + EA+ RRR G L+ +++ + ++ L TAL F Sbjct: 274 RLANAAAAMGIAKKAHLEALFRVRRRTAFGKTLLQHDLIQHDLLEMRLRQVGGTALGFLA 333 Query: 377 ANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +FD+A SE AR+++ + K + A A+ A AME GG G++EE +AR Sbjct: 334 IQAFDQAWEERPPYSEGYHLARLLSHLAKGRTAEHASAITALAMELFGGLGFLEEYGVAR 393 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 +RE+ I G N LD+L + K Sbjct: 394 WHREALITPIWEGPANIQALDMLEAILK 421 >gi|225677980|gb|EEH16264.1| hypothetical protein PABG_06351 [Paracoccidioides brasiliensis Pb03] Length = 618 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 46/307 (14%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDA 242 G +TE++GG+D+ + G+K+S G + L G KWF S+ ++ Sbjct: 187 GQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNPLGPWQLDGFKWFSSATDANM 246 Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293 IMLA+ +G++ F P R + G+ NG+ QRLKNK+G ++ T ELE Sbjct: 247 TIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKG 306 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G+L+G + + + + I +V G +LA + YAR R G +L D P Sbjct: 307 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 366 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396 RA+A + A L+F +A+ ++ + + +A R++ Sbjct: 367 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLATRASILPTDAQQASALLRLL 426 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452 P+ K A + ME +GG GY+E ++AR +R++ SI G+ + M Sbjct: 427 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVARIFRDTCVVSIWEGTTDIMAD 486 Query: 453 DVLNLLE 459 D++ +++ Sbjct: 487 DLVRVIK 493 >gi|242213407|ref|XP_002472532.1| predicted protein [Postia placenta Mad-698-R] gi|220728423|gb|EED82318.1| predicted protein [Postia placenta Mad-698-R] Length = 495 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 114/451 (25%), Positives = 184/451 (40%), Gaps = 64/451 (14%) Query: 27 QPPLFIGMNAYSSDSLLVALIAN-FPSVVHKELEL----LGEYV---LSCTAQELARMAN 78 QP F+ + Y++D L L+ FP V +++E G+ V +S +Q + Sbjct: 8 QPASFVEGHPYTTDPALPGLLKRLFPPTVLQDVEADLIHFGDIVETRMSVLSQLV----- 62 Query: 79 YNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA 138 P+L Y G+R D+++ W L +G+ ++R R AH Sbjct: 63 -EPPRLVQYNQWGQRVDELQTSEGWRGLKALFHEEGIVGIFYERRNREFSR--AHGFAKI 119 Query: 139 RL-----YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 L ++ + GH++ S + H W P Q+ Sbjct: 120 LLAIGDSQVVCDIANGHIIRNDKNDTSYINQFKLSNEHDRWL-------------CPGQQ 166 Query: 194 TSVAIGLGLTEKRGGT--DIAAITSQ--GQKISDGIYCLSGHKWFLSSPMSDAFIMLA-- 247 + + LTE + A+ T GQK Y L KWF S+ S+ + LA Sbjct: 167 RAGGSDVSLTETLASPVPETASTTPSHYGQK-----YTLDRFKWFSSATDSNFALALART 221 Query: 248 --QVEGR--VGCFLVPRLL----EDGSP------NGLCYQRLKNKIGNRSNATVELEFSN 293 Q +G + FLVP L E G+P N + RLKNK+G ++ T EL Sbjct: 222 GSQADGSRALSLFLVPLRLPMFREPGAPRPPSTSNNVFVHRLKNKVGTQALPTAELSLEG 281 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--ILID 351 G+L+G+ + + + L SA SV +R LA Y+R R + GG +L D Sbjct: 282 AEGYLIGEPGQGVKLITPVLNITRLHSATTSVGSLRRCLAIVTAYSRVRAIKGGAQLLKD 341 Query: 352 QPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 P+ +A +++ A + F L + + EEA R++ P K + + A Sbjct: 342 TPLHVAELAKVSVLYRALVHMLFGTISLLGKTECGVAHEEEALRLRLLTPAIKAFAAEKA 401 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E M +GG+GY+ E I R ++S A Sbjct: 402 CTAMEECMAALGGAGYMSENEIGRAVKKSTA 432 >gi|296411298|ref|XP_002835370.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629149|emb|CAZ79527.1| unnamed protein product [Tuber melanosporum] Length = 685 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 121/522 (23%), Positives = 220/522 (42%), Gaps = 73/522 (13%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD 113 +HKEL+ L LS A + P L ++ R D + W L H Sbjct: 79 LHKELDSLAVAALSPQVLHWVEDAEAHPPTLESHDAFANRSDTLRTSEGWRRLAELGAHQ 138 Query: 114 GLHCSIWDRSFEPVVRKQAHKIRAARLYLM----------AQLEAGHLMSPSVTSASMVA 163 G+ ++ + + + + I + L A+L + H+ P+ + S + Sbjct: 139 GIVAEGYEGRYGRIGQFAKYYIFSPSSALTTCPFAMTDGAARLLSQHIPHPATSIQSFFS 198 Query: 164 LMTTPRVHKDWAPK---IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA-----AIT 215 L + ++ K ++ + ++ Q G +TE+ GG+D++ A+ Sbjct: 199 LNCSLSSRREAEAKRQVFYNAHFRLISRD--QSARWTSGQWMTERSGGSDVSRSETVAVY 256 Query: 216 SQ---GQKISDGI-----YCLSGHKWFLSSPMSDAFIMLAQVEGRVG---CFLVPRLLED 264 S +I DG + + G+K+F S+ +D I+LA+ G G F P L + Sbjct: 257 SPLAPSSQIEDGTEELGPWVIDGYKFFSSATDADMTILLARTPGGGGKPSAFYAPMRLAN 316 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G NG+ RLK K+G R+ T ELE +++G+ + + + + +A+ + Sbjct: 317 GERNGVRIMRLKRKLGTRALPTAELELKGMRAWMIGEEGEGIKQIATVLNITRVHNAVSA 376 Query: 325 VSGMRVSLAEAIHYARRRHVS-GGILIDQPVMKRAIADIALDIAAATALSF------RLA 377 +S MR LA A +++ R V+ L P+ R +A + L A T L+F L+ Sbjct: 377 ISFMRRGLAIAKAFSKVRVVARNRPLWTIPLHLRTLAHLELYQRATTHLAFFTIHLLSLS 436 Query: 378 NSFDEAKSRSEEAAYA-----------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + + S A+ R++ PI K K+A + ++E E +GG GY E Sbjct: 437 ETSAAPSTPSPNASSPLHTPSTPHQLLRLLTPIAKALTAKLAMSTLSECAESLGGVGYCE 496 Query: 427 ER---SIARHYRESPANSILLGSGNAMVLDVLNLL---------EKGTNLFEQLFSTLEQ 474 +IAR R++ SI G+ N +V D+++ L E+G F + +E+ Sbjct: 497 NEEPLNIARLLRDAQVLSIWEGTTNVLVTDLISSLKRTSRAGGEEQGWVPFNEF---VEE 553 Query: 475 DLGSSGKKVITIL---------RDSISLCKEDKGLARFLTEK 507 +LGS +++ R ++L +E K + L + Sbjct: 554 NLGSPATATTSLVGEVEAEILERCKVALWEEWKEFEKILETR 595 >gi|226287271|gb|EEH42784.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18] Length = 618 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 46/307 (14%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDA 242 G +TE++GG+D+ + G+K+S G + L G KWF S+ ++ Sbjct: 187 GQWMTERKGGSDVRGTETVGRKLSAEEQSASNGVDSLGNPLGPWQLDGFKWFSSATDANM 246 Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293 IMLA+ +G++ F P R + G+ NG+ QRLKNK+G ++ T ELE Sbjct: 247 TIMLAKTGPDGQISAFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKG 306 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G+L+G + + + + I +V G +LA + YAR R G +L D P Sbjct: 307 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 366 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396 RA+A + A L+F +A+ ++ + + +A R++ Sbjct: 367 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSCLTLATRASILPTDAQQASALLRLL 426 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452 P+ K A + ME +GG GY+E ++AR +R++ SI G+ + M Sbjct: 427 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDTLFNVARIFRDTCVVSIWEGTTDIMAD 486 Query: 453 DVLNLLE 459 D + +++ Sbjct: 487 DFVRVIK 493 >gi|13475804|ref|NP_107374.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] gi|14026563|dbj|BAB53160.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] Length = 583 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 69/401 (17%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+ +P + + + K+ S ++ T + LTE + G+ Sbjct: 118 LCPLLTDGAIEALLRFGSPEIQQTYLHKLVSGKWTGT-------------MNLTESQAGS 164 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A I ++ ++ ++G Y +SG K F++ D ++LA+ G + FLV Sbjct: 165 DLALIRTRAERQANGTYQISGTKIFITYGEHDLAENIIHLVLARTPGAPDGVKGISLFLV 224 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+LL E G+ N L Q +++K+G R++ T LEF GFL+G N +E M Sbjct: 225 PKLLVGESGEPGAQNSLRCQSIEHKLGVRASPTCMLEFEGATGFLIGRENAG---LEIM- 280 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH----VSGGI-----LIDQPVMKRAI 359 +++A +V V++AE A+ YA+ R V G +I P ++R + Sbjct: 281 -FTMMNAARFAVGVQGVAIAERAYQMALSYAKTRMQGRPVDGSAFEAVPIIRHPDVRRML 339 Query: 360 ADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIA 413 A + AL+ A D A+ R+E A + P+ K +C +M+ + Sbjct: 340 AHMRATTEGGRALAAAAAGWQDRAQFAATPELRAEALAIGEFLVPLVKGFCTEMSLQTAS 399 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 ++ GG G+IEE +A++YR++ I G+ D+L TL Sbjct: 400 TGVQIFGGMGFIEETGVAQYYRDARILPIYEGTTAIQANDLLGR------------KTL- 446 Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 +D GS+ +++ ++ + + ++ LA+ + +++ A A Sbjct: 447 RDGGSTARRLAAMITQTETALRQGSPLAQEIAAQLSCARQA 487 >gi|145537093|ref|XP_001454263.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422018|emb|CAK86866.1| unnamed protein product [Paramecium tetraurelia] Length = 599 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 16/276 (5%) Query: 199 GLGLTEKRGGTDIA-AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRV-- 253 G +TEK GG+D+ + T+ Y L G+KWF S+ S+ + LA+V E ++ Sbjct: 187 GQWMTEKDGGSDVNNSTTTIAVHQGGNKYKLYGYKWFSSATDSEMTLALARVVPEKKIED 246 Query: 254 ------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F++ +DG+ N + +K+K+G R T EL + +L+ + Sbjct: 247 FRKYPLSLFIMRVKKDDGTLNNIKIMTMKDKMGTRQLPTAELLLQGSEAYLISEEGKGVK 306 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + M + L +A +V M + ++Y+ +R G LI++P + + L++ Sbjct: 307 GISQMLNVTRLYNASSAVGSMNRLYSIVVNYSLKRKAFGKELIEKPAHQTMLTKFNLNVR 366 Query: 368 AATALSFRLANSF----DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A + F++A F + A ++ +E + RI+ P+ K + K+ ++E +E +G G Sbjct: 367 ACSLFYFKVAQLFSKIQNNAATKDDEEMF-RILTPLLKLYTAKICMYWMSEGIEALGALG 425 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 Y+E I R++ +I G+ N + LD L L+ Sbjct: 426 YMENSYIPLMLRDAQVLTIWEGTTNVLCLDFLRALK 461 >gi|295663895|ref|XP_002792500.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] gi|226279170|gb|EEH34736.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] Length = 628 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 46/307 (14%) Query: 199 GLGLTEKRGGTDIAA-------ITSQGQKISDGI---------YCLSGHKWFLSSPMSDA 242 G +TE++GG+D+ +++ Q SDG+ + L G KWF S+ ++ Sbjct: 193 GQWMTERKGGSDVRGTETVARKFSAEEQSASDGVDSLGNPLGPWQLDGFKWFSSATDANM 252 Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293 IMLA+ +G++ F P R + G+ NG+ QRLKNK+G ++ T ELE Sbjct: 253 TIMLAKTGPDGQISAFYAPLRRKVPGGTEGETELNGVRIQRLKNKLGTKTLPTAELELKG 312 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G+L+G + + + + I +V G +LA + YAR R G +L D P Sbjct: 313 MRGYLIGKQGEGVKEISTILNITRFHNIIGAVGGWGRALAISRAYARVRVSGGRLLTDIP 372 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSR-----------------SEEAAYARIM 396 RA+A + A L+F +A+ ++ + + +A R++ Sbjct: 373 AHVRALARDHVMYRAQMHLAFLVASLLGISEGQDSRLTLATRASILPTDAQQASALLRLL 432 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452 P+ K A + ME +GG GY+E ++AR +R++ SI G+ + M Sbjct: 433 TPMAKAQTALRAIHGVRACMESLGGVGYLENEDPLFNVARIFRDTCVVSIWEGTTDIMAD 492 Query: 453 DVLNLLE 459 D + +++ Sbjct: 493 DFVRVIK 499 >gi|83949836|ref|ZP_00958569.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] gi|83837735|gb|EAP77031.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] Length = 591 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 106/433 (24%), Positives = 182/433 (42%), Gaps = 68/433 (15%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + + T + + PK+FS ++ T + LTE GTD+ + S+ Sbjct: 132 AASAILVHGTDQQKDTYLPKMFSCDWTGT-------------MNLTEPHCGTDLGLMRSK 178 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG------RVGCFLVPRLL--ED 264 DG Y +SG K F+S+ D ++LA++ G V F+VP+ L ED Sbjct: 179 AVPQDDGSYAISGQKIFISAGEHDMAENIIHLVLAKIPGGPEGIKGVSLFIVPKFLVKED 238 Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 GS NG+ +++ K+G N+T +++ G+LLG+ + + M + Sbjct: 239 GSLGERNGVKCSKIEEKMGIHGNSTCVMDYDGAKGWLLGEEHKGMRAMFTMMNEARIGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAA 369 + ++ V+ A+ YAR R V+G LI P ++R + D I A Sbjct: 299 MQGLAQAEVAYQNALDYARDRLQGRSVTGVENPDGPADPLIVHPDIRRNLLDQKSFIEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D A+ +EAA+ + + P+ K + + +A + GG GYIEE Sbjct: 359 RAFLLWGAQMIDRAERGKDEAAHGMVSLLTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 +++ R++ I G+ LD++ L QD G ++ Sbjct: 419 TGMSQFTRDARIAMIYEGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLV 465 Query: 488 RDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHG 547 + I D +A F TE L S++ L AGM F++N + + L G Sbjct: 466 KGFIKEAGTDGAMAEF-TEP--LKSASKDLQSAGM-----FFMQN----GMKNPNAALAG 513 Query: 548 RFNAAHIIDSLYL 560 ++ H+ + L Sbjct: 514 SYDFMHLFGHVCL 526 >gi|293604778|ref|ZP_06687177.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292816829|gb|EFF75911.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 589 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 57/364 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T+ ++ AL+T +P + K + + S ++ T + LTE + G+ Sbjct: 124 LCPLLTNGAIEALLTAGSPELKKRFIGPMISGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+A I ++ Q + DG Y LSG K F++ D ++LA++ EG G FLV Sbjct: 171 DLAMIRTRAQPVGDGTYRLSGTKIFITYGDHDLTENILHLVLARLPDAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G+L+G N ++ Sbjct: 231 PKFLVNEDGSLGARNDVTCVSIEHKLGIKASPTATLQFGDAGGALGYLVGQENRG---LD 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKR- 357 M I++ + V G+ ++ LA A + R V G +I P ++R Sbjct: 288 AMFIMMNAARYAVGVQGIAIADRAYQHALAYAAERVQSRPVDGSSREAVTIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + +A TA LA++ +A R A + PI K WC +M+ V Sbjct: 348 LGTMRALTEAGRALAYVTAGHADLAHASPDADERKRHLAIQEFLVPIVKGWCTEMSIDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLIGRKTLRDGGAVAQGLLD 467 Query: 471 TLEQ 474 + Q Sbjct: 468 AIRQ 471 >gi|116327391|ref|YP_797111.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331995|ref|YP_801713.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120135|gb|ABJ78178.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125684|gb|ABJ76955.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 563 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 117/460 (25%), Positives = 199/460 (43%), Gaps = 53/460 (11%) Query: 12 MNQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPS---VVHKE--LELLGEY-- 64 +NQ P + F ++ G N Y D +L AL+ + V HK+ +E L Y Sbjct: 5 LNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIGYGA 64 Query: 65 ----VLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GL---- 115 VL + + Y ++ Y G R D V + L R+ +D G+ Sbjct: 65 LVGGVLDELTEASHKEGKYG--EVVKYDRTGNRIDAVMYSNE-QKLSRKISYDYGIVNLN 121 Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHK 172 + S W F + R A YL Q G + P + M+ ++ TP Sbjct: 122 YHSSWKHPFTDLHR-------YALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTPEQKD 174 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + + D + G +TE+ GG++++A + +K +G + L+G K Sbjct: 175 KYLSLVAGEGSD---------SHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEK 225 Query: 233 WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 WF S+P D ++ A+VE +G FLVPR+ +DG+ NG R K+ IG+R TVE+ Sbjct: 226 WFCSNP-GDLWVTTARVEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEII 284 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV--SGM-RVSLAEAIHYARRRHVSGG 347 + LG + G MK +I + +S+ SG+ R + EA YA+ R G Sbjct: 285 YDGVEAEALG--RPAHGIANLMKYVIGISRLHVSLAASGISRRAWMEAYEYAKFRTAYGS 342 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 +++ + + ++D L A FR ++ + K E I+AP+ KY C Sbjct: 343 KILEFSSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGE------ILAPLLKYKCSAT 396 Query: 408 APAVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGS 446 + + ++ +GG+G + + S + R + +S N G+ Sbjct: 397 STEITYNSILVLGGNGIVGDFSALPRLHNDSIINETWEGT 436 >gi|317031932|ref|XP_001393689.2| hypothetical protein ANI_1_1336084 [Aspergillus niger CBS 513.88] Length = 650 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 50/317 (15%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----------------GIYCLSGHKWFL 235 K + G +TE++GG+D+ + ++++ G + + G KWF Sbjct: 201 KVAWTSGQWMTERKGGSDVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFS 260 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286 S+ S+ +MLAQ + F P D NG+ QRLKNK+G + T Sbjct: 261 SATDSEMTVMLAQTTKGLSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPT 320 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ELE G+L+G+ V + + L +A S +G LA Y R R V G Sbjct: 321 AELELKGVRGWLIGEEGRGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQG 380 Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDE---------------AKSRSE 388 +L D P R +A + AAA F L S ++ + R + Sbjct: 381 SLLEDIPQHVRWMAGETVKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQ 440 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSI 442 A R++ P K + + E ME +GG GY E ++AR +R++ N I Sbjct: 441 AATLLRLITPALKALSSVGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPI 500 Query: 443 LLGSGNAMVLDVLNLLE 459 G+ + M DV+ +++ Sbjct: 501 WEGTVSVMAEDVVRVIK 517 >gi|134078234|emb|CAK96815.1| unnamed protein product [Aspergillus niger] Length = 672 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 50/317 (15%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISD-----------------GIYCLSGHKWFL 235 K + G +TE++GG+D+ + ++++ G + + G KWF Sbjct: 223 KVAWTSGQWMTERKGGSDVRGTETIARRLTREELLQEASHHDAHGMPLGPWRIDGFKWFS 282 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286 S+ S+ +MLAQ + F P D NG+ QRLKNK+G + T Sbjct: 283 SATDSEMTVMLAQTTKGLSLFYAPVRRRAGRSASSSSDTELNGIRLQRLKNKVGTKQLPT 342 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ELE G+L+G+ V + + L +A S +G LA Y R R V G Sbjct: 343 AELELKGVRGWLIGEEGRGVKEVATILNITRLYTAAGSTAGWGRGLAICRAYTRARKVQG 402 Query: 347 GILIDQPVMKRAIADIALDIAAATALSF---RLANSFDE---------------AKSRSE 388 +L D P R +A + AAA F L S ++ + R + Sbjct: 403 SLLEDIPQHVRWMAGETVKYAAAMHWVFFGIALQGSVEQEWDLMVRNTKAAAIIPRDRKQ 462 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSI 442 A R++ P K + + E ME +GG GY E ++AR +R++ N I Sbjct: 463 AATLLRLITPALKALSSVGSVQGLRECMEGLGGVGYCENNEDGGILNVARIFRDTLVNPI 522 Query: 443 LLGSGNAMVLDVLNLLE 459 G+ + M DV+ +++ Sbjct: 523 WEGTVSVMAEDVVRVIK 539 >gi|297180334|gb|ADI16552.1| acyl-CoA dehydrogenases [uncultured bacterium HF4000_009C18] Length = 589 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 79/341 (23%), Positives = 156/341 (45%), Gaps = 47/341 (13%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K + PKI ++ T + LTE GTD+ + ++ + SDG + LS Sbjct: 145 IKKKFLPKIVEGKWSGT-------------MCLTEPVCGTDLGLLKTKATEQSDGSFKLS 191 Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQ 273 G K F++S D ++LA+ + FLVP++ EDGS NG+ Sbjct: 192 GQKIFITSGDHDLTENIIHLVLARTSDAPSGTKGISLFLVPKVQVKEDGSLGPRNGVSTG 251 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 +++K+G + ++T L F G+++G N + M L + I ++ ++ Sbjct: 252 SIESKMGIKGSSTCVLNFDEAIGYMIGSKNKGLSSMFTMMNLERIVVGIQALGISEIAYQ 311 Query: 334 EAIHYARRRHVS----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381 A++Y++ R ++ID ++R++ + I ALSF LA + Sbjct: 312 NALNYSKERKQGKSNNSKTANGADLIIDHADIRRSLLSMKSIIEGERALSFWLAQQIEVS 371 Query: 382 ----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K + E + +M P+ K M + ++AM+ GG GY +++ I + YR++ Sbjct: 372 LHHSDNKIKQEASDLVSLMTPVVKSLFTDMGMEITSDAMQIFGGYGYTKDQGIEQLYRDN 431 Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476 I G+ +A +D++ L+ K ++ ++ +E+++ Sbjct: 432 RITPIYEGTNSAQSIDLVFRKLINKDGSVIDRYIKFIEEEI 472 >gi|225562669|gb|EEH10948.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR] Length = 615 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 119/499 (23%), Positives = 201/499 (40%), Gaps = 93/499 (18%) Query: 28 PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 PP ++ A+ + + L + PS + ++L VLS + A A N P L Sbjct: 18 PPQYVEDAAFRR-IISLYLPSPIPSSIDEDLSRFSRLVLSRSHMAYAADAEKNQPYLRPL 76 Query: 88 GPGG--ERWDKVEFHPAWHALLRRSIHDGL--------HCSIWDRSFEPVVRKQAHKIRA 137 G + D + W L R I +G+ S W+ Sbjct: 77 STFGTENKQDPLVTSEGWRKLQYRGIEEGMVGIAYANARGSPWNN--------------- 121 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT--- 194 R Y +L HL + S AL+T P D A K+ R + N + + Sbjct: 122 -RAYQFIKL---HLWTSSA------ALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNR 171 Query: 195 ------SVAI--GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSG 230 SVA G +TE++GG+D+ + +K+S G + L G Sbjct: 172 LISRDPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCPLGPWQLDG 231 Query: 231 HKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGN 281 KWF S+ ++ IMLA+ +G++ F P R + G+ NG+ QRLKNK+G Sbjct: 232 FKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGT 291 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 ++ T ELE G+L+G + + + + + +V G LA + YA+ Sbjct: 292 KALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKV 351 Query: 342 RHVSGGILIDQP----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS---- 387 R G +L + P VM R + +A +A+ +S + +A S Sbjct: 352 RIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQATQASILPT 411 Query: 388 ---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPAN 440 + A R++ P+ K + + ME +GG GY+E ++AR +R+ Sbjct: 412 NAEQSGALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVL 471 Query: 441 SILLGSGNAMVLDVLNLLE 459 SI G+ + M D++ +++ Sbjct: 472 SIWEGTTDIMADDLVRVMK 490 >gi|322710100|gb|EFZ01675.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23] Length = 530 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 58/339 (17%) Query: 177 KIFSREYDP-TNKAPMQKTSVAIGLGLTEKRGGTDIA--------------AITSQGQKI 221 K+F+ Y T++ P K + G +TE+ GG+D++ S+ +I Sbjct: 65 KVFTDAYKRLTSRDP--KYAWTSGQWMTERTGGSDVSLTETVATYQPEGANGFASKQGQI 122 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLED-------GSP------ 267 G + ++G KWF S+ S+ ++LA+ G + FL P D G P Sbjct: 123 PLGPWSINGFKWFSSATDSEMTVLLARTAAGGLSTFLAPMRKHDPEATTLTGEPKDDGRA 182 Query: 268 -NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 NG+ QRLKNK G +S T EL N G+++G + + L + SA+ +V Sbjct: 183 LNGVRIQRLKNKFGTQSLPTAELVLDNMRGWMVGREGRGIHEISTILTLTRVHSAVAAVG 242 Query: 327 GMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADIALDIAAATALSFRLA---- 377 G+ L A YA R V G L+D P+ R +A I+ + ++F + Sbjct: 243 GVGRGLGIARAYALVRDVGAGGRKRTRLVDSPLHMRTLAKISAEYRRLMLVTFYTSYVLG 302 Query: 378 ---NSFDEAKSRSEEA---------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 +S D S + +A RIM+ + K + CK + A++ ME +GG GY+ Sbjct: 303 VSEHSLDARPSPALDALTPQGKLVEPLLRIMSQLAKAYVCKPSVALLFSCMEALGGVGYL 362 Query: 426 --EER---SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 EE+ +I+R YR++ I G+ + + D++ ++ Sbjct: 363 VNEEQEYLNISRIYRDTCVLPIWEGTTDVLCTDLIRAMK 401 >gi|114569386|ref|YP_756066.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris MCS10] gi|114339848|gb|ABI65128.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10] Length = 585 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 99/411 (24%), Positives = 182/411 (44%), Gaps = 73/411 (17%) Query: 136 RAARLYLMAQLEAGHL---MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAP 190 RA + ++ ++ +L + P +T ++ AL+ T + PK+ + E+ T Sbjct: 105 RALGVTVLEMIQGSNLSFGLGPMLTYGAIEALIEHGTDEQKAMYLPKLITGEWSGT---- 160 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIM 245 + LTE G+D+ A+ ++ + DG + +SG K F++ D ++ Sbjct: 161 ---------MNLTEPSAGSDVGALRTKAEPNPDGSWAISGQKIFITWGDHDCAENIIHLV 211 Query: 246 LAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 LA+ G + F+VP++L DGS N L L++K+G + T +E++ G+L+ Sbjct: 212 LARTPGSPDGTKGISLFIVPKVLPDGSANSLKAIGLEHKLGIHGSPTCTMEYAGATGWLI 271 Query: 300 GDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI----- 348 G N M+ + ++SA ++V V +AE A+ YA R I Sbjct: 272 GGENAG------MRCMFTMMNSARLNVGVQGVGIAERAYQQALAYASDRKQGRAIDAEGP 325 Query: 349 ----LIDQPVMKRAIA------DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +I P +KR ++ A I + A++ LA DE + ++ ++ P Sbjct: 326 APHAIIHHPDIKRTLSLMKAKIAAARAICVSCAVAADLAYHGDEDEEKAAAKRREELLTP 385 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456 I K W + V + ++ GG GYIEE A+H R++ I G+ +D++ Sbjct: 386 IAKAWSTDVGVEVASANIQVHGGMGYIEETGAAQHLRDARITPIYEGTNAIQAIDLVGRK 445 Query: 457 LLEKGTNLFEQLFSTLEQ-----------DLGSSGKKVITILRDSISLCKE 496 L F++L++ ++Q DL G++ LRDS+ +E Sbjct: 446 LSMADGAAFDELYADIDQTIESCLTSSHPDLPPLGER----LRDSLEALQE 492 >gi|152981179|ref|YP_001352277.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] gi|151281256|gb|ABR89666.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] Length = 596 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 60/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ ALMT + + + + P + ++ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALMTAGSDQQKEKFLPNFIAGKWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+A + S+ DG Y +SG K F++ D ++LA+ EG G FLV Sbjct: 171 DLALVRSRAVPQGDGTYKISGTKIFITYGEHDMAENIIHLVLARTPDAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 P+ L EDGS + C +++K+G +++ T L+F + G L+G N + Sbjct: 231 PKFLVNEDGSLGERNDAFCVS-IEHKLGIKASPTAVLQFGDHGGAIGTLIGQENRG---L 286 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMK 356 E M I +++A +V +S+AE A+ YA+ R S + +I QP ++ Sbjct: 287 ETM--FIMMNAARFAVGIQGISVAERAYQKAVAYAKDRVQSKDLEGSATAVSIIHQPDVR 344 Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R + + I AA AL++ A++FD + K R + A+ + PI K W +M+ Sbjct: 345 RMLMSMRAQIEAARALAYVGASAFDIAHHHGDEKVRDAQQAFYEFLVPIIKGWSTEMSID 404 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 405 VASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGT 440 >gi|321474240|gb|EFX85205.1| hypothetical protein DAPPUDRAFT_300359 [Daphnia pulex] Length = 621 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 119/448 (26%), Positives = 194/448 (43%), Gaps = 37/448 (8%) Query: 35 NAYSSDSLLV-----ALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N++ D+LL L A S V EL + G V + +L R P L Sbjct: 53 NSFEGDTLLQRNLQRILPAEAYSNVKDELSMFGARV-ATDIYKLGRECELIPPYLKLQDA 111 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 +KV +W L + S +GL ++R +P + + I+ ++ YL A Sbjct: 112 WANPQNKVVTCESWKELKKISAREGLISLAYER--DPKHQGFSRLIQMSKNYLFAPSSGL 169 Query: 150 HLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 + ++T + L ++ + H + + SR DP + G +TEKRGG Sbjct: 170 YSCPLAMTDGAAKTLEVSGLKDHGESFKNLTSR--DP-------EKFWTSGQWMTEKRGG 220 Query: 209 TDIAAITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQV---------EGRVGC 255 +D+A T + I D +Y L G+K+F S+ +D + LA+V G G Sbjct: 221 SDVAGGT-ETLAIQDPNKENMYKLYGYKFFSSATDADIALTLARVVDPATGKITSGTKGL 279 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L L+ P+ L RLK K+G + T EL L+ + M + Sbjct: 280 SLF--LIYVDQPSNLHLMRLKQKLGTKQLPTGELLLDGMTAELISPPGRGVASISQMLNI 337 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL--- 372 L +A SVS MR ++ A Y+ RR G ++ + P+ R +AD+ L+ A +L Sbjct: 338 TRLHNASASVSAMRRIISLARDYSNRRVAFGKLIRNHPLHVRTLADMELECRAGFSLFME 397 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + RL + + E+ R++ P+ K + K V++E +E GG GY+E+ I Sbjct: 398 AGRLLSLEENGTPTIEQQQLLRLLLPLLKLYTGKQCMKVVSEGLESFGGQGYMEDTGIPV 457 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 R++ I G+ N + LDVL L K Sbjct: 458 ILRDAQVTPIWEGTTNILSLDVLRALAK 485 >gi|322698381|gb|EFY90152.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102] Length = 530 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 67/366 (18%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 GHL P ++++ VA +V D ++ SR DP K + G +TE+ GG Sbjct: 48 GHLSQPKLSASLSVA---ERKVFTDAYRRLTSR--DP-------KYAWTSGQWMTERTGG 95 Query: 209 TDIA--------------AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRV 253 +D++ S+ +I G + ++G KWF S+ S+ ++LA+ G + Sbjct: 96 SDVSLTETVATYQPEGASGFASKHGQIPLGPWSINGFKWFSSATDSEMTVLLARTAAGGL 155 Query: 254 GCFLVPRLLED-------GSP-------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 FL P D G P NG+ QRLKNK G +S T EL N G+++ Sbjct: 156 STFLAPMRKHDPEATTLTGEPKDDGRALNGVRIQRLKNKFGTQSLPTAELVLENMRGWMI 215 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPV 354 G + + L + SA+ +V G+ L A YA R V G L+D P+ Sbjct: 216 GQEGRGIHEISTILTLTRVHSAVAAVGGVGRGLGIARAYALVRDVGAGNRKRMRLVDSPL 275 Query: 355 MKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEA---------AYARIMAP 398 R +A I+ + ++F + +S D + EA R+M+ Sbjct: 276 HMRTLAKISAEYRRLMLVTFYTSYVLGVSEHSLDARPPPALEALTPQKKLVEPLLRVMSQ 335 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSILLGSGNAMVLD 453 + K + CK + ++ ME +GG GY+ EE+ +I+R YR++ I G+ + + D Sbjct: 336 LAKAYVCKHSVELLFSCMEALGGVGYLVNEEQEYLNISRIYRDACVLPIWEGTTDVLCTD 395 Query: 454 VLNLLE 459 ++ ++ Sbjct: 396 LIRAMK 401 >gi|83945393|ref|ZP_00957741.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851227|gb|EAP89084.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii HTCC2633] Length = 594 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 67/354 (18%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 KI S E+ T + LTE G+D+ A+ ++ + DG + +SG K +++ Sbjct: 151 KILSGEWSAT-------------MNLTEPGAGSDVGALRTKAEPNGDGSWAISGQKIYIT 197 Query: 237 SPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKIG 280 D ++LA+ +G G F+VP+ + D G+P N L L++K+G Sbjct: 198 WGEHDCAENIIHLVLARTPDGAAGTKGISLFIVPKFIPDADGNPGERNALQAIGLEHKMG 257 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335 + T +E+ G+LLGD + I ++SA ++V V +AE A Sbjct: 258 IHGSPTCTMEYDGAKGWLLGDEFKGMA-----AMFIMMNSARLNVGVQGVGIAERAYQQA 312 Query: 336 IHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAK 384 + YA+ R I +I P ++R +A + I A A+ + A D E Sbjct: 313 LAYAKDRKQGRAINMDDHGPHAIIHHPDVRRTLAVMKAKIEAGRAICYHAAVEADLGEHH 372 Query: 385 SRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 ++E A+++ +M PI K WC M V + ++ GG G+IEE A+H R++ Sbjct: 373 DDADEKAWSKRREDLMIPIAKAWCTDMGVDVASMGVQVHGGMGFIEETGAAQHLRDARIA 432 Query: 441 SILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLC 494 I G+ +D++ L +D G++ ++I +R +I C Sbjct: 433 PIYEGTNGIQAIDLVG-------------RKLARDAGTAVGELIEDVRQTIEDC 473 >gi|317122676|ref|YP_004102679.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter marianensis DSM 12885] gi|315592656|gb|ADU51952.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter marianensis DSM 12885] Length = 566 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 34/258 (13%) Query: 225 IYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKN 277 ++ L G K+F S + ++D ++ A+ EG + FLVPR+ G N +RLK+ Sbjct: 212 VWRLDGEKYFCSGAGLTDVAVVTARPEGAPAGPKGLALFLVPRMNRAGELN-YHVRRLKD 270 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K R+ + E++F + FL+G+ IY +++VS + ++A + Sbjct: 271 KSATRAVPSGEVDFRGSEAFLVGEAAQG----------IYYTLEVLTVSRLANAIA-GMG 319 Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSF----DE 382 AR+ H+ G LI+ P+++R + D+A+ IA L F A+ F DE Sbjct: 320 IARKAHLEVLERVRRRRSFGRALIEHPLIRRDLTDMAVRIAGGLVLGFHAADRFEKAWDE 379 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + YAR ++ + K A V AME GG G++EE ++AR +RE+ I Sbjct: 380 RPPYTARYHYARFLSHLAKNRTADHAAEVTRLAMELFGGLGFLEEYAVARWHREALITPI 439 Query: 443 LLGSGNAMVLDVLNLLEK 460 G N LD+L ++K Sbjct: 440 WEGPSNIQALDLLEAMDK 457 >gi|302414678|ref|XP_003005171.1| aidB [Verticillium albo-atrum VaMs.102] gi|261356240|gb|EEY18668.1| aidB [Verticillium albo-atrum VaMs.102] Length = 647 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 47/319 (14%) Query: 199 GLGLTEKRGGTDIAAITS---------------QGQKISD---GIYCLSGHKWFLSSPMS 240 G +TE+ GG+D+ + +GQ + G + + G KWF S+ S Sbjct: 205 GQWMTERSGGSDVRGTETIATRLTPTDLKGPGGRGQDVLGQPLGPWSIDGFKWFSSATDS 264 Query: 241 DAFIMLAQVEGRVGCFLVP--RLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 D ++LAQ + F VP R GS NG+ QRLKNK+G + T ELE G+ Sbjct: 265 DMTMLLAQTPKGLSAFCVPMRRKAGKGSELNGIRIQRLKNKMGTKGLPTAELELKGARGW 324 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 L+G+ + + + L + SVS LA Y + R V G L + Sbjct: 325 LVGEEGKGVKAISTVLNITRLYTGAGSVSYWARGLAVCRAYTKVRKVRGAYLYENLQHNH 384 Query: 358 AIADIALDIAAATALSF--------------RLANSFDEAKSRSEEAA--YARIMAPITK 401 +A + AATAL+F + N+ A ++E A R++ P+ K Sbjct: 385 WMAGETVKYQAATALTFFGVALLGCNEQGSSVMRNTPAAALIPNDETAKLLLRLLTPVIK 444 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEER------SIARHYRESPANSILLGSGNAMVLDVL 455 A A + MEC+GG GY E ++A+ +R+S +I G+ + M DV Sbjct: 445 AQTSVAAVAGLRANMECLGGVGYCENHEDGGILNLAKIFRDSVVQTIWEGTVSVMADDVG 504 Query: 456 NLLE----KGTNLFEQLFS 470 +L+ +G + E +F+ Sbjct: 505 RVLKDKRIQGGRIIEDVFA 523 >gi|154279652|ref|XP_001540639.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412582|gb|EDN07969.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 615 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 119/499 (23%), Positives = 202/499 (40%), Gaps = 93/499 (18%) Query: 28 PPLFIGMNAYSSDSLLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAY 87 PP ++ A+ + + L + PS + ++L VLS + A A N P L Sbjct: 18 PPQYVEDAAFRR-IISLYLPSPIPSSIDEDLSRFSRLVLSRSHMAYAADAEKNQPYLRPL 76 Query: 88 GPGG--ERWDKVEFHPAWHALLRRSIHDGL--------HCSIWDRSFEPVVRKQAHKIRA 137 G + D + W L R I +G+ S W+ Sbjct: 77 STFGTENKQDPLVTSEGWRKLQDRGIVEGMVGIAYANARGSPWNN--------------- 121 Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT--- 194 R Y +L HL + S AL+T P D A K+ R + N + + Sbjct: 122 -RAYQFIKL---HLWTSSA------ALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNR 171 Query: 195 ------SVAI--GLGLTEKRGGTDIAAITSQGQKISD----------------GIYCLSG 230 SVA G +TE++GG+D+ + +K+S G + L G Sbjct: 172 LISRNPSVAWTSGQWMTERKGGSDVRGTETVARKLSTEEQNASKGVDELGCPLGPWQLDG 231 Query: 231 HKWFLSSPMSDAFIMLAQV--EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGN 281 KWF S+ ++ IMLA+ +G++ F P R + G+ NG+ QRLKNK+G Sbjct: 232 FKWFSSATDANMTIMLARTGPDGQISAFYAPLRRRVVGGAEDETELNGVRIQRLKNKLGT 291 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 ++ T ELE G+L+G + + + + + +V G LA + YA+ Sbjct: 292 KALPTAELELKGMRGYLIGKEGDGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKV 351 Query: 342 RHVSGGILIDQP----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS---- 387 R G +L + P VM R + +A +A+ +S + +A S Sbjct: 352 RIAGGRLLTELPAHVRALAREHVMYRGLLHLAHFVASLLGISEGQDSRLTQATQASILPT 411 Query: 388 ---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPAN 440 + +A R++ P+ K + + ME +GG GY+E ++AR +R+ Sbjct: 412 NAEQSSALLRLLTPMGKAQTALRSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVL 471 Query: 441 SILLGSGNAMVLDVLNLLE 459 SI G+ + M D++ +++ Sbjct: 472 SIWEGTTDIMADDLVRVMK 490 >gi|302667173|ref|XP_003025177.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517] gi|291189267|gb|EFE44566.1| acyl-CoA dehydrogenase, putative [Trichophyton verrucosum HKI 0517] Length = 618 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 64/378 (16%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTN-----KAPMQKTS------VA 197 GHL + S A++T P + A K+ SR D N +A + TS Sbjct: 132 GHLWTASS------AMVTCPGSMTNGAAKLLSRHLDSENGRIFAEALKRLTSHDPAIAWT 185 Query: 198 IGLGLTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSD 241 G +TE+ GG+D+ + +K++ DG+ + L G KWF S+ ++ Sbjct: 186 SGQWMTERSGGSDVRGTETVARKLTPKEMEEDDGVDSVGMPLGPWRLDGFKWFSSATDAN 245 Query: 242 AFIMLAQV-EGRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN 293 IMLA+ E + F P R ++ P NG+ QRLKNK G ++ T ELE Sbjct: 246 MSIMLAKTGENSISAFYAPLRRQVKGKDPRESELNGVRIQRLKNKFGTKALPTAELEIKG 305 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G+L+G + + + + I SVS SLA Y++ R SG +L D P Sbjct: 306 MRGYLVGKEGQGVKEISTILNITRTGNCIASVSYWGRSLAICRAYSKVRVTSGRLLQDTP 365 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEA-----------------KSRSEEAAYARIM 396 R +A + AA+ L+F + + + + A R++ Sbjct: 366 SYVRTLARDHVKYAASMHLTFFVVALLGVSEGSSSSSCMASQTNILPRDNNHTLALLRLL 425 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL 452 P+ K A + +ME +GG GY+E +IAR +R++ SI G+ M Sbjct: 426 TPMAKARTALRAIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMAD 485 Query: 453 DVLNLLE--KGTNLFEQL 468 D++ +++ KG + + L Sbjct: 486 DLMRVVKGSKGPDCLDAL 503 >gi|55978299|ref|YP_145355.1| acyl-CoA dehydrogenase, short-chain specific ( AidB protein) [Thermus thermophilus HB8] gi|55773472|dbj|BAD71912.1| acyl-CoA dehydrogenase, short-chain specific (probable AidB protein) [Thermus thermophilus HB8] Length = 541 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 110/445 (24%), Positives = 185/445 (41%), Gaps = 46/445 (10%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGP 89 G N Y +D L L+ +F P +E ELL G Y+ + + P+L + Sbjct: 17 GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R D+V P +L+R P+VR + + L A Sbjct: 77 DGNRVDRVRLSPVQREVLKR--------------LRPIVRPPYEGGSWHHHFALGYLLAD 122 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206 + +T VA +HK Y P + ++ G +TE + Sbjct: 123 GGLYCILTITHQVAYP----IHK----------YAPGLASWKERVLYGEAFGATWMTEIQ 168 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVP 259 GG+D+ A + ++ + G K+F S + ++D ++ A+ EG + FL+P Sbjct: 169 GGSDLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLP 228 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 RL +G N +RLK K G R+ + E+E + +L+G + + L Sbjct: 229 RLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLA 287 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 +AI ++ +L E RRR G L D P+++ + D+++ A AL+ + Sbjct: 288 NAIAAMGIAAKALLETRQRVRRRQSFGRFLADHPLVRHDLLDLSVRQAGGLALALAAVEA 347 Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 FD E E AR ++ + K + + + AME GG G++EE ++AR +R Sbjct: 348 FDRAWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHR 407 Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460 ES I G N LD+L ++K Sbjct: 408 ESLITPIWEGPSNIQALDLLEAMQK 432 >gi|67541170|ref|XP_664359.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4] gi|40739383|gb|EAA58573.1| hypothetical protein AN6755.2 [Aspergillus nidulans FGSC A4] gi|259480348|tpe|CBF71395.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_5G09980) [Aspergillus nidulans FGSC A4] Length = 643 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 207/505 (40%), Gaps = 82/505 (16%) Query: 35 NAYSSDS----LLVALIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG 90 N +++D +L I + + L LG+ +S E + A N P + Y Sbjct: 23 NTFTTDPSLRRILEWYIPHHVDALSPHLTRLGDEAVSAKIHEWSADAERNLPYVKWYNVW 82 Query: 91 GERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 GER+ D++ W L +GL R + ++ + K R MAQ Sbjct: 83 GERYGVDRLVTSEGWKRLGAWGAENGLR-----RECDLLMADKYGKERR-----MAQYAV 132 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY--------DPTNKAPMQKTSVAI-- 198 ++ PS S A MT D A I S E P A + TS Sbjct: 133 NYMTGPSSGLTSCPASMT------DGAALILSNEIARRSLPQDHPFQVALRRLTSRGTDA 186 Query: 199 ---GLGLTEKRGGTDIAAI---------------TSQGQ-KISDGIYCLSGHKWFLSSPM 239 G +TE+ GG+D+ + GQ +I +G Y ++G K+F S+ Sbjct: 187 WTSGQWMTERAGGSDVQNTETWATYSPLPASELRNATGQPQIDEGEYLVNGFKFFSSATD 246 Query: 240 SDAFIMLAQV--EGRVGCFLVP--RLLEDGS------PNGLCYQRLKNKIGNRSNATVEL 289 ++ ++LA+ G++ FL P R + D NG+ RLKNK+G + T EL Sbjct: 247 ANIALLLAKTTPSGKLSVFLAPLRRTITDKDGKRHEVSNGVRIHRLKNKMGTKELPTAEL 306 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 E + L+GDL+ + + + + + S+ R +L+ A +A+ R G L Sbjct: 307 ELVDMRAHLVGDLDRGVQTIAPLLNITRAHTFLGSLGNWRRALSIAKAFAKTRTTVGEPL 366 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA-------------R 394 P+ R +A++ A L+F D E K+R + A R Sbjct: 367 WLIPMHLRLMAELEGRHRAGMELAFFTIAVMDLVENKTRDGQRELAHLPRAGAEANTVFR 426 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNA 449 + ++K KMA + E E +GG GY++E +++R R + NSI G+ N Sbjct: 427 TLTALSKAVISKMAVVGVQECQEAMGGVGYMDEPDEPEFNVSRILRNTFVNSIWEGTTNV 486 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQ 474 + + + L KG N F+ L +E+ Sbjct: 487 LASECVRFLLKGEN-FDVLAGWVER 510 >gi|1703067|sp|Q06319|ACDS_MEGEL RecName: Full=Acyl-CoA dehydrogenase, short-chain specific; AltName: Full=Butyryl-CoA dehydrogenase; Short=BCAD; AltName: Full=SCAD gi|1065243|pdb|1BUC|A Chain A, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase From Megasphaera Elsdenii gi|1065244|pdb|1BUC|B Chain B, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase From Megasphaera Elsdenii gi|149886|gb|AAA03594.1| acyl-CoA dehydrogenase [Megasphaera elsdenii] Length = 383 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 35/269 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF-L 257 GLTE GTD + + K DG Y L+G K F+++ +D +I+ A + G + Sbjct: 126 FGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 +LEDG+P G Y + ++K+G ++ T+EL F D+ V P E+M Sbjct: 186 TAFILEDGTP-GFTYGKKEDKMGIHTSQTMELVFQ--------DVKV---PAENMLGEEG 233 Query: 313 ---KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 KI ++ LD + V+ +LA+A+ Y+++R G L + +AD+ Sbjct: 234 KGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMK 293 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I AA L ++ A E K + +AA A+ +A +A V EA++ GG G Sbjct: 294 MQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVA-------SDVAMRVTTEAVQIFGGYG 346 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452 Y EE +ARH R++ I G+ ++ Sbjct: 347 YSEEYPVARHMRDAKITQIYEGTNEVQLM 375 >gi|45656282|ref|YP_000368.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599516|gb|AAS69005.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 565 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 43/328 (13%) Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 R A YL Q G + P + M+ AL T+ + K Y P Sbjct: 135 RYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEK----------YLPLVAGEG 184 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250 ++ G +TE+ GG++++A + +K +G + L+G KWF S+P D ++ A+VE Sbjct: 185 SQSHFMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFCSNP-GDLWVTTARVED 243 Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G FLVPR+ +DG+ NG R K+ IG+R TVE+ + LG P Sbjct: 244 TNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDGVEAEALGR------PA 297 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRAI 359 + LI ++ +S + VS+A EA YA+ R G +++ + + + Sbjct: 298 HGIANLI---KYVIGISRLHVSIAASGISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQL 354 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 +D L A FR ++ + K E ++AP+ KY C + + ++ + Sbjct: 355 SDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEITYNSILVL 408 Query: 420 GGSGYIEERS-IARHYRESPANSILLGS 446 GG+G + + S + R + +S N G+ Sbjct: 409 GGNGIVGDFSPLPRLHNDSIINETWEGT 436 >gi|85374006|ref|YP_458068.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis HTCC2594] gi|84787089|gb|ABC63271.1| putative acyl-CoA dehydrogenase protein [Erythrobacter litoralis HTCC2594] Length = 601 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/365 (24%), Positives = 159/365 (43%), Gaps = 55/365 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL+ +P + + PK+ S E+ T + LTE GT Sbjct: 126 MYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ I ++ + +DG Y ++G K F+S+ M+D I +LA+ G + F+V Sbjct: 173 DLGLIRTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + EDG+P NG+ +++K+G NAT + + + G+++G+ N + M Sbjct: 233 PKFIVDEDGNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD----------IA 363 L I + V+ A+ YA R G + P A AD + Sbjct: 293 NAARLGVGIQGLGQAEVAYQNAVAYALDRRQ--GRALTGPAEPEAKADPIFVHPDVRRML 350 Query: 364 LDIAAAT----------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 +D A T AL L + + R+E A +M P+ K + A+ Sbjct: 351 MDGKAFTEGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYGTDKGYAIAT 410 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471 + + GG GYIEE ++++ R++ I G+ +D+ L + G + F Sbjct: 411 DMQQVFGGHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRM 470 Query: 472 LEQDL 476 + +++ Sbjct: 471 IGEEI 475 >gi|24213138|ref|NP_710619.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|24193845|gb|AAN47637.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 565 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 43/328 (13%) Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 R A YL Q G + P + M+ AL T+ + K Y P Sbjct: 135 RYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTSEQKEK----------YLPLVAGEG 184 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE- 250 ++ G +TE+ GG++++A + +K +G + L+G KWF S+P D ++ A+VE Sbjct: 185 SQSHFMAGQYVTERVGGSNVSANRTIARKQDNGKWILTGEKWFCSNP-GDLWVTTARVED 243 Query: 251 -GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G FLVPR+ +DG+ NG R K+ IG+R TVE+ + LG P Sbjct: 244 TNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIVYDGVEAEALGR------PA 297 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRAI 359 + LI ++ +S + VS+A EA YA+ R G +++ + + + Sbjct: 298 HGIANLI---KYVIGISRLHVSIAASGISRRAWTEAYEYAKFRTAYGSKILEFSSLLKQL 354 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 +D L A FR ++ + K E ++AP+ KY C + + ++ + Sbjct: 355 SDQRLKHTAMLTSIFRHFHTPETLKLAGE------VLAPLLKYKCSATSTEITYNSILVL 408 Query: 420 GGSGYIEERS-IARHYRESPANSILLGS 446 GG+G + + S + R + +S N G+ Sbjct: 409 GGNGIVGDFSPLPRLHNDSIINETWEGT 436 >gi|46255145|ref|YP_006057.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27] gi|46197994|gb|AAS82404.1| acyl-CoA dehydrogenase aidB [Thermus thermophilus HB27] Length = 541 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 110/445 (24%), Positives = 185/445 (41%), Gaps = 46/445 (10%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELL--GEYVLSCTAQELARMANYNTPQLHAYGP 89 G N Y +D L L+ +F P +E ELL G Y+ + + P+L + Sbjct: 17 GKNHYEADPELRDLLRHFWPGAGDREAELLAWGAYMGREVYEAAYHIDQDAGPELVMHDL 76 Query: 90 GGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 G R D+V P +L+R P+VR + + L A Sbjct: 77 DGNRVDRVRLSPVQREVLKR--------------LRPIVRPPYEGGSWHHHFALGYLLAD 122 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206 + +T VA +HK Y P + ++ G +TE + Sbjct: 123 GGLYCILTITHQVAYP----IHK----------YAPGLASWKERVLYGEAFGATWMTEIQ 168 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVP 259 GG+D+ A + ++ + G K+F S + ++D ++ A+ EG + FL+P Sbjct: 169 GGSDLGANRTVARREGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLALFLLP 228 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 RL +G N +RLK K G R+ + E+E + +L+G + + L Sbjct: 229 RLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLTVSRLA 287 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 +AI ++ +L E RRR G L D P+++ + D+++ A AL+ + Sbjct: 288 NAIAAMGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALALAAVEA 347 Query: 380 FD----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 FD E E AR ++ + K + + + AME GG G++EE ++AR +R Sbjct: 348 FDRAWHERPPYGEAYHLARFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAVARWHR 407 Query: 436 ESPANSILLGSGNAMVLDVLNLLEK 460 ES I G N LD+L ++K Sbjct: 408 ESLITPIWEGPSNIQALDLLEAMQK 432 >gi|315051740|ref|XP_003175244.1| aidB protein [Arthroderma gypseum CBS 118893] gi|311340559|gb|EFQ99761.1| aidB protein [Arthroderma gypseum CBS 118893] Length = 618 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 192/476 (40%), Gaps = 80/476 (16%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + PS + ++ V+S + A A N P L G + D + W Sbjct: 35 LPSPLPSSLEEDFTRFSRLVISKPVLDYAAEAERNQPYLKPLSTFGIENKQDSLVTSEGW 94 Query: 104 HALLRRSIHDGLHCSIWDRSFEP--VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM 161 AL +I +GL + EP V R ++ HL +PS Sbjct: 95 RALQDINIREGLV----GLAPEPGWAVNDTKWNTRVSKGI------KSHLWTPSS----- 139 Query: 162 VALMTTPRVHKDWAPKIFSREYDPTN---------KAPMQKTSVAI--GLGLTEKRGGTD 210 A++T P D A ++ SR D N + + ++A G +TE++GG+D Sbjct: 140 -AMVTCPGSMTDGAARLLSRHLDGENGQIFAEALKRLTSRDPTIAWTSGQWMTERKGGSD 198 Query: 211 IAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253 + + +K++ G + L G KWF S+ ++ IMLA+ E + Sbjct: 199 VRGTETVARKLTPQEMEEDAGVDSVGMPLGPWRLDGFKWFSSATDANMSIMLAKTGENSI 258 Query: 254 GCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 F P R ++ P NG+ QRLK K G ++ T ELE G+L+G Sbjct: 259 SAFYAPLRRQVQGKDPKASELNGVRIQRLKKKFGTKALPTAELEIKGMRGYLVGKEGQGV 318 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + + + I SV SLA Y++ R SG +L D P R +A + Sbjct: 319 KEISTILNITRAGNCIASVGYWGRSLAICRAYSKVRVTSGRLLQDTPSYIRTLARDHVKY 378 Query: 367 AAATALSFRL-------------------ANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 AA+ L+F + N + K+ + + R++ P+ K Sbjct: 379 AASMHLTFFILALLGISEGGTISSCMAAQVNIIPQDKNHTLQ--LIRLLTPMAKARTALR 436 Query: 408 APAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 A + +ME +GG GY+E +IAR +R++ SI G+ M D++ +++ Sbjct: 437 AIKGVRASMENLGGIGYLENEDPILNIARIFRDTCVLSIWEGTTEVMADDLMRVVK 492 >gi|115399798|ref|XP_001215488.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191154|gb|EAU32854.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 634 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 120/481 (24%), Positives = 198/481 (41%), Gaps = 76/481 (15%) Query: 35 NAYSSD-SLLVALIANFP----SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y+SD SL L P + + L LG +S +E + A P + +Y Sbjct: 24 NTYTSDASLQRQLSWYIPHDTLTHIQSHLTQLGAEAISDQIREWSANAERQQPYVKSYNV 83 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 GER+D K+ W L R + G+ +D++ P R + Q Sbjct: 84 WGERYDYDKLVTSEGWKQLGRWGVRHGVVSLGYDQTLGPERR-------------LIQYA 130 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY-----DPTNKAPMQK------TSV 196 +L +PS L + P D A ++ + D A QK S Sbjct: 131 VNYLYAPSS------GLYSCPISMTDGAARVLTNHLSALPADHPFHAVFQKLTSRGEDSW 184 Query: 197 AIGLGLTEKRGGTDI-----------AAITSQGQK-ISDGIYCLSGHKWFLSSPMSDAFI 244 G +TE+ GG+D+ A TSQ + +G Y ++G K+F S+ ++ + Sbjct: 185 TSGQWMTERTGGSDVQETETWATYSPATHTSQASNGLDEGDYLINGFKFFSSATDANIAL 244 Query: 245 MLAQV-EGRVGCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTF 295 +LA+ G++ FL P + DG+P NG+ RLKNK+G + T ELE + Sbjct: 245 LLAKTASGKLSLFLAPLRKTVVGSDGTPREVTNGVRIHRLKNKLGTKELPTAELELRDMR 304 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 L+G L+ + + + + I S++G R +++ A +A+ R G L P+ Sbjct: 305 AHLVGALDAGIPTIAPLLNITRAHTFIGSLAGWRRAISIAKAFAKARTTVGEPLWLIPMH 364 Query: 356 KRAIADIALDIAAATALSF----RLANSFDEA---------KSRSEEAAYARIMAPITKY 402 +AD+ + A L F +A + + ++ E A R + I K Sbjct: 365 LNLLADMEIRHRGAMNLGFFAIAVMAMTENPGAAPVAPHLPRAGDEAAVVLRALTAIGKA 424 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNL 457 K A A I E E +GG GY++E +IAR R + N+ G + +++ Sbjct: 425 VVSKSAIAGIQECQEAMGGVGYMDEADEPEFNIARIMRNTIVNATWEGPTGVLASELIRF 484 Query: 458 L 458 L Sbjct: 485 L 485 >gi|313679494|ref|YP_004057233.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] gi|313152209|gb|ADR36060.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] Length = 535 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 13/286 (4%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 +TE +GG+D+ A + ++ +G K+F S + ++D + A+ EG + Sbjct: 156 MTEIQGGSDLGANRTVARREGGVWRLFAGDKYFASGAGLADVAVATARPEGAPAGPKGLA 215 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVPRL DG+ N +RLK K G R+ + E+E + +L+G + Sbjct: 216 LFLVPRLRADGTLN-FTVRRLKVKSGTRAVPSGEVELEGSEAYLIGRAEEGIYYTLETLT 274 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L +A+ ++ ++ E +RR G L P+++ + ++A+ A AL+F Sbjct: 275 VSRLANAVAAMGIAGKAILEVRERVQRREAFGRPLAAWPLVRHDLLELAVRQAGGLALAF 334 Query: 375 RLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++FD A + +E +AR ++ + K A A+ AME GG G++EE ++ Sbjct: 335 AAVDAFDRAWADRPPYTERYHFARFLSHLAKNRTADHAAAITRLAMELFGGLGFLEEYAV 394 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 AR +RE+ I G N LD+L ++K E + LE+ L Sbjct: 395 ARWHREALITPIWEGPSNVQALDLLEAMQK-KRAHEPFLAWLEERL 439 >gi|218782675|ref|YP_002433993.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764059|gb|ACL06525.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 615 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 68/364 (18%) Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 I A A AGH + M+ + T + + + K++S E+ T Sbjct: 117 IIGANFAFAAYGYAGH------GTGKMIEIFGTDKQKELYLKKLYSAEWGGT-------- 162 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249 + LTE G+D+ +++ DG Y +SG+K F++ D +LA++ Sbjct: 163 -----MVLTEPEAGSDVGNLSTTATPNDDGTYNISGNKIFITGAEQDLTPNVIHPVLARI 217 Query: 250 EGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF--- 295 EG + F+VP++ +DGS PN + +++K+G + ++T L F Sbjct: 218 EGAPKGTKGISLFIVPKIWVNDDGSLGEPNDVVCTGIEHKMGLKGSSTCSLTFGGQGKCK 277 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSA----IMSVSGMRVSLAE--AIHYARRR------- 342 G LLG++N + M+++ ++ + + ++ S A A++YA+ R Sbjct: 278 GVLLGEVN------KGMQVMFHMMNEARLLVGTIGACNASAAYLYAVNYAKERVQGRDLD 331 Query: 343 -----HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------A 391 + +I P ++R + + + +L + AN FD+ + ++EA Sbjct: 332 DMFNHDATPVTIIKHPDVRRMLLWMKAHVDGMRSLCYYGANLFDKIELETDEAKKDYMQG 391 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I+ PI K +C V EA++C GG GY +E + + R+S NSI G+ Sbjct: 392 VIEILTPIIKSYCTDRGFQVCGEAIQCYGGYGYTQEFPVEQIMRDSKINSIYEGTNGIQA 451 Query: 452 LDVL 455 +D+L Sbjct: 452 MDLL 455 >gi|163738877|ref|ZP_02146290.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] gi|161387682|gb|EDQ12038.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] Length = 568 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 45/326 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y +SG K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKADPLDDGTYAISGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA++ + FLVP+ L D G N L L++K+ Sbjct: 197 SWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLPDADGNPGKANDLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----E 334 G + T +++ G+++G + +++A + V G V +A + Sbjct: 257 GLHGSPTCVMQYDGAIGWMIGQPGGGLA-----AMFTMMNNARLGVGGQGVGIAGAAYQK 311 Query: 335 AIHYARRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389 A+ YA R + G ++D ++R + ++ D+ AA A+ + + D A + E Sbjct: 312 ALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATATQEW 371 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A + PI K + + V ++ GG G+IEE A+ YR+ +I G+ Sbjct: 372 AARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGI 431 Query: 450 MVLDVLNL-LEKGTNLFEQLFSTLEQ 474 +D++ + G ++ +L +E+ Sbjct: 432 QAMDLVGRKMMDGGDMAHRLIDEIEE 457 >gi|163741877|ref|ZP_02149267.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] gi|161385050|gb|EDQ09429.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] Length = 568 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 45/326 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y +SG K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKADPLDDGTYAISGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA++ + FLVP+ L D G N L L++K+ Sbjct: 197 SWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLPDADGNPGKANDLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----E 334 G + T +++ G+++G + +++A + V G V +A + Sbjct: 257 GLHGSPTCVMQYDGAIGWMIGQPGGGLA-----AMFTMMNNARLGVGGQGVGIAGAAYQK 311 Query: 335 AIHYARRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEE 389 A+ YA R + G ++D ++R + ++ D+ AA A+ + + D A + E Sbjct: 312 ALAYALERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATATQEW 371 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A + PI K + + V ++ GG G+IEE A+ YR+ +I G+ Sbjct: 372 AARAAFLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGI 431 Query: 450 MVLDVLN-LLEKGTNLFEQLFSTLEQ 474 +D++ + G ++ +L +E+ Sbjct: 432 QAMDLVGRKMMDGGDMAHRLIDEIEE 457 >gi|70607507|ref|YP_256377.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639] gi|68568155|gb|AAY81084.1| acyl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639] Length = 557 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 22/293 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLS-SPMSDAFIMLAQVEGR------ 252 TE +GG+D+ A + K DG + L+G K+F S + ++ ++ A+ +G Sbjct: 168 FTEVQGGSDLGANLVEAYK--DGNTWKLNGITKYFASDAGLAHYALVTARPKGAPSGAKG 225 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 +G FL P+L G N L +RLK K S T E+EF + +G+LN + Sbjct: 226 LGLFLAPKLDSSGRRNFLI-RRLKEKSATISVPTGEVEFHGSEAQPIGELNQGIYYTVET 284 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +A ++ R + EA +YA++R G LI+ P+++R + D+ + I AL Sbjct: 285 LTVSRIANAFGALGLARKAYLEAYYYAQKRKAFGKPLIEHPLVRRDLLDMEVYIEGTMAL 344 Query: 373 SFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + + F ++ +E YAR++ I K M+ V AME GG G++ E Sbjct: 345 ALKSVSEFQKSWMSTPPYNENYNYARLLTHIAKNMTADMSAYVTKMAMELHGGIGFLREF 404 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-LLEKGTNL-----FEQLFSTLEQD 475 I R +RE+ I G N LD+L L++K +L E L + L++D Sbjct: 405 PIERLHREALITPIWEGPSNIQALDMLEALVKKKAHLTLIKDMENLVNQLKED 457 >gi|260431589|ref|ZP_05785560.1| acyl-CoA dehydrogenase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415417|gb|EEX08676.1| acyl-CoA dehydrogenase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 584 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 34/302 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+TS+ + DG Y ++G K ++ Sbjct: 167 PKLMSGEWSGT-------------MNLTEPQAGSDVGALTSKAEPNGDGTYSVTGQKIYI 213 Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLL--EDGSP---NGLCYQRLKNKI 279 S +D ++LA++ +G G FLVP+ + E+G+P N L L++K+ Sbjct: 214 SWGDNDFCENVCHLVLARLPDGAPGTKGISLFLVPKFIPDENGNPGVANDLKVVSLEHKM 273 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+L+G + + M L V + A+ YA Sbjct: 274 GLHGSPTCVMQYDGAKGWLVGQEHKGMAAMFTMMNNARLGVGGQGVGAAEGAYQHALAYA 333 Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAYAR 394 R G +ID ++R + D+ D+ AA A+ A + D AK+ ++ AA A Sbjct: 334 LERKQGKTPSGTIIDHADVRRMLMDMRADLFAARAIMLANAAATDMAKATGNADWAARAA 393 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ PI K + + V ++ GG GYIEE A++YR+ +I G+ +D+ Sbjct: 394 LLTPICKAFGTQTGMRVAETGLQVHGGMGYIEETGAAQYYRDVRVTAIYEGTNGIQAMDL 453 Query: 455 LN 456 + Sbjct: 454 VG 455 >gi|254455519|ref|ZP_05068948.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] gi|207082521|gb|EDZ59947.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] Length = 587 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 40/319 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + SDG Y +SG K F++S D +++A+ Sbjct: 164 LTEPVCGTDLGMLKTKAVEQSDGTYKISGQKIFITSGDQDLTENIIHLVIARASDSPPGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + EDG+ NG+ +++K+G + +AT L F G+++G N Sbjct: 224 KGISLFLVPKFIVNEDGTIGPRNGVSTGSVEHKMGIKGSATCVLNFDEAVGYMIGPKNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILIDQ 352 + M ++ L+ I+ V G+ +S ++ YA+ R +I+ Sbjct: 284 ---LSQMFTMMNLERIIVGVQGLGISEIAYQNSLSYAKERKQGKTNNSKSTNGADFIIEH 340 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 ++R++ ++ I AL F L+ + + K + E + Y +M P+ K Sbjct: 341 ADIRRSLLNMKSIIEGERALCFWLSQQTEVSLNHPDEKIKQEASDYVSLMTPVVKSLFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464 +A + ++AM+ GG G+ +++ I + YR++ I G+ + D++ L K N+ Sbjct: 401 LATEITSDAMQIHGGYGFTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLSNKNGNI 460 Query: 465 FEQLFSTLEQDLGSSGKKV 483 + ++ + S +KV Sbjct: 461 IGNFLNMIKMECESKNEKV 479 >gi|304321110|ref|YP_003854753.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] gi|303300012|gb|ADM09611.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] Length = 594 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 36/311 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE + GTD+ I ++ + DG Y +SG K ++S+ MSD I +LA++ G Sbjct: 163 MNLTEPQCGTDLGLIRTKAEPQDDGTYKISGQKIWISAGEHDMSDNIIHLVLAKIPGGPD 222 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ + EDGS N + L+ K+G NAT + + G+L+G+ + Sbjct: 223 GVKGISLFIVPKFMVNEDGSLGERNNVVCGGLEEKMGIHGNATCVMNYDEATGYLVGEEH 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354 + M L + +S V+ A +A+ R +SG DQP Sbjct: 283 KGLRAMFIMMNEARLGVGLQGLSAAEVAYQNAAAFAKDRLQMRSISGTKAPDQPADPIIV 342 Query: 355 ---MKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 ++R + D + A L++ LA+ ++ +R + Y ++ PI K + Sbjct: 343 HPDVRRMLLDTRVFTEGARMLTYWAALHEDLAHKSEDEATRQKAKDYMGLLTPIIKAFNT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 ++M+ GGSGY+EE +++ R++ I G+ LD++ L+ +G Sbjct: 403 HKGFEGTCDSMQVFGGSGYVEEWGMSQFLRDTKIAMIYEGTNGIQALDLVGRKLMAEGGR 462 Query: 464 LFEQLFSTLEQ 474 L++ F +++ Sbjct: 463 LWQTFFKEVDE 473 >gi|134093872|ref|YP_001098947.1| putative acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans] gi|133737775|emb|CAL60820.1| Acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans] Length = 596 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 163/345 (47%), Gaps = 57/345 (16%) Query: 143 MAQLEAGHL---MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 M L A +L + P +T ++ ALMT + + + P + ++ T Sbjct: 112 MEMLNAANLSFALCPLLTDGAIEALMTAGSEAQKETFLPNFIAGKWTGT----------- 160 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249 + LTE + G+D+A + S+ DG Y +SG K F++ D ++LA+ Sbjct: 161 --MNLTEPQAGSDLAMVRSRAVPQGDGTYKISGTKIFITYGEHDMAENIVHLVLARTPDA 218 Query: 250 -EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298 EG G F+VP+ L + G+ N +++K+G R++ T L+F + G L Sbjct: 219 PEGVKGISLFVVPKFLVNADGSLGARNDAYCVSIEHKLGIRASPTAVLQFGDHGGAIGTL 278 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI------- 348 +G+ N +E M I++ + + G+ V+ +A+ YA+ R S + Sbjct: 279 VGEENRG---LETMFIMMNAARFAVGIQGIAVAERAYQKAVSYAKDRVQSKDLEGSATAV 335 Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401 +I QP ++R + + I AA AL++ A +FD +A+ RS A+ + P+ K Sbjct: 336 SIIHQPDVRRMLMSMRAQIEAARALAYVGAAAFDIAHHHADAEVRSSHQAFYEFLVPVIK 395 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 396 GWATEMSIDVASTGLQIHGGMGFIEETGAAQYYRDARILTIYEGT 440 >gi|327277826|ref|XP_003223664.1| PREDICTED: putative acyl-CoA dehydrogenase AidB-like [Anolis carolinensis] Length = 534 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 106/450 (23%), Positives = 173/450 (38%), Gaps = 119/450 (26%) Query: 24 ALNQPPLFIGMNAYSSDSLLVALI-ANFPSVVHKELELLGEYVLSCTAQE---LARMANY 79 A+ QP IG N + D LL + + ++ P+ + +E+ L + + +E L R Sbjct: 49 AMEQP--HIG-NPFQEDPLLKSYLGSHLPAQIFREVSLDLDRFGARVTKEIDFLGRECEL 105 Query: 80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAAR 139 + P+L + P G+R D++ L C+ W KQ K+ A Sbjct: 106 HPPRLLTFDPWGQRKDQL-----------------LTCAAW---------KQMKKVAA-- 137 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 E G +VA+ + R+Y G Sbjct: 138 -------EEG-----------LVAM-------------AYERKYAQWXXXXXXXXXWTSG 166 Query: 200 LGLTEKRGGTDIAAITSQ-GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--------E 250 +TE++GG+D+ T ++ SDG Y L G KWF S+P SD + LA++ E Sbjct: 167 QWMTERKGGSDVVGSTETIAREQSDGTYSLHGFKWFTSAPDSDVALALARIMTPHGATKE 226 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + F + L +G NG+ +RLK+K+G R T E+ + + Sbjct: 227 G-LSLFYLQLLDGEGKRNGMEIRRLKDKLGTRQLPTAEILLDGAKALRISPEGRGVPSIA 285 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M + + +AI + + MR A YA +R G L D P+ + +A + Sbjct: 286 AMLTITRIYNAISAAAAMRRVTHLARDYATKRKAFGKTLNDHPLHVQTLARM-------- 337 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 K A AV +E +EC GG G++E+ + Sbjct: 338 -----------------------------------KSAVAVASEGLECFGGQGFMEDTGL 362 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A R++ I G+ N + LDVL + K Sbjct: 363 AAILRDAQVLPIWEGTTNILSLDVLRSIHK 392 >gi|311105565|ref|YP_003978418.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310760254|gb|ADP15703.1| acyl-CoA dehydrogenase, middle domain protein 6 [Achromobacter xylosoxidans A8] Length = 589 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 51/332 (15%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + P +T+ ++ AL+T +P++ R +P T + LTE + G+D+ Sbjct: 124 LCPLLTNGAIEALLTA------GSPELKQRFIEPMISGRWTGT-----MNLTEPQAGSDL 172 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLVPR 260 A + S+ Q + DG Y +SG K F++ D ++LA++ EG G FLVP+ Sbjct: 173 AMVRSRAQPVGDGTYRISGTKIFITYGEHDLAENILHLVLARLPDAPEGVKGISLFLVPK 232 Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L EDG+ N + +++K+G +++ T L+F + G+L+G N ++ M Sbjct: 233 FLVNEDGTLGARNDVHCVSIEHKLGIKASPTCTLQFGDAGGALGYLVGQENRG---LDAM 289 Query: 313 KILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKRAIA 360 I++ + V G+ V+ LA A + R V G +I P ++R + Sbjct: 290 FIMMNAARYAVGVQGVAVADRAHQHALAYAAERVQSRPVDGSSKDAVPIIQHPDVRRMLG 349 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAE 414 + A AL++ A D+A + + A R +A PI K WC +M+ V + Sbjct: 350 TMRALTEAGRALAYYTAGHADQAHANPDAEARKRHLAVQEYLVPIVKGWCTEMSIDVASL 409 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG G+IEE A++YR++ +I G+ Sbjct: 410 GVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441 >gi|316932355|ref|YP_004107337.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600069|gb|ADU42604.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 596 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + AL +P + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ K +DG Y ++G K F+S+ M+D I +LA++EG + F+V Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ NG+ +++K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFLVNPDGTVGTRNGVICGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355 L A+ ++ V+ A+ YAR R +SG D+P + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A + TAL +A+ +AK R + +M P+ K A A Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQSADDHLGLMTPVLKGVLTDGGFANAVAA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI + + R++ I G+ LD++ Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|218295425|ref|ZP_03496238.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218244057|gb|EED10583.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 514 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 112/448 (25%), Positives = 195/448 (43%), Gaps = 55/448 (12%) Query: 33 GMNAYSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANY----NTPQLHAY 87 G N Y+ D L A++ F P + +EL G V +E+ +A++ + P+L + Sbjct: 9 GENHYNLDPDLKAVLDAFAPGLPQEELSAFGRLV----GEEVLEVAHHVDALSPPRLLMH 64 Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARL-YLMAQL 146 G R D+ PA ALL + P+VR A++ R L Y + L Sbjct: 65 DLDGNRIDRALLSPAERALLEK--------------LRPMVRP-AYEGRGWPLHYALGYL 109 Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LT 203 A + +T VA +HK Y P A ++ G +T Sbjct: 110 LADGGLYCILTITHQVAYA----LHK----------YAPEWSAVKRELLYGKAYGATWMT 155 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCF 256 E +GG+D+ A + ++ + G K+F S + ++D ++ A+ EG + F Sbjct: 156 EVQGGSDLGANRTLARREGEAYRLYHGDKYFASGAGLADYALVTARPEGAPEGPKGLALF 215 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+PR +E G N +R K K+ R+ + E+E + +LLG + + Sbjct: 216 LLPREVE-GRLN-FRVRRFKEKLATRAVPSGEVELEGSLAYLLGRPEEGIYYTLETLTVA 273 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF-- 374 L +A+ ++ + + E + RRR G L+D +++ + ++ L A TAL+F Sbjct: 274 RLANAVAAMGLAKKAHLEVLFRVRRRTAFGRRLLDHDLVQHDLLEMRLRQVAGTALAFLA 333 Query: 375 --RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R ++E S+ AR+++ + K + A + AME GG G++E+ +AR Sbjct: 334 VARFDQVWEERPPYSQAYHLARLLSHLAKGRTAEHAAQITGLAMELFGGLGFLEDYGVAR 393 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 +RE+ I G N LD+L + K Sbjct: 394 FHREALITPIWEGPANIQALDMLEAVAK 421 >gi|255937167|ref|XP_002559610.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584230|emb|CAP92262.1| Pc13g11930 [Penicillium chrysogenum Wisconsin 54-1255] Length = 605 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 195/476 (40%), Gaps = 84/476 (17%) Query: 35 NAYSSDSLLVALIANF-PS----VVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y+SD L ++ + P+ ++ L LGE +S A N P + Y Sbjct: 24 NTYTSDISLQRMLGWYLPAQTLKLIEPHLAQLGEEAVSPQVFAWNADAETNLPYVKKYNV 83 Query: 90 GGERW--DKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+ D++ W L + G+ +D ++ V R+ AQ Sbjct: 84 WGQRYAYDRLVTTDGWKQLGKWGAKHGVVSLGYDHTYG-VYRR------------TAQYA 130 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 A +L +PS A+ P D A ++ G +TE+ G Sbjct: 131 AVYLYAPSS------AMYRCPMSMSDGA-------------------ALTSGQWMTERAG 165 Query: 208 GTDIA--------AITSQGQKISD----GIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254 G+D+ A Q K SD G Y +SG K+F S+ ++ +LA+ + G++ Sbjct: 166 GSDVQNTETWATYAPLPQESKTSDVLAEGDYLISGFKFFSSATDANVAFLLAKTDSGKLS 225 Query: 255 CFLVP----RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 F+ P + DG P NG+ R KNK+G + T ELE L+G+L+ Sbjct: 226 TFIAPLRKTSIGADGKPEETSNGVRIHRFKNKLGTKELPTAELELKGMRAHLVGELDQGI 285 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + + + + ++S R +++ ++A+ R G L P+ R +AD+ + Sbjct: 286 VTIAPLLNTTRIQTLLGTLSTWRRAISITKNFAKSRTTVGEPLWLIPMHLRLLADVEVKH 345 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYA-------------RIMAPITKYWCCKMAPAVIA 413 A L+F ++ S A +A R++ +K KM+ + Sbjct: 346 RGAINLAFFTIAVMGLIENPSSPARHAHMPRDPTEAKVVFRVLTATSKGVVSKMSMVGVQ 405 Query: 414 EAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E E IGG GYI+E +I+R R + I G+ N + +++ L KG NL Sbjct: 406 ECQEAIGGVGYIDEPDEPEFNISRLLRSAAVYPIWEGTTNVLASELVRFLMKGDNL 461 >gi|119385593|ref|YP_916648.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119376188|gb|ABL70952.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 592 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE GTD+ + ++ + DG Y ++G K F+S+ D ++LA+ G Sbjct: 161 MNLTEPHAGTDLGLLRTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGE 220 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ L EDGSP N L L+ K+G NAT + + G+LLG+L+ Sbjct: 221 GTRGISLFIVPKFLVNEDGSPGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351 + M + + S + A+ YAR R V+G LI Sbjct: 281 KGMRAMFTMMNEARIGVGLQGYSVAEAAYQNAVAYARDRLQGRAVTGDANPSGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY--ARIMAPITKYWCCKMAP 409 P ++R + D + A AL+F A+ D A ++ A+ ++ P+ K + Sbjct: 341 HPDIRRNLMDQKSFLEGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYIEE+ +++ R++ I G+ LD++ Sbjct: 401 ETAVQAQQVFGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLVG 447 >gi|238482813|ref|XP_002372645.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220700695|gb|EED57033.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 637 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 122/477 (25%), Positives = 204/477 (42%), Gaps = 56/477 (11%) Query: 35 NAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y+SD SL AL P+ +L LGE +S +E + A + P + + Sbjct: 23 NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+D ++ W L + G+ S+ +EP + ++ A YL + Sbjct: 83 WGQRYDYDRLITSEGWKQLGKWGARHGV-VSL---GYEPTYGAERRLVQYAVNYLYS--P 136 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKR 206 + L S V+ + AL+ A F Y +K TS G +TE+ Sbjct: 137 SSGLYSCPVSMSDGAALVLNQERKNVAADHPFQTAYQKLISKKEDYWTS---GQWMTERA 193 Query: 207 GGTDIAAIT--------SQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253 GG+D+ S K S+G+ Y ++G K+F S+ ++ +MLA+ G++ Sbjct: 194 GGSDVQNTETWATYSPLSHRSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKL 253 Query: 254 GCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 FL P + EDG P NG+ RLKNK+G + T ELE + L+G ++ Sbjct: 254 STFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHG 313 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + + + I S++ R +++ +A+ R G L P+ +AD+ + Sbjct: 314 VMAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKVRTTVGEPLWLIPMHLSLLADLEVK 373 Query: 366 IAAATALSF------------RLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVI 412 A L+F ++ ++ +EA R + I K K A A I Sbjct: 374 HRGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGKEAQVVFRALTAIAKAVISKNAIAGI 433 Query: 413 AEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E E +GG GY++E +IAR R + NSI G+ N + +++ L K NL Sbjct: 434 QECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNL 490 >gi|317407384|gb|EFV87348.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter xylosoxidans C54] Length = 589 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T+ ++ AL+T +P + + + + S ++ T + LTE + G+ Sbjct: 124 LCPLLTNGAVEALLTAGSPELRERFIGPMLSGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ Q + DG Y +SG K F++ D ++LA++ EG G FLV Sbjct: 171 DLALLRSRAQPVGDGTYRISGTKIFITYGEHDLAENIIHLVLARLPDAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G+L+G N ++ Sbjct: 231 PKFLVNDDGSLGARNDVTCVSIEHKLGIKASPTATLQFGDAGGAIGYLVGQENRG---LD 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGG-----ILIDQPVMKRA 358 M I++ + V G+ V+ LA A + R V G +I P ++R Sbjct: 288 AMFIMMNAARFAVGVQGIAVADRAYQHALAYAAERVQSRPVDGSSRDAVPIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVI 412 + + A AL++ A D A + ++ AA AR +A PI K WC + + V Sbjct: 348 LGTMRALTEAGRALAYYTAGHADLAHASADPAARARHLAVQEFLVPIVKGWCTEASIDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441 >gi|134101222|ref|YP_001106883.1| hypothetical protein SACE_4690 [Saccharopolyspora erythraea NRRL 2338] gi|291007789|ref|ZP_06565762.1| hypothetical protein SeryN2_24959 [Saccharopolyspora erythraea NRRL 2338] gi|133913845|emb|CAM03958.1| hypothetical protein SACE_4690 [Saccharopolyspora erythraea NRRL 2338] Length = 466 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 1/177 (0%) Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 A+ E+ + F +G+L + +M + L +A+ + + MR ++ E++ + RRR Sbjct: 2 ASGEVTLDDAFAVPVGELTNGFRQMAEMLNVSRLSNAMRAAALMRRAVLESVEHTRRRPA 61 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITKYW 403 G L DQP+M+ + + D AA L A D++ + + A + R++ P+ KY Sbjct: 62 FGKALFDQPLMRATLLPMITDAEAALGLVLESAARLDDSDAGDQAARSLIRVLTPLAKYK 121 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 CK A + EAME GG+GYIE+ R R++ SI GS N + LDVL + + Sbjct: 122 VCKQARGITGEAMEIRGGNGYIEDWVNPRLLRDAHLGSIWEGSSNVIALDVLRCMRR 178 >gi|39933893|ref|NP_946169.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39647740|emb|CAE26260.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 596 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + AL +P + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ K +DG Y ++G K F+S+ M+D I +LA++EG + F+V Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ NG+ +++K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFLVNPDGTVGARNGVMCGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355 L A+ ++ V+ A+ YAR R +SG D+P + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A + TAL +A+ +AK R + +M P+ K A A Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQTADDHLGLMTPVLKGVLTDGGFANAVAA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI + + R++ I G+ LD++ Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|192289313|ref|YP_001989918.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283062|gb|ACE99442.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 596 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + AL +P + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTMGAAAALTVHGSPEQKQTYLPKMVSGEWTGT-------------MNLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ K +DG Y ++G K F+S+ M+D I +LA++EG + F+V Sbjct: 173 DLGLLRTKAVKQADGSYKITGTKIFISAGEHDMADNIIHLVLARIEGAPAGIKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ NG+ +++K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFLVNPDGTVGARNGVMCGSIEHKMGIHGNATCTMNYDGATGWLVGEENKGMQGMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355 L A+ ++ V+ A+ YAR R +SG D+P + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVEYARERLQGRALSGPKATDKPADPIIVHPDIRRALLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A + TAL +A+ +AK R + +M P+ K A A Sbjct: 353 MRAFNEAARALVLWTALKSDVAHRSSDAKERQTADDHLGLMTPVLKGVLTDGGFANAVAA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI + + R++ I G+ LD++ Sbjct: 413 QQVYGGHGYIAANGVEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|71082955|ref|YP_265674.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] gi|91762621|ref|ZP_01264586.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] gi|71062068|gb|AAZ21071.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] gi|91718423|gb|EAS85073.1| acyl-CoA dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] Length = 587 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/326 (22%), Positives = 154/326 (47%), Gaps = 42/326 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + SDG + LSG K F++S +++ I L A Sbjct: 164 LTEPVCGTDLGLLKTKAIEQSDGTFKLSGQKIFITSGDQDLTENIIHLVIARAADSPAGT 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ L EDGS NG+ +++K+G + +AT L F + G+++G + Sbjct: 224 KG-ISLFLVPKFLVNEDGSIGARNGVSTGSIESKMGIKGSATCVLNFDDATGYMIG---L 279 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILID 351 + M ++ L+ ++ + G+ +S ++ YA+ R +I+ Sbjct: 280 KNKGLNAMFTMMNLERIVVGIQGLGISEIAYQNSLSYAKERKQGKTNNTKSTNGADFIIE 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 +++++ ++ I AL F L+ + + K + E + +M P+ K Sbjct: 340 HADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDEKIKQEASDLVSLMTPVVKTMFS 399 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 M + +EAM+ GG GY +++ I + YR++ I G+ + D++ L+ K + Sbjct: 400 DMGMEITSEAMQVHGGYGYTKDQGIEQLYRDNRITPIYEGTNSIQAADLVFRKLVNKNGD 459 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRD 489 + ++ ++ D + +K+ +++ Sbjct: 460 IIDKYLELIKNDCSTENEKLKPFIKE 485 >gi|325092605|gb|EGC45915.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88] Length = 556 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 57/357 (15%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT---------SVAI--GLGLTEKRGG 208 S AL+T P D A K+ R + N + + SVA G +TE++GG Sbjct: 75 SSAALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNRLISRDPSVAWTSGQWMTERKGG 134 Query: 209 TDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--E 250 +D+ + +K+S G + L G KWF S+ ++ IMLA+ + Sbjct: 135 SDVRGTETVARKLSTEEQNAGKGVDELGCPLGPWQLDGFKWFSSATDANMTIMLARTGPD 194 Query: 251 GRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G++ F P R + G+ NG+ QRLKNK+G ++ T ELE G+L+G Sbjct: 195 GQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGTKALPTAELELKGMRGYLIGKEG 254 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------- 353 + + + + + +V G LA + YA+ R G +L + P Sbjct: 255 DGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKVRIAGGRLLTELPAHVRALAREH 314 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCK 406 VM R + +A +A+ +S +S +A S + +A R++ P+ K Sbjct: 315 VMYRGLLHLAHFVASLLGISEGQDSSLTQATQVSILPTNAEQSSALLRLLTPMGKAQTAL 374 Query: 407 MAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + + ME +GG GY+E ++AR +R+ SI G+ + M D++ +++ Sbjct: 375 RSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVLSIWEGTTDIMADDLVRVMK 431 >gi|240279475|gb|EER42980.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143] Length = 556 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 57/357 (15%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT---------SVAI--GLGLTEKRGG 208 S AL+T P D A K+ R + N + + SVA G +TE++GG Sbjct: 75 SSAALVTCPGAMTDGAAKLLGRHLNGANGSIFTEARNRLISRDPSVAWTSGQWMTERKGG 134 Query: 209 TDIAAITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--E 250 +D+ + +K+S G + L G KWF S+ ++ IMLA+ + Sbjct: 135 SDVRGTETVARKLSTEEQNVGKGVDELGCPLGPWQLDGFKWFSSATDANMTIMLARTGPD 194 Query: 251 GRVGCFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G++ F P R + G+ NG+ QRLKNK+G ++ T ELE G+L+G Sbjct: 195 GQISAFYAPLRRRVARGAEGETELNGVRIQRLKNKLGTKALPTAELELKGMRGYLIGKEG 254 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---------- 353 + + + + + +V G LA + YA+ R G +L + P Sbjct: 255 DGVREISTILNITRVHNMSGAVGGWGRGLAISRAYAKVRIAGGRLLTELPAHVRALAREH 314 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCK 406 VM R + +A +A+ +S +S +A S + +A R++ P+ K Sbjct: 315 VMYRGLLHLAHFVASLLGISEGQDSSLTQATQVSILPTNAEQSSALLRLLTPMGKAQTAL 374 Query: 407 MAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + + ME +GG GY+E ++AR +R+ SI G+ + M D++ +++ Sbjct: 375 RSINGVRACMENLGGVGYLENEDPVFNVARIFRDVCVLSIWEGTTDIMADDLVRVMK 431 >gi|4894856|gb|AAD32627.1|AF135399_1 AidB [Thermus thermophilus] Length = 447 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 13/292 (4%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 +TE +GG+D+ A +G + + G K+F S + ++D ++ A+ EG + Sbjct: 128 MTEIQGGSDLGANPHRGPQEGEVWRLYGGDKYFASGAGLADVALVTARPEGAPPGPKGLA 187 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FL+PRL +G N +RLK K G R+ + E+E + +L+G + Sbjct: 188 LFLLPRLDREGRLN-YRVRRLKRKSGTRAVPSGEVELEGSERYLIGRAEEGIYYTLETLT 246 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L +AI ++ +L E RRR G L D P+++ + D+++ A AL+ Sbjct: 247 VSRLANAIAAMGIAAKALLETRERVRRRQSFGRFLADHPLVRYDLLDLSVRQAGGLALAL 306 Query: 375 RLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +FD A + + R ++ + K + + + AME GG G++EE ++ Sbjct: 307 AAVEAFDRAWHERPLTARPTTWPRFLSHLAKNRTAEHSAEITRLAMELFGGLGFLEEYAV 366 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 AR +RES I G N LD+L ++K + LE L G++ Sbjct: 367 ARWHRESLITPIWEGPSNIQALDLLEAMQK-KGAHRPFLAWLEARLKGRGEE 417 >gi|213024630|ref|ZP_03339077.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 120 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 1/99 (1%) Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 TAL FRLA ++ E + ++EA +AR+ P K+ CK +AEAME +GG GY EE Sbjct: 2 TALLFRLARAW-EQRREAKEALWARLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESE 60 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 + R YRE P NSI GSGN M LDVL +L K +++ L Sbjct: 61 LPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVL 99 >gi|237653153|ref|YP_002889467.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gi|237624400|gb|ACR01090.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 595 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 61/337 (18%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK+ S E+ T + LTE + G+D+AA ++ + +DG Y L G Sbjct: 148 RTWLPKVVSGEWGST-------------MNLTEPQAGSDLAATRTRAEPQADGSYKLFGQ 194 Query: 232 KWFLS------SPMSDAFIML------AQVEGRVGCFLVPRLLED-----GSPNGLCYQR 274 K F+S +P ++ A V+G + F+VP+ L + G+ N + Sbjct: 195 KIFISYGEHELTPNIVHLVLARLPDAPAGVKG-LSLFIVPKFLVEPDGSLGARNDVRCIS 253 Query: 275 LKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G + T L F G+L+G+ N +E M + ++ A V + Sbjct: 254 IEHKMGIHGSPTCTLSFGEGGGAIGWLVGEPNRG---LEVM--FVMMNEARFGVGVQGAA 308 Query: 332 LAE-----AIHYARRR--------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 LAE A+ YAR R +G ++ P +KR + + + A L + A Sbjct: 309 LAERAYQMALGYARERVQGRDAVSGAAGRPILCHPDVKRMLLSMRARVMAMRTLLYTAAG 368 Query: 379 SFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 FD A + A Y ++ P+ K WC ++ V EA++ GG G++EE +A+ Sbjct: 369 WFDIAHHHPDAAVADKHRRYVDLLMPVAKGWCTELGNDVCDEAIQVFGGMGFVEETGVAQ 428 Query: 433 HYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE 466 H+R++ +I G+ D++ L E G L E Sbjct: 429 HFRDARIITIYEGTTGIQANDLVGRKILREGGATLRE 465 >gi|169766142|ref|XP_001817542.1| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40] gi|83765397|dbj|BAE55540.1| unnamed protein product [Aspergillus oryzae] Length = 637 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 121/477 (25%), Positives = 203/477 (42%), Gaps = 56/477 (11%) Query: 35 NAYSSD-SLLVALIANFPSV----VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y+SD SL AL P+ +L LGE +S +E + A + P + + Sbjct: 23 NTYTSDTSLQRALSWYLPAQKLEQAQPQLVELGEEAISDQIREWSADAERHQPYVKGFNV 82 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+D ++ W L + G+ S+ +EP + ++ YL + Sbjct: 83 WGQRYDYDRLITSEGWKQLGKWGARHGV-VSL---GYEPTYGAERRLVQYTVNYLYS--P 136 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP-TNKAPMQKTSVAIGLGLTEKR 206 + L S V+ + AL+ A F Y +K TS G +TE+ Sbjct: 137 SSGLYSCPVSMSDGAALVLNQERKNVAADHPFQTAYQKLISKKEDYWTS---GQWMTERA 193 Query: 207 GGTDIAAIT--------SQGQKISDGI----YCLSGHKWFLSSPMSDAFIMLAQV-EGRV 253 GG+D+ S K S+G+ Y ++G K+F S+ ++ +MLA+ G++ Sbjct: 194 GGSDVQNTETWATYSPLSHKSKASNGLDEGDYLINGFKFFSSATDANIALMLAKTPSGKL 253 Query: 254 GCFLVPR----LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 FL P + EDG P NG+ RLKNK+G + T ELE + L+G ++ Sbjct: 254 STFLAPLRKTIVGEDGKPRVVTNGVRIHRLKNKLGTKELPTAELELKDMRAHLVGTVDHG 313 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + + + I S++ R +++ +A+ R G L P+ +AD+ + Sbjct: 314 VMAIAPLLNITRTHTFIGSLAAWRRAISITKSFAKARTTVGEPLWLIPMHLSLLADLEVK 373 Query: 366 IAAATALSF------------RLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVI 412 A L+F ++ ++ +EA R + I K K A A I Sbjct: 374 HRGAMNLAFFTVAVMGVVENNGVSTPAAHLPTKGKEAQVVFRALTAIAKAVISKNAIAGI 433 Query: 413 AEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E E +GG GY++E +IAR R + NSI G+ N + +++ L K NL Sbjct: 434 QECQEGMGGVGYMDEPDEPEFNIARLLRNTAVNSIWEGTTNVLASELVRFLVKRDNL 490 >gi|163795812|ref|ZP_02189776.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199] gi|159178845|gb|EDP63381.1| acyl-CoA dehydrogenase [alpha proteobacterium BAL199] Length = 597 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 66/391 (16%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T A++ AL + T + PK+ + E+ T + LTE + GT Sbjct: 125 LCPLLTQAAIDALREVGTDEQKATYLPKLVTGEWTGT-------------MNLTEPQAGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA------QVEGRVGC--FLV 258 D+ AI ++ +K+ DG Y L G K F++ +D I L + G G ++V Sbjct: 172 DLGAIRTRAEKVDDGSYRLRGQKIFITYGDHDFTDNIIHLVLARSPDGIAGTKGLSLYIV 231 Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGP 308 P+ L + P+G R L++K+G ++ T + + G +L+G+ N Sbjct: 232 PKFLVN--PDGSLGARNDAKPLSLEHKLGIHASPTCIMAYGENEGAVAYLVGEENRG--- 286 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVM 355 +E M I +++A ++V +++AE A +AR R S + +I P + Sbjct: 287 IEYM--FIMMNNARLAVGLQGLAVAERAYQQAADFARTRVQSRAVQGSTGSVSIIHHPDV 344 Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R + + I A L + +A D +A +R+ A ++ P+ K WC A Sbjct: 345 RRMLLTMKAQIEAMRGLIYDVAAGIDIADRHPDAATRAGAQARVDLLIPVVKAWCTDTAI 404 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQ 467 + + ++ GG G+IEE A+HYR++ I G+ LD++ + G + Sbjct: 405 EICSTNVQVHGGMGFIEETGAAQHYRDARITPIYEGANGVQALDLIGRKVARDGGAAMQG 464 Query: 468 LFSTLEQDLG--SSGKKVITILRDSISLCKE 496 + ++ LG + + I+RD ++ +E Sbjct: 465 FLADVDATLGALADADAPLAIIRDRLASGRE 495 >gi|110680588|ref|YP_683595.1| putative acyl-CoA dehydrogenase family protein [Roseobacter denitrificans OCh 114] gi|109456704|gb|ABG32909.1| putative acyl-CoA dehydrogenase family protein [Roseobacter denitrificans OCh 114] Length = 564 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 41/303 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ + E+ T + LTE + G+D+ A++S+ Q DG Y ++G K ++ Sbjct: 150 PKLIAGEWTAT-------------MNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIYI 196 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279 S D ++LA++ + FLVP+ + + G+ N + L++K+ Sbjct: 197 SWGDHDVADNICHLVLARLPDAPAGTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA---- 335 G + T +++ G+L+G G + M +++A + V G +AEA Sbjct: 257 GLHGSPTAVMQYDGATGWLVG---AKEGGMAAM--FTMMNNARLGVGGQGTGVAEAAYQH 311 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAY 392 + YAR R ++D ++R + + DI AA A+ A + D A ++ A Sbjct: 312 ALSYARERKQGKSAIVDHADVRRMLGTMKADIYAARAIGLSCAVAIDMAHATGSADWQAR 371 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A ++ PI K + AV ++ GG G++EE A++ R+ +I G+ + Sbjct: 372 AALLTPIAKAFGSDTGIAVADAGIQVHGGMGFVEETGAAQYSRDVRVTAIYEGTNGIQAM 431 Query: 453 DVL 455 D++ Sbjct: 432 DLV 434 >gi|115522699|ref|YP_779610.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516646|gb|ABJ04630.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris BisA53] Length = 596 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 47/315 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + GTD+ + ++ K +DG Y ++G K F+ Sbjct: 152 PKMVSGEWTGT-------------MNLTEPQCGTDLGLLRAKAVKQADGSYKITGTKIFI 198 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 S+ D ++LA++EG V F+VP++L EDGS NG+ L++K+ Sbjct: 199 SAGDHDLTENIIHLVLARIEGAPAGIKGVSLFVVPKVLVNEDGSLGERNGVTCGALEHKM 258 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G NAT L + N G+L+G+ N + M L A+ ++ V+ A+ YA Sbjct: 259 GIHGNATCVLNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVIYA 318 Query: 340 RRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFD 381 + R ++G D+P + RA + A TAL +++ D Sbjct: 319 QERLQGRSLTGAKATDKPADPIIVHPDIRRTLLTIRAFNEAARAFVIWTALKGDISHRSD 378 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 +AK R + +M PI K + A A + GG GYI + + + R++ Sbjct: 379 DAKERQAADDHMGLMTPILKGVLTDIGFANAVSAQQVWGGHGYIADNGMEQFVRDARIAM 438 Query: 442 ILLGSGNAMVLDVLN 456 I G+ LD++ Sbjct: 439 IYEGANGIQALDLVG 453 >gi|167045703|gb|ABZ10350.1| putative acyl-CoA dehydrogenase, C-terminal domain protein [uncultured marine bacterium HF4000_APKG2098] Length = 541 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 42/301 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249 LTE GTD+ + ++ + DG + LSG K F++S D ++LA+ + Sbjct: 164 LTESVCGTDLGLLKTKAVEQPDGTFKLSGQKIFITSGDHDLTENIIHLVLARTPEAPPGI 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP++ EDGS NG+ +++K+G R +AT L F G ++G N Sbjct: 224 KG-ISLFLVPKIQVKEDGSLGPRNGVSTGSIESKMGIRGSATCVLNFDGAVGHIIGPKNK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVS----------GGILID 351 + M ++ L+ ++ + G+ ++ A++Y++ R ++ID Sbjct: 283 G---LSSMFTMMNLERIVVGIQGLGLSEIAYQNALNYSKERKQGKSNSSKTKNGADLIID 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 ++R++ ++ I ALSF LA + + K + E +M P+ K Sbjct: 340 HADIRRSLLNMKSIIEGERALSFWLAQQTEVSLHHKDNKIKEEALDLVSLMTPVVKSLFT 399 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 M + ++AM+ GG GY +++ I + YR++ I G+ + +D++ L K N Sbjct: 400 DMGMEITSDAMQIFGGYGYTKDQGIEQLYRDNRITPIYEGTNSIQSIDLVFRKLFNKDRN 459 Query: 464 L 464 + Sbjct: 460 I 460 >gi|327355369|gb|EGE84226.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188] Length = 622 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 109/473 (23%), Positives = 188/473 (39%), Gaps = 69/473 (14%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + PS + ++L VLS + A N P L G D + W Sbjct: 35 LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94 Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163 L R I +G+ + A A + ++ ++S A Sbjct: 95 RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144 Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212 L+T P D A K+ R + + A + + G +TE++GG+D+ Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARNRLISRDPSFAWTSGQWMTERKGGSDVR 204 Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254 + G+K+S G + L G KWF S+ ++ IMLA+ G++ Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264 Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F P R + G+ NG+ QRLKNK+G ++ T ELE G+L+G Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360 + + + + + +V G LA + YA+ R G +L + P RA+A Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384 Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410 ++ +A+ +S +S +A S + A R++ P+ K + Sbjct: 385 GHLNLLHFVASILGISEGQDSSLTQATQASILPTNAQQSGALLRLLTPMGKAQTALRSIN 444 Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ME +GG GY+E +IAR +R+ SI G+ + M D++ +++ Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497 >gi|217970666|ref|YP_002355900.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gi|217507993|gb|ACK55004.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 598 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 163/336 (48%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +TS ++ ALM T + PK+ + E+ T + LTE G+ Sbjct: 125 LCPMLTSGAIEALMLRGTDEQKNLYLPKMIAGEWTGT-------------MNLTEPNAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ ++D I +LA++ EG G F+V Sbjct: 172 DLAAVRTKAEPQGDGTYKIFGQKIFITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVV 231 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + + G+ N + +++K+G ++ T L F + G L+G+ N +E Sbjct: 232 PKFMVNADGSLGARNDVHCVSIEHKLGIHASPTAVLAFGDKGGAIGTLVGEPNRG---LE 288 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGGILID---QPVMK 356 M I ++ A +V ++L+E A+ YA+ R V GG ++ ++ Sbjct: 289 YM--FIMMNEARFAVGMEGLALSERSYQHALQYAKDRIQGTDAGVRGGPKVNILHHADVR 346 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPA 410 R + ++ A AL++ + +FD+A ++EA A+ +M P+ K WC + + Sbjct: 347 RLLMNMKSKTEAMRALAYVVGAAFDKAHHHADEAVRAQNQAFVDLMIPVVKGWCTENSID 406 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V ++ ++ GG G+IEE A+H+R+S +I G+ Sbjct: 407 VTSDGVQVHGGMGFIEETGAAQHFRDSRITTIYEGT 442 >gi|258576001|ref|XP_002542182.1| predicted protein [Uncinocarpus reesii 1704] gi|237902448|gb|EEP76849.1| predicted protein [Uncinocarpus reesii 1704] Length = 524 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 59/331 (17%) Query: 199 GLGLTEKRGGTDIAAITSQGQKIS-------DGI---------YCLSGHKWFLSSPMSDA 242 G +TE++GG+D+ + +K+S DG+ + + G KWF S+ ++ Sbjct: 108 GQWMTERKGGSDVRGTETVARKLSAAEKSESDGVDANSLPLGPWRIDGFKWFSSATDANM 167 Query: 243 FIMLAQV--EGRVGCFLVP--RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNT 294 I+LA+ +G V F P R ++ G+ NG+ QRLKNK+G + T ELE Sbjct: 168 TILLAKTSQDGAVSAFYAPLRRRVKGGNGETELNGIRIQRLKNKLGTKPVPTAELELKGM 227 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 +L+G + + + L +AI A YA+ R V +L+D P Sbjct: 228 RAYLIGKEGQGVKEISTLLNITRLQNAI------------AAAYAKVRMVRNTLLMDMPA 275 Query: 355 MKRAIADIALDIAAATALSFRLAN--SFDEA---------------KSRSEEAAYARIMA 397 R +A + AA L+F LA E +++ E A R++ Sbjct: 276 HVRKLAQDYVKYAANMHLTFLLAALLGLSEGQDSGPTPAARANIVPQTQREAQALLRLLT 335 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLD 453 P+ K A + ME +GG GY+E +IAR +R+S SI G+ + M D Sbjct: 336 PMVKAQTALRAIKGVRACMENLGGVGYLENEDPLFNIARIFRDSCVLSIWEGTTDIMADD 395 Query: 454 VLNLLE--KGTNLFEQLFSTLEQDLGSSGKK 482 ++ + + +G+ L + + LG++ K Sbjct: 396 LIRVAKGREGSECLAVLGAWVSNVLGAADSK 426 >gi|115374699|ref|ZP_01461976.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|310822702|ref|YP_003955060.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115368270|gb|EAU67228.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|309395774|gb|ADO73233.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 614 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/435 (24%), Positives = 194/435 (44%), Gaps = 74/435 (17%) Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLE-------AGHLMSPSVT--SASMVALMTTPR 169 ++++ F+ V Q H + A + L +E A M P + +A ++A TP Sbjct: 89 LYEQGFKTVGVSQEHGGQGAPMMLQMAVEEMLCGANAAFNMYPGLAYGAAELIAECGTPE 148 Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + ++ + + T + LTE + G+D+ A + ++ +DG Y + Sbjct: 149 QKHHYVERMLNGTWGGT-------------MCLTEPQAGSDVGAAKTTARRNADGTYNIR 195 Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR-VGC-----FLVPRLL--EDGSP---NGLCYQ 273 G K F+S+ D ++LA+VEG VG F+VP+L +DGS N + Sbjct: 196 GTKIFISAGDHDLAENIIHLVLARVEGAAVGTKGLSLFIVPKLRINKDGSAGPSNDVALG 255 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 +++K+G ++T L F +G+L V ++ ++ A ++V V+LA Sbjct: 256 SIEHKMGINGSSTCVLNFGENDA-CVGELVGGVEHVGMSQMFKMMNGARIAVGIQGVALA 314 Query: 334 -----EAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRL 376 A+ YA+ R G +I+ P ++R + +I + AL F+L Sbjct: 315 SAAYFNALDYAKERKQGGSFTKWKDPASPRVPIIEHPDVRRMLLEIKSHVEGIRALIFKL 374 Query: 377 ANSFDEAKS----RSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A D+AK ++AAY R ++ P+ K + A + A+A++ GG+G+ ++ Sbjct: 375 AMHTDKAKQLAGKDDDKAAYHRGQVEVLTPLVKAYGSDQAFRLCAQAIQIYGGAGFCQDY 434 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 + ++ R+S SI G+ + +D++ L + G F+Q +D+G I Sbjct: 435 PVEQYCRDSKIFSIYEGTNHIQAMDLVGRKLGQAGGANFQQFM----EDVGG----FIEA 486 Query: 487 LRDSISLCKEDKGLA 501 RD + E K LA Sbjct: 487 NRDHKTFGTEVKVLA 501 >gi|254465242|ref|ZP_05078653.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium Y4I] gi|206686150|gb|EDZ46632.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium Y4I] Length = 593 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 50/356 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ + ++ + +DG + +SG K F+SS D ++LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSFRISGQKIFISSGDHDMAENIVHLVLAKIPGGPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L EDGS NG+ +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFLVNEDGSLGERNGVSVGKIEEKMGIHGNSTCVMNYDGAVGYLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351 + M + + ++ + A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARVGVGMQGLAQAEAAYQNALEYAKDRLQGRDVTGAKNPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R++ D A A A D+A ++ A I M P+ K + Sbjct: 341 HPDIRRSLMDQKSFAEGARAFLLWGATLIDQAHRAGDKDADGLISLMTPVIKGFLTDQGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + +A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKI--ALASSAAALYRAGM 522 + LG G K + D + S C+E+K ++ T+ L +++ L AGM Sbjct: 448 ----RKLGQHGGKYVLAFFDMVKSFCQENKDISEDYTKDFIKPLQAASKDLQAAGM 499 >gi|312114716|ref|YP_004012312.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311219845|gb|ADP71213.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 597 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 103/419 (24%), Positives = 181/419 (43%), Gaps = 68/419 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T A + AL+ + + + PK+ S E+ MQ LTE + G+ Sbjct: 124 LNPLLTQAGVHALIAHGSEPLQTQYLPKLISGEW----TGSMQ---------LTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVE------GRVGC--FLV 258 D+ + ++ + DG Y L+G K F++ PM+D I L G G F+V Sbjct: 171 DLRFLKTRATPVGDGTYKLTGTKIFITYGEHPMTDNIIHLVLARMPDAPFGTKGISLFVV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + + G N + +L++K+G + T + F + G+L+G+ N + Sbjct: 231 PKFIPNADGSLGERNDVMAAKLEHKLGIHGSPTCVMNFGDRGGATGWLVGEPNGGLKAMF 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGGI------LIDQPVMKRAIA 360 M L I V + +A+ YAR R SGG +I+ P + R + Sbjct: 291 TMMNEARLGVGIQGVGIGERAFQQALDYARDRRQGAPESGGAADASVAIIEHPDVVRMLL 350 Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ +AA A+++ + + D +A R A A ++ PI K +E Sbjct: 351 NMKSKTSAARAIAYTTSVAIDISHRAADASERKRAANEAALLTPIAKAVSTDFGVETASE 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 ++ GG G+IEE A+HYR++ I G+ +D++ L G F + + L Sbjct: 411 GIQVHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVTRKLPLAGGETFREFLAGL 470 Query: 473 EQ-----------DLGSSGKKVITILRDSISLCKEDKG-LARFLTEKIALASSAAALYR 519 ++ LG +G+ L +SI+ +E G L R L E A A + A ++ Sbjct: 471 KETAREVASSNDDGLGHTGE----CLWESITALEETGGWLTRQLAENRAAALAGATPFQ 525 >gi|86137376|ref|ZP_01055953.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] gi|85825711|gb|EAQ45909.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] Length = 593 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/338 (24%), Positives = 147/338 (43%), Gaps = 45/338 (13%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M +T + A++ T + + PK+ S E+ T + LTE G Sbjct: 123 VMYQGLTHGAAAAILAHGTDQQKDTYLPKMVSCEWTGT-------------MNLTEPHCG 169 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ + DG Y +SG K F+S+ M+D I +LA++ G V F+ Sbjct: 170 TDLGLMRTKAEPQDDGSYKVSGQKIFISAGDHDMADNIIHLVLAKIPGGPDGIKGVSLFI 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ + EDG+P NG+ ++ K+G N+T + + G+LLGD + + M Sbjct: 230 VPKFVLNEDGTPGPRNGVSVGNIEKKMGIHGNSTCVMNYDEATGYLLGDAHKGMRAMFTM 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIA 360 L + VS + A+ YA+ R V+G LI P ++R++ Sbjct: 290 MNEARLGVGMQGVSQAEAAYQNAVEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRSLM 349 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMEC 418 D + A + D+A + A ++ P+ K + + +A + Sbjct: 350 DQKSFVEGGRAFLLWGSTMIDQAHRDGNKDADGLVSLLTPVIKGFLSDEGYDMTVKAQQV 409 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 YGGHGYIEEHGMSQYTRDARIAQIYEGANGVQALDLVG 447 >gi|254476967|ref|ZP_05090353.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11] gi|214031210|gb|EEB72045.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11] Length = 568 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 35/321 (10%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + + DG Y +SG K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPLDDGTYAISGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA+ V G G FLVP+ L D G N L L++K+ Sbjct: 197 SWGDNDFTQNVCHLVLARLPDAVPGTKGISLFLVPKFLPDAEGNPGKANSLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+++G + M L V + +A+ YA Sbjct: 257 GLHGSPTCVMQYDGAIGWMVGKPGGGLAAMFTMMNNARLGVGGQGVGVAGAAYQKALAYA 316 Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R + G ++D ++R + ++ D+ AA A+ + + D A + AA A Sbjct: 317 LERKQGKSASGTIVDHADVRRMLMEMKADLFAARAILLACSQAIDMQTATGAQDWAARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI K + + V ++ GG G+IEE A+ YR+ +I G+ +D+ Sbjct: 377 FLTPIAKAFGTETGMRVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDL 436 Query: 455 LNL-LEKGTNLFEQLFSTLEQ 474 + + G ++ +L +E+ Sbjct: 437 VGRKMMDGGDMAHRLIDEIEE 457 >gi|121713392|ref|XP_001274307.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus clavatus NRRL 1] gi|119402460|gb|EAW12881.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Aspergillus clavatus NRRL 1] Length = 643 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 118/495 (23%), Positives = 201/495 (40%), Gaps = 91/495 (18%) Query: 35 NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y+SD+ L ++A + PS +++ ++ LGE +S +E + A N P + +Y Sbjct: 22 NTYTSDATLHRVLAWYLPSDINQSIQPNLTQLGEEAISPQIREWSADAERNQPYVKSYNV 81 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+D ++ W L R G+ ++ ++ R + Q Sbjct: 82 WGQRYDYDRLVTSEGWKQLGRWGARHGVVAIGYEPTYGASRR-------------LVQYA 128 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI--------- 198 +L SPS S A MT D A I S++ + P A+ Sbjct: 129 VNYLYSPSSGLTSCPAAMT------DGAALILSQQLQ-QHSYPADHPFRAVYARLISRTE 181 Query: 199 -----GLGLTEKRGGTDIAAITSQGQ------------KISDGIYCLSGHKWFLSSPMSD 241 G +TE+ GG+D+ + +SDG Y ++G K+F S+ ++ Sbjct: 182 DCWTSGQWMTERAGGSDVQNTETWATYSPLPSSSSSSDALSDGAYTINGFKFFSSATDAN 241 Query: 242 AFIMLAQVE--GRVGCFLVP--RLLEDGSP------------NGLCYQRLKNKIGNRSNA 285 ++LA+ G++ FL P R + +P NG+ RLKNK+G + Sbjct: 242 VTLLLAKTSPSGKLSTFLAPLRRTIPIPAPTNPQTTTTKQVANGVRIHRLKNKLGTKELP 301 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 T ELE L+G+ + + + + I S+ R +L+ A +AR R Sbjct: 302 TAELELHGMRAHLVGEPEKGVATIAPLLNVTRTHTFIGSLGAWRRALSIAKAFARARSTV 361 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYA----- 393 G L P+ R +A++ AA + F + N D + + AA+ Sbjct: 362 GEPLWLIPMHLRLLAELEARHRAALQVGFFTVAVMGAVENPADGGEGSARPAAHVPRGRE 421 Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSIL 443 R + K KMA I E E +GG GY++E ++AR R + NSI Sbjct: 422 ATVVFRALTAAAKAVVSKMAVLGIQECQEALGGVGYMDEADEPEFNVARLLRNTAVNSIW 481 Query: 444 LGSGNAMVLDVLNLL 458 G+ N + +++ L Sbjct: 482 EGTTNVLASELVRFL 496 >gi|56479154|ref|YP_160743.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56315197|emb|CAI09842.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 597 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 98/399 (24%), Positives = 179/399 (44%), Gaps = 63/399 (15%) Query: 91 GERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 G +WD KV P W R+ G D + + ++ A + Sbjct: 64 GAKWDHGKVTTAPGWKEAYRQFSEAGWTAVAGDPEYGGQGLPKLLSTAVMEMWKAANM-- 121 Query: 149 GHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 + P +T+ ++ VAL + + PK+ S E+ T + LTE + Sbjct: 122 AFSLCPMLTNGAIEAVALRGSDEQKAAYLPKMISGEWTGT-------------MNLTEPQ 168 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255 G+D+AA+ ++ + DG Y L G K F++ D ++LA++ EG G Sbjct: 169 AGSDLAAVRTRAEPQGDGTYRLFGQKIFITYGEHDLTDNIVHLVLARLPDAPEGVKGISL 228 Query: 256 FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 F+VP+ L DG+P N + +++K+G ++ T L F ++ G L+G+ N Sbjct: 229 FVVPKFLLNADGTPGERNDVQCVSIEHKLGIHASPTCVLAFGDSGGAIGTLVGEANRG-- 286 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGG---ILIDQP 353 +E M I ++ A +V ++L+E A+ YA+ R V GG ++ P Sbjct: 287 -LEYM--FIMMNEARFAVGMEGLALSERAYQHALAYAKDRVQGTEAGVRGGPKVSILHHP 343 Query: 354 VMKRAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A AL++ LA+ +A R+++ A+ +M P+ K WC + Sbjct: 344 DVRRMLMSMKSQTEAMRALAYVVGAATDLAHRHPDAAVRAQKQAFVDLMIPVVKGWCTEN 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + + ++ GG G+IEE A+H R++ +I G+ Sbjct: 404 SIDIASTGVQVHGGMGFIEEAGAAQHLRDARITTIYEGT 442 >gi|163742451|ref|ZP_02149838.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] gi|161384401|gb|EDQ08783.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] Length = 590 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 36/290 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR-- 252 + LTE + G+D+ + + + +DG Y +SG K F++ +S+ I +LA+ G Sbjct: 161 MNLTEPQAGSDLGRVRCKAEPRADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPD 220 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ L +DG+P N + +++K+G R++ T LE+ N G+L+G+ N Sbjct: 221 GHRGLSLFLVPKFLVDQDGTPGDRNSVNCVSIEHKLGVRASPTAVLEYDNATGYLIGEEN 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LID 351 +E M ++ + V G+ VS A+ YA+ R I +I Sbjct: 281 RG---LEYMFTMMNAARFAVGVQGVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIG 337 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCK 406 P ++R + + + +LS A D +++ R+E A A + P+ K +C + Sbjct: 338 HPDVRRMVLRMRALVEGGRSLSMAAAGWLDLSQNGDDDIRAETAPVAEFLVPLVKAFCSE 397 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A V + ++ GG G+IEE +A+ YR++ I G+ D+L Sbjct: 398 RAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLG 447 >gi|282857316|ref|ZP_06266553.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455] gi|282584816|gb|EFB90147.1| acyl-CoA dehydrogenase [Pyramidobacter piscolens W5455] Length = 377 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 27/264 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 GLTE G+D AAI S +K DG Y L+G K W +S ++D ++++A+ + G Sbjct: 119 FGLTESNAGSDAAAIKSVAEKQPDGGYILNGSKAWITNSGVADYYLIMAKTDPAAGNHGI 178 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ E GL + + K+G R AT EL F N L D V M Sbjct: 179 SVFVVPKDAE-----GLTVGKFEKKMGMRGTATCELSFDNVR--LPADSLVGDEGKGFMI 231 Query: 314 ILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD A +S+ M+ ++ +A YAR R G + + AD+A I A Sbjct: 232 AMQALDGARISIGAIASGLMQHAMDKAAAYARERTTFGKPIARHQAVGFKFADMAAKIRA 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + + K S EAA +++A W C+ V + ++ GG+GY E Sbjct: 292 TDLMVWDTCELKRQGKRFSVEAAELKLLAS---RWACE----VCDDCIQIFGGNGYSAEF 344 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 + R YR+ A + +G G + +L Sbjct: 345 DVERFYRD--AKLLEIGEGTSEIL 366 >gi|163739943|ref|ZP_02147349.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107] gi|161386817|gb|EDQ11180.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107] Length = 590 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 36/290 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR-- 252 + LTE + G+D+ + + + +DG Y +SG K F++ +S+ I +LA+ G Sbjct: 161 MNLTEPQAGSDLGRVRCKAEPRADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPD 220 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ L +DG+P N + +++K+G R++ T LE+ N G+L+G+ N Sbjct: 221 GHRGLSLFLVPKFLVDQDGTPGDRNSVNCVSIEHKLGVRASPTAVLEYDNATGYLIGEEN 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LID 351 +E M ++ + V G+ VS A+ YA+ R I +I Sbjct: 281 RG---LEYMFTMMNAARFAVGVQGVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIG 337 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCK 406 P ++R + + + +LS A D +++ R+E A A + P+ K +C + Sbjct: 338 HPDVRRMVLRMRALVEGGRSLSMAAAGWLDLSQNGDDDIRAETAPVAEFLVPLVKAFCSE 397 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A V + ++ GG G+IEE +A+ YR++ I G+ D+L Sbjct: 398 RAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLG 447 >gi|119383188|ref|YP_914244.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119372955|gb|ABL68548.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 563 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 32/299 (10%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+T++ ++ DG Y ++G K F+ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALTTKAERAEDGSYRVTGQKIFI 196 Query: 236 SSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279 + SD ++LA++ +G G F+VP+ + D G N L L++K+ Sbjct: 197 TWGDSDVTENVCHLVLARLPDGAAGTRGISLFMVPKFIPDEAGRPGIANDLRVVSLEHKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T + F G+L+G+ + + M L + V+ +L +A+ YA Sbjct: 257 GIHGSPTCVMSFEGAKGWLVGEEHKGMAAMFTMMNAARLGVGVQGVAQAEAALQQAVAYA 316 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMA 397 R V G +I P ++R +A+ ++ AA A+ A + D A++ E AA A + Sbjct: 317 AER-VQMGPIIRHPDVRRMLAESRAEVFAARAICLGCAVALDMARATGSEEWAARAAFLT 375 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + V A++ GG GYIEE A++ R+ +I G+ +D++ Sbjct: 376 PIAKAHGTDVGIRVADTAVQVHGGMGYIEETGAAQYLRDVRITAIYEGTNGIQAMDLVG 434 >gi|163745662|ref|ZP_02153022.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] gi|161382480|gb|EDQ06889.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] Length = 575 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 49/331 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y +SG K ++ Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSRAEDNGDGTYAVSGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKI 279 S +D ++LA++ G + FLVP+ + E+G P NG+ L++K+ Sbjct: 197 SWGDNDFAGNVCHLVLARLPGAPAGTKGISLFLVPKFIPDENGEPGQRNGVSVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334 G + T +++ G+++G + +++A + V + AE Sbjct: 257 GLHGSPTAVMQYDKATGWMIGREGGGMA-----AMFTMMNNARLGVGEQGIGAAEGAYQL 311 Query: 335 AIHYARRRHV------SG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 A+ YA R SG G ++D ++R + + DI A+ A++ A + D A++ Sbjct: 312 ALDYALERKQGRSPVESGTGTIVDHADVRRMLLSMKADIFASRAIALSCAYASDMARAGQ 371 Query: 388 --EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 E AA A + PITK + + +V ++ GG G+IEE A+ R+ +I G Sbjct: 372 GDEWAARAAFLTPITKAFGTDVGMSVAEMGVQVHGGMGFIEETGAAQFSRDVRVTAIYEG 431 Query: 446 SGNAMVLDVLNL-LEKGTNLFEQLFSTLEQD 475 + +D++ + G +L +E D Sbjct: 432 TNGIQAMDLVGRKMMDGGEAANRLLDEIEAD 462 >gi|170741462|ref|YP_001770117.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168195736|gb|ACA17683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 597 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 99/405 (24%), Positives = 169/405 (41%), Gaps = 61/405 (15%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M P +T +M AL+ VH A K R Y P M + S + LTE GTD+ Sbjct: 126 MYPGLTQGAMAALL----VHGTDAQK---RTYLPR----MIEGSWTGTMNLTEPHCGTDL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260 + ++ DG Y L+G K F+S+ D ++LA++EG + F+VP+ Sbjct: 175 GLLKTRAVPNPDGSYSLTGTKIFISAGEHDLSENIIHLVLARIEGAPAGTKGISLFVVPK 234 Query: 261 LLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 LL +G + NG+ +++K+G +NAT + + G+L+G+ N + M Sbjct: 235 LLVNGDGSLGARNGVSCGSIEHKMGIHANATCVMNYDGAKGWLVGEANRGLNAMFVMMNE 294 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VMKR 357 L I ++ V+ A+ YA+ R ++G D+P + R Sbjct: 295 ARLAVGIQGLALSEVAYQNAVAYAKERLQGRALTGAKAPDKPADPIIVHPDVRRTLLSIR 354 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A + + TAL +A+ +A R + +M P+ K A +A + Sbjct: 355 AFNEAGRALVLWTALQADVAHRSGDAAERQAADDHMGLMTPVVKGVLTDRGFANAVDAQQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG GYIEE +++ R++ I G+ +D++ L +D Sbjct: 415 MFGGHGYIEEWGMSQFVRDARIAQIYEGANGIQAMDLVG-------------RKLPRD-- 459 Query: 478 SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGM 522 G+ ++ L++ CKE+ T LA + L +A M Sbjct: 460 -GGRAMMRFLQEVEGFCKENGADETLKTYTAPLAKALGDLQKATM 503 >gi|108760804|ref|YP_634058.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108464684|gb|ABF89869.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 395 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 30/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GR----VGC 255 LTE G+D+A + + + D Y L+G K F+++ + + + A V+ G+ + C Sbjct: 141 LTEPEAGSDVANMQTTARLDGDH-YVLNGAKCFITNGGQASQYTVFATVDKGKKHKGITC 199 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308 F+V +G P GL + +NK+G R++ TV L F +N G ++ Sbjct: 200 FVV-----EGRPEGLSVSKHENKMGQRASETVSLTFEDVRVPVANRIGEEGQGFAIAMAT 254 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +++ + L +A+ SV R +L ++ Y+ +R G +I+ ++ IAD+A++ A Sbjct: 255 LDNSRPL----TAMFSVGIARAALEHSMEYSTQRRTFGKPIIEHQAIQFMIADMAMNTHA 310 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++ A DE K S +++YA+ A MA V +A++ GG GYI+E Sbjct: 311 ARMLTYESAWLLDEGKRNSLQSSYAKCFA-------ADMAMKVATDAVQVYGGYGYIKEY 363 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + + R++ + G+ L + L K Sbjct: 364 PVEKLMRDAKLIQVYEGTSQVQRLVIARELFK 395 >gi|84683803|ref|ZP_01011706.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84668546|gb|EAQ15013.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2654] Length = 592 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 152/345 (44%), Gaps = 41/345 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE GTD+ + ++ + DG Y +SG K F+S+ MS+ I +LA++ G Sbjct: 161 MNLTEPHSGTDLGLMRTKAEPQEDGTYKISGQKIFISAGDHDMSENVIHLVLAKIPGGPD 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L EDGS NG+ L+ K+G NAT + + G+LLG + Sbjct: 221 GIKGVSLFIVPKFLVKEDGSLGERNGVSVGALEEKMGIHGNATCVMNYDEATGYLLGTEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354 + M L + + + A+ YAR R V+G D+P Sbjct: 281 KGMRAMFTMMNEARLGVGVQGLGQATAAYQNALEYARDRLQGRAVTGVEAPDKPADPIIV 340 Query: 355 ---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAP 409 ++RA+ D I A A A D ++ +E A ++ P+ K + Sbjct: 341 HPDIRRALLDQKSFIEGARAFVLWSAELIDRSQRNGDEEAEGLVSLIIPVLKGFLTDKGL 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG----TN 463 +A + GG GYIEE +++ R+S I G+ LD++ L + G Sbjct: 401 ESAVQAQQVFGGHGYIEEWGMSQFVRDSRIAMIYEGANGIQALDLVGRKLAQDGGKHVMG 460 Query: 464 LFEQLFSTLEQDLGSSGKKV--ITILRDSISLCKEDKGLARFLTE 506 FE + S ++++ G+ K + L+D+ K+ +G A F + Sbjct: 461 FFEMIKSFIKENEGNEALKADFLDPLKDA---SKDLQGAAMFFMQ 502 >gi|84515814|ref|ZP_01003175.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis SKA53] gi|84510256|gb|EAQ06712.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis SKA53] Length = 568 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 37/317 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + DG Y ++G K ++ Sbjct: 150 PKLISGEWCGT-------------MNLTEPQAGSDVGALRTKAEPNGDGTYAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA++ G + F+VP+L+ D G N L L++K+ Sbjct: 197 SWADNDFTANVCHLVLARLPGANPGTKGISLFMVPKLIPDADGNPGRKNDLRVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +E++ G+L+G + + M L + + +L A+ YA Sbjct: 257 GLHGSPTAVMEYAGATGWLVGPEHGGMAAMFTMMNNARLGVGMQGIGTAERALQHALAYA 316 Query: 340 RRRHV----SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394 + R G +I+ ++R + + DI AA A++ A + D A + + A AR Sbjct: 317 QDRKQGRADGTGAIIEHADVRRMLTTMRADIYAARAIALMNAVAIDMATATHDPAWTARA 376 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 + PITK + + ++ GG G+IEE A+ R+ ++I G+ +D Sbjct: 377 AFLTPITKAFGTDVGVEATNTGVQIHGGMGFIEETGAAQFVRDVRVSTIYEGTNGIQAMD 436 Query: 454 VL--NLLEKGTNLFEQL 468 ++ L++ G F L Sbjct: 437 LVARKLMDGGDAAFRLL 453 >gi|261196950|ref|XP_002624878.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239596123|gb|EEQ78704.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] Length = 622 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 188/473 (39%), Gaps = 69/473 (14%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + PS + ++L VLS + A N P L G D + W Sbjct: 35 LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94 Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163 L R I +G+ + A A + ++ ++S A Sbjct: 95 RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144 Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212 L+T P D A K+ R + + A + + G +TE++GG+D+ Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARNRLISRDPSFAWTSGQWMTERKGGSDVR 204 Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254 + G+K+S G + L G KWF S+ ++ IMLA+ G++ Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264 Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F P R + G+ NG+ QRLKNK+G ++ T ELE G+L+G Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360 + + + + + +V G LA + YA+ R G +L + P RA+A Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384 Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410 ++ +A+ +S + +A S + +A R++ P+ K + Sbjct: 385 GHLNLLHFVASLLGISEGQDSRLTQATQASILPTNAQQSSALLRLLTPMGKAQTALRSIN 444 Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ME +GG GY+E +IAR +R+ SI G+ + M D++ +++ Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497 >gi|291336326|gb|ADD95886.1| acyl CoA dehydrogenase [uncultured marine bacterium MedDCM-OCT-S08-C1068] Length = 587 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/320 (22%), Positives = 150/320 (46%), Gaps = 42/320 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + SDG Y +SG K F++S +++ I L A Sbjct: 164 LTEPVCGTDLGLLKTKAAQQSDGTYKISGQKIFITSGDHDLTENIIHLVLARSTDSPAGT 223 Query: 250 EGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ + +DG+ NG+ +++K+G + +AT L F G+++G + Sbjct: 224 KG-ISLFLVPKFIVNDDGTVGQRNGISTGSIESKMGIKGSATCVLNFDEATGYMIGSKDK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVS----------GGILID 351 + M ++ L+ ++ + G+ +S ++ YA+ R +I+ Sbjct: 283 G---LNAMFTMMNLERIVVGIQGLGISEIAYQNSLAYAKERKQGKTNNTKSTNGADFIIE 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 +++++ ++ I AL F L+ + + K + E + Y +M P+ K Sbjct: 340 HADIRKSLLNMKSIIEGERALCFWLSQQTEVSLYHPDDKIKQEASDYVSLMTPVVKSLFT 399 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 +A + +AM+ GG GY +++ I + YR++ I G+ + D++ L K N Sbjct: 400 DLAMEITNDAMQIHGGYGYTKDQGIEQLYRDNRITPIYEGTNSVQAADLVFRKLSNKNGN 459 Query: 464 LFEQLFSTLEQDLGSSGKKV 483 + ++ ++ + S +KV Sbjct: 460 IIQKFLDMVKVETDSKNEKV 479 >gi|239609710|gb|EEQ86697.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3] Length = 622 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 187/473 (39%), Gaps = 69/473 (14%) Query: 46 LIANFPSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG--ERWDKVEFHPAW 103 L + PS + ++L VLS + A N P L G D + W Sbjct: 35 LPSPLPSSIDEDLSRFSRLVLSRSHMAYTAEAERNQPYLRPLSTFGVENNQDPLVTSEGW 94 Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVA 163 L R I +G+ + A A + ++ ++S A Sbjct: 95 RKLQDRGIEEGMVA---------LAYADAQSHNGGNTGTQLNNRAYQFIKYALWTSS-AA 144 Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-----------GLGLTEKRGGTDIA 212 L+T P D A K+ R + + A + + G +TE++GG+D+ Sbjct: 145 LVTCPSAMTDGAAKMLGRHLNGPDGAIFTEARKRLISRDPSFAWTSGQWMTERKGGSDVR 204 Query: 213 AITSQGQKISD----------------GIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG 254 + G+K+S G + L G KWF S+ ++ IMLA+ G++ Sbjct: 205 GTETVGRKLSVEEQNASKGVDELGYPLGPWQLDGFKWFSSATDANMAIMLAKTGPNGQIS 264 Query: 255 CFLVP--RLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F P R + G+ NG+ QRLKNK+G ++ T ELE G+L+G Sbjct: 265 TFYAPLRRKVPGGAEGETELNGVRIQRLKNKLGTKTLPTAELELKGMRGYLIGKEGDGVR 324 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA------- 360 + + + + + +V G LA + YA+ R G +L + P RA+A Sbjct: 325 EISTLLNITRVHNMAGAVGGWARGLAISRAYAKVRVARGKLLTEMPAHVRALARDHVMYR 384 Query: 361 ---DIALDIAAATALSFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPA 410 ++ +A+ +S + +A S + A R++ P+ K + Sbjct: 385 GHLNLLHFVASLLGISEGQDSRLTQATQASILPTNAQQSGALLRLLTPMGKAQTALRSIN 444 Query: 411 VIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ME +GG GY+E +IAR +R+ SI G+ + M D++ +++ Sbjct: 445 GVRACMENLGGVGYLENEDPVLNIARIFRDICVLSIWEGTTDIMADDLVRVVK 497 >gi|254449900|ref|ZP_05063337.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus 238] gi|198264306|gb|EDY88576.1| acyl-CoA dehydrogenase family protein [Octadecabacter antarcticus 238] Length = 566 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 37/317 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ S+ + DG Y +SG K ++ Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALRSKAEPNDDGSYAISGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKI 279 S +D ++LA++ +G G F+VP+L+ D G+P N L L++K+ Sbjct: 197 SWADNDFTENVCHLVLARLPDGVAGTKGISLFMVPKLIPDADGNPGERNDLRVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +E++ G+L+G+ + + M L A + + A+ YA Sbjct: 257 GLHGSPTAVMEYAGAKGWLVGEKHAGLAAMFTMMNNARLGVATQGIGVAEAAYQHALAYA 316 Query: 340 --RRRHVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394 R++ +GG + + ++R +A + DI A A+S A + D + + + AR Sbjct: 317 MDRKQGKAGGTGTIAEHADVRRMLASMKADIFTARAISLANAVAIDMSNATGDAGWKARA 376 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++ PI+K + + + + ++ GG G+IEE A++ R+ +I G+ +D Sbjct: 377 ALLTPISKAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMD 436 Query: 454 VL--NLLEKGTNLFEQL 468 ++ +++ G F L Sbjct: 437 LVARKMMDGGDAAFALL 453 >gi|73541828|ref|YP_296348.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72119241|gb|AAZ61504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 600 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + + P++ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDELKQRYLPRLIAGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ ++ +DG Y +SG K F++ D ++LA+ EG G FLV Sbjct: 171 DLALVRSRAERQADGSYKVSGTKIFITYGEHDMAENIVHLVLARTPDAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVECVSIEHKLGIKASPTAVLQFGDNGGAIGYLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M +++ + V G+ +S +A+ YA+ R S + +I P ++R Sbjct: 288 YMFVMMNAARFGVGVQGIAISDRAYQQAVAYAKERVQSRPVDGSSKDAVTIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + ++ A AL+ LA+ +A++R+ A + P+ K W +M+ V Sbjct: 348 LIEMRALTEGARALALVAAGYSDLAHQSPDAETRAHYGAAYEYLVPVIKGWSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A+HYR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|99081398|ref|YP_613552.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040] gi|99037678|gb|ABF64290.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040] Length = 593 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 97/398 (24%), Positives = 165/398 (41%), Gaps = 66/398 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264 + DG Y ++G K F+S+ MS+ I +LA++ G V F+VP+ + ED Sbjct: 179 AEPQDDGSYLVTGQKIFISAGDHDMSENVIHLVLAKIPGGPDGIKGVSLFIVPKFIVNED 238 Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 G+P NG+ +++ K+G N+T + + G+LLGD++ + M L Sbjct: 239 GTPGERNGVSVGKIEEKMGIHGNSTCVMNYDGAKGWLLGDMHKGMRAMFTMMNEARLGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAA 369 + ++ + A+ YA+ R V+G LI P ++R + D A Sbjct: 299 MQGLAQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D+A ++ A I + P+ K + + +A + GG GYIEE Sbjct: 359 RAFILWGATMIDKAHRSGDKDADGLISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 ++++ R++ I G+ LD++ L QD GK V+ Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462 Query: 488 RDSISLCKED----KGLARFLTEKIALAS---SAAALY 518 CKE+ A+ E + AS AA +Y Sbjct: 463 DMVKGFCKENAEISDAYAKDFIEPLKAASKDLQAAGMY 500 >gi|229590748|ref|YP_002872867.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas fluorescens SBW25] gi|229362614|emb|CAY49522.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Pseudomonas fluorescens SBW25] Length = 582 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 41/346 (11%) Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225 P + + P+I S + PT + LTE + G+D+ + + + +DG Sbjct: 144 AAPWLQARYLPEIVSGQTLPT-------------MCLTEPQAGSDVGLLRCRAEPQADGS 190 Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQR 274 Y LSG K F+S D ++LA+V + FLVP+ L+DG PNG+ Sbjct: 191 YRLSGSKIFISGGEHDLTANILHLVLARVPDAPPGSRGISLFLVPKQLDDGQPNGVRCDG 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT L F G+L+G N + M L + + + + Sbjct: 251 IEHKMGIKGSATCSLVFDGAQGWLIGATNRGLAAMFVMMNSARLHVGLQGLGHVEAAWQN 310 Query: 335 AIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 A YA R + + P M+R + ++ A+ + A+ D Sbjct: 311 ARQYAAERLQMRAPSRPEEVVAQAADPIRYHPAMRRVLLELRTTSEGMRAIGYWAAHLLD 370 Query: 382 EAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +A+ S A A ++ PI K + + + A++ GG GY+ E +I + R+S Sbjct: 371 QAEHDQDSSAAQLAPLLTPIIKAFFTEQGFRQASHALQVFGGYGYVTEFAIEQTLRDSRI 430 Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 I GS D+L +L F L + G G+ V Sbjct: 431 AMIYEGSNEIQANDLLLRKVLGDEGRAFGLLLDAFRAEAGQGGQSV 476 >gi|118389496|ref|XP_001027832.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila] gi|89309602|gb|EAS07590.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 621 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 100/433 (23%), Positives = 171/433 (39%), Gaps = 59/433 (13%) Query: 55 HKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDG 114 K+LE LG+ ++ +LA+ PQL + G R DK+ AWH + S G Sbjct: 60 QKDLEKLGDLAVNKML-DLAKQCEREQPQLVQFDAYGRRIDKLNLSNAWHKMHEISAEQG 118 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH--K 172 + + +D P + A I+ +LY+ + +G P + ++T H K Sbjct: 119 IVATAYD----PQNGQYARLIQLIKLYIYST-SSGLYGCPLAMTDGASYVLTQVLAHDSK 173 Query: 173 DWAPKIFSREYDPTNKAPMQKTSV--AIGLGLTEKRGGTDIAAIT-SQGQKISDGIYCLS 229 K+ + D N + G +TEKRGG+D++ T + Y L Sbjct: 174 VLDKKVIGKIQDALNHLTTYNPAEFWTSGQWMTEKRGGSDVSGSTETVAVNYKPNKYRLY 233 Query: 230 GHKWFLSSPMSDAFIMLAQV--EGR-----------------------VGCFLVPRLLED 264 G+KWF S+ + LA++ EG + FL+ +D Sbjct: 234 GYKWFSSATDCQVTLALARIIPEGAKLTLEINWQVITFQNKKEMHKIPLSLFLLKLRKKD 293 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIM 323 N + RLK K+G + T EL T +L+ + + M I +SA+ Sbjct: 294 KELNKIEIIRLKEKLGTKQLPTAELLLKGTPAYLISPVGKGIKYISHMLNITRLYNSALR 353 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 +V G ++S P+ + ++D+ + L R+ + Sbjct: 354 AVFGNKLSKI-------------------PLQVKVLSDMEVTFRGNLILLLRVGYWLSKE 394 Query: 384 KSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 +S + E RI +PI K + K + +E +E GG GY+E + +R+S Sbjct: 395 QSNTATQMEGDLLRISSPILKLYSGKDVVRLCSEGLEYFGGLGYMENSHLPNLFRDSQVL 454 Query: 441 SILLGSGNAMVLD 453 +I G+ N + LD Sbjct: 455 AIWEGTTNVLCLD 467 >gi|325291892|ref|YP_004277756.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325059745|gb|ADY63436.1| probable acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 598 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 96/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ T + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ M+D + ++A++EG + F+ Sbjct: 172 TDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFI 231 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L EDGS NG+ +++K+G NAT + + + G+LLG N + M Sbjct: 232 VPKFLVKEDGSLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360 L + +S ++ A+ YAR R +SG D+ P ++R + Sbjct: 292 MNEARLGVGLQGLSVGEIAYQNAVEYARERIQGRSLSGAKFPDKKADPIIVHPDIRRTLM 351 Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 I A TAL +A+ + K R ++ PI K Sbjct: 352 TIKAYNEAGRAFLLWTALQSDIAHRSTDEKERQTADDLLGLVTPILKGVLTDKGFDHAVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE ++++ R++ I G+ LD++ + Sbjct: 412 AQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 LG + G+ V+ + ++ C+E++ EK++L + + G+ND+ Sbjct: 455 KLGMNGGRAVMALFKEIGDFCEENR-----PDEKLSLYTKG---LKKGLNDL 498 >gi|325283937|ref|YP_004256478.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] gi|324315746|gb|ADY26861.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] Length = 611 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 94/379 (24%), Positives = 161/379 (42%), Gaps = 52/379 (13%) Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAP 190 H + A L +M M P +T ++ AL + +P + + + PK+ S E+ T Sbjct: 111 HTVANAMLEMMNSANVAWAMYPGLTHGAVSALSEVGSPELQQLYLPKLISGEWTGT---- 166 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIM 245 + LTE GTD+ I ++ DG Y ++G K F+S+ D ++ Sbjct: 167 ---------MCLTEPHAGTDLGIIRTKAADNGDGTYSITGTKIFISAGEHDFTDNIIHLV 217 Query: 246 LAQVEGR------VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNT 294 LA++EG + FLVP+ + DG+P NG+ L++K+G NAT L F Sbjct: 218 LARLEGSPEGTKGISLFLVPKFVPNADGTPGERNGVVCGSLEHKMGIHGNATAVLNFDGA 277 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGG 347 G+L+G++N + M L + + + V+ A+ YA+ R V+ Sbjct: 278 KGWLVGEVNRGMNHMFIMMNAARLGTGLQGLGLGEVAYQNAVAYAKDRTQMRAEPRVNPA 337 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRL-----------ANSFDEAKSRSEEAAYARIM 396 D ++ + + + A T L A+ DEAK + E A ++ Sbjct: 338 EQADPIIVHPDVRRMLMTGKAYTEAGRALALWLALALDTEAHHPDEAKQK-EAADTVALL 396 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + + ++ + GG GYI E + + R++ I G+ LD+L Sbjct: 397 TPIAKAFMTDNGFNIAVQSQQVFGGHGYIAEWGMEQFVRDARIGQIYEGTNGIQSLDLLG 456 Query: 457 --LLEKGTNLFEQLFSTLE 473 +L G + L TL+ Sbjct: 457 RKVLMDGGKKLQALAGTLQ 475 >gi|154250918|ref|YP_001411742.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154154868|gb|ABS62085.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 597 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 51/360 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ + E+ T + LTE GT Sbjct: 125 MYPGLSHGAYSALSQHGTDEQKKKYLPKLVTGEWTGT-------------MNLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ + ++ + DG + +SG K F+S+ D ++LA++EG + FLV Sbjct: 172 DLGLLRTKAVPVGDGSFKISGQKIFISAGEHDLADNILHLVLARIEGAPAGVKGISLFLV 231 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L EDGS NG+ L+ K+G NAT L + G+L+G+ + + M Sbjct: 232 PKFLVNEDGSLGNRNGVSCGSLEEKMGIHGNATCVLNYDEAIGWLVGEEHKGLRAMFTMM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILIDQPVMKRAIAD 361 L + +S + A+ YA + R ++G LI P ++R + D Sbjct: 292 NEARLGVGLQGLSQSEAAYQNAVTYALERLQGRSLTGPKAADKAADPLIVHPDIRRMLLD 351 Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + TAL L++ D+ K+R ++ P+ K + +A Sbjct: 352 IKSFNEGARALLVWTALHGDLSHRSDDEKTREFGEDMMSLLTPVLKGYFTDRGFMNAVDA 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 + GG GYIEE + + R++ I G+ LD++ L + G F T++ Sbjct: 412 QQVYGGHGYIEEWGMEQFVRDARIAMIYEGANGVQALDLVGRKLAQNGGRAVFAFFKTID 471 >gi|27376269|ref|NP_767798.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27349409|dbj|BAC46423.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 596 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 91/393 (23%), Positives = 170/393 (43%), Gaps = 68/393 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M +T + AL+ +P K + PK+ + E+ T + LTE GT Sbjct: 126 MYGGLTMGATAALIVHGSPEQKKTYVPKMVAGEWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ + +DG + ++G K F+S+ ++D I +LA++EG V F+V Sbjct: 173 DLGMLRTKAVRQADGSFKITGTKIFISAGEHDLADNIIHLVLARIEGAPAGIKGVSLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ NG+ +++K+G N+T + + + G+L+G+ N + M Sbjct: 233 PKFLVNADGSVGARNGVVCGSIEHKMGIHGNSTCVMNYDSATGWLIGEENKGMQGMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355 L A+ ++ V+ A+ YAR R ++G D+P + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVAYARERIQGRSLTGTKAPDKPADPIIVHPDVRRTLLS 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A TAL +A+ ++AK R + +M P+ K + A +A Sbjct: 353 IRAFNEAARAFVMWTALKSDVAHRSEDAKDRQAADDHMGLMTPVLKGFLTDYGFANAVQA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GYI E+ + + R++ I G+ LD++ L +D Sbjct: 413 QQMYGGHGYIAEQGMEQFVRDARIAMIYEGANGIQALDLVG-------------RKLPRD 459 Query: 476 LGSSGKKVITILRDSISLCKE---DKGLARFLT 505 G+ ++ + ++ KE D+ L F+T Sbjct: 460 ---GGRAIMAFFGEVMAFAKENGGDEALKPFIT 489 >gi|254463326|ref|ZP_05076742.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2083] gi|206679915|gb|EDZ44402.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 593 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 96/376 (25%), Positives = 159/376 (42%), Gaps = 59/376 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE GTD+ + ++ DG Y +SG K F+SS M+D I +LA++EG Sbjct: 161 MNLTEPHCGTDLGLMRTKAAPQDDGSYKISGQKIFISSGEHDMADNIIHLVLAKIEGGPE 220 Query: 252 ---RVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS NG+ ++ K+G N+T + + G+LLGD + Sbjct: 221 GIKGVSLFIVPKFNINEDGSLGARNGVAVGSIEEKMGIHGNSTCVMNYDEATGYLLGDEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---------HVSGG---ILID 351 + M L + ++ + A+ YA+ R GG LI Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLAQADAAYQNAVDYAKDRLQGRAVTGTENPGGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409 P ++R++ D A A A D+A ++ A ++ P+ K + Sbjct: 341 HPDIRRSLMDQKSFTEGARAFLLWGATMIDDAHRSGDKDADGLVSLLTPVIKGFLTDQGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + +A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 401 DMTVKAQQIYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGL-----ARFLTEKIALASSAAALYRAGMND 524 L QD GK V+ + CKE+ G A F+ L +S+ L AGM Sbjct: 448 RKLAQD---GGKHVMAFFDLVKTFCKENAGQDDAYDAEFIE---PLKASSKDLQAAGM-- 499 Query: 525 IADVFLENRFLDNCHS 540 F++N + H+ Sbjct: 500 ---YFMQNGMKNPNHA 512 >gi|254509704|ref|ZP_05121771.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium KLH11] gi|221533415|gb|EEE36403.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium KLH11] Length = 593 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE GTD+ + ++ + DG Y +SG K F+S+ M+D I +LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQKIFISAGDHDMADNIIHLVLAKIPGGPE 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS NG+ +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFIVNEDGSLGERNGVSVGKIEEKMGIHGNSTCVMNYDEATGWLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351 + M L + +S + A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLSQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R + D A A A D+A ++ A I + P+ K + Sbjct: 341 HPDIRRNLMDQKSFTEGARAFILWGATMIDKAHRSDDKDADGLISLLTPVIKGFLTDEGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + +A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499 L QD GK V+ S CKE+ G Sbjct: 448 RKLAQD---GGKHVMAFFEMVKSFCKENGG 474 >gi|109898458|ref|YP_661713.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109700739|gb|ABG40659.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 616 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 53/340 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V +A+++ + + P++ + E+ T + LTE G+ +A I Sbjct: 145 TVAAANVIKNFAEQSIKDKFMPRMLTGEFTGT-------------MALTEPHAGSSLADI 191 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261 T+ + DG Y + G K F+S+ +SD + +LA+++G + F+VP RL Sbjct: 192 TTNAKPADDGTYRIKGSKMFISAGDHELSDNIVHLVLAKIQGAPAGVKGISLFVVPKFRL 251 Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311 E+G P N + L +K+G R + L F + G+L+G+ L + + Sbjct: 252 DENGEPAQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCHGYLVGEAHQGLKYMFLMMNE 311 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364 +I + +A++ SG R SL A + R D+P +KR + Sbjct: 312 ARIGVGFGAAMLGYSGYRYSLGYAKERTQGRVAPNNKPTDKPATIIKHGDVKRMLLAQKS 371 Query: 365 DIAAATALSFRLANSFDE--------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + A +L F + DE AK R+ E ++ P+ K W + P A+ Sbjct: 372 YVEGAMSLCFYASRLVDELHIAETPEAKQRTAE--LLDLLTPVVKAWPSEFGPKANDLAI 429 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +GGSGY E + + +R++ N I G+ LD++ Sbjct: 430 QILGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLMT 469 >gi|254436626|ref|ZP_05050120.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] gi|198252072|gb|EDY76386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] Length = 566 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 37/317 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ S DG Y +SG K ++ Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALRSTAVPNDDGSYAISGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA++ +G G F+VP+ + D G N L L++K+ Sbjct: 197 SWADNDFTENVCHLVLARLPDGVAGTKGISLFMVPKRIPDADGNLGERNDLRVISLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +E++ G+L+G+ + + M L A + + A+ YA Sbjct: 257 GLHGSPTAVMEYAGAKGWLVGEKHAGMAAMFTMMNNARLGVATQGIGVAEAAYQHALAYA 316 Query: 340 --RRRHVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR- 394 R++ +GG + + ++R +A + DI AA A+S A + D A + + A AR Sbjct: 317 MDRKQGKAGGTGTIAEHADVRRMLASMKADIFAARAISLANAVAIDMANATGDGAWTARA 376 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++ PI+K + + + + ++ GG G+IEE A++ R+ +I G+ +D Sbjct: 377 ALLTPISKAFGTDIGVEITSTGIQTHGGMGFIEETGAAQYARDVRVTTIYEGTNGIQAMD 436 Query: 454 VL--NLLEKGTNLFEQL 468 ++ +++ G F L Sbjct: 437 LVARKMMDGGDAAFALL 453 >gi|149184496|ref|ZP_01862814.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21] gi|148831816|gb|EDL50249.1| putative acyl-CoA dehydrogenase protein [Erythrobacter sp. SD-21] Length = 601 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 52/370 (14%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL+ + + PK+ S E+ T + LTE GT Sbjct: 126 MYPGLTNGAISALLAKGSDEQKAMYLPKMVSGEWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ I ++ + + DG Y ++G K F+S+ MS+ I +LA+ G + F+V Sbjct: 173 DLGMIRTKAEPLGDGSYAITGTKIFISAGEHDMSENIIHLVLAKTPGAPDSTKGISLFVV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L EDG+P NG+ ++ K+G N+T L + G+++G+ N + M Sbjct: 233 PKFLVNEDGTPGERNGVMCGSIEEKMGIHGNSTCVLNYDGAKGWMVGEENKGLAAMFIMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGI--------LIDQPVMKRAIAD 361 L + +S V+ A+ YA RR R ++G + P ++R + D Sbjct: 293 NAARLGVGMQGLSQAEVAYQNAVAYALDRRQGRALTGPAEPEAQADPIFVHPDVRRMLMD 352 Query: 362 IALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 A AL+ L + + R+E +M P+ K + V Sbjct: 353 AKAFTEAMRALALWGGLLVDLTHKAQTEEERAEADLLLGLMTPVIKGYGTDKGYEVATNM 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 + GG GYIEE +++ R++ I G+ +D+ L +KG + F + Sbjct: 413 QQVFGGHGYIEEWGMSQFVRDARIAQIYEGTNGVQAMDLCGRKLAQKGGAAVQAFFKHVG 472 Query: 474 QDLGSSGKKV 483 ++ ++GK++ Sbjct: 473 DEI-AAGKEI 481 >gi|119479329|ref|XP_001259693.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181] gi|119407847|gb|EAW17796.1| Acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181] Length = 639 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 119/521 (22%), Positives = 206/521 (39%), Gaps = 87/521 (16%) Query: 35 NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y++D+ L L++ + PS ++ ++ LGE +S +E + A + P + Y Sbjct: 25 NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQPYVKGYNV 84 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+D ++ W L R G+ +D S+ R + Q Sbjct: 85 WGQRYDYDRLITSEGWKQLSRWGARHGVVALGYDPSYGASRR-------------LVQYT 131 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI--------- 198 +L PS L + P D A I S++ + V Sbjct: 132 VNYLYGPSS------GLTSCPVAMTDGAALILSQQLQQHSFPEDHPFRVVFNHLTSRNED 185 Query: 199 ----GLGLTEKRGGTDI---------------AAITSQGQ---KISDGIYCLSGHKWFLS 236 G +TE+ GG+D+ ++ TS + +G Y +SG K+F S Sbjct: 186 FWTSGQWMTERAGGSDVQNTETWATHDPLPASSSTTSNNNPLGTLGEGEYSISGFKFFSS 245 Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN--------GLCYQRLKNKIGNRSNAT 286 + ++ ++LA+ G++ FL P PN G+ RLK K+G + T Sbjct: 246 ATDANVTLLLAKTAPSGKLSTFLAPLRRTITPPNQAPREVTNGVRIHRLKTKLGTKELPT 305 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ELE + L+G + + + + + I S+ R +L+ A ++R R G Sbjct: 306 AELELRDMRAHLVGQRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARSFSRARSTVG 365 Query: 347 GILIDQPVMKRAIADIALDIAAATALSF-------------RLANSFDEAKSRSEEAAYA 393 L P+ R +A++ + AA L F A +E Sbjct: 366 EPLWLIPMHLRLLAEVEVRQRAAMQLGFFTVGVMGVVENPGATAEVPGHVPKGAEATVVF 425 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGN 448 R + ++K KMA I E E +GG GY++E +++R R + NSI G+ N Sbjct: 426 RALTAVSKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTN 485 Query: 449 AMVLDVLNLLEKGTNLFEQLFSTLEQDLGS-SGKKVITILR 488 + +++ L N F + +E+ LG G+K+ LR Sbjct: 486 VLASEMVRFLLARDN-FAVFAAWVERVLGMIRGEKLAQALR 525 >gi|254720095|ref|ZP_05181906.1| hypothetical protein Bru83_11263 [Brucella sp. 83/13] gi|265985101|ref|ZP_06097836.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306839066|ref|ZP_07471886.1| acyl-COA dehydrogenase [Brucella sp. NF 2653] gi|264663693|gb|EEZ33954.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306405889|gb|EFM62148.1| acyl-COA dehydrogenase [Brucella sp. NF 2653] Length = 597 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKETYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|56478462|ref|YP_160051.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56314505|emb|CAI09150.1| probable acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 599 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 66/358 (18%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V A + + + + + W PK+ S E+ T + LTE + G+D+AA Sbjct: 131 NVGQAEALLIAASDELKQTWLPKVVSGEWGST-------------MNLTEPQAGSDLAAT 177 Query: 215 TSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL 262 ++ + DG + L G K F+S ++ + L A V+G + FLVP+ L Sbjct: 178 RTRAEPAPDGSFRLFGQKIFISYGEHELTSNIVHLVLARLPDAPAGVKG-LSLFLVPKFL 236 Query: 263 --EDGSPNGLCYQR---LKNKIGNRSNATVELEFSNT------FGFLLGDLNVSTGPVED 311 DG+P R +++K+G + T + + + G+L+G GP Sbjct: 237 LDADGNPGAKNDVRCIAIEHKLGIHGSPTCTMSYGDAGDAGGAVGWLVG------GPNRG 290 Query: 312 MK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR--------HVSGGILIDQPVMKR 357 ++ + I ++ A V L E A+ YAR R +G ++ P +KR Sbjct: 291 LETMFIMMNEARFGVGVQGAGLGERAYQLALGYARERVQGRDAITGEAGQPILHHPDVKR 350 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAV 411 + + + A AL + A FD A+ + A Y ++ P+ K WC ++ V Sbjct: 351 MLLSMRARVMAMRALLYTAAGWFDFAEHHPDAALAAKCRRYVDLLMPVAKGWCTEVGQQV 410 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFE 466 ++A++ GG G++EE IA+ R++ +I G+ D++ L E G L E Sbjct: 411 CSDAIQVFGGMGFVEETGIAQFARDARIITIYEGTTGIQANDLIGRKILRESGETLRE 468 >gi|126728299|ref|ZP_01744115.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37] gi|126711264|gb|EBA10314.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37] Length = 546 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 35/295 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGR------ 252 + LTE + G+D+ A++++ DG Y ++G K ++S +D + V GR Sbjct: 145 MNLTEPQAGSDVGALSTKAVPNGDGTYAITGQKIYISWGDNDFTGNVCHLVLGRLPDAGP 204 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ + D G+ N L L++K+G + T + + G+L+G N Sbjct: 205 GTKGISLFLVPKFVPDENGEPGARNDLRVVSLEHKMGLHGSPTCVMSYEGATGWLVGAEN 264 Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG---GILIDQPV 354 + M+ + +++A + V + +AE A+ YA R G ++ Sbjct: 265 ------DGMRAMFTMMNNARLGVGVQGIGVAEGAYQHALAYAEERKQGKSETGNILGHAD 318 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVI 412 ++R +A++ D+ AA ++ LA + D A++ ++ AA A ++ PI K + V Sbjct: 319 VRRMLAEMKADVFAARSIGLMLAVALDMARATGDKSWAARAGVLTPIAKAFGTDTGIEVA 378 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 ++ ++ GG GYIEE A++ R+ SI G+ +D++ L++ G +F Sbjct: 379 SKGVQVHGGMGYIEETGAAQYLRDVRVTSIYEGTNGIQAMDLVGRKLMDGGEAVF 433 >gi|71003177|ref|XP_756269.1| hypothetical protein UM00122.1 [Ustilago maydis 521] gi|46096274|gb|EAK81507.1| hypothetical protein UM00122.1 [Ustilago maydis 521] Length = 649 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 48/451 (10%) Query: 82 PQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 P L Y G+R DK+ W L + D + + R +A + ARL+ Sbjct: 76 PTLVQYDAWGQRVDKLVTGEGWKRLKGVAAQDAIVAESYSRPEATSGGGRARLGQHARLF 135 Query: 142 ------LMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQK 193 + A + L S+T ++ + L T + ++ P++ S DP Sbjct: 136 AFTRSVMFAPVSKVVLCPVSMTDGAVRVLELFGTEKQKRENIPRLCS--TDPI------- 186 Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKI-------SDGIYCLSGHKWFLSSPMSDAFIML 246 T+ G +TE+ GG+D++ + + + + + +SG KWF S+ D + L Sbjct: 187 TAWTAGQWMTERPGGSDVSRTETVARPVNAHKKPEAGDQFVISGFKWFSSATDGDIALAL 246 Query: 247 A------QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 A Q+ R + ++ +D G NG+ RLK K+G + T ELE G L Sbjct: 247 ARTNDDLQLGSRGLSLFLIKIRDDKTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGEL 306 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQPVMKR 357 +G++ + + + L SA +V + L A YA+ R + GG L P+ Sbjct: 307 VGEIGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLEKLPLHTD 366 Query: 358 AIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + + + + F L + + ++ + R++ P K + A Sbjct: 367 QLLKVTVTYRVFLQIFFSNVLLMGASESGQASKRDQTRLRLLTPALKAFIATRASESYLT 426 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGT---------- 462 +E GG GY+EE +A R+ I G+ + LDVL +L KG Sbjct: 427 LIESFGGQGYMEEVGMAEMLRDCTVERIWEGTPAILSLDVLRVLVQSKGQALVEFFQDIG 486 Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISL 493 N+ L S L QDL + + ++R + S+ Sbjct: 487 NILASLPSKLSQDLSAEISFLGNVVRRTASI 517 >gi|300310835|ref|YP_003774927.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300073620|gb|ADJ63019.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 594 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 67/387 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ ALMT T + + + S ++ T + LTE + G+ Sbjct: 124 LCPLLTDGTIEALMTAGTQQQKETFIANFISGKWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ DG Y L G K F++ D ++LA+ EG G F+V Sbjct: 171 DLALVRTRAVPEGDGTYKLFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------LIDQPVMKRAI 359 M I++ + + G+ VS +A+ YAR R S + +I QP ++R + Sbjct: 288 YMFIMMNAARFAVGIQGLSVSERAYQKAVAYARDRIQSRDLAGSPGPVAIIHQPDVRRML 347 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIA 413 + I AA ALS+ A + D A +EA A+ + PI K W +M+ V + Sbjct: 348 MSMRAQIEAARALSYVAAATSDAAHFSDDEATRKSNQAFYEYLVPIVKGWITEMSIDVTS 407 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 ++ GG G+IEE A++YR++ I G+ + +L+ + T Sbjct: 408 TGVQVHGGMGFIEETGAAQYYRDARILPIYEGT---TAIQANDLVGRKT----------A 454 Query: 474 QDLGSSGKKVITILRDSISLCKEDKGL 500 +D G+ K ++ +R ++S + D L Sbjct: 455 RDGGAVAKGILAQVRKTVSELQGDAQL 481 >gi|46137383|ref|XP_390383.1| hypothetical protein FG10207.1 [Gibberella zeae PH-1] Length = 638 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 124/505 (24%), Positives = 204/505 (40%), Gaps = 91/505 (18%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG--GERWDKVEFHPAWHALLRRSI 111 V E+ LG+ VLS A N P L G G+ + W L + Sbjct: 43 VEAEVTALGDDVLSDEVFSWITDAERNKPYLKGSGRDVFGQWKGDLVTGEGWRGLQNFGL 102 Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYL---------------MAQLEAGHLMSPSV 156 G + +D + P R A++ +L+ A+L HLMSP + Sbjct: 103 SRGFVAAGYDTEYGPFAR--AYQFLRIQLWTPSCANVGCPSAMQDGAARLLQTHLMSPEL 160 Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA--AI 214 S T RV ++ + SR+ A TS G +TE+ GG+D++ Sbjct: 161 ---SKRLTDTQRRVFENAFQHLTSRD------ASYAWTS---GQWMTERTGGSDVSLTET 208 Query: 215 TSQGQKISD------------GIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCFLVP-- 259 T+ Q ISD G + +SG KWF S+ S ++LA+ +G + F+ P Sbjct: 209 TAIHQPISDLGLASKIEDIPLGPWSISGFKWFSSATDSRMTVLLARTSKGGLSTFIAPMY 268 Query: 260 -----------RLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + E+G NG+ QRLKNK G +S T EL + +L+G Sbjct: 269 KHDPHALTATGQSKENGENLNGVRIQRLKNKSGTQSLPTAELVLEDMRAWLVGQEGHGIQ 328 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-----ILIDQPVMKRAIADI 362 + ++ L + S++ +V + LA A YAR R V G L + + R ++ I Sbjct: 329 EIANVLTLTRVHSSVSAVGYLGRGLAIARAYARVREVGAGRGARMKLTESSLHMRTLSKI 388 Query: 363 ALDIAAATALSFRLANSFDEAK------------------SRSEEAAYARIMAPITKYWC 404 + + LS ++ ++ S+ A R++ +TK + Sbjct: 389 SCEYRGLMLLSMFTSHVLGVSEHGVSSTSSLSPALETLTPSKQHAAPLVRVVTQLTKAYI 448 Query: 405 CKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 CK + ++ ME +GG GY+ EE+ +IAR +R+ I G+ + + D L L+ Sbjct: 449 CKASVQLLFSCMESLGGVGYLANEEQEYLNIARLHRDCAVLPIWEGTTDVLSTDFLRALK 508 Query: 460 K---GTNLFEQLFSTLEQDLGSSGK 481 G + L + + + S GK Sbjct: 509 HTKGGREALDALEDFVRRGITSQGK 533 >gi|126726056|ref|ZP_01741898.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] gi|126705260|gb|EBA04351.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] Length = 571 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 152/315 (48%), Gaps = 55/315 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE + G+D+ A+ S+ DG Y +SG K Sbjct: 148 YLPKLTSGEWTGT-------------MNLTEPQAGSDVGALKSKAVDNGDGTYAISGQKI 194 Query: 234 FLSSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKN 277 +++ DA ++LA++ EG G FLVP+ + D G+P N L L++ Sbjct: 195 YITWGDHDAAENICHLVLARLPEGGDGTKGISLFLVPKFIPDEAGNPGVANSLKVVSLEH 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-- 335 K+G + T +++ G+L+G + G ++ M +++A + V+ V +AEA Sbjct: 255 KMGIHGSPTAVMQYDGATGWLVGQ---AQGGMKAM--FTMMNNARLGVAAQGVGMAEAAF 309 Query: 336 ---IHYARRRH-----VSG-GILIDQPVMKRAIADIALD------IAAATALSFRLANSF 380 + +++ R V G G + D ++R + + D I A+ A++ LA + Sbjct: 310 QHALAFSQDRKQGRTPVEGKGAIFDHADVRRMLMTMRADTFAARAICASNAVAIDLARAT 369 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A ++ A ++ PI+K +C +A V ++ ++ GG G+IEE A++ R++ Sbjct: 370 DSADWQTRAA----LLTPISKAFCTDIANEVASDGLQVFGGMGFIEETGAAQYARDARIL 425 Query: 441 SILLGSGNAMVLDVL 455 I G+ +D++ Sbjct: 426 PIYEGTNGIQAMDLV 440 >gi|83854874|ref|ZP_00948404.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1] gi|83842717|gb|EAP81884.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1] Length = 571 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 51/364 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + DG Y +SG K ++ Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQKVYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + +D ++LA++ G + FLVP+ L EDGS N L L++K+ Sbjct: 197 TWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNEDGSLGNANTLNVVSLEHKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-- 337 G + T +++ G+L+G G + M +++A + V G + +AEA + Sbjct: 257 GIHGSPTCVMQYDKATGWLVGP---EQGGMAAM--FTMMNNARLGVGGQGIGIAEAAYQH 311 Query: 338 ---YARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385 YA R G ++D ++R + + + AA A++ A + D A Sbjct: 312 ALAYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATG 371 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 ++E A A + PI K + AV ++ GG G+IEE A++ R+ +I G Sbjct: 372 QAEWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEG 431 Query: 446 SGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503 + +D V + G +L +E D + + V + D++ E + + Sbjct: 432 TNGIQAMDLVARKMMDGGEAANRLLDEIEAD-AEAARDVFPNMTDALWQASETLREATDW 490 Query: 504 LTEK 507 LTE+ Sbjct: 491 LTEQ 494 >gi|89056385|ref|YP_511836.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1] gi|88865934|gb|ABD56811.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1] Length = 584 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 26/295 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAF--IMLAQVEGR-- 252 + LTE + G+D+ A+T++ + DG Y +SG K ++S M+D ++LA++ G Sbjct: 187 MNLTEPQAGSDVGALTTKAEPQGDGTYAISGQKIYISWGDHDMADNICHLVLARLPGAPK 246 Query: 253 ----VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ + DG+P N L +++KIG + T +++ G+L+G+ N Sbjct: 247 GTKGISLFLVPKKIPDADGNPGVANSLQVVSIEHKIGLHGSPTCVMQYDGARGWLIGEEN 306 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMK 356 + M L A+ +S + +A+ +A R G ++D ++ Sbjct: 307 KGMAAMFTMMNNARLGVAVQGLSVAERAYQQALAFATDRKQGRSLIENGTGTILDHADVR 366 Query: 357 RAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 R + ++ +I + A++ LA S D E ++ A+ A + PI K + + Sbjct: 367 RMLMEMKAEIFSVRAMALDLAVSLDLEKTGDAQAASRAAFLTPIAKVYGTDTGVKLANMG 426 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468 ++ GG G IEE A+ R+ +I G+ +D++ L++ G F L Sbjct: 427 IQIHGGMGVIEETGAAQFVRDVRVTTIYEGTTGIQAMDLVGRKLMDGGAAAFALL 481 >gi|289423230|ref|ZP_06425041.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus anaerobius 653-L] gi|289156330|gb|EFD04984.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus anaerobius 653-L] Length = 377 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 16/263 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM GLTE G+D A+I + +K D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMVTGEKMFAFGLTEPGAGSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + G + + D G+ + + +NK+G T ++ N + +LG Sbjct: 170 TDASAGAKGISTFIVDTKLEGVSFGKAENKMGMIGCPTSDVVLDNVRVSKDDMLG--KEG 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + MK L L A ++ ++ EAI YA+ RH G L + IA++ Sbjct: 228 KGFINAMKTLSVGRLGIACQALGLAEGAMEEAIKYAKARHQFGKSLAKFQNTQFMIAEME 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 IAA L + A D K +EA+ A++ A W VI +A++ GG G Sbjct: 288 TKIAAMRHLVYDAAYKMDLGKKADKEASMAKLFATEEAKW-------VIDKALQIHGGYG 340 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI+E I R YR+ SI G+ Sbjct: 341 YIKEYPIERMYRDIRVTSIYEGT 363 >gi|224368000|ref|YP_002602163.1| Acd2 [Desulfobacterium autotrophicum HRM2] gi|223690716|gb|ACN13999.1| Acd2 [Desulfobacterium autotrophicum HRM2] Length = 603 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 51/298 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ +K DG Y ++G+K F+S +++ I +LA++EG Sbjct: 164 LTEPEAGSDVGALTTTAKKNDDGTYSIAGNKIFISGGDHDLTENIIHPVLARIEGAPAGT 223 Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDL 302 + FLVP ++ +DG+P N + L+ K+G NAT L F N G L+G+ Sbjct: 224 KGISLFLVPKFKINDDGTPGESNDVVCTGLEEKMGIHGNATAALAFGSKGNCIGELIGEE 283 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYARRRHVSGGIL------- 349 N + I ++ A + V GM+ S +++YA+ R V G L Sbjct: 284 NKGM-----RAMFIMMNEARLGV-GMQGFGFATTSYINSVNYAKER-VQGVNLMNMFDAD 336 Query: 350 ------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMA 397 I+ P +KR + + ++ L + FD+AK+ + + ++ Sbjct: 337 PKPVAIINHPDVKRQLLSMKANVDGMRTLLYYTGFLFDKAKTAATPEEKEKWEGLIELLT 396 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K +C + V A+ ++ GG G+I+E + R+ SI G+ +D+L Sbjct: 397 PVVKSYCTDRSFEVCAQGIQIYGGYGFIKEYPQEQLLRDCKITSIYEGTNGIQAMDLL 454 >gi|254703131|ref|ZP_05164959.1| hypothetical protein Bsuib36_04187 [Brucella suis bv. 3 str. 686] gi|261753750|ref|ZP_05997459.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261743503|gb|EEY31429.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 597 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPDTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|146308122|ref|YP_001188587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145576323|gb|ABP85855.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 592 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 46/337 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL + TP + P++ S E+ T + LTE + GT Sbjct: 128 MYPGLTHGAINALTSHGTPEQQAQYLPQLISGEWTGT-------------MCLTEPQCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQ-------VEGRVGCFL 257 D+ I ++ +DG + L+G K +++ D ++LA+ V+G + FL Sbjct: 175 DLGLIRTRAVPQADGSFALTGTKIWITGGEHDLVDNIIHLVLAKLPDAPDSVKG-ISLFL 233 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----K 313 VP+ L DG+ N L++K+G + +AT + F G+L+G+ N + M + Sbjct: 234 VPKFLADGTRNSAFCGGLEHKMGIKGSATCVMNFEGAKGWLIGEPNKGLSCMFTMMNSAR 293 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKRAIADIALD 365 +++ + ++ S +++L A + R ++G D+P ++R + + Sbjct: 294 LMVGMQGLGVAESAYQIALGFARERLQSRSIAGPKAADKPADPILVHPDVRRMLLRQKVM 353 Query: 366 IAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 I AL++ +A+ ++A++R+ +++ P+ K + E ++ + Sbjct: 354 IEGCRALAYFAGLQQDIAHGAEDAEARTRADDLVQLLTPVVKAFLTDEGFTCANEGLQVL 413 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GGSG+ E+ I + R+S I G+ LD++ Sbjct: 414 GGSGFTEDWGIEQLVRDSRITRIYEGTNGIQALDLVG 450 >gi|306846013|ref|ZP_07478580.1| acyl-COA dehydrogenase [Brucella sp. BO1] gi|306273648|gb|EFM55493.1| acyl-COA dehydrogenase [Brucella sp. BO1] Length = 597 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|225629267|ref|ZP_03787300.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo] gi|225615763|gb|EEH12812.1| acyl-COA dehydrogenase [Brucella ceti str. Cudo] Length = 617 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 146 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 192 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 193 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 252 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 253 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 312 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 313 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 372 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 373 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 432 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 433 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 472 >gi|306841672|ref|ZP_07474359.1| acyl-COA dehydrogenase [Brucella sp. BO2] gi|306288202|gb|EFM59586.1| acyl-COA dehydrogenase [Brucella sp. BO2] Length = 597 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|294853431|ref|ZP_06794103.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] gi|294819086|gb|EFG36086.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] Length = 597 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|23500529|ref|NP_699969.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|148557925|ref|YP_001257741.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] gi|161620854|ref|YP_001594740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis ATCC 23365] gi|163844921|ref|YP_001622576.1| hypothetical protein BSUIS_B0787 [Brucella suis ATCC 23445] gi|254700009|ref|ZP_05161837.1| hypothetical protein Bsuib55_03987 [Brucella suis bv. 5 str. 513] gi|254705725|ref|ZP_05167553.1| hypothetical protein BpinM_01630 [Brucella pinnipedialis M163/99/10] gi|254710958|ref|ZP_05172769.1| hypothetical protein BpinB_11992 [Brucella pinnipedialis B2/94] gi|254712570|ref|ZP_05174381.1| hypothetical protein BcetM6_04182 [Brucella ceti M644/93/1] gi|254715642|ref|ZP_05177453.1| hypothetical protein BcetM_04202 [Brucella ceti M13/05/1] gi|256015560|ref|YP_003105569.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] gi|256029340|ref|ZP_05442954.1| hypothetical protein BpinM2_01550 [Brucella pinnipedialis M292/94/1] gi|256059026|ref|ZP_05449236.1| hypothetical protein Bneo5_01540 [Brucella neotomae 5K33] gi|256157532|ref|ZP_05455450.1| hypothetical protein BcetM4_01585 [Brucella ceti M490/95/1] gi|256253493|ref|ZP_05459029.1| hypothetical protein BcetB_04172 [Brucella ceti B1/94] gi|260167572|ref|ZP_05754383.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99] gi|260567940|ref|ZP_05838409.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261217391|ref|ZP_05931672.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261220620|ref|ZP_05934901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|261313146|ref|ZP_05952343.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261318538|ref|ZP_05957735.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261320264|ref|ZP_05959461.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261322972|ref|ZP_05962169.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261750492|ref|ZP_05994201.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261756992|ref|ZP_06000701.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265986339|ref|ZP_06098896.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265996033|ref|ZP_06108590.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|23464162|gb|AAN33974.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|148369210|gb|ABQ62082.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] gi|161337665|gb|ABX63969.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365] gi|163675644|gb|ABY39754.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255998220|gb|ACU49907.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] gi|260154605|gb|EEW89686.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|260919204|gb|EEX85857.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|260922480|gb|EEX89048.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261292954|gb|EEX96450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261297761|gb|EEY01258.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261298952|gb|EEY02449.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261302172|gb|EEY05669.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261736976|gb|EEY24972.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261740245|gb|EEY28171.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|262550330|gb|EEZ06491.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|264658536|gb|EEZ28797.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 597 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|317131264|ref|YP_004090578.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens harbinense YUAN-3] gi|315469243|gb|ADU25847.1| acyl-CoA dehydrogenase domain-containing protein [Ethanoligenens harbinense YUAN-3] Length = 378 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 29/284 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG- 230 + W +Y P + + S A L+E G+D+ I + DG Y L+G Sbjct: 97 EKWGNDALKNKYLPLLASGEKLASFA----LSEPDAGSDLKQIKTAAV-YEDGSYILNGL 151 Query: 231 HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 KW +SD F++ AQV + LV R +P G + +K +G R + EL Sbjct: 152 KKWITFGQISDLFLVFAQVGDKPTALLVDR----NTP-GFSIKPIKGLLGARGSMLAELT 206 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR 342 F L+G + V LD SV+ V LA E+I Y+++R Sbjct: 207 FEQCRVPADNLVGKEGLGLSHVAQY----CLDYGRFSVASGCVGLAQACLDESIGYSKKR 262 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 SG +L P++++ IA++A++I AA L + A D +S A + KY Sbjct: 263 ICSGKLLRKHPLIQKKIAEMAVNIEAARLLCQKAAALKDAGDPQSILATWH------AKY 316 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +C KM V +EA++ G +G E + R+YR++ N I+ GS Sbjct: 317 FCAKMVVQVASEAVQIHGANGCTNEYPVERYYRDAKINEIIEGS 360 >gi|17545192|ref|NP_518594.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427483|emb|CAD14001.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 595 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/391 (23%), Positives = 161/391 (41%), Gaps = 64/391 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T + + + PK+ S E+ T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257 D+ + ++ + ++DG Y ++G K F+S+ +SD I L A +G + F+ Sbjct: 174 DLGILRTRAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKG-ISLFV 232 Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ + D G+P NG+ +++K+G NAT + G+++G+ N + M Sbjct: 233 VPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVM 292 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------V 354 L + + V+ + YA+ R +SG D+P + Sbjct: 293 MNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLL 352 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +RA A+ A AL S + R E A ++ P+ K + A E Sbjct: 353 TQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNE 412 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 M+ GG GYI E + ++ R++ N I G+ LD+L + Sbjct: 413 GMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG-------------RKILG 459 Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLT 505 D+G+ KK I++D + ++ + F+ Sbjct: 460 DMGAKMKKFGKIVQDFVEAEGTNEAMQEFVN 490 >gi|159184345|ref|NP_353529.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|159139661|gb|AAK86314.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 598 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ T + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ M+D + ++A++EG + F+ Sbjct: 172 TDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFI 231 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L EDG+ NG+ +++K+G NAT + + + G+LLG N + M Sbjct: 232 VPKFLVKEDGTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360 L + +S ++ A+ YAR R +SG D+ P ++R + Sbjct: 292 MNEARLGVGLQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLM 351 Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 I A TAL +A+ + K R ++ PI K Sbjct: 352 TIKAYNEAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE ++++ R++ I G+ LD++ + Sbjct: 412 AQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 LG + G+ V+ + ++ C+E++ EK++L + + G+ND+ Sbjct: 455 KLGMNGGRAVMALFKEIGDFCEENRA-----DEKLSLYTKG---LKKGLNDL 498 >gi|119774878|ref|YP_927618.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B] gi|119767378|gb|ABL99948.1| acyl-CoA dehydrogenase family protein [Shewanella amazonensis SB2B] Length = 578 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 41/338 (12%) Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S+T+ + +A+ T + + PK++S E+ A + +TE + G+D+ Sbjct: 130 SLTAGAALAINAHGTEELKSTYLPKLYSGEW-------------AGAMDMTEPQAGSDLR 176 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--VGCFLVPRLLEDG 265 I ++ + DG Y ++G K F++ D ++LA++ G + FLVP++ D Sbjct: 177 HIRTRAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDD 236 Query: 266 S-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 PNG+ +++K+G + +AT + F + G+L+G N + M L Sbjct: 237 QGNLTEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAI 296 Query: 321 AIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVM-----------KRAIADIALDI 366 I + + ++ A YAR R + G P++ R + D + Sbjct: 297 GIQGLGSAQAAVQMASDYARERLQGNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRAL 356 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T LA D+ +++ Y ++ P+ K + + A + GG GYI Sbjct: 357 AVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLDITIMAQQVFGGHGYIR 416 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E I + R++ I G+ +D L G NL Sbjct: 417 ETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 454 >gi|17988840|ref|NP_541473.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|17984662|gb|AAL53737.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] Length = 617 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 146 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 192 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 193 DLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 252 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 253 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 312 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 313 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 372 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 373 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 432 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 433 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 472 >gi|134293268|ref|YP_001117004.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134136425|gb|ABO57539.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 596 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPMLTDGAIEALLTAGSDEQKARYVPKMISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D++ + S+ + DG Y + G K F++ M++ I +LA+ G + F+V Sbjct: 171 DLSMVRSRAEPQQDGSYKVFGTKIFITWGEHDMTENIIHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G + + T L+F + G+L+G+ N +E Sbjct: 231 PKFLVNEDGSLGARNDVQCVSIEHKLGIKGSPTAVLQFGDHGGATGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ +S A +A+ YA+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFAVGLQGVGISEAAYQKAVEYAKERVQSRPVDGSAKEAVTIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ D + IA A +A+ ++A +R+ A + PI K W +++ V Sbjct: 348 LGTMRALTDASRAIAYVAAAHNDIAHQHEDAATRAHHQAIYEFLVPIVKGWSTELSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A+ YR+S +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQFYRDSRILTIYEGT 441 >gi|311103476|ref|YP_003976329.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310758165|gb|ADP13614.1| acyl-CoA dehydrogenase, middle domain protein 1 [Achromobacter xylosoxidans A8] Length = 593 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/383 (24%), Positives = 170/383 (44%), Gaps = 71/383 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +P + P++ S E+ T + LTE G+D+ A+ ++ + DG Y Sbjct: 141 SPALKDQLLPRLISGEWTGT-------------MNLTEPAAGSDLGAVRTRATPLEDGSY 187 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL--EDGSP---NGL 270 +SG K F++ D ++LA+ G G F VP+ L +DGSP N + Sbjct: 188 AISGQKIFITYGDHDLASNIIHLVLARTPDAPAGAKGLSLFAVPKYLIQDDGSPGARNDV 247 Query: 271 CYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 L++K+G ++ T ++F G+L+G+LN M + + ++ A +V Sbjct: 248 HCSALEHKLGIHASPTAVMQFGAGQGATGYLVGELNQGL-----MNMFVMMNEARCAVGN 302 Query: 328 MRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSF 374 +++AE A+ YAR R + ++ P ++R + + I + AL Sbjct: 303 QGLAVAERAFQHAVWYARERSQGKVVGEEGAALPILRHPDVRRLLLSMKSRIESMRALGM 362 Query: 375 RLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L+ D A + RS A ++ P+ K W + A + +A++ GG G+IEE Sbjct: 363 YLSMQRDLAHAGADLEVRSRAQARIDLLIPVMKGWFTETAQRITYDAVQVFGGMGFIEET 422 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQLFSTL--E 473 A++YR++ +I G+ D+L LL++ + L E + + Sbjct: 423 GAAQYYRDARILTIYEGTTAIQANDLLGRKTVRDSGAQATLLLDEISQLAEAMLAGAAPA 482 Query: 474 QDLGSSGKKVITILRDSISLCKE 496 ++ G S ++ T LR++I+ E Sbjct: 483 REFGRSLRQGCTHLRETIAWLLE 505 >gi|329851455|ref|ZP_08266212.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] gi|328840301|gb|EGF89873.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] Length = 596 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 99/434 (22%), Positives = 183/434 (42%), Gaps = 71/434 (16%) Query: 109 RSIHDGLHCSIWDR-SFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165 R + L + W S +P Q H + A +++ + M P +T ++ AL Sbjct: 80 REAYKALSEAGWTALSGDPAYGGQGLPHFVNTAFSEMLSGASSAFGMYPGLTEGAISALT 139 Query: 166 TT-PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223 + KD + PK+ S E+ T + LTE GTD+ + S+ +D Sbjct: 140 AGGTQAQKDVYLPKLISGEWSGT-------------MNLTEPHCGTDLGLLRSKAVPAAD 186 Query: 224 GIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP--- 267 G Y +SG K ++S+ D ++LA++EG + F+VP+ + D G+P Sbjct: 187 GSYRISGQKIWISAGEHDFTSNICHLVLARIEGAPEGVKGISLFMVPKFIPDADGNPGER 246 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 N L L++K+G N+T + + GFLLG P E +KI+ Y+ +A G Sbjct: 247 NSLHCAGLEHKMGIHGNSTCVMVYEEAKGFLLG------APNEGLKIMFYMMNAARYGVG 300 Query: 328 MR------VSLAEAIHYARRR-------------HVSGGILIDQPVMK-----RAIADIA 363 ++ S A +A+ R + IL+ V + RA+ + Sbjct: 301 LQGLAIGHASYVAAAEFAKDRLQGRALTGPKSPEKPADSILVHPDVRRMLLESRALIEGG 360 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AL ++ ++ K R + + + ++ P+ K + + V +AM+ GGSG Sbjct: 361 RAFLTWVALQADFQHAAEDEKDREKASDFMSLLTPVLKAYLTEKGLKVTQDAMQVHGGSG 420 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE-----QDL 476 + E +++ R+ I G+ LD++ L KG + ++ ++ Sbjct: 421 FTEHFPASQYMRDVRITLIYEGTNGVQALDLVGRKLPSKGGRAMQSFLGEIDAYIAAEEA 480 Query: 477 GSSGKKVITILRDS 490 GS+ + I L+++ Sbjct: 481 GSAVPQYIKALKET 494 >gi|154252131|ref|YP_001412955.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156081|gb|ABS63298.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 616 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/381 (23%), Positives = 159/381 (41%), Gaps = 71/381 (18%) Query: 152 MSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+A+ AL T P + + A K+ + E+ T + LTE GT Sbjct: 125 MYPGLTNAAYSALWATGEPWMREHVAKKMIAGEWTGT-------------MCLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR----------VG 254 D+ + ++ + DG Y ++G K F+S M+D I ++A++ G V Sbjct: 172 DLKLMKTKAVEQEDGTYRITGTKIFISGGDHDMTDNIIHMVIAKIPGEDGKLANDLSTVN 231 Query: 255 CFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNV 304 F+VP++L E NG+ ++ K+G + NAT L F + + LG + Sbjct: 232 FFMVPKMLVNKETGEITGRNGVSCGSIEKKMGIKGNATAVLNFDDAVAYRLGGAPKEKKT 291 Query: 305 STGPVEDMK------ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGIL 349 TG V+ K + ++ A M V +++ E + YA R ++G Sbjct: 292 ETGEVKKSKSAGMAGMFGMMNGARMGVGIQGIAIGEVAYQNGVTYANERLAGRSLTGAKN 351 Query: 350 IDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 D P + RA + A +A ++ F L + K R E A A++ Sbjct: 352 PDGPADPIMVFPDVRRLLISSRAFVEGARALAMYVSMLFTLQVFGKDEKEREEAADMAQL 411 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M P+ K + +AM+ GG GY+ + + + R++ N + G+ LD++ Sbjct: 412 MTPVIKAFFTDRGFQAANDAMQVFGGHGYVRDHGMEQFVRDARINQVYEGANGIQALDLV 471 Query: 456 N--LLEKGTNLFEQLFSTLEQ 474 + KG F+ LE+ Sbjct: 472 GRKMTAKGGRATMTFFAKLEE 492 >gi|225686562|ref|YP_002734534.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis ATCC 23457] gi|256043671|ref|ZP_05446596.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|256111292|ref|ZP_05452318.1| acyl-COA dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|256262301|ref|ZP_05464833.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260564861|ref|ZP_05835346.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265990091|ref|ZP_06102648.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265992798|ref|ZP_06105355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|225642667|gb|ACO02580.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC 23457] gi|260152504|gb|EEW87597.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|262763668|gb|EEZ09700.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263000760|gb|EEZ13450.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092027|gb|EEZ16324.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326410948|gb|ADZ68012.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis M28] gi|326554239|gb|ADZ88878.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis M5-90] Length = 597 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAVPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKFILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|224825621|ref|ZP_03698726.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224602542|gb|EEG08720.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 594 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 59/355 (16%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+ TP + K+ S E+ T + LTE + G+ Sbjct: 125 LCPMLTQGALEALLHHGTPEQQNAYLAKLVSGEWTGT-------------MNLTEPQAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------VEGRVGCFL 257 D++A+ S+ D Y + G K F++ D ++LA+ V+G + F+ Sbjct: 172 DLSAVRSRAMP-EDDHYRIFGSKIFITWGEHDVTENIVHLVLARLPDAPAGVKG-ISLFV 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 VP+ L DG+P N + L++K+G + T L F + G+L+G+ N + Sbjct: 230 VPKYLLNADGTPGTRNDVQCVSLEHKLGIHGSPTAVLAFGESAGAIGYLVGEPNRG---L 286 Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR-------HVSGGILIDQPVMKRAI 359 E M ++ + + G+ +S +A YAR R H S G +I P ++R + Sbjct: 287 EYMFTMMNHARLAVGLEGVAISERAYQQARDYARERVQGRALGHESAGPIIRHPDVRRML 346 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIA 413 + A AL++ A D A ++ A AR ++ P+ K WC + A V + Sbjct: 347 MTMKSQAEAMRALAYVTAAYMDLAARHTDPAERARYQSRVELLTPVVKGWCTETAQEVAS 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLF 465 ++ GG G+IEE A+H R++ +I G+ D+L L E+G L Sbjct: 407 LGVQVHGGMGFIEETGAAQHLRDARITTIYEGTTGIQANDLLGRKTLREQGRTLL 461 >gi|254476560|ref|ZP_05089946.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11] gi|214030803|gb|EEB71638.1| acyl-CoA dehydrogenase family protein [Ruegeria sp. R11] Length = 593 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 57/388 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE GTD+ + ++ + DG Y ++G K F+SS M+D I +LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPD 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + +DGS NG+ +++ K+G N+T + + + G+LLG + Sbjct: 221 GIKGVSLFIVPKFIVKDDGSLGDRNGVSVGKIEEKMGIHGNSTCVMNYDSATGYLLGTEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351 + M L + ++ + A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALEYAKDRLQGRDVTGAKNPEGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R + D A A A D+A ++ A I + P+ K + Sbjct: 341 HPDIRRNLMDQKSFAEGARAFILWGAKMLDQAHRSEDKDADGLISLLTPVIKGFLTDQGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + +A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 401 DMTVQAQQVYGGHGYIEEWGMSQYTRDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI--ALASSAAALYRAGMNDIAD 527 L QD GK V+ + CKE+ ++ +++ L +++ L AGM Sbjct: 448 RKLAQD---GGKHVMAFFEMIKNFCKENGDISDAYSKEFIEPLKAASKDLQAAGM----- 499 Query: 528 VFLENRFLDNCHSTHCMLHGRFNAAHII 555 F++N + H+ L G ++ H+ Sbjct: 500 YFMQNGMKNPNHA----LAGSYDFMHMF 523 >gi|325292117|ref|YP_004277981.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325059970|gb|ADY63661.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 594 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 104/439 (23%), Positives = 180/439 (41%), Gaps = 59/439 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LGE V+ QE R A L G G D KV W L RR G + Sbjct: 31 LGEDVVDAILQEAGRFATEQVAPLADIGDRQGARLSDGKVSTPDGWADLYRRWAEAGWNS 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175 F + H + A L + ++P++T ++ AL+ + + + + Sbjct: 91 LTAPEEFGG--QNLPHMLNVAALEMWNSGSMAFALAPTLTMGAVEALVAHGSNDLKRIYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE G+D+ + ++ ++ DG Y + G K F+ Sbjct: 149 PKLVSGEWTGT-------------MNLTEPHAGSDLGVLKTRAERNGDGTYRIFGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DG+P N + L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLPEDDGTPGSRNDVFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + F + G+L+G+ N + M L + V+ + Sbjct: 256 GIHGSPTCTMIFGDGKFGEEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAICEAA 315 Query: 332 LAEAIHYARRR--------HVSG-GILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 +AI YAR R SG +I+ P + R + + A A+SF A++ D Sbjct: 316 TQKAIEYARERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGARAISFNCAHAIDM 375 Query: 383 AKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + R+ A ++ PI K + V + ++ GG G+IEE AR+ R+ Sbjct: 376 AHAAEDVAERAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGGMGFIEETGAARYLRD 435 Query: 437 SPANSILLGSGNAMVLDVL 455 + I G+ +D++ Sbjct: 436 ARIAPIYEGTNGIQAIDLV 454 >gi|238028608|ref|YP_002912839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia glumae BGR1] gi|237877802|gb|ACR30135.1| Acyl-CoA dehydrogenase domain protein [Burkholderia glumae BGR1] Length = 595 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + I DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPIGDGAYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+L+G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R + +I P ++R + A A ++ A Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQ 371 Query: 380 FDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+ S R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454 >gi|71905869|ref|YP_283456.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] gi|71845490|gb|AAZ44986.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] Length = 592 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 31/277 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE G+D+AAI+S+ + + DG Y +SG K F++ D ++LA++ Sbjct: 162 MNLTEPNAGSDLAAISSKAKAVGDGTYLVSGTKIFITWGEHDVAENIIHLVLARLPDAPP 221 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLG 300 + FLVP+ L +DGS N L +++K+G + T + + G+L+G Sbjct: 222 GLKGISLFLVPKFLVNDDGSLGARNDLICASIEHKLGIHGSPTAVMSYGEKEGAIGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-------- 352 + N G + M ++ + V + A+ YAR R V GGI+ D+ Sbjct: 282 EENKGIGYMFTMMNHARVNVGLEGVGIAERAYQHALWYARER-VQGGIIGDKSGEKKPIL 340 Query: 353 --PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAP 409 P ++R + D A L++ A + D+A + A ++ P+ K W + Sbjct: 341 HHPDVRRLLMDCKARTEAMRTLAYYGAANIDKAHAGDAAAQARIDLLTPVIKGWSTEQGV 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A++ GG G++EE A++YR+S +I G+ Sbjct: 401 ELSSTALQVFGGVGFVEETGAAQYYRDSRITTIYEGT 437 >gi|254465622|ref|ZP_05079033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium Y4I] gi|206686530|gb|EDZ47012.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium Y4I] Length = 567 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 36/322 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA++ +G G FLVP+ L D G N L L++K+ Sbjct: 197 SWGDNDFCENICHLVLARLPDGAPGTKGISLFLVPKFLPDADGNPGKANDLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+L+G + + M L V + A+ YA Sbjct: 257 GLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLGVGGQGVGAGEGAYQHALAYA 316 Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--AAYAR 394 R + G++ D ++R + ++ D+ A+ A+ A + D + E+ AA A Sbjct: 317 LERKQGKSASGVIADHADVRRMLMEMKADLFASRAILLACAQAIDMQTATGEKDWAARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI K + V ++ GG G+IEE A++YR+ +I G+ +D+ Sbjct: 377 FLTPIAKAFGTDTGIRVSETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQSMDL 436 Query: 455 L--NLLEKGTNLFEQLFSTLEQ 474 + +++ G F + EQ Sbjct: 437 VARKMMDGGETAFALIDEIEEQ 458 >gi|299140247|ref|ZP_07033413.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8] gi|298597786|gb|EFI53958.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8] Length = 383 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 41/288 (14%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K W PK+ S+ L+E G+D A+ + + DG Y L+G Sbjct: 109 KKSWLPKL--------------AESLTGAYALSEAVSGSDAFALQCRAARQEDGDYLLNG 154 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K W ++ + F++ A ++ G CFLV E G+P G R ++K+G R++ Sbjct: 155 SKLWITNAVEAGLFLVFATLDATAGYKGITCFLV----EKGTP-GFTLGRKEDKLGIRAS 209 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHY 338 +T EL FSN + NV P + KI I L+ + + V LA A Y Sbjct: 210 STCELLFSNC---RVPAANVLGEPGKGYKIAIETLNEGRIGIGAQLVGLASGAWRHAARY 266 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 AR R G L + M+ +A +A+D+ AA + + A D +EAA A++ A Sbjct: 267 ARERKQFGKPLAEFQAMQFQLARMAMDVEAARLMVYNAARLKDSGVEYLKEAAMAKLFA- 325 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++A + A+E GG+G+++E + + YR++ I G+ Sbjct: 326 ------SEVAERTASLAVEVFGGAGFVKEYPVEKLYRDAKIGKIYEGT 367 >gi|289572449|ref|ZP_06452676.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis K85] gi|289536880|gb|EFD41458.1| acyl-CoA dehydrogenase fadE35 [Mycobacterium tuberculosis K85] Length = 370 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 8/115 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE+ GG+D+ A+ + + D ++ L+G KWF S+ +AF++LA+ EG V Sbjct: 194 LTERAGGSDLGALETTATRSGD-VWLLNGFKWFASNCAGEAFVVLAKPEGAPDSTRGVAT 252 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-GDLNVSTGPV 309 FLV R DGS NG+ +RLK+K+G RS A+ E+EF + FLL G+ + GPV Sbjct: 253 FLVLRTRRDGSRNGVRIRRLKDKLGTRSVASGEIEFVDAEAFLLSGEPSADAGPV 307 >gi|320333832|ref|YP_004170543.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] gi|319755121|gb|ADV66878.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] Length = 599 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 51/405 (12%) Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAP 190 H + A + +M M P ++ + AL + + + + PK+ + E+ T Sbjct: 111 HLVGNALVEMMNSANVAWSMYPGLSHGAYSALAAVGSDDLKATYLPKLVNGEWTGT---- 166 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--M 245 + LTE GTD+ I ++ + DG Y ++G K F+S+ M+D + + Sbjct: 167 ---------MCLTEPHAGTDLGIIRTRARDNGDGTYAITGTKIFISAGEHDMADNILHLV 217 Query: 246 LAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 LA++EG + FLVP+ L + G N + +++K+G NAT L F + Sbjct: 218 LARLEGSPEGTKGISLFLVPKYLVNADGTLGERNTVVCGSIEHKMGIHGNATAVLNFDDA 277 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------H 343 G+L+G+LN + M L + + + V+ A+ YA+ R Sbjct: 278 KGYLVGELNKGMNHMFIMMNAARLGTGLQGLGIGEVAYQNAVAYAKDRLQMRAPQRVRPD 337 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMA 397 + +I P ++R + A AL+ LA S D + R E ++ Sbjct: 338 EAADPIIVHPDVRRMLLTAKAYTEAGRALAMWLALSLDVEHHHPDDAKRKEAGDLVALLT 397 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN- 456 PI K + A + GG GYI+E + + R++ I G+ LD++ Sbjct: 398 PIAKAFMTDNGFQSAVLAQQVFGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLIGR 457 Query: 457 -LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKEDKG 499 +L G ++L LE L + G + + D++S + G Sbjct: 458 KVLMDGGRKLQKLAGMLETFLEENEGNEDLAPYLDTLSRAAQQVG 502 >gi|294675962|ref|YP_003576577.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294474782|gb|ADE84170.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB 1003] Length = 560 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 34/323 (10%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T + AL + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LNPLLTQGQIEALEHHASEEIKALYIPKLISGEWSGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ A+ S+ + + DG Y ++G K F+S SD ++LA++ + F+V Sbjct: 171 DVGALRSRAEPLGDGTYAITGQKIFISWGDSDVTENICHLVLARLPDASPGTKGISLFMV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G N L L++K+G + T + F G+++G+ + M Sbjct: 231 PKYIPDAAGKPGVANTLGVVSLEHKMGLHGSPTCVMSFEAAKGWMVGEPGKGMAAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L + + + +A+ YA+ R V +I ++R +A++ +I AA +++ Sbjct: 291 NNARLAVGVQGIGVAEAAFQQALAYAQER-VQFSQIIQHADVRRMLAEMRAEIFAARSIA 349 Query: 374 FRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A + D ++ E+ AR ++ PI K + V + ++ GG G+IE+ A Sbjct: 350 LACAVALDLGRATGEDHWLARAALLTPIAKAYGTDTGIWVAEQGVQVHGGMGFIEQTGAA 409 Query: 432 RHYRESPANSILLGSGNAMVLDV 454 ++ R+ +I G+ +D+ Sbjct: 410 QYCRDVRVTAIYEGTNGIQAMDL 432 >gi|83941397|ref|ZP_00953859.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36] gi|83847217|gb|EAP85092.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36] Length = 571 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 51/364 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + DG Y +SG K ++ Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALATKAEDNGDGTYAISGQKVYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + +D ++LA++ G + FLVP+ L +DGS N L L++K+ Sbjct: 197 TWGDNDFGGNICHLVLARLPGAPAGTKGISLFLVPKYLPNDDGSLGNANSLKVVSLEHKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-- 337 G + T +++ G+L+G G + M +++A + V G + +AEA + Sbjct: 257 GIHGSPTCVMQYDKATGWLVGP---EQGGMAAM--FTMMNNARLGVGGQGIGIAEAAYQH 311 Query: 338 ---YARRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385 YA R G ++D ++R + + + AA A++ A + D A Sbjct: 312 ALAYALDRKQGKTSRPDGTGTIVDHADVRRMLMTMKAETFAARAIALCCAKAIDMTNATG 371 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 ++E A A + PI K + AV ++ GG G+IEE A++ R+ +I G Sbjct: 372 QAEWKARAAFLTPIAKAFGTDTGMAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEG 431 Query: 446 SGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARF 503 + +D V + G +L +E D + + V + D++ E + + Sbjct: 432 TNGIQAMDLVARKMMDGGEAANRLLDEIEAD-AEAARDVFPNMTDALWQASETLREATDW 490 Query: 504 LTEK 507 LTE+ Sbjct: 491 LTEQ 494 >gi|260461928|ref|ZP_05810173.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032175|gb|EEW33441.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 596 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 75/412 (18%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++T T W P++ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKAKWLPRMVEGAWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ MSD + +LA++EG + F+ Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHDMSDNIVHLVLARIEGAPEGVKGISLFI 231 Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+L D G+P N L ++ K+G N+T + + G LLG+ N + M Sbjct: 232 VPKLKLDASGNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEANGGLKAMFTM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM---------- 355 L + +S ++ A+ YA+ R +SG D+ P++ Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVAYAKDRLQGRSLSGPKAPDKKADPIIVHPDIRRSLM 351 Query: 356 -KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 RA + +A TA+ +A+ + K R Y +M P+ K Sbjct: 352 TMRAFNEAGRALALWTAIKSDVAHRSGDDKDRQAADDYTGLMTPVVKGVLTDKGFDHTVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE +++ R++ I G+ LD++ + Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 LG + G+ V ++ C+E++ EK+A + A + G+ND+ Sbjct: 455 KLGLNGGRAVQAFFKEVGEFCEENRA-----DEKMAPFTKA---LKKGLNDL 498 >gi|312797296|ref|YP_004030218.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454] gi|312169071|emb|CBW76074.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI 454] Length = 595 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 54/348 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ S ++ T + LTE GTD+ + ++ + DG Y Sbjct: 144 TPELQQRYLPKLVSGQWTGT-------------MCLTEPHCGTDLGILRTRAEPNGDGSY 190 Query: 227 CLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNG 269 ++G K F+SS ++D + L A +G + F+VP+ + D G NG Sbjct: 191 SITGTKIFISSGEHDLADNIVHLVLARLPDAPAGTKG-ISLFIVPKFIPDDNGEPGQRNG 249 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + +++K+G NAT + + G+L+G+ N + M L + + Sbjct: 250 VKCGSIEHKMGIHGNATCVINLDDARGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTE 309 Query: 330 VSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLA 377 V+ ++ YAR+R +SG +I P ++R + + A A ++ A Sbjct: 310 VAYQNSLAYARQRLQMRSLSGPKAPDKAADPIIVHPDVRRMLLTQKAYVEAGRAFTYWAA 369 Query: 378 NSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 D+ S +EA ++ P+ K + A AM+ +GG GYI E I Sbjct: 370 LQIDKELSHEDEAVRRDAADLVALLTPVIKAFLTDNAFEATNNAMQVLGGHGYIAEWGIE 429 Query: 432 RHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDL 476 ++ R++ N I G+ LD+L L + G L + F L QD Sbjct: 430 QYVRDARINMIYEGTNTIQSLDLLGRKVLGDMGAKL--KKFGKLVQDF 475 >gi|259415225|ref|ZP_05739147.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] gi|259349135|gb|EEW60889.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] Length = 570 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 39/325 (12%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y +SG K F+ Sbjct: 150 PKLISGEWAGT-------------MNLTEPQAGSDVGALSSKAEDNGDGTYAVSGQKIFI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKI 279 S +D ++LA+ V G G FLVP+ L E+G+P N L L++K+ Sbjct: 197 SWGDNDFTENVCHLVLARLPDGVPGTKGISLFLVPKYLPDENGNPGKANSLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+L+G + + M L V + A+ YA Sbjct: 257 GLHGSPTCVMQYDGATGWLVGKEHGGMAAMFTMMNNARLGVGGQGVGAAEGAYQHALSYA 316 Query: 340 RRRH-----VSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEA 390 R V G G ++D ++R + ++ D+ A+ A+ A + D A +E Sbjct: 317 LDRKQGKTPVEGGTGTIVDHADVRRMLMEMKADVYASRAIMLACAGAIDMGTATGDAEWK 376 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + PI K + + V + ++ GG G+IEE A+ YR+ +I G+ Sbjct: 377 TRAAFLTPIAKAFGTETGIRVSEQGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQ 436 Query: 451 VLD-VLNLLEKGTNLFEQLFSTLEQ 474 +D V + G + +L +E+ Sbjct: 437 AMDLVARKMMDGGEMAHRLIDEIEE 461 >gi|62317369|ref|YP_223222.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269345|ref|YP_418636.1| sugar transporter family protein [Brucella melitensis biovar Abortus 2308] gi|189022621|ref|YP_001932362.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19] gi|237816921|ref|ZP_04595913.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308 A] gi|254690868|ref|ZP_05154122.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 6 str. 870] gi|254695821|ref|ZP_05157649.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 3 str. Tulya] gi|254698649|ref|ZP_05160477.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732096|ref|ZP_05190674.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 4 str. 292] gi|256256053|ref|ZP_05461589.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 9 str. C68] gi|260544605|ref|ZP_05820426.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260756450|ref|ZP_05868798.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260759882|ref|ZP_05872230.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260763120|ref|ZP_05875452.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882272|ref|ZP_05893886.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261216241|ref|ZP_05930522.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297249407|ref|ZP_06933108.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|62197562|gb|AAX75861.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939619|emb|CAJ12608.1| Sugar transporter superfamily:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain [Brucella melitensis biovar Abortus 2308] gi|189021195|gb|ACD73916.1| acyl-CoA dehydrogenase family protein [Brucella abortus S19] gi|237787734|gb|EEP61950.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308 A] gi|260097876|gb|EEW81750.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260670200|gb|EEX57140.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260673541|gb|EEX60362.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676558|gb|EEX63379.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260871800|gb|EEX78869.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260917848|gb|EEX84709.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297173276|gb|EFH32640.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 597 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + +DG Y +SG K F+S+ MS+ I +LA++EG + F+V Sbjct: 173 DLGLLRTSAAPQADGTYKISGQKIFISAGEHDMSENIIHLVLARIEGAPEGVKGISLFIV 232 Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L E+G+P NG+ ++ K+G NAT + + G+L+G+ N + M Sbjct: 233 PKSILDENGNPGTRNGVSCGSIEEKMGIHGNATCVMNYDEATGYLIGEANKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L A+ +S + A+ YAR R +SG + +I P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAVAPEKKADPIIVHPDIRRNLMN 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL +A D A +EA ++ P+ K A Sbjct: 353 IRAFNEAGRALILWIALHSDIAHRSGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE+ ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEQGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|126740734|ref|ZP_01756420.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6] gi|126718249|gb|EBA14965.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6] Length = 593 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 100/417 (23%), Positives = 178/417 (42%), Gaps = 70/417 (16%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M +T + A++ T + PK+ S E+ T + LTE G Sbjct: 123 VMYQGLTHGAAAAILAHGTDEQKDSYLPKMISCEWTGT-------------MNLTEPHCG 169 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ + DG + +SG K F+S+ MSD I +LA++ G V F+ Sbjct: 170 TDLGLMRTKAEPQDDGSFKISGQKIFISAGDHDMSDNVIHLVLAKIPGGPEGIKGVSLFI 229 Query: 258 VPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L DG+P NG+ ++ K+G N+T + + G+LLG + + M Sbjct: 230 VPKFKLKADGTPGERNGVAVGNIEKKMGIHGNSTCVMNYDEATGYLLGSEHKGMRAMFTM 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LIDQPVMKRAIA 360 L + VS + A+ YA+ R V+G LI P ++R++ Sbjct: 290 MNEARLGVGMQGVSQAEAAYQNAVEYAKDRLQGRDVTGAKNPEGPADPLIVHPDIRRSLM 349 Query: 361 DIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMEC 418 D A + D+A + S++A ++ P+ K + + +A + Sbjct: 350 DQKSFAEGGRAFLLWGSTMIDQAHRDESKDADGLISLLTPVIKGFLSDEGYDMTVKAQQV 409 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 GG GYIEE ++++ R++ I G+ LD++ + LG+ Sbjct: 410 FGGHGYIEEHGMSQYTRDARIAQIYEGANGVQALDLVG-----------------RKLGA 452 Query: 479 SGKKVITILRDSI-SLCKEDKGLAR-FLTEKIA-LASSAAALYRAGMNDIADVFLEN 532 G K + D I + CK++ L+ + + IA L +++ L AGM F++N Sbjct: 453 DGGKHVMAFFDLIKNFCKDNAELSEDYARDFIAPLKAASKDLQAAGM-----YFMQN 504 >gi|254511130|ref|ZP_05123197.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium KLH11] gi|221534841|gb|EEE37829.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium KLH11] Length = 567 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 34/301 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ + E+ T + LTE + G+D+ A+T++ + SDG Y ++G K ++ Sbjct: 150 PKMMAGEWSGT-------------MNLTEPQAGSDVGALTAKAEDNSDGTYSVTGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKI 279 S +D ++LA+ V G G FLVP+ + E+G+P N L L++K+ Sbjct: 197 SWGDNDFCENVCHLVLARLPDGVPGTKGISLFLVPKHIPDENGNPGVANDLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+L+G + + M L V + A+ YA Sbjct: 257 GLHGSPTCVMQYDGARGWLVGKEHGGMAAMFTMMNNARLGVGGEGVGVAEGAYQHALAYA 316 Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R G +ID ++R + + D+ AA A+ A + D +A ++ AA A Sbjct: 317 LERKQGKTPSGTIIDHADVRRMLMSMRADVFAARAIMLANAAAIDMAQATGDADWAARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ PI K + + V ++ GG G+IEE A++YR+ +I G+ +D+ Sbjct: 377 LLTPICKAFGTETGMRVAETGVQVHGGMGFIEETGAAQYYRDVRVTAIYEGTNGIQAMDL 436 Query: 455 L 455 + Sbjct: 437 V 437 >gi|163732339|ref|ZP_02139785.1| putative acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och 149] gi|161394637|gb|EDQ18960.1| putative acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och 149] Length = 564 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 28/279 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE + G+D+ A++S+ Q DG Y ++G K ++S D ++LA++ Sbjct: 161 MNLTEPQAGSDVGALSSKAQPNGDGTYAVTGQKIYISWGDHDVADNICHLVLARLPNAPA 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ + + G+ N + L++K+G + T +++ G+L+G+ Sbjct: 221 GTKGISLFLVPKFIPNADGTLGAQNTVKVVSLEHKLGLHGSPTAVMQYDAATGWLIGE-- 278 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 G + M +++A + V G +AE A+ YAR R +++ ++R Sbjct: 279 -KEGGMAAM--FTMMNNARLGVGGQGTGVAEAAYQQALSYARERKQGKSAIVNHADVRRM 335 Query: 359 IADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + + DI AA + A + D A ++ A A ++ PI K + AV + Sbjct: 336 LGTMKADIYAARVIGLTCAVAIDMAHATGSADWQARAALLTPIAKAFGSDTGIAVADAGI 395 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG G++EE A+ R+ +I G+ +D++ Sbjct: 396 QVHGGMGFVEETGAAQFSRDVRVTAIYEGTNGIQAMDLV 434 >gi|312376076|gb|EFR23271.1| hypothetical protein AND_13184 [Anopheles darlingi] Length = 404 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 27/276 (9%) Query: 184 DPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241 D N+ + S IG L+E G+D+AA+T++ + SDG + L+G K W S + Sbjct: 124 DQRNRFFSKYPSDTIGAFALSEAGAGSDVAAMTTRAAQSSDGSWLLNGRKAWVTSGVEAV 183 Query: 242 AFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 A I+ ++ +G FLV E+ GL R ++K+G R +T +L N Sbjct: 184 AGIVFGTIDASLGYKGISAFLVD--FEEAKAKGLSLGRPEDKLGIRGTSTCDLVLENVSI 241 Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 G + G + ++ ++ +I I A ++ + SL E++ YA++R GG L Sbjct: 242 PAENVLGPVGGGMRIAMEQLDRARIGI----ASQAIGIAQASLEESVAYAKQRTAFGGTL 297 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 ID P ++ IA+I + I A L + A D + ++ + A+ +A T + Sbjct: 298 IDLPAVRTRIAEIGMRIETARLLVRKAAGEVDRGQRATKACSMAKWVAGETATFAAH--- 354 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + +GG GYI+ R YR++ I G Sbjct: 355 ----GCQQIMGGMGYIKNLPAERFYRDARITEIYGG 386 >gi|255264517|ref|ZP_05343859.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62] gi|255106852|gb|EET49526.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62] Length = 567 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 39/365 (10%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T + AL + + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LNPLMTQGQIEALEHHASDAIKELYLPKLISGEWCGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VEGRVGC--FLV 258 D+ A+ S+ + DG + +SG K ++S +D ++LA+ V+G G F+V Sbjct: 171 DVGALRSKAEPNGDGTFKISGQKIYISWADNDFTENVCHLVLARLPDAVDGVKGISLFMV 230 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P N L L++K+G + T +E+ N G+L+G+ + + M Sbjct: 231 PKRIPDENGAPGVANSLRVVSLEHKMGLHGSPTAVMEYDNAVGWLIGEEHAGLAAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSG-GILIDQPVMKRAIADIALDIAAA 369 L + V + A+ YA R SG G +I+ ++R +A + DI AA Sbjct: 291 NNARLGVGVQGVGVAEGAYQHAVTYAMDRKQGKASGAGTIIEHADVRRMLASMKTDIFAA 350 Query: 370 --TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ALS +A ++A E A + PI K + ++ V + ++ GG G+IEE Sbjct: 351 RGIALSCAVAIDMEQATGDVEWRDRAAFLTPIAKAFGTEVGMDVSHQGIQVHGGMGFIEE 410 Query: 428 RSIARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITI 486 A++ R+ +I G+ +D V + G +L +EQ + K + Sbjct: 411 TGAAQYSRDVRVTAIYEGTNGIQAMDLVARKMMDGGEAAMRLLDEIEQ-AAETAKATFPV 469 Query: 487 LRDSI 491 L + + Sbjct: 470 LAEQV 474 >gi|53724999|ref|YP_102032.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei ATCC 23344] gi|67642503|ref|ZP_00441259.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8 horse 4] gi|121600694|ref|YP_994044.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei SAVP1] gi|124385804|ref|YP_001028292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10229] gi|126449791|ref|YP_001081936.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia mallei NCTC 10247] gi|251767556|ref|ZP_02267698.2| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] gi|254177110|ref|ZP_04883767.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|254203718|ref|ZP_04910078.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|254208693|ref|ZP_04915041.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] gi|52428422|gb|AAU49015.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 23344] gi|121229504|gb|ABM52022.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei SAVP1] gi|124293824|gb|ABN03093.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10229] gi|126242661|gb|ABO05754.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei NCTC 10247] gi|147745230|gb|EDK52310.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei FMH] gi|147750569|gb|EDK57638.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei JHU] gi|160698151|gb|EDP88121.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei ATCC 10399] gi|238523668|gb|EEP87105.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei GB8 horse 4] gi|243062317|gb|EES44503.1| acyl-CoA dehydrogenase domain protein [Burkholderia mallei PRL-20] Length = 595 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 57/328 (17%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDLSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+L+G+ N + + +++A + V + Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLN-----AMFVMMNAARLGVGMQGLG 306 Query: 332 LAEAIH-----YARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSF 374 L EA + YA+ R ++G D+P ++R + A A ++ Sbjct: 307 LTEAAYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTY 366 Query: 375 RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A D+A S ++EA ++ PI K + A AM+ GG G+I E Sbjct: 367 WSALQIDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEW 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456 + ++ R++ N I G+ + LD+L Sbjct: 427 GMEQYVRDARINMIYEGTNSVQALDLLG 454 >gi|260433041|ref|ZP_05787012.1| acyl-CoA dehydrogenase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416869|gb|EEX10128.1| acyl-CoA dehydrogenase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 605 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 90/368 (24%), Positives = 153/368 (41%), Gaps = 59/368 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASTILAHGTDEQKNTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264 + DG Y ++G K F+SS M+D I +LA++ G V F+VP+ L ED Sbjct: 179 AEPQGDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPEGIKGVSLFIVPKFLVNED 238 Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 GS NG+ +++ K+G N+T + + G+LLG + + M + Sbjct: 239 GSLGERNGVSVGKIEEKMGIHGNSTCVMNYDGAVGYLLGQEHKGMRAMFTMMNEARVGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369 + ++ + A+ YA+ R V+G LI P ++R++ D + A Sbjct: 299 MQGLAQAEAAYQNALEYAKDRLQGRDVTGPKNPDGPADPLIVHPDIRRSLMDQKSFVEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D+A ++ A I M P+ K + + +A + GG GYIEE Sbjct: 359 RAFILWGATLIDKAHRAGDKDADGLISLMTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 ++++ R++ I G+ LD++ L QD GK V+ Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462 Query: 488 RDSISLCK 495 + CK Sbjct: 463 DMVKTFCK 470 >gi|254460812|ref|ZP_05074228.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2083] gi|206677401|gb|EDZ41888.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 573 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 51/331 (15%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG + ++G K ++ Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSKAEPNGDGSFSVTGQKIYI 196 Query: 236 SSPMSDA-----FIMLAQV-EGRVGC-----FLVPRLLED--GSP---NGLCYQRLKNKI 279 S D ++LA++ +G G FLVP+ L D G+P N L L++K+ Sbjct: 197 SWGDHDVAENVCHLVLARLPDGVAGTKGISLFLVPKYLPDDAGNPGVANTLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334 G + T ++F G+L+G G + M +++A + V G + AE Sbjct: 257 GLHGSPTAVMQFDGAKGWLVGP---EAGGMRAM--FTMMNNARLGVGGQGIGAAEGALQK 311 Query: 335 AIHYARRRHVS-------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKS 385 A+ YA R G ++D ++R +A + D+ AA A++ A + D A Sbjct: 312 AMIYACERKQGRSPIENGTGTIMDHADVRRMLAVMKADVFAARAIALMCAAAIDMQSATG 371 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 S A A + PI K + + V ++ GG G+IEE A+ YR+ +I G Sbjct: 372 SSGWGAKAAFLTPIAKAFGTETGMRVSEMGVQVHGGMGFIEETGAAQFYRDVRVTAIYEG 431 Query: 446 SGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474 + +D++ L++ G F L +EQ Sbjct: 432 TNGIQAMDLVARKLMDGGDAAF-ALLDEVEQ 461 >gi|126459925|ref|YP_001056203.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249646|gb|ABO08737.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 540 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 18/266 (6%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ-------VEGRVG 254 TE + G+D+ + + + + + L G K+F S+ ++DA I+ A+ +G V Sbjct: 161 TEVQAGSDLGSTEAVAYQEGERRWRLRGIKYFTSNVGLADAAIITAKPHPPRPGAKG-VA 219 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F P DG PN RLK+K+G + T E+E +T LLG V TG ++I Sbjct: 220 AFFAPAYRPDGEPNWRIL-RLKDKLGTVTVPTGEVELVDTVAHLLG--TVDTGIYIALEI 276 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L +D++ + R +L EA Y + R G L++ P+ R + ++ + A L Sbjct: 277 LTIARIDNSTAGLGLARKALWEAYLYGQERRAFGKRLVEHPLYIRDLVEMEAKLEATLLL 336 Query: 373 SFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + A F +A + YAR++ I K ++ V +ME +GG G++EE Sbjct: 337 TLKAAKLFSDASRERPPYTPSYHYARLLTHIVKNMAAWVSIDVTRYSMELLGGIGFLEEF 396 Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454 +A+ +R++ SI G+ N LD+ Sbjct: 397 PLAKLHRDALVTSIWEGTSNIQSLDM 422 >gi|84500240|ref|ZP_00998506.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis HTCC2597] gi|84392174|gb|EAQ04442.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis HTCC2597] Length = 575 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 54/380 (14%) Query: 152 MSPSVTSASMVALMT-TPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T + AL P K+ + P++ S E+ T + LTE + G+ Sbjct: 124 LNPLLTQGQIEALQHHAPDWMKELYLPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258 D+ A+T++ DG Y ++G K ++S D ++LA++ E G F+V Sbjct: 171 DVGALTTRAVAQDDGTYAVTGQKIYISWGDHDFGGNVCHLVLARLPEAPAGTRGISLFMV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G PN L L++K+G + T ++F G+L+G+ N + M Sbjct: 231 PKYIPDADGNLGDPNSLRVVSLEHKMGLHGSPTCVMQFDGATGWLVGEENKGMAAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----------HVSGGILIDQPVMKRAIADIA 363 L + + +L AI YA R G ++D ++R IA + Sbjct: 291 NNARLGVGMQGIGIAEGALQHAIVYALERKQGRTPLEGAEGGTGTILDHADVRRMIATMR 350 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGG 421 D AA +++ + D A + + A AR + PI K + V ++ GG Sbjct: 351 ADTFAARSIALACGVAIDMAAATGDAAWKARAAFLTPIAKGFGTDTGMRVSEMGVQVHGG 410 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG---TNLFEQLFSTLEQ-- 474 GY+EE A++ R+ +I G+ +D++ +++ G L +++ +T E+ Sbjct: 411 MGYVEETGAAQYSRDVRVTAIYEGTNGIQAMDMVARKMMDGGDAANALIDEISATAEKAR 470 Query: 475 ----DLGSSGKKVITILRDS 490 +LG S + LR++ Sbjct: 471 ADLPELGESLWEAAETLREA 490 >gi|126733241|ref|ZP_01748988.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2] gi|126716107|gb|EBA12971.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. CCS2] Length = 591 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 100/420 (23%), Positives = 172/420 (40%), Gaps = 70/420 (16%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + + PK+ S E+ T + LTE GTD+ + ++ DG Y +SG Sbjct: 146 QKYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPNGDGSYKISGQ 192 Query: 232 KWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRL 275 K F+S+ M+D I +LA+++G V F+VP+ + +DGS NG+ ++ Sbjct: 193 KIFISAGEHDMADNIIHLVLAKIQGGPEGIKGVSLFIVPKFMVNDDGSLGQRNGVACGKI 252 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 + K+G N+T + + GFL+G+ + + M L + + + A Sbjct: 253 EEKMGIHGNSTCVMNYDEATGFLVGEEHKGMRAMFTMMNEARLGVGLQGYAQAESAYQNA 312 Query: 336 IHYA----RRRHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 + YA + R V+G LI P ++R + D + A A +F A D A Sbjct: 313 VAYANDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFVEGARAFTFWGAYLIDRA 372 Query: 384 KSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A I M P+ K + A + GG GYIEE ++++ R++ Sbjct: 373 HKNEDADADGLISLMTPVIKGFLTDKGFEYATAAQQVYGGHGYIEEWGMSQYARDARIAM 432 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501 I G+ LD++ L QD GK V+ + KE++G Sbjct: 433 IYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMIKTFIKENEGNE 476 Query: 502 RFLTEKIA-LASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560 E + L +++ L AGM F+ N + L G ++ H++ + L Sbjct: 477 ALNKEFLTPLKAASKDLQAAGM----------YFMQNATKPNNALSGSYDFMHMMGHVCL 526 >gi|149927086|ref|ZP_01915344.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter sp. MED105] gi|149824307|gb|EDM83527.1| putative acyl-coa dehydrogenase oxidoreductase protein [Limnobacter sp. MED105] Length = 490 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 64/341 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+ + ++ + + PK+ S E+ T + LTE + G+ Sbjct: 13 LCPLLTDGAIEALLVAGSQQLKETYIPKMISGEWTGT-------------MNLTEPQAGS 59 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ DG Y +SG K +++ D ++LA+ EG G F+V Sbjct: 60 DLALVRSKAVPQGDGTYRISGQKIYITYGEHDMAGNIVHLVLARTPDAPEGVKGISLFVV 119 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT--------FGFLLGDLNVS 305 P+ L EDGS N + +++K+G +++ T L + + G+L+G+ N Sbjct: 120 PKFLVNEDGSLGKRNDVYCASIEHKLGIKASPTAVLLYGDNKGEVGQGAIGYLVGEENKG 179 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA----RRRHVSGGI-----LID 351 + + +++A V + LAE A+ YA + R V G +I Sbjct: 180 L-----QYMFVMMNAARFQVGVQGIGLAERAYQKAVQYANDRVQSRPVDGSANEAVAIIH 234 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCC 405 P +KR + + + AA A++ ++D A ++EA A M P+ K W Sbjct: 235 HPDVKRMLMSMRSQVEAARAMACVAGAAYDAAHFHADEATRKQNMAVYEFMVPLVKGWST 294 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 295 EMSIDVTSTGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 335 >gi|220922793|ref|YP_002498095.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947400|gb|ACL57792.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 592 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 28/285 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++ + ++ + DG Y + G K F++ D ++LA++EG Sbjct: 161 MNLTEPQAGSDLSGLRTRAEPAGDGSYRIRGEKIFITWGEHDLTDNIVHLVLARIEGAPA 220 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVS 305 + F+VP++L DGS N L L++K+G + T + E G+L+G+ N Sbjct: 221 GTKGISLFVVPKVLPDGSRNDLRCAGLEHKLGIHGSPTCTMVYGEKGGAVGWLVGEANRG 280 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGI-------LIDQPVMKR 357 + M L + V + +A+ YAR RR G +I+ P ++R Sbjct: 281 LACMFTMMNNARLCVGLQGVGIAERAYQQALSYARERRQGRAGAAASGMSPIIEHPDVQR 340 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAV 411 + + AA + + A + D A +EA A ++ P+ K + + V Sbjct: 341 MLLTMKAMTGAARGICYLTAEALDRAHRAPDEAERRAALDRASLLTPVAKAFSTDIGIEV 400 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + ++ GG GY+EE A+H R++ +I G+ +D++ Sbjct: 401 ASLGIQVHGGMGYVEETGAAQHLRDARIAAIYEGTNGIQAIDLVT 445 >gi|15807352|ref|NP_296082.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6460177|gb|AAF11909.1|AE002067_1 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1] Length = 612 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 36/309 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 +GLTE GTD+ I ++ DG Y ++G K F+S+ D ++LA++EG Sbjct: 167 MGLTEPHAGTDLGIIRTKASDNGDGTYSVTGTKIFISAGEHDMSENIVHLVLARLEGSPK 226 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ + + G NG+ L++K+G NAT L F G+L+G++N Sbjct: 227 GTKGISLFLVPKFIPNADGSLGERNGVVCGSLEHKMGIHGNATAVLNFDGAKGWLVGEVN 286 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQ 352 + M L + + + V+ A+ YA+ R + IL+ Sbjct: 287 KGMNHMFIMMNAARLGTGMQGLGLGEVAYQNALAYAKDRIQMRHEPRVSSEEADPILVHP 346 Query: 353 PVMKRAIADIALDIAAATALSFRL------ANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 V + + A A + ++ DEA+ R E ++ PI K + Sbjct: 347 DVRRMLLTGKAYSEAGRALALWLALNLDIESHHADEAQ-RKEAGDMVALLTPIAKAFMTD 405 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464 V ++ + GG GYI+E + + R++ I G+ LD+L +L G Sbjct: 406 NGFNVAVQSQQVFGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLLGRKVLMDGGKK 465 Query: 465 FEQLFSTLE 473 ++L TL+ Sbjct: 466 LQKLAGTLQ 474 >gi|242786918|ref|XP_002480899.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218721046|gb|EED20465.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 608 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 120/512 (23%), Positives = 206/512 (40%), Gaps = 97/512 (18%) Query: 37 YSSDSLLVALIANF-----PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGG 91 Y D L+ +I+ + PS + +L + VLS A N P L G Sbjct: 21 YLEDRALLRIISLYLPTPLPSTISSDLLRFSKLVLSKPVLGYIADAEKNLPYLKPLTSFG 80 Query: 92 E--RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAG 149 E R D + W L I +G+ ++ K ++ +A + Q Sbjct: 81 EENRDDPLVTSEGWRRLQEIGIEEGIVALAYE--------KNSNGEKAGWNPRIHQFVKY 132 Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY--DP-TNK----------APMQKTSV 196 H+ S S A++T P D A K+ + DP TN+ + + Sbjct: 133 HIWSGSS------AIVTCPSAMTDGAAKLLGKHLHDDPETNEIFAHARERLISRQNGFAW 186 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISD------------GIYCLSGHKWFLSSPMSDAFI 244 G +TE++GG+D+ + K++D G + + G KWF S+ ++ I Sbjct: 187 TSGQWMTERKGGSDVRGTETIAVKLNDATDGYDTNGQPLGPWRIDGFKWFSSATDANMTI 246 Query: 245 MLAQVEG-------RVGCFLVP-RLLEDGSP------NGLCYQRLKNKIGNRSNATVELE 290 +LA+ G ++ F P R +GS NG+ QRLKNK+G R Sbjct: 247 LLAKTGGGSDRKDSQISAFYAPLRRRANGSDENQTELNGIRIQRLKNKLGMR-------- 298 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 G+L+G + + + + + I +V LA + +AR R VSG +L Sbjct: 299 -----GYLIGKEGQGVKEISHILNITRMQNIISAVGAYGRGLAISRAFARVRSVSGKLLS 353 Query: 351 DQPVMKRAIADIALDIAAATALSFRLA------NSFDEA-------------KSRSEEAA 391 D R +A ++ A LS+ +A F+ K+ E A Sbjct: 354 DVSAHVRGLAQEHVNYTAHMHLSYFIAALLGRSEGFEPGDDTSAATSSGILPKTMEEINA 413 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSG 447 R++ PI K A + + ME +GG GY+E +IAR +R++ +I G+ Sbjct: 414 LYRLLTPIAKAQTALSAISGLRSCMESLGGVGYLENEDPDLNIARLFRDANVLAIWEGTT 473 Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 + M D + ++++G + ++ + E +G+S Sbjct: 474 DVMADDFVRVVKRGKDGM-KILAVFEGWVGNS 504 >gi|75674835|ref|YP_317256.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gi|74419705|gb|ABA03904.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 592 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/343 (25%), Positives = 163/343 (47%), Gaps = 62/343 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGR 252 LTE + G+D+ A+ S+ ++ SDG Y + G K F++ M+D + +LA++ +G Sbjct: 162 LTEPQAGSDVGALRSRAERASDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGT 221 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 G FL+P+ L D G+ N + +++K+G + T + + G+L+G+ Sbjct: 222 RGISLFLIPKFLVDADGSLGARNDIHASGIEHKLGIHGSPTCTMTMGDDGGAIGYLIGEE 281 Query: 303 NVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH------VSGGI-- 348 N M+ + ++ A + V V +AE A+ YAR R S G+ Sbjct: 282 N------RGMRCMFTMMNQARLCVGLEGVGIAERASQQALAYARERRQGRAAGTSDGMSP 335 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKY 402 +I P +KR + + AAA A+ + A S D A R+ AA ++ PI K Sbjct: 336 IIAHPDVKRMLMQMRALTAAARAICYATAVSLDMAARAADPDVRTAAAARGALLTPIAKA 395 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN------ 456 + + V + ++ GG G+IEE A+HYR++ SI G+ +D++ Sbjct: 396 FSTDIGNEVASLGIQVHGGMGFIEETGAAQHYRDARITSIYEGTNGIQAIDLVTRKLAAD 455 Query: 457 -------LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 LL++ ++ +++ ++ + G++G++ LRD++ Sbjct: 456 DGAAVSALLDELSDTVKRVEASNDPAFGTTGER----LRDALG 494 >gi|254296191|ref|ZP_04963648.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|157806275|gb|EDO83445.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] Length = 599 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 149 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 195 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 196 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 255 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+L+G+ N + M L + + V+ Sbjct: 256 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 315 Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R ++G D+P ++R + A A ++ A Sbjct: 316 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 375 Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A S ++EA ++ PI K + A AM+ GG G+I E + ++ Sbjct: 376 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 435 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 436 VRDARINMIYEGTNSVQALDLLG 458 >gi|103487022|ref|YP_616583.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98977099|gb|ABF53250.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 600 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 54/381 (14%) Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAI 198 Y MA +A M P +T A++ A++ + + PK+ S E+ T Sbjct: 116 YRMAANQA-FAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGGT------------ 162 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA-------- 247 + LTE GTD+ I ++ DG Y ++G K F+SS ++D I L Sbjct: 163 -MNLTEPHCGTDLGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAP 221 Query: 248 -QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 V+G + F+VP+ L EDGS N L +++K+G +N+T + + G+++G+ Sbjct: 222 DSVKG-ISLFIVPKFLVKEDGSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGE 280 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------L 349 N + M L I + ++ A+ YA+ R + L Sbjct: 281 ENKGLAAMFVMMNAARLGVGIQGLGQADIAFQNAVAYAQDRRQGRALTGPKDPQEKADPL 340 Query: 350 IDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 P ++R + D + AL LA+ + + R ++ P+ K + Sbjct: 341 FVHPDVRRMLMDAKATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGY 400 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461 V A + GG GYIEE ++++ R++ I G+ +D++ L + G Sbjct: 401 GTDKGYEVATNAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNG 460 Query: 462 TNLFEQLFSTLEQDLGSSGKK 482 + LF+ ++ + ++ K Sbjct: 461 GRAIQTLFAIVDAECAAAKDK 481 >gi|53718291|ref|YP_107277.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Burkholderia pseudomallei K96243] gi|76810606|ref|YP_332270.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1710b] gi|126440782|ref|YP_001057732.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 668] gi|126452094|ref|YP_001064977.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1106a] gi|134279500|ref|ZP_01766212.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|167718152|ref|ZP_02401388.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei DM98] gi|167737181|ref|ZP_02409955.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 14] gi|167814314|ref|ZP_02445994.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 91] gi|167822790|ref|ZP_02454261.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 9] gi|167844365|ref|ZP_02469873.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei B7210] gi|167892877|ref|ZP_02480279.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 7894] gi|167901363|ref|ZP_02488568.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei NCTC 13177] gi|167909593|ref|ZP_02496684.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 112] gi|167917608|ref|ZP_02504699.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei BCC215] gi|217419388|ref|ZP_03450894.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|226196647|ref|ZP_03792227.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|237810882|ref|YP_002895333.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei MSHR346] gi|242316558|ref|ZP_04815574.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|254187697|ref|ZP_04894209.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254196771|ref|ZP_04903195.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|254260436|ref|ZP_04951490.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] gi|52208705|emb|CAH34641.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Burkholderia pseudomallei K96243] gi|76580059|gb|ABA49534.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710b] gi|126220275|gb|ABN83781.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 668] gi|126225736|gb|ABN89276.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106a] gi|134248700|gb|EBA48782.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|157935377|gb|EDO91047.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|169653514|gb|EDS86207.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|217396692|gb|EEC36708.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|225931178|gb|EEH27185.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|237505147|gb|ACQ97465.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei MSHR346] gi|242139797|gb|EES26199.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|254219125|gb|EET08509.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] Length = 595 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGTYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+L+G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWLIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R ++G D+P ++R + A A ++ A Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A S ++EA ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454 >gi|71906854|ref|YP_284441.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] gi|71846475|gb|AAZ45971.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] Length = 593 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 64/379 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ ALM T + P + S E+ T + LTE G+ Sbjct: 125 LCPMLTQGAIEALMIAGTDEQKAAYLPNLVSGEWTGT-------------MNLTEPSAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258 D+AA+ S+ + + DG Y + G K F++ M+D + +LA+ EG G F+V Sbjct: 172 DLAAVRSRAEPVGDGTYKVFGQKIFITYGEHDMTDNIVHLVLARTPNAPEGVKGISLFVV 231 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L DG+P N + +++K+G + T L F + G L+G+ N +E Sbjct: 232 PKFLLKADGTPGERNDVYCVSIEHKLGIHGSPTAVLAFGDNGGAIGTLVGEENRG---LE 288 Query: 311 DMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------HVSGGI---LIDQPVMKRA 358 M I++ + + G+ + A+ YA+ R V GG +I P ++R Sbjct: 289 YMFIMMNAARFNVGLEGLGDAERAYQRAVVYAKERVQGTEVGVRGGPKVPIIKHPDVRRM 348 Query: 359 IADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVI 412 + + I A AL++ A + D A R++ A+A ++ P+ K W + A + Sbjct: 349 LMSMRSRIEAMRALAYVTAAAQDNAHGNPDEVERTKAQAFADLLIPVVKGWSTESAIDIA 408 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL----- 464 + ++ GG GYIEE A+H R++ +I G+ D++ EKG + Sbjct: 409 SLGVQVHGGMGYIEETGAAQHLRDARITAIYEGTTAIQANDLIGRKIAREKGVTIKSVIA 468 Query: 465 -FEQLFSTLEQDLGSSGKK 482 S L+ DL S G + Sbjct: 469 EMRAAASQLDGDLASIGAR 487 >gi|192290813|ref|YP_001991418.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192284562|gb|ACF00943.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + ++ + D Y ++G K F++S M +I A G G V Sbjct: 128 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 186 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL G GL LK K+G ++ T L F N G LLG M I++ Sbjct: 187 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----MIIMM 240 Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S ++ ++ RV L EA YAR+R G L+ V++ + D+A IAA+ A Sbjct: 241 NFNSERLTMAAGCIAASRVCLDEATEYARQRFTFGKPLVKHQVIRHKLVDMAQKIAASQA 300 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA D+ +S E + A T +C +EA++ GG+GY+ + Sbjct: 301 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 353 Query: 432 RHYRESPANSILLGSGNAM 450 R YR+ N+I G+ M Sbjct: 354 RIYRDVKVNAIGGGTEEIM 372 >gi|91975284|ref|YP_567943.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91681740|gb|ABE38042.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 596 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 34/291 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE + GTD+ + ++ K +DG Y L+G K F+S+ ++D I +LA++EG Sbjct: 163 MNLTEPQCGTDLGLLRTKAVKQADGSYKLTGTKIFISAGEHDLADNIIHLVLARIEGAPA 222 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L + G+ NG+ +++K+G NAT + + + G+L+G+ N Sbjct: 223 GIKGVSLFVVPKFLVNPDGSIGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEEN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV----- 354 + M L A+ ++ V+ A+ YAR R +SG D+P Sbjct: 283 KGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIV 342 Query: 355 ---MKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 ++RA+ I A + TAL +A+ D+AK R + +M P+ K Sbjct: 343 HPDVRRALLTIRSFNEAARALVMWTALKSDVAHRSDDAKERQTADDHLGLMTPVLKGVLT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + A + GG GYI + + R++ I G+ LD++ Sbjct: 403 DVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|99078037|ref|YP_611295.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040] gi|99035175|gb|ABF62033.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040] Length = 570 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 26/301 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VE 250 + LTE + G+D+ A++S+ + DG Y +SG K ++S +D ++LA+ V Sbjct: 161 MNLTEPQAGSDVGALSSKAEDNGDGTYAVSGQKIYISWGDNDFTENVCHLVLARLPDGVP 220 Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ L E+G+P N L L++K+G + T +++ G+L+G + Sbjct: 221 GTKGISLFLVPKYLPDENGNPGKANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLVGKEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSG--GILIDQPVMK 356 + M L V + A+ YA R V G G ++D ++ Sbjct: 281 GGMAAMFTMMNNARLGVGGQGVGVAEGAYQHALAYALDRKQGKTPVEGGTGTIVDHADVR 340 Query: 357 RAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 R + ++ D+ AA A+ A + D A +E A + PI K + + V + Sbjct: 341 RMLMEMKADVYAARAIMLACAGAIDMGTATGDAEWKTRAAFLTPIAKAFGTETGIRVAEQ 400 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-VLNLLEKGTNLFEQLFSTLE 473 ++ GG G+IEE A+ YR+ +I G+ +D V + G + +L +E Sbjct: 401 GVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDLVARKMMDGGEMAHRLIDEIE 460 Query: 474 Q 474 + Sbjct: 461 E 461 >gi|163743962|ref|ZP_02151332.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] gi|161382807|gb|EDQ07206.1| acyl-CoA dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] Length = 593 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 70/414 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ + ++ + DG Y ++G K Sbjct: 148 YLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQDDGSYKITGQKI 194 Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F+SS M+D I +LA++ G V F+VP+ + EDGS NG+ +++ Sbjct: 195 FISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKEDGSLGDRNGVSVGKIEE 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G N+T + + + G+LLG + + M L + ++ + A+ Sbjct: 255 KMGIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVGMQGLAQAEAAYQNALE 314 Query: 338 YARRR----HVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA+ R V+G LI P ++R + D A A A D+A Sbjct: 315 YAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGARAFILWGAKMIDQAHR 374 Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 ++ A I + P+ K + + +A + GG GYIEE ++++ R++ I Sbjct: 375 AEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEEWGMSQYTRDARIAMIY 434 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 G+ LD++ L QD GK V+ + CKE+ ++ Sbjct: 435 EGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMVKNFCKENGDISES 478 Query: 504 LTEKI--ALASSAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHII 555 +++ L +++ L AGM F++N + ++ L G ++ H+ Sbjct: 479 YSKEFIEPLKAASKDLQAAGM-----YFMQNGMTNPNNA----LSGSYDFMHMF 523 >gi|171463914|ref|YP_001798027.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193452|gb|ACB44413.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 595 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 95/375 (25%), Positives = 182/375 (48%), Gaps = 65/375 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T +P + + + PK+ S E+ T + LTE + G+ Sbjct: 126 LCPLLTDGAIEALLTAASPALQEQYVPKMISGEWTGT-------------MNLTEPQAGS 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++ + S+ DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 173 DLSMVCSRAVPEGDGTYKIFGTKIFITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 233 PKFLVNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRG---LE 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKR 357 M + +++A +V +++AE A+ YA+ R S + +I QP +KR Sbjct: 290 YM--FVMMNAARFAVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKR 347 Query: 358 AIADIALDIAAATALSFRLANSF-------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + + I A+ AL++ A+++ DEA ++ +A Y + PI K + +M+ Sbjct: 348 MLMTMRAYIEASRALAYYAASAYDAQHAAPDEAVRKANQAVY-EFLVPIVKGFSTEMSID 406 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468 V + ++ GG G+IEE A+HYR++ +I G+ D++ + G + ++L Sbjct: 407 VASLGVQVHGGMGFIEETGAAQHYRDARILTIYEGTTAIQANDLIGRKTVRDGGAIAKEL 466 Query: 469 ---FSTLEQDLGSSG 480 + E+DL +SG Sbjct: 467 SQRIAATEKDLAASG 481 >gi|149204214|ref|ZP_01881182.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035] gi|149142656|gb|EDM30701.1| acyl-CoA dehydrogenase-like protein [Roseovarius sp. TM1035] Length = 572 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 37/286 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ----VE 250 + LTE + G+D+ A+ S+ + + DG Y ++G K ++S +D ++LA+ V Sbjct: 161 MNLTEPQAGSDVGALRSKAEPMGDGTYAVTGQKIYISWGDNDFTENVCHLVLARLPDGVP 220 Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ + E+G+P N L L++K+G + T +++ G+L+G+ + Sbjct: 221 GTKGISLFLVPKFIPDENGAPGKQNSLKVVSLEHKMGLHGSPTAVMQYDGAIGWLVGEAH 280 Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI--LI 350 + M+ + +++A + V G + +AE A+ YA R V GG +I Sbjct: 281 ------DGMRAMFTMMNNARLGVGGQGIGVAEGAYQHALAYAMDRKQGRTPVQGGSGSII 334 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMA 408 + ++R +A + DI AA A++ A + D A + AA A + PI K + Sbjct: 335 EHADVRRMLATMKADIFAARAIALACAQAIDMQTATDKPHWAARAAFLTPIAKAFGTDTG 394 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 AV ++ GG G+IEE A++ R+ +I G+ +D+ Sbjct: 395 IAVAEMGVQVHGGMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDL 440 >gi|254486755|ref|ZP_05099960.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214043624|gb|EEB84262.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 593 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 32/288 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE GTD+ + ++ DG Y ++G K F+SS D ++LA++EG Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQGDGSYKITGQKIFISSGEHDMAANIIHLVLAKIEGGPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS NG+ ++ K+G N+T + + G+LLGD + Sbjct: 221 GIKGVSLFIVPKFIVKEDGSLGDRNGVAVGSIEEKMGIHGNSTCVMNYDGATGYLLGDEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG--------ILID 351 + M + + ++ V+ A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARIGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGAENPNGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA---AYARIMAPITKYWCCKMA 408 P ++R++ D + A A AN D A RSE+ +M P+ K + + Sbjct: 341 HPDIRRSLMDQKSFVEGARAFILWGANLID-AAHRSEDKDADGLVSLMTPVIKGFLTDVG 399 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 400 YDMTVKAQQIYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447 >gi|56698615|ref|YP_168992.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56680352|gb|AAV97018.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 588 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/322 (27%), Positives = 146/322 (45%), Gaps = 47/322 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE + G+D++ + DG Y +SG K F++ D ++LA+ E Sbjct: 161 MNLTEPQAGSDLSRVRCTAVPQDDGTYAISGTKIFITFGEHDLSENIVHLVLARTPDAPE 220 Query: 251 GRVGC--FLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP+LL E N L L++K+G R++ T +E+ N G+L+G+ N Sbjct: 221 GVRGLSLFVVPKLLAGEGGETSQRNTLGCVSLEHKLGVRASPTAVMEYDNATGYLVGEEN 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQPV 354 + I + SA +V V++AE A+ YAR R V G P+ Sbjct: 281 SGL-----RYMFIMMTSARYAVGVQGVAIAERAYQHALSYARDRIQSRPVDGSAQDAVPI 335 Query: 355 MK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 ++ RA+ + +A AT LA E ++R+E + A + P+ K + Sbjct: 336 IQHPDVRRMLLRMRALTEGGRALAIATGGWLDLAEHGPE-EARAEAQSMAEFLVPLVKGF 394 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461 C + A V + ++ GG G+IEE +A+ YR++ I G+ D+L +L G Sbjct: 395 CTERAVEVASLGVQIHGGMGFIEETGVAQFYRDARILPIYEGTTAIQANDLLGRKVLRDG 454 Query: 462 TNL---FEQLFSTLEQDLGSSG 480 F ++ + E +L G Sbjct: 455 GRTARRFAEMIAATEGELSKGG 476 >gi|94499983|ref|ZP_01306518.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65] gi|94427841|gb|EAT12816.1| acyl-CoA dehydrogenase family protein [Oceanobacter sp. RED65] Length = 589 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 81/354 (22%), Positives = 154/354 (43%), Gaps = 46/354 (12%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ ++ AL + + P++ S E+ T + LTE + GT Sbjct: 127 MYPGLSHGAIDALTEHAEQELKDKYLPQLISGEWTGT-------------MCLTEPQCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ + +DG Y +SG K +++ D ++LA++ G + FLV Sbjct: 174 DLGLIRTKAEPQADGSYNISGTKIWITGGEHDMVDNIVHLVLAKLPGAPDSSKGISLFLV 233 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----KI 314 P+ LEDGS N L++K+G + +AT + F G+L+G N + M +I Sbjct: 234 PKFLEDGSRNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLIGKENEGLKCMFTMMNAARI 293 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIADIALDI 366 ++ + ++ ++SL A + R ++G +I P ++R + + + Sbjct: 294 MVGVQGLGLAEKAYQISLGFAKERLQSRSLTGPKSPDEKADPIIVHPDVRRMLMQQKVFL 353 Query: 367 AAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 A +++ LA+ D+ R E +IM PI K + +A++ +G Sbjct: 354 EGARCMAYFTGYHLDLAHKHDDESVREESDDIVQIMTPIIKAYLTDEGFFSTDQALQSMG 413 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 GSG+ ++ + + R+ I G+ LD+ L KG L + F + Sbjct: 414 GSGFTQDWEVEQLLRDGRIARIYEGTNGIQALDLTGRKLTIKGGRLPKTFFKVM 467 >gi|259416521|ref|ZP_05740441.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] gi|259347960|gb|EEW59737.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] Length = 593 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 96/398 (24%), Positives = 165/398 (41%), Gaps = 66/398 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264 + DG Y ++G K F+S+ MS+ I +LA++ G V F+VP+ + D Sbjct: 179 AEPQDDGSYKITGQKIFISAGDHDMSENVIHLVLAKIPGGPEGIKGVSLFIVPKFIVNAD 238 Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 G+P NG+ +++ K+G N+T + + G+LLGD++ + M L Sbjct: 239 GTPGERNGVSVGKIEEKMGIHGNSTCVMNYDAATGWLLGDMHKGMRAMFTMMNEARLGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAA 369 + ++ + A+ YA+ R V+G LI P ++R + D A Sbjct: 299 MQGLAQAEAAYQNAVEYAKDRLQGRDVTGAKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D+A ++ A I + P+ K + + +A + GG GYIEE Sbjct: 359 RAFILWGATMIDKAHRSEDKDADGLISLLTPVIKGFLTDKGYDMTVQAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 ++++ R++ I G+ LD++ L QD GK V+ Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462 Query: 488 RDSISLCKEDKGL----ARFLTEKIALAS---SAAALY 518 CKE+ + A+ E + AS AA +Y Sbjct: 463 DLVKGFCKENAEISDSYAKDFIEPLKAASKDLQAAGMY 500 >gi|319760887|ref|YP_004124824.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330822791|ref|YP_004386094.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317115448|gb|ADU97936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329308163|gb|AEB82578.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 385 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 17/274 (6%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PM 239 RE+ P M V L +TE G+D+ AI + + + DG + ++G K F+++ Sbjct: 117 REFLPK----MASGEVVGSLAMTEPGAGSDLKAIRTTAKAV-DGGFEITGQKTFITNGAH 171 Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296 +D I+ A+ G + D G R+ +KIG + T EL F F Sbjct: 172 ADRVIVFAKTSPEAGARGISLFWVDTKTPGFAVGRVLDKIGQLAQDTAELFFDKVFVPRD 231 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+G+LN G + L A+ + V+L I Y ++R G LID ++ Sbjct: 232 ALIGELNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIDYVKQRQAFGHALIDNQYIR 291 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +ADI AA A + + + ++ AA A K W + A I + M Sbjct: 292 FRLADIKTHAAATRAFVDSCLAQYLQGQLTADGAAMA-------KLWASE-ATRAIDDLM 343 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG+GY+ E IAR Y + N I GS M Sbjct: 344 QFFGGNGYMREYPIARAYADVRPNRIYGGSSEIM 377 >gi|146324137|ref|XP_753642.2| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293] gi|129558050|gb|EAL91604.2| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293] gi|159126625|gb|EDP51741.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163] Length = 647 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 116/507 (22%), Positives = 210/507 (41%), Gaps = 77/507 (15%) Query: 35 NAYSSDSLLVALIANF-PSVVHKELE----LLGEYVLSCTAQELARMANYNTPQLHAYGP 89 N Y++D+ L L++ + PS ++ ++ LGE +S +E + A + P + Y Sbjct: 26 NTYTTDANLHRLLSWYLPSSTYQSIQSNLTQLGEEAISPQIREWSADAERHQPYVKGYNV 85 Query: 90 GGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 G+R+D ++ W L R G+ +D S+ R + + YL Sbjct: 86 WGQRYDYDRLVTSEGWKQLSRWGARHGVVALGYDPSYGASRRLVQYTVN----YLYG--P 139 Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPK------IFSREYDPTNKAPMQKTSVAIGLG 201 + L S V AL+ + ++ + P+ +F+R T++ TS G Sbjct: 140 SSGLTSCPVAMTDGAALILSQQLQQHAFPEDHPFRVVFNRL---TSRNEDFWTS---GQW 193 Query: 202 LTEKRGGTDIAAITSQGQ----------------------KISDGIYCLSGHKWFLSSPM 239 +TE+ GG+D+ + + +G Y +SG K+F S+ Sbjct: 194 MTERAGGSDVQNTETWATHDPVPASSTASNNNITNNNPLGTLGEGEYSISGFKFFSSATD 253 Query: 240 SDAFIMLAQV--EGRVGCFLVPRLLEDGSPN--------GLCYQRLKNKIGNRSNATVEL 289 ++ ++LA+ G++ FL P PN G+ RLKNK+G + T EL Sbjct: 254 ANVTLLLAKTAPSGKLSTFLAPLRRTITGPNQAPREVTNGVRIHRLKNKLGTKELPTAEL 313 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 E + L+G + + + + + I S+ R +L+ A ++R R G L Sbjct: 314 ELRDMRAHLVGPRDKGVATIAPLLNVTRTHTFIGSLGAWRRALSIARAFSRARSTVGEPL 373 Query: 350 IDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKS-------RSEEAAYARI 395 P+ R +A++ + AA L F + N D + ++ R Sbjct: 374 WLIPMHLRLLAEVEVRQRAAMQLGFFTVAVMGVVENPGDPGAAVPAHVPNGADATVVFRA 433 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAM 450 + ++K KMA I E E +GG GY++E +++R R + NSI G+ N + Sbjct: 434 LTAVSKAVISKMAIVGIQECQEAMGGVGYMDEPDEPEFNVSRLLRNTAVNSIWEGTTNVL 493 Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLG 477 +++ L N F + +E+ LG Sbjct: 494 ASEMVRFLLAREN-FAVFAAWVERVLG 519 >gi|300313303|ref|YP_003777395.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300076088|gb|ADJ65487.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 591 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 54/342 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252 LTE + G+D+ + ++ DG Y LSG K F+S D ++LA++ G Sbjct: 166 LTEAQAGSDLGQLRTRAVPQDDGSYRLSGDKIFISGGEHDLTPNIVHLVLARLPDAPAGS 225 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G FL PR+L+DGS NG+ +++K+G +AT L F +L+G+ Sbjct: 226 KGLSLFLAPRVLDDGSRNGVHCTGIEHKMGIHGSATCSLHFEQAQAWLVGEAGRGLA--- 282 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVS-------GGILIDQPVMKRA 358 + + +++A + V + LAEA + YAR R S +++ P +++ Sbjct: 283 --AMFVMMNAARLHVGAQGLGLAEAAYQRASAYARERRQSRAPGSSGNDLIVHHPAVQKL 340 Query: 359 IADIALDIAAATALS------FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + I A L+ LA EA RS + P+ K + Sbjct: 341 LMEQRCRIEGARLLTCWAGLLLDLAEHDPEAALRSRHHERLEFITPVIKAFLTDQGFQCA 400 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 + A++ GG GY+ E I + R++ + ++ +GTN + + + Sbjct: 401 SRALQVFGGHGYVVETGIEQFMRDA----------------RITMIYEGTNEIQAIDFLM 444 Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 + LG G++ L D + L + D A L E+ L A Sbjct: 445 RKVLGDEGRR----LDDFLGLVRADIAEASGLGEQARLLGEA 482 >gi|85703464|ref|ZP_01034568.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217] gi|85672392|gb|EAQ27249.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217] Length = 600 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 50/310 (16%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ S+ + +DG Y ++G K ++ Sbjct: 178 PKLVSGEWSGT-------------MNLTEPQAGSDVGALRSKAEADADGTYAITGQKIYI 224 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA+ V+G G FLVP+ + D G N L L++K+ Sbjct: 225 SWGDNDFTENVCHLVLARLPDGVQGTKGISLFLVPKFIPDESGNPGKQNSLKVVSLEHKM 284 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE---- 334 G + T +++ G+L+G P + M+ + +++A + V G + +AE Sbjct: 285 GLHGSPTAVMQYDRATGWLVGK------PHDGMRAMFTMMNNARLGVGGQGIGVAEGAYQ 338 Query: 335 -AIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS- 385 A+ YA R G +I+ ++R +A + DI AA A++ A + D S Sbjct: 339 HALAYAMDRKQGRTPSEAGTGSIIEHADVRRMLATMKADIFAARAIALACAQAIDMQTST 398 Query: 386 -RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 ++ ++ A + PI K + A+ ++ GG G+IEE A++YR+ +I Sbjct: 399 GKAHWSSRAAFLTPIAKAFGTDTGIAMAEMGVQVHGGMGFIEETGAAQYYRDVRVTAIYE 458 Query: 445 GSGNAMVLDV 454 G+ +D+ Sbjct: 459 GTNGIQAMDL 468 >gi|84502508|ref|ZP_01000644.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84389320|gb|EAQ02117.1| probable acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 594 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 46/382 (12%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM 245 +PM + + L+E + G+ ++ IT+Q ++ DG Y +SG K ++S +S+ I Sbjct: 149 SPMLEGRFLGTMCLSEPQAGSSLSDITTQARRREDGTYSISGRKMWISCGDHNISENIIH 208 Query: 246 LA---------QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF 291 L V+G + F+VP+ D G N + L +K+G ++ L F Sbjct: 209 LVLAKLPDSPPGVKG-ISLFVVPKYRVDADGQIGVQNDVALAGLNHKMGYKATTNCALNF 267 Query: 292 S---NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 + G+L+G L + + +I + + + + G + SLA A + RH Sbjct: 268 GENGDCIGYLIGKEHQGLRYMFQMMNEARIAVGVGATALGQCGFQASLAYARERPQGRHP 327 Query: 345 SGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------ 391 +L D ++R + + A AL A+ D A S SEE Sbjct: 328 DNKDATKPQVLLTDHADIRRLLLAQKAAVEGALALCLYCASLVDLAASTSEEDERHEAEL 387 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ PITK W + A++ +GG+GY + I R YR++ N I G+ Sbjct: 388 LLEMLTPITKSWPSEFCLEANKHALQVLGGAGYTRDYPIERCYRDNRLNPIHEGTHGIQG 447 Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 LD L +L + + + L + D+ ++ + V L +S+ D+ L RF + Sbjct: 448 LDFLGRKVLMQDSAGVKLLVERIRTDMAAANRTVSPDLIESL-----DEALERFEVVTRS 502 Query: 510 LASSAAALYRAGMNDIADVFLE 531 L A RAG+ + A +FL+ Sbjct: 503 LTEEVARDRRAGLAN-ATLFLD 523 >gi|330818283|ref|YP_004361988.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3] gi|327370676|gb|AEA62032.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3] Length = 595 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + I+ G Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPITGGAYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMAKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+L+G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNATGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G ++P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454 >gi|146340423|ref|YP_001205471.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146193229|emb|CAL77244.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 569 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 46/382 (12%) Query: 149 GHLMSPSVTSASMVALMTTPR-VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G L P ++ ++ TT + +W PK+ + E+ T + ++E Sbjct: 128 GMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIAGEWGAT-------------ICISEVGA 174 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPR 260 G+D++ I ++ DG + ++G K ++S D +LA+ EG G FLVP Sbjct: 175 GSDVSRIRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPD 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + DG+ NG+ ++L++K+G + T + F + G LLG+ ++ + + + Sbjct: 235 RI-DGAANGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLA-----QMFVMITN 288 Query: 321 AIMSVSGMRVSLAEAIHYAR----RRHVSGGI------LIDQPVMKRAIADIALDIAAAT 370 M+V M + +A A R+ + GG +I ++R + + D+ A Sbjct: 289 MRMAVGAMGLGIASAAADVALAYARQRLQGGAGPQPLPIIVHADVQRTLLSMQADVECAR 348 Query: 371 ALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AL + A D A+ +R + AA A+ + PI K ++A A A++ +GG+GY Sbjct: 349 ALIYAAAVEADLARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQVLGGAGY 408 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSSGKK 482 + + + R+S I G+ LD+L+ L + G S D+ ++ Sbjct: 409 TTDWPVEQLLRDSRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAER 468 Query: 483 VITILRDSISLCKEDKG-LARF 503 + + I L + G LAR Sbjct: 469 DVAAATEIIDLLETTAGQLARM 490 >gi|158522175|ref|YP_001530045.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511001|gb|ABW67968.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 605 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 143/344 (41%), Gaps = 52/344 (15%) Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T +A M+ + T K + +++ ++ T + LTE G Sbjct: 124 MMYPGLTHGAAKMIESLGTEEQKKIYVKNMYTGKWAGT-------------MLLTEPDAG 170 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ A+T+ +K DG Y ++G+K F+S+ M++ I +LA++EG + F+ Sbjct: 171 TDVGALTTTAKKNDDGTYSITGNKIFISAGEHDMTENIIHPVLARIEGAPAGTRGISLFI 230 Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPV 309 VP R+ DGS N + ++ K+G NAT L N G LLG N + Sbjct: 231 VPKYRVNPDGSLGEFNDVVCTGIEEKMGIHGNATCSLTLGGKGNCIGTLLGQENKGMKAM 290 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------IDQPVMKR 357 M + S S A A+ YA+ R +L I P ++R Sbjct: 291 FLMMNEARFGVGVQGFSLGATSFANAVAYAKERIQGRELLKFMDADAPSVNIIKHPDVRR 350 Query: 358 AIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + + AL + +A FD E+ + + A + P+ K +C V Sbjct: 351 QLLVMKSYVEGMRALLYYVARCFDMERVLEESDEKEKYKALIEFLIPVVKAYCTDKGFEV 410 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M+ GG GYI E + R+ SI G+ +D+L Sbjct: 411 CVLGMQVYGGYGYIAEYPQEQLVRDCKITSIYEGTNGVQAMDLL 454 >gi|27376092|ref|NP_767621.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27349231|dbj|BAC46246.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 409 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 102/372 (27%), Positives = 164/372 (44%), Gaps = 40/372 (10%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ P AL R++ GL + + + Q KI A++ +AQ A Sbjct: 58 PFAHEWDEAGEFP--RALYRKAAEIGLLGLGFPEEYGGIAADQFMKIVASQE--LAQAGA 113 Query: 149 G----HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 G LMS ++ S +A P V P++ + E K S L +TE Sbjct: 114 GGVSASLMSHTIGSPP-IARAARPEVKARVLPQVLAGE----------KISA---LAITE 159 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 GG+D+A + ++ ++ D Y +SG K F++S M ++ +A G G V LL Sbjct: 160 PGGGSDVANLRTRARRDGDH-YVVSGEKTFITSGMRADYLTVAVRTGGEGAGGVSLLLIA 218 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G GL +LK K+G ++ T L F + + N+ + KI++ +S M Sbjct: 219 GDTPGLSRTKLK-KMGWWASDTATLHFDDC---RVPAENLIGEEGQGFKIIMQNFNSERM 274 Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++ RV L EAI YA+ R G L V++ I D+A +AA+ A+ LA Sbjct: 275 GMAAGCTAFARVCLDEAIAYAKERKTFGKPLAQHQVIRHKIVDMAQKVAASQAMLEMLAW 334 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ +S E + A T +C +EA++ GG+G++ R YRE Sbjct: 335 RLEQGESPVAEICMMKNQATQTMAFCA-------SEAVQIFGGAGFMRGIKAERIYREVK 387 Query: 439 ANSILLGSGNAM 450 N+I G+ M Sbjct: 388 VNAIGGGTEEIM 399 >gi|119898785|ref|YP_933998.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119671198|emb|CAL95111.1| putative acyl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 595 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 101/418 (24%), Positives = 182/418 (43%), Gaps = 75/418 (17%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V A + + T + W K+ S E+ T + LTE + G+D+AA Sbjct: 130 NVGQAEALLIAATDEQKQTWLHKVVSGEWGST-------------MNLTEPQAGSDLAAT 176 Query: 215 TSQGQKISDGIYCLSGHKWFLS------SPMSDAFIML------AQVEGRVGCFLVPRLL 262 ++ + +DG Y L G K F+S +P ++ A V+G + F+VP+ L Sbjct: 177 RARAEPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKG-LSLFIVPKYL 235 Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + G N + +++K+G + T + + + G+L+G N +E M Sbjct: 236 VNADGSLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRG---LETM-- 290 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRR--------HVSGGILIDQPVMKRAIAD 361 I ++ A V LAE A+ YAR R +G ++ P +KR + Sbjct: 291 FIMMNEARFGVGVQGAGLAERAYQFALGYARDRVQGRDAVSGEAGKPILHHPDVKRMLLG 350 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 + + A AL + A FD A +++A Y ++ P+ K W ++ V EA Sbjct: 351 MRARVMAMRALLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWSTEVGNDVCDEA 410 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 ++ GG G++EE IA+ +R++ +I G+ D++ G + + +TL Sbjct: 411 IQVFGGMGFVEETGIAQFFRDARIITIYEGTTGIQANDLI-----GRKILRENGATL--- 462 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARF---LTEKI-ALASSAAALYRAGMNDIADVF 529 +++I L ++ +ED+ LA E I AL ++A + G + +ADV Sbjct: 463 -----RELIADLSATVLALREDEQLADIADAFAETIDALETAADWVLANGKDRLADVL 515 >gi|146343493|ref|YP_001208541.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146196299|emb|CAL80326.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 596 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 139/319 (43%), Gaps = 47/319 (14%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K + PK+ + E+ T + LTE GTD+ + ++ + +DG + +SG Sbjct: 148 KTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFKISGT 194 Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275 K F+S+ D ++LA++EG + F+VP+ + + G+ NG+ + Sbjct: 195 KIFISAGEHDLADNIIHLVLARIEGAPAGIKGISLFVVPKFMVNADGTLGARNGVMCGSI 254 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 ++K+G N+T + + N G+L+G+ N + M L A+ ++ V+ A Sbjct: 255 EHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNA 314 Query: 336 IHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLA 377 YAR R ++G D+P + RA + A + T+L +A Sbjct: 315 AAYARERIQGRSLTGAKATDKPADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLKSDVA 374 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + + K R + +M P+ K + M A +A + GG GYI E + + R++ Sbjct: 375 HRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVQAQQMYGGHGYIAEWGMEQFVRDA 434 Query: 438 PANSILLGSGNAMVLDVLN 456 I G+ LD++ Sbjct: 435 RIAMIYEGANGIQALDLVG 453 >gi|254454294|ref|ZP_05067731.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238] gi|198268700|gb|EDY92970.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238] Length = 591 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 102/438 (23%), Positives = 184/438 (42%), Gaps = 74/438 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + E+ T + LTE GT Sbjct: 124 MYPGLTHGNISAIVTHGTDAQKAMYLPKMATGEWSGT-------------MNLTEPHCGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFLV 258 D+ + ++ DG Y +SG K ++S+ +SD I +LA++ G + F+V Sbjct: 171 DLGLMRTKAVPQDDGTYKISGQKIWISAGEHDLSDNIIHLVLAKIPGGPDGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + EDGS N L L+ K+G NAT + + G+L+G+++ + M Sbjct: 231 PKFMVHEDGSLGERNALSCGGLEEKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV--------MKRAIAD 361 L + + V+ A+ +AR R V+G D+P ++R + D Sbjct: 291 NEARLGVGLQGYAQGAVAYENALGFARDRLQGRAVTGVEAPDKPADPIIVHPDVRRNLMD 350 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECI 419 + A AL++ A D + +E A A I M P+ K + A + + Sbjct: 351 QKSFVEGARALTYWGATLMDRSHKNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTL 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GGSG+ +E + + R++ I G+ LD++ + LG + Sbjct: 411 GGSGFTQEWGLEQFVRDARITMIYEGTNGIQALDLVG-----------------RKLGLN 453 Query: 480 GKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDN 537 G K + + I + ++KG A F + + L ++ L AGM F+ N Sbjct: 454 GGKTVMAFFEIIKTYIADNKGDAAFEADFLEPLKEASKDLQAAGM----------YFMQN 503 Query: 538 CHSTHCMLHGRFNAAHII 555 + + L G ++ H++ Sbjct: 504 MKNPNDALSGSYDFMHMM 521 >gi|163745780|ref|ZP_02153139.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex HEL-45] gi|161380525|gb|EDQ04935.1| acyl-CoA dehydrogenase family protein [Oceanibulbus indolifex HEL-45] Length = 593 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 43/329 (13%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--ED 264 DG Y +SG K F+SS M+D I +LA++EG V F+VP+ + ED Sbjct: 179 AVPQDDGSYKISGQKIFISSGEHDMADNIIHLVLAKIEGGPEGIKGVSLFIVPKFMVKED 238 Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 GS NG+ ++ K+G N+T + + G+LLG + + M + Sbjct: 239 GSLGERNGVSVGSIEEKMGIHGNSTCVMNYDGATGYLLGTEHKGMRAMFTMMNEARVGVG 298 Query: 322 IMSVSGMRVSLAEAIHYA----RRRHVSGGI--------LIDQPVMKRAIADIALDIAAA 369 + ++ V+ A+ YA + R V+G + LI P ++R++ D + AA Sbjct: 299 MQGLAQAEVAYQNAVIYANDRLQGRAVTGAVAPEKAADPLIVHPDIRRSLMDQKSFVEAA 358 Query: 370 TALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D A ++ A ++ P+ K + + +A + GG GYIEE Sbjct: 359 RAFILWGATMIDAAHRADDKDADGLVSLLTPVIKGFLTDQGYDMTVKAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456 +++ R++ I G+ LD++ Sbjct: 419 WGMSQFTRDARIAQIYEGANGVQALDLVG 447 >gi|312884108|ref|ZP_07743820.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368156|gb|EFP95696.1| putative acyl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122] Length = 384 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 M+ + + + + PK+ + E+ LG LTE G+D AA+T+ Sbjct: 96 MIGSFGSEEIKQQYCPKLITAEW----------------LGSYCLTEPNAGSDAAALTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K++D Y L+G K F+S +D +++A+ G G V + + NG+ Y R + Sbjct: 140 A-KLTDEGYVLNGSKVFISGAGDTDVLVVMART-GEPGAKGVSAFVVPANANGISYGRRE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G + MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRSITFDNVLVEKSNLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQHA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G + D ++ +AD+A ++ AA + A+ D ++ Sbjct: 256 LEQATQYMQERKQFGKPIADFQALQFKLADMATELVAARQMVRLAASKLDNGDTQ----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V +A++ GG GYI E + RH+R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDIGFKVCDQALQIHGGYGYIREYPLERHFRDVRVHQILEGTNEIMR 369 Query: 452 LDVL-NLLEKGTNLF 465 L + LL G +F Sbjct: 370 LIIARRLLTDGLQIF 384 >gi|330895556|gb|EGH27866.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 190 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 7/183 (3%) Query: 26 NQPPLFIGMNAYSSDSLLVALIANFPS-VVHKELELLGEYVLSCTAQELARMANYNTPQL 84 NQPP G N Y D L + F + ++ G + +AN + P+ Sbjct: 14 NQPPPLDGANLYRIDVPLQDWSSRFGAGWAQPRIDAYGA-LAGGPLMAAGFLANRHKPEF 72 Query: 85 HAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMA 144 ++ G R D VEFHPA+H L+ +I G+ W + AH RAA YL Sbjct: 73 ASHDRYGHRIDLVEFHPAYHQLMSAAIEHGIPSLPWTYP-----QPGAHVARAAMSYLHT 127 Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 Q + G ++T AS+ AL P + + W PK+ S EYDP N K IG+ +TE Sbjct: 128 QADPGSGCPLTMTFASVPALKLQPDLAEIWLPKVLSTEYDPRNVGIAHKNGATIGMAMTE 187 Query: 205 KRG 207 K+G Sbjct: 188 KQG 190 >gi|299067968|emb|CBJ39182.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CMR15] Length = 595 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 51/342 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T + + + PK+ S E+ T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257 D+ + ++ + ++DG Y ++G K F+S+ +SD I L A +G + F+ Sbjct: 174 DLGILRTKAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKG-ISLFV 232 Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ + D G+P NG+ +++K+G NAT + G+++G+ N + M Sbjct: 233 VPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKGLNAMFVM 292 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------V 354 L + + V+ + YA+ R +SG D+P + Sbjct: 293 MNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLL 352 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +RA A+ A AL S + R E A ++ P+ K + A E Sbjct: 353 TQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNE 412 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 413 GMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG 454 >gi|315499620|ref|YP_004088423.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] gi|315417632|gb|ADU14272.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] Length = 594 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 63/385 (16%) Query: 133 HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAP 190 H + A ++ + M P +T ++ AL T + + PK+ + E+ T Sbjct: 106 HVVATAYSEMLTGASSAFAMYPGLTDGAVAALSVGGTDELKALYLPKLIAGEWSGT---- 161 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIM 245 + LTE GTD+ + S+ SDG Y +SG K ++S+ D ++ Sbjct: 162 ---------MNLTEPHCGTDLGLLRSKAVPDSDGTYKISGQKIWISAGEHDFTGNICHLV 212 Query: 246 LAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNT 294 LA++EG + FLVP+ + D G+P N L L++K+G N+T + + + Sbjct: 213 LARIEGAPAGVKGISLFLVPKFIPDANGNPGERNSLHCAGLEHKMGIHGNSTCVMIYEDA 272 Query: 295 FGFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAEAIHYA---------RRRHV 344 G+LLG+ + E +KI+ Y+ ++A + V +++ A H A + R + Sbjct: 273 KGWLLGNAH------EGLKIMFYMMNNARLGVGLQGLAIGHASHVAAVEFAKDRLQGRAL 326 Query: 345 SGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +G D+P + RA+ + AL LA ++ +R + Sbjct: 327 TGPKSPDKPADSILVHPDVRRMLLESRALLEGGRGFLTWVALQADLAKYAEDEATREKAN 386 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + ++ P+ K + + V ++M+ GGSG+ E +++ R+ I G+ Sbjct: 387 DFLSLLTPVVKAYLTEKGLKVTQDSMQVHGGSGFTEHFPASQYMRDIRITLIYEGTNGVQ 446 Query: 451 VLDVLN--LLEKGTNLFEQLFSTLE 473 LD++ L KG F+ ++ Sbjct: 447 ALDLVGRKLPSKGGRAVMAYFAEID 471 >gi|83952431|ref|ZP_00961162.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] gi|83836104|gb|EAP75402.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] Length = 569 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 50/336 (14%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 +SP +T + AL + + + + PK+ S ++ T + LTE G+ Sbjct: 124 LSPLMTQGQIEALEHHASDEIKEVYLPKLVSGDWAGT-------------MNLTEAHAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ A+ ++ + DG Y ++G K F+S +D ++LA++ G + F+V Sbjct: 171 DVGALRTKAEPQGDGSYAVTGQKIFISWGDNDITENVCHLVLARLPGAPEGTKGISLFMV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G N L L++K+G + T ++F G+L+G+ G ++ M Sbjct: 231 PKYIPDEAGNPGQANDLRVVSLEHKLGLHGSPTAVMQFDGARGWLIGE---EGGGMKAM- 286 Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSG------GILIDQPVMKRAIADI 362 +++A + V G + +AEA + YA R V G +I ++R +A++ Sbjct: 287 -FTMMNNARLGVGGQGIGVAEAACQTALAYAEER-VQGRSAGPEKAIIGHADVRRMLAEM 344 Query: 363 ALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D AA +++ A + D A ++ AA A + PI K + + V ++ G Sbjct: 345 RADTFAARSIALACAVAIDMAHATGGADWAARAAFLTPIAKAFGTETGMRVAELGVQVHG 404 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 G G+IEE A++ R+ +I G+ +D++ Sbjct: 405 GMGFIEETGAAQYSRDVRVTAIYEGTNGIQAMDLVG 440 >gi|86751704|ref|YP_488200.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86574732|gb|ABD09289.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 596 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 34/291 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + GTD+ + ++ K +DG Y ++G K F+S+ D ++LA++EG Sbjct: 163 MNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPA 222 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP++L + G+ NG+ +++K+G NAT + + + G+L+G+ N Sbjct: 223 GIKGVSLFVVPKILVNADGSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEEN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP------ 353 + M L A+ ++ V+ A+ YAR R +SG D+P Sbjct: 283 KGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIV 342 Query: 354 --------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 + RA + A + TAL +A+ D+AK R + +M P+ K Sbjct: 343 HPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGVLT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + A + GG GYI + + R++ I G+ LD++ Sbjct: 403 DVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|34499271|ref|NP_903486.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34105122|gb|AAQ61478.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 593 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/303 (26%), Positives = 139/303 (45%), Gaps = 37/303 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIM 245 PM + G + LTE + G+D+A + ++ +DG Y +SG K F++ M++ + Sbjct: 149 PMMASGQWTGTMNLTEPQAGSDLAQVRTKAAPAADGSYRVSGQKIFITWGEHDMAENIVH 208 Query: 246 L---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF 291 L A V+G + F+VP+ L + G+ N + L++K+G + T + F Sbjct: 209 LVLARLPDAPAGVKG-ISLFIVPKFLVNADGSLGARNDVRCVSLEHKLGIHGSPTAVMSF 267 Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS--- 345 + G+L+G+ N + M L I V+ + +A+ YAR R S Sbjct: 268 GDNDGAVGYLVGEPNKGLNYMFTMMNHARLGVGIEGVAVSERAYQKAVEYARDRVQSRAI 327 Query: 346 ------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----- 394 G +I P ++R + + I A AL+F A + D A A AR Sbjct: 328 GSPDPAGVAIIRHPDVRRMLMTMRAQIEAQRALTFYAAAALDRAARHPVAAEAARNQALL 387 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 + PI K W + A + + A++ GG GYIEE +A++YR++ +I G+ LD Sbjct: 388 NFLIPIVKGWNTEQANEITSLAVQVHGGMGYIEETGVAQYYRDARITAIYEGTTGIQALD 447 Query: 454 VLN 456 ++ Sbjct: 448 LIG 450 >gi|5107394|gb|AAD40109.1| ZmaE [Bacillus cereus] Length = 382 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 94 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRQTDAVIETT 309 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 310 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361 >gi|72384174|ref|YP_293528.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72123517|gb|AAZ65671.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 594 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPMLTDGAIEALLTAGSDEQKATFLPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNSARFAVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVKRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + A +A A +A++ +A R E A + P+ K W +++ V Sbjct: 348 LMTMRGLVEGARSVAYVAAAICDVAHNHPDAAVRKESQAVYEFLVPVVKGWSTELSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A+HYR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDARILTIYEGT 441 >gi|116327188|ref|YP_796908.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116119932|gb|ABJ77975.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 570 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 69/396 (17%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KVEF P L+ + I G+ + R + + K + ++ + Sbjct: 85 KVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIPWTVKSFISEIFYRVDTSLA-IAIGC 143 Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 V A ++ T + ++W PK+ + ++ +GLTE G+D++ + Sbjct: 144 VNLAEILEHHATREMKEEWIPKLAAGKF-------------VCAMGLTEPDHGSDLSNLR 190 Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS----DAFIMLAQVEGRVGC-------FLVPRLLED 264 ++ K +G + L+G K F++ A ++ G++G FLV Sbjct: 191 TKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLTLARSGKIGSGARGLSLFLV------ 244 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDS 320 + ++ K+G + T E+ F N+ G L+G+ E + ++ Y L+ Sbjct: 245 -QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGE--------EGLGLVKYTMGILNG 295 Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A M ++ LA EA+ Y + R G LI+ P +K+ I I ++ A L+ Sbjct: 296 ARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIEREMYAMRCLTLE 355 Query: 376 LANSFDEAKSRS----EEAAYAR----------------IMAPITKYWCCKMAPAVIAEA 415 + D R+ ++ A R I+ PI+K++C + V+++A Sbjct: 356 GSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFYCSETCLKVVSDA 415 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ GGSGY E+ I+R YR++ +I G+ + Sbjct: 416 LQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQI 451 >gi|84499506|ref|ZP_00997794.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis HTCC2597] gi|84392650|gb|EAQ04861.1| acyl-CoA dehydrogenase family protein [Oceanicola batsensis HTCC2597] Length = 592 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 148/338 (43%), Gaps = 45/338 (13%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T + A+ T + + PK+ S E+ T + LTE G Sbjct: 123 MMYPGLTHGAYSAIHAHGTDAQKQTYLPKMVSCEWTGT-------------MNLTEPHCG 169 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG------RVGCFL 257 TD+ + ++ + DG Y ++G K F+S+ MS+ I +LA++ G V F+ Sbjct: 170 TDLGLMRTRAEPQDDGSYAITGQKIFISAGDHDMSENVIHLVLAKIPGGPEGIKGVSLFI 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L +D +P N + +++ K+G NAT + + G+LLG+ + + M Sbjct: 230 VPKFLVKDDNTPGDRNAVSVGKVEEKMGIHGNATCVMNYDGATGYLLGEEHKGMRAMFTM 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG--------ILIDQPVMKRAIA 360 L A+ +S V+ A+ YA+ R V+G LI P ++R++ Sbjct: 290 MNEARLGVAMQGLSQATVAYENALAYAKDRLQGRAVTGAENPDGPADPLIVHPDIRRSLM 349 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMEC 418 D + A A A+ D + ++ A +M P+ K + + A + Sbjct: 350 DQKSFVEGARAFGLWSASLIDRSHRMGDDQAEGLVSLMTPVLKGFLTDQGFDMTVLAQQI 409 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GYIEE +++ R++ I G+ LD++ Sbjct: 410 YGGHGYIEEWGMSQFTRDARIAMIYEGANGIQALDLVG 447 >gi|94309330|ref|YP_582540.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93353182|gb|ABF07271.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 595 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/374 (23%), Positives = 160/374 (42%), Gaps = 64/374 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP + + + PK+ S + T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVG------CFLV 258 D+ + S+ + +DG Y ++G K F+S+ D ++LA++ G F+V Sbjct: 174 DLGILRSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVV 233 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+P NG+ +++K+G NAT + G+++G+ N Sbjct: 234 PKFIPDANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353 + + +++A + V + L E ++ YA+ R ++G D+P Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSLAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVR 348 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + ++A A+ A TAL S + R E ++ P+ K + A Sbjct: 349 RMLLTQKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFT 408 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465 E M+ GG GYI E + ++ R++ N I G+ LD+L L + G L F Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAF 468 Query: 466 EQLFSTLEQDLGSS 479 ++ T ++ G+S Sbjct: 469 GKIVQTFVEEEGTS 482 >gi|220925085|ref|YP_002500387.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949692|gb|ACL60084.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 597 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/387 (23%), Positives = 163/387 (42%), Gaps = 75/387 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T +M AL+ + + + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAMAALLVHGSAEQKRTFLPKMTEGVWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y ++G K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGLLKTRAVPNPDGSYSITGTKIFISAGEHDLSENIIHLVLARIEGAPAGTKGISLFVV 232 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+LL DGS NG+ ++ K+G +NAT + + G+LLG+ N Sbjct: 233 PKLLVKADGSLAERNGVSCGSIEQKMGIHANATCVMNYDGARGWLLGEANRGLN-----A 287 Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGGILIDQP----------- 353 + + ++ A ++V + L+EA + YA+ R ++G DQP Sbjct: 288 MFVMMNEARLAVGIQGLGLSEAAYQNAVAYAKDRLQGRALTGAQAPDQPADPIIVHPDVR 347 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + RA + A + TAL +A+ + R + +M P+ K A Sbjct: 348 RTLLSIRAFNEAARALVMWTALQADVAHRATDPAERQAAEDHLGLMTPVVKGVLTDRGFA 407 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 EA + GG GYIEE +++ R++ I G+ +D++ Sbjct: 408 NAVEAQQVFGGHGYIEESGMSQFVRDARIAQIYEGANGIQAMDLVG-------------R 454 Query: 471 TLEQDLGSSGKKVITILRDSISLCKED 497 L +D G+ ++ L++ + C+E+ Sbjct: 455 KLPRD---GGRAMMRFLQEVETFCREN 478 >gi|116332160|ref|YP_801878.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125849|gb|ABJ77120.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 570 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 69/396 (17%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KVEF P L+ + I G+ + R + + K + ++ + Sbjct: 85 KVEFPPKMLELVSKVIEAGVQAYGFSRKYGELGIPWTVKSFISEIFYRVDTSLA-IAIGC 143 Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 V A ++ T + ++W PK+ + ++ +GLTE G+D++ + Sbjct: 144 VNLAEILEHHATREMKEEWIPKLAAGKF-------------VCAMGLTEPDHGSDLSNLR 190 Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS----DAFIMLAQVEGRVGC-------FLVPRLLED 264 ++ K +G + L+G K F++ A ++ G++G FLV Sbjct: 191 TKATKDKNGNWVLNGTKRFITHGCGFGDIPAILLTLARSGKIGSGARGLSLFLV------ 244 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDS 320 + ++ K+G + T E+ F N+ G L+G+ E + ++ Y L+ Sbjct: 245 -QSKNVQIAGIERKLGLHCSPTCEVVFENSPGLLIGE--------EGLGLVKYTMGMLNG 295 Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A M ++ LA EA+ Y + R G LI+ P +K+ I I ++ A L+ Sbjct: 296 ARMGIAQQSTGLATAAYYEALKYTKERIQFGKPLIEIPAVKKIIDRIEREMYAMRCLTLE 355 Query: 376 LANSFDEAKSRS----EEAAYAR----------------IMAPITKYWCCKMAPAVIAEA 415 + D R+ ++ A R I+ PI+K++C + V+++A Sbjct: 356 GSRVMDRYYWRTFRLKKQGATEREAKNDIVVHYWEKIADILTPISKFYCSETCLKVVSDA 415 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ GGSGY E+ I+R YR++ +I G+ + Sbjct: 416 LQIHGGSGYTEDYDISRIYRDARITTIYDGTSQIQI 451 >gi|228921920|ref|ZP_04085232.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229070975|ref|ZP_04204202.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185] gi|228712157|gb|EEL64105.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus F65185] gi|228837752|gb|EEM83081.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 347 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 59 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 168 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 221 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326 >gi|16950563|gb|AAL32268.1| putative acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki] Length = 309 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 21 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 75 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 76 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 130 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 131 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 182 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 183 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 236 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 237 IAKYFASKMAMKVATNAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 288 >gi|90422257|ref|YP_530627.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90104271|gb|ABD86308.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 596 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M +T + AL+ R + + PK+ + E+ T + LTE + GT Sbjct: 126 MYHGLTMGATAALLVHGRPEQKAIFIPKMVTGEWTGT-------------MNLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ K +DG Y ++G K F+S+ D ++LA++EG V F+V Sbjct: 173 DLGLLRTKAIKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P++L + G NG+ +++K+G NAT + + + G+L+G+ N + M Sbjct: 233 PKILVNADGSLGGRNGVTCGAIEHKMGIHGNATCVMNYDDATGWLIGEENKGMQGMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355 L A+ ++ V+ A+ YA+ R ++G D+P + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVIYAQERLQGRSLTGAKATDKPADPIIVHPDIRRTLLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A + TAL +A+ ++AK R + +M P+ K + A A Sbjct: 353 IRAFNEAARAMVVWTALKGDVAHRSEDAKERQAADDHMGLMTPVLKGVLTDVGFANAVSA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI + + + R++ I G+ LD++ Sbjct: 413 QQVWGGHGYIADNGMEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|229182035|ref|ZP_04309331.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W] gi|228601450|gb|EEK58975.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus 172560W] Length = 347 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 59 KRWGTEEQKRKWLP----KMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 168 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 221 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326 >gi|83721478|ref|YP_441121.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|167579871|ref|ZP_02372745.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis TXDOH] gi|257140217|ref|ZP_05588479.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|83655303|gb|ABC39366.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis E264] Length = 595 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R ++G D+P ++R + A A ++ A Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A S ++EA ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454 >gi|40788122|emb|CAD60270.1| putative feruloyl-CoA dehydrogenase [Pseudomonas fluorescens] Length = 584 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 49/350 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 P + + + P I S PT + LTE R +D+ + + + +DG Y Sbjct: 143 APWLQERYLPAIISGASLPT-------------MCLTEPRLASDVGLLRCRAEPQADGSY 189 Query: 227 CLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCYQRL 275 LSG K F+S D ++LA++ EG G FLVP+ LE G NG+ + Sbjct: 190 RLSGSKLFISGGEHDLTDNILHLVLARLPDAPEGSRGISLFLVPKRLEQGQDNGVRCNGI 249 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 ++K+G + +AT L F G+L+G+ N + M L + + + + A Sbjct: 250 EHKMGIKGSATCSLVFDAAQGWLVGEANRGLAAMFVMMNSARLHVGLQGLGHVEAAWQNA 309 Query: 336 IHYARRRHV-------SGGI------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + YA R +GG + P M+R + ++ A+ + A+ D+ Sbjct: 310 LAYAGERQQMRAPLRPAGGAAQAADPIRYHPAMRRVLLELRATSEGLRAIGYWAAHLLDQ 369 Query: 383 AK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ +R + A+++ PI K + + + A++ GG GY+ E +I + R+ Sbjct: 370 AEHHPEPLARRQADQLAQLLTPIIKAFFTEQGFRQASNALQVFGGYGYVAEFAIEQTLRD 429 Query: 437 SPANSILLGSGNAMVLDVL--NLLEKGTN----LFEQLFSTLEQDLGSSG 480 S I GS D+L +L G L EQL EQ +G Sbjct: 430 SRIAMIYEGSNEIQANDLLLRKVLGDGGQGFALLLEQLRDEAEQGAAVAG 479 >gi|226227951|ref|YP_002762057.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] gi|226091142|dbj|BAH39587.1| putative acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] Length = 596 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 48/317 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ IT++ +DG Y ++G K F+S+ D ++LA++ G Sbjct: 164 LTEAHAGTDLGIITTKAVPAADGTYAITGQKIFISAGEHDLTENIVHLVLARLPDAPSGT 223 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G FLVP+ L G+ N + +++K+G +++AT L+F N G+++G+ + Sbjct: 224 KGISLFLVPKFLPTADGGVGARNAVTCGSVEHKMGIKASATCVLDFDNATGWMVGEAH-- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------------HVSG 346 + M+ + + ++SA ++V + L+E A+ YA+ R V+ Sbjct: 282 ----KGMRAMFVMMNSARLAVGLQGLGLSEVAYQNALAYAKERLQGRSLTGPKNAGGVAD 337 Query: 347 GILIDQPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 IL+ V K +A+ + +A A + L + +A R + ++M P+ K Sbjct: 338 PILVHPDVRKGLLRIKALNEGMRSLAYAVGIRIDLEHRHPDAAVRQDAEDMVQLMTPVIK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459 + A++ +GG GYI+E I ++ R++ I G+ LD++ L Sbjct: 398 AFLTDKGFDNTNIALQTLGGHGYIKEYGIEQYVRDARIAQIYEGTNAVQALDLVGRKLPM 457 Query: 460 KGTNLFEQLFSTLEQDL 476 +G L + F ++ D+ Sbjct: 458 EGGRLVRRFFELVKADV 474 >gi|206972798|ref|ZP_03233720.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134] gi|206731682|gb|EDZ48882.1| acyl-CoA dehydrogenase domain protein [Bacillus cereus AH1134] Length = 382 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 94 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 309 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 310 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361 >gi|226357335|ref|YP_002787075.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226319325|gb|ACO47321.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 611 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL + + + + PKI S E+ T + LTE GT Sbjct: 130 MYPGLSHGAYSALHAVGSDELKNLYLPKIVSGEWTGT-------------MCLTEPHAGT 176 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ I ++ DG Y ++G K F+S+ M+D + +LA++EG + F+V Sbjct: 177 DLGMIRTRATDNGDGSYSVTGTKIFISAGEHDMADNIVHLVLARLEGSPEGTKGISLFVV 236 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G NG+ L++K+G NAT L F G+L+G++N + M Sbjct: 237 PKFVPSAEGGVGERNGVVCGSLEHKMGIHGNATAVLNFDGAKGWLVGEVNKGMNHMFIMM 296 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVS---GGILIDQPVMKRAIADIA 363 L + + + + A+ YA+ R VS +I P ++R + Sbjct: 297 NAARLGTGLQGLGLGEGAYQNALVYAKDRIQMRHTPRVSSEPADPIIVHPDVRRMLLTGK 356 Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A AL+ LA S D + R E A ++ PI K + V ++ + Sbjct: 357 AYTEAGRALAMWLALSIDTEHHHPDEARRKEAADLVALLTPIAKAFMTDNGFHVAVQSQQ 416 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474 GG GYI+E + + R++ I G+ LD+L +L G ++L TL++ Sbjct: 417 IYGGHGYIQEWGMEQFVRDARIGQIYEGTNGIQALDLLGRKVLMDGGKKLQKLAGTLQE 475 >gi|152980951|ref|YP_001354781.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium sp. Marseille] gi|151281028|gb|ABR89438.1| acyl-CoA dehydrogenase oxidoreductase protein [Janthinobacterium sp. Marseille] Length = 596 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 50/328 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE + GTD+ + S+ + +DG Y ++G K Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAQCGTDLGLLRSKAEPQADGSYKITGSKI 198 Query: 234 FLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277 F+S+ D ++LA++ EG G F+VP+ L D G+ N + L+ Sbjct: 199 FISAGEHDMAANILHLVLARLPDAPEGTKGISLFIVPKFLPDAAGKLGARNPIFCGALEE 258 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT ++ G+L+G+ N + M L + S+ V+ A+ Sbjct: 259 KMGIHGNATCQMNIDGATGWLIGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNALV 318 Query: 338 YARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA+ R ++G D+P ++R + A S +A D+ + Sbjct: 319 YAKDRLQMRSLTGPKATDKPADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVALQIDKELN 378 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +EA A ++ PI K + +EAM+ GG G+I E + ++ R+S Sbjct: 379 HPDEAVRAEAVDEVALLTPIIKAFLTDNGWISTSEAMQVYGGHGFISEWGMEQYVRDSRI 438 Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464 N I G+ LD+L LL+ G L Sbjct: 439 NMIYEGTNTIQSLDLLGRKILLDNGAKL 466 >gi|323507642|emb|CBQ67513.1| conserved hypothetical protein [Sporisorium reilianum] Length = 651 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 21/295 (7%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKI-------SDGIYCLSGHKWFLSSPMSDAFIM 245 +T+ G +TE+ GG+D++ + + + + + +SG KWF S+ D + Sbjct: 186 RTAWTAGQWMTERPGGSDVSRTETVAKPLNPNKKPEAGDAFVISGFKWFSSATDGDIALA 245 Query: 246 LAQVE-----GRVGCFLVPRLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 LA+ G G L + D G NG+ RLK K+G + T ELE G Sbjct: 246 LARTSDDLTLGSKGLSLFLIKIRDDRTGKLNGIRVHRLKRKLGTKYLPTAELELDGCIGE 305 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMK 356 L+G+L + + + L SA +V + L A YA+ R GG +D+ P+ Sbjct: 306 LVGELGRGVATISSVLNITRLYSAGGAVGALSWGLRSATAYAQIRPALGGGKLDRLPLHT 365 Query: 357 RAIADIALDIAAATALSFR---LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + + + + F L + + ++ + R++ P K + A Sbjct: 366 DQLLKVTVTYRVFLQIFFSNVLLMGASEAGQASKRDQTRLRLLTPALKAFVATRASESYL 425 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFE 466 +E GG GY+EE +A R+ I G+ + LDVL +L KG L E Sbjct: 426 TLIESFGGQGYMEEVGMAEMLRDGTVERIWEGTPAILSLDVLRVLVQSKGQALLE 480 >gi|301166975|emb|CBW26554.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ] Length = 585 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 54/333 (16%) Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPM-QKTSV 196 L L+AQL L S++ +A T+ +H+ F E PM + + Sbjct: 120 LMLLAQLSRACL-----ASSTQMAFFTSIGEMIHR------FCDEETAQRLVPMIARGEI 168 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---- 252 + + LTE G+D+ I + DG Y L+G K F+++ +LA+++G Sbjct: 169 SGSMCLTEPGCGSDLGMIKTSATPTEDGKYLLNGSKIFITNGGGGLGFVLARIKGDKEGL 228 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + FL + + + GL Y KN K+G + T E+ + N+ L+G+ Sbjct: 229 AGISMFLCEQNIPE--KEGLNYSIAKNEEKMGMHGSFTTEVVYENSVATLVGEAG----- 281 Query: 309 VEDMKILIYLDSAIMSVSGMRV------SLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + K +++L + GM+ S+ AI YA R G L + P+MKR + D Sbjct: 282 -KGFKYMLHLMNEARIAVGMQALGTIEGSIGYAISYASEREQFGKPLTELPLMKRNLEDF 340 Query: 363 ALDIAAATAL------SFRLANSFDEAKSRSEEAA------------YARIMAPITKYWC 404 + A AL + + D K +S + + + R P+ KY+ Sbjct: 341 TTERDALRALLVDTISHYDIFQRLDLKKQKSGDLSKEEEELLKESSLWTRKRTPLVKYYA 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 C+ A + A++ +GG G++EE + R++R+S Sbjct: 401 CEQATLLSQRAIQVLGGYGFMEEYPVERYHRDS 433 >gi|296140757|ref|YP_003648000.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296028891|gb|ADG79661.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 387 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 MV + ++W PK+ APM + LTE G+D A++T++ ++ Sbjct: 97 MVDTYGSQEQRQEWIPKL----------APM---DIMASYCLTEPGAGSDAASLTTKAER 143 Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 D + L+G K F+S SD ++++A+ EG + L++ G+P GL + + K+ Sbjct: 144 DGDD-FVLNGTKQFISGGGASDLYVVMARSEGEGARGISTFLVDKGTP-GLSFGPAEVKM 201 Query: 280 GNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 G S T ++ F N FG + LN L+ A Sbjct: 202 GWHSQPTTQVIFENVRIPASRMLGGPEGAGKGFGIAMNGLNGGR-----------LNIAA 250 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+ G + + A+ Y R G LID+P ++ +AD+A + AA + +R A + DE Sbjct: 251 CSMGGAQAAYDLALQYMTERETFGRKLIDEPTIRFTLADMATSLEAARLILWRAATALDE 310 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 E + + K + + V +A++ GG GY+ E + + R+ N I Sbjct: 311 NDPDKVE------LCAMAKKFVTETCFQVADQALQLHGGYGYLHETGVEKIVRDLRVNRI 364 Query: 443 LLGSGNAM 450 L G+ M Sbjct: 365 LEGTNEIM 372 >gi|167835477|ref|ZP_02462360.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis MSMB43] Length = 595 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVINLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R ++G D+P ++R + A A ++ A Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A S ++EA ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454 >gi|167585485|ref|ZP_02377873.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 595 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 47/322 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453 >gi|73540152|ref|YP_294672.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72117565|gb|AAZ59828.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 595 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/394 (22%), Positives = 160/394 (40%), Gaps = 80/394 (20%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP + + + PK+ + E+ T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQAYLPKLVTGEWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLV 258 D+ + ++ + DG Y L+G K F+S+ M++ I L Q + F+V Sbjct: 174 DLGILRTKAEPQPDGSYLLTGTKIFISAGEHDMAENIIHLVLARLPDAPQGTKGISLFVV 233 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+P NG+ +++K+G NAT + G+L+G+ N Sbjct: 234 PKFIPDASGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWLVGEANKGLN-----A 288 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353 + + +++A + V + L E ++ YA+ R ++G D+P Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVR 348 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + ++A A+ + TAL S + R + ++ P+ K + A Sbjct: 349 RMLLTQKAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-------------- 456 E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLGRKILGDMGAKMKAF 468 Query: 457 -------LLEKGTNLFEQLFSTLEQDLGSSGKKV 483 + E+GTN Q F DLG +K+ Sbjct: 469 GKIVQAFVEEEGTNEAMQEFVNPLADLGDKVQKL 502 >gi|127513796|ref|YP_001094993.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella loihica PV-4] gi|126639091|gb|ABO24734.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4] Length = 602 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 44/306 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244 PMQ+ A + +TE G+ +A IT++ +DG Y ++G K F+S +++ I Sbjct: 152 PMQEGRFAGTMAMTEPGQGSALADITTKAVPQADGSYLITGQKMFISGGDQSITENIIHM 211 Query: 245 MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN 293 LA++EG + F+VP+ L +DGS N + L +K+G R+ + L F Sbjct: 212 TLAKIEGAPAGVKGISLFIVPKFLVNDDGSQGERNDVALAGLLHKMGFRNTTSTVLSFGE 271 Query: 294 ---TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-- 344 G+L+G+ + + M +I + +A++ G SL YAR R Sbjct: 272 KGGAVGYLVGEPHKGLAYMFQMMNEARIFVGSTAAVLGYQGFNASL----EYARERPQGR 327 Query: 345 --------SGGILIDQP-------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 S I I Q + ++A + +L + + F +++ D ++R + Sbjct: 328 LPSNKDPESKQIPIVQHADVRRMLLAQKAYVEGSLALCLYASSLFEDSHTADTPEARQQA 387 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 ++ PI K W K A A++ +GGSGYI E + ++YR++ N I G+ Sbjct: 388 FMLLDLLTPIVKSWPSKYALKANDLAIQVLGGSGYIREYPVEQYYRDNRLNPIHEGTEAI 447 Query: 450 MVLDVL 455 LD+L Sbjct: 448 HGLDIL 453 >gi|161523758|ref|YP_001578770.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351481|ref|YP_001947109.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] gi|221200078|ref|ZP_03573121.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2M] gi|221206769|ref|ZP_03579781.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2] gi|221211260|ref|ZP_03584239.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD1] gi|160341187|gb|ABX14273.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189335503|dbj|BAG44573.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] gi|221168621|gb|EEE01089.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD1] gi|221173424|gb|EEE05859.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2] gi|221180317|gb|EEE12721.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2M] Length = 595 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 60/373 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 144 SPELQKAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGL 270 ++G K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 191 SITGTKIFISSGEHDMASNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGI 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+++G+ N + M L + + V Sbjct: 251 KCGSIEHKMGIHGNATCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310 Query: 331 SLAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATAL 372 + ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 311 AYQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 S + R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 QIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 + R++ N I G+ + LD+L G D+G+ KK I+ D + Sbjct: 431 YVRDARINMIYEGTNSIQSLDLLGRKVLG-------------DMGAKLKKFGKIVSDFVE 477 Query: 493 LCKEDKGLARFLT 505 +A F+ Sbjct: 478 AEGVKPEMAEFVN 490 >gi|319785585|ref|YP_004145061.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171473|gb|ADV15011.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 596 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 75/412 (18%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++T T W P++ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKATWLPRMIEGAWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ MSD + +LA++EG + F+ Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHDMSDNIVHLVLARIEGAPEGVKGISLFI 231 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+L D G+ N + ++ K+G N+T + + G LLG+ N + M Sbjct: 232 VPKLKLDPSGNPGNRNTVSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEPNGGLKAMFTM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKR--- 357 L + +S ++ A+ YA+ R +SG +I P ++R Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVGYAKDRLQGRSLSGPKAPDKKADPIIVHPDIRRSLM 351 Query: 358 ---AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 A + +A TA+ +A+ + K R Y +M P+ K Sbjct: 352 TMKAFNEAGRALALWTAIKSDIAHRSGDDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE +++ R++ I G+ LD++ + Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 LG G+ V ++ C+E++ EK+A + A + G+ND+ Sbjct: 455 KLGLHGGRAVQAFFKEVGEFCEENRA-----NEKMAPFTKA---LKKGLNDL 498 >gi|295699088|ref|YP_003606981.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295438301|gb|ADG17470.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 600 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEELKQRYVPKMISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++ + ++ + DG Y +SG K F++ D ++LA+ EG G F+V Sbjct: 171 DLSLVRTRAEPQGDGSYRISGTKIFITWGEHDMTENIVHLVLARTPSAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358 M I++ + V G+ +S +A+ YA+ R V G +I P ++R Sbjct: 288 YMFIMMNAARFAVGVQGVAISDRAYQQAVAYAKERVQGRPVDGSAKQSVAIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ + A AL++ LA+ + +R+ A + PI K W +M+ V Sbjct: 348 LSTMRALTEGARALAYVSASHCDLAHRHPDRATRANHQAIYEYLVPIVKGWSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|229192908|ref|ZP_04319865.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876] gi|228590518|gb|EEK48380.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus cereus ATCC 10876] Length = 347 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 59 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 113 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 114 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMKGVSTNKMSKLLASNSSHIAEIH 168 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 169 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 220 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 221 SRRRKQGNRYICEYEAIQTILAEASVNIKAARSL------CQEAGKKRQDRHTDAVIETT 274 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 275 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 326 >gi|163736082|ref|ZP_02143501.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] gi|161389952|gb|EDQ14302.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] Length = 593 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 66/398 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPR-LLEDG 265 + DG Y ++G K F+SS M+D I +LA++ G V F+VP+ +++DG Sbjct: 179 AEPQDDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKDG 238 Query: 266 SP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 NG+ +++ K+G N+T + + + G+LLG + + M L Sbjct: 239 GSLGDRNGVSVGKIEEKMGIHGNSTCVMNYDSATGYLLGTEHKGMRAMFTMMNEARLGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369 + ++ + A+ YA+ R V+G LI P ++R + D A Sbjct: 299 MQGLAQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D+A ++ A I + P+ K + + +A + GG GYIEE Sbjct: 359 RAFILWGAKMIDQAHRAEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 ++++ R++ I G+ LD++ L QD GK V+ Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFF 462 Query: 488 RDSISLCKED----KGLARFLTEKIALAS---SAAALY 518 + CKE+ +G ++ E + AS AA +Y Sbjct: 463 EMVKNFCKENGDISEGYSKEFIEPLKAASKDLQAAGMY 500 >gi|302912925|ref|XP_003050806.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI 77-13-4] gi|256731744|gb|EEU45093.1| hypothetical protein NECHADRAFT_61163 [Nectria haematococca mpVI 77-13-4] Length = 636 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 55/316 (17%) Query: 199 GLGLTEKRGGTDI--------------AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244 G +TE+ GG+D+ A + S+ + I G + ++G KWF S+ S + Sbjct: 191 GQWMTERTGGSDVSLTETTAIYEPTPEAKLASKIENIPLGPWSINGFKWFSSATDSRMTV 250 Query: 245 MLAQV-EGRVGCFLVP-------------RLLEDGSP-NGLCYQRLKNKIGNRSNATVEL 289 +LA+ +G + FL P R +E+G NG+ QRLKNK G +S T EL Sbjct: 251 LLARTAKGGLSTFLAPMRKHDPQATTSTGRPVENGEALNGVRIQRLKNKSGTQSLPTAEL 310 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-- 347 + G+L+G + + L + S++ ++S + L A YAR R + G Sbjct: 311 VLEDMRGWLIGQEGRGIHEISTVLTLTRVHSSVAAMSYVGRGLGIARAYARVREIGAGKG 370 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----------------SRSE 388 LI+ + R +A + + L+ A+ ++ S + Sbjct: 371 ARMKLIESSLHMRTLAKMTSEYRGLMLLTMLTAHVLGVSEHPVDANLPPALAALTPSAKD 430 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI--EER---SIARHYRESPANSIL 443 R++ +TK + CK + ++ ME +GG GY+ EE+ ++AR +R+ I Sbjct: 431 APPLIRVLTQLTKAYVCKASVQLLFSCMESLGGVGYLLNEEQEYLNVARLHRDCAVLPIW 490 Query: 444 LGSGNAMVLDVLNLLE 459 G+ + + D L L+ Sbjct: 491 EGTTDVLSTDFLRALK 506 >gi|187922667|ref|YP_001894309.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187713861|gb|ACD15085.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 595 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ + + T + LTE GTD+ + ++ + SDG Y Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ G + F+VP+ + E G NG+ Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPGAPNGTKGISLFIVPKFVPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+L+G+ N + M L + S+ + Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEI 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++ YA+ R + +I P ++R + AA A S+ A Sbjct: 311 GYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAARAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFESTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|296163804|ref|ZP_06846494.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295885951|gb|EFG65879.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 566 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 115 LCPLLTDGAIEALLTAGSEEQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 161 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 162 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 221 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 222 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 278 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YA+ R S + +I P ++R Sbjct: 279 YMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 338 Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +A + A+ AL++ A D + +R+E A + PI K W +++ V Sbjct: 339 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAEHQAIYEYLVPIVKGWSTELSIDVT 398 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 399 SLGVQVHGGMGFIEETGAAQYYRDA 423 >gi|254480326|ref|ZP_05093574.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214039888|gb|EEB80547.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 391 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 29/265 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 I LG+TE GG+D+A I + + D Y ++G K F+S M ++ A G+ G Sbjct: 134 ISLGITEPSGGSDVAGIQTTAKAEGD-FYIVNGSKTFISGGMGANWVSTAVRTGKAGPKG 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 V LL G+ L K G + T L F N GFL+ N + Sbjct: 193 VSMLLIPMDLAGVSRTPLDKKQGWWCSDTATLYFDNVKVPKKYLMGEEGHGFLVIMHNFN 252 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + E + +++ +++A R L EA+ +A+ R G L D V++ +A + Sbjct: 253 S---ERLAMIVTMEAA------ARCCLEEAVTWAQERKTFGKRLADHQVIRHKVAMMKQK 303 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A A + L +F E + + A ++ A T +C + EA + +GGS Y+ Sbjct: 304 INATQAYALHLTEAFIEGRCHPGDLAMLKVQASETMEFCAR-------EASQILGGSSYL 356 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 + R YRE N+I GS M Sbjct: 357 RGSKVERIYREVRVNAIGGGSEEIM 381 >gi|146339215|ref|YP_001204263.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146192021|emb|CAL76026.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 592 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/362 (22%), Positives = 161/362 (44%), Gaps = 56/362 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249 LTE + G+D+ A+ ++ ++ +DG Y ++G K +++ M+D + A Sbjct: 163 LTEPQAGSDVGALRTRAERAADGTYRIAGSKIYITYGEHDMTDNIVHFVLARLPDAPAGT 222 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 +G + FLVP+ L + G+ N + +++K+G ++ T + + G+L+G+ Sbjct: 223 KG-ISLFLVPKFLVNADGSLGARNDIYATGVEHKLGMHASPTCTMTMGDNGGAIGYLIGE 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352 N + M L + V + +A+ YA+ R + +I Sbjct: 282 ENAGMRCMFTMMNQARLGVGLEGVGVADRAYQQALAYAQERRQGRAVGSKGAGSDAIIAH 341 Query: 353 PVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 P +KR + + + I ATA++ +A + R+E AA ++ PI K + Sbjct: 342 PDVKRMLMQMRSLTAASRSICYATAVALDVAVRAKDPVVRAEAAARGALLTPIAKAFSTD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------------- 453 + V ++ GG G+IEE A+HYR++ +I G+ +D Sbjct: 402 IGNEVAYLGVQIHGGMGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGAS 461 Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513 V LL++ T + ++ ++ + G++G K LRD++ +R+L EK+ A + Sbjct: 462 VFKLLDELTEIVRRVEASNDPAFGTTGTK----LRDALGALDRS---SRWLLEKLGTAPN 514 Query: 514 AA 515 A Sbjct: 515 DA 516 >gi|90418708|ref|ZP_01226619.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90336788|gb|EAS50493.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 637 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 49/389 (12%) Query: 124 FEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181 F+P Q H + A M+ M P +T+ ++ A+ VH S Sbjct: 135 FDPEYGGQGLPHTLATAVSEYMSSANMAFAMYPGLTAGAIAAI----SVHG-------SN 183 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---P 238 E T M S + LTE GTD+ + ++ DG Y +SG K F+S+ Sbjct: 184 EQKQTYLPKMIDGSWTGTMNLTEPHCGTDLGLLRTKAVPQDDGSYRISGQKIFISAGEHD 243 Query: 239 MSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNA 285 M+D + +LA++EG + F+VP+ + DG+P NG+ L+ K+G NA Sbjct: 244 MADNIVHLVLARIEGAPEGVKGISLFIVPKFVLDADGNPGERNGVVCGSLEEKMGIHGNA 303 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR---- 341 T + + + G+L+G+ + + M L + ++ V+ A+ YAR Sbjct: 304 TCVMNYDDATGYLIGEADKGLRAMFTMMNEARLGVGVQGLAISEVAYQNAVTYARERIQG 363 Query: 342 RHVSGGI--------LIDQPVMK------RAIADIALDIAAATALSFRLANSFDEAKSRS 387 R +SG +I P ++ R+I + + TAL L++ DE K R Sbjct: 364 RSLSGAKAPEKKADPIIVHPDIRRILMTIRSINEAGRALVLWTALKGDLSHRADEEKDRQ 423 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 + +M P+ K A + GG GYI E + + R++ I G+ Sbjct: 424 AADDWMGLMTPVIKGVLTDKGFDNAVMAQQVYGGHGYIGEWGMEQFVRDARIAQIYEGAN 483 Query: 448 NAMVLDVLN--LLEKGTNLFEQLFSTLEQ 474 LD++ L G + F+ + Q Sbjct: 484 GIQALDLVGRKLGLNGGRAVQSFFAEVGQ 512 >gi|148252398|ref|YP_001236983.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146404571|gb|ABQ33077.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 596 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/362 (23%), Positives = 149/362 (41%), Gaps = 63/362 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K + PK+ + E+ T + LTE GTD+ + ++ + +DG + +SG Sbjct: 148 KTYVPKMVAGEWTGT-------------MNLTEPHCGTDLGLLRTKAVRQADGSFKISGT 194 Query: 232 KWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRL 275 K F+S+ D ++LA++EG V F+VP+ L + G NG+ + Sbjct: 195 KIFISAGEHDLADNIIHLVLARIEGAPAGIKGVSLFVVPKFLVNPDGSVGQRNGVTCGSI 254 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 ++K+G N+T + + N G+L+G+ N + M L A+ ++ V+ A Sbjct: 255 EHKMGIHGNSTCVMNYDNATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNA 314 Query: 336 IHYARRR-------------HVSGGILIDQPVMK-----RAIADIALDIAAATALSFRLA 377 + YAR R + I++ V + RA + A + T+L +A Sbjct: 315 VAYARERIQGRSLTGPKAPDKAADPIIVHPDVRRTLLSIRAFNEAARAMVVWTSLKSDVA 374 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + + K R + +M P+ K + M A A + GG GYI E + + R++ Sbjct: 375 HRSQDPKDRQAADDHMGLMTPVMKGYMTDMGFANAVAAQQMYGGHGYIAEWGMEQFVRDA 434 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497 I G+ LD++ L +D G+ V+ + S KE Sbjct: 435 RIAMIYEGANGIQALDLVG-------------RKLPRD---GGRAVMAFFNEVGSFAKEQ 478 Query: 498 KG 499 G Sbjct: 479 GG 480 >gi|260574555|ref|ZP_05842559.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] gi|259023451|gb|EEW26743.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] Length = 591 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + GTD+ + ++ + +DG Y ++G K F+S+ D ++LA+ G Sbjct: 161 MNLTEPQCGTDLGLMRTKAEPQADGSYAITGTKIFISAGEHDLAENIIHLVLARAPGGAP 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L + G+ N + ++++K+G +AT + + GFLLGDL+ Sbjct: 221 GIRGVSLFIVPKFLVNPDGSLGARNKVTAGKVEHKMGIHGSATCVMNYDGATGFLLGDLH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351 + M L + + + A+ YAR R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAVAEAAFQNAVAYARERLQGRAVTGDANPAGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R++ D + A A + A+ D ++ + + AA A I + P+ K + Sbjct: 341 HPDIRRSLMDQKSFVEGARAFTLWGAHLIDRSRRQGDAAAEAMISLLTPVIKGFQTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A + GG GYIE +++ R++ I G+ LD++ Sbjct: 401 EMAVAAQQVWGGHGYIEANGMSQFVRDARIAMIYEGANGVQALDLVG 447 >gi|224368635|ref|YP_002602798.1| Acd5 [Desulfobacterium autotrophicum HRM2] gi|223691351|gb|ACN14634.1| Acd5 [Desulfobacterium autotrophicum HRM2] Length = 602 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 41/318 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ +K DG Y ++G+K F++ +++ I +LA+VEG Sbjct: 164 LTEPEAGSDVGALTTSAKKNPDGTYSITGNKIFITGGDHDLAENIIHPVLARVEGAPSGS 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302 + F+VP++ + G N + ++ K+G +AT + N GFLLG Sbjct: 224 KGISIFIVPKIWVNDDKSLGKNNDVQCTGIEEKMGMHGSATCSMSLGSKGNCRGFLLGQE 283 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------- 349 N + M L+ S ++ A+ YA++R + G L Sbjct: 284 NQGLAIMFHMMNEARLNVGFQGSSAASMAYLYALDYAKQR-IQGKALHDMKNPEAKSVPI 342 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYW 403 I P ++R + + + +L F ++N FD + + ++ PI K + Sbjct: 343 IQHPDVRRMLTWMKAHVDGMRSLVFYVSNLFDTQGLFPDTPEGEQAGKLIELLTPIVKAY 402 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKG 461 C + V +A++ GG GYI E + + R+ SI G+ +D+L L G Sbjct: 403 CAQRGFEVCVQAVQVHGGYGYISEFPVEQLVRDVKIASIYEGTDGIQAMDLLARKLGMDG 462 Query: 462 TNLFEQLFSTLEQDLGSS 479 +F L + + + S+ Sbjct: 463 GKVFTGLLEIIGKTIKSA 480 >gi|115387195|ref|XP_001211103.1| predicted protein [Aspergillus terreus NIH2624] gi|114195187|gb|EAU36887.1| predicted protein [Aspergillus terreus NIH2624] Length = 616 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 44/317 (13%) Query: 202 LTEKRGGTDI-----AAITS-----QGQ--KISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 +TE+ GG+D+ A+ S +G+ +I G Y LSG K+F S+ + ++LA+ Sbjct: 165 MTERVGGSDVRNSETIAVYSPLPSKEGRFGRIDQGDYLLSGFKFFSSATDCNVALILAKT 224 Query: 250 EG-RVGCFLVPRLL----EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 E ++ F+ P + EDG NG+ RLKNK G + T ELE + ++G Sbjct: 225 ESSQLSLFVAPTVKTIIGEDGKEKEVTNGIRIHRLKNKFGTKELPTAELELKDVRAHMIG 284 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + + + + I ++S +R ++ A +AR R L P+ R +A Sbjct: 285 PKDRGIATIALLLNVTRTHNFITALSCLRRAMDIAKAFARSRKTIDQPLWTFPMHLRMLA 344 Query: 361 DIALDIAAATALSFRL------------ANSFDE----AKSRSEEAAYARIMAPITKYWC 404 + + L+F AN D AKS R + +K Sbjct: 345 QLEVKHRGWMQLAFFTTSLLSYGDHGFPANVSDHYSLLAKSPELTTLVLRALTSTSKAVI 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEER-----SIARHYRESPANSILLGSGNAMVLDVLNLLE 459 CK A E E +GG GY++E +++R +R++ +NS+ G+ N + + + L Sbjct: 405 CKSATLAFQECQEAMGGVGYMDEPEEPEFNVSRLWRDTASNSVWEGTSNVLASETVRHLT 464 Query: 460 KGTNLFEQLFSTLEQDL 476 +G NL + F T +D+ Sbjct: 465 RGHNL--ESFGTWIRDV 479 >gi|319426357|gb|ADV54431.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200] Length = 585 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ + DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ + GS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + + N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 RH +GG +I ++R + I A ALS D AK +E Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|167617946|ref|ZP_02386577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis Bt4] Length = 595 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKLYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFVPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A S + R E ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKALSHADEVVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454 >gi|120598792|ref|YP_963366.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. W3-18-1] gi|120558885|gb|ABM24812.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1] Length = 585 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ + DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ + GS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + + N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 RH +GG +I ++R + I A ALS D AK +E Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|146293131|ref|YP_001183555.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella putrefaciens CN-32] gi|145564821|gb|ABP75756.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens CN-32] Length = 585 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ + DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ + GS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSLGSTNGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + + N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 RH +GG +I ++R + I A ALS D AK +E Sbjct: 318 RHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|148253980|ref|YP_001238565.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146406153|gb|ABQ34659.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 592 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/362 (23%), Positives = 163/362 (45%), Gaps = 56/362 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249 LTE + G+D+ A+ ++ ++ DG Y ++G K F++ M+D + A Sbjct: 163 LTEPQAGSDVGALRTRAERAPDGSYRITGSKIFITYGDHDMTDNIVHFVLARLPDAPAGT 222 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 +G + FL+P+ L +DGS N + +++K+G ++ T + + G+L+G Sbjct: 223 KG-ISLFLIPKFLVNKDGSLGARNDIYPSGIEHKLGMHASPTCTMTMGDHGGAIGYLIGQ 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352 N + M L + V + +A+ YA+ R + +I Sbjct: 282 ENAGMRCMFTMMNQARLGVGLEGVGVADRAYQQALAYAQDRKQGRAVGSKGSGSDAIIAH 341 Query: 353 PVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 P +KR + + + I ATA++ +A + R+E AA ++ PI K + Sbjct: 342 PDVKRMLMQMRSLTAASRSICYATAVALDVAVRAKDPAVRAEAAARGALLTPIAKAFSTD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------------- 453 + V ++ GG G+IEE A+HYR++ +I G+ +D Sbjct: 402 IGNEVAYLGVQIHGGMGFIEETGAAQHYRDARITAIYEGTNGIQAIDLVTRKLGANGGAS 461 Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513 V LL++ T++ ++ ++ + G++G K LR+++S + +R+L EK+ A + Sbjct: 462 VFKLLDELTDIVRRVEASNDPAFGTTGAK----LREALSALERS---SRWLLEKLGTAPN 514 Query: 514 AA 515 A Sbjct: 515 DA 516 >gi|222147473|ref|YP_002548430.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] gi|221734463|gb|ACM35426.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] Length = 597 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/385 (23%), Positives = 166/385 (43%), Gaps = 67/385 (17%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ T + + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILAHGTDQQKQTYLPKMVEGTWSGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ MS+ I +LA++EG + F+ Sbjct: 172 TDLGLLRTKAVPNGDGTYKISGQKIFISAGEHGMSENIIHLVLARIEGAPEGTKGISLFI 231 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+++ EDG+ NG+ +++K+G NAT + + G+L+G N + M Sbjct: 232 VPKVIVGEDGALGAKNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGAENKGLSAMFVM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIA 360 L + +S ++ A+ YAR R +SG D+ P ++RA+ Sbjct: 292 MNEARLGVGLQGLSIAEIAYQNAVTYARERIQGRSLSGAKAPDKTADPIIVHPDIRRALM 351 Query: 361 DI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 I A + A TAL +A+ +A + +M PI K Sbjct: 352 TIKAFNEAGRAFTLWTALKSDIAHRAGDAAEKQTADDILGLMTPILKGVLTDKGFDHAVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE ++++ R++ I G+ LD++ + Sbjct: 412 AQQVYGGHGYIEEWGMSQYVRDARIAMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLGSSGKKVITILRDSI-SLCKEDK 498 LG +G + + L + I + C+E++ Sbjct: 455 KLGLNGGRAVMALFNEIGAFCEENR 479 >gi|167561592|ref|ZP_02354508.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis EO147] gi|167568828|ref|ZP_02361702.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis C6786] Length = 595 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ + E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQKVYLPKLVAGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDFSKNIVHLVLARLPDAPKGTKGISLFIVPKFIPDASGEPGERNGVK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G NAT + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNATCVMNLDNAKGWMIGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANS 379 ++ YA+ R ++G D+P ++R + A A ++ A Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 380 FDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A S ++EA ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKALSHADEAVRKEAEDLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSVQALDLLG 454 >gi|322796936|gb|EFZ19288.1| hypothetical protein SINV_12082 [Solenopsis invicta] Length = 401 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ K++ +Y ++G K W + + A ++ A + + Sbjct: 142 LSEPGNGSDAGAASTTA-KLNGSVYTINGTKSWITNGFEASAIVLFATTDKSKKHKGISA 200 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 +L D GL + ++K+G R ++T L F + + N P KI ++ LD Sbjct: 201 ILVDSPTAGLSLGKKEDKLGIRGSSTCSLIFEDC---QMPQDNTLGKPGMGFKIAMMTLD 257 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++G + +A+A + YA +R G +I +++ IAD+AL + ++ L++ Sbjct: 258 AGRIGIAGQALGIAQASLDCAMDYANKRQAFGQSIIKLQTIQQKIADMALKLESSRLLTW 317 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D K ++EAA A++ A T +C + ++ +GG GY+ + RHY Sbjct: 318 RAAQLKDSGKPYTKEAAMAKLSASETATFCAH-------QCIQILGGMGYVSDMPAERHY 370 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 371 RDARITEIYEGT 382 >gi|167570773|ref|ZP_02363647.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis C6786] Length = 596 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 69/405 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSSYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 +A + A ALS+ A D A ++E A+ + P+ K W +M V Sbjct: 348 LATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 + ++ GG G+IEE A++YR++ +I G+ + +L+ + T Sbjct: 408 SLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKTV--------- 455 Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 +D G+ K ++ +R ++ G A F K LA+ A AL Sbjct: 456 -RDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKTQLANGARAL 498 >gi|320588653|gb|EFX01121.1| acyl-dehydrogenase domain containing protein [Grosmannia clavigera kw1407] Length = 609 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/306 (27%), Positives = 129/306 (42%), Gaps = 64/306 (20%) Query: 199 GLGLTEKRGGTDIA---------AITSQGQKISD------GIYCLSGHKWFLSSPMSDAF 243 G +TE+ GG+D++ T+ G D G + + G KWF S+ + Sbjct: 189 GQWMTERPGGSDVSQTETVATYVGATAGGDDDVDANGDPLGPWAIDGFKWFSSATDAGMA 248 Query: 244 IMLAQVEGRVG--CFLVP--RLLEDGSP------------NGLCYQRLKNKIGNRSNATV 287 I+LA+ G F P R SP NG+ QRLK+K G R T Sbjct: 249 ILLARTHSSKGLSAFFAPMRRRRRASSPATAMAGPNNTELNGVRIQRLKDKFGTRPVPTA 308 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 ELE T +L+G + M + ++ A + ++G + +A+A YA RHVS Sbjct: 309 ELELRGTRAWLIGREGDGIREIATMLAITRVHCSVACLGLAGRALGVAKA--YALVRHVS 366 Query: 346 GG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 GG L P+ R +AD+ + L+ A IM Sbjct: 367 GGPGGRSRMPLYKSPLHMRTLADLTGEYHGMMLLTMYTAY----------------IMGS 410 Query: 399 ITKYWCCKMA-PAVIAEAMECIGGSGYI-----EERSIARHYRESPANSILLGSGNAMVL 452 + K +CCK A P + ME +GG GY+ E ++AR +R+ N+I G+ + + Sbjct: 411 LHKAYCCKQAVPLLHGACMEALGGVGYLLNHETEPLNLARLFRDGCVNAIWEGTTDVLST 470 Query: 453 DVLNLL 458 D+L L Sbjct: 471 DLLRTL 476 >gi|224367888|ref|YP_002602051.1| Acd1 [Desulfobacterium autotrophicum HRM2] gi|223690604|gb|ACN13887.1| Acd1 [Desulfobacterium autotrophicum HRM2] Length = 615 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 43/322 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ K DG Y ++G+K F+++ ++D I +LA++EG Sbjct: 164 LTEPSAGSDLGALTTTATKNDDGTYSITGNKIFITNGEQNLTDNIIHPVLARIEGAPAGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F+VP++ EDGS N + ++ K+G + T L + GFLLG Sbjct: 224 RGISIFIVPKIWVNEDGSFGESNDVVCTGVEEKMGLHGSPTCSLSLGSKGQCRGFLLGKE 283 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LI 350 N + M + L+ + + + A+ YAR R + +I Sbjct: 284 NQGMQIMFHMMNEVRLEVGTQAATHASCAYLYALDYARTRCQGRSLETSRDSSAPQVPII 343 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAY---ARIMAPITKYWC 404 P ++R + + + +L + A D+ A +++E+ Y I+ PI K +C Sbjct: 344 QHPDVRRMLTKMKAHVEGMRSLLYYTAFCIDKGHCADTQAEKDRYQGLTEILTPIVKAYC 403 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 + V +AM+ GG GY E + + R+ SI G+ +D L + KG Sbjct: 404 SERGFDVCVDAMQVFGGYGYTREYPMEQLVRDCKICSIYEGANGIQAMDFLGRKLTMAKG 463 Query: 462 ---TNLFEQLFSTLEQDLGSSG 480 T+L E++ T ++ + + G Sbjct: 464 AFLTSLVEEIKKTGQRAMETEG 485 >gi|295697021|ref|YP_003590259.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295412623|gb|ADG07115.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 381 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 12/255 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE G+D+AAI ++ + DG Y LSG+K F+++ + +D +++ A+ G V Sbjct: 123 LAITEPGAGSDVAAIRTKAVREGDG-YVLSGNKIFITNGVYADFYVVAAKTNPEAGHRGV 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 + D G QR K+G+ ++ T EL F + LLG+ N V Sbjct: 182 SLFIVDRDAPGFHVQRKLEKVGHHASDTAELFFDDCRIPADRLLGEENRGFYLVMQNFQW 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ ++ + +L A+ YA+ R GG L V++ + D+A+++ A L++ Sbjct: 242 ERLMIALQTLGTAQAALDMAVEYAKTRQQFGGPLTQFQVIRHRLVDMAVEVEKARQLTYH 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + + E + A++ A T CK+A EA++ GG GY+ E I R +R Sbjct: 302 ALDLYARGIDAVAETSMAKLTATET---ACKVAD----EALQIHGGYGYMNEYPIQRAWR 354 Query: 436 ESPANSILLGSGNAM 450 + I G+ M Sbjct: 355 DMRVTRIYGGTSEIM 369 >gi|11498631|ref|NP_069859.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304] gi|2649568|gb|AAB90217.1| acyl-CoA dehydrogenase (acd-7) [Archaeoglobus fulgidus DSM 4304] Length = 397 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 33/273 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K TE + G+D+A I ++ K D Y ++G K F+++ ++D +I+LA+ Sbjct: 113 PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDE-YVINGTKMFITNGSIADYYIVLAR 171 Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + + FLV R E G+ +LKNK+G R+N T E+ F N L Sbjct: 172 TDPNPPKRHHGMSVFLVERERE-----GVQANKLKNKLGIRANDTAEVVFKNVRVPKENL 226 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 +G+ + +I+ + + V+ V LA+ A HYAR R V L D Sbjct: 227 IGEEGKGF-----YQTMIFFNVTRIPVAFQAVGLAQGAFELAYHYARNREVFERKLADFQ 281 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 V + +A + ++ AA L+++ A F + + + + KY+ K A ++ Sbjct: 282 VTQEKLAKMRTELEAARLLAYQAA-YFQDKMGMPDPG-----LTAMAKYYTAKAAQFIVN 335 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG G++ E+ I+R YR+ I G+ Sbjct: 336 EALQIHGGYGFMGEQHISRMYRDVRILEIYEGT 368 >gi|328544858|ref|YP_004304967.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326414600|gb|ADZ71663.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 598 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL T + + P + + + T + LTE GT Sbjct: 126 MYPGLTAGAVAALTLHGTDALKAKYLPNMIAGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ +DG Y ++G K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGLIRTRAVSQADGSYRITGTKIFISAGDHDLSENIIHLVLARIEGAPEGTKGISLFVV 232 Query: 259 P-RLLED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P RL+ D G+ NG+ +++K+G NAT + + G+L+G+ N + M Sbjct: 233 PKRLVGDDGSLGAANGVSCGSIEHKMGIHGNATCVMNYDGATGWLVGEENKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIAD 361 L A+ ++ V+ A+ YAR R +SG +I P ++R + Sbjct: 293 NEARLGVAVQGLAQSEVAYQNAVAYARDRLQGRALSGPKAPDKAADPIIVHPDIRRILMQ 352 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + AA TAL +A D+AK+R++ +M P+ K A A Sbjct: 353 IRAFNEAARALVLWTALHGDVARRSDDAKTRAQAEDMMGLMTPVLKGVLTDTGFANAVNA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI E + + R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIAEWGMEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|149201324|ref|ZP_01878299.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035] gi|149145657|gb|EDM33683.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. TM1035] Length = 592 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 143/330 (43%), Gaps = 46/330 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE GTD+ + ++ + DG Y L+G K F+SS M+D I +LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQGDGSYKLTGQKIFISSGEHDMADNIIHLVLAKIPGGPE 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS NG+ +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFIVKEDGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351 + M + + ++ V+ A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARIGVGMQGLAQAEVAYQNALAYAKDRLQGRAVTGTENPNGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R++ D I A A A D + ++ AA I M P+ K + Sbjct: 341 HPDIRRSLMDQKSFIEGARAFMLWGAELIDRSHRGNDAAAEGLISLMTPVIKGFLTDEGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 DMTVLAQQIYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499 L QD GK V+ + KE++G Sbjct: 448 RKLAQD---GGKHVMAFFELVKTFLKENEG 474 >gi|237813278|ref|YP_002897729.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] gi|237505187|gb|ACQ97505.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] Length = 596 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 102/407 (25%), Positives = 179/407 (43%), Gaps = 73/407 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + P+ K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 V + ++ GG G+IEE A++YR++ +I G+ + +L+ + T Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKT-------- 454 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 +D G+ K +I +R + G A F K L S A AL Sbjct: 455 --ARDGGAVAKALIGEIRQTAEALGAHDGPA-FTAMKTQLESGARAL 498 >gi|172061680|ref|YP_001809332.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171994197|gb|ACB65116.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 595 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 47/322 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+L+G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453 >gi|167563609|ref|ZP_02356525.1| acyl-CoA dehydrogenase domain protein [Burkholderia oklahomensis EO147] Length = 596 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 69/405 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMAGNIVHLVLARTPSAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 +A + A ALS+ A D A ++E A+ + P+ K W +M V Sbjct: 348 LATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 + ++ GG G+IEE A++YR++ +I G+ + +L+ + T Sbjct: 408 SLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKTV--------- 455 Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 +D G+ K ++ +R ++ G A F K LA+ A AL Sbjct: 456 -RDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKTQLANGARAL 498 >gi|108756925|ref|YP_632837.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108460805|gb|ABF85990.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 614 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 180/415 (43%), Gaps = 76/415 (18%) Query: 119 IWDRSFEPVVRKQAHKIRAARLYLMAQLE-------AGHLMSPSVT--SASMVALMTTPR 169 ++++ F+ V H + + + L +E + M P + +A +VA TP Sbjct: 89 LYEQGFKTVGVSPEHGGQGSPMMLQVTVEELLSGANSAFNMYPGLAFGAAEVVAECGTPE 148 Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 K + ++ + + T + LTE G+D+ A S ++ DG Y + Sbjct: 149 QQKQFVERMLNGTWGGT-------------MCLTEPHAGSDVGAAKSTARRNGDGTYNIR 195 Query: 230 GHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQ 273 G K F+S D ++LA+++G + F+VP+L G PN + Sbjct: 196 GTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRINADGSSGQPNDVGVG 255 Query: 274 RLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G +AT + F N G L+G + V ++ ++ A ++V + Sbjct: 256 SIEHKMGINGSATCVINFGESDNCVGELVGTVE----HVGMSQMFKMMNGARIAVGIQGI 311 Query: 331 SLA-----EAIHYARRRHVSG------------GILIDQPVMKRAIADIALDIAAATALS 373 LA A+ YA+ R +I+ P ++R + DI + +L Sbjct: 312 GLASAAYYNALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDIKAHVEGIRSLI 371 Query: 374 FRLANSFDEAK---SRSEEAA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 +LA D+A+ + ++AA ++ P+ K + + A + A+A++ GG+GYI Sbjct: 372 IKLAMHLDKARQLAGKDDDAATYHKGQVELLTPLVKAYSSEQAFRLCAQAIQIYGGAGYI 431 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGS 478 ++ + ++ R+S SI G+ + +D++ + + G F+Q D+GS Sbjct: 432 QDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMG----DVGS 482 >gi|84514409|ref|ZP_01001773.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis SKA53] gi|84511460|gb|EAQ07913.1| acyl-CoA dehydrogenase family protein [Loktanella vestfoldensis SKA53] Length = 592 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 36/315 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ + ++ DG Y +SG K F+S+ D ++LA+++G Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQDDGSYKISGQKIFISAGDHDLAENIIHLVLAKIQGGPD 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+++ +DGS NG+ +++ K+G NAT + + + GFL+G+ + Sbjct: 221 GIKGVSLFIVPKIMVNDDGSLGARNGVSVGKIEEKMGIHGNATCVMNYDDATGFLVGEAH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGG--------ILID 351 + M L + + + A+ YA + R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQAESAYQNAVAYANDRLQGRAVTGAENPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R + D + A A ++ A D A S++ A I M P+ K + Sbjct: 341 HPDIRRNLMDQKSFVEGARAFTYWGAYLIDRAHRNSDKDADGLISLMTPVIKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL-- 464 A + GG GYIEE ++++ R++ I G+ LD++ L+ G ++ Sbjct: 401 EYATAAQQVYGGHGYIEEWGMSQYARDARIAMIYEGANGIQALDLVGRKLALDGGKHVMA 460 Query: 465 -FEQLFSTLEQDLGS 478 FE + + ++++ G+ Sbjct: 461 FFEMIKTFIKENEGN 475 >gi|146278328|ref|YP_001168487.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145556569|gb|ABP71182.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 591 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 91/385 (23%), Positives = 155/385 (40%), Gaps = 58/385 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M +T + A+ T T + W PK+ + ++ T + LTE GT Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVTCDWTGT-------------MNLTEPHAGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258 D+ + ++ + DG Y ++G K F+S+ D ++LA+ G V F+V Sbjct: 171 DLGMMRTKAEPQEDGSYLITGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L EDGS N + ++++K+G NAT L + G+LLG+L+ + M Sbjct: 231 PKYLVNEDGSLGDRNHVSVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQPVMKRAIAD 361 L + + + A+ YAR R +SG LI P ++R + D Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQATTAGAADPLIVHPDIRRNLMD 350 Query: 362 IALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + A AL+F A D + +E ++ P+ K + A + Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRLGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GG GY+EE +++ R++ I G+ LD++ L D G Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG-------------RKLAADGGKP 457 Query: 480 GKKVITILRDSISLCKEDKGLARFL 504 ++R + +ED L FL Sbjct: 458 AMAFFHMIRAFLKENEEDARLKGFL 482 >gi|307730602|ref|YP_003907826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307585137|gb|ADN58535.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 596 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 158/327 (48%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + +DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 171 DLALVRTRAEPQADGSFKLFGTKIFITWGEHDMAANIAHLVLARTPSAPEGVKGISLFIV 230 Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308 P+ L + P+G +R +++K+G +++ T L+F + G L+G+ N Sbjct: 231 PKFLVN--PDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG--- 285 Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356 +E M I++ + + G+ VS +A+ YA+ R S + +I+ P ++ Sbjct: 286 LEYMFIMMNAARFAVGMQGVGVSDRAYQKAVAYAKERVQSRPVDGSSKQPVPIIEHPDVR 345 Query: 357 RAIADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R ++ + A+ AL++ +A+ +A R+E A + PI K W +++ Sbjct: 346 RMLSTMRALTEASRALAYVAAAHSDIAHRHPDAGKRAEHQAINEFLVPIVKGWSTELSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A++YR++ Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|260576256|ref|ZP_05844248.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] gi|259021524|gb|EEW24828.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] Length = 567 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 41/345 (11%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T + AL +P + + PK+ S ++ T + LTE + G+ Sbjct: 124 LNPLLTQGQIEALEHHASPEIKALYLPKLISGDWCGT-------------MNLTESQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ A+ ++ + +DG Y ++G K F+S +D ++LA++ + FLV Sbjct: 171 DVGALRAKAEPNADGTYAVTGQKIFISWADADFAANICHLVLARLPDAAPGTRGISLFLV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+ N L L++K+G + T +++ G+L+G + + M Sbjct: 231 PKFIPDAAGNPGARNSLSVVSLEHKMGLHGSPTAVMQYDAAKGWLIGAPHKGMAAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----VSG-GILIDQPVMKRAIADIALDIA 367 L + ++ + A+ YA R V G G +ID ++R + + +I Sbjct: 291 NNARLGVGVQGIAAAEGAYQLALDYAMDRKQGKTPVPGAGAIIDHADVRRMLVQMRAEIF 350 Query: 368 AATALSFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA A++ A + D A++ ++ A A ++ PI K V + ++ GG G+I Sbjct: 351 AARAIALSCAVATDMARATGSADWQARAALLTPIAKACGTDTGVNVASLGVQVHGGMGFI 410 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468 EE A++ R+ +I G+ +D++ L + G F L Sbjct: 411 EETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLADGGEAAFRLL 455 >gi|300705170|ref|YP_003746773.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CFBP2957] gi|299072834|emb|CBJ44190.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CFBP2957] Length = 595 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + ++DG Y ++G K F+S+ D ++LA++ Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225 Query: 253 --VGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + D G+P NG+ +++K+G NAT + G+++G+ N Sbjct: 226 KGISLFVVPKFIPDAAGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + + V+ + YA+ R +SG D+P Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +RA A+ A AL S + +R E A ++ P+ K + Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESARKEAADLVALLTPVIKAFLTDN 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK I++D + + + F+ Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490 >gi|73542233|ref|YP_296753.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72119646|gb|AAZ61909.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 594 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDEQKATFLPKLICGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNADGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNSARFAVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVKRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVI 412 + + I A ++++ A + D A + ++EA A + PI K W +++ V Sbjct: 348 LMTMRGLIEGARSVAYVAAATCDAAHNHADEAVRTKNQALYEFLVPIVKGWSTELSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A+HYR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|85706101|ref|ZP_01037196.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217] gi|85669265|gb|EAQ24131.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. 217] Length = 582 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE GTD+ + S+ + DG Y ++G K F+SS M+D I +LA++ G Sbjct: 151 MNLTEPHCGTDLGLMRSKAEPQGDGSYKITGQKIFISSGEHDMADNIIHLVLAKIPGGPE 210 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS NG+ +++ K+G N+T + + G+LLG+ + Sbjct: 211 GIKGVSLFIVPKFIVKEDGSLGDRNGVTCGKIEEKMGIHGNSTCVMNYDGATGWLLGEEH 270 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG--------ILID 351 + M + + ++ V+ A+ YA+ R V+G LI Sbjct: 271 KGMRAMFTMMNEARIGVGMQGLAQAEVAYQNALAYAKDRLQGRAVTGAENPNGPADPLIV 330 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R++ D I A A A D + + AA I M P+ K + Sbjct: 331 HPDIRRSLMDQKSFIEGARAFMLWGAELIDRSHRGDDAAAEGLISLMTPVIKGFLTDEGY 390 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 391 DMTVLAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 437 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499 L QD GK V+ + KE++G Sbjct: 438 RKLAQD---GGKHVMAFFDLVKTFLKENEG 464 >gi|297617070|ref|YP_003702229.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144907|gb|ADI01664.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 380 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 31/275 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-----EGRV 253 +TE G+D ++I ++ + D + L G K F + +P +D +I++A+ R Sbjct: 123 FAMTEPWAGSDASSIRTRCRLEGDE-WVLDGTKLFTTNAPYADIYIVMARTGSADDRHRN 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 C LV +E GSP G + R +K+G R +AT +L F N LLG V G Sbjct: 182 TCALV---VEKGSP-GFTFGRQDDKMGIRGSATCQLVFDNCRIPRENLLG--QVGEGFAI 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALD 365 M+ L D + V+ V +A+A + R+ I ++P+ ++ +AD+A Sbjct: 236 AMRTL---DGGRIGVAAQAVGIAQAAYEYALRYAKERIQFEKPIATFQAIQFKLADMATR 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L+++ A + S+E+A+A++ A W V EA++ +GG GYI Sbjct: 293 IEAARLLTYQAAWLQENGFPYSKESAFAKVFAGDVAMW-------VTTEAVQVLGGHGYI 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ + R+ R++ I G+ + + N + K Sbjct: 346 KDHPVERYMRDAKITQIYEGTAEVQKMVIANHILK 380 >gi|313498919|gb|ADR60285.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 592 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 36/315 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + A + LTE GTD+ I ++ Q ++DG Y +SG K F++ D + Sbjct: 154 PMYQGRWAGSMCLTEPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP++L D G N + +++K+G +++AT + F Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDADGVLGEANAVSCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI-- 348 G+L+G+ N + M L I ++ S AI YAR R G+ Sbjct: 274 AIGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEA 333 Query: 349 -------LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 +I P ++R A+ + + AL +A D+ +R+ A + Sbjct: 334 PSQYADPIIVHPDVRRMLLTMKALNEGGRAFSTYVALQLDMAKYSDDPATRANAEAKVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + M + +GG GYI E + R+ I G+ LD++ Sbjct: 394 LTPVAKAFLTDMGLETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453 Query: 456 N--LLEKGTNLFEQL 468 LL G + L Sbjct: 454 GRKLLGDGGKAYRGL 468 >gi|148547881|ref|YP_001267983.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148511939|gb|ABQ78799.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 592 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + A + LTE GTD+ I ++ Q ++DG Y +SG K F++ D + Sbjct: 154 PMYQGRWAGSMCLTEPHAGTDLGLIRTRAQPLADGGYRISGTKVFITGGEQDLTENIIHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP++L D G N + +++K+G +++AT + F Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDVDGVLGEANAVSCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----------- 342 G+L+G+ N + M L I ++ S AI YAR R Sbjct: 274 AIGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPSGVEA 333 Query: 343 -HVSGGILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 S +I P ++R A+ + + AL LA D+ +R+ A + Sbjct: 334 PSQSADPIIVHPDVRRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDPATRANAEAKVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + M + +GG GYI E + R+ I G+ LD++ Sbjct: 394 LTPVAKAFLTDMGLETTLHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|170699188|ref|ZP_02890241.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] gi|170135913|gb|EDT04188.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] Length = 595 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 47/322 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQRQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453 >gi|332557636|ref|ZP_08411958.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332275348|gb|EGJ20663.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 591 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 45/337 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M +T + A+ T T + W PK+ S ++ T + LTE GT Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDWTGT-------------MNLTEPHAGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258 D+ + ++ + DG Y ++G K F+S+ D ++LA+ G V F+V Sbjct: 171 DLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + ++++K+G NAT L + G+LLG+L+ + M Sbjct: 231 PKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L + + + A+ YAR R +SG LI P ++R + D Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMD 350 Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + A AL+F A D + + +E ++ P+ K + A + Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY+EE +++ R++ I G+ LD++ Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG 447 >gi|171694311|ref|XP_001912080.1| hypothetical protein [Podospora anserina S mat+] gi|170947104|emb|CAP73909.1| unnamed protein product [Podospora anserina S mat+] Length = 615 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 57/318 (17%) Query: 199 GLGLTEKRGGTDIA-----------------AITSQGQKISDGIYCLSGHKWFLSSPMSD 241 G +TE+ GG+D++ + SQ + I G + +SG KWF S+ S Sbjct: 175 GQWMTERTGGSDVSQTETVATYDPFPSSAPVPLASQSESIPLGPWSISGFKWFSSATDSH 234 Query: 242 AFIMLAQVEGRVG--CFLVPRLLEDGSP-------------NGLCYQRLKNKIGNRSNAT 286 I+LA+ G F P ++ S NG+ QRLK+K G +S T Sbjct: 235 MTILLARTHPSKGVSAFFAPMRRDNPSLVSHTGESGNGTELNGITIQRLKHKFGTQSLPT 294 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ELE G+L+G+ + + + + + + S+ + SL A +A R V Sbjct: 295 AELELKGMRGWLIGEEGKGIQEISTILNITRVHTTVSSMGYLGRSLGIARSFALVRPVGM 354 Query: 347 G-----ILIDQPVMKRAIADIALDIAAATALSFRL--ANSFDEAKSRSEEAAYA------ 393 G L P+ R +A++ D L+F A DE S +AA Sbjct: 355 GKGKRIALSSHPLHMRTLANMTTDYHGMMLLTFYTIHALGLDERFLPSNQAATKVPTPPK 414 Query: 394 -------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI-----EERSIARHYRESPANS 441 R+++ + K + C+ ++ ME +GG GY+ E +I+R +R+ + Sbjct: 415 ELVQPLLRVLSSLHKSYVCETTVPLVYGCMEALGGVGYMQNVESEHLNISRLFRDCCVGA 474 Query: 442 ILLGSGNAMVLDVLNLLE 459 I G+ + + D L L+ Sbjct: 475 IWEGTTDVLASDTLRALK 492 >gi|15888075|ref|NP_353756.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15155701|gb|AAK86541.1| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 594 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 91/401 (22%), Positives = 166/401 (41%), Gaps = 56/401 (13%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KV W L RR G + F + H + A L + ++P+ Sbjct: 69 KVTTPDGWADLYRRWAEAGWNSLTAPEEFGG--QNLPHMLNVAALEMWNSGSMAFALAPT 126 Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T ++ A++T + + + + PK+ S E+ T + LTE G+D+ Sbjct: 127 LTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGT-------------MNLTEPHAGSDLGV 173 Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLL 262 + ++ ++ DG Y + G K F++ DA ++LA++ + FLVP+ L Sbjct: 174 LKTRAERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFL 233 Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPV 309 D GS N L L++K+G + T + F + G+L+G+ N + Sbjct: 234 PDENGAPGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACM 293 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--------HVSG-GILIDQPVMKRAIA 360 M L + V+ + +AI YA+ R SG +I+ P + R + Sbjct: 294 FTMMNNARLAVGMQGVAICEAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLL 353 Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + + A+SF A++ D +A R+ A ++ PI K + V + Sbjct: 354 TMKALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASM 413 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+IEE AR+ R++ I G+ +D++ Sbjct: 414 GIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLV 454 >gi|300692520|ref|YP_003753515.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum PSI07] gi|299079580|emb|CBJ52258.1| putative putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum PSI07] Length = 595 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 49/339 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + ++DG Y ++G K F+S+ +S+ I L A Sbjct: 166 LTEPHCGTDLGILRTKAEPLADGAYAITGTKIFISAGEHDLSENIIHLVLARLPDAPAGT 225 Query: 250 EGRVGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ + D G+P NG +++K+G NAT + G+++G+ N Sbjct: 226 KG-ISLFVVPKFIPDAAGNPGERNGAKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNK 284 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353 + M L + + V+ + YA+ R +SG D+P Sbjct: 285 GLNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVH 344 Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + +RA A+ A AL S + R E A ++ P+ K + Sbjct: 345 PDVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDEAQRKEAADLVALLTPVIKAFLTD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 405 NAFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG---------- 454 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK I++D + ++ + F+ Sbjct: 455 ---RKILGDMGAKMKKFGKIVQDFVEAEGTNEAMQEFIN 490 >gi|45656441|ref|YP_000527.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599676|gb|AAS69164.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 571 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 102/463 (22%), Positives = 188/463 (40%), Gaps = 75/463 (16%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KVEF P L+ + I G+ + R + + K + ++ + Sbjct: 85 KVEFPPKMLELVSKVIEAGVQAYGFSRKYGGLGIPWTVKSFISEIFYRVDASLA-IAIGC 143 Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 V A ++ T ++ DW P ++ +GLTE G+D++ + Sbjct: 144 VNLAEILERHATEQMKSDWIPHFADGKF-------------VCAMGLTEPDHGSDLSNLR 190 Query: 216 SQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-------FLVPRLLE 263 ++ K +G + L+G K F++ + + LA+ G + FLV Sbjct: 191 TKATKDKNGNWTLNGTKRFITHGCGFGDLPAVLLTLAR-SGEINSGARGLSFFLV----- 244 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LD 319 + ++NK+G + T E+ F N+ G L+G+ E ++ Y L+ Sbjct: 245 --QSTDVQIAGIENKLGLHCSPTCEVVFENSPGLLIGE--------EGYGLIKYTMGMLN 294 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 A M ++ LA EA+ YA+ R G LI+ P +K+ + I + A L+ Sbjct: 295 GARMGIAQQSTGLATAAYYEALKYAKERTQFGKTLIEIPAVKKILDQIERETYAMRCLTL 354 Query: 375 RLANSFD---------EAKSRSEEA-----------AYARIMAPITKYWCCKMAPAVIAE 414 + D E + +E+ A I+ PI+K++C + +++ Sbjct: 355 EGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRYWEKIANILTPISKFYCSESCLKTVSD 414 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-TNLFEQLFSTLE 473 A++ GGSGY E+ I+R YR++ +I G+ + + + G T+ F + S L Sbjct: 415 ALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQIQINACIGGITSGLTHTFGEYVSELI 474 Query: 474 QDLGSS-GKKVITILRDSISLCKE--DKGLARFLTEKIALASS 513 SS K+ ++ + L KE +K + E+I L S Sbjct: 475 SRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIYAEEIVLTCS 517 >gi|167841030|ref|ZP_02467714.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis MSMB43] Length = 596 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 100/407 (24%), Positives = 180/407 (44%), Gaps = 73/407 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ + + T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLIAGVWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAECAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + PI K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPIVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 V + ++ GG G+IEE A++YR++ +I G+ + +L+ + T Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT---TAIQANDLVGRKT-------- 454 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 +D G+ K ++ +R ++ G A F K+ L + A AL Sbjct: 455 --ARDGGAVAKAIVGEIRQTVEALGAHDGPA-FAAMKVQLENGARAL 498 >gi|171317326|ref|ZP_02906522.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171097525|gb|EDT42363.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 595 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 47/322 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFVPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHGDEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453 >gi|126732007|ref|ZP_01747810.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37] gi|126707539|gb|EBA06602.1| acyl-CoA dehydrogenase family protein [Sagittula stellata E-37] Length = 593 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE GTD+ + ++ + DG + ++G K F+S+ MSD + +LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQDDGSHKITGQKIFISAGDHDMSDNVVHLVLAKIPGGPD 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L EDGS N + +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFLVNEDGSLGDRNAVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEAH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LID 351 + M L + + V+ A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQAEVAYQNALAYAKDRLQGRDVTGAKNPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++R++ D + A A + A D A S++ A I M P+ K + Sbjct: 341 HPDIRRSLMDQKSFVEGARAFVYWGAAMIDRAHRNSDKDADGLISLMTPVIKGFLTDRGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 DMCTQAQQVYGGHGYIEEWGMSQFARDARIAMIYEGANGVQALDLVG 447 >gi|207727916|ref|YP_002256310.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206591158|emb|CAQ56770.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 595 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 139/338 (41%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + ++DG Y ++G K F+S+ D ++LA++ Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + D G NG+ +++K+G NAT + G+++G+ N Sbjct: 226 KGISLFVVPKFIPDAGGKPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + + V+ + YA+ R +SG D+P Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +RA A+ A AL S + +R E A ++ P+ K + Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESARKEAADLVALLTPVIKAFLTDN 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK I++D + + + F+ Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490 >gi|325521384|gb|EGD00224.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Burkholderia sp. TJI49] Length = 595 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 47/322 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271 +SG K F+SS MS I L Q + F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLL 453 >gi|126461643|ref|YP_001042757.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126103307|gb|ABN75985.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 591 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 45/337 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M +T + A+ T T + W PK+ S ++ T + LTE GT Sbjct: 124 MYQGLTHGAYSAIHTHGTEEQKRTWLPKMVSCDWTGT-------------MNLTEPHAGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258 D+ + ++ + DG Y ++G K F+S+ D ++LA+ G V F+V Sbjct: 171 DLGMMRTKAEPQEDGSYLVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + ++++K+G NAT L + G+LLG+L+ + M Sbjct: 231 PKYLVNPDGSLGERNNVTVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L + + + A+ YAR R +SG LI P ++R + D Sbjct: 291 NEARLGVGLQGYAVAETAYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMD 350 Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + A AL+F A D + + +E ++ P+ K + A + Sbjct: 351 QKSFVEGARALTFWGAQLIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVW 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY+EE +++ R++ I G+ LD++ Sbjct: 411 GGHGYVEENGMSQFVRDARIAMIYEGANGIQALDLVG 447 >gi|78067517|ref|YP_370286.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383] gi|77968262|gb|ABB09642.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383] Length = 599 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 57/327 (17%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + K + PK+ + E+ T + LTE GTD+ + ++ + DG Y Sbjct: 149 PELQKAYLPKLVTGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 195 Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED--GSP---NGLC 271 +SG K F+SS M++ I L Q + F+VP+ + D G+P NG+ Sbjct: 196 ISGTKIFISSGEHDMAENIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGAPGERNGIK 255 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + + +++A + V + Sbjct: 256 CGSIEHKMGIHGNSTCVMNLDNAKGWMVGEPNKGLN-----AMFVMMNAARLGVGAQGLG 310 Query: 332 LAE-----AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAA 368 L E ++ YA+ R ++G D+P + ++A A+ A Sbjct: 311 LTEVAYQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTY 370 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 +AL S + R E A ++ PI K + A AM+ GG G+I E Sbjct: 371 WSALQIDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFECTNHAMQIYGGHGFISEW 430 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455 + ++ R++ N I G+ + LD+L Sbjct: 431 GMEQYVRDARINMIYEGTNSIQSLDLL 457 >gi|55378707|ref|YP_136557.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55231432|gb|AAV46851.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 379 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 144/308 (46%), Gaps = 55/308 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 +SM+ + + W PKI S E A ++E G+++A I + Sbjct: 94 SSMIQKYGDEWMKEKWLPKITSGES-------------ACASAISEPAHGSNVAGIETYA 140 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272 ++ SDG + L+G+K W + ++D +++A+ + G FLVP +GL Sbjct: 141 ERDSDG-WVLNGNKMWITNGTVADVMVVMAKTDPDAGHEGISAFLVPT-----DTDGLQA 194 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIM 323 +++ NK+G R++ E+ ++ D+ V P E++ +++ + S Sbjct: 195 EKIDNKLGIRASDLAEI--------IIDDVRV---PEENLIGEAGAGFYQLMDFFASGRA 243 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +V+ V A+A I YA R G + + ++ +A++A ++ AA +L++R A+ Sbjct: 244 NVAAQAVGTAQAAIDDSIEYANEREQFGQPISEFQAIEHKVAEMATNVEAARSLTYRAAS 303 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D S A + + K + + A V EA++ GG+GY+ + ++ R+YR++ Sbjct: 304 AID-----SGNLDVATKLTSMAKLFASEHAVDVADEAIQVHGGAGYVTDHNVERYYRDAR 358 Query: 439 ANSILLGS 446 I G+ Sbjct: 359 ITKIYEGT 366 >gi|260429527|ref|ZP_05783504.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45] gi|260420150|gb|EEX13403.1| acyl-CoA dehydrogenase family protein [Citreicella sp. SE45] Length = 568 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 49/354 (13%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +T + AL + + + PK+ S E+ T + LTE + G+ Sbjct: 126 LNPLLTQGQIEALEHHASDEIKALYLPKLISGEWSGT-------------MNLTEPQAGS 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ A++S+ DG Y ++G K F+S +D ++LA++ G + F+V Sbjct: 173 DVGALSSRADDNGDGTYAITGQKIFISWGDADFVENVCHLVLARLPGAPAGTKGISLFMV 232 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+P N L L++K+G + T + + G+++G P MK Sbjct: 233 PKFIPDAAGNPGVANSLKVVSLEHKMGLHGSPTCVMSYEGATGWMIG------APGSGMK 286 Query: 314 -ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG---ILIDQPVMKRAIADIAL 364 + +++A + V G V AE A+ +A R +I ++R +A + Sbjct: 287 AMFTMMNNARLGVGGQGVGAAEGAYQHALAFANERKQGKSPFDTIIGHADVRRMLATMKA 346 Query: 365 DIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +I AA A++ A S D A +E A A + PI K + + V ++ GG Sbjct: 347 EIFAARAIALDCAISIDMGRATGEAEWDARAAFLTPIAKAFGTDIGCEVSEMGVQVHGGM 406 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLEQD 475 GY+EE A+ YR+ +I G+ +D++ L G +L +E D Sbjct: 407 GYVEESGAAQFYRDVRVTAIYEGTNGIQAMDMVGRKLMDGGEAAARLLDEIEAD 460 >gi|187924959|ref|YP_001896601.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187716153|gb|ACD17377.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 596 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ +S +A+ YA+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVGISDRAYQKAVAYAKDRVQSRPVDGSAKQSVAIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + A+ AL++ A DEAK R+E A + PI K W +++ V Sbjct: 348 LSTMRGLTEASRALAYVAAAHCDIAHRHPDEAK-RAEHQAIYEYLVPIVKGWSTELSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|288960818|ref|YP_003451158.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] gi|288913126|dbj|BAI74614.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] Length = 598 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 57/415 (13%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG 251 A + LTE + G+D+ A+ ++ DG + L G K F++ D ++LA+ G Sbjct: 160 AATMNLTEPQAGSDVGALRTRAVPQPDGTHRLFGQKIFITYGDHDLTENIIHLVLARTPG 219 Query: 252 R------VGCFLVPRLL-EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT----FGF 297 V FLVP+ L EDG P N + +++K+GN + T + + G+ Sbjct: 220 APEGSKGVSLFLVPKFLPEDGWPGRRNDVYCAGIEHKMGNHGSPTCTMVYGGNGEGAVGW 279 Query: 298 LLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----L 349 L+G N V + ++ + MS + +LA A + R GG + Sbjct: 280 LVGAENKGLQTMFVMVNSARFVVGQEGTAMSERAYQQALAYARERVQGRLAKGGTASVPI 339 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403 I P ++R + + A A+++ +A + D A R E A+ +M PI K W Sbjct: 340 IRHPDVRRMLLSMRSQTEAMRAVAYAIAGARDLASRHPDPEIRRERQAFVNLMIPIFKGW 399 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460 + A V + +++ GG GY+ E +++ R+ +SI G+ + D+++ + Sbjct: 400 ASETAVEVTSTSIQVHGGMGYVLESGVSQPLRDVRVSSIYEGTTSIQAHDLVDRKLARDG 459 Query: 461 GTNL---FEQLFSTLEQDLGSSGKK----VITILRDSISLCK--EDKGLARFLTEKIALA 511 G L Q+ TL Q LG G+ + T LR ++ + D+ LA + + + Sbjct: 460 GAALRAWLSQVHLTLRQ-LGDGGRDEFAVIQTNLRKAVDALQGAADRVLAEYERQPQEVL 518 Query: 512 SSAAALYR-----AGMNDIADVFL-ENRFLDNCHST-----HCMLHGRFNAAHII 555 + A R AG +A L R LD +L RF A H++ Sbjct: 519 AGAVPFLRLCGVVAGGWQMARAALAAGRQLDRREGNADFLRRKLLSARFYATHVL 573 >gi|114797077|ref|YP_760546.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] gi|114737251|gb|ABI75376.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] Length = 589 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 44/318 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + DG Y ++G K ++ Sbjct: 150 PKLVSGEWTGT-------------MNLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYI 196 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNK 278 + M++ I L A +G + FLVP+ + DG+P NG+ L+ K Sbjct: 197 TWGDHDMAENIIHLVLARLPDAPAGSKG-ISLFLVPKFILDADGTPGERNGVRCIGLEKK 255 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 +G + T +E+S G+L+G+ N + M L+ + V+ + A Y Sbjct: 256 MGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAY 315 Query: 339 A--RRRHVSGGILIDQPVM-----KRAIADIALDIAAATALSFR------LANSFDEAKS 385 A R++ + G+ P++ +R + + +AAA A+ + LA+S + Sbjct: 316 AQERKQGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDV 375 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 R+ ++ PI K W + V + ++ GG G++ E A+ YR++ I G Sbjct: 376 RAAAKTREDLLTPIAKAWSTDIGVEVASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEG 435 Query: 446 SGNAMVLDVLNLLEKGTN 463 + +D++ GT Sbjct: 436 TNGIQAIDLVGRKLSGTK 453 >gi|83718689|ref|YP_442192.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|167619151|ref|ZP_02387782.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis Bt4] gi|257138382|ref|ZP_05586644.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia thailandensis E264] gi|83652514|gb|ABC36577.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis E264] Length = 596 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + PI K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPIVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|23014717|ref|ZP_00054520.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 546 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 42/282 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS---SPMSDAFIML--------- 246 + LTE + G+D+AAI S+ + DG + LSG K F++ ++D + L Sbjct: 162 MNLTEPQAGSDLAAIRSK--AVPDGDKFRLSGQKIFITYGDHDLADNIVHLVLARLPDAP 219 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 A V+G + F+VP++L DGS N L L++K+G + T + F + G LG+L Sbjct: 220 AGVKG-ISLFVVPKILPDGSRNDLKCVSLEHKLGIHGSPTAVMSFGDHEG-ALGELVGQ- 276 Query: 307 GPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----------HVSGGILI 350 P ++ + + ++ A ++V +++AE A +YAR R S GI + Sbjct: 277 -PHRGLEYMFVMMNHARLAVGLQGLAIAERAYQQARNYARDRVQGKPAGWTGSGSAGI-V 334 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWC 404 P ++R + + I A + + A S D E +R E + PI K WC Sbjct: 335 HHPDVRRLLMTMKSGIEAMRGIHYTAAASADIAHHHPEPNARYEANQRLEFLTPIAKGWC 394 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ + + ++ GG GYIEE A+H R++ +I G+ Sbjct: 395 TELGQHIASLGVQVHGGMGYIEETGAAQHLRDARITTIYEGT 436 >gi|53720107|ref|YP_109093.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126442296|ref|YP_001059884.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 668] gi|126453376|ref|YP_001067171.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia pseudomallei 1106a] gi|134277599|ref|ZP_01764314.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|167720647|ref|ZP_02403883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei DM98] gi|167816838|ref|ZP_02448518.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 91] gi|167846744|ref|ZP_02472252.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei B7210] gi|167895330|ref|ZP_02482732.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 7894] gi|167911965|ref|ZP_02499056.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 112] gi|167919957|ref|ZP_02507048.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei BCC215] gi|242314186|ref|ZP_04813202.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] gi|254195643|ref|ZP_04902070.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|254295639|ref|ZP_04963097.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|52210521|emb|CAH36504.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126221789|gb|ABN85295.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 668] gi|126227018|gb|ABN90558.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106a] gi|134251249|gb|EBA51328.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 305] gi|157805512|gb|EDO82682.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 406e] gi|169652389|gb|EDS85082.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei S13] gi|242137425|gb|EES23827.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1106b] Length = 596 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + P+ K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|76811404|ref|YP_334354.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|167739633|ref|ZP_02412407.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] gi|167825240|ref|ZP_02456711.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 9] gi|167903716|ref|ZP_02490921.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177] gi|217420548|ref|ZP_03452053.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|226197861|ref|ZP_03793435.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|254192011|ref|ZP_04898511.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254261810|ref|ZP_04952864.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] gi|76580857|gb|ABA50332.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|157987833|gb|EDO95598.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|217395960|gb|EEC35977.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 576] gi|225930049|gb|EEH26062.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei Pakistan 9] gi|254220499|gb|EET09883.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1710a] Length = 596 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + P+ K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|226943545|ref|YP_002798618.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226718472|gb|ACO77643.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 585 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 45/336 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P + + L TP + + + I S E PT + LTE + G+ Sbjct: 126 MYPGIAHGAYECLRAHGTPELRERYLADIVSGEILPT-------------MCLTEPQAGS 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ + S+ + +DG Y LSG K F S D ++LA++ + FLV Sbjct: 173 DVGLLRSRAEPAADGGYRLSGSKLFASGGEHDLTGNILHLVLARLPDAPPGSRGISLFLV 232 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 P+LL DG N + +++K+G R +AT L F + G+LLG+ + + M L Sbjct: 233 PKLLPDGRRNAVRCDGIEHKLGIRGSATCTLSFEHAEGWLLGEPHKGLAAMFVMMNSARL 292 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------------LIDQPVMKRAIADIALD 365 + + + A YA R + + P M+R + ++ Sbjct: 293 HVGLQGLGHAEAAWQNAAQYAAERRQMRAVRRPPGRAEAPADPIHYHPAMRRVLLELRTL 352 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 AL + A+ DEA+ ++ A AR ++ P+ K + + + + A++ Sbjct: 353 TEGMRALGYWTAHLLDEAEQGADPARRARAQGRAMLLTPLVKAFFTEQGFRLASAALQVF 412 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG GY++E +I + R+S I GS D+L Sbjct: 413 GGYGYVQEYAIEQTLRDSRIAMIYEGSNEIQANDLL 448 >gi|254437740|ref|ZP_05051234.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] gi|198253186|gb|EDY77500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] Length = 591 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 97/438 (22%), Positives = 182/438 (41%), Gaps = 74/438 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + E+ T + LTE GT Sbjct: 124 MYPGLTHGNISAIVTHGTDAQKAMYLPKMATGEWSGT-------------MNLTEPHCGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLV 258 D+ + ++ + DG Y +SG K ++S+ D ++LA++ G + F+V Sbjct: 171 DLGLMRTKAEPQDDGSYKVSGQKIWISAGEHDLSENIIHLVLAKIPGGPDGVKGISLFIV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + + G+ N L L+ K+G NAT + + G+L+G+++ + M Sbjct: 231 PKFIVNADGSLGTRNALSCGGLEEKMGIHGNATCVMNYDGATGYLIGEMHKGMRAMFTMM 290 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L + + V+ A+ +AR R V+G +I P ++R + D Sbjct: 291 NEARLGVGLQGYAQGAVAYENALGFARDRLQGRAVTGVEEPDKPADPIIVHPDVRRNLMD 350 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECI 419 + A AL++ A D + +E A A I M P+ K + A + + Sbjct: 351 QKSFVEGARALTYWGATLMDRSHKNGDEDAEALISLMTPVIKGFLTDKGFETCVLAQQTL 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 GGSG+ E + + R++ I G+ LD++ + LG + Sbjct: 411 GGSGFTREWGLEQFVRDARITMIYEGTNGIQALDLVG-----------------RKLGLN 453 Query: 480 GKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIADVFLENRFLDN 537 G K + + I + ++KG A F + + L +++ L AGM F+ N Sbjct: 454 GGKTVMAFFEMIKTYIADNKGDAAFEADFLEPLKAASKDLQAAGM----------YFMQN 503 Query: 538 CHSTHCMLHGRFNAAHII 555 + + L G ++ H++ Sbjct: 504 MKNPNDALSGSYDFMHMM 521 >gi|83746627|ref|ZP_00943677.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|207742321|ref|YP_002258713.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83726761|gb|EAP73889.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|206593711|emb|CAQ60638.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 595 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + ++DG Y ++G K F+S+ D ++LA++ Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSENIVHLVLARLPDAPPGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + D G NG+ +++K+G NAT + G+++G+ N Sbjct: 226 KGISLFVVPKFIPDAGGKPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + + V+ + YA+ R +SG D+P Sbjct: 286 LNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +RA A+ A AL S +R E A ++ P+ K + Sbjct: 346 DVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPNESARKEAADLVALLTPVIKAFLTDN 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 406 AFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK I++D + + + F+ Sbjct: 455 --RKILGDMGARMKKFGKIVQDFVEAEGTSEAMQEFIN 490 >gi|24216375|ref|NP_713856.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|24197657|gb|AAN50874.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 571 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 102/463 (22%), Positives = 188/463 (40%), Gaps = 75/463 (16%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KVEF P L+ + I G+ + R + + K + ++ + Sbjct: 85 KVEFPPKMLELVSKVIEAGVQAYGFSRKYGGLGIPWTVKSFISEIFYRVDASLA-IAIGC 143 Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 V A ++ T ++ DW P ++ +GLTE G+D++ + Sbjct: 144 VNLAEILERHATEQMKSDWIPHFADGKF-------------VCAMGLTEPDHGSDLSNLR 190 Query: 216 SQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-------FLVPRLLE 263 ++ K +G + L+G K F++ + + LA+ G + FLV Sbjct: 191 TKATKDKNGNWTLNGTKRFITHGCGFGDLPAVLLTLAR-SGEINSGARGLSFFLV----- 244 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LD 319 + ++NK+G + T E+ F N+ G L+G+ E ++ Y L+ Sbjct: 245 --QSTDVQIAGIENKLGLHCSPTCEVVFENSPGLLIGE--------EGYGLIKYTMGMLN 294 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 A M ++ LA EA+ YA+ R G LI+ P +K+ + I + A L+ Sbjct: 295 GARMGIAQQSTGLATAAYYEALKYAKERTQFGKTLIEIPAVKKILDRIERETYAMRCLTL 354 Query: 375 RLANSFD---------EAKSRSEEA-----------AYARIMAPITKYWCCKMAPAVIAE 414 + D E + +E+ A I+ PI+K++C + +++ Sbjct: 355 EGSRVMDRYYWRAIRLEKQGATEKEIKNDTVVRYWEKIANILTPISKFYCSESCLKTVSD 414 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG-TNLFEQLFSTLE 473 A++ GGSGY E+ I+R YR++ +I G+ + + + G T+ F + S L Sbjct: 415 ALQVHGGSGYTEDYDISRIYRDARIVTIYDGTSQIQINACIGGITSGLTHTFGEYVSELI 474 Query: 474 QDLGSS-GKKVITILRDSISLCKE--DKGLARFLTEKIALASS 513 SS K+ ++ + L KE +K + E+I L S Sbjct: 475 SRSDSSFTHKLFYGFQELVKLYKELPEKEMKDIYAEEIVLTCS 517 >gi|224823857|ref|ZP_03696966.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224604312|gb|EEG10486.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 593 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 59/321 (18%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+A + ++ DG Y +SG K F+ Sbjct: 149 PKMASGEWTGT-------------MNLTEPQAGSDLAQVRTRAVPQDDGSYRISGQKIFI 195 Query: 236 SSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLE--DGSP---NGLCYQRLKNK 278 + D ++LA+ V+G + F+VP+ L DG+P N L L++K Sbjct: 196 TWGEHDLAENIVHLVLARLPDAPAGVKG-ISLFVVPKFLPGADGTPGARNDLRCVSLEHK 254 Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---L 332 +G + T + F + G+L+G+ N G + M L + V GM VS Sbjct: 255 LGIHGSPTCVMSFGDQGGAAGYLVGEANKGLGYMFTMMNHARLG---VGVEGMAVSERAY 311 Query: 333 AEAIHYARRR---------HVSGGILIDQPVMKRAIADIALDIAA--------ATALSFR 375 +A+ YAR R +G +I P ++R + + I A A AL Sbjct: 312 QQAVAYARERVQSRAVGSPDAAGVAIIKHPDVRRMLMTMKAQIEAQRALAFVAAAALDRA 371 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + + K+R++ A + PI K W + A + + A++ GG GYIEE +A++YR Sbjct: 372 ARHPHPQEKARNQ--ALVNFLIPIVKGWNTEQANEITSLALQVHGGMGYIEETGVAQYYR 429 Query: 436 ESPANSILLGSGNAMVLDVLN 456 ++ +I G+ LD++ Sbjct: 430 DARITAIYEGTTGIQALDLIG 450 >gi|307244669|ref|ZP_07526772.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678] gi|306491920|gb|EFM63970.1| acyl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678] Length = 377 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 16/263 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM GLTE G+D A+I + +K D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMVTGEKLFAFGLTEPGAGSDAASILTTAEKDGDD-YILNGRKTFITGAPVSDYVIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 +G + + D G+ + + +NK+G T ++ N + +LG Sbjct: 170 TNPELGVKGISTFVVDSKLEGVSFGKAENKMGMIGCPTSDVVLENVRVSKDCMLG--REG 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + MK L L A ++ ++ EAI YA+ RH G + + +A++ Sbjct: 228 KGFINAMKTLSVGRLGIACQALGLAEGAMEEAIKYAKSRHQFGKSIAKFQNTQFILAEME 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +AA L + A D ++ +EA+ A++ A W +I +A++ GG G Sbjct: 288 TKLAAMRHLVYDAAYKMDLGQAADKEASMAKLFATEEAKW-------IIDKALQIHGGYG 340 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI+E + R YR+ SI G+ Sbjct: 341 YIKEYPVERMYRDIRVTSIYEGT 363 >gi|170691427|ref|ZP_02882592.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170143632|gb|EDT11795.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 595 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + K + PK+ S + T + LTE GTD+ + ++ + SDG Y Sbjct: 144 TPELQKVYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNDAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+L+G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|94984213|ref|YP_603577.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] gi|94554494|gb|ABF44408.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 612 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 91/401 (22%), Positives = 159/401 (39%), Gaps = 61/401 (15%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL + + + + PK+ S E+ T + LTE GT Sbjct: 130 MYPGLSHGAYSALSAVGSEELKNLYLPKLVSGEWTGT-------------MCLTEPHAGT 176 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ I ++ DG Y ++G K F+S+ D ++LA++EG + FLV Sbjct: 177 DLGIIRTKATDNGDGTYAITGTKIFISAGEHDLAENILHLVLARLEGSPMGTKGISLFLV 236 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + + G N + L++K+G NAT L F G+L+G++N + M Sbjct: 237 PKFIPNADGTLGERNAVVCGSLEHKMGIHGNATAVLNFDGAKGYLVGEINKGMNHMFIMM 296 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQPVMKRAIADI 362 L + + + V+ A+ YA+ R +I P ++R + Sbjct: 297 NAARLGTGLQGLGLGEVAYQNALAYAKERLQMRHEPRVKPSEPADPIIVHPDVRRMLLTG 356 Query: 363 ALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 A AL+ LA + D + R E A ++ P+ K + + Sbjct: 357 KAYTEAGRALAMWLALNIDLEHHHPDEAGRQEAADLVALLTPVAKAFMTDNGFQTAVLSQ 416 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 + GG GYI E + + R++ I G+ LD+L + D Sbjct: 417 QVFGGHGYIREWGMEQFVRDARIGQIYEGTNGIQALDLLG-------------RKVLMDG 463 Query: 477 GSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 G +K+ +L+ + ED+ LA +L + AS L Sbjct: 464 GKKLQKLAGMLQQFVEENAEDEQLAPYLDQLSKAASQLGTL 504 >gi|307320678|ref|ZP_07600091.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306893713|gb|EFN24486.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] Length = 598 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 83/416 (19%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ + + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGLLRTKAAPNGDGSYSISGQKIFISAGEHDMAENVVHLVLARIEGAPDGVKGISLFI 231 Query: 258 VPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ E G NG+ +++K+G NAT + + G+L+G N Sbjct: 232 VPKFKLDASGEPGERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355 + + ++ A ++V +S+AE A YAR R +SG +I P + Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAASYARERIQGRSLSGPKAPDKKADPIIVHPDI 346 Query: 356 KRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R + I TAL +A+ D + R +M PI K Sbjct: 347 RRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSEEERQTADDILSLMTPILKGVLTDKGF 406 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + GG GYIEE ++++ R++ I G+ LD++ G L Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAM--- 458 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 + G+ V+ + ++ C+E++G EK++ + A + G+ND+ Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRG-----DEKLSGYTKA---LKKGLNDL 498 >gi|290968887|ref|ZP_06560424.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] gi|290781183|gb|EFD93774.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] Length = 379 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F+++ S D +I+ A + G + Sbjct: 123 FGLTEPNAGTDASGQQTVAVK-KDDYYILNGSKVFITNGGSADIYIVFAMTDKSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + +L++K+G ++ T+EL F + + N+ E KI ++ Sbjct: 182 SAFIVEKGTEGFTFGKLEDKMGIHTSKTMELVFQDA---KVPAENLLGKEGEGFKIAMMT 238 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AEA + Y+++R G L + +AD+ + + AA L Sbjct: 239 LDGGRIGVAAQALGIAEAALNDAVEYSKQRVQFGKPLCKFQNIGFKLADMKMKVEAARNL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E + + +AA I K + +A V EA++ GG GY EE AR Sbjct: 299 VYKAAFKKQEGQPFTVDAA-------IAKRYASDVAMEVSVEAVQIFGGYGYSEEYPAAR 351 Query: 433 HYRESPANSILLGSGNAMVL 452 H R++ I G+ M++ Sbjct: 352 HLRDAKITQIYEGTNEVMLM 371 >gi|45659102|ref|YP_003188.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602348|gb|AAS71825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 534 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 17/260 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 GLGLTE G+D A + + +K DG + L+G K F+++ P+ FI++A+ G Sbjct: 127 GLGLTEPDSGSDAAGMRTYAEKTKDG-FVLNGSKTFITNGPIGQVFIIMARTTKSRGPMG 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G ++ K+G+ ++ T EL F + + LLG L+ +G + K Sbjct: 186 ISAFIVESKNKGFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLH--SGFLRIGKA 243 Query: 315 LIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + ++ + GM L I Y+ +R G +++ +K IA I + + AA Sbjct: 244 TLEWERTVLLAALMGGMENILENCIRYSWQRQQFGKSILNFFAIKEKIARIWVYLCAARR 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +++ +A K E + + I K + +++ V ++A++ GG GY+ E S++ Sbjct: 304 MTYFVAR-----KKDFEPNVSLPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVS 358 Query: 432 RHYRESPANSILLGSGNAMV 451 R YR+ +I G G + + Sbjct: 359 RFYRDVKLGTI--GGGTSEI 376 >gi|209521554|ref|ZP_03270255.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209498024|gb|EDZ98178.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 596 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 57/372 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSETQKQTFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D ++LA+ EG G FLV Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIVHLVLARTPNAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ +S +A+ YA+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAVAYAKERVQSRPVDGSAKQSVAIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 ++ + A+ AL++ A+ D A +EA A+ + PI K W +++ V Sbjct: 348 LSTMRSLTEASRALAYVAASHCDVAHRHPDEATRAKHQAIYEYLVPIVKGWSTELSVDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ I G+ D++ L G + ++L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTLRDGGKVAKELLA 467 Query: 471 TLEQDLGSSGKK 482 + + + + G + Sbjct: 468 GIAETVEALGAQ 479 >gi|91784793|ref|YP_559999.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91688747|gb|ABE31947.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 596 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 84/325 (25%), Positives = 156/325 (48%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YA+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 +A + A+ AL++ A D A ++EA A+ + PI K W +++ V Sbjct: 348 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWSTELSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|254251442|ref|ZP_04944760.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] gi|124894051|gb|EAY67931.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] Length = 595 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 60/372 (16%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQRYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + N G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDNAKGWIVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLAYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADDAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493 R++ N I G+ + LD+L G D+G+ KK I+ D + Sbjct: 432 VRDARINMIYEGTNSIQALDLLGRKVLG-------------DMGAKLKKFGKIVSDFVEA 478 Query: 494 CKEDKGLARFLT 505 +A F+ Sbjct: 479 EGVKPEMAEFVN 490 >gi|241661981|ref|YP_002980341.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240864008|gb|ACS61669.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 595 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254 LTE GTD+ + ++ + ++DG Y ++G K F+S+ D ++LA++ G Sbjct: 166 LTEPHCGTDLGILRTKAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGT 225 Query: 255 ----CFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 F+VP+ + D G+P NG+ +++K+G NAT + G+++G+ N Sbjct: 226 KGISLFVVPKFIPDASGNPGERNGVKCGSIEHKMGIHGNATCVINLDGAKGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + S+ V+ + YA+ R +SG D+P Sbjct: 286 LNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +RA A+ + AL S + R + A ++ PI K + Sbjct: 346 DVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHKDESVRKDAADLVALLTPIAKAFLSDN 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 406 AFIATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK +++D + ++ + F+ Sbjct: 455 --RKILGDMGAKMKKFGKLVQDFVEAEGTNEAMQEFIN 490 >gi|332185888|ref|ZP_08387635.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp. S17] gi|332014246|gb|EGI56304.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp. S17] Length = 598 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 51/342 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + ALM + + + PK+ S E+ T + LTE GT Sbjct: 125 LYPGLTHGATTALMGHGSEDLKSFYLPKMISGEWSGT-------------MCLTEAHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QVEGRVGCFL 257 D+ + ++ + DG Y ++G K F+S+ ++D I L V+G + FL Sbjct: 172 DLGLLRTRAEPQEDGSYAITGGKIFISAGDHDLTDNVIHLVLARTPDAPKGVKG-ISLFL 230 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L +DGS NG+ +++K+G +++AT +LEF+++ G+++G+LN + M Sbjct: 231 VPKYLPKDDGSVGPANGVSVAAIEHKMGLKASATCQLEFNDSKGWVVGELNKGLAAMFTM 290 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQPVMKRAIA 360 + I + ++ A+ YA+ R GG +I P ++R + Sbjct: 291 MNTERVSVGIQGLGVNEIAYQSAVAYAKDRLQGRALGGAKRPDLPADPIIVHPDVRRMLM 350 Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + + AL A D + ++ A + +M P+ K +A Sbjct: 351 TMRVYAEGCRALGQWAARGLDAEAHAIDPADKARAADFVALMTPVVKALFTDLAFDAANL 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A++ GG G+I + I + R++ I G+ LD++ Sbjct: 411 AVQVHGGHGFIRDHGIEQFVRDARIAQIYEGTNGVQALDLVG 452 >gi|167581071|ref|ZP_02373945.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis TXDOH] Length = 596 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTEAQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A ++E A+ + P+ K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|254181106|ref|ZP_04887704.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] gi|184211645|gb|EDU08688.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei 1655] Length = 596 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A + A ALS+ A D A + E A+ + P+ K W +M Sbjct: 346 RMLATMRALTEGARALSYVAAAHSDHAHRAANEGVRAKHQAIYEYLVPVVKGWSTEMVNE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|228942797|ref|ZP_04105318.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975656|ref|ZP_04136197.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228784044|gb|EEM32082.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816857|gb|EEM62961.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 337 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M ++ LTE G+D A+ + +++ D + L+GH Sbjct: 49 KRWGTEEQKRKWLP----EMATGNLLFSFALTEPEVGSDAKAVGTSYKQVDDH-FILNGH 103 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 104 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 158 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 159 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 210 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 211 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQ------EAGKKRQDRHTDAVIETT 264 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA V +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 265 IAKYFASKMAMKVATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 316 >gi|256371495|ref|YP_003109319.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008079|gb|ACU53646.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 1146 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 29/337 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCL-SGHKWFLSSP-MSDAFIMLAQVEGRV------ 253 TE G+D+ ++ ++ + +G + + + K+F S+ ++D ++ A V G V Sbjct: 157 FTETHAGSDLGSLRARATQTPNGEWRIGTAEKFFASNAGLADVALVAAHV-GEVRGVRSL 215 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 G FLV R DGS +RLK+K+ R+ T E++ ++ LL + P + Sbjct: 216 GLFLVRREQPDGS-LAFSVRRLKDKLATRAVPTGEVDLADAPAELL-----AAPPDGIHR 269 Query: 314 ILIYLDSA----IMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 IL L A MS +G+ R++LAEA +RR G L+ + +A + A Sbjct: 270 ILESLTIARVANAMSAAGIARIALAEATIRGQRRVAFGRPLLAHALFADELARLRASQLA 329 Query: 369 ATALSFRLANSFDEA-KSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + L+F LA + S + AY R + + K + A V AME GG G++ Sbjct: 330 TSLLAFELAEETQSSLGSHHGDRAYQILRARSHVAKVRTAEQAAFVTQRAMEAFGGLGFV 389 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT---NLFEQLFSTLEQDLGSSGKK 482 E+ IAR +RE+ I G+ + LD +L E++ + L+ GS GK+ Sbjct: 390 EDAPIARWHREALVLPIWEGTPHVHALDAAEVLADRVVRDGFVERITAALD---GSVGKR 446 Query: 483 VITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 + +R + + E AR L + S AAA+ R Sbjct: 447 LGDAVRRTAAELAEAPTNARHLLTHLGALSEAAAVAR 483 >gi|24216816|ref|NP_714297.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|24198183|gb|AAN51315.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 534 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 17/260 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 GLGLTE G+D A + + +K DG + L+G K F+++ P+ FI++A+ G Sbjct: 127 GLGLTEPDSGSDAAGMRTYAEKTKDG-FVLNGSKTFITNGPIGQVFIIMARTTKSRGPMG 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G ++ K+G+ ++ T EL F + + LLG L+ +G + K Sbjct: 186 ISAFIVESKNKGFSVSKVLKKLGHNTSTTAELTFEDMYVPDENLLGPLH--SGFLRIGKA 243 Query: 315 LIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + ++ + GM L I Y+ +R G +++ +K IA I + + AA Sbjct: 244 TLEWERTVLLAALMGGMENILENCIRYSWQRQQFGKSVLNFFAIKEKIARIWVYLCAARR 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +++ +A K E + + I K + +++ V ++A++ GG GY+ E S++ Sbjct: 304 MTYFVAR-----KKDFEPNVSLPMESSILKVFASEVSEEVASDAVQIYGGMGYMREVSVS 358 Query: 432 RHYRESPANSILLGSGNAMV 451 R YR+ +I G G + + Sbjct: 359 RFYRDVKLGTI--GGGTSEI 376 >gi|325187778|emb|CCA22323.1| shortchain specific acylCoA dehydrogenase putative [Albugo laibachii Nc14] Length = 409 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 34/276 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRV 253 GLTE G+D A ++ ++ DG + ++G K W ++ D I+ A Q + Sbjct: 147 FGLTEPGNGSDAGAASTTARETKDG-FVINGTKAWTTNAHEGDQVIIFATTDKAQKHKGI 205 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+VP G + + K+G R+++T L + LLG L E Sbjct: 206 SAFIVPM-----KTPGFSLGKKEEKLGIRASSTANLILEDVHIPKENLLGRLG------E 254 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI +I LD+ + V+ + +A+A I YA +R G IL +++ +AD+A+ Sbjct: 255 GFKIAMITLDAGRIGVAAQALGIAQASLDCAIKYAHQRKAFGQILAKNAIIQSKLADMAM 314 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA L+++ A D ++ AA A++ A C +A++ +GG GY Sbjct: 315 EIEAARLLTYKAAMDKDNGLPITKIAAMAKLKASEVATMCSH-------QAIQILGGMGY 367 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + + RHYR++ I G+ L + L K Sbjct: 368 VSDMPAERHYRDARITEIYEGTSEIQRLVIATSLNK 403 >gi|228909059|ref|ZP_04072888.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200] gi|228850567|gb|EEM95392.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus thuringiensis IBL 200] Length = 382 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M ++ LTE G+D A+ + +++ D + L+GH Sbjct: 94 KRWGTEEQKRKWLP----EMATGNLLFSFALTEPEVGSDAKAVGTSYKQVDD-YFILNGH 148 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203 Query: 291 FSNTFGFLLGDLNVST----GPVE---DMKILIYLDSAIMSVSGMRVSLAEA-----IHY 338 L D+ V GP+ + LD S++ V++A+ + Y Sbjct: 204 --------LQDVKVPAENLLGPIGGGWSYVVNTALDHGRYSIAWAGVAIAQEALEAMVAY 255 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +RRR + + ++ +A+ +++I AA +L + K R + A I Sbjct: 256 SRRRKQGNKYICEYEAIQTILAEASVNIKAARSLCQ------EAGKKRQDRHTDAVIETT 309 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I KY+ KMA + +A++ GG+G+ E + R +RE+ I+ G+ + Sbjct: 310 IAKYFASKMAMKIATDAVQVFGGNGFSREYPVERLFREAKVLEIIEGTSQVL 361 >gi|316934710|ref|YP_004109692.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602424|gb|ADU44959.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 379 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + ++ + D Y ++G K F++S M +I A G G V Sbjct: 125 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL G GL LK K+G ++ T L F N G LLG M I++ Sbjct: 184 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----MIIMM 237 Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S ++ ++ +V L EA YA++R G L+ V++ + D+A IAA+ A Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATAYAKQRVTFGKPLVKHQVIRHKLVDMAQKIAASQA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA D+ +S E + A T +C +EA++ GG+GY+ + Sbjct: 298 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350 Query: 432 RHYRESPANSILLGSGNAM 450 R YR+ N+I G+ M Sbjct: 351 RIYRDVKVNAIGGGTEEIM 369 >gi|227820752|ref|YP_002824722.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234] gi|227339751|gb|ACP23969.1| acyl-CoA dehydrogenase protein [Sinorhizobium fredii NGR234] Length = 598 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 83/416 (19%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ + + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGLLRTKAIPNGDGSYRISGQKIFISAGEHDMAENIIHLVLARIEGAPEGVKGISLFI 231 Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP +L +DG P NG+ +++K+G N+T + + G+L+G N Sbjct: 232 VPKFKLNDDGEPGARNGVSCGAIEHKMGIHGNSTCVMNYDEATGYLIGAENKGLN----- 286 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355 + + ++ A ++V +++AE A +YAR R +SG +I P + Sbjct: 287 AMFVMMNEARLAVGMQGLAIAEIAYQNAANYARERLQGRSLSGVKAPEQKADPIIVHPDV 346 Query: 356 KRAIADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R++ I A + A TAL +A+ D R +M PI K Sbjct: 347 RRSLMTIKAFNEAGRAFTLWTALKSDIAHRSDNEAERQAADDILGLMTPILKGVLTDKGF 406 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + GG GYIEE ++++ R++ I G+ LD++ G L Sbjct: 407 DHTVVAQQLFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAI--- 458 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 + G+ V+ + ++ C+E++G R AL + G+ND+ Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRGDERLSAYTKAL--------KKGLNDL 498 >gi|11498451|ref|NP_069679.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304] gi|2649762|gb|AAB90397.1| acyl-CoA dehydrogenase (acd-5) [Archaeoglobus fulgidus DSM 4304] Length = 381 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 143/302 (47%), Gaps = 30/302 (9%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAA 213 S+ SA + A + P V K F E P + K + +TE G+D+ A Sbjct: 82 SIGSAVLTASLGCPMV------KYFGTEEQKERYLPKVVKGETPSAIAITEPDAGSDVQA 135 Query: 214 ITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 I ++ +++ DG + L+G K F+++ +S+ ++LA+ + G + L + +G Sbjct: 136 IKTKAERV-DGGWKLNGTKTFITNGSVSEWVVILAKTQPDAGYRGISAFLVETGWDGYEA 194 Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 +R+K K+G + T E+ + F ++G N +++ + + + + V ++ Sbjct: 195 RRIK-KMGLNCHDTAEIYLKDVFVPETHIIGQENFGF-----YQLMRFFNESRVFVGAVQ 248 Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + +A A+ YA++R G LI+ ++ +AD+ DI AA L ++ A D K Sbjct: 249 LGMAVGAYERALEYAKQRKAFGKPLIEHQAIQFKLADMWKDIEAAKLLIYKAAWLIDRGK 308 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + ++ A++ A T A EA++ GG GY +E I R+YR++ +I Sbjct: 309 ANPALSSAAKLFASET-------AIKATYEALQIFGGYGYSKEYDIERYYRDARVGTIYE 361 Query: 445 GS 446 G+ Sbjct: 362 GT 363 >gi|39935206|ref|NP_947482.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39649057|emb|CAE27578.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 379 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + ++ + D Y ++G K F++S M +I A G G V Sbjct: 125 LAITEPSGGSDVANLRTRAVRDGDH-YVVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL G GL LK K+G ++ T L F N LLG M I++ Sbjct: 184 LLLIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAANLLGTEGAGF-----MIIMM 237 Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S ++ ++ +V L EA YAR+R G L+ V++ + D+A IAA+ A Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATEYARQRVTFGKPLVKHQVIRHKLVDMAQKIAASQA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA D+ +S E + A T +C +EA++ GG+GY+ + Sbjct: 298 MLELLAWRVDQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350 Query: 432 RHYRESPANSILLGSGNAM 450 R YR+ N+I G+ M Sbjct: 351 RIYRDVKVNAIGGGTEEIM 369 >gi|300788948|ref|YP_003769239.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299798462|gb|ADJ48837.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 382 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 31/265 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVEG----- 251 GLTE G+D A+I ++ ++ DG + L+G K F+S + MS +LA V G Sbjct: 123 FGLTEPTAGSDAASIRTRARRDGDG-WVLNGTKMFISNAGTEMSLGVTVLA-VTGDGDKR 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G F +P DG+P Q L+ K+G + T EL F++ L GD + Sbjct: 181 RFGTFFIP----DGTPGYEKGQPLR-KLGWHAMDTRELVFTDVR--LPGDHLIGEEGNGL 233 Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + L LD+ +SV+ + +SLA+A + +A R G L + +AD+A +I Sbjct: 234 RQFLEVLDAGRISVAALGLSLAQASLDLALRHATDRQQFGRPLSGFQAVAHKLADMATEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA AL +R A D+ + S+EAA A K + ++A + +++ GG GY+ Sbjct: 294 EAARALVYRAAWLGDQGRPFSQEAAMA-------KLYASEVANRAASASVQIHGGYGYMR 346 Query: 427 ERSIARHYRESPANSILLGSGNAMV 451 E +I+R Y + A + +G G + V Sbjct: 347 ESAISRFY--ADAKILEIGEGTSEV 369 >gi|254505266|ref|ZP_05117417.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222441337|gb|EEE48016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 620 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 51/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL T T + + P + S ++ T + LTE GT Sbjct: 148 MYPGLTAGAIAALTTHGTDEQKQTYLPNMISGKWTGT-------------MNLTEPHCGT 194 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ I ++ +DG Y +SG K F+S+ MSD I +LA++EG + F+V Sbjct: 195 DLGLIRTKAVSQADGSYKISGTKIFISAGEHEMSDNIIHLVLARIEGAPEGNKGISLFVV 254 Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 PR + EDG+ NG+ +++K+G NAT + + + G+L+G+ N + M Sbjct: 255 PRNEIAEDGTSGARNGVSCGSIEHKMGIHGNATCVMNYDDATGWLVGEENKGLRAMFVMM 314 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIA 360 L A+ +S V+ A+ YA+ R + G L I P ++R + Sbjct: 315 NEARLGVAVQGLSQSEVAYQNAVTYAKDR-IQGRALTGPKSPDKAADPIIVHPDVRRTLM 373 Query: 361 DI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 I A + AA TAL +++ ++ K + +M P+ K + Sbjct: 374 SIRAFNEAARALVIWTALHGDVSHRSEDDKDKQFSDDMMGLMTPVLKGVLTDIGFENAVN 433 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + GG GYI E + + R++ I G+ LD++ Sbjct: 434 AQQMYGGHGYIGEWGMEQFVRDARIAMIYEGANGIQALDLV 474 >gi|221638614|ref|YP_002524876.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides KD131] gi|221159395|gb|ACM00375.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides KD131] Length = 591 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 43/315 (13%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK+ S ++ T + LTE GTD+ + ++ + DG Y ++G Sbjct: 146 RTWLPKMVSCDWTGT-------------MNLTEPHAGTDLGMMRTRAEPQEDGSYLVTGE 192 Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRL 275 K F+S+ D ++LA+ G V F+VP+ L + G N + ++ Sbjct: 193 KIFISAGDHDMAENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNVTVGKI 252 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 ++K+G NAT L + G+LLG+L+ + M L + + + A Sbjct: 253 EHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAETAYQNA 312 Query: 336 IHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 + YAR R +SG LI P ++R + D + A AL+F A D + Sbjct: 313 VAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQLIDRS 372 Query: 384 --KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + +E ++ P+ K + A + GG GY+EE +++ R++ Sbjct: 373 VRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRDARIAM 432 Query: 442 ILLGSGNAMVLDVLN 456 I G+ LD++ Sbjct: 433 IYEGANGIQALDLVG 447 >gi|239817373|ref|YP_002946283.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239803950|gb|ACS21017.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 589 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 83/371 (22%), Positives = 156/371 (42%), Gaps = 48/371 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ +DG ++G K F+S D ++L ++ G Sbjct: 164 LTEAHAGSDLGQVRTRATAQADGSLRVNGGKIFISGGEHDLTPNIVHLVLCRMHGSEVQA 223 Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + LVP+LL DG+ N + +R++ K+G + T + F + G+L+G+ Sbjct: 224 PAGPKGLSLVLVPKLLPDGTRNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGL 283 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG------------ILIDQ 352 + M L A+ + + + +A YA RR+ + G ++ + Sbjct: 284 AAMFVMMNAARLHVALQGIGLLDAAWQKADAYAAERRQMRAPGTVPASRGSEAADLIAEH 343 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 P ++R + I A L++R A D +AK+R + ++ P+ K C + Sbjct: 344 PAIRRILDTQRAWIDGARTLAYRSALMLDVAAHDADAKARERAQRWCSLVTPVLKAACTQ 403 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464 A +E ++ GG GY+ E I + R++ I G+ +D+L +L G Sbjct: 404 QAFHGASECLQVFGGHGYVREWGIEQIVRDARVTMIYEGTNEIQAIDLLVRKVLPDGGAG 463 Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMND 524 + L L +S RD+ + + R+L IA+A+ A + + Sbjct: 464 MSAVLLELRDALDAS--------RDADADVQRRLAQLRYLGTTIAMAAQANPVL---PYE 512 Query: 525 IADVFLENRFL 535 +AD +L L Sbjct: 513 VADAYLRAVML 523 >gi|221134571|ref|ZP_03560876.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Glaciecola sp. HTCC2999] Length = 589 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 46/330 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 + +A+++ + + + PK+ + +Y T + LTE G+ +A I Sbjct: 128 TTAAANVIKHFASETLQAQFLPKMLTGQYSGT-------------MALTEPHAGSGLADI 174 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261 T+ G Y + G K ++S +S+ I +LA++ G + F+VP RL Sbjct: 175 TTTAYPTEQGHYLIKGSKLYISGGEHELSENIIHLVLAKIPGGPAGVKGISLFVVPKFRL 234 Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311 DG P N + L +K+G R + L F + G+L+G+ L + + Sbjct: 235 NNDGQPEQRNDVTLAGLIHKLGYRGTTSTALTFGENGDCHGYLVGEPHKGLQYMFMMMNE 294 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++ + +A++ G + SL YA+ R G +++ +KR + A Sbjct: 295 ARVGVGFGAAMIGYRGFQYSL----DYAKDRIQGGKPIVEHGDVKRMLLLQKAYTEGAMN 350 Query: 372 LSF---RLAN---SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 L F RL + + D+ +R A ++ PI K W + P A++ +GG+GY Sbjct: 351 LCFYGARLVDDMHTHDDESTRQSSAQLLDLLTPIIKAWPSEYGPKSNDLAIQVLGGAGYT 410 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455 E + + +R++ N I G+ LD++ Sbjct: 411 REYPVEQLWRDNRLNPIHEGTNGIQALDLI 440 >gi|261251343|ref|ZP_05943917.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891] gi|260938216|gb|EEX94204.1| branched-chain acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891] Length = 384 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 25/275 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256 LTE G+D AA+ + Q++ DG Y ++G K F+S + +D +++A+ +G G F Sbjct: 124 LTEPNAGSDAAALVTSAQQVDDG-YLINGSKVFISGAGETDVLVVMARTSDDGAKGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 +VP + G+ Y R + K+G S T + F N LLG+ G V MK Sbjct: 183 VVP-----ATAQGISYGRKEPKMGWNSQPTRSINFDNVKIPKDHLLGE--EGQGFVFAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L ++ A S+ + +L +A Y + R G + ++ +AD+A ++ AA Sbjct: 236 GLDGGRINIATCSIGTAQQALNQATQYLKERKQFGKPIAQFQALQFKLADMATELVAARH 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A+ D + E AY + K + + V +A++ GG GYI+E + Sbjct: 296 LVRLAASKLDSGDT--EATAYC----AMAKRFATDVGFKVCDQALQLYGGYGYIKEYPME 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNLF 465 R++R+ + IL G+ M V+ LL +G +F Sbjct: 350 RYFRDVRVHQILEGTNEIMRVIIARRLLAEGAQIF 384 >gi|56695213|ref|YP_165561.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56676950|gb|AAV93616.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 567 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 34/301 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y ++G K F+ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIFI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA+ V G G FLVPR L D G N L L++K+ Sbjct: 197 SWGDNDFCDNVCHLVLARLPDGVPGTKGISLFLVPRNLPDENGNAGVANSLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T +++ G+L+G+ + + M L V + A+ YA Sbjct: 257 GLHGSPTCVMQYDGATGWLVGEEHGGMAAMFTMMNNARLGVGGQGVGVAEAAWQHAMAYA 316 Query: 340 RRRH---VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R + G + D ++R + + D+ AA A+ A + D A +E A A Sbjct: 317 MERKQGKSASGTIADHADVRRMLTSMKADVFAARAILAACAVAIDMGNATGSAEWKARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI K + AV ++ GG G+IEE A+ YR+ +I G+ +D+ Sbjct: 377 FLTPIAKAFGTDTGIAVSETGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDL 436 Query: 455 L 455 + Sbjct: 437 V 437 >gi|77462751|ref|YP_352255.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|77387169|gb|ABA78354.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] Length = 591 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 43/320 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK+ + ++ T + LTE GTD+ + ++ + DG Y Sbjct: 141 TEEQKRTWLPKMVTCDWTGT-------------MNLTEPHAGTDLGMMRTKAEPQEDGSY 187 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLED-----GSPNGL 270 ++G K F+S+ D ++LA+ G V F+VP+ L + G N + Sbjct: 188 LVTGEKIFISAGDHDLAENIVHLVLAKAPGGGEGTKGVSLFIVPKYLVNPDGSLGERNNV 247 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 ++++K+G NAT L + G+LLG+L+ + M L + + Sbjct: 248 TVGKIEHKMGIHGNATCVLNYDGAKGWLLGELHKGMRAMFTMMNEARLGVGLQGYAVAET 307 Query: 331 SLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + A+ YAR R +SG LI P ++R + D + A AL+F A Sbjct: 308 AYQNAVAYARDRLQGRSLSGQGTTAGPADPLIVHPDIRRNLMDQKSFVEGARALTFWGAQ 367 Query: 379 SFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 D + + +E ++ P+ K + A + GG GY+EE +++ R+ Sbjct: 368 LIDRSVRQGDAEAEGLISLLTPVIKGFQTDKGLESAVAAQQVWGGHGYVEENGMSQFVRD 427 Query: 437 SPANSILLGSGNAMVLDVLN 456 + I G+ LD++ Sbjct: 428 ARIAMIYEGANGIQALDLVG 447 >gi|115372660|ref|ZP_01459967.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella aurantiaca DW4/3-1] gi|310823814|ref|YP_003956172.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115370381|gb|EAU69309.1| acyl-CoA dehydrogenase, medium-chain specific [Stigmatella aurantiaca DW4/3-1] gi|309396886|gb|ADO74345.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 378 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 44/279 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----VGC 255 LTE G+D+A +++ + D Y L+G K F+++ ++ + + A V+ + C Sbjct: 124 LTEPGAGSDVAGLSTTARLDGDH-YVLNGSKCFITNGTYAEQYTVFATVDKDRKHKGISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV------ 309 F+V +G P GL + +NK+G R++ TV L F D+ V PV Sbjct: 183 FVV-----EGQPPGLTIGKHENKMGQRASNTVTLTFE--------DVRV---PVANRIGE 226 Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E LI +++ A+ SV R +L ++ Y+ +R G + + ++ +AD Sbjct: 227 EGQGFLIAMETLDNSRPLTAMFSVGIARAALEHSLEYSSQRRTFGKAIREHQGVQFMLAD 286 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + ++I AA L+++ A DE + + ++YA+ A MA V +A++ GG Sbjct: 287 MGMNIQAARLLTYQSALLLDEGQKNTLISSYAKCFA-------ADMAMKVTTDAVQVYGG 339 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GYI+E + + R++ I G+ L + L K Sbjct: 340 YGYIKEYPVEKLMRDAKLIQIYEGTSQVQRLVIARELFK 378 >gi|294084749|ref|YP_003551507.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664322|gb|ADE39423.1| acyl-CoA dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] Length = 590 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 95/388 (24%), Positives = 175/388 (45%), Gaps = 66/388 (17%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 HL++ A + + +P + P + S E+ T + LTE + GT Sbjct: 126 HLLTQGAIDA--LEQVASPEQKATFLPNLISGEWSGT-------------MNLTEPQAGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257 D+ A+ + D Y + G K +++ MS I L V+G + F Sbjct: 171 DLGALRTMATPNGDH-YLIKGQKIYITYGQHDMSKNIIHLVLARTPDAPDGVKG-ISLFA 228 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 VP++L +DGS N + ++ K+G +++ T L++ + G+L+G+ N + Sbjct: 229 VPKILVNDDGSLGEANDVFCVSIEKKLGIKASPTAVLQYGDNNGAVGYLIGEENKG---L 285 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------HVSGGILIDQPVMKR 357 E M + +++A +V V+++E A+HYA R G +I P + R Sbjct: 286 EYM--FLMMNNARFAVGMQGVAISERAYQQAVHYAHDRVQGTPIAGNKGDSIIHHPDVLR 343 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIA 413 + + +I A AL D++ E AA+ A ++ P+ K W + + A+ + Sbjct: 344 MLTIMKAEIEAMRALMVVGGACLDKSHG-DENAAFWHERASLLIPVIKGWMTERSQALTS 402 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFST 471 +A++ GG G+IEE +A+HYR++ I G+ D++ L G LF+ Sbjct: 403 DAVQIHGGMGFIEETGVAQHYRDARILPIYEGTTAIQANDLVFRKTLRDGGAAVTSLFAD 462 Query: 472 LEQDLGSSGKKVITILRDS-ISLCKEDK 498 ++ D+ + +IT DS ++L K+ K Sbjct: 463 IDTDMNA----IITTQNDSTMALAKQVK 486 >gi|158521318|ref|YP_001529188.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510144|gb|ABW67111.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 604 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 62/343 (18%) Query: 157 TSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS 216 ++A M+ T K + P + S ++ T + LTE + GTD+ AI + Sbjct: 132 STAGMIQHHGTEEQKKKYIPNLVSGKWGGT-------------MLLTEPQAGTDVGAIET 178 Query: 217 QGQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFLVPRLL--E 263 K DG Y L+G+K F+++ +++ I +LA++EG + F+VP+ + + Sbjct: 179 SAVKNPDGTYSLTGNKIFITNGEQNLTENIIHPVLARIEGHDPGTKGISIFIVPKFMVND 238 Query: 264 DGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317 DGS N + + K+G ++AT + + GFLLG+ + MKI+ Sbjct: 239 DGSLGERNDIVCTGTEEKMGIHASATCSMSLGSKGKCVGFLLGEEK------QGMKIMFE 292 Query: 318 LDSAIMSVSGMRV------SLAEAIHYARRRHVSGGIL------------IDQPVMKR-- 357 + + +G++ + A++YAR R S I+ I P ++R Sbjct: 293 MMNEARMATGLQAFAYASAAYLIAVNYARERIQSRDIMDYKNPAAPGVPIIKHPDVRRNL 352 Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 +I D T ++ A ++ R + ++ P+ K + V Sbjct: 353 LWMKSIVDGMRSFFYYTGVAGTKAEIVEDETERRRNSGLFELLTPLIKEYLSFRGHEVCV 412 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +AM+ +GGSGYI+E + ++ R+ +I G +D+L Sbjct: 413 QAMQVLGGSGYIKEYLVEQYTRDCKITTIYEGCSGVQAMDLLG 455 >gi|284164207|ref|YP_003402486.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284013862|gb|ADB59813.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 383 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 134/276 (48%), Gaps = 40/276 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + G ++E G+D+++++++ +K D + ++G+K W + + D F+ML + Sbjct: 112 PVARGEKISGAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGTVGDFFVMLCK 170 Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 EGR F +++ + +G +++ K+G R++ T EL +L D+ V Sbjct: 171 TDPDAEGRYDGF--SQIVVEADRDGFESEKITGKLGIRASDTAEL--------ILDDVRV 220 Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 P E++ + + + D+ V+ V +A+ A+ YA+ R G + Sbjct: 221 ---PEENLIGDQGAAFLQQMQFFDATRTGVAAQGVGIAKGALRAALEYAQDREQFGQPIS 277 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + ++ +AD+A AA L+++ A + D+ ++ +A + K + ++A Sbjct: 278 EFQAIQHKLADMATKTEAARNLTYKAAWNVDQGNDITK-------LASMAKEYSSRIAVD 330 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V EA++ GGSGY+ + + R YR+S I G+ Sbjct: 331 VANEAVQIHGGSGYVNDFPVERFYRDSKITQIYEGT 366 >gi|171060702|ref|YP_001793051.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170778147|gb|ACB36286.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 596 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 143/341 (41%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP + P++ S E+ + + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTPEQQATYLPRLTSGEWTGS-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + ++DG Y ++G+K F+S+ D ++LA++ G + F+V Sbjct: 175 DLGLLRTKAEPLADGSYAITGNKIFISAGEHDLAANIVHLVLARLPGAPEGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G+ NG+ L++K+G NAT +L G L+G+ + + M Sbjct: 235 PKFNVNADGSLGARNGIWCGGLEHKMGIHGNATAQLVLDGAVGTLVGEPHKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355 L + S+ V+ A+ YA+ R ++G +D+P + Sbjct: 295 NAARLGVGMQSLGLTEVAYQNAVAYAKDRIQMRALTGPKALDKPADPIIVHPDVRKMLLT 354 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA A+ + TAL S + R A ++ PI K + + Sbjct: 355 ARAYAEGGRALCVHTALMLDQELSHPDEAVRRASADEVALLTPIVKAFLTDNGWIATSHC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 415 LQVFGGHGYIREWGMEQYVRDARINMIYEGTNTIQSLDLLG 455 >gi|110681102|ref|YP_684109.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans OCh 114] gi|109457218|gb|ABG33423.1| acyl-CoA dehydrogenase family protein [Roseobacter denitrificans OCh 114] Length = 593 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251 + LTE GTD+ + ++ + +DG Y ++G K F+S+ D ++LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSYRITGQKIFISAGEHDMSSNIIHLVLAKIPGGPE 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ L EDG+ NG+ +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFLVKEDGTLGERNGVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351 + M L + +S + A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGMQGMSQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAP 409 P ++R++ D + A A A D A +S ++A ++ P+ K + Sbjct: 341 HPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447 >gi|148547625|ref|YP_001267727.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148511683|gb|ABQ78543.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 581 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 31/302 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE----GR 252 LTE + G+D++ + + + DG Y +SG+K F+S D ++LA++ G Sbjct: 164 LTEPQAGSDLSLLRCRAVPLGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAPPGN 223 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G LVP+ LEDG N L L++K+G R +AT L G+L+G + + Sbjct: 224 RGLSLLLVPKWLEDGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLAAMF 283 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVS------GGILIDQPV-----MKRA 358 M L + + + +A YA RR +S GG+ P+ M+R Sbjct: 284 VMMNSARLHVGLQGLGHAEAAWQQARDYALERRQMSAPGRAKGGVQGADPIHLYPAMRRV 343 Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + ++ + AL++ +A++ E R++ A ++ PI K + ++ Sbjct: 344 LLELRVRTEGMRALAYWTAQWLEIADAAVEPAQRAKAATLVALLTPIVKAAFTEQGFSLA 403 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFS 470 ++A++ GG GY +E +I + R+S I G+ D++ +L G F L Sbjct: 404 SQALQVFGGYGYTQEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFALLLG 463 Query: 471 TL 472 L Sbjct: 464 EL 465 >gi|145225519|ref|YP_001136197.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315445872|ref|YP_004078751.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145218005|gb|ABP47409.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315264175|gb|ADU00917.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 380 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 24/269 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+T + + DG Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALTCRATAV-DGGYRITGSKAWITHGGIADFYNLFARTGEGSQGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR E GL + + + K+G + T + + L D + T Sbjct: 186 VPRDTE-----GLTFGKPEEKMGLHAVPTTAAHYDDAN--LDSDRRIGTEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA EA+ Y++ R G +ID + +AD+A + +A Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYSQERTTFGRKIIDHQGLAFLLADMAAAVDSAR-- 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ +GG+GY + + R Sbjct: 297 ----ATYLDAARRRDAGLPYSR-HASVAKLVATDAAMKVTTDAVQVLGGAGYTRDYRVER 351 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461 + RE+ I G+ L + L +G Sbjct: 352 YMREAKITQIFEGTNQIQRLVISRHLTRG 380 >gi|226941823|ref|YP_002796897.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] gi|226716750|gb|ACO75888.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] Length = 594 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 65/349 (18%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P +++ ++ AL + + + PK+ S E+ T + LTE G+ Sbjct: 122 LAPMLSTGAIEALEHNGSDEIKATYLPKLISGEWAGT-------------MNLTEPNAGS 168 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ +DG Y ++G K F++ M+D + L A V+G + F+ Sbjct: 169 DLAQVRTKAVPQADGSYLITGQKIFITWGEHDMTDNIVHLVLARLPDAPAGVKG-ISLFV 227 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 VP+ L + G+ N + +++K+G + T + F + G+L+G+LN Sbjct: 228 VPKFLVNADGSLGARNDVRCVSIEHKLGIHGSPTAVMSFGDQGGAVGYLVGELNKGLA-- 285 Query: 310 EDMKILIYLDSAIMSVS--GMRVS---LAEAIHYAR---------RRHVSGGILIDQPVM 355 + + +++A M V+ GM +S +A+ YAR R + +I P + Sbjct: 286 ---HMFVMMNNARMGVAVQGMAISERAYQQAVEYARDRIQCRELGSRDPASVAIIRHPDV 342 Query: 356 KRAIADIALDIAAATALSFRLA--------NSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 +R + + I A L++ + E K+R + A + PI K W + Sbjct: 343 RRMLMTMRAQIEAQRLLTYAAGAALDRAARHPVPEEKARQQ--ALINFLIPIVKGWNTEQ 400 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + + ++ GG G+IEE A+H+R++ SI G+ +D++ Sbjct: 401 SVEITSLGVQVHGGMGFIEETGAAQHFRDARITSIYEGTTGIQAMDLIG 449 >gi|77461388|ref|YP_350895.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77385391|gb|ABA76904.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 598 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 52/337 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ I ++ +DG Y ++G K F+S+ MSD I L A Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAVTGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L D G NG+ +++K+G +++AT L F + GFL+G+ N Sbjct: 224 KG-ISLFIVPKFLPDASGEAGERNGVSCGSIEHKMGIKASATCVLNFDDAKGFLIGEPNK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV------ 354 + M L + + + S AI YA + R ++G D+P Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRALTGAKSPDKPADPIIVH 342 Query: 355 --MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 ++R + + AL++ A D +A++R E + PI K + Sbjct: 343 PDVRRMLLTMKAFNEGNRALTYFTAQMLDVAHLSPDAEARQEAEDLLAFLTPICKAFMTD 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 V M+ GG G+I E + + R+ I G+ LD+L Sbjct: 403 TGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG---------- 452 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 + LGS GK + + C + G A+ Sbjct: 453 ------RKVLGSQGKLLRNFTKIVHKFCAANAGNAQL 483 >gi|89899081|ref|YP_521552.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89343818|gb|ABD68021.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 569 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 30/305 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252 LTE + G+D+ + ++ Q +DG LSG K F+S D ++LA++ G Sbjct: 164 LTEPQAGSDLGLVRTKAQPQADGSCRLSGTKIFISGGEHDLTDNIVHLVLARLPDAPPGP 223 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G FL P+ + DG+ N + +R++ K+G +AT + F G+++G+ + Sbjct: 224 KGLSLFLSPKFMPDGARNPVHCERIEEKMGLHGSATCVMRFDEATGWIVGEPGRGLNAMF 283 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----------VSGGILIDQPVMKR-- 357 M L + + + + +A YA+ R ++++ P M+R Sbjct: 284 VMMNAARLHVGLQGIGLLDAAWQKADAYAKERRQMRAPVRGTSAAEADLIVEHPAMRRIL 343 Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 A D +A TAL + +K ++E + ++ P+ K A + Sbjct: 344 DTQRAWIDGGRVLAYKTALELDVIKHHPNSKRKAEAERWCSLVTPVLKAAWTAQAFNGAS 403 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFST 471 + ++ GG GY+ E I + R+S I G+ +D+L +L G L Sbjct: 404 DCLQVFGGHGYVREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGAGLTALLQQ 463 Query: 472 LEQDL 476 L DL Sbjct: 464 LSDDL 468 >gi|170750227|ref|YP_001756487.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656749|gb|ACB25804.1| acyl-CoA dehydrogenase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 579 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 26/280 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+A + ++ DG Y ++G+K +++ ++D + L A Sbjct: 152 MNLTEPQAGSDLALLRTRAVPAGDGTYRITGNKIYITYGEHDLADNIVHLVLARLPDAPA 211 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G + FLVP++L DG+ N L +++K+G ++ T + F + G+L+G N Sbjct: 212 GTRG-ISLFLVPKVLPDGTRNDLRCSGIEHKLGIHASPTCSMAFGDQVGATGWLIGQENK 270 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI--------LIDQPVMK 356 + M L+ + V + A+ YA+ R + + P ++ Sbjct: 271 GLACMFTMMNAARLNVGLQGVGVAEAATQRALAYAQERRQGKAVGAAEATSPIAAHPDVQ 330 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAE 414 R + + AAA A+ + A + D AK +AA R ++ P+ K + +A V + Sbjct: 331 RMLLTMKASTAAARAICYLTAAALDAAKGPEGQAALDRASLLTPVAKAFATDLANEVTSL 390 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ GG G++EE A+ R++ I G+ +D+ Sbjct: 391 GVQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDL 430 >gi|162451848|ref|YP_001614215.1| butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] gi|161162430|emb|CAN93735.1| Butyryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 619 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 88/365 (24%), Positives = 159/365 (43%), Gaps = 64/365 (17%) Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T +A ++ TPR + +++ ++ T + LTE + G+ Sbjct: 132 MYPGLTYGAAEVIEHFGTPRQRDLFLKRMYGGQWSGT-------------MCLTEPQAGS 178 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + + K DG Y + G K F+S D ++LA+VEG + F+V Sbjct: 179 DVGSSRTSAVKQKDGKYLIRGTKIFISGGDQDLTENVVHLVLARVEGAPPGTKGLSLFVV 238 Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P R+ +DGS PN + +++K+G ++T L F + G L+G + P Sbjct: 239 PKIRVNDDGSLGGPNDVVVGNIEHKMGINGSSTCVLNFGESDACLGELVGTVEHQGMP-- 296 Query: 311 DMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL------------IDQP 353 ++ ++ A +SV VS+A A+ YA+ R IL ID P Sbjct: 297 --QMFRMMNGARISVGLQGVSVASSAYLNALEYAKDRKQGSSILQWKDATAPRVPVIDHP 354 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYAR----IMAPITKYWCC 405 ++R + D+ + AL +LA D AAY + ++ P+ K + Sbjct: 355 DVRRMLLDMKSRVEGIRALIIKLARHQDAVAVYQGKDDRAAAYNQGQVDLLVPLVKAYSS 414 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNL 464 A V A++ GG+GY ++ + ++ R++ SI G+ + +D++ L +G + Sbjct: 415 DQAFRVCETAIQTFGGAGYTKDYPVEQYCRDAKVFSIYEGTNHIQAMDLVGRKLGQGGGV 474 Query: 465 FEQLF 469 Q F Sbjct: 475 NLQAF 479 >gi|159037973|ref|YP_001537226.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157916808|gb|ABV98235.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length = 381 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 17/266 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E +GG+D A +T++ + DG Y +SG K W + ++D F + + G G + Sbjct: 127 LSEPQGGSDAAGLTTRAARDGDG-YVVSGTKAWITHAHVADFFNIFCRTGG-AGARGISC 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 LL D S G+ Q + +G ++ ++ F T + D + + LDS Sbjct: 185 LLADRSMPGIQPQVAERTMGLHASPVAQIAFDETR--VPADRLIGGEGEGFGIAMSALDS 242 Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++ V LA+A + YAR R G ++D + +AD A I+AA AL Sbjct: 243 GRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDFQGLGFMLADAATQISAARALMLT 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D + S EAA A++ A +A V +A++ +GG+GY+ + + R+ R Sbjct: 303 AARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTIDAVQVLGGAGYVADHPVERYMR 355 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461 E+ I+ G+ + + L KG Sbjct: 356 EAKVLQIVEGTNQIQRVVISRALAKG 381 >gi|332016277|gb|EGI57190.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior] Length = 411 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 L+E G+D A ++ + +DG IY ++G K W ++ + A I+ A + Sbjct: 150 FALSEPGNGSDAGAASTTAK--ADGSIYTINGTKSWITNAFEASAIILFATTDKSKKHKG 207 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + ++ D GL + ++K+G R ++T L F + + N+ P KI ++ Sbjct: 208 ISAIVMDSPTAGLSLGKKEDKLGIRGSSTCSLIFEDC---QVPQDNILGKPGMGFKIAMM 264 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + +A+A + YA +R G +I +++ IAD+AL + ++ Sbjct: 265 TLDAGRIGIAAQALGIAQASLDCAMDYASKRQAFGQSIIKLQAIQQKIADMALKLESSRL 324 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++R A D K ++EAA A++ A T +C + ++ +GG GY+ + Sbjct: 325 LTWRAAQLKDNGKPYTKEAAMAKLSASETATFCAH-------QCLQILGGMGYVSDMPAE 377 Query: 432 RHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 378 RHYRDARITEIYEGT 392 >gi|83854767|ref|ZP_00948297.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1] gi|83842610|gb|EAP81777.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. NAS-14.1] Length = 600 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 46/330 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE GTD+ + ++ DG Y ++G K F+SS M+D I +LA++EG Sbjct: 168 MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQKIFISSGEHDMADNIIHLVLAKIEGGPE 227 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS N + ++ K+G N+T + + G+LLGD + Sbjct: 228 GIKGVSLFIVPKFMVKEDGSLGERNAVSVGSIEEKMGIHGNSTCVMNYDGAVGYLLGDEH 287 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351 + M + + ++ V+ A+ YA+ R V+G LI Sbjct: 288 KGMRAMFTMMNEARVGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGTEHPDKPADPLIV 347 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409 P ++R++ + + A A A+ D A ++ A +M P+ K + + Sbjct: 348 HPDIRRSLMEQKSFVEGARAFILWGASLIDAAHRADDKDADGLVSLMTPVIKGFLTDIGY 407 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 408 DMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG------------- 454 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKG 499 L QD GK V+ + KE+ G Sbjct: 455 RKLAQD---GGKHVMAFFDMVKTFIKENAG 481 >gi|312898588|ref|ZP_07757978.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359] gi|310620507|gb|EFQ04077.1| butyryl-CoA dehydrogenase [Megasphaera micronuciformis F0359] Length = 379 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE GTD A + K D Y L+G K F+++ +D +I+ A + G + Sbjct: 123 FALTEPNAGTDAAGQQTVAVKEGDH-YVLNGSKIFITNGGAADIYIVFAMTDKSQGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + +G + + ++K+G ++ T+EL F N + N+ + KI ++ Sbjct: 182 SAFILEKGMDGFTFGKKEDKMGIHTSQTMELVFQNV---KVPAENLLGQEGKGFKIAMMT 238 Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ +LA+AI Y+++R G L + +A++A I AA L Sbjct: 239 LDGGRIGVAAQALGIAEAALADAIEYSKQRVQFGKPLCKFQAISFKLAEMATKIEAARQL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A +E K S +AA A++ + +A V +A++ GG GY EE +AR Sbjct: 299 VYKAAMRKEEKKPYSVDAAMAKM-------YASDIAMEVTTDAVQIFGGYGYSEEYPVAR 351 Query: 433 HYRESPANSILLGSGNAMVL 452 H R++ I G+ A L Sbjct: 352 HMRDAKITQIYEGTNEAQRL 371 >gi|111017325|ref|YP_700297.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110816855|gb|ABG92139.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 396 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 38/284 (13%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 REY P M L+E G+D+AA++++ ++ +DG + +SG K W + Sbjct: 115 REYLPR----MATGDFLSAFALSEPDAGSDVAALSTRARREADG-WRISGQKMWCTFADG 169 Query: 240 SDAFIMLAQVEG--------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 +D + A+ + CF++P+ + P G+ ++ KIG T EL F Sbjct: 170 ADYLQVFARTSPIDRDHRSRGISCFIMPKPRGE-LPPGVTGTPVR-KIGYHGWKTWELSF 227 Query: 292 SNTFGFLLGD---------LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 N + GD V+ G +E +I +A ++ R +L +++ YAR+R Sbjct: 228 DNAYA--AGDSMVGPEGEGFKVAMGDLETARI----HTAARAIGVARGALEDSVAYARQR 281 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + ++ IA +A ++ AA +L +R+ D + + EA+ + KY Sbjct: 282 VQFGRPIGENQAIRFKIAHMATEVEAARSLMYRVCTEVDAGRRNTVEAS-------MVKY 334 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +MA V +EA++ GG+GY + ++ R++R++ I G+ Sbjct: 335 LATEMAERVTSEALQIHGGAGYTTDFAVERYWRDAKLTKIFEGT 378 >gi|94497944|ref|ZP_01304509.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58] gi|94422672|gb|EAT07708.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58] Length = 572 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/340 (22%), Positives = 151/340 (44%), Gaps = 36/340 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIM 245 AP+ + LTE GTD+A + ++ + + DG + ++G K F+SS M+ + Sbjct: 150 APLISGEWTGAMALTESGAGTDLALLKTKAEDLGDGRFAITGQKIFISSGDHDMASNIVH 209 Query: 246 L---------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 L A V+G + FLVP++L D + N + L+ K+G + T + + G Sbjct: 210 LVLARLPDAPAGVKG-ISLFLVPKMLPDDTRNTMSVGALEKKMGIHAQPTCVMNYDGATG 268 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGG-- 347 +L+G+ + + M ++ + ++ + G+ ++ A A + R GG Sbjct: 269 WLVGEPHRG---LAAMFTMMNAERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSSDGGRG 325 Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPI 399 +I+ ++R + + + A AL+ A +D A+ R++ A ++ P+ Sbjct: 326 PVAIIEHADVRRMLLKVRAFVEAGRALAGWTALQWDRAQGHADPAIRADADALVALLTPV 385 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--L 457 K A + GG GYI E + + R++ I G+ +D++ L Sbjct: 386 VKAAFTDFGFESAVAAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVGRKL 445 Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKE 496 G + E+LF +E DL G ++ +R+++ L ++ Sbjct: 446 PMAGGTVVERLFDQIEMDLQKCEGVEMAERVRNALGLFRD 485 >gi|307728456|ref|YP_003905680.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307582991|gb|ADN56389.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 595 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ S + T + LTE GTD+ + ++ + SDG Y Sbjct: 144 TPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFIPNDAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+++G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S ++EA ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADEAVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|148259028|ref|YP_001233155.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|146400709|gb|ABQ29236.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5] Length = 596 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 64/390 (16%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ + VAL + K W P I S ++ T + LTE GT Sbjct: 125 LYPGLSHGAYVALKHSGSDEQKKAWLPNIVSGKWTGT-------------MCLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257 D+ + ++ DG Y ++G+K F+S+ D ++LA+ V+G + FL Sbjct: 172 DLGMLRTKAVPNDDGTYSITGNKIFISAGEHDLAENIVHLVLARLPDAPAGVKG-ISMFL 230 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L EDG+ NG+ +++K+G +AT + F G+L+G+ N + M Sbjct: 231 VPKFLPREDGTLGPRNGMQCTAIEHKMGLNGSATCAMSFDGATGWLVGEPNKGLAAMFKM 290 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK--- 356 L I + V+ A+ YAR R ++G IL+ V + Sbjct: 291 MNTERLSVGIQGLGIAEVAYQNAVAYARERIQGRSLTGTKAPEKQADPILVHPDVRRMLL 350 Query: 357 --RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 RA + +A A + D+ ++ +A +M P+ K + + + Sbjct: 351 TSRAYIEGCRALAGWVARELEILEKSDDGDAKQAADDFASLMTPVVKAMFTDLGFEIASL 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A++ GG GYI + I ++ R++ + G+ LD++ L Q Sbjct: 411 AVQTYGGHGYIRDHGIEQYVRDARIAMLYEGTNGIQALDLVG-------------RKLPQ 457 Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFL 504 D G + + + + I +++ LA FL Sbjct: 458 DGGRLLTRFLDPVLEFIDAHQDNDALAEFL 487 >gi|83311733|ref|YP_421997.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82946574|dbj|BAE51438.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 592 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 40/281 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+AAI ++ D + LSG K F++ ++D I L A Sbjct: 162 MNLTEPQAGSDLAAIRTKAAPEGD-KFRLSGQKIFITYGDHDLADNIIHLVLARLPDAPA 220 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 V+G + F+VP++L DGS N + L++K+G + T + F + G LG+L Sbjct: 221 GVKG-ISLFVVPKMLPDGSRNDVKCVSLEHKLGIHGSPTAVMSFGDHEG-ALGELVGQ-- 276 Query: 308 PVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG----------GILID 351 P ++ + + ++ A ++V +++AE A +YAR R V G ++ Sbjct: 277 PHRGLEYMFVMMNHARLAVGLQGLAIAERAYQQARNYARDR-VQGKPVGWTGSGPASIVH 335 Query: 352 QPVMKRAIADIALDIAAA-----TALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++R + + I A TA +F +A+ E +R E + + PI K WC Sbjct: 336 HPDVRRLLMTMKSGIEAMRGIHYTAAAFSDIAHHHPEPNARYEASQRLEFLTPIAKGWCT 395 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ + + ++ GG GYIEE A+H R++ +I G+ Sbjct: 396 ELGQHIASLGVQVHGGMGYIEETGAAQHLRDARITTIYEGT 436 >gi|170106339|ref|XP_001884381.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82] gi|164640727|gb|EDR04991.1| acyl-CoA dehydrogenase, mitochondrial [Laccaria bicolor S238N-H82] Length = 370 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 39/276 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ +K D + ++G K W +S ++ F++ A ++ G C Sbjct: 114 LSEPASGSDAFALQTRAKKDGDN-WIINGSKMWITNSYEAEIFLIFANIDTTKGYKGITC 172 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FL + + G+ + + K+G R+++T L F + + NV G KI Sbjct: 173 FLATKDM------GIQIAKKEQKLGIRASSTCTLNFDD---LKIPAENVIGGEGRGYKIA 223 Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 I L+ + ++ + LA+ A+ Y +R G QP+ M IA A+ Sbjct: 224 IEILNEGRIGIAAQMLGLAQGAFEKAVPYTYQRQQFG-----QPIGTFQGMAFQIAQAAI 278 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I +A +++ A +E K+ ++EAA A KYW +A V +A+E GG G+ Sbjct: 279 EIESARLMTYNAARRKEEGKTFTKEAAMA-------KYWSSVVAQRVSGQAIEWAGGVGF 331 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E I +++R+S +I G+ N + + ++K Sbjct: 332 TRETGIEKYWRDSKIGAIYEGTSNIQLQTISKFIQK 367 >gi|317419510|emb|CBN81547.1| 'Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial ' [Dicentrarchus labrax] Length = 432 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 28/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ +K D Y ++G K W ++ + F+++A V+ G C Sbjct: 174 LSEAEAGSDAFALKTRAEKHKD-YYIINGSKMWISNAEHAGVFLVMANVDPSAGYRGITC 232 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V D GL + +NK+G R+++T L F N + + N+ K Sbjct: 233 FIV-----DQDTEGLEICKKENKLGLRASSTCPLNFDNV---KVPEKNILGQIGHGYKYA 284 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y R+R G + D M+ IA +A I AA Sbjct: 285 IGMLNEGRIGIAAQMLGLAQGCFDNTIPYTRQRVQFGKRIFDFQGMQHQIAHVATQIEAA 344 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA A KY+C ++A ++ +E +GG G+ ++ Sbjct: 345 RLLTYNAARLKEAGRPFIKEACMA-------KYFCAELATLTTSKCIEWMGGVGFTKDYP 397 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I ++YR+ +I G+ N + + ++K Sbjct: 398 IEKYYRDCKIGTIYEGTTNVQLSTMAKFIDK 428 >gi|15964287|ref|NP_384640.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] gi|307307024|ref|ZP_07586763.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|15073464|emb|CAC45106.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306901964|gb|EFN32563.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 598 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 83/416 (19%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ + + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGLLRTKAVPNGDGSYRISGQKIFISAGEHDMAENVVHLVLARIEGAPDGVKGISLFI 231 Query: 258 VPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ E G NG+ +++K+G NAT + + G+L+G N Sbjct: 232 VPKFKLDASGEPGERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355 + + ++ A ++V +S+AE A YAR R +SG +I P + Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAASYARERIQGRSLSGPKAPDKKADPIIVHPDI 346 Query: 356 KRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R + I TAL +A+ D + R +M PI K Sbjct: 347 RRTLMTIRAFNEGGRAFTLWTALKSDIAHRSDSEEERQTADDILSLMTPILKGVLTDKGF 406 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + GG GYIEE ++++ R++ I G+ LD++ G L Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAM--- 458 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 + G+ V+ + ++ C+E++G EK++ + A + G+ND+ Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRG-----DEKLSGYTKA---LKKGLNDL 498 >gi|225873978|ref|YP_002755437.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] gi|225793527|gb|ACO33617.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] Length = 383 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 35/298 (11%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 W + R+Y P+ T +A L+E G+D A+ ++ + D Y L+G K Sbjct: 103 WGNEQQKRKY-----LPLLATEMAGAYALSEASSGSDAFALQTRAELRGDH-YHLNGQKL 156 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF- 291 W ++ + FI+ A V+ G + L D G + ++K+G R+++T EL F Sbjct: 157 WITNAKEAGVFIVFASVDLAAGYKGITAFLVDRDAPGFSLGKKEDKLGIRASSTCELIFE 216 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR 340 N G + ++ G + + +I + + LA+ A YA+ Sbjct: 217 DCRVPAENVLGEVGKGYKIAIGTLNEGRI---------GIGAQMLGLAQGAWNCAARYAK 267 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + D ++ IA +A++I A L + A D K +EAA A Sbjct: 268 ERKQFGKAIADFQGVQFQIAQMAVEIEATRLLVYNAARLKDAGKDFVKEAAMA------- 320 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 KY+ + A V ++A+E GG G++++ + + YR++ I G+ N + + L+ Sbjct: 321 KYFASQTAERVASQAVEIYGGYGFVKDYPVEKFYRDAKIGKIYEGTSNMQLATIAKLM 378 >gi|149913216|ref|ZP_01901750.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b] gi|149813622|gb|EDM73448.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. AzwK-3b] Length = 576 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 158/346 (45%), Gaps = 61/346 (17%) Query: 151 LMSPSVTSASMVALMTTPRV-----------HKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 +MS + + ++ LMT ++ + + PK+ S E++ T Sbjct: 114 MMSSACLALQIIPLMTQGQIDALEHHASDALKRTYLPKLVSGEWNGT------------- 160 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRV 253 + LTE + G+D+ A+T++ + DG Y ++G K ++S +D ++LA++ +G Sbjct: 161 MNLTEPQAGSDVGALTTRAEPRGDGTYAITGQKIYISWGDNDFTDNVVHLVLARLPDGPP 220 Query: 254 GC-----FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G FLVP+ L D G N L +++K+G + T +++ G+L+G + Sbjct: 221 GTKGISLFLVPKFLPDEHGKPGRANDLKVVGVEHKMGLHGSPTCTMQYDGATGWLVGREH 280 Query: 304 VSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI--LI 350 + M+ + +++A + V G + +AE A+ YA R V GG ++ Sbjct: 281 ------DGMRAMFTMMNNARLGVGGQGIGVAEAALQHALAYATDRKQGRTPVEGGTGAIV 334 Query: 351 DQPVMKRAIADIALDI--AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 D ++R + + DI A A AL+ +A + A + +A A + PI K + Sbjct: 335 DHADVRRMLTTMKADIFAARAIALACAVAIDMETATGAPDWSARAAFLTPIAKAFGTDTG 394 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 V ++ GG G++EE A++ R+ +I G+ +D+ Sbjct: 395 IEVANLGVQVHGGMGFVEETGAAQYLRDVRVTAIYEGTNGIQAMDL 440 >gi|301168211|emb|CBW27800.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Bacteriovorax marinus SJ] Length = 572 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 41/337 (12%) Query: 169 RVHKDW-APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 + KD+ PK+ S E+ T + LTE G+D+ A S + + +G Y Sbjct: 138 KEQKDFFIPKMMSGEWGGT-------------MCLTEPGAGSDVGACKSTAKPLDNGKYA 184 Query: 228 LSGHKWFLSSPMSDAF-----IMLAQV----EGRVG--CFLVPRL-LEDGSPNGLCYQRL 275 +SG K F+SS SD + ++LA+ EG G F+VPR E G N + ++ Sbjct: 185 ISGVKIFISSGESDLYENNIHLVLAKTPGAAEGTKGLSLFIVPRFNTETGESNNVVCTKI 244 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSG-MRVSLA 333 + K+G +AT EL F G +G+L + +M I++ + + G + +LA Sbjct: 245 EEKMGIHGSATCELTFGEN-GECVGELIGEEFEGMANMFIMMNEARLLCGLQGEAQANLA 303 Query: 334 EAI--HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEA 390 + YA+ R G + + P ++R + + AL+ N FD EAK A Sbjct: 304 YMLTEQYAKERAQFGVEICNLPDVRRLLLRMRALSRGMRALTIYTGNLFDKEAKGDEVAA 363 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ PI K +C V +A++ GG G+ E + + R++ SI G+ Sbjct: 364 KEIALLTPICKAYCSDQGFNVSVDAVQVHGGYGFCTEYGVEQFIRDTKIASIYEGTNGIQ 423 Query: 451 VLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 +D + ++ Q + GKK+ I+ Sbjct: 424 AIDFVT---------RKILKDKAQTFFAVGKKIQAIM 451 >gi|187929709|ref|YP_001900196.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|187726599|gb|ACD27764.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] Length = 593 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 38/322 (11%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 APM + + LTE + G+D+AA+ S+ D Y +SG+K F++ D Sbjct: 151 APMVEGRWTGTMNLTEPQAGSDLAALRSRAVHEGD-HYHVSGNKIFITWGEHDMAENIVH 209 Query: 244 IMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF 291 ++LA+ V+G + FL P+ L +DG+ N L +++K+G + T + F Sbjct: 210 LVLARLPDAPPGVKG-ISLFLCPKYLVNDDGTLGERNDLACTSIEHKMGIHGSPTASMSF 268 Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 ++ G+L+G+ + + M L+ + V + A YA R V G Sbjct: 269 GDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGISERAYQRARAYALER-VQGKP 327 Query: 349 LID-------QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARI 395 LI P ++R + D+ A AL++ A D +A+ R++ A + Sbjct: 328 LISGSTAIAGHPDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHADAQERAQAQALVGL 387 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K WC A + ++ ++ GG GY+EE ++H R++ +I G+ D++ Sbjct: 388 LIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGASQHMRDARITTIYEGTTGIQANDLI 447 Query: 456 N--LLEKGTNLFEQLFSTLEQD 475 L +G + L ++ D Sbjct: 448 GRKLAREGGRTLKALLGRIDGD 469 >gi|326402155|ref|YP_004282236.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|325049016|dbj|BAJ79354.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 596 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 64/390 (16%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ + VAL + K W P I S ++ T + LTE GT Sbjct: 125 LYPGLSHGAYVALKHSGSEEQKKAWLPNIVSGKWTGT-------------MCLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257 D+ + ++ DG Y ++G+K F+S+ D ++LA+ V+G + FL Sbjct: 172 DLGMLRTKAVPNDDGTYSITGNKIFISAGEHDLAENIVHLVLARLPDAPAGVKG-ISMFL 230 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L EDG+ NG+ +++K+G +AT + F G+L+G+ N + M Sbjct: 231 VPKFLPREDGTLGPRNGMQCTAIEHKMGLNGSATCAMSFDGATGWLVGEPNKGLAAMFKM 290 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK--- 356 L I + V+ A+ YAR R ++G IL+ V + Sbjct: 291 MNTERLSVGIQGLGIAEVAYQNAVAYARERIQGRSLTGTKAPEKQADPILVHPDVRRMLL 350 Query: 357 --RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 RA + +A A + D+ ++ +A +M P+ K + + + Sbjct: 351 TSRAYIEGCRALAGWVARELEILEKSDDGDAKQAADDFASLMTPVVKAMFTDLGFEIASL 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A++ GG GYI + I ++ R++ + G+ LD++ L Q Sbjct: 411 AVQTYGGHGYIRDHGIEQYVRDARIAMLYEGTNGIQALDLVG-------------RKLPQ 457 Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFL 504 D G + + + + I +++ LA FL Sbjct: 458 DGGRLLTRFLDPVLEFIDAHQDNDALAEFL 487 >gi|118589350|ref|ZP_01546756.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] gi|118438050|gb|EAV44685.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] Length = 598 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 179/424 (42%), Gaps = 75/424 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL T + + P + + + T + LTE GT Sbjct: 126 MYPGLTAGAVAALTIHGTDEQKQTYLPNMIAGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ I ++ +DG Y ++G K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGLIRTKAVPQADGSYKITGTKIFISAGQHDMAENIIHLVLARIEGAPEGTKGISLFVV 232 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 PR + +DG+ NG+ +++K+G NAT + + + G+L+G+ N + M Sbjct: 233 PRNAIGDDGTVGDNNGVSCGSIEHKMGIHGNATCVMNYDDATGWLVGEENKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP--------------VM 355 L A+ +S V+ A+ YA+ R ++G D+P + Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVTYAKDRIQGRALTGPKAPDKPADPIIVHPDVRRTLMQ 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 R+ + A + TAL +++ D+ KS+ +M P+ K A A Sbjct: 353 IRSFNEAARALIIWTALHGDVSHRSDDEKSKQFSDDMMGLMTPVLKGVLTDTGFANAVNA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GYI E + + R++ I G+ LD++ G L Sbjct: 413 QQLYGGHGYISEWGMEQFVRDARIAMIYEGANGIQALDLV-----GRKL----------- 456 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI--ADVFLENR 533 + G+ V++ + + KE+K + ALA+ A L + GM+D+ A ++ N Sbjct: 457 PANGGRAVMSFFNEVNTFLKENK-------DNEALAAFTAPL-KKGMDDLQAATMWFMNN 508 Query: 534 FLDN 537 + N Sbjct: 509 AMKN 512 >gi|170752125|ref|YP_001758385.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170658647|gb|ACB27702.1| acyl-CoA dehydrogenase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 595 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 96/425 (22%), Positives = 171/425 (40%), Gaps = 82/425 (19%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T +M AL+ + + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAMAALLVHGSEEQKALYLPKMVEGAWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y ++G K F+S+ D +++A++EG + F+V Sbjct: 173 DLGLLKTKAVPNGDGSYSITGTKIFISAGEHDLAENIVHLVIARIEGAPAGTKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ NG+ L++K+G NAT + + G+L+G N + M Sbjct: 233 PKFLVNADGSLGARNGVSCGSLEHKMGIHGNATCVMNYDGATGWLVGQENRGLNAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L + + V+ A YA+ R + +I P ++R + Sbjct: 293 NEARLAVGVQGLGQSEVAYQNAAAYAKDRLQGRALTGAKAPEKAADPIIVHPDVRRTLMQ 352 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + AA TAL + + ++AK R + +M P+ K A EA Sbjct: 353 IRAFNEAARALMLWTALQADILHRSEDAKERQAADDHLGLMTPVVKGVFTDRGFANAVEA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + +GG GYIEE +++ R++ I G+ +D++ L +D Sbjct: 413 QQLLGGHGYIEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459 Query: 476 LGSSGKKVITILRDSISLCK---EDKGLARFLTEKIALASSAAALYRAGMNDIADV---F 529 G+ ++T L + + K ED +A F +AG+ND+ Sbjct: 460 ---GGRAMMTFLGEVQTFLKDHGEDPAMAPFTKP-----------LQAGLNDLQGAVMWL 505 Query: 530 LENRF 534 ++N F Sbjct: 506 MQNAF 510 >gi|83941290|ref|ZP_00953752.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36] gi|83847110|gb|EAP84985.1| acyl-CoA dehydrogenase family protein [Sulfitobacter sp. EE-36] Length = 593 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE GTD+ + ++ DG Y ++G K F+SS M+D I +LA++EG Sbjct: 161 MNLTEPHCGTDLGLMRTKAAPQEDGSYKITGQKIFISSGEHDMADNIIHLVLAKIEGGPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + EDGS N + ++ K+G N+T + + G+LLGD + Sbjct: 221 GIKGVSLFIVPKFMVKEDGSLGARNAVSVGSIEEKMGIHGNSTCVMNYDGAVGYLLGDEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351 + M + + ++ V+ A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARVGVGMQGLAQADVAYQNALAYAKDRLQGRAVTGTEHPDKPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409 P ++R++ + + A A A+ D A ++ A +M P+ K + + Sbjct: 341 HPDIRRSLMEQKSFVEGARAFILWGASLIDAAHRADDKDADGLVSLMTPVIKGFLTDIGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 DMTVKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447 >gi|218778890|ref|YP_002430208.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760274|gb|ACL02740.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 602 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 39/350 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ + DG Y +SG K F+S +++ I +LA++EG Sbjct: 163 LTEPEAGSDVGALTTTAKPNGDGTYSISGTKIFISGGEHDLTENIIHPVLARIEGAPAGT 222 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F VP++ +DGS N + R++ K+G + T L G LLG+ Sbjct: 223 AGISLFAVPKIWVNDDGSLGEDNDVVCDRIEEKMGIHGSCTCVLTLGGKGKCKGTLLGEE 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------------I 350 N + M L + S + A+ Y R+R +L I Sbjct: 283 NKGMRAMFQMMNEARLGVGLQGFSMASCAYMYALDYTRQRKQGKNLLEFANPDAQSVTII 342 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 + P ++R + + I + + + N FD+ K+ E + ++ P+ K +C Sbjct: 343 NHPDVRRMLMTMKAYIDGMRSFLYFVGNCFDKHKTAGNEEEAEKYMNLIEVLIPVIKAYC 402 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGT 462 A V + A++ GG GY +E + + R++ I G+ +D+L L KG Sbjct: 403 TDRAFDVCSLAVQSYGGYGYTKEYPVEQLLRDTKITCIYEGTNGIQAMDLLGRKLGMKGG 462 Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 F +L + Q + + + + L + G L K A++ Sbjct: 463 KPFMELMGVMMQTVAEAKEAGLEDLAAKVEAAVNGAGEIAMLMGKTAMSE 512 >gi|254247246|ref|ZP_04940567.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124872022|gb|EAY63738.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 595 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271 +SG K F+SS MS I L Q + F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454 >gi|315182695|gb|ADT89608.1| hypothetical acyl-CoA dehydrogenase [Vibrio furnissii NCTC 11218] Length = 384 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 36/315 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T + PK+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFATADAKAQFCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K+SDG Y LSG K F+S +D +++A+ G G + + +G+ Y R + Sbjct: 140 ATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVVPAQADGITYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F LLG+ G MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRSVTFDKVHVPASALLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D + Sbjct: 256 LNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKLDRGDPQ----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V A++ GG GYI+E + RH+R+ + IL G+ M Sbjct: 311 -ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369 Query: 452 LDVL-NLLEKGTNLF 465 L V LL G L Sbjct: 370 LIVARRLLSDGGELL 384 >gi|289582756|ref|YP_003481222.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289532309|gb|ADD06660.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 383 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 131/259 (50%), Gaps = 24/259 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRV 253 G ++E G+D+++++++ +K D + ++G+K W + + D F++L + +GR Sbjct: 121 GAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGTVGDFFVVLCKTNPDAQGRY 179 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDM 312 F +++ + +G +++ K+G R++ T EL F + + + N V T M Sbjct: 180 NGF--SQIIVESDRDGFSAEKITGKLGIRASDTAELVFDDV---RVPEENLVGTKDAAFM 234 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + + D +V+ V +A+ A+ YA+ R G + + ++ +A++A D Sbjct: 235 QQMQFFDETRTAVAAQGVGIAKGATRAALEYAQDREQFGQSISEFQAIQHKLAEMATDTE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L+++ A + D+ ++ +A + K + ++A V EA++ GG+GY+ + Sbjct: 295 AARNLTYKAAWNVDQGNDITK-------LASMAKEYASRIAVDVADEAVQIHGGAGYVND 347 Query: 428 RSIARHYRESPANSILLGS 446 + R YR++ I G+ Sbjct: 348 FPVERLYRDAKITQIYEGT 366 >gi|239817691|ref|YP_002946601.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239804268|gb|ACS21335.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 376 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255 LTE + G+D +++ + +K DG Y + G K F++S + ++ V G+ G Sbjct: 123 LTEPQAGSDASSLRTTARKDGDG-YVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308 F+VP G RL++K+G S+ T ++ F N G ++ G Sbjct: 182 FIVPT-----DAPGYSVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGA 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I S M+ S V+LA YA+ R GG + DQ + +A+ A + A Sbjct: 237 LEGGRIGIAAQSVGMARSAFDVALA----YAKERQAFGGAIFDQQAVGFRLAECATQLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A+ D + +EAA A++ A +MA V + A++ +GG GY+ + Sbjct: 293 ARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAIQTLGGYGYVNDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PLERIYRDVRVCQIYEGTSD 365 >gi|170693737|ref|ZP_02884895.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170141519|gb|EDT09689.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 596 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 59/373 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAENIAHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLINEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358 M I++ + + G+ VS A A + R V G +I+ P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVGVSDRAYQKAAAYAKERVQSRPVDGSAKQPVAIIEHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + A+ AL++ A D EAK R+E A + PI K W + + V Sbjct: 348 LSTMRALTEASRALAYVAAGHCDIAHRHPDEAK-RAEHQAIYEFLVPIVKGWSTESSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469 + ++ GG G+IEE A++YR++ I G+ D++ + G + + L Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLL 466 Query: 470 STLEQDLGSSGKK 482 +++ + +G G + Sbjct: 467 ASVAETVGLLGAQ 479 >gi|13474682|ref|NP_106251.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] gi|14025437|dbj|BAB52037.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] Length = 596 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 93/412 (22%), Positives = 166/412 (40%), Gaps = 75/412 (18%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++T T W PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ + ++ +G Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGLLRTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFI 231 Query: 258 VPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ D G+P N L ++ K+G N+T + + G LLG+ N + M Sbjct: 232 VPKFKLDASGNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKR--- 357 L + +S ++ A+ YA+ R +SG D+ P ++R Sbjct: 292 MNEARLGVGLQGLSLSEIAYQNAVAYAKDRLQGRSLSGAKAPDKKADPIIVHPDIRRSLM 351 Query: 358 ---AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 A + +A TA+ +A+ + K R Y +M P+ K Sbjct: 352 TMKAFNEAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVM 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A + GG GYIEE +++ R++ I G+ LD++ + Sbjct: 412 AQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVG-----------------R 454 Query: 475 DLGSSGKKVI-TILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 LG +G + I ++ C+E++ EK+A + + G+ND+ Sbjct: 455 KLGLNGGRAIQAFFKEVGEFCEENRA-----DEKMAPFTKG---LKKGLNDL 498 >gi|86750378|ref|YP_486874.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86573406|gb|ABD07963.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 379 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + + ++ D Y ++G K F++S M +I A G G V Sbjct: 125 LAITEPSGGSDVANLRTSAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGEGPGGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL G GL +LK K+G ++ T L F N G LLG M I++ Sbjct: 184 LLLIPGDTPGLTRTQLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGF-----MIIMM 237 Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S ++ ++ +V L EA YA++R G L V++ + D+A IAA+ A Sbjct: 238 NFNSERLTMAAGCIAASKVCLDEATAYAKQRVTFGKPLTKHQVIRHKLVDMAQRIAASQA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA ++ +S E + A T +C +EA++ GG+G++ + Sbjct: 298 MLELLAWRVEQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGFMRGVKVE 350 Query: 432 RHYRESPANSILLGSGNAM 450 R YRE N+I G+ M Sbjct: 351 RIYREVKVNAIGGGTEEIM 369 >gi|260770186|ref|ZP_05879119.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972] gi|260615524|gb|EEX40710.1| branched-chain acyl-CoA dehydrogenase [Vibrio furnissii CIP 102972] Length = 384 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 36/315 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T + PK+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFATAEAKAQFCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K+SDG Y LSG K F+S +D +++A+ G G + + +G+ Y R + Sbjct: 140 ATKVSDG-YLLSGSKTFISGAGDTDVLVVMART-GEAGPKGISAFVVPAQADGITYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F LLG+ G MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRSVTFDKVHVPASALLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D + Sbjct: 256 LNQATQYLQERKQFGQSLAQFQGLQFKLADMATELVAARQLVRYAASKLDRGDPQ----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V A++ GG GYI+E + RH+R+ + IL G+ M Sbjct: 311 -ATAYCAMAKRFATDVGFQVCDAALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369 Query: 452 LDVL-NLLEKGTNLF 465 L V LL G L Sbjct: 370 LIVARRLLSDGGALL 384 >gi|260549873|ref|ZP_05824089.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] gi|260407123|gb|EEX00600.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] Length = 607 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AA+ PI K + ++ Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456 >gi|237785180|ref|YP_002905885.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] gi|237758092|gb|ACR17342.1| acyl-CoA dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] Length = 391 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 17/269 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 + +TE G D+A I + +K +DG Y ++G K F+S+ + F ++ V +GR G Sbjct: 130 IAMTEPGAGADLAGIRTLAKKDADGNYIVNGAKTFISNGVQADFTIIVAVTDPEKGRAGV 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 L+ ++EDG LK K+G ++ T EL F N LLG+ G + Sbjct: 190 SLL--IVEDGMEGYTKTGPLK-KVGLKAQDTAELSFENVTVPAENLLGEEGAGFGYLRHN 246 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ SV+ R + +++ R G L+D +A++A I AA + Sbjct: 247 LAQERLSIAVGSVATSRRAFDLVYQHSQDRKTFGKRLVDHQAYGWMLAEMATKIQAAQSF 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ EAK + E A + K+W + V+ A++ GG G++ E IA Sbjct: 307 ----VDACIEAKVKGE---LDETTAAMAKWWTTDLQVEVVNNALQMHGGYGFMMEYPIAT 359 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461 HY ++ I G M + L KG Sbjct: 360 HYLDTRVQPIYGGPNEIMKEIIARRLAKG 388 >gi|124009420|ref|ZP_01694097.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Microscilla marina ATCC 23134] gi|123984968|gb|EAY24926.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Microscilla marina ATCC 23134] Length = 604 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 51/371 (13%) Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFS 180 SFE ++ + AA +M+ G +M +T SA ++A + + + + K+ S Sbjct: 96 SFEHGGQQLPQMVTAASGAIMSAANNGVVMFTGLTAGSAHLIASFGSKELKEKYTGKMLS 155 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 E+ T + LTE + G+ ++ I S G Y L G K F+SS Sbjct: 156 SEWQGT-------------MALTEPQAGSSLSDIVSSATPTDQGHYKLKGQKIFISSGDY 202 Query: 241 DA-----FIMLAQVEGR------VGCFLVPRLLEDGS----PNGLCYQRLKNKIGNRSNA 285 + +MLA+++G + F+VP+L ED + N + + +K+G +S Sbjct: 203 EGTENVVHLMLARIDGAPLGTKGISLFVVPKLREDENGNLIDNDVTTAGVYHKMGQKSTP 262 Query: 286 TVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 V + N G+L+G+ N + M L +M + + ++ YA R Sbjct: 263 AVHYIAGDNDNCHGWLVGEPNKGLSYMFQMMNEARLGVGLMGAAIASAAYYASLEYANER 322 Query: 343 HVSGGI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 I +I+ +KR + + +L F + D + +E Sbjct: 323 PQGRKISEQSAKDKPQTFIINHADVKRMLLFQKSVVEGGLSLIFECSRYADLEMTTEDET 382 Query: 391 AYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A R ++ P+ K + + ++E M+C+GG GY + + +HYR+ SI Sbjct: 383 ARKRYKGLLDLLTPVAKTFPAEYGIKSVSEGMQCLGGFGYTTDFPLEQHYRDIRITSIYE 442 Query: 445 GSGNAMVLDVL 455 G+ LD+L Sbjct: 443 GTTGIQSLDLL 453 >gi|126643126|ref|YP_001086110.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 567 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 86 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 132 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 133 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 192 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 193 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 252 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 253 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 312 Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AA+ PI K + ++ Sbjct: 313 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 372 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 373 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 416 >gi|134296918|ref|YP_001120653.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134140075|gb|ABO55818.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 595 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLC 271 +SG K F+SS D ++LA++ +G G F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIVHLVLARLPDAPQGTKGISLFIVPKFIPDASGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454 >gi|169632319|ref|YP_001706055.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|184159630|ref|YP_001847969.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|239503267|ref|ZP_04662577.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] gi|332876115|ref|ZP_08443899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|169151111|emb|CAO99775.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii] gi|183211224|gb|ACC58622.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|322509540|gb|ADX04994.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323519560|gb|ADX93941.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332735733|gb|EGJ66776.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 607 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTAEGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AA+ PI K + ++ Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456 >gi|169794563|ref|YP_001712356.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213158866|ref|YP_002320864.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215482151|ref|YP_002324333.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|260556995|ref|ZP_05829212.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter baumannii ATCC 19606] gi|332856626|ref|ZP_08436235.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332868656|ref|ZP_08438303.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|169147490|emb|CAM85351.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|193078500|gb|ABO13508.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] gi|213058026|gb|ACJ42928.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213988651|gb|ACJ58950.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|260409601|gb|EEX02902.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter baumannii ATCC 19606] gi|332727019|gb|EGJ58509.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332733228|gb|EGJ64423.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 607 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AA+ PI K + ++ Sbjct: 353 QKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIG 456 >gi|113866489|ref|YP_724978.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113525265|emb|CAJ91610.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 595 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 59/346 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP + + + PK+ S + T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGRVG------CFLV 258 D+ + S+ + +DG Y +SG K F+S+ D ++LA++ G F+V Sbjct: 174 DLGILRSKAEPQADGSYLISGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVV 233 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+P NG+ +++K+G NAT + G+++G+ N Sbjct: 234 PKFIPDANGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353 + + +++A + V + L E ++ YA+ R ++G D+P Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSLAYAKDRLQMRALTGPKAPDKPADPIIVHPDVR 348 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + ++A A+ + TAL S + R + ++ P+ K + A Sbjct: 349 RMLLTQKAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 409 STNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQALDLLG 454 >gi|239834346|ref|ZP_04682674.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822409|gb|EEQ93978.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 656 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 185 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 231 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + DG Y +SG K F+S+ MS+ I +LA+++G + F+V Sbjct: 232 DLGLLRTSATPQEDGSYKISGQKIFISAGEHDMSENIIHLVLARIDGAPEGVKGISLFIV 291 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G NAT + + G+L+G+ + + M Sbjct: 292 PKFILDENGNPGERNGVSCGSIEEKMGIHGNATCVMNYDEAKGYLIGEAHKGLRAMFTMM 351 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361 L A+ +S + A+ YAR R +SG D+ P ++R + + Sbjct: 352 NEARLGVALQGLSIAETAYQNAVIYARERIQGRALSGAAAPDKKADPIIVHPDIRRNLMN 411 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEA 415 I A AL A + D A +EA ++ P+ K A Sbjct: 412 IRAFNEAGRALILWTALNSDIAHRSGDEAERQTADDLVGLLTPVLKGVLTDKGFEHAVMA 471 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 472 QQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 511 >gi|323136899|ref|ZP_08071979.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] gi|322397660|gb|EFY00182.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] Length = 597 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 149/341 (43%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+T + + +APK+ + T + LTE + GT Sbjct: 126 MYPGLTQGALAALLTHGSDEQKRLYAPKMTEGRWTGT-------------MNLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ +T++ +DG Y ++G K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGLLTTKAVPRADGSYSITGQKIFISAGEHDLAENIIHLVLARIEGAPAGVKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P++L + G+ NG+ ++ K+G NAT + + GFL+G+ N + M Sbjct: 233 PKILVNPDGSLGARNGVACGSIEEKMGIHGNATCVMNYDGAQGFLVGEANRGLNAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIAD 361 L A+ +S V+ A+ YAR R + +I P ++R + + Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVAYARERLQGRALTGPKNPGKNADPIIVHPDIRRMLLE 352 Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A +A A AL +A+ D+ +R ++ P+ K + +A Sbjct: 353 IRSFNEAARGLALAAALDSDIAHRSDDPAARQAAEDRLGLLTPVLKGVFTDVGFDNAVKA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI E + + R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIREWGMEQFVRDARIAMIYEGANGIQALDLVG 453 >gi|160898202|ref|YP_001563784.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160363786|gb|ABX35399.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 596 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 45/294 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + G+D+ + SQ + DG Y L G K F+S MS+ + L A Sbjct: 172 LTEPQAGSDLGLLRSQARPRGDGSYSLDGSKIFISGGDQDMSENIVHLVLARLPDAPAGT 231 Query: 250 EGRVGCFLVPR-LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G + FL PR + +DG PN + ++ K+G + +AT + F +L+G + Sbjct: 232 RG-LSLFLAPRGIPQDGGGFLPNAIHCDGIEKKMGIKGSATCAMRFEGAQAWLVGQPHQG 290 Query: 306 TGPVEDMKILIYLDSAIMSV-------SGMRVSLAEAIHYARRRHVSGGILID------- 351 + + ++SA + V + M LA A RR+ + D Sbjct: 291 LA-----AMFVMMNSARLHVGLQGLGHAEMAWQLARAYAAERRQMRAQPRPADAQGPADP 345 Query: 352 ---QPVMKRAIADIAL------DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 QP ++R +AD+ + IA A LA +A+ R++ A A ++ P+ K Sbjct: 346 IALQPAVQRMLADLRVWTEGMRAIAGWVAHQLDLAEQAPDAEERAQAHALASLLTPVVKS 405 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + A+ +EA++ GG GY+ E I + R++ I G+ LD+L Sbjct: 406 FFTERGFALASEALQVFGGYGYVHEYRIEQTLRDARIAMIYEGTNQIQALDLLQ 459 >gi|327190780|gb|EGE57849.1| acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512] Length = 598 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 51/343 (14%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ T + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILVHGTQEQKQTYLPKMVDGSWSGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ + ++ +DG Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISLFI 231 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L EDG+P N + +++K+G NAT + + GFL+G N + M Sbjct: 232 VPKFLVGEDGAPGTRNAVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMFVM 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----GI---------LIDQPVMKRAI 359 L + ++ ++ A YAR R + G G+ +I P ++R + Sbjct: 292 MNEARLMVGLQGIAISEIAYQNAAAYARDR-IQGRALSGVKAPDKKADPIIVHPDIRRTL 350 Query: 360 ADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 I A + A TAL +A+ + K R ++ PI K Sbjct: 351 MTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPILKGVMTDKGFDHAV 410 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 411 MAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453 >gi|107023656|ref|YP_621983.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116690741|ref|YP_836364.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|170734083|ref|YP_001766030.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|206559277|ref|YP_002230038.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Burkholderia cenocepacia J2315] gi|105893845|gb|ABF77010.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116648830|gb|ABK09471.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] gi|169817325|gb|ACA91908.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] gi|198035315|emb|CAR51190.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Burkholderia cenocepacia J2315] Length = 595 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 47/323 (14%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 145 PELQQQYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSYS 191 Query: 228 LSGHKWFLSS---PMSDAFIMLA--------QVEGRVGCFLVPRLLED-----GSPNGLC 271 +SG K F+SS MS I L Q + F+VP+ + D G NG+ Sbjct: 192 ISGTKIFISSGEHDMSKNIIHLVLARLPDAPQGTKGISLFIVPKFIPDAAGEPGERNGIK 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G N+T + G+++G+ N + M L + + V+ Sbjct: 252 CGSIEHKMGIHGNSTCVMNLDGAKGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVA 311 Query: 332 LAEAIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 ++ YA+ R ++G D+P + ++A A+ A +AL Sbjct: 312 YQNSLTYAKERLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSALQ 371 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 S + R E A ++ PI K + A AM+ GG G+I E + ++ Sbjct: 372 IDKELSHADEAVRKEAADLVALLTPIIKAFLTDNAFESTNHAMQIYGGHGFISEWGMEQY 431 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ N I G+ + LD+L Sbjct: 432 VRDARINMIYEGTNSIQSLDLLG 454 >gi|148252257|ref|YP_001236842.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146404430|gb|ABQ32936.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 379 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 23/317 (7%) Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 ++++A E + V+++ M + P + + P++ +R P A + +++AI Sbjct: 70 MHIVASQELARAGAGGVSASLMSHSIGAPPIARAARPEVRARVL-PEILAGRKISALAI- 127 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 TE GG+D+A + ++ + D Y +SG K F++S M +I +A G G V Sbjct: 128 ---TEPSGGSDVANLRTKAVRDGDH-YVVSGEKTFITSGMRADYITVAVRTGGPGPSGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-L 318 LL G GL +L NK+G ++ T L F G + N+ + K++++ Sbjct: 184 LLLVPGDTPGLTRTKL-NKMGWWASDTATLHFD---GCRVPIENLIGEEGQGFKLIMHNF 239 Query: 319 DSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +S M ++ RV L +AI YA+ RH G L V++ + D+A +AA+ A+ Sbjct: 240 NSERMGMAASCTAFARVCLEDAIAYAKERHTFGKPLAQHQVIRHKLVDMAQRVAASQAML 299 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 LA ++ + E + A T CC +EA++ GG+G++ + R Sbjct: 300 EMLAWRLEQGDNPVAEICMMKNQATQTMA-CCA------SEAVQIFGGAGFMRGIRVERI 352 Query: 434 YRESPANSILLGSGNAM 450 YRE N+I G+ M Sbjct: 353 YREVKVNAIGGGTEEIM 369 >gi|146343641|ref|YP_001208689.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146196447|emb|CAL80474.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 379 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 38/371 (10%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE- 147 P WD+ P L ++ GL + F V Q +I +++ A + Sbjct: 28 PFANAWDEAGEFP--RTLYTKAAEIGLLGLGFPEEFGGVAADQFMRIVSSQELARAGIGG 85 Query: 148 -AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 + LMS S+ A +A P V P+I S +K S L +TE Sbjct: 86 VSASLMSHSI-GAPPIARAARPEVRAKVLPEILSG----------RKISA---LAITEPS 131 Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 GG+D+A + ++ + DG Y +SG K F++S + +I +A G G V LL G Sbjct: 132 GGSDVANLRTKA--VRDGNHYVVSGEKTFITSGVRADYITVAVRTGGPGPAGVSLLLIPG 189 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324 GL RL NK+G ++ T L F N + N+ + K++++ +S M Sbjct: 190 DTPGLTRTRL-NKMGWWASDTATLHFDNC---RVPAENLIGEEGQGFKLIMHNFNSERMG 245 Query: 325 VSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 ++ RV L +AI YA+ R G L V++ + D+A +AA+ A+ LA Sbjct: 246 MAASCTAFARVCLDDAIAYAKERQTFGKPLAQHQVIRHKLVDMAQRVAASQAMLEMLAWR 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ + E + A T +C +EA++ GG+G++ + R YRE Sbjct: 306 LEQGDNPVAEICMMKNQATQTMAYCA-------SEAVQIFGGAGFMRGVRVERIYREVKV 358 Query: 440 NSILLGSGNAM 450 N+I G+ M Sbjct: 359 NAIGGGTEEIM 369 >gi|126740571|ref|ZP_01756258.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6] gi|126718372|gb|EBA15087.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. SK209-2-6] Length = 566 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 34/301 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ S+ DG + +SG K F+ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALASKAVPNGDGTFAVSGQKIFI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA+ V G G FLVP+ + D G N L L++K+ Sbjct: 197 SWGDNDFAGNVCHLVLARLPDGVPGTKGISLFLVPKYIPDESGDPGEANSLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T ++F G+L+G + + M L V + +A+ YA Sbjct: 257 GLHGSPTCVMQFDGAKGWLVGPEHGGMAAMFTMMNNARLGVGGQGVGVAEGAYQQALTYA 316 Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R G + D ++R + ++ D A+ A+ A++ D A +E A A Sbjct: 317 TERKQGKTPSGFIADHADVRRMLMEMKADTYASRAILLACAHAIDMHTATGDAEWKARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI K + + V ++ GG G+IEE A+ R+ +I G+ +D+ Sbjct: 377 FLTPIAKAFGTETGNRVADTGVQVHGGMGFIEETGAAQFLRDVRVTAIYEGTNGIQAMDL 436 Query: 455 L 455 + Sbjct: 437 V 437 >gi|297564353|ref|YP_003683326.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848802|gb|ADH70820.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 605 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 53/349 (15%) Query: 147 EAGHLMSPS--VTSASMVALMTTPRVHKDWA-PKIFSREYDPTNKAPMQKTSVAIGLG-- 201 E G L +P V SA+ + L + P VH A P S + N+ + +AI G Sbjct: 100 ELGGLGAPRSLVWSAAELILGSNPAVHMYSAGPGFASILHSEGNEEQKRFAELAIERGWG 159 Query: 202 ----LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR 252 LTE G+D+ A ++ DG + + G K F++S D ++LA+ EG Sbjct: 160 ATMVLTEPDAGSDVGAGRTKAVDQGDGTWHIEGVKRFITSAEQDMTENIFHLVLARPEGA 219 Query: 253 ------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298 + FLVP+ L EDGSP NG +++K+G +++ T EL F + G+L Sbjct: 220 GPGTKGLSLFLVPKYLINEDGSPGERNGAYVTNVEHKMGLKASTTCELTFGDKHPAIGYL 279 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGG-------- 347 +GD + + M ++I ++ +++ + A+ YA+ R V G Sbjct: 280 VGDKHDG---IRQMFLVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGNDLAAGKDS 335 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMA 397 + P ++R++ + A AL A D + +E A ++ Sbjct: 336 PKVTITHHPDVRRSLMTQKSYVEAMRALVLYTATQQDAIQIAHRTGQDATELEAMNDLLL 395 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 PI K + + A++AE+++ +GGSG+++E I ++ R++ +++ G+ Sbjct: 396 PIVKGVGSERSYALLAESLQTLGGSGFLQEYPIEQYIRDAKIDTLYEGT 444 >gi|218532360|ref|YP_002423176.1| acyl-CoA dehydrogenase domain protein [Methylobacterium chloromethanicum CM4] gi|218524663|gb|ACK85248.1| acyl-CoA dehydrogenase domain protein [Methylobacterium chloromethanicum CM4] Length = 587 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++A+ ++ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DGS N L +++K+G ++ T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGTPEPVSAIVAHADIQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AA+ + + A D A +AA+ R ++ P+ K + +A V + Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470 ++ GG G++EE A+ R++ I G+ +D++ L G + Q+ S Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457 >gi|89055461|ref|YP_510912.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1] gi|88865010|gb|ABD55887.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1] Length = 591 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 93/377 (24%), Positives = 156/377 (41%), Gaps = 58/377 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ + ++ + DG Y +SG K Sbjct: 148 YLPKMVSCEWTGT-------------MNLTEPHCGTDLGLMRTKAEPQGDGSYKISGQKI 194 Query: 234 FLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F+S+ MSD I +L ++ G V F+VP+ L +DGS NG+ +++ Sbjct: 195 FISAGEHDMSDNIIHLVLGKITGGPEGIKGVSLFIVPKFLVNDDGSLGARNGVSCGKIEE 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G N+T + + G+LLG+ + + M L + VS V+ A+ Sbjct: 255 KMGIHGNSTCVMNYDEATGYLLGEDHKGMRAMFTMMNEARLGVGMQGVSQAEVAYQNALE 314 Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA+ R V+G LI P ++R + + A A ++ D A Sbjct: 315 YAKDRLQGRDVTGIKNPDGPADPLIVHPDIRRNLMEQKSFAEGARAFLLWGSSLIDAAHR 374 Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 ++ A I + P+ K + + +A + GG GYIEE +++ R++ I Sbjct: 375 GDDKDADGLISLLTPVIKGFLTDKGFDMAVQAQQVYGGHGYIEEWGMSQFARDARIAMIY 434 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 G+ LD++ L QD G +++ E G+ F Sbjct: 435 EGANGVQALDLVG-------------RKLAQDGGKHVMAFFDLVKGFAKDNAEVDGMGEF 481 Query: 504 LTEKIALASS--AAALY 518 LT A + AAA+Y Sbjct: 482 LTPLKAASKDLQAAAMY 498 >gi|296160996|ref|ZP_06843807.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295888695|gb|EFG68502.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 595 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ + + T + LTE GTD+ + ++ + SDG Y Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+L+G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLVYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|56697753|ref|YP_168123.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56679490|gb|AAV96156.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 593 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 59/372 (15%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +AS + T + PK+ S E+ T + LTE GTD+ + ++ Sbjct: 132 AASAILAHGTDAQKDTYLPKMVSCEWTGT-------------MNLTEPHCGTDLGMMRTK 178 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--ED 264 + DG Y ++G K F+SS M+D + +LA++ G V F+VP+ + ED Sbjct: 179 AEPQGDGSYKITGQKIFISSGDHDMADNIVHLVLAKITGGPEGIKGVSLFIVPKFMVNED 238 Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSA 321 G+ N + +++ K+G N+T + + G+LLG+ + + M L Sbjct: 239 GTLGARNAVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEHKGMRAMFTMMNEARLGVG 298 Query: 322 IMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIADIALDIAAA 369 + ++ + A+ YA+ R V+G LI P ++R + D A Sbjct: 299 MQGLAQADAAYQNALEYAKDRLQGRDVTGVKNPEGPADPLIVHPDIRRNLMDQKSFTEGA 358 Query: 370 TALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A D A ++ A ++ P+ K + + +A + GG GYIEE Sbjct: 359 RAFLLWGATLIDAAHRAGDKDADGLVSLLTPVIKGFLSDQGYDMTVQAQQVYGGHGYIEE 418 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 ++++ R++ I G+ LD++ L D GK V+ Sbjct: 419 WGMSQYTRDARIAMIYEGANGVQALDLVG-------------RKLAAD---GGKHVMAFF 462 Query: 488 RDSISLCKEDKG 499 S CKE+ G Sbjct: 463 ELVKSFCKENAG 474 >gi|209521640|ref|ZP_03270334.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209497918|gb|EDZ98079.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 600 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 153/325 (47%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + + PK+ S + T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEELKQRYVPKMISGVWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++ + S+ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLSLVRSRAEPQGDGSYRIFGTKIFITWGEHDMTENIVHLVLARTPSAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGQLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + V G+ +S +A+ YA+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFAVGVQGVAISDRAYQQAVAYAKERVQSRPVDGSAKQSVTIIQHPDVRRM 347 Query: 359 IADIALDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ + A AL++ LA+ + +R+ A + PI K W +M+ V Sbjct: 348 LSTMRALTEGARALAYVSAAHCDLAHRHPDELTRANHQAIYEYLVPIVKGWSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|91779709|ref|YP_554917.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91692369|gb|ABE35567.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 595 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 123 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT-------------MNLTEPQAGS 169 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + L G K F++ D A ++LA+ EG G F+V Sbjct: 170 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 229 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 230 PKFLVNKDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 286 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YA+ R S + +I P ++R Sbjct: 287 YMFIMMNAARFAVGMQGVGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRM 346 Query: 359 IADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +A + A+ AL++ A D + +R+E A + PI K W +++ V Sbjct: 347 LATMRGLTEASRALAYVAAAHCDIAHRHADEATRAEHQAIYEYLVPIVKGWSTELSIDVT 406 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 SLGVQVHGGMGFIEETGAAQYYRDA 431 >gi|47205322|emb|CAF95757.1| unnamed protein product [Tetraodon nigroviridis] Length = 383 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 28/279 (10%) Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252 T V L+E G+D ++ ++ +K D Y ++G K W ++ + F+++A V+ Sbjct: 118 TDVIGSFCLSESEAGSDAFSLKTRAEKHKD-YYVINGSKMWISNAEHAGVFLVMANVDPS 176 Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 G CF+V R E GL + +NK+G R+++T L F N + + N+ Sbjct: 177 AGYKGITCFIVDRDTE-----GLEICKKENKLGLRASSTCPLNFDNV---KVPEKNILGQ 228 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + K I L+ + ++ + LA+ AI Y R+R G + D M+ IA Sbjct: 229 VGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDHAIPYTRQRSQFGKRIFDFQGMQHQIAH 288 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I AA L++ A + + +EA A KY+ ++A ++ +E +GG Sbjct: 289 VATQIEAARLLTYNAARLKEAGRPFIKEACMA-------KYFSAEIATLTTSKCIEWMGG 341 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ ++ I ++YR+ +I G+ N + + +++K Sbjct: 342 VGFTKDYPIEKYYRDCKIGTIYEGTTNVQLSTMAKIIDK 380 >gi|126725190|ref|ZP_01741033.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] gi|126706354|gb|EBA05444.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] Length = 592 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 86/366 (23%), Positives = 151/366 (41%), Gaps = 56/366 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG--- 251 + LTE GTD+ + ++ DG + +SG K F+S+ D ++LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAVPQDDGSFKISGQKIFISAGEHDLADNIIHLLLAKIPGGPD 220 Query: 252 ---RVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ D G+ NG +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFNVDEDGNLGARNGAFAGKIEEKMGIHGNSTCVMNYDEATGYLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILID 351 + M L A+ + V+ A+ YA + R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVALQGFAQAEVAYQNAVVYANDRLQGRDVTGTKNPEGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAP 409 P ++R + D + A A ++ AN D + ++ A+ ++ P+ K + Sbjct: 341 HPDIRRNLMDQKSFVEGARAFAYWAANLIDRSNRMDDKEAHGLVSLVTPVLKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 ENTIAAQQIYGGHGYIEESGMSQFARDARIAMIYEGANGVQALDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS---SAAALYRAGMNDIA 526 L QD G +++D I ++D+ L E + AS A++Y Sbjct: 448 RKLGQDGGKHVMAFFALVKDFIKENEKDEILQNGFLEPLKNASKDLQTASMY-------- 499 Query: 527 DVFLEN 532 FLEN Sbjct: 500 --FLEN 503 >gi|329851503|ref|ZP_08266260.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] gi|328840349|gb|EGF89921.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] Length = 584 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 45/335 (13%) Query: 154 PSVTSASMVALMT-TPRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 P+++ ++ A+ + KD + P++ S E+ T + LTE + G+D+ Sbjct: 126 PTLSQGAIEAVHAHGTQAQKDLYLPRLISGEWAGT-------------MNLTEPQAGSDL 172 Query: 212 AAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQV----EGRVGC--FLVPR 260 AA+ ++ + DG Y + G K F++ + ++LA++ +G G FL P+ Sbjct: 173 AALAARAEPNGDGTYAIHGQKIFITWGEHGGAENIVHLVLARLPDAPKGTRGISLFLCPK 232 Query: 261 LL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L DG P N + L++K+G ++ T + F G L+G + + M Sbjct: 233 FLVGSDGQPGERNRVKCVGLEHKLGIHASPTCVMAFEGAQGELIGPPHGGLAAMFTMMNA 292 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS--------GGILIDQPVMKRAIADIALDIA 367 L V + +A+ YA+ R G + D P ++ +A + Sbjct: 293 ARLAVGFQGVGVAEAAWQQAVTYAKDRKQGRSLITGQDGAAIYDHPDVRLMLAKMKAKTE 352 Query: 368 AATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGG 421 AA A+ F A + D+ K +E R + PI K W + V + ++ GG Sbjct: 353 AARAICFLTAAAIDQGKVAEDEDERLRAKRREDFLVPIAKAWSTDVGVEVASLGVQVHGG 412 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 G+IEE A++YR++ I G+ D++ Sbjct: 413 MGFIEETGAAQYYRDARIAPIYEGTNGIQAADLVG 447 >gi|288961576|ref|YP_003451886.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510] gi|288913856|dbj|BAI75342.1| acyl-CoA dehydrogenase domain protein [Azospirillum sp. B510] Length = 596 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 48/323 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ DG + ++G K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGIIRTRAVPAGDGSFKITGTKIFISAGEHDLTENILHLVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + DG+P NG+ +++K+G ++++T + F + G+L+G+ Sbjct: 224 RGISLFLVPKFMPNADGTPGDRNGVACGSIEHKMGIKASSTCVMNFEDATGWLVGE---- 279 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQP-- 353 P + M+ + + +++A ++V + LAE A+ YAR R +SG D+P Sbjct: 280 --PHKGMRAMFVMMNAARLAVGIQGLGLAEVSYQNAVTYARERLQGRSLSGVKAPDKPAD 337 Query: 354 ------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 + RA + A + A TA +A + ++R + + ++M PI K Sbjct: 338 PIIVHPDVRRNLLTARAFTEGARALGALTAYKLDVAEKHPDPRTRRDADEFVQLMTPIVK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459 + A++ GG G+I E + ++ R++ I G+ LD++ L + Sbjct: 398 ALFTDIGFDSANIAVQVHGGHGFIWETGVEQYVRDARICQIYEGTNGIQALDLVGRKLPQ 457 Query: 460 KGTNLFEQLFSTLEQDLGSSGKK 482 L F + +D+ ++ +K Sbjct: 458 DVGRLLRHFFHPVGRDIEAAMEK 480 >gi|332306487|ref|YP_004434338.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173816|gb|AEE23070.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 601 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 49/337 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V +A+++ + + P++ + E+ T + LTE G+ +A I Sbjct: 130 TVAAANVIKNFACQSIKDKFMPRMLTGEFTGT-------------MALTEPHAGSSLADI 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261 T+ + DG Y + G K F S+ +SD + +LA+++G + F+VP RL Sbjct: 177 TTNAKPAGDGSYRIKGSKMFTSAGDHELSDNIVHLVLAKIQGAPPGVKGISLFVVPKYRL 236 Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311 E+ P N + L +K+G R + L F + G+L+G+ L + + Sbjct: 237 DENDQPSQRNDVSLAGLIHKMGYRGTTSTVLSFGEKDDCHGYLVGEEHQGLKYMFLMMNE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364 ++ + +A++ +G R SL A + R D+P +KR + Sbjct: 297 ARLGVGFGAAMLGYAGYRHSLQYAKERTQGRVAPNNKPTDKPATIIQHGDVKRMLLAQKS 356 Query: 365 DIAAATALSF---RLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMEC 418 + +L F RL + A + E+ A ++ P+ K W + P A++ Sbjct: 357 YVEGGMSLCFYAARLVDDLHTAATPEEKQKTAELLDLLTPVVKAWPSEFGPKANDLAIQI 416 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +GGSGY E + + +R++ N I G+ LD++ Sbjct: 417 LGGSGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLM 453 >gi|312195699|ref|YP_004015760.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311227035|gb|ADP79890.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 395 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 39/284 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W PK+ S E+ + LTE G+D + +T+ + D + Sbjct: 111 TEEQKKTWLPKVASGEWTAS-------------FALTESGAGSDPSGLTTTAVRDGD-EW 156 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K F++ +P++D F++ A+ + + F+V E G+P GL +K+ Sbjct: 157 VINGSKRFITNAPLADVFMVFARTDPEAASSRGISTFMV----EKGTP-GLSVGPRDHKM 211 Query: 280 GNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333 G T ++ F N + + G+ V G M+ L + + A + V + + Sbjct: 212 GQAGAWTADVYFDNVRVPSSVLIGGEAGVGRGYATAMRCLAHGRIHIAALCVGMSQRLVD 271 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E++ YA R GG++ +++ IAD A D+ AA AL +A FD+ + Sbjct: 272 ESVAYAATREQGGGVIGSHQLIQGLIADSATDLYAARALVSDVAAKFDDGSDK------- 324 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 RI KY+ + + A++ GGSGYI + R YR++ Sbjct: 325 RIGPSCAKYFASEAVGRIADRAVQIHGGSGYIRGVPVERFYRDA 368 >gi|110632385|ref|YP_672593.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110283369|gb|ABG61428.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 598 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 72/412 (17%) Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIA 212 ++SA+M ALM P + + I + D K P V G + LTE GTD+ Sbjct: 117 LSSANM-ALMMYPGLTQGAIAAILAHGTDEQKKTYLPRMVKGVWTGTMNLTEPHCGTDLG 175 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRL 261 + ++ G Y +SG K F+S+ D ++LA++EG + F+VP+L Sbjct: 176 LLRTKAVPNGGGSYRISGQKIFISAGEHDMAENIIHLVLARIEGAPEGTKGISLFIVPKL 235 Query: 262 -LEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+D PNG+ ++ K+G NAT + + GFLLG N G ++ M Sbjct: 236 KLDDAGNPAGPNGVSCGSIEEKMGIHGNATCVMNYDEAEGFLLGAEN---GGLKAM--FT 290 Query: 317 YLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQ--------PVMKRAI 359 ++ A + V+ +++AEA + + R +SG D+ P ++R + Sbjct: 291 MMNEARLGVALQGLAVAEAAYQNAANYARERLQGRSLSGAKAPDKKADPIIVHPDVRRNL 350 Query: 360 ADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 I A + A TAL +A+S ++ ++R Y +M P+ K Sbjct: 351 MTIRAFNEAGRALLLWTALQSDIAHSSEDEQARQLAEDYLALMTPVLKGVLTDKGFEHAV 410 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 A + GG GYIEE+ +++ R++ I G+ LD++ L Sbjct: 411 MAQQVFGGHGYIEEQGMSQFVRDARIAMIYEGANGIQALDLVG-------------RKLP 457 Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 QD G + + I+ D C+E + EK+A + A + G+ND+ Sbjct: 458 QDGGRAVQAFFKIVGD---FCEEHRS-----DEKMAPYTKA---LKKGLNDL 498 >gi|262280256|ref|ZP_06058040.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter calcoaceticus RUH2202] gi|262258034|gb|EEY76768.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter calcoaceticus RUH2202] Length = 607 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADSGIGERNAVTCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRLLLT 352 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AAY PI K + ++ Sbjct: 353 QKAIAEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 413 NNGMQVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIG 456 >gi|284046093|ref|YP_003396433.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283950314|gb|ADB53058.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 376 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 34/268 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGCFL 257 LTE G+D A+ ++ +D ++G K F+++ + I+ A+ E G + F+ Sbjct: 126 LTEPEAGSDAGALRTR----ADAEGRITGAKQFITTGAQAHLLIVFARDESAGGEISAFV 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 V R +GL R + K+G S++T L F T G LG M+I L Sbjct: 182 VKR-----PASGLAVAREEEKMGLHSSSTAALTFEQTPGERLGPAGAG------MRIALG 230 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ V +A+A YAR RH GG + ++ +A++ +I AA A Sbjct: 231 TLDGGRIGIAAQAVGIAQAALDVATAYARERHAFGGPIGRFGAIQEKLAEMQTEIEAARA 290 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A + E A A++ A + ++W EA++ +GG GY E Sbjct: 291 LTWRAARLKQAGLPHTVEGAQAKLFASRVARHWT--------GEAIQILGGYGYTREFPA 342 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458 R+YR++ I G+ L + L Sbjct: 343 ERYYRDAKVTEIYEGTSEIQRLVIARAL 370 >gi|319795998|ref|YP_004157638.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315598461|gb|ADU39527.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 376 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE + G+D +++ + +K +DG Y + G K F++S + ++ V Sbjct: 111 PLAQGQMLGAFCLTEPQAGSDASSLRTTARKDADG-YVIDGVKQFITSGKNGQVAIVIAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 G+ G F+VP G RL++K+G S+ T ++ F N G Sbjct: 170 TDKGAGKRGMSAFIVPT-----DAPGYAVARLEDKLGQHSSDTAQINFDGCRIPAENLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ G +E +I I S M+ S V+LA YA+ R GG + DQ + Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDVALA----YAKERQAFGGSIFDQQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ A I AA L + A+ D +EAA A++ A +MA V + A+ Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYVNDFPLERIYRDVRVCQIYEGTSD 365 >gi|326381772|ref|ZP_08203465.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199198|gb|EGD56379.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 590 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 49/338 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V +A+++A TP W + Y T + L+E + G+ +A I Sbjct: 130 TVGNANLLAKYGTPDQIDTWVRPMLEGRYFGT-------------MCLSEPQAGSSLADI 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263 T++ DG Y ++G K ++S + ++LA+ G + F+VP+ L Sbjct: 177 TTKAAPAPDGTYRITGTKMWISGGDHELTENIVHLVLAKAPGGGPGVKGISLFIVPKFLP 236 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDM--- 312 DG+ N + L +K+GNR L F + G+L+G+L+ + +M Sbjct: 237 DGTRNDVALVGLNHKMGNRGTTNTLLNFGDGSFGDGTGAVGYLVGELHRGLFYMFNMMNE 296 Query: 313 -KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILIDQPVMKRAIADIAL 364 +I + + + +G + SL A + R V +ID P + R + Sbjct: 297 ARIGVGFLATALGYAGFQKSLEYAKVRTQGRPVDAKGPDVPPVPIIDHPDVMRMMLAQKS 356 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMEC 418 A AL A DE ++ ++ A AR ++ PI K W + + A++ Sbjct: 357 YAEGALALGLYCARLLDEEQTAPDDEARARAHLLLEVLTPIAKSWPSQWCLEANSLAIQV 416 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY E + + YR++ N I G+ LD+L Sbjct: 417 HGGYGYTTEFDVEQFYRDNRLNPIHEGAHGIHGLDLLG 454 >gi|218961565|ref|YP_001741340.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans] gi|167730222|emb|CAO81134.1| Acyl-CoA dehydrogenase [Candidatus Cloacamonas acidaminovorans] Length = 381 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 23/257 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGC 255 LTE G+D AI + QK D Y L+G K ++++ F M + +G GC Sbjct: 122 FALTEANAGSDAGAIETTAQKEGD-YYLLNGTKQWITNGGEAGIYCVFAMTDKTKGARGC 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L+E G+P G + + +NK+G R++AT EL F + L+G TG + M Sbjct: 181 SCF--LVEKGTP-GFNFGKKENKMGIRASATRELIFEDCKVPAENLIG--REGTGFITAM 235 Query: 313 KILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 K+ + SV R + AI Y+R R G + ++ +AD+A I AA Sbjct: 236 KVFDKSRPMVGAQSVGVARGAFEVAIKYSRERQQFGKPISSFQGIQFMLADMATQIEAAR 295 Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL + A D AK+ S+E+A + KY+ +A V +A++ +GG GY++E Sbjct: 296 ALVMQTARMIDSGAKNYSKESA-------MCKYFASDVAMKVTTDAVQILGGYGYMKEYP 348 Query: 430 IARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 349 VEKMMRDAKILQIYEGT 365 >gi|88798867|ref|ZP_01114449.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297] gi|88778347|gb|EAR09540.1| acyl-CoA dehydrogenase, putative [Reinekea sp. MED297] Length = 593 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 49/348 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M + L T + + K+ S E+ T + LTE G+ Sbjct: 125 MYPGLSHGAMNTIELHGTDEQKETYLTKLVSGEWTGT-------------MCLTEPHCGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + S+ + DG Y ++G K F+SS D I+LA++ G + F+V Sbjct: 172 DLGILKSKAEPNGDGSYAITGTKIFISSGEHDMAENIVHIVLARLPGAPEGTKGISLFIV 231 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 P+ L DG+ N + +++K+G NAT + F GFL+G + + L Sbjct: 232 PKFLPDGTRNDVKCGSIEHKMGIHGNATCVMNFDAAKGFLIGPEHQGLKCMFTFMNFARL 291 Query: 319 DSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKR------AIA 360 +A+ V+ +S A+ YA+ R + +I P ++R A A Sbjct: 292 GTAMQGVASAELSFQGALEYAKDRLAMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAFA 351 Query: 361 DIA-LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + + + AA+ L + S DEAK++ E + PI K + ++ ++ Sbjct: 352 EGGRVMMHAASQLVDVVKYSKDEAKAK-EADELLSFLTPIAKAFLTEVGTEAANHGVQVY 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 GG G+I E + + R++ + G+ LD+L L+ +G +L Sbjct: 411 GGHGFIAEWGMEQIVRDNRIAQLYEGTTGIQALDLLGRKVLMSQGESL 458 >gi|312602128|ref|YP_004021973.1| acyl-CoA dehydrogenase [Burkholderia rhizoxinica HKI 454] gi|312169442|emb|CBW76454.1| Acyl-CoA dehydrogenase (EC 1.3.99.3) [Burkholderia rhizoxinica HKI 454] Length = 596 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 61/328 (18%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ L+T + + PK+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIETLLTAGSDGQKACYLPKLIAGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257 D++ + ++ ++ +DG Y L G K F++ M+D + L V+G + F+ Sbjct: 171 DLSLVRTRAERQADGTYKLFGTKTFITYGEHDMADNIVHLVLARTSDAPPGVKG-ISLFI 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 VP+ L DG P N + +++K+G +++ T L+F + G L+G+ N + Sbjct: 230 VPKFLLGGDGLPGTRNDVDCVSIEHKLGIKASPTAVLQFGDHGGAIGELVGEENRG---L 286 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSG----GILIDQ-PVM 355 E M I ++SA SV V++AE A + R V G + IDQ P + Sbjct: 287 EYM--FIMMNSARFSVGVQGVAIAERAYQQAAAYAAERVQSRPVDGSAKQAVTIDQHPDV 344 Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409 KR + + I A +L++ A++ D +A R + A + PI K W +++ Sbjct: 345 KRMLMTMRALIEGARSLNYFAASACDIAHRHPDASVRQQYARRYEFLVPIVKGWSIELSV 404 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G++EE A+HYR++ Sbjct: 405 EVASMGVQVHGGMGFVEETGAAQHYRDA 432 >gi|254563431|ref|YP_003070526.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4] gi|254270709|emb|CAX26714.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4] Length = 587 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++A+ ++ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSALRTRAEPNGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DGS N L L++K+G ++ T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGLEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AA+ + + A D A +AA+ R ++ P+ K + +A V + Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470 ++ GG G++EE A+ R++ I G+ +D++ L G + Q+ S Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457 >gi|91781807|ref|YP_557013.1| putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia xenovorans LB400] gi|91685761|gb|ABE28961.1| Putative acyl-CoA dehydrogenase oxidoreductase [Burkholderia xenovorans LB400] Length = 595 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ + + T + LTE GTD+ + ++ + SDG Y Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNSDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 AISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+L+G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|288919956|ref|ZP_06414277.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288348609|gb|EFC82865.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length = 609 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 89/373 (23%), Positives = 170/373 (45%), Gaps = 58/373 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ DG + + G K F++S P + ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAIAQPDGTWHIEGVKRFITSGDWDVPENIFHLVLARPEGHGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + FLVP+ + D G+ NG L+ K+G + +AT EL F G+L+GD Sbjct: 224 KGLSMFLVPKYMPDPETGELGARNGAYVTNLEKKMGLKVSATCELRFGEREPAVGWLVGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 V G + +++ Y + +++ + A+ +AR R V G Sbjct: 284 --VHEGIAQMFRVIEYARMMVGTKAIATLSTGYLNALDFARER-VQGADLPRSTDKSAPR 340 Query: 348 -ILIDQP------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAP 398 +I+ P ++++A A+ + TA +F+ A + A+ ++EAA ++ P Sbjct: 341 VTIINHPDVRRMLMLQKAYAEGMRSLVLFTA-TFQDAVALAAARGEADEAAERMNDLLLP 399 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456 I K + + ++A +++ GGSGY+++ I ++ R++ +++ G+ + D+ Sbjct: 400 IVKGVGSERSYELLATSLQVFGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRK 459 Query: 457 LLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILRDSISLCKED-----KGLARFLTEKIAL 510 ++ + LF +++ G +G + R+ + ED L FLT A Sbjct: 460 IVRDQGHALTSLFGQIQEFAKGETGNGALRSEREVLGASLEDVQAMVAALVGFLT---AG 516 Query: 511 ASSAAALYRAGMN 523 A A +YR G+N Sbjct: 517 AEDPAQVYRVGLN 529 >gi|311104938|ref|YP_003977791.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310759627|gb|ADP15076.1| acyl-CoA dehydrogenase, middle domain protein 5 [Achromobacter xylosoxidans A8] Length = 608 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 65/332 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+T + K + P++ ++ T + LTE + G+ Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRKQYVPQLIGGKWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ K +DG Y LSG K F++ +++ I L A V+G + F+ Sbjct: 171 DLAQVATRAVKQADGSYRLSGQKIFITYGDHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNV 304 VP+ L DGS N + L++K+G + T L + + G+L+G+ N Sbjct: 230 VPKFLVQADGSLGKRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEVGEGAIGYLVGEQNR 289 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGI----LID 351 +E M I +++A SV + ++E A+ YAR R V G ++ Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERACQHALAYARERVQGRAVEGSAAAVAIVR 344 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405 P ++R + + AA A+S+ A + D+ + RS A+ M PI K + Sbjct: 345 HPDVQRMLMTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRSRNRAFYEYMVPIVKGFST 404 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V + ++ GG GYIEE A++YR++ Sbjct: 405 ETAVEVASLGLQVHGGMGYIEETGAAQYYRDA 436 >gi|301061625|ref|ZP_07202382.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta proteobacterium NaphS2] gi|300444262|gb|EFK08270.1| acyl-CoA dehydrogenase, C-terminal domain protein [delta proteobacterium NaphS2] Length = 594 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 92/409 (22%), Positives = 171/409 (41%), Gaps = 62/409 (15%) Query: 91 GERWDKVEFH-------PAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 GE W V+F P + A + +G +I D + + H +R LM Sbjct: 60 GENWG-VKFEDGRVLCAPEFKAAFKDYGENGWTAAIHDPEYGG--QGFPHMMRIVINDLM 116 Query: 144 AQLEAGHLMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 M+PS+T +A ++ + + + + PK++ ++ T + Sbjct: 117 YGAAQSFNMAPSLTRGAAHLIEAFGSEELKERYVPKMYGGQWAGT-------------MA 163 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+++AA+ S + D + + G K F+S D ++LA++EG Sbjct: 164 LTESNAGSNLAALRSTAYREGDH-FKIKGSKIFISWGEHDLTENIIHLVLARIEGAPEGI 222 Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + F+VP R+ DGSP N + ++ K+G ++ T L F + G+L G Sbjct: 223 KGISLFVVPKIRVNADGSPGEFNDVVCTGVEKKMGLHASPTCALNFGDNDGCIGYLCGRE 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL----------IDQ 352 N+ + M ++S + ++ + A+ Y + R V G L ID Sbjct: 283 NMGLAHMFVMMNEARINSGVSGMTLGSTAYQNALAYTKER-VQGSDLCGRKKGYVPIIDH 341 Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 P ++R A D + A A L+++ ++ ++ M PI K +C Sbjct: 342 PDVRRMLLWMKATVDGMRSMIYAGAYWDDLSHALEDGDEKTHYKNLTEFMTPIIKAYCSD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + V A++C+GG GY E + ++ R+S S+ G+ +D++ Sbjct: 402 LGFKVCETAVQCLGGYGYCREYPLEQYLRDSKIVSLYEGTNGIQSMDLM 450 >gi|226943757|ref|YP_002798830.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226718684|gb|ACO77855.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 614 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 67/367 (18%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ A+ + + + PK+ S E+ T + LTE G+ Sbjct: 148 LCPMLTQGALEAIAHHASAELQAAYLPKLVSGEWTGT-------------MNLTEPDAGS 194 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+AAI ++ D Y +SG K F++ M+D I L A V+G + F+ Sbjct: 195 DLAAIKTRAVPNGDH-YLISGQKIFITWGDHQMTDNVIHLVLARLPDAPAGVKG-ISLFI 252 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPV 309 VP+ L D G+ N L++K+G ++ T + F G+L+G+ P Sbjct: 253 VPKFLLDAQGNPGARNDAQCVSLEHKLGIHASPTCVMSFGEKEGAVGYLVGE------PH 306 Query: 310 EDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR------RRHVSGGILIDQPVMKR 357 + + + ++ A SV +S++E A YAR R+ S +I+ P ++R Sbjct: 307 KGLACMFTMMNHARQSVGLQGLSISERAYQQARQYARERLQGTRKDGSRFPIIEFPDVRR 366 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411 + + I A AL+ A D + AA AR ++ PI K W ++A V Sbjct: 367 MLLQMKASIEAMRALALVAAAEVDRVTHAPDPAAAARHQGRVDLLTPIVKGWLTELAQEV 426 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG---TNLF 465 + ++ GG G+IEE ARHYR++ +I G+ LD++ LL +G LF Sbjct: 427 TSLGVQIHGGMGFIEETGAARHYRDARILTIYEGTTGIQALDLVGRKTLLNRGELLAGLF 486 Query: 466 EQLFSTL 472 +++ T+ Sbjct: 487 DEIGETV 493 >gi|114563237|ref|YP_750750.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334530|gb|ABI71912.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina NCIMB 400] Length = 601 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/332 (23%), Positives = 150/332 (45%), Gaps = 52/332 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM++ + +TE G+ + + ++ K DG Y ++G+K ++S +SD + Sbjct: 152 PMREGRFMGTMAMTEPGSGSALGDLITKAVKSDDGTYRITGNKIYISGGDHDLSDNIVHL 211 Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF-- 291 +LA+++G + F+VP+ L EDGS N + L +K+G R+ + L F Sbjct: 212 VLARIQGAPKGVKGISLFVVPKFLLNEDGSVGEDNEVALAGLFHKMGGRAQTSTALSFGE 271 Query: 292 -SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + + G+L+G+ L + + +I++ A+++V+G + S + YA+ R G Sbjct: 272 KNGSIGYLVGEEHCGLKYMFHMMNEARIMVGTSGAVLAVAGYQYS----VDYAKNR-PQG 326 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS--RSEEAAY 392 + +I+ +KR + A AL D+ ++ SE+ + Sbjct: 327 RLPSCKDPQSPMVNIIEHADVKRMLLAQKAYAEGAMALVLYGTQLSDDERTADTSEQREH 386 Query: 393 AR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A + PI K W + P + A++ +GG GYI E + YR++ N I G+ Sbjct: 387 AHTLLDFLTPIIKTWPSEYGPKANSYAIQVMGGHGYINEHPVEMFYRDNRLNPIHEGTTG 446 Query: 449 AMVLDV------LNLLEKGTNLFEQLFSTLEQ 474 LD+ +N ++ ++ T+EQ Sbjct: 447 IQSLDLITRKVPMNKMQGYKATLHEITKTIEQ 478 >gi|312963447|ref|ZP_07777929.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6] gi|311282253|gb|EFQ60852.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6] Length = 592 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 51/375 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +TS + V++ T + + + PK++S E+ A + LTE GT Sbjct: 127 LYPMLTSGACVSIATHASEELKAAYLPKMYSGEW-------------AGSMCLTEAHAGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ + +DG Y +SG K F++ D ++LA++ + FLV Sbjct: 174 DLGMIRTKAEPQADGSYTVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLV 233 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + + G+ N + +++K+G +++AT + F G+L+G+ N + M Sbjct: 234 PKFMVNADGSLGARNPVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMM 293 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQPVMKRAIAD 361 L I ++ S AI YAR R S +I P ++R + Sbjct: 294 NYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQAKDKAADPIIVHPDVRRMLLT 353 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415 + A S +A D AK + AA R ++ P+ K + + Sbjct: 354 MKASNEGGRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLTDLGLETTVLG 413 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 + GG GYI E + R+ I G+ LD++ ++ G + + Sbjct: 414 QQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYRLFADEIR 473 Query: 474 QDLGSSGKKVITILR 488 Q + +G +++ + Sbjct: 474 QFIAGAGAELVEFTK 488 >gi|114767660|ref|ZP_01446370.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis HTCC2601] gi|114540328|gb|EAU43422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601] Length = 566 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 34/302 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ + DG Y ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGALSSKAEPNGDGTYAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279 S SD ++LA++ + F+VP+ L D G+P N L L++K+ Sbjct: 197 SWGDSDLVENVCHLVLARLPDAAPGTKGISLFMVPKFLPDEAGNPGVANTLKVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T + + G+++G+ + M L V + A+ +A Sbjct: 257 GLHGSPTCVMSYEGATGWIVGEPGGGMKAMFTMMNNARLGVGGQGVGAAEGAYQHALAFA 316 Query: 340 RRRHVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R +I ++R +A + +I AA A++ A S D A E A A Sbjct: 317 NERKQGKNPHDTIIGHADVRRMLATMKAEILAARAIALDCAVSIDMGRATGAPEWTARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI K + + V ++ GG GY+EE A+ YR+ +I G+ +D+ Sbjct: 377 FLTPIAKAFGTDIGCEVSEMGVQVHGGMGYVEESGAAQFYRDVRVTAIYEGTNGIQAMDM 436 Query: 455 LN 456 + Sbjct: 437 VG 438 >gi|23012171|ref|ZP_00052323.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 463 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 24/281 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++ + S+ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSGLRSRAEPHGDGSYRITGAKIYITYGEHDLADNIVHLVLARLKDAPS 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DG+ N L L++K+G + T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGTRNDLRCSGLEHKLGIHGSPTCSMAFGDGGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADVQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AAA + + A D A +AA+ R ++ P+ K + +A V + Sbjct: 340 MLLTMKAYTAAARGICYLTAQGLDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G++EE A+ R++ I G+ +D++ Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVT 440 >gi|13541951|ref|NP_111639.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] gi|14325382|dbj|BAB60286.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] Length = 384 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 40/285 (14%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GR---- 252 GL +TE G+D A I++ +K D Y ++G K F+S+ +SD F+ A + G+ Sbjct: 122 GLAITEPGAGSDAAGISTTAEKRGDK-YIINGDKIFISNGRISDFFVFDAVTDPGKRHKG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305 + F+V D + GL R +K+G R ++TVEL F N G L G V Sbjct: 181 ITAFVV-----DANTPGLKISRDIHKMGIRGSSTVELVFEDMEVPAENIVGELNGGFKV- 234 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 I+ LD+ + ++ + +AE A+ Y ++R G + ++ IA Sbjct: 235 --------IMETLDAGRIGIAAQALGIAEEAFAEAMDYIKQRKQFGTTISSFEGIQFMIA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A +I AA L++ A + + E +A A++ A +A V +A++ G Sbjct: 287 DMATEIEAARYLTYVAAEKWQHKEDTIEISAMAKLKA-------SDVAVRVTTDALQLFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 G GY + RH R+S I G+ L + L K TN + Sbjct: 340 GYGYTVDLDAERHMRDSKITQIYEGTNQIQRLVIAKELLKKTNYY 384 >gi|217973249|ref|YP_002358000.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS223] gi|217498384|gb|ACK46577.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223] Length = 585 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 41/326 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK++S E+ A + +TE + G+D+ I ++ DG Y Sbjct: 144 SEELKQAYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQR 274 ++G K F++ D ++LA++ G FLVP++ DGS NG+ Sbjct: 191 AITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGS 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT + F N GFL+G+ N + M L I + + + Sbjct: 251 IEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSSQAAYQM 310 Query: 335 AIHYARRRH---VSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 A YA+ R+ +GG +I ++R + I A ALS D A Sbjct: 311 AADYAKERNQGVAAGGSPTGSESDAIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLA 370 Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 K +E A Y ++ P+ K + A + GG GYI E I + R++ Sbjct: 371 KYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464 I G+ +D L G NL Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|134095998|ref|YP_001101073.1| acyl-CoA dehydrogenase [Herminiimonas arsenicoxydans] gi|133739901|emb|CAL62952.1| putative butyryl-CoA dehydrogenase [Herminiimonas arsenicoxydans] Length = 596 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 52/329 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ + S+ + +DG Y ++G K Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAHCGTDLGLLRSKAEPQADGSYKITGSKI 198 Query: 234 FLSSPMSDAF-----IMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277 F+S+ D ++LA++ +G G F+VP+ L + G+ N + L+ Sbjct: 199 FISAGEHDMVQNILHLVLARLPDAPQGTHGISLFIVPKFLPNADGTLGARNPIFCGALEE 258 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT ++ G+++G N + M L + S+ V+ A+ Sbjct: 259 KMGIHGNATCQMNIDGATGWMIGQPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNALL 318 Query: 338 YARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALSF-RLAN 378 YA+ R ++G D+P + +A A+ ++ AL R N Sbjct: 319 YAKDRLQMRSLTGVKAADKPADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVALQIDRELN 378 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 DEA R + A ++ PI K + +EAM+ GG GYI E + ++ R++ Sbjct: 379 HPDEA-VRKDAADEVALLTPIIKAFLTDNGWIATSEAMQVYGGHGYIAEWGMEQYVRDAR 437 Query: 439 ANSILLGSGNAMVLDVLN---LLEKGTNL 464 N I G+ LD+L LL+ G L Sbjct: 438 INMIYEGTNTIQSLDLLGRKILLDNGAKL 466 >gi|332994472|gb|AEF04527.1| putative acyl-CoA dehydrogenase [Alteromonas sp. SN2] Length = 586 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 87/354 (24%), Positives = 152/354 (42%), Gaps = 51/354 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD++ ++++ + DG Y ++G+K F+++ D ++LA+ Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYKVTGNKIFITAGDQDWSSNVIHLVLARLPDAPK 221 Query: 249 -VEGRVGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+L+ E G PN L +++K+G +++ T + F + G+L+G+ Sbjct: 222 GVKG-ISLFLVPKLMLDENNEPGEPNSLSVGSIEHKMGIKASPTCVMNFDDATGWLVGEE 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350 N + M + + S A+ YAR R S GI ++ Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPDGKADPIV 340 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA----RIMAPITKYWCC 405 QP + R + I + ALS A D E EE A + + PI K + Sbjct: 341 FQPDVARMLLTQKSQIEGSRALSLLYAKYMDIEKLGTDEEKENADKVLQFLTPICKAYMT 400 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 M + ++ GG G+I E + + R+ + G+ LD++ L G Sbjct: 401 DMGLETTSIGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL 517 + E + Q ++ + D+ E+KGLA+ L + ASSA L Sbjct: 461 MMEATYQAFAQ--------LVADISDA-----ENKGLAQGLLDDWR-ASSADCL 500 >gi|295696336|ref|YP_003589574.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411938|gb|ADG06430.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 382 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 22/260 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LG+TE G+D+A I ++ ++ DG + + G K F+++ P +D ++A+ G + Sbjct: 126 LGITEPDHGSDVAGIETRARREGDG-WVIRGRKLFITNGPRADFITLVARTSDEPGYRGI 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G+ R +K+G RS+ T EL F + + LLG+ +I+ Sbjct: 185 SLFLVEMDRPGVSVGRKLDKVGMRSSDTAELVFDDVWVPAESLLGEEGKGF-----YQIM 239 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L M + V+ A+ H YA+ R G + V+ +A++A++I A Sbjct: 240 WELQGERMIAAAGAVATAQYAHELALAYAKERRQFGRPIAGFQVVSHLLAEMAVEIEACR 299 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++ +A F + S+E + A++ A T +W V+ A++ GG+GY+ E I Sbjct: 300 QLTYSVAWRFARGEVPSKEISMAKLAASQTAFW-------VVDRALQIFGGNGYMAEYPI 352 Query: 431 ARHYRESPANSILLGSGNAM 450 R +R+ N I G+ M Sbjct: 353 ERLWRDVRLNRIGAGTDEIM 372 >gi|194288931|ref|YP_002004838.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG 19424] gi|193222766|emb|CAQ68769.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus taiwanensis LMG 19424] Length = 594 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKATFLPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAQNIVHLVLARTPDAPEGVKGISLFIV 230 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNDDGSTGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I ++SA SV ++++E A+ YAR R S + +I P +K Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAYARERVQSRPVDGSAREAVTIIHHPDVK 345 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A+ + A +A A + A+ + R + A+ M P+ K W +++ Sbjct: 346 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRRQSQAFYEFMVPVVKGWSTELSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+HYR++ Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|323524745|ref|YP_004226898.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323381747|gb|ADX53838.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 595 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ S + T + LTE GTD+ + ++ + DG Y Sbjct: 144 TPELQQRYLPKLVSGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFIPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+++G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNAIQALDLL 453 >gi|84684409|ref|ZP_01012310.1| acyl-CoA dehydrogenase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84667388|gb|EAQ13857.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2654] Length = 571 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 49/364 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+T++ DG + ++G K ++ Sbjct: 150 PKLTSGEWTGT-------------MNLTEPQAGSDVGALTTKAVPNGDGTFAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLL--EDGSP---NGLCYQRLKNKI 279 S D ++LA++ +G G F+VP+ + E+G+P N L L++K+ Sbjct: 197 SWGDHDMAENICHLVLARLPDGAPGTKGISLFMVPKYIPDENGNPGKANDLRVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T + + G+++G+ + + M L+ + V + A+ YA Sbjct: 257 GLHGSPTCVMSYEGATGWIVGEEHAGMAAMFTMMNNARLNVGVQGVGVAEGAYQHALAYA 316 Query: 340 RRRHVSG-------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 R G + D ++R + + + AA A+S + + D A + ++ Sbjct: 317 LERKQGKTPIENGTGTIADFADVRRMLVQMRAETYAARAISLACSTAIDMAGATGDKGWK 376 Query: 393 AR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 AR + PI K + V ++ GG GY+EE A++YR+ SI G+ Sbjct: 377 ARAAFLTPIAKSYGTDTGIKVAELGVQVHGGMGYVEETGAAQYYRDVRVTSIYEGTNGIQ 436 Query: 451 VLDVL--NLLEKGT---NLFEQLFSTLE---QDLGSSGKKV---ITILRDSISLCKEDKG 499 +D++ +++ G L +++ T E + LG K V LR++ E Sbjct: 437 AMDLVARKMMDGGDMAFRLLDEIEGTAEGARETLGELAKPVWEAAETLREATEWLVEQDL 496 Query: 500 LARF 503 RF Sbjct: 497 QTRF 500 >gi|253559433|gb|ACT32397.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens] Length = 598 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 121/291 (41%), Gaps = 38/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ I ++ +DG Y +SG K F+S+ MSD I L A Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L D G+ NG+ +++K+G +++AT L F GFL+G+ N Sbjct: 224 KG-ISLFIVPKFLPDATGEAGARNGVSCGSIEHKMGIKASATCVLNFDGAKGFLIGEPNK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILID 351 + M L + + + S AI YA R V+ I++ Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRALTGPKAPEKVADPIIV- 341 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405 P ++R + + AL++ A D A +R E + PI K + Sbjct: 342 HPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSPDETARQEAEDLLAFLTPICKAFMT 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 V M+ GG G+I E + + R+ I G+ LD+L Sbjct: 402 DTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG 452 >gi|330812185|ref|YP_004356647.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380293|gb|AEA71643.1| putative dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 598 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 132/334 (39%), Gaps = 54/334 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ I ++ +DG Y +SG K F+S+ MSD I L A Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAISGSKIFISAGEHDMSDNIIHLVLAKLPDAPAGT 223 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L D G NG+ +++K+G +++AT L F GFL+G+ N Sbjct: 224 KG-ISLFIVPKFLPDATGEAGPRNGVSCGSIEHKMGIKASATCVLNFDGAKGFLIGEPNK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILID 351 + M L + + + S AI YA R V+ I++ Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGEASFQGAIKYANDRLQMRSLTGPKVPEKVADPIIV- 341 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405 P ++R + + AL++ A D A ++E A + PI K + Sbjct: 342 HPDVRRMLLTMKAFNEGNRALTYFTAQLLDTAHLSADETARQEAEDLLAFLTPICKAFMT 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 V M+ GG G+I E + + R+ I G+ LD+L Sbjct: 402 DTGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG--------- 452 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 + LGS GK + R C + G Sbjct: 453 -------RKVLGSQGKLLRGFTRIVHKFCAANAG 479 >gi|300309596|ref|YP_003773688.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300072381|gb|ADJ61780.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 596 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 62/334 (18%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ + S+ + +DG Y ++G+K Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEAHCGTDLGLLRSKAEPQADGSYKITGNKI 198 Query: 234 FLSSPMSDA-----FIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277 F+S+ +D ++LA++ EG G FLVP+ L + G+ N + ++ Sbjct: 199 FISAGENDVSANIIHLVLARLPDAPEGSKGISLFLVPKFLPNADGSLGARNPIFCGAIEE 258 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-- 334 K+G NAT ++ G+L+G P + ++ + +++++A + V + L E Sbjct: 259 KMGIHGNATCQMNLDGATGWLIGQ------PHKGLQAMFVFMNAARLGVGMQGLGLTEVA 312 Query: 335 ---AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIAAATALS 373 A+ YA+ R +SG D+P + +A A+ + AL Sbjct: 313 YQNALVYAKDRLQMRSLSGIKAADKPADPIIVHPDVRRMLLTAKAFAEGGRAFTSYVALE 372 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + + + R + A ++ P+ K + A +E ++ GG GYI E + ++ Sbjct: 373 LDKELTHPDEQVRKDSADIVALLTPVVKAFLTDNAWMATSECLQVYGGHGYIAEWGMEQY 432 Query: 434 YRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 R++ N I G+ LD+L L++ G L Sbjct: 433 VRDARINMIYEGTNTIQSLDLLGRKILMDNGAKL 466 >gi|209515063|ref|ZP_03263932.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209504689|gb|EEA04676.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 594 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 95/400 (23%), Positives = 163/400 (40%), Gaps = 71/400 (17%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 LMSP +T + L T + RV + PK+ S E+ T + LTE + G Sbjct: 126 LMSPGLTHGATACLQTYGSERVKTELLPKVASGEWLST-------------MCLTEPQAG 172 Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GRVGC-- 255 +D+ I S+ + +DG Y + G K F++ D ++LA++ G G Sbjct: 173 SDVGLIRSRATEAPGTDG-YFVDGSKIFITGGAHDLTENIVHLVLARLPDAPPGTKGLSL 231 Query: 256 FLVPRLLE-DG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 F+VP LE DG S NG+ + ++ K+G + + T + F FG+L+G+ + + Sbjct: 232 FVVPEWLEGDGAGRSRNGVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLNCLFV 291 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILID---------QPVMK 356 M L A+ + + A YA+ R V G + P M+ Sbjct: 292 MMNAARLQVAMQGLGHAHTAWQRAHAYAQERAQMRAVSVPSGAAVASGHAAPISFHPAMR 351 Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R + ++ + A+ + A+ D +A R + A A ++ PI K + Sbjct: 352 RILLELRAIVEGERAIGYWTAHWLDVAARHADAAERVQAAQLASLLTPIAKTFFTANGFD 411 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468 + A++ GG GYI E I + R+S + + G+ +D+L +L G+ + L Sbjct: 412 AASNALQVFGGYGYIHEYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGSAALDVL 471 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508 +R LC+E L R K+ Sbjct: 472 LRH---------------VRTEAQLCRESDPLVRSAGAKL 496 >gi|224370196|ref|YP_002604360.1| Acd10 [Desulfobacterium autotrophicum HRM2] gi|223692913|gb|ACN16196.1| Acd10 [Desulfobacterium autotrophicum HRM2] Length = 615 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 88/359 (24%), Positives = 153/359 (42%), Gaps = 58/359 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A++V T + + K+FS E+ T + LTE G+D+ A++S Sbjct: 130 AATLVEAFGTDEQKRLYMKKMFSGEWGGT-------------MLLTEAEAGSDVGALSSV 176 Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--RLLED 264 +K +DG Y ++G K F+S+ D +LA++EG + FLVP R+ +D Sbjct: 177 AKKNADGTYSITGTKIFISAGEHDLAKNIIHPVLARIEGAPEGTRGISLFLVPKYRVNDD 236 Query: 265 GSP---NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 GS N + ++ K+G NAT L E + G LLG N + M ++ Sbjct: 237 GSLGEFNNVVCTGIEEKMGLHGNATCTLSLGEKGESIGTLLGAENKG---MSAMFRMMNE 293 Query: 319 DSAIMSVSGMRVSLAE---AIHYARRRHVSGGIL------------IDQPVMKRAIADIA 363 A + + G VS A A+ YAR R IL I+ P ++R + ++ Sbjct: 294 ARAFVGLQGFAVSTASYMYALDYARTRIQGKNILKARQPGVKSCPIIEHPDVRRQLLNMK 353 Query: 364 LDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 I +L + +A + ++ + + ++ P+ K + + V + ++ Sbjct: 354 ALIEGMRSLIYFNGKCLDIAETSEDPEQKERYGDMVELLTPLVKGYVTDRSLEVCSHGVQ 413 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474 GG GYI+E + + R+S I G+ +D+L L K LF + Q Sbjct: 414 VYGGYGYIKEFPVEQLMRDSRIYMIYEGTNGIQAMDLLGRKLAMKDGKLFRDFIDEIRQ 472 >gi|153000792|ref|YP_001366473.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS185] gi|151365410|gb|ABS08410.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185] Length = 585 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ DGS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + F N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 R+ +GG +I ++R + I A ALS D AK +E Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|138894835|ref|YP_001125288.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|134266348|gb|ABO66543.1| Probable acyl-coA dehydrogenase [Geobacillus thermodenitrificans NG80-2] Length = 382 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 126/303 (41%), Gaps = 43/303 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK S E + + +TE G+D+A I++ K Sbjct: 99 IASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAGSDLANISTTAVKA 145 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270 D Y ++G K F+++ + I++A C P ++E +P G Sbjct: 146 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPHAKPPHRGISLLVVERDTP-GF 196 Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 R K+G + T EL F + LLG+ + + L AI + + Sbjct: 197 TRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 256 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 V + A HY ++R G + + ++ +A++A DIA R+ K Sbjct: 257 AEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIV 316 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + A K+W +MA V AEAM+ GG GY+EE IAR YR+ P ++I G+ Sbjct: 317 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 369 Query: 448 NAM 450 M Sbjct: 370 EMM 372 >gi|163852660|ref|YP_001640703.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium extorquens PA1] gi|163664265|gb|ABY31632.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens PA1] Length = 596 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/389 (21%), Positives = 157/389 (40%), Gaps = 62/389 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+ +P + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y L+G K F+S+ D +++A++EG + F+V Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + +++K+G +N+T + + G+L+G N + M Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMK---- 356 L + + + A+ YA+ R V+ I++ V + Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKVADPIIVHPDVRRTLMQ 352 Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA + A + TAL+ +A+ +A R +M P+ K A EA Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GY+EE +++ R++ I G+ +D++ L +D Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504 G + +T ++ I ED+G+ F+ Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488 >gi|126174298|ref|YP_001050447.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS155] gi|125997503|gb|ABN61578.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155] Length = 585 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ DGS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + F N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 R+ +GG +I ++R + I A ALS D AK +E Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|304408833|ref|ZP_07390454.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|307302836|ref|ZP_07582591.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] gi|304352654|gb|EFM17051.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|306913196|gb|EFN43618.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] Length = 585 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 41/326 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK++S E+ A + +TE + G+D+ I ++ DG Y Sbjct: 144 SEELKQAYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQR 274 ++G K F++ D ++LA++ G FLVP++ DGS NG+ Sbjct: 191 AITGSKIFITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNTDGSLANANGVSVGS 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT + F N GFL+G+ N + M L I + + + Sbjct: 251 IEHKMGLKGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310 Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 A YA+ R+ +GG +I ++R + I A ALS D A Sbjct: 311 AADYAKERNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLA 370 Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 K +E A Y ++ P+ K + A + GG GYI E I + R++ Sbjct: 371 KYAQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464 I G+ +D L G NL Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|187927451|ref|YP_001897938.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|309779847|ref|ZP_07674602.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] gi|187724341|gb|ACD25506.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|308921424|gb|EFP67066.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] Length = 595 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254 LTE GTD+ + ++ + ++DG Y ++G K F+S+ D ++LA++ G Sbjct: 166 LTEPHCGTDLGILRTRAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGT 225 Query: 255 ----CFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 F+VP+ + D G+P N + +++K+G NAT + G+++G+ N Sbjct: 226 KGISLFVVPKFIPDANGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + S+ V+ + YA+ R +SG D+P Sbjct: 286 LNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +RA A+ + AL S + +R + A ++ PI K + Sbjct: 346 DVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKAFLSDN 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 406 AFISTNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLG----------- 454 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLT 505 + D+G+ KK +++D + ++ + F+ Sbjct: 455 --RKILGDMGAKMKKFGKLVQDFVEAEGTNEAMQEFIN 490 >gi|330824270|ref|YP_004387573.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329309642|gb|AEB84057.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 594 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 38/311 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+AA+ S+ D Y +SG+K F++ M++ + L A Sbjct: 162 MNLTEPQAGSDLAALRSRAMPEGD-HYRVSGNKIFITWGEHDMAENIVHLVLARLPDAPA 220 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299 V+G + FL P+ L + G N L +++K+G ++ T + F G+L+ Sbjct: 221 GVKG-ISLFLCPKFLANDDGTLGERNDLACTSIEHKLGIHASPTASMCFGERGGAIGYLI 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILIDQ 352 G+ + + M L+ + V + A YA R V G G + Sbjct: 280 GEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARAYALER-VQGRPALAGSGTIAGH 338 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 P ++R + D+ A AL++ A D +A+ R+ A ++ P+ K WC Sbjct: 339 PDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHPDAQERTRAQALVGLLTPVVKGWCTD 398 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL 464 A + ++ M+ GG GY+EE A++ R++ +I G+ D++ L +G Sbjct: 399 NALGIASDGMQVHGGMGYVEETGAAQYLRDARITTIYEGTTGIQANDLIGRKLAREGGAT 458 Query: 465 FEQLFSTLEQD 475 + L ++ D Sbjct: 459 LKALLRRIDAD 469 >gi|218777915|ref|YP_002429233.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759299|gb|ACL01765.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 595 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 50/340 (14%) Query: 152 MSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M+PS+T +A ++ T + + PK++ E+ T + LTE G+ Sbjct: 125 MAPSLTHGAAHLIESFGTDEQKQTYIPKMYGGEWAGT-------------MALTEPNAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 ++AA+ + D Y + G+K F+S D + LA++EG + F+V Sbjct: 172 NLAALETMAYPEGDH-YKIKGNKIFISWGDHDLAGNIVHLALARIEGAPEGVRGISLFIV 230 Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P R+ E+G+P N + ++ K+G S+ T L F G+L G N+ + Sbjct: 231 PKYRVDENGNPGEFNDVVCTGIEKKLGLHSSPTAALAFGGKDGCIGYLCGKANMGLAHMF 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAI-- 359 M +++ + +S + A+ Y + R I +ID P ++R + Sbjct: 291 QMMNAARINTGVSGMSMASAAYQHALDYTKSRVQGRDIAKRKQGSVPIIDHPDVRRMLLW 350 Query: 360 ----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 D + TA LA + + + M PI K +C + V A Sbjct: 351 MKGAVDGMRSMIYTTAFWADLAQVTTDPEEKERCTMLMEFMTPIVKSYCSDIGFKVCETA 410 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M+C+GG G+ ++ I ++ R+S S+ G+ D++ Sbjct: 411 MQCLGGYGFCKDYPIEQYLRDSKIMSLYEGTNGIQSTDLM 450 >gi|183222449|ref|YP_001840445.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912487|ref|YP_001964042.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777163|gb|ABZ95464.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780871|gb|ABZ99169.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 570 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 64/366 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A+++ + + + +W PK+ S Y T +GL+E G+D+ IT++ Sbjct: 157 AAILEVCASEEMKNEWIPKLISGNYTVT-------------MGLSEPDFGSDLPNITTKA 203 Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFL-VPRL-LEDGSPNGLCY--- 272 K +G +WFL+ + F +A V G G L + R ++ GL + Sbjct: 204 FK--------NGEEWFLNG--TKRFQTVACGVNGGSGITLTLARTGTQESGARGLSFFIV 253 Query: 273 -------QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 Q ++ K+G +++AT E F N+ G L+G G V+ ++ L+ A +SV Sbjct: 254 ENKDYVVQGIEKKLGIKASATCETVFENSKGHLVGKEGF--GLVK--YVMGMLNGARLSV 309 Query: 326 SG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 S + + E+ YA R G + + P ++R + + ++A L A S Sbjct: 310 SSQGTGIVTAAFEESYKYANERIQFGKPIYEIPAVRRMLDRMERELAGMRCLMVEAAYSV 369 Query: 381 D--------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 D E KS A + PI+KY+ +M ++ + ++ +GG+GY E Sbjct: 370 DKYYWYEDGREVSTEELKSAKFWEKVANTLTPISKYYNSEMCNDLVYDGLQVLGGAGYTE 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE---KGTNLFEQLFSTLEQDLGSSGKKV 483 + ++R YR++ +I G+ V + + GT F L LGS G K Sbjct: 430 DYDLSRLYRDARITNIYDGTTQIQVNAAIGGITSGMSGTGTFRAYLDHL--SLGSDGNKR 487 Query: 484 ITILRD 489 + +R+ Sbjct: 488 LKEIRE 493 >gi|323495209|ref|ZP_08100293.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546] gi|323310568|gb|EGA63748.1| putative acyl-CoA dehydrogenase [Vibrio brasiliensis LMG 20546] Length = 384 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MV T + + PK+ S E+ LG LTE G+D AA+T+ Sbjct: 96 MVGSFGTQAAIESYCPKLISGEW----------------LGSYCLTEPNAGSDAAALTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K+++ Y L+G K F+S +D +++A+ G G + + G+ Y R + Sbjct: 140 A-KLTEQGYVLNGAKVFISGAGDTDVLVVMART-GEAGAKGISAFIVPADSQGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRSISFDNVVVPVENLLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA + A+ D+ S + A Sbjct: 256 LNQATQYLKERKQFGQPLAQFQALQFKLADMATELVAARQMVRLAASKLDQGSS--DATA 313 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 Y + K + + AV +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 314 YC----AMAKRYATDIGFAVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 LDVL-NLLEKGTNLF 465 + V LL++G L Sbjct: 370 MIVARRLLQEGAQLL 384 >gi|240140922|ref|YP_002965402.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1] gi|240010899|gb|ACS42125.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1] Length = 587 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++A+ ++ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DGS N L +++K+G ++ T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AA+ + + A D A +AA+ R ++ P+ K + +A V + Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470 ++ GG G++EE A+ R++ I G+ +D++ L G + Q+ S Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457 >gi|307941476|ref|ZP_07656831.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp. TrichSKD4] gi|307775084|gb|EFO34290.1| acyl-CoA dehydrogenase domain-containing protein [Roseibium sp. TrichSKD4] Length = 598 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL + + + P + S + T + LTE GT Sbjct: 126 MYPGLTAGAIAALTQHGSQEQKEKYLPNMISGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ DG Y +SG K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGLIRTKAIPNGDGSYKISGTKIFISAGDHDLSENIIHLVLARIEGAPQGTKGISLFVV 232 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + +DGS NG+ +++K+G SNAT + + G+L+G+ N + M Sbjct: 233 PKFAVADDGSVGASNGVSCGSIEHKMGIHSNATCVMNYDEATGWLVGEENKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L A+ +S V+ A+ YA+ R +SG +I P ++R + Sbjct: 293 NEARLGVAVQGLSQSEVAYQNAVAYAKDRLQGRSLSGPKSPDKAADPIIVHPDVRRTLMS 352 Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + TA+ +++ ++ K+R +M P+ K + A A Sbjct: 353 IRSFNEAARALVLWTAMHGDISHHAEDEKTRQAADDVMGLMTPVLKGVLTDIGFANTVNA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYI+E + + R++ I G+ LD++ Sbjct: 413 QQMFGGHGYIQEWGMEQFVRDARIAMIYEGANGIQALDLV 452 >gi|254485501|ref|ZP_05098706.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101] gi|214042370|gb|EEB83008.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. GAI101] Length = 571 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 59/347 (17%) Query: 150 HLMSPSVTSASMVALMTTPRVH----------KD-WAPKIFSREYDPTNKAPMQKTSVAI 198 +MS + S + LM+ ++ KD + PK+ S E+ T Sbjct: 113 EMMSGACLSLQLAPLMSQGQIEALEHHASDAIKDLYLPKLISGEWTGT------------ 160 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR- 252 + LTE + G+D+ A+ S+ + DG + +SG K ++S +D ++LA++ G Sbjct: 161 -MNLTEPQAGSDVGALASKAEDNGDGTFSISGQKIYISWGDNDFAENVCHLVLARLPGAP 219 Query: 253 -----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + FLVP++L + G N L L++K+G + T +++ G+L+G Sbjct: 220 AGTKGISLFLVPKILPNDDGTLGKANSLKVVSLEHKMGLHGSPTCVMQYDQATGWLVGP- 278 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG-------GILI 350 G + M +++A + V + +AE A+ YA R G ++ Sbjct: 279 --EQGGMAAM--FTMMNNARLGVGEQGIGVAEGAYQHALAYALDRKQGKTSTADGTGSIV 334 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMA 408 D ++R + + D AA A++ A + D A ++ + A + PI K + Sbjct: 335 DHADVRRMLMTMKADTFAARAIALSCAVAIDMTNATGEADWKSRAAFLTPIAKAFGTDTG 394 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 AV ++ GG G IEE A++ R+ +I G+ +D++ Sbjct: 395 IAVSETGVQVHGGMGVIEETGAAQYCRDVRVTAIYEGTNGIQAMDLV 441 >gi|240139993|ref|YP_002964470.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1] gi|240009967|gb|ACS41193.1| acyl-CoA dehydrogenase [Methylobacterium extorquens AM1] Length = 596 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+ +P + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y L+G K F+S+ D +++A++EG + F+V Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + +++K+G +N+T + + G+L+G N + M Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361 L + + + A+ YA+ R ++G D+ P ++R + Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVTYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + AA TAL+ +A+ +A R +M P+ K A EA Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GY+EE +++ R++ I G+ +D++ L +D Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504 G + +T ++ I ED+G+ F+ Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488 >gi|115524259|ref|YP_781170.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518206|gb|ABJ06190.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris BisA53] Length = 379 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + + ++ D Y ++G K F++S M +I A G G V Sbjct: 125 LAITEPSGGSDVANLRTSAKRDGDD-YVVNGEKTFITSGMRADYITTAVRTGGPGPGGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 L+ G GL LK K+G ++ T L F N G LLG + I++ Sbjct: 184 LLVIPGDTPGLTRTPLK-KMGWWASDTATLHFDNCRVPAGNLLGTEGAGF-----LIIMM 237 Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S +S++ +V L EAI YA+ R G L+ V++ + D+A IAA+ A Sbjct: 238 NFNSERISMAAGCTAASKVCLDEAIAYAKERVTFGKPLVKHQVIRHKLVDMAQRIAASQA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA ++ ++ E + A T +C +EA++ GG+GY+ + Sbjct: 298 MLEMLAWRLEQGENPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGYMRGVKVE 350 Query: 432 RHYRESPANSILLGSGNAM 450 R YR+ N+I G+ M Sbjct: 351 RIYRDVKVNAIGGGAEEIM 369 >gi|163795653|ref|ZP_02189619.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium BAL199] gi|159179252|gb|EDP63785.1| acyl-CoA dehydrogenase domain protein [alpha proteobacterium BAL199] Length = 380 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 27/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ ++ +K+ + Y L+G K F+S + SD + ++ + G V C Sbjct: 124 LTEPGSGSDAAALKTKAEKVGNSHYMLNGGKAFISGAGTSDVYAVMCRTGGDGPKGVSCI 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 LV E +P GL + + + K+G S T + F N G ++ + Sbjct: 184 LV----EKDTP-GLSFGKKERKLGWNSQPTAMVTFEDCKVPAENLVGTEGEGFRIAMQGL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A S+ G R +L +A+ Y + R G + D + +AD+A ++ AA Sbjct: 239 DGGRINI----AACSLGGARAALEQALSYVKERKQFGKSIADFQATQFRLADMATELDAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+ R A S D AKS A + A + K + + ++ EA++ GG GY+++ Sbjct: 295 RLLTHRAAASLD-AKSPD-----ATLHAAMAKRFATDIGFKIVDEALQLHGGYGYLKDFP 348 Query: 430 IARHYRESPANSILLGSGNAM 450 + R R+ + IL G+ M Sbjct: 349 VERLLRDLRVHRILEGTNEIM 369 >gi|319795700|ref|YP_004157340.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315598163|gb|ADU39229.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 586 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 51/351 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252 LTE G+D+ + ++ +DG + +SG K F+S D ++L ++ G Sbjct: 164 LTESHAGSDLGQVRTRAVPQADGSFRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPAGP 223 Query: 253 VGCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G LV P+LL DG+ N + +R++ K+G + T + F + G+L+G+ + Sbjct: 224 KGLSLVLMPKLLPDGARNAVHCERIEEKMGLHGSPTCSMRFDDATGWLVGEAGRGLAAMF 283 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG------------ILIDQPVMK 356 M L A+ + + + +A YA RR+ + G ++ + P ++ Sbjct: 284 VMMNSARLHVALQGIGLLDAAWQKADAYAAERRQMRAPGAVPANRGTEAADLIAEHPAIR 343 Query: 357 RAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPA 410 R + I A L++R A D A K+R + ++ P+ K C A Sbjct: 344 RILDTQRAWIDGARTLAYRSALMLDVAAHDADPKARERAQRWCSLVTPVLKAACTHQAFH 403 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 +E ++ GG GY+ E I + R++ I G+ +D+ L Sbjct: 404 GASECLQVFGGHGYVREWGIEQVVRDARVTMIYEGTNEIQAIDL-------------LVR 450 Query: 471 TLEQDLGSSGKKVITILRDSISLCKE-----DKGLA--RFLTEKIALASSA 514 + D G++ V+ LRD++ +E + LA R+L IA+++ A Sbjct: 451 KVLPDGGAAMSAVLLELRDTLDASREADADVQRRLAQLRYLGTTIAMSAHA 501 >gi|218531501|ref|YP_002422317.1| acyl-CoA dehydrogenase domain protein [Methylobacterium chloromethanicum CM4] gi|218523804|gb|ACK84389.1| acyl-CoA dehydrogenase domain protein [Methylobacterium chloromethanicum CM4] Length = 596 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+ +P + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y L+G K F+S+ D +++A++EG + F+V Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + +++K+G +N+T + + G+L+G N + M Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361 L + + + A+ YA+ R ++G D+ P ++R + Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + AA TAL+ +A+ +A R +M P+ K A EA Sbjct: 353 IRAFNEAARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVLTDRGFANAVEA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GY+EE +++ R++ I G+ +D++ L +D Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504 G + +T ++ I ED+G+ F+ Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488 >gi|288957345|ref|YP_003447686.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] gi|288909653|dbj|BAI71142.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] Length = 598 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 59/333 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+AA+ ++ + DG Y ++G K F++ +++ I L A Sbjct: 161 MNLTEPQAGSDLAAVRTRAARAGDGSYRITGQKIFITYGEHDLTENIIHLVLARLPDAPA 220 Query: 248 QVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 ++G + F+VP+ L DG+P N L L++K+G ++ T + + + G+L+ Sbjct: 221 GIKG-ISLFIVPKFLPEADGTPGRRNDLRCASLEHKLGIMASPTAVMAYGDDEGAIGYLV 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR---------HVS 345 G+ N +E M +++A + V V++AE A YA+ R S Sbjct: 280 GEENRG---IEYM--FTMMNNARLGVGIQGVAIAERAYQQARDYAKSRVQSKDLADPKGS 334 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPI 399 G +I P ++R + D+ AA AL+ D +A R+ A ++ PI Sbjct: 335 GVAIIKHPDVRRMLLDMRAKTEAARALALYAGTQLDISRHHADATVRAAALARVDVLTPI 394 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K W + V + ++ GG G+IEE A+HYR++ I G+ Sbjct: 395 VKAWSTDIGCEVASTGVQIHGGMGFIEETGAAQHYRDARITPIYEGT------------- 441 Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 G + + F +D G++ + + +R +++ Sbjct: 442 NGIHGNDLTFRKTGRDKGAAARAFVADMRATVA 474 >gi|254562420|ref|YP_003069515.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4] gi|254269698|emb|CAX25670.1| acyl-CoA dehydrogenase [Methylobacterium extorquens DM4] Length = 596 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 62/389 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+ +P + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y L+G K F+S+ D +++A++EG + F+V Sbjct: 173 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + +++K+G +N+T + + G+L+G N + M Sbjct: 233 PKFLVNADGSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIAD 361 L + + + A+ YA+ R ++G D+ P ++R + Sbjct: 293 NEARLAVGVQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQ 352 Query: 362 I-ALDIAAAT-----ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + AA T AL+ +A+ +A R +M P+ K A EA Sbjct: 353 IRAFNEAARTLMLWTALNSDIAHRSQDAAERQAAEDMLGLMTPVVKGVLTDRGFANAVEA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GG GY+EE +++ R++ I G+ +D++ L +D Sbjct: 413 QQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG-------------RKLPKD 459 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFL 504 G + +T ++ I ED+G+ F+ Sbjct: 460 GGRAMMAFLTEVQTFIKDHGEDEGMKPFV 488 >gi|160875501|ref|YP_001554817.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS195] gi|160861023|gb|ABX49557.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195] gi|315267688|gb|ADT94541.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS678] Length = 585 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ DG Y ++G K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRALPQDDGSYAITGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ DGS NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPDSKGISLFLVPKISVNADGSLANANGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + F N GFL+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNFDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 R+ +GG +I ++R + I A ALS D AK +E Sbjct: 318 RNQGVAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYAQDEV 377 Query: 390 ----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 A Y ++ P+ K + A + GG GYI E I + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|163853502|ref|YP_001641545.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium extorquens PA1] gi|163665107|gb|ABY32474.1| acyl-CoA dehydrogenase domain protein [Methylobacterium extorquens PA1] Length = 587 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 27/298 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++A+ ++ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSALRTRAEAQGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DGS N L +++K+G ++ T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGSRNDLRCSGIEHKLGIHASPTCSMAFGDAGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGSPEPVSAIVAHADIQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AA+ + + A D A +AA+ R ++ P+ K + +A V + Sbjct: 340 TLLTMKAYTAASRGICYLTAQGLDAADGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470 ++ GG G++EE A+ R++ I G+ +D++ L G + Q+ S Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLNGGATVGAQIAS 457 >gi|271967132|ref|YP_003341328.1| acyl-CoA dehydrogenase, C-terminal domain-containing protein [Streptosporangium roseum DSM 43021] gi|270510307|gb|ACZ88585.1| acyl-CoA dehydrogenase, C-terminal domain protein [Streptosporangium roseum DSM 43021] Length = 380 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256 L+E G+D AA+T++ +DG Y + G K W ++D + ++A+ GR + CF Sbjct: 127 LSEPHSGSDAAALTTRAVPDADG-YVVDGVKAWITHGGVADFYTLMARTSDDGGRGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 VP E GL Y + K+G RS+ T ++ F + L + E +I + Sbjct: 186 HVPAGTE-----GLSYGVPERKMGMRSSPTAQVRFDSV---RLASDALLGAEGEGFRIAM 237 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ V +A+A YA+ R G + D + +AD+A IAAA Sbjct: 238 AALDGGRLGIAACAVGVAQAALDAATGYAKERRQFGSRIADFQGVGFMLADMATQIAAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + +AA A++ A M V +A++ +GG GY+E+ + Sbjct: 298 ALYLDAARLRDAGRPYGTQAAMAKLFA-------TDMCMKVTTDAVQVLGGYGYVEDFPV 350 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 351 ERYMREAKVLQIVEGT 366 >gi|116695276|ref|YP_840852.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113529775|emb|CAJ96122.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 521 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 54 LCPMLTDGAIEALLTAGSDAQKATFLPKLISGEWTGT-------------MNLTEPQAGS 100 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 101 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAQNIVHLVLARTPNAPEGVKGISLFIV 160 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 161 PKFLVNDDGSTGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 217 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I ++SA SV ++++E A+ +AR R S + +I P +K Sbjct: 218 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVK 275 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A+ + A +A A + A+ + R + A+ M P+ K W +++ Sbjct: 276 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRGQSQAFYEFMVPVVKGWSTELSID 335 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+HYR++ Sbjct: 336 VTSLGVQVHGGMGFIEETGAAQHYRDA 362 >gi|153837593|ref|ZP_01990260.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus AQ3810] gi|149749090|gb|EDM59901.1| acyl-CoA dehydrogenase family member 8 [Vibrio parahaemolyticus AQ3810] Length = 384 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T V + PK+ + E+ LG LTE G+D A++++ Sbjct: 96 MVASFATEDVRAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLSTT 139 Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K D Y L+G K F+S + +D +++A+ G G V + +G+ Y R + Sbjct: 140 AHKKGD-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQADGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G + MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D S Sbjct: 256 LNQATQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDSD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + + +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|119897993|ref|YP_933206.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119670406|emb|CAL94319.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 599 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T+ ++ AL+ + + PK+ S E+ T + LTE + G+ Sbjct: 126 LCPMLTTGAIEALLLRGNDEQKAMYLPKMVSGEWTGT-------------MNLTEPQAGS 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ ++D I +LA++ EG G F+V Sbjct: 173 DLAAVRTRAEPQGDGTYRIFGQKIFITYGEHDLTDNIIHLVLARLPDAPEGVKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + + G+ N + +++K+G ++ T L F + G L+G+ N +E Sbjct: 233 PKFMVNADGSLGARNDVECVSIEHKLGIHASPTCVLAFGDKGGAIGTLVGEANRG---LE 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGG---ILIDQPVMK 356 M I ++ A +V ++L+E A+ YA+ R V GG +I ++ Sbjct: 290 YM--FIMMNEARFAVGMEGLALSERAYQHALAYAKDRVQGTEAGVRGGPKVSIIHHADVR 347 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPA 410 R + + A AL++ + + D A ++EA A+ +M P+ K WC + + Sbjct: 348 RMLMSMKSQTEAMRALAYVVGAATDLAHHHADEAVRASNQAFVDLMIPVVKGWCTENSIE 407 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + ++ GG G+IEE A+H R++ SI G+ Sbjct: 408 IASTGVQVHGGMGFIEESGAAQHLRDARITSIYEGT 443 >gi|163734515|ref|ZP_02141954.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och 149] gi|161392008|gb|EDQ16338.1| acyl-CoA dehydrogenase family protein [Roseobacter litoralis Och 149] Length = 593 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251 + LTE GTD+ + ++ + +DG Y L+G K F+S+ D ++LA++ G Sbjct: 161 MNLTEPHCGTDLGLMRTKAEPQADGSYTLTGQKIFISAGEHDMSSNIIHLVLAKIPGGPE 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + +DGS N + +++ K+G N+T + + G+LLG+ + Sbjct: 221 GIKGVSLFIVPKFIVKDDGSLGERNAVAVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILID 351 + M L + +S + A+ YA+ R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGMQGMSQAAAAYQNALEYAKDRLQGRDVTGEKNPDGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEA-AYARIMAPITKYWCCKMAP 409 P ++R++ D + A A A D A +S ++A ++ P+ K + Sbjct: 341 HPDIRRSLMDQKSFVEGARAFMLWGATMIDAAHRSHDKDADGLVSLLTPVIKGFLTDQGY 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + +A + GG GYIEE +++ R++ I G+ LD++ Sbjct: 401 DMTIKAQQVYGGHGYIEEWGMSQFTRDARIAMIYEGANGVQALDLVG 447 >gi|295701069|ref|YP_003608962.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295440282|gb|ADG19451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 594 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 56/361 (15%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 LMSP +T + L T + RV + PK+ S E+ T + LTE + G Sbjct: 126 LMSPGLTHGATACLQTHGSERVKTELLPKVASGEWLST-------------MCLTEPQAG 172 Query: 209 TDIAAITSQGQKI--SDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255 +D+ I S+ + +DG Y + G K F+S D ++LA++ G G Sbjct: 173 SDVGLIRSRAAQAPGTDG-YFIDGSKIFISGGAHDLTENIVHLVLARLPDAPSGTKGLSL 231 Query: 256 FLVPRLLEDG----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 F+VP LEDG S N + + ++ K+G + + T + F FG+L+G+ + + Sbjct: 232 FVVPEWLEDGDGGRSRNAVYCEGIEKKMGLKGSPTCTMRFERAFGWLVGEPHRGLACLFV 291 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILID---------QPVMK 356 M L A+ + + A YA+ R V G + P M+ Sbjct: 292 MMNAARLQVAMQGLGHAHTAWQRAHAYAQERAQMRAVSVPPGATVPAGQAAPIAFHPAMR 351 Query: 357 RAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPA 410 R + ++ + A+ + A+ D A R + A +A ++ P+ K + Sbjct: 352 RILMELRAIVEGERAIGYWTAHWLDIAAHHADAAEREQAAQFASLLTPVAKAFFTANGFD 411 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQL 468 ++A++ GG GYI E I + R+S + + G+ +D+L +L G + L Sbjct: 412 AASKALQVFGGYGYIHEYGIEQTLRDSRVSMLYEGTNEIQAIDLLVRKVLPDGAGALDAL 471 Query: 469 F 469 Sbjct: 472 L 472 >gi|218781160|ref|YP_002432478.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762544|gb|ACL05010.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 602 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 55/320 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A+T+ K DG Y ++G+K F+S+ D +LA++EG Sbjct: 164 LTEPEAGSDVGALTTTAVKNEDGTYNITGNKIFISAADHDLVDNVVHPVLARIEGDPAGT 223 Query: 253 --VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + FLVP+ + EDG+ N + R++ K+G ++AT ++F G LLG+ Sbjct: 224 SGISIFLVPKYWVNEDGTTGDYNNVYVDRIEEKMGIHASATCSVQFGAKGPCRGLLLGEE 283 Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRR------------HV 344 + M+I+ + L+ + + + A++YAR R Sbjct: 284 R------KGMRIMFHMMNEERLNVGVQGLGSASAAFLLALNYARERVQGKEILKSRDPEA 337 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARI---MAP 398 G +I+ P ++R + + + +L++ D+ ++S E++ Y I + P Sbjct: 338 KGATIINHPDVRRMLLQMKAYVEGLRSLNYYTGYCMDKVVTSESDEEKSLYQGIVDLLTP 397 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL- 457 I K + + + V +A++ GG G+ +E + + R++ +I G+ D+L Sbjct: 398 ICKGYTTEKSVLVCNDAIQTYGGYGFTKEYPVEQLARDTKILTIYEGTTGIQAADLLGRK 457 Query: 458 --LEKGT---NLFEQLFSTL 472 ++KG EQ+ +T+ Sbjct: 458 LGMQKGQVFMKFLEQINATI 477 >gi|288931943|ref|YP_003436003.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] gi|288894191|gb|ADC65728.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] Length = 383 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 132/297 (44%), Gaps = 33/297 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236 F E P + AI G TE G+D+ AI ++ +K D + ++G K F++ Sbjct: 101 FGSEEQKEEVLPKVASGKAITAGCYTEPEAGSDLTAIRTKAEKDGDE-WVINGTKTFITN 159 Query: 237 SPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +P++D F++LA + R F L + GL ++ K G RS+ T E+ F Sbjct: 160 APIADYFVVLAVTDPNAQPRYRGFTT--FLVRKNAEGLKINKITGKFGIRSSPTAEVSFK 217 Query: 293 N---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344 + + ++G LN ++L + D + + ++ + +A+ I Y ++R Sbjct: 218 DVRVSEEDVIGQLNRGF-----YQVLEFFDGSRIEIAAQAIGIAQGALDKTISYVKQRKQ 272 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + ++ IAD+A + A L ++ A +D + + + KY+ Sbjct: 273 FGQPIGAFQALQHRIADMAAQLEACRLLVYKAAWKYDRGEIDP-------ALTSMAKYYA 325 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 K+A + EA++ GG GYI E + R YR++ I G+ LN + KG Sbjct: 326 GKLAVRICDEAIQMHGGYGYIAEYDVERFYRDAKITEIYEGTKEIQ----LNTIAKG 378 >gi|186475154|ref|YP_001856624.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184191613|gb|ACC69578.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 595 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ S E+ T + LTE GTD+ + ++ + DG Y Sbjct: 144 TPELKQAYLPKLVSGEWTGT-------------MCLTEPHCGTDLGILRTKAEPKGDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGL 270 +SG K F+SS D ++LA++ + F+VP+ + D G+P NG+ Sbjct: 191 AISGTKIFISSGEHDLADNIVHLVLARLPDAPHGTKGISLFVVPKFVPDANGNPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+L+G+ N + M L + + V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R +I P ++R + A A ++ A Sbjct: 311 AYQNSLIYAKERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTQKAYAEGARAFTYWSAL 370 Query: 379 SFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S ++EA ++ PI K + A AM+ GG G+I E + + Sbjct: 371 HIDKELSHADEAVRKDAADLVALLTPIIKAFLTDNAFEGTNMAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ + LD+L Sbjct: 431 YVRDARINMIYEGTNSIQSLDLL 453 >gi|319652848|ref|ZP_08006954.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317395425|gb|EFV76157.1| butyryl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 591 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 46/307 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 + TP + + PK+ S EY IG LTE G+D A++SQ Sbjct: 122 ITYFGTPEQKEKYLPKLASGEY--------------IGAYCLTEPNAGSD--ALSSQTTA 165 Query: 221 I--SDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + +G Y L+G K ++++ + SD FI+ A+V+G+ + ++E +P GL + Sbjct: 166 VLNQEGTHYILNGTKIYITNAVFSDTFIVYAKVDGQ---YFTAFIVERDTP-GLSLGPEE 221 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMR 329 NK+G + ++T + F + LLG+ V G + + +L L SA M S + Sbjct: 222 NKMGIKGSSTRSVIFEDCPVPANQLLGE--VGKGHIIALNVLNLGRFNLGSACMGAS--K 277 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 L +AI + R G + D P K IA +A I AA +L +R AN +E+ + + Sbjct: 278 TGLKKAIQFTGERKQFGKSIADFPATKEKIAKMAGRIYAAESLQYRTANLLEESLADLYD 337 Query: 390 AAYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ +++ I K + + E ++ GG+G+I+E + + YR+S Sbjct: 338 SSDLKLIGKRMSEYATECAICKVFGSETLDYAADEVLQLHGGAGFIKEYGVEQMYRDSRI 397 Query: 440 NSILLGS 446 N I G+ Sbjct: 398 NRIFEGT 404 >gi|299768636|ref|YP_003730662.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter sp. DR1] gi|298698724|gb|ADI89289.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter sp. DR1] Length = 607 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSYQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRLLLT 352 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + +LA+ +A +R ++AAY PI K + ++ Sbjct: 353 QKAIAEGGRSMIYHAAKLADKMTDALTRGDQAAYEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ +++ G+ LD++ Sbjct: 413 NNGMQVYGGHGYIKEWGMEQIARDARISTLYEGTTGIQALDLIG 456 >gi|295675473|ref|YP_003603997.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295435316|gb|ADG14486.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 595 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ + + T + LTE GTD+ + ++ + DG Y Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 SISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G NAT + N G+++G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNATCVINLDNAKGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A S+ A Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGRAFSYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 QIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNGIQSLDLL 453 >gi|269967501|ref|ZP_06181557.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] gi|269827883|gb|EEZ82161.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] Length = 384 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+T+ K D Y L+G K F+S + +D +++A+ G G V Sbjct: 124 LTEPNAGSDAAALTTSATKKGDK-YVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316 + +G+ Y R + K+G S T + F N LLG+ G V MK L Sbjct: 182 FVVPAHADGISYGRKEPKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFVFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L +A Y + R G L ++ +AD+A ++ AA L Sbjct: 240 GRINIATCSVGTAQQALNQAARYIQERKQFGKPLAQFQALQFKLADMATELVAARQLVRY 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A+ D ++ + AY + K + + V +A++ GG GYI+E + RH+R Sbjct: 300 AASKLD--RNDPDATAYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|254229385|ref|ZP_04922801.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25] gi|262396842|ref|YP_003288695.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25] gi|151938076|gb|EDN56918.1| Acyl-CoA dehydrogenase [Vibrio sp. Ex25] gi|262340436|gb|ACY54230.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25] Length = 384 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 22/302 (7%) Query: 160 SMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITS 216 S A MT +H W F+ + T P T +G LTE G+D AA+T+ Sbjct: 82 STTAFMT---IHNMVSWMIASFATDEAKTQFCPKLVTGEWLGSYCLTEPNAGSDAAALTT 138 Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275 K D Y L+G K F+S + +D +++A+ G G V + G+ Y R Sbjct: 139 SATKKGDK-YVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQAGGISYGRK 196 Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRV 330 + K+G S T + F N LLG+ G V MK L ++ A SV + Sbjct: 197 EPKMGWNSQPTRAVTFENVVVPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQ 254 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L +A Y + R G L ++ +AD+A ++ AA L A+ D ++ + Sbjct: 255 ALNQAAWYIQERKQFGKPLAQFQALQFKLADMATELVAARQLVRYAASKLD--RNDPDAT 312 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 AY + K + + V +A++ GG GYI+E + RH+R+ + IL G+ M Sbjct: 313 AYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTNEIM 368 Query: 451 VL 452 L Sbjct: 369 RL 370 >gi|167623980|ref|YP_001674274.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354002|gb|ABZ76615.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length = 586 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 35/297 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 +G+TE + G+D+ I ++ DG Y ++G K F++ D ++LA++ G Sbjct: 164 MGMTEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G NG+ +++K+G + ++T + F + G+L+G N G Sbjct: 224 ISLFLVPKIKVDADNSLGDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRAN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352 V ++ Y AI + G+ S A A YA+ R +GG IL+ Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGASIDPILVHG 340 Query: 353 PVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 V + RA+ + ++ T L LA +++ ++++ + Y ++ P++K + Sbjct: 341 DVRRMLLTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDR 400 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 A + GG GYI E I + R++ I G+ +D L G N+ Sbjct: 401 GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNV 457 >gi|113868125|ref|YP_726614.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha H16] gi|113526901|emb|CAJ93246.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha H16] Length = 386 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 17/274 (6%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM- 239 RE+ P M V + +TE G+D+ AI + K+ DG Y L+G K F+++ Sbjct: 118 REFLPR----MASGDVVGSIAMTEPGAGSDLKAIRTSAVKV-DGGYRLNGQKTFITNGYH 172 Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296 +D ++ A+ E G + D + G RL +KIG ++ T EL F + Sbjct: 173 ADRVLVFAKTEPAAGARGISLFWVDTTSPGFSRGRLLDKIGQKAQDTAELFFEDVLVPDD 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+G+ N G + L A+ + V+L I + + R LID ++ Sbjct: 233 MLVGERNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIAHVKERRAFDKALIDNQFIR 292 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+I A A + + AA A KYW + A I + M Sbjct: 293 FRLAEIKTHACATRAFVDSCLEQYLAGTLTPDGAAMA-------KYWAGE-ATRAIDDLM 344 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E IAR Y + N I GS M Sbjct: 345 QFFGGYGYMREYPIARAYTDVRPNRIYGGSAEIM 378 >gi|121603717|ref|YP_981046.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120592686|gb|ABM36125.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 563 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 39/345 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ +++ DG + +SG K F+S D ++LA++ G Sbjct: 166 LTEPHAGSDLGLASTRAVPQPDGSFQISGTKIFISGGEHDLSDNIVHLVLARLPDSPSGP 225 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G FLVP+ EDGS + + +R++ K+G + T + F G+L+G+ + Sbjct: 226 KGLSLFLVPKFYEDGSRSAVFCERIEEKMGLHGSPTCVMRFDQATGWLVGEHGKGLNAMF 285 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-----------VSGGILIDQPVM---- 355 M L A+ V + + +A YA+ R + ++I P + Sbjct: 286 LMMNAARLHVALQGVGLLDAAWQKADAYAQERRQMRAPGPRDPSQAADLIIRHPAVQRLL 345 Query: 356 --KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 +RA D +A TA+ +A + R + + ++ P+ K A + Sbjct: 346 DTQRAWVDAGRLLAYQTAIELDVAKHHPDPARRQQAGQWCALVTPVLKASWTDQAFHGSS 405 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 + ++ GG GY+ E I + R+S AM+ + N ++ LF ++ S Sbjct: 406 DCLQVFGGHGYVREWGIEQIVRDSRV---------AMIYEGTNEIQAQDLLFRKVLSDQG 456 Query: 474 QDLGS--SGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516 + LG+ SG + +S S + +G AR A+ SS A Sbjct: 457 RGLGAVLSGLQADLQGGNSASAQRTQEGFARLRDLLAAIESSGGA 501 >gi|257455691|ref|ZP_05620920.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] gi|257446974|gb|EEV21988.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] Length = 606 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 70/397 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ M +M TP + P + + T + LTE + GT Sbjct: 127 MYPGLSVGCMNTIMQYGTPEQKATYMPALVEGRWSGT-------------MCLTEPQCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ DG Y +SG K F+SS D I+LA++ EG G F+V Sbjct: 174 DLGQVKTKAIPQDDGTYKISGTKIFISSGEHDLTENIVHIVLARLPDAPEGTKGISLFIV 233 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + +++K+G +++AT L F N G+L+G+ N + Sbjct: 234 PKFLVTENGDIGERNPVNCGSIEHKMGIKASATAVLNFDNATGYLIGEPNKGLKAMFTFM 293 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 L + + ++ M ++ ++ YA+ R V+ I+ V + + Sbjct: 294 NTARLGTGMQGLAHMELAFQNSLPYAKERRSMRTLSGTKEPNQVADAIIHHADVARMLLT 353 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A A + + + R A+ E ++A + + PI K + +++ Sbjct: 354 QKAFSEGARSMIYHASRYADKMFEGAMLGDDAEFHKWDDKLGFYTPILKGFLTELSIECA 413 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 M+ GG GYI+E + + R++ +++ G+ LD+L G + Q Sbjct: 414 KHGMQIYGGHGYIKEWGMEQIARDARISTLYEGTTGVQALDLL-----GRKVLIQ----- 463 Query: 473 EQDLGSSGKKVITILRDSISLCKE---DKGLARFLTE 506 S GK ++ + + C E DKG+ +F+ E Sbjct: 464 -----SKGKVLLDYTANIMKWCSEYALDKGMRKFVWE 495 >gi|103487794|ref|YP_617355.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98977871|gb|ABF54022.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 391 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 16/267 (5%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ I LG+TE GG+D+A + + + D Y ++G K F++S M ++ A Sbjct: 124 PVLAGEKIIALGITEASGGSDVANLRTTAVRDGDS-YIVNGDKMFITSGMRADWLTCAVR 182 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 G G + LL D G+ RL +K+G R + T + FS+ L+G N Sbjct: 183 TGGPGAGGISLLLIDMDSPGVERTRL-DKMGWRCSDTAAIHFSDVRVPVENLIGPEN--G 239 Query: 307 GPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G + M+ L A+ + RV++AEA +A+ R G L+ ++ +AD+ Sbjct: 240 GFIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMER 299 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I A A A E K R + A ++ A +M AV EA + +GG+ Y Sbjct: 300 QIEATQAWVDLCAWQVKEGKDRPADFAMLKVQA-------TRMLEAVAREAAQVLGGASY 352 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 I + R YRE N+I GS M+ Sbjct: 353 ITGSKVERIYREVRVNAIGGGSEEIML 379 >gi|301059293|ref|ZP_07200220.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300446522|gb|EFK10360.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 375 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 34/262 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGC 255 +G +TE G+D+ AI +K D Y L+G K F ++ ++ + +LA+ E + Sbjct: 120 MGYLVTEPEAGSDVQAIRCTARKSGDH-YVLNGRKVFATNGSVAGLYSVLAKTGEKELSF 178 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVE 310 F+V R E G+ R++ K G R + T E+ +L D+ V P E Sbjct: 179 FMVERDRE-----GISIGRIEEKCGFRGSNTAEV--------ILEDVKVPAENLIGRPGE 225 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + D + +V+ + + LAE + YAR R G LI+ ++ +AD A Sbjct: 226 GFKIAMGDFDMSRPAVAALSLGLAEGALDYTVEYARNRQTFGKPLIEHQAIQFLLADAAT 285 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I A+ L + A +FD + ++ +A + K++C A + + ++ +GG GY Sbjct: 286 LIEASRGLMEQAAVAFDSGRKNTK-------LASMAKFFCSDAAMKITTDMVQVLGGYGY 338 Query: 425 IEERSIARHYRESPANSILLGS 446 I + I R +R++ I G+ Sbjct: 339 IRDYPIERMFRDAKLTQIFEGA 360 >gi|52138966|gb|AAH82665.1| LOC494679 protein [Xenopus laevis] Length = 438 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 32/273 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ + QK D Y ++G K W +S + F+++A G C Sbjct: 182 LSEAESGSDAFSLRTNAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 240 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+VP+ E G + ++K+G R+++T L F N +LG L +M Sbjct: 241 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESSILGQLGHGYKYAIEM 295 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ + ++ + LA+ I Y ++R G +ID M+ I+ +A + Sbjct: 296 -----LNEGRIGIAAQMLGLAQGCFDHTIPYTKQRVQFGKRIIDFQGMQHQISQVATQLE 350 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L++ A + + +EA A KY+ ++A ++ +E +GG GY ++ Sbjct: 351 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFASEVACLTTSKCIEWMGGVGYTKD 403 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I +++R+S +I G+ N + + L+E+ Sbjct: 404 YPIEKYFRDSKIGTIYEGTSNIQLSTIAKLIEQ 436 >gi|150395373|ref|YP_001325840.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium medicae WSM419] gi|150026888|gb|ABR59005.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae WSM419] Length = 598 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 100/426 (23%), Positives = 178/426 (41%), Gaps = 86/426 (20%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ A++ + + + PK+ + T + LTE G Sbjct: 125 MMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGT-------------MNLTEPHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ + ++ DG Y +SG K F+S+ D ++LA++EG + F+ Sbjct: 172 TDLGLLRTRAVPNGDGSYRISGQKIFISAGEHDMAENIVHLVLARIEGAPDGVKGISLFI 231 Query: 258 VP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP RL G P NG+ +++K+G NAT + + G+L+G N Sbjct: 232 VPKFRLDAGGEPSERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLS----- 286 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------GILIDQPVM 355 + + ++ A ++V +S+AE A +YAR R +SG +I P + Sbjct: 287 AMFVMMNEARLAVGMQGLSIAEVAYQNAANYARDRIQGRSLSGPKSPDKKADPIIVHPDI 346 Query: 356 KRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYA-----RIMAPITKYWCCKMAP 409 +RA+ I A + A D A +S SEE +M PI K Sbjct: 347 RRALLTIKAFNEGGRAFTLWTALKSDIAHRSESEEERQTADDILSLMTPILKGVLTDKGF 406 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + GG GYIEE ++++ R++ I G+ LD++ G L Sbjct: 407 DHAVMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV-----GRKLAL--- 458 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADV- 528 + G+ V+ + ++ C+E++ EK++ + A + G+ND+ Sbjct: 459 --------NGGRAVMALFKEIGDFCEENRN-----DEKLSAYTKA---LKKGLNDLQSAT 502 Query: 529 --FLEN 532 F++N Sbjct: 503 MWFMQN 508 >gi|119502971|ref|ZP_01625056.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119461317|gb|EAW42407.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 388 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 92/382 (24%), Positives = 152/382 (39%), Gaps = 47/382 (12%) Query: 97 VEFHPAWHALLRRSIHDGL--HCSIWDRSFEPVVRKQAHKIRAARLYL------------ 142 + H AW LRR I + + WD + E + L L Sbjct: 16 TDLHHAWREQLRRFIDVEIMPYADDWDEAGEIPIGLWPKAAEVGLLGLSYPEVYGGTPGD 75 Query: 143 --MAQL---EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 + Q+ E G + + + ++ MV + P + +W + E P P+ + Sbjct: 76 VWLGQITAEELGRVGAGGINASLMVHNIGLPPI-INWGSQTMKDEIAP----PILRGEAW 130 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 I LG+TE GG+D+A + + + D Y ++G K +++ M ++ A G G Sbjct: 131 ISLGITEPGGGSDVANLQTTAVRDGDD-YVVNGSKTYITGGMRANWVSTAVRTGGEGAGG 189 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGP 308 V LL G L K G ++ T L F N L+G+ N ++ Sbjct: 190 VSMLLIPTDAEGFSRTPLNRKQGWWASDTATLYFDNVRVPATQLIGEENQGFRVIMTNFN 249 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 E M + I++++A RV + EA+ +AR R G L D V++ IA + I A Sbjct: 250 SERMGMAIHMEAA------ARVCMEEAVSWARERKTFGKRLGDHQVIRHKIAMMKQKINA 303 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A S + + + A ++ A +C + EAM+ +GG G++ Sbjct: 304 TQAYIRVCNESIERGEPNPADIALLKVQASEVMEFCAR-------EAMQVLGGLGFMRGS 356 Query: 429 SIARHYRESPANSILLGSGNAM 450 R YRE N+I GS M Sbjct: 357 RTERIYREVRVNAIGGGSEEIM 378 >gi|28900477|ref|NP_800132.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|260365630|ref|ZP_05778151.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030] gi|260877430|ref|ZP_05889785.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034] gi|260898911|ref|ZP_05907352.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member 8) (acad-8) (activator-recruitedcofactor 42 kda component) (Arc42) [Vibrio parahaemolyticus Peru-466] gi|260901255|ref|ZP_05909650.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037] gi|28808857|dbj|BAC61965.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|308089187|gb|EFO38882.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member 8) (acad-8) (activator-recruitedcofactor 42 kda component) (Arc42) [Vibrio parahaemolyticus Peru-466] gi|308090576|gb|EFO40271.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034] gi|308106793|gb|EFO44333.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037] gi|308111450|gb|EFO48990.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030] Length = 384 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T V + PK+ + E+ LG LTE G+D A++++ Sbjct: 96 MVASFATEDVGAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLSTT 139 Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K D Y L+G K F+S + +D +++A+ G G V + +G+ Y R + Sbjct: 140 AHKKGD-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQADGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G + MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D S Sbjct: 256 LNQATQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDSD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + + +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDIGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|295677259|ref|YP_003605783.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295437102|gb|ADG16272.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 596 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 59/365 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQTFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257 D+A + ++ + DG + L G K F++ D ++LA+ V+G + FL Sbjct: 171 DLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIVHLVLARTPDAPDGVKG-ISLFL 229 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 VP+ L EDGS N + +++K+G +++ T L+F + G L+G+ N + Sbjct: 230 VPKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGALGQLIGEENRG---L 286 Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR 357 E M I++ + + G+ +S +A+ YA+ R S + +I P ++R Sbjct: 287 EYMFIMMNAARFAVGMQGVAISDRAYQKAVAYAKERVQSRPVDGSAKQSVAIIQHPDVRR 346 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411 ++ + A+ AL++ A D A ++A A+ + PI K W +++ V Sbjct: 347 MLSTMRSLTEASRALAYVAAAHCDIAHRHPDDATRAKHQAIYEYLVPIVKGWSTELSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469 + ++ GG G+IEE A++YR++ I G+ D++ L G + ++L Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTLRDGGKVAKELL 466 Query: 470 STLEQ 474 + + + Sbjct: 467 AGIAE 471 >gi|241202995|ref|YP_002974091.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856885|gb|ACS54552.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 598 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 51/368 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +M P +T ++ AL+ VH S E T M + + + LTE GTD Sbjct: 125 MMYPGLTQGAIAALL----VHG-------SDEQKATYLPKMVDGTWSGTMNLTEPHCGTD 173 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP 259 + + ++ +DG Y +SG K F+S+ D ++LA++EG + F+VP Sbjct: 174 LGMLRTKAVPQADGSYKISGQKIFISAGEHDLTGNIIHLVLARIEGAPEGTKGISLFIVP 233 Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + L +DG+P N + +++K+G +NAT + + GFL+G N + M Sbjct: 234 KFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMFVMMN 293 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADI 362 L + ++ ++ A YAR R +SG +I P ++R + I Sbjct: 294 EARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTI 353 Query: 363 -ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 A + A TAL +A+ + K R ++ PI K A Sbjct: 354 RAFNEAGRAFLLWTALKSDIAHRASDEKERQTADDILGLVTPILKGVMTDKGFDHAVMAQ 413 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------LNLLEKGTNLFEQLFS 470 + GG GYIEE ++++ R++ I G+ LD+ LN LF+++ Sbjct: 414 QVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKLALNGGRAAMALFKEIGD 473 Query: 471 TLEQDLGS 478 E++ G+ Sbjct: 474 FCEENRGN 481 >gi|91976675|ref|YP_569334.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91683131|gb|ABE39433.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 379 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + + ++ D Y ++G K F++S M +I A G G V Sbjct: 125 LAITEPSGGSDVANLRTTAKRDGDH-YIVNGEKTFITSGMRADYITTAVRTGGDGPGGVS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL G GL LK K+G ++ T L F N G LLG M I++ Sbjct: 184 LLLIPGDTPGLTRTSLK-KMGWWASDTATLHFDNCRVPAGNLLGQEGAGF-----MIIML 237 Query: 317 YLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +S +S ++ RV L EA YA+ R G L V++ + D+A IAA+ A Sbjct: 238 NFNSERLSMAAGCIAASRVCLDEASAYAKERVTFGKPLSKHQVIRHKLVDMAQRIAASQA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA + +S E + A T +C +EA++ GG+G++ + Sbjct: 298 MLELLAWRVQQGESPIAEICMLKNQATQTMAFCA-------SEAVQIFGGAGFMRGVKVE 350 Query: 432 RHYRESPANSILLGSGNAM 450 R YRE N+I G+ M Sbjct: 351 RIYREVKVNAIGGGTEEIM 369 >gi|153011352|ref|YP_001372566.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151563240|gb|ABS16737.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 597 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 82/340 (24%), Positives = 146/340 (42%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ A++T T + PK+ + T + LTE GT Sbjct: 126 MYPGLTQGAIAAILTHGTDEQKDTYLPKMVEGTWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + + DG Y +SG K F+S+ MS+ I +LA+++G + F+V Sbjct: 173 DLGLLRTSAAPQKDGSYKISGQKIFISAGEHDMSENIIHLVLARIDGAPEGVKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G+P NG+ ++ K+G N+T + + GFL+G+ + + M Sbjct: 233 PKFILDENGNPGERNGVSCGSIEEKMGIHGNSTCVMNYDEAKGFLIGEAHKGLRAMFTMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361 L A+ +S + A YAR R +SG D+ P ++R + + Sbjct: 293 NEARLGVALQGLSIAETAYQNAAIYARERIQGRALSGAAAPDKKADPIIVHPDIRRNLMN 352 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + A TAL+ +A+ + R ++ P+ K A Sbjct: 353 IRAFNEAGRALILWTALNSDIAHRAGDEAERQAADDLVGLLTPVLKGVLTDKGFEHAVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 413 QQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|299533137|ref|ZP_07046522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298718914|gb|EFI59886.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 587 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%) Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252 LTE G+D+ + +Q G+ + +SG K F+S D ++LA++ G Sbjct: 164 LTEAHAGSDLGQVRTQAVPVGESEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGA 223 Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + FLVP+LL G N + +R++ K+G + T + F G+L+G Sbjct: 224 PAGPKGLSLFLVPKLLPGGERNRVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGL 283 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351 + M L A+ + + + +A YA RR+ + G ++I+ Sbjct: 284 NAMFVMMNAARLHVALQGIGLLDAAWQKAHAYALERRQMRAPGAVPASRGTGDAADLIIE 343 Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++RA D +A T + +A + A+ R + + ++ P+ K Sbjct: 344 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARDAESAREREQAQQWCSLITPVLKAAWT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 + A + ++ GG GYI E I + R+S I G+ +D+L +L G Sbjct: 404 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 463 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501 Q TL L + +LR L CKED LA Sbjct: 464 AMGQWLLTLRNSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 511 >gi|262377342|ref|ZP_06070566.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter lwoffii SH145] gi|262307795|gb|EEY88934.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter lwoffii SH145] Length = 607 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 37/291 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ + ++ + DG Y +SG K F+S+ D I+LA++ +G Sbjct: 165 LTEPQCGTDLGQVKTKAEPKEDGSYAISGTKIFISAGEHDLTENIVHIVLARLPDAPQGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + G N + +++K+G R++AT L F N G+L+G+ N Sbjct: 225 KGISLFIVPKFIAAADGGIGERNPVNCGSIEHKMGIRASATAVLNFDNATGYLIGEPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +AI + +S A+ YA+ R V+ I+ Sbjct: 285 LHAMFTFMNTARIGTAIQGICHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344 Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 V + + A+ + + ++A++ ++A R + AA+ + PI K + Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAKIADNMNDALLRGDTAAFEQHDDHLGFYTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +M M+ GG GYI+E + + R+S +++ G+ LD++ Sbjct: 405 TEMGYEASNHGMQVFGGHGYIKEWGMEQIVRDSRISTLYEGTTGVQALDLI 455 >gi|226943853|ref|YP_002798926.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226718780|gb|ACO77951.1| Acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 594 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 105/462 (22%), Positives = 193/462 (41%), Gaps = 73/462 (15%) Query: 151 LMSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T ++ +L +P + P + S + T + LTE G Sbjct: 124 VMCPGLTLGAIESLCAAASPEQKALYLPNLVSGRWSGT-------------MNLTEPDAG 170 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FL 257 +D+ A+ + + +DG Y L G K F+S D ++LA+ EG G FL Sbjct: 171 SDVGALRCKAIEQADGSYRLHGQKIFISYGEHDLTENIVHLVLARTPDAPEGVKGISLFL 230 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 VP+ L + G+ N + ++K+G + T L + + G+L+G+ N + Sbjct: 231 VPKFLVNPDGSLGARNDVRCVSTEHKLGIHGSPTCVLAYGDREGATGYLVGEKNRG---L 287 Query: 310 EDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPV-------MKRAI 359 + M +++ + I+ + G+ +S +A+ YAR R L +PV ++R + Sbjct: 288 QAMFVMMNMARLIVGLEGVALSERAYQQALDYARERIQGVDALSGEPVAIVRHPDVRRML 347 Query: 360 ADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIA 413 + I A ALS +A + D A+ R A+ ++ P+ K W + + Sbjct: 348 LSMKSQIEAMRALSLVIAQAQDLAQRHADPEVRRRNQAFVELLTPVFKAWATENGIRLTQ 407 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471 ++ GG G++EE A+H R++ I G+ D++ L G F L Sbjct: 408 LGVQIHGGMGFVEETGAAQHLRDAVIGVIYEGTTGIQAADLVGRKLARDGGAAFAALLRD 467 Query: 472 LE---------QDLGSSGKKV---ITILRDS----ISLCKEDKGLARFLTEK-IALASSA 514 + +DLG G + I LR + + L ++D A ++ + LA + Sbjct: 468 MSDVAEELQRHRDLGDIGSGLAGGIASLRQAGEHILPLYRDDAQAALAVSVPFLMLAGTV 527 Query: 515 AALYRAGMNDIADV-FLENRFLDNCHSTHCMLHGRFNAAHII 555 A ++ G +A +E R ++ RF AH++ Sbjct: 528 AGAWQHGRGALAAARLIEARGEPGAFLKGKLVSARFYVAHVL 569 >gi|138895108|ref|YP_001125561.1| butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|196248310|ref|ZP_03147011.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|134266621|gb|ABO66816.1| Butyryl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|196212035|gb|EDY06793.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 380 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 21/266 (7%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238 S E T PM K GLTE G+D + + DG Y ++G K ++++ Sbjct: 103 SEEQKQTWLVPMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNA 160 Query: 239 MSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 +++ V G+ G ++ L+ G + +K+G R++ T EL F N Sbjct: 161 QYARQVIVTAVTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV-- 218 Query: 297 FLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILI 350 + NV P + K +Y LD +S++ + V +A+A + YA+ R G + Sbjct: 219 -RVPKENVLGDPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSIS 277 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++ +AD+A++I A + ++ A D+ K ++EA++A++ A + C Sbjct: 278 KFQAIQFKLADMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN---- 333 Query: 411 VIAEAMECIGGSGYIEERSIARHYRE 436 +A++ GG GY++E + RH R+ Sbjct: 334 ---QAIQIHGGYGYMKEYGVERHLRD 356 >gi|307294247|ref|ZP_07574091.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306880398|gb|EFN11615.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 388 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 PM + + +TE G+D+ + +K ++G Y L+G K F+S+ +++ ++ A+ Sbjct: 121 PMCTGEYILAIAMTEPGAGSDLQGMKMSARK-TEGGYLLNGQKTFISNGQIANLILVAAK 179 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF----------- 295 + + G + + D G ++R +N K+G T EL F + F Sbjct: 180 TDTQAGSKGISLFIVDTEQAGDSFRRGRNLEKVGQEGQDTSELYFDDVFVPDDCVLGGAP 239 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G +G L ++ P E + I A +++ + ++AE I Y R R + G LID Sbjct: 240 GLGMGQL-MAKLPQERLVI------AWQAMAMIERAVAETIAYVRDRKMFGQALIDFQNT 292 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A+I A A F D + A + KYW A +I E Sbjct: 293 QFKLAEIK--TTATIARVF-----LDHCTRLQLDGKLDASTASMAKYWISDRASEIIDEC 345 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 ++ GG GY+ E IAR YR+S + I G+ M L Sbjct: 346 LQFFGGYGYMLEYPIARLYRDSRIHRIYGGANEVMKL 382 >gi|325968201|ref|YP_004244393.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia 768-28] gi|323707404|gb|ADY00891.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 402 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 21/273 (7%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV---GCFLV 258 TE GTDI + + +K D Y + G K F++ +P + ++LAQ E G L Sbjct: 133 TEPEHGTDITQLNTVAEKKGDK-YIIRGMKTFITNAPTAKYGLLLAQTEPEKRHRGQTLF 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ P G+ +RL K+G R+ E+ N + NV G + + Y Sbjct: 192 --IIHTDWP-GITIRRLTGKMGQRTIPVGEIYLDNV---EVPAENVLGGEEKGLNQGFYW 245 Query: 319 DSAIMSVS-------GMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 A +VS G+ ++LA +A+ YA++R+ G LI+ +++ +A +A+ I A Sbjct: 246 TLAYFNVSRIGVATLGLGIALAAFDKALEYAQKRNQFGQPLINFEMIQEKLARMAMLIEA 305 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A +L +R A D+ + +A K + ++A V+ EA++ GG GY EE Sbjct: 306 ARSLIYRAAYYVDDYLKFKIDPRAMGAIAGAAKVYGTEVANYVVDEAIQIHGGYGYFEEF 365 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + R++R+ I G+ +L + + L +G Sbjct: 366 DVERYWRDHRVTRIYEGTNEINLLTISDALRRG 398 >gi|171059219|ref|YP_001791568.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170776664|gb|ACB34803.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 596 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 138/284 (48%), Gaps = 40/284 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+AA+ ++ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLAAVRTRAEPQPDGTYKIFGTKIFITYGEHDMAENIVHLVLARVVGAPE 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ + + G N + +++K+G +++ T L+F + G L+G Sbjct: 221 GVKGISLFVVPKFMVNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGQLIG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI----- 348 N +E M I++ + V G+ V+ +A+ YAR R V G + Sbjct: 281 QENRG---LEYMFIMMNAARFAVGVQGIAVAEMAYQKAVAYARDRVQSRPVDGSVAGSAA 337 Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +I P ++R A A+ +A +A ++ ++S + ++R + A+ M P+ K Sbjct: 338 IIHHPDVRRMLSTMRAYAEGCRALALVSAAAYDASHSHPDPEARQQNQAFYEFMVPLIKG 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +M+ V + ++ GG G+IEE A+ YR++ +I G+ Sbjct: 398 FSTEMSLEVTSLGVQVHGGMGFIEETGAAQFYRDAKILTIYEGT 441 >gi|71024205|ref|XP_762332.1| hypothetical protein UM06185.1 [Ustilago maydis 521] gi|46101856|gb|EAK87089.1| hypothetical protein UM06185.1 [Ustilago maydis 521] Length = 465 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 45/284 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ + +K DG + L+G K W +S ++ FI+ AQ + G Sbjct: 205 LSEPSSGSDAFAMKTSCKKSDDGKTWTLNGSKMWITNSAEAEFFIVFAQSDASKGYKGIN 264 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F V + + G+ + + K+G R+++T L F D+ V P E++ Sbjct: 265 AFAVEKSM------GVEIAKKEKKLGIRASSTCTLNFD--------DIKV---PAENLIG 307 Query: 313 ------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 KI I L+ + ++ + LA+ AI YA R G + M+ I+ Sbjct: 308 EEGKGYKIAIEILNEGRVGIAAQMIGLAQGAVDKAIRYAADRKQFGKKITQFQGMQFQIS 367 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 I ++I AA L++ A +E + ++EAA A++ A ++A A+E G Sbjct: 368 QIMMEIEAARVLTYNAARLKEEGRPFTKEAAMAKLFA-------SQVAQRASGSAIEWCG 420 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G G+ E I +++R+S +I G+ N M+ + L+E+ +L Sbjct: 421 GVGFTRETGIEKYWRDSKIGAIYEGTSNIMLETIFKLVEREMDL 464 >gi|89092344|ref|ZP_01165298.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Oceanospirillum sp. MED92] gi|89083432|gb|EAR62650.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Oceanospirillum sp. MED92] Length = 598 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 45/295 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247 + LTE + G+D+AAI S + + D Y + G K F++ M++ I L Sbjct: 162 MNLTEPQAGSDLAAIRSTAKPVGDH-YRIKGQKIFITWGEHDMAENIIHLVLARLPDAPP 220 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 V+G + F+VP+ L +DGS N L++K+G ++ T + F + G+L+ Sbjct: 221 GVKG-ISLFVVPKFLVNDDGSLGERNDAKCVSLEHKLGIHASPTCVMAFGDDEGAIGYLV 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI------ 348 G+ N + M +++A ++V V+++E A+ YA R S + Sbjct: 280 GEENRGLACMFTM-----MNNARLAVGLQGVAISERAYQHALEYAHDRVQSPPVGSREAA 334 Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITK 401 +I ++R + + A AL++ S D A R++E+A A + PI K Sbjct: 335 PIIQHADVRRMLLTMKTMTEAGRALAYDACASLDFAHHSEDPAIRAKESARAAYLTPIVK 394 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 WC + A V + ++ GG G+IEE A+HYR++ I G+ LD++ Sbjct: 395 GWCTEFAQEVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTNAIQALDLVG 449 >gi|188583773|ref|YP_001927218.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi BJ001] gi|179347271|gb|ACB82683.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi BJ001] Length = 587 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 138/298 (46%), Gaps = 27/298 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++A+ ++ + DG Y ++G K +++ D ++LA+++ Sbjct: 160 MNLTEPQAGSDLSALRTRAEPRGDGSYRITGAKIYITYGEHDLADNICHLVLARLKDAPA 219 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + FLVP++L DG+ N L +++K+G ++ T + F + G+L+G+ N Sbjct: 220 GTRGISLFLVPKVLPDGTRNDLRCSGIEHKLGIHASPTCSMAFGDGGGATGWLIGEENRG 279 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKR 357 + M L+ + V + +A+ YAR R +PV ++R Sbjct: 280 LACMFTMMNSARLNVGLQGVGVAEAAYQKALDYARERRQGRAPGAPEPVSAIVAHADVQR 339 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEA 415 + + AA+ + + A + D A +AA+ R ++ P+ K + +A V + Sbjct: 340 MLLTMKAYTAASRGICYLTAQALDAAHGPEGKAAHDRASLLTPVAKAFSTDIANEVTSLG 399 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFS 470 ++ GG G++EE A+ R++ I G+ +D++ L G + Q+ S Sbjct: 400 VQVHGGMGFVEETGAAQLMRDARILGIYEGTNGIQAIDLVTRKLPLADGATVGAQIAS 457 >gi|212635305|ref|YP_002311830.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3] gi|212556789|gb|ACJ29243.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3] Length = 586 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 50/344 (14%) Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S+T+ + +A+ T + + + P ++S E+ A + +TE + G+D+ Sbjct: 130 SLTAGAALAIHAHGTEAIKQQYLPMMYSGEW-------------AGAMDMTEPQAGSDLR 176 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED- 264 I ++ DG Y ++G K F++ D ++LA++ G FLVP++ + Sbjct: 177 NIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVND 236 Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 G PNG+ +++K+G + +AT + F + G+L+G N G V ++ Y Sbjct: 237 DNSLGLPNGVSVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPN--RGLVCMFTMMNYERL 294 Query: 321 AIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQPVMK-----RAIA 360 AI + G+ S A A YA+ R +GG IL+ V + R + Sbjct: 295 AI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPILVHGDVRRMLLTVRTLT 353 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 + ++ T LA D +++++ + Y ++ P++K + A + G Sbjct: 354 EAGRALSVYTGQQLDLAKYSDNGEAKAKASRYVGLLTPVSKAFLSDRGLDAAIMAQQVFG 413 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G GYI E I + R++ I G+ +D L G NL Sbjct: 414 GHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 457 >gi|224371965|ref|YP_002606131.1| Acd17 [Desulfobacterium autotrophicum HRM2] gi|223694684|gb|ACN17967.1| Acd17 [Desulfobacterium autotrophicum HRM2] Length = 604 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/347 (23%), Positives = 154/347 (44%), Gaps = 58/347 (16%) Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M P +T + +V T + + K++S E+ T + LTE G Sbjct: 125 MMYPGLTHGAGKLVEEFGTDEQKRVFLKKMYSGEWAGT-------------MLLTEPGAG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFL 257 +D+ A+T+ ++ DG + ++G K F+S +++ I +LA++EG + FL Sbjct: 172 SDVGALTTTAKRNDDGTFSITGEKIFISGGEHDLTENIIHPVLARIEGAPEGTKGISLFL 231 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 VP+ L EDGS N + +++K+G N+T L + G LLG+ N + Sbjct: 232 VPKFLVNEDGSLGEFNDVVCTGIEHKLGIHGNSTCSLALGSNGKCVGTLLGEENKG---M 288 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGIL------------IDQPV 354 + M +++ ++ G + A A++YA++R +L I P Sbjct: 289 KAMFVMMNEARLLVGFQGFACATASYMYAVNYAKQRIQGKNLLEMMDANAKAVPIIQHPD 348 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAY---ARIMAPITKYWCCKMA 408 ++R + + + ++ + + D A K +E A Y ++ PI K + A Sbjct: 349 VRRQLLKMKALVEGMRSILYYVNYCADMAAIGKDEAERAKYQGLVEVLTPIAKGYVTDRA 408 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 V ++ M+ GG G+IEE +A+ R+ I G+ +D+L Sbjct: 409 FEVCSQGMQIYGGYGFIEEYPMAQLLRDCRITMIYEGTNGIQAMDLL 455 >gi|39934035|ref|NP_946311.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39647883|emb|CAE26402.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 593 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 101/457 (22%), Positives = 190/457 (41%), Gaps = 60/457 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114 G+Y TAQ L + + L G++ KV P W +R I G Sbjct: 29 FGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + F A ++ + + G + P +T +++ AL T + + + Sbjct: 89 WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDALKQ 146 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + K+ S E+ T MQ LTE + G+D+ A+ ++ ++ +DG Y + G K Sbjct: 147 VYLGKLISGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYRIFGSK 193 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275 F++ M+D + A +G + FLVP+ L + G+ N + + Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVNADGTLGARNDIYPSGV 252 Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 ++K+G ++ T + + G+L+G+ N + M L + V + Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312 Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAA------TALSFRLA 377 +A+ YA+ R I +I P +KR + + I AA TA++ +A Sbjct: 313 QQALAYAQERKQGRAIGSAGPGSDPIIKHPDVKRTLLTMRALIGAARTICYSTAVALDIA 372 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K ++ AA ++ PI K + + V + ++ GG G+IEE A+HYR++ Sbjct: 373 ARSTDPKVKASAAARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 I G+ +D++ + G N +F+ L++ Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGANGGASVFALLDE 468 >gi|213965498|ref|ZP_03393693.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46] gi|213951882|gb|EEB63269.1| long-chain specific acyl-CoA dehydrogenase [Corynebacterium amycolatum SK46] Length = 390 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 18/269 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 L +TE G+D+A + + +K D Y L+G K F+S+ M F ++A + +GR G Sbjct: 130 LAMTEPGAGSDLAGMRTFAKKDGDH-YVLNGTKIFISNGMMADFALVAAITDPSKGRAG- 187 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 V + D G K+G ++ T EL F N LLG+ + G + Sbjct: 188 --VSMFIVDADLEGFTKAGPLQKVGLKAQDTAELNFDNVRVPAENLLGEEGAAFGYLRTN 245 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A SV+ R + A YA+ R G +I V +ADIA + A A Sbjct: 246 LAHERLTLACGSVATSRRAWTLAYKYAQEREAFGRPIIQHQVHGHYLADIATRVTALQAF 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+A A + KYW + ++ ++ GG G++ E I+ Sbjct: 306 -------VDQAVMAHNAGQLDETGASMAKYWTTEEQQDIVTRCLQMFGGYGFMLEYPIST 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461 HY +S +I G+ M + + KG Sbjct: 359 HYLDSKVQTIYGGTNEIMKEIIFRRIAKG 387 >gi|308050792|ref|YP_003914358.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] gi|307632982|gb|ADN77284.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] Length = 596 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 147/351 (41%), Gaps = 70/351 (19%) Query: 152 MSPSVTSASMVALMTTPRVHKDWA------PKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 M P ++ + LM H D A PK+ S E+ T + LTE Sbjct: 125 MYPGLSHGAQATLM----AHGDEALQARFMPKLVSGEWTGT-------------MCLTEA 167 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254 G+D+ + ++ DG Y L G K F+SS D I++A++EG + Sbjct: 168 HCGSDLGLLRTKATPQEDGSYRLDGSKIFISSGDHDLAENIVHIVIARIEGAPAGTKGIS 227 Query: 255 CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 FLVP++ +DGS NG+ +++K+G NAT + F G+LLG+ N + Sbjct: 228 LFLVPKMAVADDGSITGRNGVSCGSIEHKMGIHGNATCVINFDGATGYLLGEPNRGLNAM 287 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------------ 353 + A V+ S A+ YAR R +SG D+P Sbjct: 288 FTFMNAARVGVAAEGVAAAEASFQGALAYARERLQMRSLSGIKAPDKPADPIIVHPDVRR 347 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWC 404 + ++AIA+ AL + +A+ D +KS R A ++ PI K + Sbjct: 348 MLLTQKAIAE------GGRALVYEMASWVDISKSSTVSSEARQRAEARLSLLTPIAKAFL 401 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +M + ++ +GG GY+ E + + R++ + + G+ LD+L Sbjct: 402 TEMGFEATSLGVQVLGGHGYVAEWGMEQLMRDTKISCLYEGTTGIQALDLL 452 >gi|213422064|ref|ZP_03355130.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 167 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W+ R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYD 184 AQ+EAG L ++T +A+ + L P DW + S YD Sbjct: 125 AQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPLRSDRYD 166 >gi|188591193|ref|YP_001795793.1| acyl-CoA dehydrogenase oxidoreductase [Cupriavidus taiwanensis LMG 19424] gi|170938087|emb|CAP63071.1| putative ACYL-COA DEHYDROGENASE OXIDOREDUCTASE [Cupriavidus taiwanensis LMG 19424] Length = 595 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 59/346 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP + + + PK+ S + T + LTE GT Sbjct: 127 MYPGLSHGAYEALHAHGTPELQQTYLPKLVSGVWTGT-------------MCLTEPHCGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + S+ + +DG Y ++G K F+S+ D ++LA++ + F+V Sbjct: 174 DLGILRSKAEPQADGSYRITGTKIFISAGEHDLAENIIHLVLARLPDAPAGTKGISLFVV 233 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + D G+P NG+ +++K+G NAT + G+++G+ N Sbjct: 234 PKFIPDASGNPGERNGIQCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLN-----A 288 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------------HVSGGILIDQPVMK 356 + + +++A + V + L E ++ YA+ R + +I P ++ Sbjct: 289 MFVMMNAARLGVGAQGLGLTEVAYQNSVAYAKDRLQMRSLTGPKAPEKAADPIIVHPDVR 348 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R + A S+ A D S +EA + ++ P+ K + A Sbjct: 349 RMLLTQRAYAEGGRAFSYWTALQIDRELSHPDEAVRKQAGDLVALLTPVIKAFLTDNAFT 408 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 409 STNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTIQALDLLG 454 >gi|190890257|ref|YP_001976799.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652] gi|190695536|gb|ACE89621.1| acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652] Length = 598 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 37/344 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206 H TSA+ ++LM P + + I ++E T M S + + LTE Sbjct: 110 HCAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGTMNLTEPH 169 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255 GTD+ + ++ +DG Y +SG K F+S+ D ++LA++EG + Sbjct: 170 CGTDLGMLRTKAVPQADGSYRISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISL 229 Query: 256 FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----DLNVST 306 F+VP+ L +DG+P N + +++K+G NAT + + GFL+G LN Sbjct: 230 FIVPKFLVGKDGAPGARNAVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRA 358 + + ++++ L +S + + A A + R +SG +I P ++R Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAAAYARDRIQGRSLSGVKAPDKKADPIIVHPDIRRT 349 Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + I A + A TAL +A+ + K R ++ PI K Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERRTADDILGLVTPILKGVMTDKGFDHA 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453 >gi|329888332|ref|ZP_08266930.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] gi|328846888|gb|EGF96450.1| acyl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] Length = 375 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 32/301 (10%) Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219 L T VH RE + KA P IG LTE G+D AA+T++ Sbjct: 81 LSTVVSVHNAPVVAALVREGTESQKATFLPSLCGGEMIGAFALTESGAGSDAAALTTRAI 140 Query: 220 KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQ 273 + G + ++G K F++S + ++ V G+ G FLVP GL Sbjct: 141 Q-EGGDWRINGAKQFITSGRTAGLTIIFAVTNPVLGKKGLTAFLVPS-----GAKGLLVD 194 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332 ++++K+G ++ T L+F + +L D G E +I L L++ + ++ V + Sbjct: 195 KVEHKMGQHASDTCALKFED---LILNDGLRLGGEGEGYRIALANLETGRIGIAAQSVGM 251 Query: 333 AE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 A+ A+ YAR R G ++D + +AD+A + AA L A++ D + Sbjct: 252 AQSALEVAVKYARERVAFGKPIMDHQAVGFRLADLAARLEAARQLVLHAASTKDAGRPCL 311 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 +EA+ A+++A T A AV + A++ +GG GY+EE +A+ YR+ I G+ Sbjct: 312 KEASMAKLIASET-------AEAVCSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTS 364 Query: 448 N 448 + Sbjct: 365 D 365 >gi|209886008|ref|YP_002289865.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5] gi|209874204|gb|ACI94000.1| acyl-CoA dehydrogenase [Oligotropha carboxidovorans OM5] Length = 597 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + G+D+ A+ + + +DG Y LSG K F++ D ++LA++ G Sbjct: 163 LTEPQAGSDVGALRTHAETQADGSYRLSGTKIFITYGDHDMTENIVHLVLARLPGAPEGT 222 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 + F+VP+ L + G+ N + L++K+G + T + + G+LLG+ Sbjct: 223 KGISLFVVPKFLVNADGSLGARNDIYASGLEHKLGIHGSPTCTMTMGDHGGAVGYLLGEE 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQP 353 N + M L + V ++ +AI YAR R I +I P Sbjct: 283 NNGMACMFTMMNQARLGVGLEGVGIAERAMQQAIAYARERRQGRAIGKKDGGPDPIIVHP 342 Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 +KR A+ A I ATA++ +A + R++ +A A ++ P+ K + + Sbjct: 343 DVKRNLVTMRALTAAARTICYATAVAIDVARESTDENIRTKASARAGLLTPLAKAFSTDI 402 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A A ++ GG+G+IEE A++ R++ +I G+ D++ Sbjct: 403 ANDAAALGVQVHGGAGFIEETGAAQYIRDARILTIYEGTNGIQANDLV 450 >gi|254702972|ref|ZP_05164800.1| hypothetical protein Bsuib36_03344 [Brucella suis bv. 3 str. 686] Length = 110 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 64/107 (59%) Query: 453 DVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 DV +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LTE++A A+ Sbjct: 1 DVARVLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLTEQLAFAA 60 Query: 513 SAAALYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 +AA L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 61 AAAELRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 107 >gi|108762147|ref|YP_631178.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108466027|gb|ABF91212.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 379 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 13/304 (4%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +S S+ + +AL+ ++ +I + E P K LG++E G+D+ Sbjct: 76 LSRSLNAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEKIAALGVSEPGCGSDV 135 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271 A+I + ++ D Y ++G K ++++ FI LA G G + + G Sbjct: 136 ASIKTTARRDGDD-YVINGSKMWITNGTRADFITLAVRTGEAGYGGISLVTFPTDVKGFG 194 Query: 272 YQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 + +K+GN S+ T L F + ++LG+ N + L AI +V+GM Sbjct: 195 VSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQGERLVGAITTVAGM 254 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + ++I Y R G L+ V + + I AA L++ + FD ++ + Sbjct: 255 ERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDRKENPVK 314 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 E + A++ A +A V + + GG GY+EE SIAR +R+ I +G G Sbjct: 315 EVSMAKLFA-------GDLAQRVAYDCQQFYGGMGYVEETSIARMWRD--VRLITIGGGT 365 Query: 449 AMVL 452 + V+ Sbjct: 366 SEVM 369 >gi|83859545|ref|ZP_00953065.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851904|gb|EAP89758.1| acyl-CoA dehydrogenase family protein [Oceanicaulis alexandrii HTCC2633] Length = 593 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 61/346 (17%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + AL+ + + PK+FS E+ T + LTE GT Sbjct: 125 MYPGLTNGAAQALLVGGSQEQKELYLPKMFSGEWSGT-------------MNLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ DG Y +SG K ++S+ MS + +LA+VEG + F+V Sbjct: 172 DLGMLRTKAVPQGDGTYKISGQKIWISAGEHEMSGNIVHLVLARVEGAPQGVKGISLFVV 231 Query: 259 PRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L D G+P N L L+ K+G NAT + + G+L+G+ N + +K Sbjct: 232 PKYLPDADGNPGERNSLKCGGLEEKMGIHGNATCVMNYDEATGWLVGEEN------KGLK 285 Query: 314 ILIYL----------DSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVM 355 I+ + ++ + + SLA A + R ++G +I P + Sbjct: 286 IMFVMMNEARLGVGLQGLGLAETAYQYSLAFAKDRIQGRSLTGPKNPDGPADPIIVHPDV 345 Query: 356 KRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R + D + + A TAL L + ++ R + + ++ PI K + Sbjct: 346 RRMLMDQKVFVEGARAFTYWTALQGDLEHKAEDEAVREKAGDFMALLTPIVKGYLTDKGY 405 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ ++ GGSG+ E I + R++ I G+ LD++ Sbjct: 406 ESVSTGLQVHGGSGFTREWGIEQLLRDARITLIYEGTNGVQALDLV 451 >gi|126730544|ref|ZP_01746355.1| acyl-CoA dehydrogenase [Sagittula stellata E-37] gi|126709277|gb|EBA08332.1| acyl-CoA dehydrogenase [Sagittula stellata E-37] Length = 532 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 78/326 (23%), Positives = 137/326 (42%), Gaps = 34/326 (10%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P + +W PK+ S E+ T + ++E G+D+ I ++ DG + Sbjct: 134 PDLAAEWCPKLASGEWAAT-------------ICISEPDAGSDVGRIRTKAMPAGDG-WT 179 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCYQRLK 276 +SG K ++S D + LA+ +G G FLV L+DG+ NG+ +R++ Sbjct: 180 VSGTKCWISFGDHDMAERIGHLCLARTGAPEDGTRGLSLFLVADTLDDGTRNGIFVERIE 239 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 K+G + T L F L+G + +M L+ L + A Sbjct: 240 EKLGLHGSPTCVLRFETAEASLIGTPGRGLPALFNMIELMRLQVGVQGAGVAATCATLAR 299 Query: 337 HYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEE 389 YA R G + P ++R + + ATAL A + +A + +E Sbjct: 300 DYADDRRQGGRPDAAPVAIASHPDVRRQLWQMEARALIATALVVETAVTLGDAHAGNTEA 359 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA + + P+ K + ++ A A++ +GG+GY E RH+R+ ++ G+ Sbjct: 360 AALSAFLLPLAKTFGGELGQANADAAIQVLGGAGYTREWPAERHFRDVRITTVYEGTTGM 419 Query: 450 MVLDVL--NLLEKGTNLFEQLFSTLE 473 DVL LL+ G + L + L+ Sbjct: 420 QAQDVLFRRLLKDGPAIRAALLARLD 445 >gi|153004046|ref|YP_001378371.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027619|gb|ABS25387.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 381 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 11/265 (4%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP + L ++E G+D+AAI + ++ D + W + +D F+ +A Sbjct: 115 APAIRGEKVAALAISEPDAGSDVAAIRTTARRDGDALVVNGAKMWITNGARAD-FLTMAV 173 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 G G + LL G R K+GN S+ T L F + +LLG+ N Sbjct: 174 RTGGEGHEGISLLLFPTDTPGFQVSRTLEKVGNPSSDTALLFFEDCRVPARWLLGEENQG 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 V L +A+ +V+GM++ + +A+ YA R G L V + +A+ Sbjct: 234 FYHVMANFQGERLVAAVQAVAGMQLMVEDAMRYAGERSAFGRPLARMQVWRHKLAEHLTA 293 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L++R + + +E + A++ A C++A V + M+ GG GY+ Sbjct: 294 IEAARWLTYRACDLLQRGEPAVKEISMAKLFA-------CELAQRVAYDCMQLHGGMGYV 346 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E +AR +R+ +I G+ M Sbjct: 347 LETDVARAWRDVRVMTIAGGTSEIM 371 >gi|68536548|ref|YP_251253.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411] gi|260577688|ref|ZP_05845623.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734] gi|68264147|emb|CAI37635.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium K411] gi|258604083|gb|EEW17325.1| acyl-CoA dehydrogenase [Corynebacterium jeikeium ATCC 43734] Length = 391 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 17/271 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 L +TE G D+A I + +K +G Y ++G K F+S+ + F +L V +GR G Sbjct: 131 LAMTEPGAGADLAGIRTFAKKDENGDYIVNGAKTFISNGVQADFTLLVVVTNPEKGRAGV 190 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 ++ ++EDG LK K+G +S T EL F +T LLG+ + G + Sbjct: 191 SML--IVEDGMEGYTKTGPLK-KVGLKSQDTAELSFEDTRVPKENLLGEEGAAFGYLRTN 247 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ S++ R + +++ R G LID + +A +A +I + Sbjct: 248 LAQERLSIAVGSIATSRRAFDLVYKHSQDRKTFGQRLIDHQAYRWELAKMATNIQGSQ-- 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 SF A ++ +E + + KY ++ V+ EA++ GG G++ E I+ Sbjct: 306 SFVDACIMEKVNGTLDE-----VTGAMAKYQTTELQIEVVNEALQLHGGYGFMLEYPIST 360 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 HY +S I G M+ + L KG N Sbjct: 361 HYLDSRVQPIYGGPNEIMIEIISRRLAKGEN 391 >gi|297616645|ref|YP_003701804.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144482|gb|ADI01239.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 608 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 54/339 (15%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A ++ + + + + PK++S ++ T + LTE + G+D+ T++ Sbjct: 134 AAGLIRDFGSEELKRIYLPKMYSGQWAGT-------------MVLTEPQAGSDVGDATTR 180 Query: 218 GQKISD-GIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLE-- 263 + G+Y + G K F+S D ++LA++EG + F+VP+ L Sbjct: 181 AIPTDEPGVYLIKGTKCFISGGEQDVTENIVHLVLARIEGAASGTRGLSLFVVPKYLPNA 240 Query: 264 DGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIY 317 DG+P N + +++K+G+R + T L F GFLLGD G + M + Sbjct: 241 DGNPGEWNDITCVGIEHKLGHRGSPTCVLNFGEEGKCKGFLLGDPPGEDGSGQGMAQMFR 300 Query: 318 LDSAIMSVSGMR-VSLA-----EAIHYARRR---------HVSGGILIDQPVMKRAIADI 362 + + +SG+ +LA A+ Y + R +I +KR + Sbjct: 301 MMNEERLMSGLSGCALAASAYHNAVKYCQERIQGRAATNPKAGRCAIIKHEDVKRMLMFQ 360 Query: 363 ALDIAAATALSFRLANSFDEAKSRS------EEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + A A++ + D K S + + + PI K +C +A I+EA+ Sbjct: 361 KAHVEAFRAMAIQTYYWVDIEKYSSDPDLVQQAKVFLEVNTPIVKAYCSDVALQCISEAL 420 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +C GG G+ EE IA YR++ I G+ LD++ Sbjct: 421 QCYGGYGFSEEYPIAEIYRDARIYPIWEGTNYIQALDLV 459 >gi|264680266|ref|YP_003280176.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262210782|gb|ACY34880.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 535 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%) Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252 LTE G+D+ + +Q G+ + +SG K F+S D ++LA++ G Sbjct: 112 LTEAHAGSDLGQVRTQAVPVGESEQGERFEISGSKIFISGGEHDLTDNIVHLVLARLPGA 171 Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + FLVP+LL G N + +R++ K+G + T + F G+L+G Sbjct: 172 PAGPKGLSLFLVPKLLPGGERNRVVCERIEEKMGLHGSPTCVMRFDGAAGWLIGQPGAGL 231 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351 + M L A+ + + + +A YA RR+ + G ++I+ Sbjct: 232 NAMFVMMNAARLHVALQGIGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIE 291 Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++RA D +A T + +A + A+ R + + ++ P+ K Sbjct: 292 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPVLKAAWT 351 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 + A + ++ GG GYI E I + R+S I G+ +D+L +L G Sbjct: 352 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 411 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501 Q TL L + +LR L CKED LA Sbjct: 412 AMGQWLLTLRNSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 459 >gi|254471938|ref|ZP_05085339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062] gi|211959140|gb|EEA94339.1| acyl-CoA dehydrogenase family protein [Pseudovibrio sp. JE062] Length = 598 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ +M AL+ + + PK+ + E+ T + LTE GT Sbjct: 126 MYPGLTAGAMAALLVHANDEIKNTYLPKMVTGEWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y +SG K F+S+ D ++LA++EG + F+V Sbjct: 173 DLGMLRTKAAPQGDGSYKISGTKIFISAGDQDLSENIVHLVLARIEGAPEGTKGISLFVV 232 Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P +L DG+P NG+ ++ K+G NAT + + + G+L+G+ N + M Sbjct: 233 PKKKLDADGNPGEMNGVSVGSIEEKMGIHGNATCVMNYDESVGYLVGEENKGLRAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L I ++ V+ A+ YA+ R +I P ++R + Sbjct: 293 NEARLGVGIQGLAQSEVAYQNAVTYAKDRIQGRSLTGPKNPEKQADPIIVHPDVRRVLMT 352 Query: 362 IALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMA---PITKYWCCKMAPAVIAEA 415 I AA AL + D ++ +E+ A IM P+ K A Sbjct: 353 IRSFNEAARALYMWTSLHGDVSHLSQDDAEKQASDDIMGLLTPVVKGVLTDKGFDNTVMA 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYI+E + + R++ I G+ LD++ Sbjct: 413 QQLYGGHGYIQEWGMEQFVRDARIAMIYEGANGVQALDLV 452 >gi|118467998|ref|YP_888269.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118169285|gb|ABK70181.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 377 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 44/341 (12%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK--IFSREYDPTNKAPMQKTSV-AI 198 L AQ A +S + S +MV L+ +WA + + D K + S A+ Sbjct: 62 LAAQAIAVEELSAACASTAMVLLV-------NWAGTCTVIHQGSDELKKLVVPDVSTGAV 114 Query: 199 GLG--LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGR 252 G G LTE GG+D++ I ++ Q+ DG + L+G K F+S + D F +LA+ E Sbjct: 115 GAGWCLTEPTGGSDLSGIRTKAQR--DGSDWVLNGQKRFISNADWGDWFAVLARSGEENE 172 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE--LEFSNTFG-FLLGDLNVSTGPV 309 G F+V + S GL + + K+G R + T + LE G ++GD P Sbjct: 173 FGVFMVHK-----SDAGLSFGPPEKKMGLRGSPTADVILEDCRIPGERVVGD------PT 221 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 + K +I L+ + ++ + LA+ AI Y R G L +++ +AD A Sbjct: 222 QGYKYIIDELNGSRALIAAQALGLAKGALRTAIEYTAERRQFGSALSTFQMVRAMVADAA 281 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + + +A+AL ++ ++ + R AR + + K C A AV +A++ +GG G Sbjct: 282 IRVESASALLYKAVDAIENKDPR------ARSLVSMAKVLCSDNAMAVTTDAVQLLGGYG 335 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + E + R R++ I GS L + L KG L Sbjct: 336 FTREYPVERMMRDAKVTQIYEGSNQIQRLVISKGLYKGEAL 376 >gi|312898450|ref|ZP_07757840.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359] gi|310620369|gb|EFQ03939.1| putative acyl-CoA dehydrogenase [Megasphaera micronuciformis F0359] Length = 379 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 36/274 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-F 256 LTE G+D ++++Q K DG Y L+G K F+++ +++ F++ A G Sbjct: 121 FALTEPGTGSDAGSVSTQATKTEDGKGYILNGTKCFITNGALAEVFVVFANTRKGGGVRG 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED----- 311 L +++ G+P G + +NK+G R++ T EL F + F P+ED Sbjct: 181 LTAFIVKKGTP-GFSVGKAENKMGIRASNTTELIFQDCFV-----------PMEDRLGRE 228 Query: 312 ---MKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362 +I + LD+A V + V +AEA A + + D+P+ ++ IAD+ Sbjct: 229 GQGFRIAMNTLDAARPFVGAVSVGIAEAAFRACTEYAKVRVQFDKPIASFQMVQAMIADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A+ + A L R D+ S EAA A+ A +A V +A++ +GG Sbjct: 289 AMKVEGARLLVQRACWMKDQGMDFSREAAIAKCNAS-------DVAMQVTTDAVQVMGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GYI+E + ++ R++ I G+ L + N Sbjct: 342 GYIKEYPVEKYMRDAKIMQIYEGTNQIQRLVIAN 375 >gi|300814959|ref|ZP_07095187.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510929|gb|EFK38201.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 642 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T ++ Y L+G K F++ +P +D +++ A Sbjct: 112 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAV 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + +K+G RS++T EL F+ + N+ Sbjct: 171 TTPGIGTHGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELTFNKV---KVPKENLLGQE 227 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + +I + LD + ++ + +A+ A+ YA+ R G + Q + IAD+ Sbjct: 228 GQGFRIAMQTLDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADM 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I AA L + A + S EAA A+ A T +C EA++ GGS Sbjct: 288 ATKIRAARLLIYSAAEMKTNHEKYSMEAAMAKTYASETALFCAN-------EALQIHGGS 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GY++ + R YR++ +I G+ + V N Sbjct: 341 GYMKGMEVERFYRDAKITTIYEGTSEVQRVVVAN 374 >gi|146278496|ref|YP_001168655.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145556737|gb|ABP71350.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 562 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 46/320 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + + DG + ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLPDGTHAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279 + +D ++LA++ + FLVP+ L D G+P N + L+ K+ Sbjct: 197 TWGDTDFNANVCHLVLARLPDAEPGTRGISLFLVPKFLPDADGNPGPRNAVSVVSLEEKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHY 338 G + T ++++ G+L+G P + M + +++A + V V +AEA Sbjct: 257 GLHGSPTAVMDYAEAKGWLVG------APHKGMAAMFTMMNNARLGVGAQGVGVAEAATQ 310 Query: 339 A------RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEA 390 A RR G +I ++R +A + + +A A++ A + D A +SE Sbjct: 311 AAVAYAMERRQGGQGTIIGHADVRRMLAVMRAETFSARAIALACAVAIDMGRATGQSEWQ 370 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A A ++ PI K + + V + ++ GG+G+IE A+ R+ +I G+ Sbjct: 371 ARAALLTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQ 430 Query: 451 VLDVLN--LLEKGTNLFEQL 468 +D++ +++ G F L Sbjct: 431 AMDLVGRKMMDGGEAAFRLL 450 >gi|71907187|ref|YP_284774.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] gi|71846808|gb|AAZ46304.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Dechloromonas aromatica RCB] Length = 597 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 92/377 (24%), Positives = 174/377 (46%), Gaps = 67/377 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T+ + AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 125 IGPLLTTGATEALLTCASDELKSIYLEKMVTGEWTGT-------------MNLTEPQAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A I S+ + +DG Y + G K F+S M+D + L A V+G + FL Sbjct: 172 DLALIRSRAEPQADGSYRVFGQKIFISYGDHDMTDNIVHLVLARLPDAPAGVKG-ISMFL 230 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 VP+ + + G+ N +++K+G ++ T + + + G+LLG+ N + Sbjct: 231 VPKFMVNADGSLGARNDAHCVSIEHKLGIHASPTCVMAYGDNGGAVGYLLGEANRG---L 287 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGILI---DQPVMK 356 E M I ++ A + V V+L E A+ YAR R ++G L+ P ++ Sbjct: 288 EYM--FIMMNEARLGVGLQGVALGERAYQHALAYARERKQGRDALTGEALVTLDKHPDIR 345 Query: 357 RAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R + + + A+ A ++ A+ D + + + A + PI K +M Sbjct: 346 RMLMLMKTRVEASRAATYYTASLLDRVHAINDPEEKKRNLYLAEFLIPIVKGGGTEMGIE 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN---L 464 V + ++ GG G+IEE A+H+R+S +I G+ D+L + ++G + Sbjct: 406 VTSLGIQIHGGMGFIEETGAAQHWRDSRITTIYEGTTGIQANDLLFRKLMRDQGATAKVV 465 Query: 465 FEQLFSTLEQDLGSSGK 481 F ++++T + LG+SGK Sbjct: 466 FGEVYAT-AKTLGASGK 481 >gi|330505312|ref|YP_004382181.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328919598|gb|AEB60429.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 592 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 36/314 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+++ + G N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKVMVNADGSLGEKNALGCGSIEHKMGIKASATCVMNFDGATGYLIGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I +S S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLSLGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++A R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDKATAKRADELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 A + GG G+I E + R+ I G+ LD++ ++ G + + Sbjct: 406 ALETTVHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQSLDLVGRKIVGSGGSYY 465 Query: 466 EQLFSTLEQDLGSS 479 + ++ +GS+ Sbjct: 466 KHFADEIKAFVGSA 479 >gi|296284062|ref|ZP_06862060.1| putative acyl-CoA dehydrogenase protein [Citromicrobium bathyomarinum JL354] Length = 601 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/366 (23%), Positives = 155/366 (42%), Gaps = 51/366 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ ++ AL+ + + + PK+ S E+ T + LTE GT Sbjct: 126 MYPGLTNGAISALIAKGSQEQKEKYLPKMVSCEWTGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ I ++ + +DG Y ++G K F+S+ D ++LA+ G + F+V Sbjct: 173 DLGLIRTKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLAKTPGAPDSSKGISLFVV 232 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L +DGS NG+ +++K+G N+T + + + G+++G+ N + M Sbjct: 233 PKFLVNDDGSVGDRNGVMCGSIEHKMGIHGNSTCVMNYDDAKGWMVGEENKGLAAMFIMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGILIDQ--------PVMKRAIAD 361 L I +S VS A+ YA RR R ++G D+ P ++R + D Sbjct: 293 NAARLGVGIQGLSQAEVSYQNAVTYALDRRQGRALTGPAEPDEKADPIFVHPDVRRMLMD 352 Query: 362 IAL------DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 A TAL L+++ + R +M P+ K + V Sbjct: 353 AKAFNEGMRAFALWTALQQDLSHALQDEDERQLADDLVGLMTPVIKGYGTDKGYDVANNM 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 + GG GYI E + + R++ I G+ +D+ L G + F ++ Sbjct: 413 QQVYGGHGYIAEWGMEQFVRDARIAMIYEGTNGIQAMDLAGRKLAMHGGRAVQAFFKLVD 472 Query: 474 QDLGSS 479 ++ S+ Sbjct: 473 DEVASA 478 >gi|15898849|ref|NP_343454.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2] gi|284173359|ref|ZP_06387328.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus 98/2] gi|13815346|gb|AAK42244.1| Acyl-CoA dehydrogenase (acd-3) [Sulfolobus solfataricus P2] gi|261603260|gb|ACX92863.1| acyl-CoA dehydrogenase domain protein [Sulfolobus solfataricus 98/2] Length = 371 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 33/261 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K + LTE GG+DI ++ + +K +G + + GHK W +D FI +A+ Sbjct: 102 PLSKGEIIGSFALTEPSGGSDIGSMKTLAEK-RNGSWIIKGHKMWITQGLYADVFITVAK 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR C + K ++ GNR T E+ F N + +++G+ Sbjct: 161 TGSSRRDLSVFIVPR--------SNCVETRKIEVMGNRGTGTAEVIFHNCEVSNDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LA EA +A+ R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEAFKWAKSRFAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 AD + A +++ +++ FDE + ++ Y ++ K +A VI ++ Sbjct: 268 WYFADAIAKLNAVKSMAKDVSSKFDE--NSKDKGVYVSML----KLLSANIANEVIDISL 321 Query: 417 ECIGGSGYIEERSIARHYRES 437 + GG GY + +I R YR++ Sbjct: 322 QVFGGMGYAKGTNIERIYRDA 342 >gi|89070202|ref|ZP_01157530.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516] gi|89044218|gb|EAR50369.1| probable acyl-CoA dehydrogenase [Oceanicola granulosus HTCC2516] Length = 563 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/333 (21%), Positives = 149/333 (44%), Gaps = 37/333 (11%) Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 L+ G LMS A ++ P + + P++ S E+ T + LTE Sbjct: 122 LQLGPLMSQGAIEA--LSHHAAPELQALYLPRLVSGEWCGT-------------MNLTEP 166 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254 + G+D+ A+ ++ + DG Y ++G K +++ +D ++LA++ + Sbjct: 167 QAGSDVGALRTRAEPADDGTYRITGEKIYITWADNDFTENVCHLVLARLPDAAPGSKGIS 226 Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 FLVP+ L D G+ N L L++K+G + T + + +L+G + + Sbjct: 227 LFLVPKRLPDADGRPGAANALRVVSLEHKLGLHGSPTAVMAYEGATSWLVGPPHGGLAAM 286 Query: 310 EDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M ++ + L ++ + ++++L A + R G +I+ ++R +A + + Sbjct: 287 FTMMNNARLGVGLQGIGVAEAALQLALGHASERRQGRAGGEGTIIEHADVRRMLAQMKAE 346 Query: 366 IAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA A++ A + D A E +A A ++ P+ K + V + ++ GG G Sbjct: 347 TFAARAIALDCARAIDMETATGAPEWSARAALLTPVAKAFGTDTGFDVASTGVQVHGGMG 406 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +IEE A++ R+ SI G+ +D++ Sbjct: 407 FIEETGAAQYLRDVRVTSIYEGTNGIQAMDLVG 439 >gi|163849086|ref|YP_001637130.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222527059|ref|YP_002571530.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670375|gb|ABY36741.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450938|gb|ACM55204.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl] Length = 394 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 16/238 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258 LTE G+D A I + +++S G Y L+G K W ++ +D ++ AQ E GR+G FLV Sbjct: 137 LTEPYVGSDAAHIRTTAKRVSGG-YLLNGAKRWIGNATFADVIVVWAQDEETGRIGGFLV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316 E G+P G +++ KI RS ++ N F L ++ + IL Sbjct: 196 ----EKGTP-GYRATKIEGKIAKRSVINADITLENVFVPEENRLPLARSFRDTANILKNT 250 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 A +V + + A+ Y +R G + ++++ + + D+ A +++RL Sbjct: 251 RYGVAWEAVGHAQAAYELALEYTLQREQFGRPIAGFQLVQQKLVHMLGDLTAIQLMAWRL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + DE +S+ E MA + K +C A ++A E +GG+G + +R IARH+ Sbjct: 311 SKLRDEDESQITEG-----MASLAKQYCAAKARQIVALGREVLGGNGILLDRHIARHF 363 >gi|329888447|ref|ZP_08267045.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] gi|328847003|gb|EGF96565.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] Length = 593 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 60/346 (17%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +TS + + + + + + PK+ S E+ T + LTE + GT Sbjct: 124 MYPGLTSGAFHGIEASASDEIKQKYLPKMASGEWTGT-------------MNLTEPQCGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGRV------GCFLV 258 D+ + ++ K DG Y ++G K ++S+ +D I +LA+VEG V F+V Sbjct: 171 DLGMVRTKAVKNDDGSYSITGQKIWISAGEHDFADNIIHTVLARVEGAVPGIKGLSLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L EDGS NG+ L++K+G NAT + + N G+L+G+ Sbjct: 231 PKFLVNEDGSLGERNGVSCAGLEHKMGIHGNATCVMAYENAKGWLIGEEGRGMN-----N 285 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQPV--------MK 356 + + ++ A + +++ +A + A + R ++G D P ++ Sbjct: 286 MFVVMNEARLGTGLQGLAIGDAAYQAAVEFANDRLQGRSLTGPKNPDGPADPIMVHPDVR 345 Query: 357 RAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R + + + TAL L + DEA + ++ Y ++ P+ K + Sbjct: 346 RMLLEAKAFVEGGRAFILWTALQADLQKAADEAVA-TKAKDYMGLITPVLKAYLTDKGFH 404 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 V + AM+ GGSGY E +++ R++ I G+ LD++ Sbjct: 405 VASLAMQVHGGSGYTEHFPASQYLRDARITMIYEGTNGIQALDLVG 450 >gi|322819443|gb|EFZ26564.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi] Length = 411 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 43/275 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ + E+ IG + ++E GTD+ +++ +K+ D Y L+G K Sbjct: 144 WLPKVLTGEH--------------IGAMCMSEPGAGTDVLGMSTAAKKLGDEKYVLNGCK 189 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + ++D ++ A+V+G++ F+V E G+P C ++ +K G RS+ +L F Sbjct: 190 TWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGTKI-DKCGMRSSQMCQLFF 244 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAE-----AIHYARRR 342 N +L+ + E+ K ++ L+ +++S M + +A+ YA R Sbjct: 245 DNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRCVELMTRYASER 298 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + ++R IA+ + AA AL++ ++ S + R+ + K Sbjct: 299 QAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-------RLGSDAAKL 351 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +A V M+ +GG GY E + R +R++ Sbjct: 352 FAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDA 386 >gi|91788978|ref|YP_549930.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91698203|gb|ABE45032.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 575 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 34/305 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ DG + LSG K F+S D ++LA++ G Sbjct: 164 LTEPHAGSDLGLVRTKAMPQPDGSFLLSGTKIFISGGEHDLTDNIVHLVLARLHGPGIEA 223 Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + FLVP+ + DG+ + + +R++ K+G + T + F + G+++G+ Sbjct: 224 PPGPKGLSLFLVPKFMPDGTRSPVHCERIEEKMGLHGSPTCVMRFDDATGWIVGEPGRGL 283 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSG--------GILIDQPVM 355 + M L A+ + + + +A YAR R V G ++ P + Sbjct: 284 SAMFVMMNAARLHVALQGIGLLDAAWQKADAYARERRQMRVPGQRNSAEAADLIAGHPAI 343 Query: 356 KR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R A D +A T + +A +A R + ++ P+ K A Sbjct: 344 RRILDTQRAWIDGGRLLAYKTGIELDIARHHPDAARRGSAQRWCSLVTPVLKAALTSQAF 403 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQ 467 ++ ++ GG GY++E I + R+S I G+ +D+L +L G + Sbjct: 404 HGASDCLQVFGGHGYVKEWGIEQIVRDSRVTMIYEGTNEVQAIDLLVRKVLPDGGSALAA 463 Query: 468 LFSTL 472 L L Sbjct: 464 LLDEL 468 >gi|114770393|ref|ZP_01447931.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255] gi|114549230|gb|EAU52113.1| acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255] Length = 592 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 97/442 (21%), Positives = 189/442 (42%), Gaps = 83/442 (18%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P+ + + PK+ + T + LTE GTD+ ++ S D Y Sbjct: 142 PQQKQTYLPKLIDGSWTGT-------------MNLTEPHAGTDLGSLKSTALSEGDH-YR 187 Query: 228 LSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271 + G K +++ MS+ I +LA++EG + F+VP+ L + G N + Sbjct: 188 IKGQKIYITYGEHDMSENIIHLVLARIEGAPAGIKGISLFIVPKFLVNSDGTLGVKNDVK 247 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMS 324 +++K+G + T L+F GFL+G L++ + D + + L +S Sbjct: 248 CLSIEHKLGINGSPTTVLQFGENEGAIGFLVGQENQGLSIMFAMMNDARFAVGLQG--LS 305 Query: 325 VSGMRVSLAEAIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 +S + +A YA R G + P + R +A + +I A ++ A Sbjct: 306 ISNR--AFHQAKSYAAERIQGIPLERKEGDTIHHHPDVMRLLASMRSEIEAMRGITIYTA 363 Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + D AK+ + + + +M PI K W + + ++ ++ ++ GG G+IEE A+H Sbjct: 364 AAIDLAKTNLDNNGFWSSRSELMIPIMKGWLTERSISITSDGIQVHGGMGFIEETGAAQH 423 Query: 434 YRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQ---------DLGSSGK 481 YR++ +I G+ D+L+ L ++ N+ E + ++ L S K Sbjct: 424 YRDARILTIYEGTTAIQANDLLHRKILRDEAANILELINEIIKDAESVNQSYASLNFSSK 483 Query: 482 KVITI---LRDSISLCKEDKGLARFLTE---------------KIALASSAAALYRAGMN 523 K++ +++ I ++K L R L+ + L S+ AA + + Sbjct: 484 KLLEATYSVKECIQYILDNKELLRELSAISVPLLMMMGTLCGGWMTLRSADAAFKQKNSS 543 Query: 524 DIADVFLENRFLDN-CHSTHCM 544 + + FLE + N +++HC+ Sbjct: 544 NWNNDFLEAKLTYNRIYTSHCL 565 >gi|311696587|gb|ADP99460.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 689 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 AP+ + A + LTE + GTD+ + ++ + +DG Y L+G K F+SS D Sbjct: 235 APLTEGRWAGTMCLTEPQCGTDLGQVKTKAEPQADGSYRLTGTKIFISSGDHDLTENIVH 294 Query: 244 IMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 I+LA++ +G G F+VP+ L D G NG+ L+ K+G +++AT L F Sbjct: 295 IVLARLPDAPKGTRGISLFIVPKFLPDSNGDVGERNGVVCGSLEKKMGIKASATCVLNFD 354 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGI 348 GFL+G N + + +AI V +S A+ YA+ R +SG Sbjct: 355 GATGFLIGPENDGLNCMFTFMNTARIGTAIQGVGPAELSYQWALAYAKDRRSMRALSGKK 414 Query: 349 LIDQ---------PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR--- 394 DQ V + + A+ L + RLA+ E + +E + Sbjct: 415 EPDQVADSLIHHADVRRMLLTQKAIAEGGRAMLYYAARLADHMVEGFTEGDEKKADKYDD 474 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + PI K + ++ ++ GG GYI E + + R++ ++ G+ Sbjct: 475 KLGFLTPILKGFLTELGCEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLYEGTTGIQA 534 Query: 452 LDVLN 456 LD+L Sbjct: 535 LDLLG 539 >gi|300704734|ref|YP_003746337.1| butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum CFBP2957] gi|299072398|emb|CBJ43743.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum CFBP2957] Length = 594 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ M+D + +LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNDNGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + A +A A + + +E +R + A + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAEEDAARKQNEALYEFLVPVVKGWSTEMSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|56420132|ref|YP_147450.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|56379974|dbj|BAD75882.1| CoA dehydrogenase [Geobacillus kaustophilus HTA426] Length = 380 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYARQVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V G+ G ++ L+ G + +K+G R++ T EL F N + NV Sbjct: 171 VTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P + K +Y LD +S++ + V +A+A + YA+ R G + ++ +A Sbjct: 228 DPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++I A + ++ A D+ K ++EA++A++ A + C +A++ G Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GY++E + RH R+ Sbjct: 341 GYGYMKEYGVERHLRD 356 >gi|291513773|emb|CBK62983.1| Acyl-CoA dehydrogenases [Alistipes shahii WAL 8301] Length = 555 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 29/335 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSS 237 F+ E P + LTE G+D+ A+ + + + L+G K F+++ Sbjct: 133 FASEEIKQKYLPWVSAGATCAMDLTEPDAGSDLGAVMLKATWSEERQTWLLNGVKRFITN 192 Query: 238 PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 + ++LA+ E G + L+ D G+ +R++NK+G + + T EL F+N Sbjct: 193 GDGEVSLVLARTEEGTTDARGLSMLVYDKRDGGVKVRRIENKLGIKGSPTCELVFTNAPA 252 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351 L+GD + G ++ ++ +++A + + V L EA + YA R G +I Sbjct: 253 QLVGDRKM--GLIK--YVMSLMNAARLGIGAQSVGLCEAAYREGLKYAHEREQFGKPIIQ 308 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI-- 395 + ++++ + AL + A + EA+ R E Y R+ Sbjct: 309 FAAVSEMLSNMKAKVQGVRALLYETARFVEVYKQYGHISHERSLEAEERQEMKFYNRLAD 368 Query: 396 -MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 P+ K + + A + +A++ GGSG++++ R YR++ +I G+ V+ Sbjct: 369 GFTPLVKLFSSEYANQLAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAA 428 Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 +N + KGT EQ+ + + V+T L++ Sbjct: 429 INAVTKGT-FLEQIGRYAAESYTEAMCPVVTKLKE 462 >gi|238021517|ref|ZP_04601943.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147] gi|237868497|gb|EEP69503.1| hypothetical protein GCWU000324_01417 [Kingella oralis ATCC 51147] Length = 595 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 48/335 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + L+E G+D+A + +Q +G Y ++G K F++ +++ + L A Sbjct: 163 MNLSEPNAGSDLAHVATQAAPDGNGAYRITGQKIFITWGEQELTENIVHLVLARLPDAAA 222 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + F+VP+ L + G+ N + L++K+G ++ T ++F G+L+G Sbjct: 223 GVQG-ISLFIVPKFLLNADGSLGARNAVHAVGLEHKLGIHASPTCTMQFDGATGYLVGRA 281 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------LIDQPVMK 356 + M L+ I + + A YA R V G I +I P ++ Sbjct: 282 GKGLAYMFTMMKAARLNVGIEGHAVAERAYQNARAYAAER-VQGAIDGRDVAIIAHPDVR 340 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R +A +AA AL R A FD A+ ++ A + PI K W Sbjct: 341 RMLAVQKATLAAQRALYLRAAALFDLAEGLADNVARKQAERELDFFIPIIKAWLTDNGVL 400 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-------------LNL 457 + A++ GG+GY+EE +A+ R+ I G+ D+ L L Sbjct: 401 LTNLAIQIYGGAGYVEESGVAQLMRDVRITPIYEGTNGIQAADLAGRKTTGNQGALPLKL 460 Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSIS 492 L +G L + L TL L ++ I + S++ Sbjct: 461 LAEGKTLADALAPTLAHAL----RQAIALAEQSVA 491 >gi|320449278|ref|YP_004201374.1| short-chain specific acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320149447|gb|ADW20825.1| acyl-coa dehydrogenase, short-chain specific [Thermus scotoductus SA-01] Length = 372 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 35/258 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D A+I ++ +++ G + L+G K W S+ + ++++A+ E + FLV Sbjct: 123 LTEPQAGSDAASIRTEARRVPGG-FVLNGLKSWITSAGQAHLYVVMARGEKGISAFLV-- 179 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 E +P GL + + K+G + T E+ F LLG E+ + L Y Sbjct: 180 --EKDTP-GLSFGPPEAKMGLHAAHTAEVRLEGVFVPEENLLG---------EEGRGLAY 227 Query: 318 ----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LDS + V+ V +A A YA R G L + + IAD+ + IAA Sbjct: 228 ALAGLDSGRVGVAAQAVGIARGAFEIAKAYADEREQFGRKLREHQAIAFKIADMHVKIAA 287 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A AL A D + + EA+ A++ A +A V EA++ +GG GY + Sbjct: 288 ARALVLEAARKKDSGERFTLEASTAKLFA-------SSVAVEVTREAVQVLGGYGYHRDY 340 Query: 429 SIARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 341 RVERYYRDAKVTEIYEGT 358 >gi|146284170|ref|YP_001174323.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145572375|gb|ABP81481.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 592 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 36/315 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251 LTE GTD+ I ++ + +DG Y +SG K F++ ++D I L A Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGS 225 Query: 252 R-VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 R + FLVP++L +DGS N L +++K+G +++AT + F G+++G+ N Sbjct: 226 RGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK +EAA R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQRAEAQVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG G+I E + R+ I G+ LD++ ++ G ++ Sbjct: 406 GLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMY 465 Query: 466 EQLFSTLEQDLGSSG 480 + + + S+G Sbjct: 466 QAFVDEIRAFVASAG 480 >gi|113866842|ref|YP_725331.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113525618|emb|CAJ91963.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 594 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 153/327 (46%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKATFLPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAKNIVHLVLARTPTAPEGVKGISLFIV 230 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFMVNADGSTGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I ++SA SV ++++E A+ +AR R S + +I P +K Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVK 345 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A+ + A +A A + A+ + R + A+ + P+ K W +++ Sbjct: 346 RMLMTMRALTEGARAVAYVAAAASDAAHQHPDEAVRQQNQAFYEFLVPVVKGWSTELSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+HYR++ Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|91978757|ref|YP_571416.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91685213|gb|ABE41515.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 593 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 110/511 (21%), Positives = 217/511 (42%), Gaps = 79/511 (15%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERW------DKVEFHPAWHALLRRSIHDG 114 LG+Y TAQ L + + L G++ +KV P W +R I G Sbjct: 29 LGDYDSEITAQVLEEAGKFASDILAPLNRIGDKHGIKLEHNKVTTAPGWPDAYQRWIAAG 88 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + F A ++ + + G + P +T +++ AL + + Sbjct: 89 WNAVSGPEQFGGQGLPSAVNAVCTEIWASSNMAFG--LCPLLTLSAIDALHAHGSDALKN 146 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + K+ S E+ T MQ LTE + G+D+ A+ ++ ++ +DG Y + G K Sbjct: 147 IYLGKLVSGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYKIFGSK 193 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275 F++ M+D + A +G + FL+P+ L + G+ N + + Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLIPKFLVNADGSLGARNDIFPSGV 252 Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 ++K+G ++ T + + G+L+G+ N + M L A+ V + Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLGVALEGVGIADRAY 312 Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLA 377 +A+ YA+ R I +I P +KR A+ A I +TA++ +A Sbjct: 313 QQALAYAQERKQGRAIGSTSTGSDPIIKHPDVKRTLLLMRALTGAARTICYSTAVALDVA 372 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ K +++ AA A ++ PI K + + V + ++ GG G+IEE A+HYR++ Sbjct: 373 ARSDDPKIKADAAARAALLTPIAKAFSTDIGTEVASFGVQIHGGMGFIEETGAAQHYRDA 432 Query: 438 PANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQLFSTLEQDLGSSGKKVI 484 I G+ +D++ LL++ + + + + ++ + G++G + Sbjct: 433 RIAPIYEGTNGIQSIDLVTRKLGVNGGASVWALLDELSVIVKNVEASNDPAFGATGPR-- 490 Query: 485 TILRDSISLCKEDKGLARFLTEKIALASSAA 515 LRD++ +++L EK+ +++ A Sbjct: 491 --LRDALDALTR---ASKYLLEKLGSSTNEA 516 >gi|11499826|ref|NP_071069.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304] gi|2648280|gb|AAB89011.1| acyl-CoA dehydrogenase (acd-11) [Archaeoglobus fulgidus DSM 4304] Length = 402 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 45/279 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K TE + G+D+A I ++ K D Y ++G K F+++ ++D +I+LA+ Sbjct: 118 PLAKGEKICAACYTEPQAGSDVAGIKTRADKDGDE-YVINGTKMFITNGSIADYYIVLAR 176 Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + + FLV R + G+ +LKNK+G R++ T E+ F N Sbjct: 177 TDPNPPKRHHGMSVFLVERDMP-----GVQANKLKNKLGIRASDTAEVVFKNV------- 224 Query: 302 LNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 P E++ + +++ + + V+ + LA+ A HYAR R V Sbjct: 225 ----RVPKENLIGQEGQGFYQTMMFFNITRIPVAFQALGLAQGAFELAYHYARNREVFER 280 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L D V + +A + ++ AA L+++ A F + + + + KY+ K Sbjct: 281 KLADFQVTQEKLAKMRTELEAARLLAYQAA-YFQDKMGMPDPG-----LTAMAKYYTAKA 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A ++ EA++ GG G++ E+ I+R YR+ I G+ Sbjct: 335 AQFIVNEALQIHGGYGFMGEQHISRMYRDVRILEIYEGT 373 >gi|71656085|ref|XP_816595.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70881734|gb|EAN94744.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi] Length = 411 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 43/275 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ + E+ IG + ++E GTD+ +++ +K+ D Y L+G K Sbjct: 144 WLPKVLTGEH--------------IGAMCMSEPGAGTDVLGMSTAAKKLGDEKYVLNGCK 189 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + ++D ++ A+V+G++ F+V E G+P C ++ +K G RS+ +L F Sbjct: 190 TWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGAKI-DKCGMRSSQMCQLFF 244 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLAE-----AIHYARRR 342 N +L+ + E+ K ++ L+ +++S M + +A+ YA R Sbjct: 245 DNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLSAMAIGIADRCVELMTRYASER 298 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + ++R IA+ + AA AL++ ++ S + R+ + K Sbjct: 299 QAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-------RLGSDAAKL 351 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +A V M+ +GG GY E + R +R++ Sbjct: 352 FAAPIAKRVADNTMQVMGGMGYSREMPVERLWRDA 386 >gi|168183589|ref|ZP_02618253.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf] gi|182673284|gb|EDT85245.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf] Length = 377 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 27/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD+ I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDSIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG++N Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RA 358 G + MK L + A ++ + ++ EA+ YA++R ++P+ K Sbjct: 228 KGFITAMKTLSVGRIGVASQAIGIAQAAVDEAVKYAKQRK-----QFNRPIAKFQGIQFK 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ + AA L + A D + +EA+ A KY+ + A ++ +A++ Sbjct: 283 LADMETKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAEAAIQIVNDALQI 335 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459 GG GYI++ I R YR+ +I G+ + + NLL+ Sbjct: 336 HGGYGYIKDYKIERLYRDVRVIAIYEGTSQVQQMVIASNLLK 377 >gi|92114549|ref|YP_574477.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] gi|91797639|gb|ABE59778.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] Length = 603 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ I ++ Q + Y ++G K F+S+ D ++LA++ EG Sbjct: 165 LTEPQCGTDLGLIKTRAQPDGEEGYRITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L D G N + L++K+G NAT + F GFL+G+ + Sbjct: 225 KGISLFVVPKYLPDAEGGIGERNAVSCGSLEHKMGIHGNATCVMNFDGARGFLVGEPHKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353 + M + + I + M +S A+ YAR R +SG D+P Sbjct: 285 LACMFTMMNVARIGVGIQGLGLMEISFQNALAYARERLQMRALSGTQNTDKPADPIIAHP 344 Query: 354 -VMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYARIMA---PITKYWCCKM 407 V + + AL + + +LA++ + + S SE + ++ PI K + ++ Sbjct: 345 DVRRMLLTQKALAEGGRMMVLYAAQLADTVECSASDSERESAETLLGLLTPIVKAFLTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 E ++ GG GYI E + ++ R++ + G+ LD+L L+ +G L Sbjct: 405 GFEATNEGVQVFGGHGYIREWGMEQYVRDARITRLYEGTTGIQALDLLGRKVLMSQGEAL 464 >gi|114569089|ref|YP_755769.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris MCS10] gi|114339551|gb|ABI64831.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10] Length = 596 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/343 (22%), Positives = 150/343 (43%), Gaps = 52/343 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE GTD+ + ++ +DG Y ++G K ++SS D ++LA++EG Sbjct: 164 MNLTEPHCGTDLGLLRTKAVPQADGSYKITGQKIWISSGEHDMAENIIHLVLARIEGAPE 223 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ + D G+ N L++K+G NAT +++ G+L+GD N Sbjct: 224 GVKGISLFVVPKFIPDADGNPGTRNAAKCGGLEHKMGIHGNATCVMDYDEATGWLVGDEN 283 Query: 304 VSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGI--------- 348 + +KI+ I ++ A + V +LAEA + +A+ R + Sbjct: 284 ------KGLKIMFIMMNEARLGVGLQGYALAEAAYQQSLGFAKDRLQGRSLTGPKNQDGP 337 Query: 349 ---LIDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPI 399 +I P ++R + D + AA TAL L + R + Y ++ PI Sbjct: 338 ADPIIVHPDVRRMLMDQKSFVEAARCFALWTALQGDLEEKASDPAMREKAGDYMALLTPI 397 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV----- 454 K + +++ ++ GGSG+ EE ++ R++ I G+ LD+ Sbjct: 398 VKGYLTGKGYDMVSSGLQIHGGSGFTEEWGASQLLRDARITLIYEGTNGIQALDLVGRKL 457 Query: 455 -LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 +N + T F +L + + + + + + D+ + K+ Sbjct: 458 AMNGMRPITTFFAELDAFVAEGGNDETQPFVQAVADTKAKLKQ 500 >gi|296446824|ref|ZP_06888762.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] gi|296255699|gb|EFH02788.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] Length = 590 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 54/317 (17%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+A + ++ +++ DG Y L+G K F+ Sbjct: 150 PKMISGEWTAT-------------MNLTEPQAGSDLALLRTRAERVGDGSYRLTGQKIFI 196 Query: 236 SSPMSDA------FIMLAQVEGRVGC-----FLVPRLLED-----GSPNGLCYQRLKNKI 279 + D F++ + G FL P+ L D G N L ++ K+ Sbjct: 197 TYGEHDLSENILHFVLARLPDAPPGTRGISLFLAPKFLPDADGRPGERNDLRCAGVERKL 256 Query: 280 GNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334 G + T + + + G FL+G+ N + M +++A +SV V+LAE Sbjct: 257 GIHAAPTCTMAYGDNGGARAFLVGEENAGLACMFTM-----MNNARLSVGLQGVALAERA 311 Query: 335 ---AIHYARRR---HVSGG----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 A+ YAR R GG ++ P + R + + AAA A+SF A S D A+ Sbjct: 312 TQAALAYARERLQGRAPGGPDPSPIVAHPDVARMLLTMKAQTAAARAISFLTAASLDRAR 371 Query: 385 SRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +S EAA ++ P+ K + + + ++ GG G+IEE A+ R++ Sbjct: 372 RQSGEAAREAEERAGLLTPLAKAYSTDIGVETASLGVQVHGGMGFIEETGAAQLLRDARI 431 Query: 440 NSILLGSGNAMVLDVLN 456 I G+ +D++ Sbjct: 432 TPIYEGTNGIQAIDLVT 448 >gi|124265612|ref|YP_001019616.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium petroleiphilum PM1] gi|124258387|gb|ABM93381.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium petroleiphilum PM1] Length = 596 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 54/367 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + AL T T + + PK+ S + T + LTE GT Sbjct: 128 MYPGLTHGAYEALHTHGTDEQKRTYLPKLTSGHWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + S+ + +DG Y ++G K F+SS D ++LA++ +G G F+V Sbjct: 175 DLGLLRSKAEPQADGSYRITGSKIFISSGEHDLAENIVHLVLARLPDAPQGSKGISLFVV 234 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + L++K+G NAT ++ G L+G+ + + M Sbjct: 235 PKFLVQPDGSLGARNPIWCTGLEHKMGIHGNATAQISLDGAVGTLVGEPHKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355 L + S+ V+ A+ YA+ R +SG D+P + Sbjct: 295 NAARLGVGMQSLGLTEVAYQNAVAYAKDRIQMRSLSGPKAPDKPADPIIVHPDVRKMLLT 354 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 RA A+ ++ AL S + R + A ++ PI K + A + Sbjct: 355 ARAYAEGGRALSLYCALLIDRELSHPDEAVRRDAADQVALLTPIVKAFLTDNAWLATSHC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG GYI E + ++ R++ N I G+ LD+L L + G L F QL Sbjct: 415 LQVYGGHGYIREWGMEQYVRDARINMIYEGTNTIQSLDLLGRKVLADNGAKLKKFGQLIV 474 Query: 471 TLEQDLG 477 ++ G Sbjct: 475 DFVEEEG 481 >gi|271967603|ref|YP_003341799.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270510778|gb|ACZ89056.1| acyl-CoA dehydrogenase domain protein [Streptosporangium roseum DSM 43021] Length = 386 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 39/282 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GR 252 G+ LTE GTD+ I Q + + DG Y ++G K W ++ +D +L + Sbjct: 121 GIALTEPAAGTDLQGI--QTRAVRDGDHYVINGTKTWITNARHADPMPVLVKTSVTEPAH 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308 G L+ L+E G+P G R K+G + T E+ +L D+ V G Sbjct: 179 RGMSLI--LVEAGTP-GYTVSRDLPKLGYKGTETCEI--------VLEDVRVPASRLLGG 227 Query: 309 VED---MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 VE + L L+ ++++ V +++ A++Y+R RH G + D ++ +A Sbjct: 228 VEGRGMQQALSALELGRVNIAARAVGISQCAYDAALNYSRERHAFGHPIADFQAIQLKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A DI AA L++ A + SE A + KY+ ++A V EAM G Sbjct: 288 DMATDIQAARLLTYWAATRSESGAVNSE--------AAMAKYFASEVALRVTMEAMRIHG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 G GY +E I R YR++P +I G+ + + + L GT Sbjct: 340 GYGYSQEFVIERLYRDAPLMAIGEGTNDVQRMVIARSLISGT 381 >gi|257095856|ref|YP_003169497.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048380|gb|ACV37568.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 378 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 30/285 (10%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T P+ + + LTE G+D AAI+++ + D + L+G K F++ Sbjct: 98 KYGTDEQKETWLKPLARGEMLGCFCLTEPHTGSDAAAISTRADRDGDH-FVLNGVKQFIT 156 Query: 237 S----PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + ++ F + + G+ G CFLVP + G R++ K+G ++ T ++ Sbjct: 157 TGKYAQVAIVFAVTDKAAGKKGISCFLVPT-----TTPGYIVARIEEKMGQHASDTAQIL 211 Query: 291 FSNT---FGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 F + LLG ++ +E +I I A SV R + A+ YA+ R Sbjct: 212 FEDCRIPASCLLGREGDGYRIALSNLEAGRIGI----AAQSVGMARAAFDAAVQYAKERV 267 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +I+ + AD+A I AA + +R A D K +EA+ A++ A Sbjct: 268 TFGKPIIEHQAVSFRFADMATQIDAARLMVWRAATFKDAGKPCLKEASMAKMFAS----- 322 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +MA V ++A++ +GG GY+ + + R YR+ I G+ + Sbjct: 323 --EMAEKVCSDAIQILGGYGYVSDFPVERIYRDVRVCQIYEGAND 365 >gi|159043391|ref|YP_001532185.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911151|gb|ABV92584.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL 12] Length = 592 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 49/360 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG--- 251 + LTE + GTD+ I ++ + DG Y ++G K ++S+ MS+ I +LA++ G Sbjct: 161 MNLTEPQCGTDLGLIRTKAEPQEDGSYAITGQKIWISAGEHDMSENIIHLVLAKIPGGPE 220 Query: 252 ---RVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ L +DGS N + L++K+G NAT + + GFL+G+++ Sbjct: 221 GVKGISLFIVPKFLVNDDGSLGARNAVSCGGLEHKMGIHGNATCVMNYDGATGFLVGEMH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LID 351 + M L A+ + ++ A+ +AR R ++G +I Sbjct: 281 KGLRAMFTMMNEARLSVALQGYAQGDIAYQNALGFARDRLQGRDITGAQAPNKPADPIIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYARIMAPITKYWCCKMAP 409 P ++R + D + A AL F A D+A +E A ++ P+ K + Sbjct: 341 HPDVRRNLMDQKSFVEGARALVFWGATLIDQAHRCKDAEADAMISLLIPVMKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 A + +GGSG+ E + + R++ I G+ LD++ Sbjct: 401 ETTVLAQQTLGGSGFTREWGLEQFVRDARIAMIYEGTNGIQSLDLVG------------- 447 Query: 470 STLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKI-ALASSAAALYRAGMNDIAD 527 + LG +G K + D + + KE++ A + + L +++ L AGM ++D Sbjct: 448 ----RKLGLNGGKTVMAFFDMVKTFLKENEDNAELKSGFLDPLKAASKDLQAAGMYFMSD 503 >gi|218779149|ref|YP_002430467.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760533|gb|ACL02999.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 602 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 43/295 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252 + LTE + G+ ++ IT+ +G Y + GHK F+S DA +MLA+++G Sbjct: 162 MALTEPQAGSSLSDITTTAYPTDEGYYKIRGHKIFISGGDHDALDNIVHLMLARIDGAPA 221 Query: 253 ----VGCFLVP--RLLEDGSP--NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGD 301 + F+VP R+ DGS N + + +K+G + EL E ++ G+L+G+ Sbjct: 222 GTKGISLFVVPKKRVEPDGSLVFNDIVCSSVYHKLGYKGMPLTELSIGEKNDCRGYLIGE 281 Query: 302 ----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---- 353 L + + +I + L +A ++ + SL YAR R I P Sbjct: 282 PHKGLKCMFQMMNEARIEVGLGAAGIATAAYYASL----EYARDRPQGRKITEKDPTQPQ 337 Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +++R+I + +L + + + LA D + + + I+ PI Sbjct: 338 TPIINHADVKRMLLLQRSIVEGSLSLLTQCGMYYDLALVADNEEDKEKYHLLLEILTPIA 397 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 K + +M ++ ++C GG GY ++ + ++YR+ + I G+ +D+L Sbjct: 398 KSFPSEMGVLSVSNGLQCFGGYGYCDDFPLEQYYRDIRIHPIHEGATGIQAMDLL 452 >gi|188582682|ref|YP_001926127.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi BJ001] gi|179346180|gb|ACB81592.1| acyl-CoA dehydrogenase domain protein [Methylobacterium populi BJ001] Length = 596 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 145/339 (42%), Gaps = 45/339 (13%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M P +T ++ AL+ VH A K Y P M + + + LTE GTD+ Sbjct: 126 MYPGLTQGAIAALL----VHGSEAQKA---TYLPK----MVEGAWTGTMNLTEPHCGTDL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260 + ++ DG Y L+G K F+S+ D +++A++EG + F+VP+ Sbjct: 175 GLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPK 234 Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L EDGS N + L++K+G NAT + + G+L+G N + M Sbjct: 235 FLVNEDGSLGDRNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGQENRGLAAMFVMMNE 294 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQ--------PVMKRAIADI- 362 L + + + A+ YAR R ++G D+ P ++R + I Sbjct: 295 ARLAVGVQGLGQSEAAYQNAVAYARERLQGRALTGAKAPDKAADPIIVHPDVRRTLMQIR 354 Query: 363 ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A + AA TAL+ +A+ +A R +M P+ K A EA + Sbjct: 355 AFNEAARALILWTALNSDIAHRSPDAGQRQAADDMLGLMTPVVKGVLTDRGFANAVEAQQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY+EE +++ R++ I G+ +D++ Sbjct: 415 MFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIG 453 >gi|313676498|ref|YP_004054494.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] gi|312943196|gb|ADR22386.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] Length = 379 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 51/292 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY-CLS 229 K W PK+ + E+ +G GLTE G+D + + + DG Y ++ Sbjct: 108 KRWLPKLATAEW--------------LGAWGLTEPNTGSDAGNMKTTA--VQDGDYWVIN 151 Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 G K +++ +S ++ G +G + ++E+G+ G R +NK+G R + T Sbjct: 152 GAKNWITHGISRDIAVVIVRTGEIGDSHGMTAFVIENGT-EGFKGGRKENKLGMRLSETA 210 Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339 E+ F + +LG NV G ++ MK+L D +S++ + + +AE A+ Y+ Sbjct: 211 EMIFEDCRVHKDNILG--NVGEGFIQAMKVL---DGGRISIAALSLGIAEGAYEAALAYS 265 Query: 340 RRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + RH +QP+ + +AD+A ++ A L+F+ A+ + KS ++E+A A Sbjct: 266 KERH-----QFNQPISSFQGIAFKLADMATELEGAKLLTFQAADLKNNGKSVTKESAMA- 319 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ ++A EA++ GG GY ++ + ++YR+S +I G+ Sbjct: 320 ------KYYASEVAVKNSVEAVQIFGGYGYTKDYPVEKYYRDSKLCTIGEGT 365 >gi|196248594|ref|ZP_03147295.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|196212319|gb|EDY07077.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 382 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 125/303 (41%), Gaps = 43/303 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK S E + + +TE G+D+A I++ K Sbjct: 99 IASYGTEEQKQKWLPKCISGE-------------LITAIAMTEPGAGSDLANISTTAVKD 145 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270 D Y ++G K F+++ + I++A C P ++E +P G Sbjct: 146 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPHAKPPHRGISLLVVERDTP-GF 196 Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 R K+G + T EL F + LLG+ + + L AI + + Sbjct: 197 TRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 256 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 V + HY ++R G + + ++ +A++A DIA R+ K Sbjct: 257 AEVMFSLVKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIV 316 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + A K+W +MA V AEAM+ GG GY+EE IAR YR+ P ++I G+ Sbjct: 317 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 369 Query: 448 NAM 450 M Sbjct: 370 EMM 372 >gi|260460334|ref|ZP_05808586.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259033979|gb|EEW35238.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 589 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 102/439 (23%), Positives = 184/439 (41%), Gaps = 60/439 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L+ G G D V P W L RR I G + Sbjct: 31 LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLKDASVITPPGWKELYRRWIDGGWNA 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175 ++ + A ++ A + G + P++T ++ AL + + + Sbjct: 91 LSGPEAYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASEDLKAKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE + G+D+AA+ ++ + DG Y + G K F+ Sbjct: 149 EKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFI 195 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278 + +D I L A G + FLVP+ L +DGS N + L++K Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFLVGDDGSLGARNDVFCSGLEHK 254 Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +G ++ T + + + F G+L+G+ N + M L + V+ Sbjct: 255 LGIHASPTCTMIYGDGFQGAKPGAIGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEA 314 Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + +AI YA R + G+ ++ P ++R + + A A+S+ A++ D Sbjct: 315 ATQKAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374 Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ S +EAA+ A ++ P+ K + + V + ++ GG G+IEE A YR+ Sbjct: 375 MARVSSGDEAAHWRDRANLLTPLAKAFSTDVGVEVASLGLQVHGGMGFIEETGAAALYRD 434 Query: 437 SPANSILLGSGNAMVLDVL 455 + I G+ +D++ Sbjct: 435 ARIAPIYEGTNGIQAIDLV 453 >gi|219847033|ref|YP_002461466.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541292|gb|ACL23030.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM 9485] Length = 394 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 16/243 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLV 258 LTE G+D A I + +++ DG Y L+G K W ++ +D ++ A+ E GR+G FLV Sbjct: 137 LTEPYVGSDAAHIRTTAKRV-DGGYLLNGEKRWIGNATFADVIVVWAKDEETGRIGGFLV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--I 316 E G+P G +++ KI RS +++ +N F L ++ + IL Sbjct: 196 ----EKGTP-GYQATKIEGKIAKRSVINADIKLNNVFVPEANRLPLARSFRDTANILKNT 250 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 A +V + + A+ Y +R G + ++++ + + D+ A +++RL Sbjct: 251 RYGVAWEAVGHAQAAYELALDYTLQREQFGRPIAGFQLVQQKLVQMLGDLTAIQLMAWRL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + DE +++ E MA + K +C A ++A E +GG+G + +R IARH+ + Sbjct: 311 SKLRDEDENQITEG-----MASLAKQYCAGKARQIVALGREVLGGNGILLDRHIARHFAD 365 Query: 437 SPA 439 A Sbjct: 366 IEA 368 >gi|50552918|ref|XP_503869.1| YALI0E12573p [Yarrowia lipolytica] gi|49649738|emb|CAG79462.1| YALI0E12573p [Yarrowia lipolytica] Length = 417 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 ++L TTP + + P + + + IG L ++E G+D+ ++ + +K Sbjct: 133 LSLHTTPEQGEKYLPDLIAGK--------------KIGALAMSEAGAGSDVVSMKTTAKK 178 Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + DG Y L+G K W + P +D ++ A+ + G + + + +G R +K+ Sbjct: 179 V-DGGYVLNGTKMWITNGPDADYMVVYAKTDPAAGARGITAFIVEKGMDGFSCARKLDKL 237 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLA 333 G R + T EL F + F G +LG +N G V + + L+ +++ + M +L Sbjct: 238 GMRGSNTGELIFEDVFVPEGNVLGKIN---GGVYVLMSGLDLERLVLAAGPIGLMHRALD 294 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 EA+ Y R G + +++ +AD+ A+ A ++ A + D + S+E A Sbjct: 295 EALPYVHTRTQFGKPIAHNQLLQGKLADMYTAFASTRAFQYQTAKAADLGQHTSKECASV 354 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++A + A V +A++C+GG GY+ E R R++ I G+G + V Sbjct: 355 ILLA-------AEQATQVALDAIQCMGGMGYMMETVPQRLLRDAKLYEI--GAGTSEVRR 405 Query: 454 VL 455 +L Sbjct: 406 ML 407 >gi|330826395|ref|YP_004389698.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329311767|gb|AEB86182.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 599 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 45/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE G+D+A I S+ + +DG Y + G K F++ M+D + L A Sbjct: 162 MNLTEPNAGSDLALIRSRAEPQADGSYRVFGQKIFITYGDHDMTDNIVHLVLARLPDAPA 221 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V G + FLVP+ L + G+ N +++K+G ++ T L F + G+LL Sbjct: 222 GVRG-ISLFLVPKFLVNADGSLGARNDAHCVSIEHKLGIHASPTCVLAFGDNGGAVGYLL 280 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGIL 349 G+ N +E M I ++ A + V ++LAE A+ YAR R V+G L Sbjct: 281 GEANRG---LEYM--FIMMNEARLGVGLQGIALAERAYQQALAYARERKQGRDAVTGEAL 335 Query: 350 ID---QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400 + P ++R + + + A A+++ A D +A + + A M PI Sbjct: 336 VTIDRHPDVRRMLMLMKSRVEACRAVAYYTAGLLDRAHAGADAGQKQRDLFLAEFMIPIV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K +M V + ++ GG G+IEE A+H+R++ +I G+ Sbjct: 396 KGGSTEMGIDVTSLGIQVHGGMGFIEETGAAQHWRDARITTIYEGT 441 >gi|121603373|ref|YP_980702.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120592342|gb|ABM35781.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 376 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 34/288 (11%) Query: 178 IFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 I R +P K P+ + + LTE G+D +++ + K DG Y LSG K Sbjct: 95 ILMRYGNPAQKKQWLMPLAQGDLLGAFCLTEPHTGSDASSLRTTAVKDGDG-YVLSGVKQ 153 Query: 234 FLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 F++S + ++ V G+ G F+VP G RL++K+G S+ T Sbjct: 154 FITSGQNGQVAIVIAVTDKGAGKKGMSAFIVPT-----DAPGYSASRLEDKLGQHSSDTA 208 Query: 288 ELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 ++ F N G ++ G +E +I I S M+ S V++A YA+ Sbjct: 209 QVNFDNCRIPAENLIGAEGEGYKIALGGLEGGRIGIAAQSVGMARSAFEVAVA----YAK 264 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + + + +AD A + AA L + A+ D + +EAA A++ A Sbjct: 265 ERQSFGSAIFNHQAVGFRLADCATQLEAARQLIWHAASLRDAGRPCLKEAAMAKLFAS-- 322 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +MA V + A++ +GG GY+ + + R YR+ I G+ + Sbjct: 323 -----EMAEKVCSAAIQTLGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|94971873|ref|YP_593913.1| acyl-CoA dehydrogenase-like [Deinococcus geothermalis DSM 11300] gi|94553924|gb|ABF43839.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 598 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 37/317 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + L+E G+ +A IT+ DG Y ++G K ++S+ +S+ I +LA+++G Sbjct: 161 MALSEPHAGSGLADITTTATPRGDGTYSITGTKMWISAGEHELSENIIHLVLARIKGAPA 220 Query: 253 ----VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VPR + DGS N + L +K+G R L F T G L+G Sbjct: 221 GVKGISLFIVPRYRVNADGSLGESNNVVLAGLNHKMGYRGTTNTLLNFGEGGETIGELIG 280 Query: 301 DLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-- 354 + G + M +I + + + ++ +G SL A + RH S +PV Sbjct: 281 EPGRGLGYMFHMMNSARIGVGMGAVMLGYAGYLASLEYARERRQGRHASNKDPESEPVRI 340 Query: 355 -----MKRAIADIALDIAAATALSFRLANSFDE-----AKSRSEEAAYARIMAPITKYWC 404 ++R + + AL A+ DE A+ R + ++ PI K W Sbjct: 341 IEHADVRRLLLRQKSIVEGGLALGLYAAHLEDEIETGPAEEREDNVLLLDLLTPIVKSWP 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462 + + +++A++ +GG+GY + + +YR++ N I G+ D+L + + G Sbjct: 401 SRYSQEALSDAIQVMGGAGYTRDYPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKVTQAGG 460 Query: 463 NLFEQLFSTLEQDLGSS 479 L ++ DL +S Sbjct: 461 RGLHVLLERIQTDLQAS 477 >gi|282882090|ref|ZP_06290731.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus lacrimalis 315-B] gi|281298120|gb|EFA90575.1| acyl-CoA dehydrogenase domain-containing protein [Peptoniphilus lacrimalis 315-B] Length = 642 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 18/274 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T ++ Y L+G K F++ +P +D +++ A Sbjct: 112 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAELDGDYYILNGGKIFITNAPKADFYVVFAV 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + +K+G RS++T EL F+ + N+ Sbjct: 171 TTPGIGTHGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELTFNKV---KVPKENLLGQE 227 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + +I + LD + ++ + +A+ A+ YA+ R G + Q + IAD+ Sbjct: 228 GQGFRIAMQTLDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQAVAFKIADM 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I AA + + A + S EAA A+ A T +C EA++ GGS Sbjct: 288 ATKIRAARLMIYSAAEMKTNHEKYSMEAAMAKTYASETALFCAN-------EALQIHGGS 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GY++ + R YR++ +I G+ + V N Sbjct: 341 GYMKGMEVERFYRDAKITTIYEGTSEVQRVVVAN 374 >gi|119505099|ref|ZP_01627175.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119459081|gb|EAW40180.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 587 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 38/327 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----- 249 + LTE G+D+ + ++ ++ D Y + G K +++ DA ++LA++ Sbjct: 163 MNLTESGAGSDLGPVKTRAERDGD-RYRIFGQKIYITWGDHDATDNIVHLVLARLPDAPA 221 Query: 250 -EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L + G N ++K+G + T + + + G+L+G Sbjct: 222 GSKGISLFIVPKYLVNADGSLGERNDAFPVSTEHKLGIHGSPTCVMAYGDKDGAIGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + N + M L + V + +A+ YAR R G +I+ +KR + Sbjct: 282 EENNGLACMFTMMNEARLKVGLQGVGASEGAYQKAVAYARERVQGGVAIIEHADVKRMLM 341 Query: 361 DIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + I A AL++ A + D EA +SE+ +M P+ K WC ++ + + Sbjct: 342 TMRALIEAMRALAYNEAVTMDLAHYAEADVKSEQRQRIDLMIPVIKGWCTEIGVELTSLG 401 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG-----------T 462 ++ GG G+IEE A++ R+ I G+ D++N L G Sbjct: 402 VQVHGGMGFIEETGAAQYLRDVRITPIYEGTNGIQAADLVNRKLARDGGSGMEAMQTQIA 461 Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRD 489 L +QL + +LG+ GK + + L D Sbjct: 462 ELTQQLLQSSHPELGALGKSLASALAD 488 >gi|254293297|ref|YP_003059320.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254041828|gb|ACT58623.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 593 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 49/350 (14%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 +M+ M P +T + A++ + + + PK+ S E+ T Sbjct: 116 MMSSANMAFAMYPGLTHGAYSAIVAGGSQEQKETYVPKMVSGEWSGT------------- 162 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ + ++ +DG Y ++G K ++S +D ++LA++EG Sbjct: 163 MNLTEPHCGTDLGLMKTKAAPQADGTYKITGQKIWISGGENDFTDNIIHLVLAKIEGAPE 222 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V F+VP+ + E+G+P N L+ K+G NAT + + G+L+G+ N Sbjct: 223 GIKGVSLFIVPKFILDENGNPGERNACGCGGLEEKMGIHGNATCVMNYDGATGYLVGEPN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILID 351 + M L + ++ +S A+ +A+ R VSG +I Sbjct: 283 KGMRTMFVMMNAARLGVGMQGLAQSEISYQNAVDFAKDRIQGRSVSGVKAPEKAADPVIV 342 Query: 352 QPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++R + D A + T+L L + ++ +R + Y ++ P+ K + Sbjct: 343 HPDVRRMLMDQKAFNEGARAFSLWTSLQNDLEHRAEDEATREKAGDYMGLLTPVIKAFLT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +AM+ GGSG+ E + + R+ I G+ LD++ Sbjct: 403 DKGLKGCIDAMQIHGGSGFTREWGMEQFVRDCRIALIYEGTNGVQALDLV 452 >gi|261419842|ref|YP_003253524.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297530200|ref|YP_003671475.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|319766656|ref|YP_004132157.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|261376299|gb|ACX79042.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297253452|gb|ADI26898.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|317111522|gb|ADU94014.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 380 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYARQVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V G+ G ++ L+ G + +K+G R++ T EL F N + NV Sbjct: 171 VTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P + K +Y LD +S++ + V +A+A + YA+ R G + ++ +A Sbjct: 228 DPQKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQPISKFQAIQFKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++I A + ++ A D+ K ++EA++A++ A + C +A++ G Sbjct: 288 DMAMEIELARNMVYKAAWLKDKGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GY++E + RH R+ Sbjct: 341 GYGYMKEYGVERHLRD 356 >gi|209516716|ref|ZP_03265568.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209502833|gb|EEA02837.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 606 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 96/422 (22%), Positives = 164/422 (38%), Gaps = 65/422 (15%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHD-GLHCSIWDRSFEPVVR 129 +E+ N + A+ G+ F AW A H L + PV+ Sbjct: 50 EEVLHPINQKADEAGAHFADGQVTTPAGFKAAWDAYREAGWHSLSLASELGGGGLPPVMS 109 Query: 130 KQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA 189 ++RAA + + G SP+ A M+ + V PK+ S E+ T Sbjct: 110 VPISEMRAATGHSFSMY--GSFCSPA---AYMLGTLAPDWVKTHVVPKLASGEWTAT--- 161 Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 + +TE + GTD+ IT++ DG + ++G+K F+S D I Sbjct: 162 ----------MSMTEPQAGTDLRQITTRAVPQEDGTWLITGNKIFISGGDHDLTDNIVHI 211 Query: 245 MLAQV---EGR-------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE 288 +LA+ EGR V FLV + D G NG+ + +++K+G ++AT Sbjct: 212 VLAKAVDEEGRVPQSLSAVNVFLVSKQNIDPQTGVLGDRNGVHVRSIEHKMGIEASATCA 271 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYL------DSAIMSVSGMRVSLAEAIHYARRR 342 L+F N G+ + G +M + L +A+ + ++L A+ YAR R Sbjct: 272 LDFENAVGYRIASTE-GKGTTANMAPMFRLMNYARVGTAVSGIGYAEIALQNAVEYARER 330 Query: 343 H------------VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +I P ++R + + + A A + + A EA+ SE A Sbjct: 331 RSGRAASSSRDTKTVADPIIAHPDVRRLLLESSAFAEGARAGAMKAAVLQSEARYLSERA 390 Query: 391 AYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A + ++ P+ K + + GG GY+++ I R R S I Sbjct: 391 ARQKAADILDLLTPVMKAFFTDRGFETTVACQQVFGGHGYVKDYGIERLVRNSRITQIYE 450 Query: 445 GS 446 G+ Sbjct: 451 GA 452 >gi|78065649|ref|YP_368418.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77966394|gb|ABB07774.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 596 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ + G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|13476195|ref|NP_107765.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] gi|14026955|dbj|BAB53551.1| probable acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] Length = 589 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 60/440 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWDK-VEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L+ G G D V P W L RR I G + Sbjct: 31 LGEDLVDAVLGEAGRFATEEVAPLYKIGDEHGAVLRDAAVTMPPGWKELYRRWIDGGWNA 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175 + + A ++ A + G + P++T ++ AL + + + Sbjct: 91 LSGPEDYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASEALKAKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE + G+D+AA+ ++ + DG Y + G K F+ Sbjct: 149 AKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPAGDGTYRIFGQKIFI 195 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278 + +D I L A G + FLVP+ +DGS N + L++K Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFFVNDDGSLGARNDVFCSGLEHK 254 Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +G ++ T + + + F G+L+G+ N + M L + V+ Sbjct: 255 LGIHASPTCTMIYGDGFRGATPGAIGWLIGEENKGLACMFTMMNNARLAVGMQGVAVAEA 314 Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + +AI YA R + G+ ++ P ++R + + A A+S+ A++ D Sbjct: 315 ATQKAIAYANERRQGKAADYAGAGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374 Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ S ++AA+ A ++ P+ K + + V + ++ GG G+IEE A YR+ Sbjct: 375 MARVSDGDQAAHWRDRANLLTPLAKAFSTDVGVEVASLGVQVHGGMGFIEETGAAAFYRD 434 Query: 437 SPANSILLGSGNAMVLDVLN 456 + I G+ +D++ Sbjct: 435 ARIAPIYEGTNGIQAIDLVT 454 >gi|121606175|ref|YP_983504.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120595144|gb|ABM38583.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 593 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 63/372 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+ + + + +A K+ S E+ T + LTE + G+ Sbjct: 124 LCPMLTDGAIEALLVAGSDELKRKFAAKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+AA+ S+ + DG Y + G K F++ D ++LA+V G + F+V Sbjct: 171 DLAAVRSRAEPQEDGTYKVFGTKIFITYGEHDMTGNIVHLVLARVPGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N +++K+G +++ T L+F + G+L+G N +E Sbjct: 231 PKFMVNDDGSLGERNDAWCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGQENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGI--------LIDQPVMKR 357 M I +++A +V +++A +A+ +A R S + +I+ P +KR Sbjct: 288 YM--FIMMNAARFAVGMQGIAIADRAYQQAVRFAHDRAQSRDLAGSAGPVAIINHPDVKR 345 Query: 358 AIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + + A AL++ A + D A +R + A + P+ K + +M+ + Sbjct: 346 MLLTMRAHVEGARALAYVAAAASDMAHHAADDATRIQNQAVYEYLVPVVKGFSTEMSIDM 405 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG--TNLFE 466 + ++ GG GYIEE A+HYR++ +I G+ D++ L +KG Sbjct: 406 ASLGVQVHGGMGYIEETGAAQHYRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALC 465 Query: 467 QLFSTLEQDLGS 478 +T EQDL + Sbjct: 466 DRIATTEQDLAA 477 >gi|116250362|ref|YP_766200.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115255010|emb|CAK06084.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 598 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 45/340 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +M P +T ++ AL+ VH S E T M + + + LTE GTD Sbjct: 125 MMYPGLTQGAIAALL----VHG-------SDEQKATYLPKMVDGTWSGTMNLTEPHCGTD 173 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP 259 + + ++ +DG Y +SG K F+S+ ++D I +LA++EG + F+VP Sbjct: 174 LGMLRTKAVPQADGSYKISGQKIFISAGEHDLTDNIIHLVLARIEGAPDGTKGISLFIVP 233 Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + L +DG+P N + +++K+G +NAT + + GFL+G N + M Sbjct: 234 KFLVGKDGAPGARNAVSCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMFVMMN 293 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIADI 362 L + ++ ++ A YAR R +SG +I P ++R + I Sbjct: 294 EARLMVGLQGIAISEIAYQNAASYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTI 353 Query: 363 -ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 A + A TAL +A+ + K R ++ PI K A Sbjct: 354 RAFNEAGRAFLLWTALKSDIAHRAADEKERQTADDILGLVTPILKGVMTDKGFDHAVMAQ 413 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 414 QVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453 >gi|319784729|ref|YP_004144205.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170617|gb|ADV14155.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 589 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 184/439 (41%), Gaps = 60/439 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWDK-VEFHPAWHALLRRSIHDGLHC 117 LG+ ++ E R A L+ G G D V P W L RR I G + Sbjct: 31 LGDDLVDAVLGEAGRFATEEVAPLYTIGDRQGAALKDAAVTTPPGWKELYRRWIDGGWNA 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL--MTTPRVHKDWA 175 + + A ++ A + G + P++T ++ AL + + + Sbjct: 91 LSGPEEYGGQALPTMLGVAALEMWNSAAMAFG--IGPTLTMGAVEALDKHASTDLKAKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE + G+D+AA+ ++ + + DG Y + G K F+ Sbjct: 149 EKLVSGEWMGT-------------MNLTEPQAGSDLAALRARAEPVGDGSYRIFGQKIFI 195 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--ED---GSPNGLCYQRLKNK 278 + +D I L A G + FLVP+ L +D G+ N + L++K Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFLVGDDGALGARNDVFCSGLEHK 254 Query: 279 IGNRSNATVELEFSNTF--------GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +G ++ T + + + F G+L+G+ N + M L + V+ Sbjct: 255 LGIHASPTCTMIYGDGFQGTKPGAVGWLIGEENKGLACMFTMMNNARLCVGMQGVAVAEA 314 Query: 331 SLAEAIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 + +AI YA R + G+ ++ P ++R + + A A+S+ A++ D Sbjct: 315 ATQKAIAYANERRQGKAASYTGTGMAPIVHHPDVQRNLLTMKALTQTARAISYSCAHAID 374 Query: 382 EAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ S +EAA+ A ++ P+ K + + V + ++ GG G+IEE A YR+ Sbjct: 375 MARVSAGDEAAHWRDRANLLTPLAKAFSTDIGVEVASLGLQVHGGMGFIEETGAAAFYRD 434 Query: 437 SPANSILLGSGNAMVLDVL 455 + I G+ +D++ Sbjct: 435 ARIAPIYEGTNGIQAIDLV 453 >gi|169628281|ref|YP_001701930.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977] gi|169240248|emb|CAM61276.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus] Length = 382 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 94/380 (24%), Positives = 160/380 (42%), Gaps = 50/380 (13%) Query: 111 IHDGLHCSIWDR-SFEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSAS 160 IH H WDR + PV + +A + +Y+ + +L+A + T S Sbjct: 21 IHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGCS 80 Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219 V+ + W F E P T IG LTE G+D AA+ + Sbjct: 81 AVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGAYCLTEPECGSDAAALRTSAI 140 Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQR 274 + D Y L+G K F+S + +D ++++A+ G + +VP+ G+P GL + Sbjct: 141 RQGDE-YVLNGVKQFISGAGAADLYVVMARTGGPGPRGISTIVVPK----GTP-GLSFGA 194 Query: 275 LKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 + K+G + T ++ F + GF + ++ G L+ A Sbjct: 195 PERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGG---------RLNIAS 245 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+ G R +L + I Y R R G LI ++ +AD+A ++ AA + +R A + E Sbjct: 246 CSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVTE 305 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 R+ E + + K + V EA++ GG GY+ E I + R+ + I Sbjct: 306 GDPRAAE------LCAMAKRIATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQI 359 Query: 443 LLGSGNAM-VLDVLNLLEKG 461 L G+ M V+ L+E+G Sbjct: 360 LEGTNEIMRVIVSRKLIEQG 379 >gi|121533413|ref|ZP_01665241.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] gi|121307972|gb|EAX48886.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] Length = 379 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 22/266 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD A + Q + DG Y L+G K F+++ ++ +++ A Sbjct: 113 PLIKGKKLGAFGLTEPNAGTDAA--SQQTTAVLDGDHYVLNGSKIFITNGGEAEIYVVFA 170 Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + G + +LE G P G + + ++K+G R++ T+EL F + + N+ Sbjct: 171 MTDKTKGVKGISAFILEKGMP-GFTFGKKEHKMGIRASQTMELIFQDV---KVPKENLLG 226 Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 E KI + LD + ++ + +A+A + YA+ R G + + +A Sbjct: 227 KEGEGFKIAMSTLDGGRIGIAAQALGIAQAALDHAVKYAKERVQFGKPIASNQAIAFMLA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A +I AA L++R A + D+ + S+EA+ A++ + +A V +A++ G Sbjct: 287 DMATEIDAARLLTYRAAYAKDQGRPFSKEASMAKM-------YASDVAMRVTTDAVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY E + R R + I G+ Sbjct: 340 GYGYTREYPVERLMRNAKITQIYEGT 365 >gi|258648036|ref|ZP_05735505.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC 51259] gi|260851889|gb|EEX71758.1| acyl-CoA dehydrogenase family protein [Prevotella tannerae ATCC 51259] Length = 575 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 33/318 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSS 237 F E + P + + LTE G+D+ + + DG + L+G K F+++ Sbjct: 152 FGNEDQHSRFIPRVCEGATMSMDLTEPDAGSDLQRVMLKATYSEKDGCWLLNGVKRFITN 211 Query: 238 PMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 +D ++LA+ E G + + D G+ +R++NK+G + T EL + N Sbjct: 212 GDADIHLVLARSEEGTTDGRGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAHA 271 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILID 351 L GD + G ++ ++ ++ A + ++ V +++A + YA R G +I+ Sbjct: 272 ELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGISQAAYNEGLAYAADRQQFGKPIIE 327 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI-- 395 P + +A + + A AL ++ + D EA R E+ YA++ Sbjct: 328 FPAVYDMLALMKAKLDAGRALLYQCSRYVDLYKALEDISRERKLEADERKEQKEYAKLAD 387 Query: 396 -MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + P+ K + A ++++ GGSG++ + I R YR++ SI G+ V+ Sbjct: 388 SLTPLAKGINSEYANQNTYDSIQIHGGSGFMLDYPIQRFYRDARITSIYEGTTQLQVVAA 447 Query: 455 LNLLEKGTNL-----FEQ 467 + + G+ L FEQ Sbjct: 448 IRYVTNGSYLKQMRDFEQ 465 >gi|170740607|ref|YP_001769262.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168194881|gb|ACA16828.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 592 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 30/286 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D++ + ++ + DG Y + G K +++ ++D I L A Sbjct: 161 MNLTEPQAGSDLSGLRTKAEPAGDGTYRIRGEKIYITWGEHDLTDNIIHLVLARLPDAPA 220 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNV 304 G + FLVP++L DG N L L++K+G + T + E G+L+G+ N Sbjct: 221 GTRG-ISLFLVPKVLPDGRRNDLRCAGLEHKLGIHGSPTCTMVYGEGEGAVGWLVGEANR 279 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH---VSGGI-----LIDQPVMK 356 + M L + V + +A+ YAR R +GG +I P ++ Sbjct: 280 GLACMFTMMNNARLCVGLQGVGIAERATQQALAYARDRRQGRAAGGTEGMSPIIGHPDVQ 339 Query: 357 RAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCKMAPA 410 R + + A+ + + A + D A R E A ++ P+ K + + Sbjct: 340 RMLLTMKALTGASRGICYLTAEALDRAHRAPSEAERREALDRASLLTPVAKAFSTDIGIE 399 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 V + ++ GG G++EE A+H R++ +I G+ +D++ Sbjct: 400 VASLGIQVHGGMGFVEETGAAQHLRDARIAAIYEGTNGIQAIDLVT 445 >gi|222084817|ref|YP_002543346.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] gi|221722265|gb|ACM25421.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] Length = 598 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 88/344 (25%), Positives = 146/344 (42%), Gaps = 37/344 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206 H TSA+ ++LM P + + I S E T M + + + + LTE Sbjct: 110 HAAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSDEQKRTYLPKMVEGTWSGTMNLTEPH 169 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGC 255 GTD+ + ++ DG Y +SG K F+S+ M+D + +LA++EG + Sbjct: 170 CGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHDMTDNIVHLVLARIEGAPEGTKGISL 229 Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ + EDGS N + +++K+G NAT + + GFL+G N + Sbjct: 230 FIVPKFMVKEDGSLGARNPVSCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358 M L + +S ++ A YAR R +SG +I P ++R Sbjct: 290 VMMNEARLGVGLQGLSIAEIAYQNAAAYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRT 349 Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + I A + A TAL +A+ + K R + PI K Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRSQDEKERQAADDILGLATPILKGVLTDKGFDHA 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVG 453 >gi|313888931|ref|ZP_07822591.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845104|gb|EFR32505.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b] Length = 645 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE G+D ++ + DG Y L+G+K F++ +P +D +++ A +G Sbjct: 125 FGLTEPNAGSDAGG--TETTAVLDGDYYILNGNKIFITNAPAADTYVVYAVTTPGIGTHG 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + + + G + +K+G RS+ T EL+F+N + N+ + +I + Sbjct: 183 ISAFIVEKGWEGFTFGDHYDKLGIRSSTTAELQFNNV---KVPKENLLGKEGQGFRIAMQ 239 Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ + +A+ A+ YA+ R G + Q + IAD+A I AA Sbjct: 240 TLDGGRIGIASQALGIAQGAFEAALAYAKERVQFGRPIAQQQAVAFKIADMATKIRAARL 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + + A ++ S EAA A+ +A W V+ EA++ GG+GY++ + Sbjct: 300 MVYSAAEMKQNHENYSMEAAMAKTVASEVAMW-------VVNEALQIHGGNGYLKGMDVE 352 Query: 432 RHYRESPANSILLGS 446 R +R++ +I G+ Sbjct: 353 RFFRDAKITTIYEGT 367 >gi|300934074|ref|ZP_07149330.1| acyl-CoA dehydrogenase [Corynebacterium resistens DSM 45100] Length = 390 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 17/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGC 255 L +TE G D+A I S +K +G Y L+G K F+S+ + F ++ V GR G Sbjct: 131 LAMTEPGAGADLAGIRSFARKDENGDYILNGSKTFISNGVQADFTLVVAVTNPEAGRAGV 190 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 ++ ++EDG LK K+G +S T EL F + LLG+ + G + Sbjct: 191 SML--IIEDGMEGYTKTGPLK-KVGLKSQDTAELSFEDVRIPKENLLGEEGAAFGYLRTN 247 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ S++ R + +++ R G LID + +A +A I AA + Sbjct: 248 LAQERLSIAVGSIATSRRAFDLVYKHSQDRKTFGNRLIDHQAYRWELAKMATSIQAAQSF 307 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D A E + + KY ++ V+ A++ GG G++ E IA Sbjct: 308 -------VDAAIMEKVEGNLDEVTGAMAKYHTTELQIEVVNTALQLHGGYGFMMEYPIAT 360 Query: 433 HYRESPANSILLGSGNAMV 451 HY +S I G M+ Sbjct: 361 HYLDSRVQPIYGGPNEIMI 379 >gi|296137031|ref|YP_003644273.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295797153|gb|ADG31943.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 598 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/361 (23%), Positives = 148/361 (40%), Gaps = 48/361 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE GTD+ I ++ DG Y L+G K F+SS ++D I +LA++ G Sbjct: 167 LTEPHCGTDLGLIRTKAVPQDDGSYKLTGQKIFISSGEHDLTDNIIHMVLAKLPGAPEGS 226 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G NG+ +++K+G +N+T ++ + G+++G+ N Sbjct: 227 KGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPNKG 286 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + S+ V+ A+ YAR R ++G D+P Sbjct: 287 LAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILVHP 346 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + RA A+ +A +L + +A+ R + ++ PI K + Sbjct: 347 DVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFITDN 406 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 E ++ GG GYI E + + R++ N I G+ LD+L Sbjct: 407 GLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG----------- 455 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIA 526 + D G+ +K IL D I ++ + F+ LA L GM +A Sbjct: 456 --RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKAMA 513 Query: 527 D 527 D Sbjct: 514 D 514 >gi|255263408|ref|ZP_05342750.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62] gi|255105743|gb|EET48417.1| acyl-CoA dehydrogenase family protein [Thalassiobium sp. R2A62] Length = 592 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 90/358 (25%), Positives = 150/358 (41%), Gaps = 59/358 (16%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K + PK+ S E+ T + LTE GTD+ + ++ DG + +SG Sbjct: 146 KTYLPKLASCEWTGT-------------MNLTEPHCGTDLGLMRTKAVPQDDGSFQVSGQ 192 Query: 232 KWFLSS---PMSDAFI--MLAQVEG------RVGCFLVPRLL--EDGS---PNGLCYQRL 275 K F+S+ MSD I +LA++ G V F+VP+ L +DGS NG+ ++ Sbjct: 193 KIFISAGEHDMSDNIIHLVLAKIPGGPDGIKGVSLFIVPKFLVNDDGSVGARNGVSCGKI 252 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 + K+G N+T + + G+L+G+ + + M L + + + A Sbjct: 253 EEKMGIHGNSTCVMNYDEATGYLIGEEHKGMRAMFVMMNEARLGVGLQGYAAAEAAYQNA 312 Query: 336 IHYA----RRRHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 + YA + R V+G LI P ++R + + I A A ++ AN D A Sbjct: 313 VIYANDRLQGRAVTGTENPEGPADPLIVHPDIRRNLMEQKSFIEGARAFTYWGANLIDRA 372 Query: 384 -KSRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + R +A ++ PI K + A + GG GYIEE +++ R++ Sbjct: 373 HRMRDADADGLISLLTPIIKGFQTDKGFEYATAAQQVYGGHGYIEEWGMSQFARDARIAM 432 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 I G+ LD++ L QD GK V+ + KE+KG Sbjct: 433 IYEGANGVQALDLVG-------------RKLAQD---GGKHVMAFFEMVKTFIKENKG 474 >gi|323526936|ref|YP_004229089.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323383938|gb|ADX56029.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 596 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKQTYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + DG + + G K F++ D A ++LA+ EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSFRIFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNEDGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358 M I++ + + G+ VS A A + R + G +++ P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVGVSERAYQKAAAYAKERVQSRPIDGSAKQSVAIVEHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + A+ AL++ A DEAK R+E A + PI K W +++ V Sbjct: 348 LSTMRALTEASRALAYVAAAHSDIAHRHPDEAK-RAEHQAIYEFLVPIVKGWSTELSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|291300660|ref|YP_003511938.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290569880|gb|ADD42845.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 383 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 27/271 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256 LTE GG+D A+++++ + DG + + G K F++ + ++D + A+ G V C Sbjct: 127 LTEPSGGSDAASLSTKAVRDGDG-FVVEGTKAFITHAGVADFHSVFARTGGPGARGVSCL 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 ++P +G+P G+ QRL++K+G ++ T ++ F G +G + I + Sbjct: 186 VLP----EGTP-GVVPQRLEHKMGLSASPTAQIVFD---GARVGSDCLVGEEGRGFSIAM 237 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L++ + ++ V LA+A YAR R G +ID + +AD+A I+AA Sbjct: 238 AALNAGRLGIAACAVGLAQAACDYATQYARGRRQFGSPVIDFQGVGFMLADMATQISAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + R+ A K + +A V +A++ +GG GY+ + + Sbjct: 298 ALVSHAARLRDAGRG-------FRVAAAQAKLFATDVAMRVTTDAVQVLGGYGYVSDHPV 350 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R++RE+ I+ G+ L + L +G Sbjct: 351 ERYFREAKVLQIVEGTNQIQRLVISRALAQG 381 >gi|329902137|ref|ZP_08273041.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327548860|gb|EGF33488.1| Acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 596 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 52/327 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE + G+D+A + S+ DG + + G K +++ D ++LA+ E Sbjct: 161 MNLTEPQAGSDLAMVRSRAVPQDDGSFKVFGTKIYITYGEHDMAENIIHLVLARTPSAPE 220 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G G F+VP+ L + G+ N + +++K+G +++ T L+F + G L+G Sbjct: 221 GIKGISLFVVPKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------L 349 + N +E M +++ + + G+ V+ +A+ YA+ R S + + Sbjct: 281 EENRG---LEYMFVMMNAARFAVGLQGIGVADRAYQKAVRYAKDRVQSRDLAGSAGPVAI 337 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYW 403 I QP ++R + + I A+ ALS+ A + D A ++EA + M PI K W Sbjct: 338 IHQPDVRRMLMTMRSQIEASRALSYVTAAAHDAALYHTDEATRKANNLFYEFMVPIVKGW 397 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 +++ V + ++ GG G+IEE A++YR++ +I G+ + +L+ + T Sbjct: 398 STELSIDVASTGVQIHGGMGFIEETGAAQYYRDARILTIYEGT---TAIQANDLIGRKT- 453 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDS 490 +D G++ K +I +R S Sbjct: 454 ---------ARDGGANAKAIIAQVRHS 471 >gi|91215197|ref|ZP_01252169.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755] gi|91186802|gb|EAS73173.1| acyl-CoA dehydrogenase [Psychroflexus torquis ATCC 700755] Length = 388 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 21/260 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + + D + ++G K F+++ + SD I+ A+ G + Sbjct: 125 LCITEPYGGSDVAGMKTTAVEKED-TFVINGSKTFITNGVYSDYLIVAAKTAPEKGGKGM 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L D G+ +L NK+G R++ T EL F N L+G+ N + Sbjct: 184 SIFLVDRDTPGISATKL-NKLGWRASDTAELAFDNVEIPKSHLMGERNQGFPYIMQH--- 239 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ IM V+G +L AI Y R G + ++ IA+ + ++ A A Sbjct: 240 FALERLIMGVNGHARAEYALEYAIKYMSEREAFGQTIDKFQALRHKIAERSSEVEMAKAF 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A D + +EA +++++ K+A VI + ++ +GG GY+E+ +AR Sbjct: 300 NYTTAKRLDAGEYVVKEATMSKLLS-------TKIADEVIYDCLQMLGGYGYVEDYPLAR 352 Query: 433 HYRESPANSILLGSGNAMVL 452 +R+S I G G + +L Sbjct: 353 MFRDSRLGPI--GGGTSEIL 370 >gi|78059987|ref|YP_366562.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77964537|gb|ABB05918.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 596 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ + G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTMRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|330829883|ref|YP_004392835.1| acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565] gi|328805019|gb|AEB50218.1| Acyl-CoA dehydrogenase family member 8 [Aeromonas veronii B565] Length = 385 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 49/299 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIY 226 V K+W PK+ S E LG LTE G+D AA+ ++ + D Y Sbjct: 105 VAKEWVPKLASGEL----------------LGSYCLTEPGAGSDAAALKTRAVREGD-CY 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 + G K F+S + SD +++A+ G + F+VP + G+ Y + + K+G Sbjct: 148 LIEGTKVFISGAGSSDVLVVMARTGGEGAKGISAFMVP-----ANAPGVSYGKAEEKMGW 202 Query: 282 RSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 S T E+ F+ + LG+ + ++ +I I A SV + +L + Sbjct: 203 NSQPTREVVFNGVRIPASYRLGEEGEGFKFAMQALDGGRINI----ATCSVGTAQQALDD 258 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA 393 A+ Y ++R G + + ++ +AD+A ++AAA L + A+ D A +S A A Sbjct: 259 ALAYVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAADKLDRGAPDKSAWCAMA 318 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + A Y C EA++ GG GYI E + R+ R++ + IL G+ M L Sbjct: 319 KRFATDVGYRICD-------EALQLFGGYGYIREYPLERYLRDTRVHRILEGTNEVMRL 370 >gi|218781220|ref|YP_002432538.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762604|gb|ACL05070.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 604 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 56/344 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ DG Y ++G+K F++ +++ I +LA++EG Sbjct: 164 LTEPEAGSDVGALTTTAVPNEDGSYSITGNKIFITVGDHDLTENIIHAVLARIEGAPAGT 223 Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 V F+VP R+ EDGS PN + L+ K+G +AT + + GFLLG+ Sbjct: 224 AGVSLFIVPKIRVNEDGSLGIPNDVICTGLEEKMGIHGSATCSMALGSKGQCQGFLLGEA 283 Query: 303 NVSTGPVEDMKILIYL-DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID----- 351 N + M+ + ++ + A ++VS + +A A +YA+ R V G L D Sbjct: 284 N------KGMRAMFHMMNEARLAVSMQSLGIASTAYLHAANYAKER-VQGRDLSDMLNKD 336 Query: 352 --------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMA 397 P ++R + + + + + +A+ ++ ++ + + R ++ Sbjct: 337 AVSVPIVRHPDVRRMLTWMKAYVDGMRSFVYFIADCIEKEENSQDIEEHKRCKGLVDLLT 396 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 PI K + K V +A++ GG GYI E + + R++ S+ G+ +D+L Sbjct: 397 PIIKTYNAKYGFEVCVQAIQTYGGYGYIREYPVEQLLRDAKITSLYEGTDGVQAMDLLAR 456 Query: 458 ---LEKGTNLFEQLFSTLEQDLGSSGKK-VITILRDSISLCKED 497 +E+G +F+ + + + K + + D++ C +D Sbjct: 457 KIGMEQGA-VFQSFIKEINNVIDRARKSDALASMADAVDQCLKD 499 >gi|148554752|ref|YP_001262334.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148499942|gb|ABQ68196.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 385 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV 249 M + V L +TE RGG+D+ AI+++ D Y L+G K F+++ ++D I+ A+ Sbjct: 122 MARGEVIGSLAMTEPRGGSDLRAISTRAMAFGDH-YILNGAKTFITNGYITDLIIVAAKT 180 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 E G + L + G+ +K+G ++ EL F + G LLG Sbjct: 181 EQDDGTTGLSLFLVEADRAGVSKSMPLDKVGQKAQDAAELFFDDVHVPKGNLLG--RQGE 238 Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M+ L + L AI +V+G V+L + Y + R++ G LID + +A+ Sbjct: 239 GLHYLMQELAWERLMIAIRAVAGCEVALETTVDYVKSRNMFGKSLIDFQNTRFKLAECKT 298 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A + + K +E +A A K+WC ++ V+ E ++ GG GY Sbjct: 299 KTQIARVYIDKCIELACDGKLDAEASAMA-------KWWCTELQNRVLDECVQFHGGYGY 351 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR + ++ A I G+ M Sbjct: 352 MLEYPVARAWTDARAQMIYGGTNEIM 377 >gi|103487255|ref|YP_616816.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98977332|gb|ABF53483.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 580 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 164/380 (43%), Gaps = 71/380 (18%) Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T ++ ALM T + W PK+ + E++ T + LTE G+D+ A Sbjct: 128 LTPGAIHALMAYGTEEQRQTWLPKLITGEWNGT-------------MNLTEPAAGSDVGA 174 Query: 214 ITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 + S +K+++G +Y + G K F++ D ++LA+ G + FLV Sbjct: 175 LRSTAEKVTEGEHAGLYRIKGQKIFITFGEHDLTDNIVHLVLARTPGAPEGTRGISLFLV 234 Query: 259 P--RLLEDGSP---NGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 P RL DG+P NG+ +++K+G + T + E + G ++G+ G + Sbjct: 235 PKYRLDADGNPTISNGVHCASIEHKLGIHGSPTAVMVYGEDEDCLGEIVGE---EMGGMR 291 Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVSG--------GILIDQ-PVMKRA 358 M +++ ++ G+++ ++ +A +A R S + ID+ P +KR Sbjct: 292 AMFVMMNNARLMIGCQGIQIGERAMQQAQRFAAERVQSALAGSPDRTPVTIDKHPDVKRM 351 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAA-YARIMAPITKYWCCKMAPAVIAEAME 417 + + AA AL + A D K E AA A ++ P+ K + V + ++ Sbjct: 352 LWRMRAQTEAARALVYYAAAQTDFGKLGDEAAASRADVLIPLAKAHATDIGCEVASLGIQ 411 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG G+IEE A+HYR++ I G+ D++ + LG Sbjct: 412 VHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAADLVG-----------------RKLG 454 Query: 478 SSGKKVITILRDSISLCKED 497 +G ++ L D I+ D Sbjct: 455 MAGGDLVRALIDDIARGAAD 474 >gi|254483050|ref|ZP_05096285.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214036735|gb|EEB77407.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 601 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 36/302 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P + A + ++E G+ ++ +T+ DG Y +SG+K ++S + + Sbjct: 152 PQRSGRFAGTMAMSEPGAGSSLSDLTTTAIPQQDGTYRISGNKIWISGGDHELTENIVHL 211 Query: 245 MLAQVEGRV------GCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292 +LA+V+G V F+VP+ + +DGS N + L +K+G R + L F Sbjct: 212 VLARVKGAVKGVKGISLFIVPKFMVNDDGSLGERNDVTLAGLFHKMGGRGQTSTALNFGE 271 Query: 293 --NTFGFLLGDLNVST----GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 G+L+G+ N + + +I++ +AI++++G + SL A + R S Sbjct: 272 KEGAVGYLVGEENRGLMYMFHMMNEARIMVGSGAAIIALAGYQYSLDYAKERPQGRLPSA 331 Query: 347 GILIDQPVMKRAIADIALDIAAATALS----------FRLANSFDEAKSRSEEAAYARIM 396 + PV AD+ + A A S LA+ A ++ E AA ++ Sbjct: 332 KDPLAPPVNIIEHADVKRMLLAQKAYSEGAYALCLFGTMLADDEHTAHTQEERAAAHELL 391 Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 P+ K W + P + A++ +GG+GY+ E + YR++ N I G+ LD Sbjct: 392 DFLTPVIKSWPSEYGPKANSMAIQVLGGAGYVNEHPVEMMYRDNRLNPIHEGTTGIQSLD 451 Query: 454 VL 455 +L Sbjct: 452 LL 453 >gi|111024069|ref|YP_707041.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110823599|gb|ABG98883.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 389 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ +G + +TE G+D+ IT+Q + G Y ++G K Sbjct: 119 WLPKLTSGEW--------------VGAIAMTEPSAGSDLQNITTQAVR-DGGDYVITGAK 163 Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 F+S+ + D I+ A+ + G G LV + D +P G ++ +K+G + T E Sbjct: 164 TFISNGRNCDLVIIAAKTDATLGAKGVSLVVAEVNDDTP-GFSRGQIFDKLGQKGQDTTE 222 Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343 L F + LLG+ G V+ M+ L L + +V+ + ++A I Y + R Sbjct: 223 LFFDGLRVSVDNLLGERE-GAGFVQLMQQLPQERLICGVAAVAAIERAVALTIEYTKSRT 281 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402 + G L D + + ++A AL+ R++ +F D+ + A + KY Sbjct: 282 MFGKTLFD-------LQNTRFELAECAALA-RVSRTFIDDCIDKHLRGELDVTTAAMAKY 333 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W AVI ++ GG GYI E IA+ Y ++ I GS M Sbjct: 334 WLTDQQCAVIDRCLQLFGGYGYILEYPIAQMYADARIQRIYAGSNEVM 381 >gi|301632163|ref|XP_002945160.1| PREDICTED: acyl-CoA dehydrogenase-like [Xenopus (Silurana) tropicalis] Length = 385 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 33/279 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W P++ + E + LTE G+D AA+ + K D Y Sbjct: 102 TPEQQAQWLPRLATGE-------------IMASFALTEPEAGSDAAALRTSAIKKGDE-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F++ +P + F ++A+ + G G V + D G+ + + K+G R Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTDPGDKGAGGVSAFIVDAQSPGISFGKNDKKMGQRGA 207 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIH 337 T ++ F N L+G L G MK+L I++ A ++V R L +A+ Sbjct: 208 HTCDVIFDNVRVPAANLIG-LQEGQGFKTAMKVLEKGRIHI--AAVAVGCARRILRDALA 264 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G + D +++ +AD ++ AA ++ A DE + + EA+ Sbjct: 265 YALERQQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDEGRDVAIEAS------ 318 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 TK + +M V A++ +GG+GY+ E I R YR+ Sbjct: 319 -CTKMFTTEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356 >gi|225012640|ref|ZP_03703075.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium MS024-2A] gi|225003173|gb|EEG41148.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium MS024-2A] Length = 387 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 135/265 (50%), Gaps = 27/265 (10%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR 252 + V+IG GLTE G+D +++ +K D + L+G K F++ +S A ++ G Sbjct: 123 SGVSIGAWGLTEHNTGSDAKGMSTTAKKDGDN-WILNGTKNFITHGISGAIAVVIARSGE 181 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VST 306 G + ++E G+P G + +NK+G R++ T E+ F N ++ D N + Sbjct: 182 KGDNRGMTAFVVERGTP-GFTSGKKENKLGMRASETAEMVFDNC---IIPDQNRLGPIGD 237 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 G ++ MKI LD +S++ + + +A+ ++ Y++ R G + + IAD Sbjct: 238 GFIQSMKI---LDGGRISIAALSLGVAKGAFNASLKYSKERKQFGRPISSFQGISFKIAD 294 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I AA L+ + + ++ K+ +++ A A++ A C K+A EA++ GG Sbjct: 295 MATEIEAAVLLTEKASELKNQGKNVTQQGAMAKLFASEV---CVKVA----NEAVQIHGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G+ ++ + + +R+S +I G+ Sbjct: 348 YGFTKDFPVEKFFRDSKLCTIGEGT 372 >gi|218749864|ref|NP_001136342.1| short-chain acyl-CoA dehydrogenase [Nasonia vitripennis] Length = 402 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 17/270 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ + G Y L+G K W + ++ ++ A + + Sbjct: 143 LSEPGNGSDAGAASTTAKTSGSGGYLLNGTKCWITNGYEAEGIVVFATTDKAKKHKGISA 202 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + D GL + ++K+G R ++T L F + + + N+ P KI ++ LD Sbjct: 203 FIVDKPTPGLSLGKKEDKLGIRGSSTCSLIFEDC---KVPEENLLGEPGMGFKIAMMTLD 259 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ + +A+A + YA +R G + ++ +AD+A+ + A+ L++ Sbjct: 260 AGRIGIASQALGIAQASLDCAVEYATKRTAFGNAIAKLQAIQMKLADMAMRVEASRLLTW 319 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D K ++EAA A++ A +C +A++ +GG GY+ + RHY Sbjct: 320 RAAYLKDNGKPYTKEAAMAKLSASEAATFCSH-------QAIQILGGMGYVTDMPAERHY 372 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNL 464 R++ I G+ L + L K NL Sbjct: 373 RDARITEIYEGTSEIQRLVIAGNLLKEYNL 402 >gi|163739914|ref|ZP_02147320.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107] gi|161386788|gb|EDQ11151.1| enoyl-CoA hydratase [Phaeobacter gallaeciensis BS107] Length = 592 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 85/355 (23%), Positives = 162/355 (45%), Gaps = 47/355 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246 PM + + LTE + G+D+ + + ++ DG + ++G K F++ +S+ I L Sbjct: 157 PMITGQWSGTMNLTEPQAGSDLGRVRCKAERCDDGSFAITGTKIFITYGEHDLSENIIHL 216 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 A +G + F+VP+ + DGS N + +++K+G R++ T LEF Sbjct: 217 VLARTPDAPAGPKG-LSLFIVPKYMVQNDGSLGARNAVNCVSIEHKMGVRASPTAVLEFD 275 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRH----VS 345 GFL+G+ N +E M +++ + V G+ VS L A+ +A+ R V Sbjct: 276 AAKGFLVGEENRG---LEYMFVMMTSARFSVGVQGVAVSERALQHALAFAQERQQGRPVD 332 Query: 346 G----GILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPI 399 G + I+Q P ++R + + + AL+ A D A S E+A A A + P+ Sbjct: 333 GSTKDAVSINQHPDVRRMLLRMRGMVEGGRALALATAGWLDLAHSGDEQANAMAEFLVPL 392 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K C + + V + ++ GG G+IEE +A+ R++ I G+ D+L Sbjct: 393 VKGNCSERSVEVTSLGLQIHGGMGFIEETGVAQLCRDARILPIYEGTTAIQANDLLG--- 449 Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 + +D G + ++ ++ ++ D +R + E+++ A +A Sbjct: 450 ----------RKVLRDGGETARRFSALIAETEDQLNSDCPQSRMIAERLSQARTA 494 >gi|149926650|ref|ZP_01914910.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105] gi|149824579|gb|EDM83795.1| Acyl-CoA dehydrogenase [Limnobacter sp. MED105] Length = 596 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV-EGRVGC 255 LTE GTD+ + S+ + +DG Y ++G K F+SS D ++LA++ + VG Sbjct: 167 LTEPHCGTDLGMLRSKAEPQADGSYKITGAKIFISSGEHDMAENIIHLVLARLPDAPVGT 226 Query: 256 -----FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 FLVP+ + + G N + +++K+G NAT ++ G+L+G + Sbjct: 227 KGISLFLVPKFIPNADGSIGERNPIFCGAIEHKMGIHGNATCQMNLDGATGWLIGQPHRG 286 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + S+ V+ A+ YA+ R ++G D+P Sbjct: 287 LAAMFVMMNAARLGVGMQSLGLTEVAYQNAVVYAKDRIQGRSLTGPKSADKPADSILVHP 346 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + RA A+ + TAL S + R E + + PI K + Sbjct: 347 DVRKMLLTTRAYAEGGRALCMWTALELDKELSHPDEAVRKEASEMVALATPIVKAFITDN 406 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + M+ GG GYI E + ++ R+S N I G+ LD+L Sbjct: 407 AWEATSHCMQVYGGHGYIAEWGMEQYVRDSRINMIYEGTNTIQSLDLLG 455 >gi|113970269|ref|YP_734062.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-4] gi|113884953|gb|ABI39005.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4] Length = 585 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 41/326 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK++S E+ A + +TE + G+D+ I ++ DG Y Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274 +SG K F++ D ++LA++ G FLVP+ + G NG+ Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVTVGS 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT + F G+L+G+ N + M L I + + + Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310 Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 A YA+ R+ +GG +I ++R + I A ALS D A Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLMTIRAMTEAGRALSVFTGKQLDLA 370 Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 K +E A Y ++ P+ K + A + GG GYI E I + R++ Sbjct: 371 KYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464 I G+ +D L G NL Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|257483067|ref|ZP_05637108.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 592 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA+++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYKITGSKIFITGGEHDLTENIIHLVLAKLQDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352 + M L I + SG+R S A+ YA+ R S +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|256822625|ref|YP_003146588.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796164|gb|ACV26820.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM 16069] Length = 565 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 35/310 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE G+D+ + ++ + DG Y LSG K F++ M+D I L A Sbjct: 164 LTEAHAGSDLGILKTKAEPQEDGTYKLSGSKIFITGGEHDMTDNIIHLVLARLPDAPAGP 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ + +DGS NG+ +++K+G ++++T + + GF++G + Sbjct: 224 KG-ISLFLVPKFMVNDDGSLGERNGIRCGSIEHKMGIKASSTCVINMDDATGFIIGGPHQ 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGILIDQPVMK-----R 357 + M L L + V +S +A YA R + + G+ P+++ R Sbjct: 283 GLRCMFTMMNLERLSIGLQGVGLGEMSYQQAFDYANDRLQGRAEGVEGTAPIIRHGDVQR 342 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAV 411 + + A AL+ L DEA +EA ++ ++ P+ K + + V Sbjct: 343 MLKTMQAYTQAGRALAVWLGAWLDEAFHSEDEAVVSKAQNMAALLTPVAKAFFTDIGYEV 402 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468 + GG GY+ E + +H R++ I G+ LD++ + KG L E L Sbjct: 403 CTIGQQVFGGHGYVREWGMEQHVRDARIAQIYEGTNGIQALDLIGRKIVSNKGAFLSE-L 461 Query: 469 FSTLEQDLGS 478 + + D+ S Sbjct: 462 LTDMRDDMQS 471 >gi|326329425|ref|ZP_08195749.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325952751|gb|EGD44767.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 377 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 27/313 (8%) Query: 151 LMSPSVTSASMVALMT----TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 +MS +S + L T P + K +P + PT IG L +TE Sbjct: 69 MMSEGASSGLLAGLFTHGIALPHIAKHGSPHLIETYVKPTLAGEK------IGSLAITEP 122 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDG 265 GG+D++ + + + D + ++G K F++S + F+ A G G + L+ D Sbjct: 123 DGGSDVSHLRTTAVRDGDE-FVVNGAKTFITSGVRADFVTTAVRTGGPGAGGISLLVIDK 181 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 G R K+G + + T EL F + G L+GD N + + + + A+ Sbjct: 182 DTPGFTVTRKLEKMGWKCSDTAELAFEDVRVPAGNLVGDENAGFIYIAEAFVTERIALAV 241 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 LA Y R+R G LI + V++ + ++ + A A + + +D Sbjct: 242 QGYGTAARCLALTADYCRQRETFGEPLIKRQVVRHKLVEMHRQVEVAKAYTHAVVARYDR 301 Query: 383 AKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 S + EAA A+ A W V+ +A++ GG+GY+ + RHYR+ A Sbjct: 302 EGSTQQTIAEAALAKQTAVEACTW-------VVDQAVQLHGGTGYMHGTEVERHYRD--A 352 Query: 440 NSILLGSGNAMVL 452 + +G G V+ Sbjct: 353 RILPIGGGATEVM 365 >gi|222479743|ref|YP_002565980.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452645|gb|ACM56910.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 384 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 127/260 (48%), Gaps = 23/260 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML----AQVEGR 252 +G ++E + G+D+ ++ ++ +K D + ++G K W + ++D F+++ +++ R Sbjct: 120 MGSAISEPQAGSDVTSVATRAEKDGDE-WVINGSKMWITNGTVADYFVVVCETDPEIDDR 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVED 311 + ++L +G +GL ++ K+G R++ T EL F + + D N + + Sbjct: 179 YSGY--SQILVEGDRDGLTRDKITGKLGIRASDTAELRFDDV---RVPDENLIGQRGMGF 233 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++++ + D +V+ V +A A+ YA R + D +K +A++ + Sbjct: 234 LQLMQFFDETRTAVAAQGVGIARGAAERALEYAEEREQFDRPISDFQAIKHKLAEMHTNT 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++R A + D E+ +A + K + + A V EA++ GG+GY+ Sbjct: 294 EAARWLTYRSAWAVDN------ESGDLTALASMAKEFASRTAVEVANEAVQVHGGAGYVN 347 Query: 427 ERSIARHYRESPANSILLGS 446 + + R YR++ I G+ Sbjct: 348 DHDVERLYRDAKITQIYEGT 367 >gi|116751348|ref|YP_848035.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700412|gb|ABK19600.1| butyryl-CoA dehydrogenase [Syntrophobacter fumaroxidans MPOB] Length = 400 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 36/277 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K + LTE GTD+AA ++ + DG Y L+G K F+S +P++ FI+ A Sbjct: 134 PLCKGQILGSFALTEPGAGTDVAAGSTTA--VLDGDSYVLNGTKMFISNAPVAGVFIIFA 191 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + G F+VP +G+ NK+G R T E+ N G LL Sbjct: 192 STDKSKGPKGLSAFIVP-----ADTSGIKPGEHLNKMGIRGALTSEVVLKNCRIPKGNLL 246 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353 G G + KI ++ LD + ++ + +A E+IHY++ R G + Sbjct: 247 G------GEGQGFKIAMMTLDGGRIGIAAQALGIAQAALDESIHYSKERVQFGKPISSFQ 300 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+A ++ A+ L++ A +D+ S+EAA A++ A T A Sbjct: 301 AIQWMLADMATEVEASRFLTYHAAWCYDQGLPYSKEAAMAKLHAAET-------AARQTN 353 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A++ GG G+I+ + R YR++ I G+ M Sbjct: 354 RAIQIHGGIGFIKGHKVERLYRDAKITEIYEGTSEVM 390 >gi|91225743|ref|ZP_01260772.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] gi|91189632|gb|EAS75907.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] Length = 384 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 22/302 (7%) Query: 160 SMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITS 216 S A MT +H W F+ + T P T +G LTE G+D A++ + Sbjct: 82 STTAFMT---IHNMVSWMIASFATDEAKTQFCPKLVTGEWLGSYCLTEPNAGSDAASLAT 138 Query: 217 QGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275 K D Y L+G K F+S + +D +++A+ G G V + +G+ Y R Sbjct: 139 TASKKGD-TYVLNGGKTFISGAGETDVLVVMART-GEAGAKGVSAFVIPAHADGISYGRK 196 Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRV 330 + K+G S T + F N LLG+ G V MK L ++ A SV + Sbjct: 197 EPKMGWNSQPTRAVTFENVVIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQ 254 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L A Y + R G L ++ +AD+A ++ AA L A+ D ++ + Sbjct: 255 ALERAARYIQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLD--RNDPDAT 312 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 AY + K + + V +A++ GG GYI+E + RH+R+ + IL G+ M Sbjct: 313 AYC----AMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTNEIM 368 Query: 451 VL 452 L Sbjct: 369 RL 370 >gi|237796728|ref|YP_002864280.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4 str. 657] gi|229261133|gb|ACQ52166.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4 str. 657] Length = 377 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 27/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG++N Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RA 358 G + MK L + A ++ + ++ EA+ YA++R ++P+ K Sbjct: 228 KGFITAMKTLSVGRIGVASQAIGIAQAAVDEAVKYAKQRK-----QFNRPIAKFQGIQFK 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ + AA L + A D + +EA+ A KY+ + A ++ +A++ Sbjct: 283 LADMETKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAEAAIQIVNDALQI 335 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459 GG GYI++ I R YR+ +I G+ + + NLL+ Sbjct: 336 HGGYGYIKDYKIERLYRDVRVIAIYEGTSQVQQMVIASNLLK 377 >gi|54020956|ref|NP_001005724.1| acyl-CoA dehydrogenase, short/branched chain [Xenopus (Silurana) tropicalis] gi|49523138|gb|AAH75324.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus (Silurana) tropicalis] Length = 361 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 32/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ + QK D Y ++G K W +S + F+++A G C Sbjct: 105 LSEAESGSDAFSLRTSAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 163 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+VP+ E G + ++K+G R+++T L F N +LG L M Sbjct: 164 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESNILGQLGHGYKYAIGM 218 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ + +S + LA+ I Y ++R G + D M+ I+ +A + Sbjct: 219 -----LNEGRIGISAQMLGLAQGCFDHTIPYTKQRVQFGKRIFDFQGMQHQISHVATQLE 273 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L++ A + + +EA A KY+ ++A ++ +E +GG GY ++ Sbjct: 274 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFSSEVACLTTSKCIEWMGGVGYTKD 326 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 I ++YR++ +I G+ N + + L+E Sbjct: 327 YPIEKYYRDAKIGTIYEGTSNIQLSTIAKLIE 358 >gi|170723989|ref|YP_001751677.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169761992|gb|ACA75308.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 592 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 36/342 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNDDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + M L I ++ S A+ YAR R + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATAERSYQNAVEYARDRLQSRAPTGPQAKEKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + I A S +A D AK E R ++ P+ K + + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEEPGTRKRSEELVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G + Sbjct: 406 GLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYY 465 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507 + + Q + S+G + ++ + + GL ++ E+ Sbjct: 466 KLFSEEIRQFIASAGGDLDEFVKPLGAYLDQLDGLTEWVLEQ 507 >gi|89092144|ref|ZP_01165099.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92] gi|89083879|gb|EAR63096.1| acyl-CoA dehydrogenase, putative [Oceanospirillum sp. MED92] Length = 595 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 35/297 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ + ++ + DG Y +SG K F+S+ D I+LA++ EG Sbjct: 165 LTEPHCGTDLGMLRTKAEPQEDGSYKISGTKIFISAGEHDMADNIVHIVLARLPDAPEGT 224 Query: 253 VGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G F+VP+ L + G NG+ L++K+G NAT + F N G+L+G N Sbjct: 225 KGISLFIVPKHLPETLGEDNGVSCGSLEHKMGIHGNATCVMNFDNATGYLIGPANKGLNC 284 Query: 309 VEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQP---------VM 355 + L +A+ ++ G + SL A + R ++G D+P V Sbjct: 285 MFTFMNTARLGTALQGLAHAEWGFQNSLVYAKDRLQMRALTGPARPDKPADPIIVHPEVR 344 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYAR----IMAPITKYWCCKMAPA 410 K + A AL + A D+ K + EE A A + PI K + ++ Sbjct: 345 KMLLTQKAF-AEGGRALIYYCAQLVDKVKLAEGEEKAQADALLAFLTPIAKAFLTEVGFE 403 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G +L Sbjct: 404 SANHGLQIFGGHGFIAEWGMEQNVRDSRISMLYEGTTQIQALDLLGRKVLMTQGESL 460 >gi|325523272|gb|EGD01632.1| Acyl-CoA dehydrogenase [Burkholderia sp. TJI49] Length = 596 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 59/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +A+ A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVADRAYRKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R + + A AL++ A D A S+EA AR + P+ K W +M Sbjct: 346 RMLGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVND 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 406 VASLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|192289455|ref|YP_001990060.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283204|gb|ACE99584.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 593 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 99/457 (21%), Positives = 189/457 (41%), Gaps = 60/457 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114 G+Y TAQ L + + L G++ KV P W +R I G Sbjct: 29 FGDYDSEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + F A ++ + + G + P +T +++ AL T + + + Sbjct: 89 WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDALKQ 146 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + K+ S E+ T MQ LTE + G+D+ A+ ++ ++ +DG Y + G K Sbjct: 147 VYLGKLISGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAADGSYRIFGSK 193 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275 F++ M+D + A +G + FLVP+ L + G+ N + + Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVNADGTLGARNDIYPSGV 252 Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 ++K+G ++ T + + G+L+G+ N + M L + V + Sbjct: 253 EHKLGIHASPTCTMTMGDHGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312 Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAA------TALSFRLA 377 +A+ YA+ R + +I P +KR + + I AA TA++ +A Sbjct: 313 QQALAYAQERKQGRAVGSAGPGSDPIIKHPDVKRTLLTMRALIGAARTICYSTAVALDIA 372 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K ++ A ++ PI K + + V + ++ GG G+IEE A+HYR++ Sbjct: 373 ARSTDPKVKASATARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 I G+ +D++ + G N +F+ L++ Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGANGGASVFALLDE 468 >gi|320333820|ref|YP_004170531.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755109|gb|ADV66866.1| acyl-CoA dehydrogenase domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 599 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 95/387 (24%), Positives = 164/387 (42%), Gaps = 56/387 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + L+E G+ +A IT+ DG Y ++G K ++S +S+ + +LA+ G Sbjct: 161 MALSEPHAGSGLADITTLATPRDDGTYTVAGTKMWISGGEHELSENILHLVLARTPGAPP 220 Query: 253 ----VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296 + FLVPR + +DG + N + L +K+G R L F G Sbjct: 221 GVKGISLFLVPRYRVTDDGRAGASNHVVLAGLNHKLGYRGTTNTLLNFGEGGDSLGELVG 280 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L G LN + + +I + L + ++ V+G + SLA A + R S PV Sbjct: 281 TLGGGLNAMFHMMNEARIGVGLGATMLGVAGYQYSLAYARERTQGRAASTRDPSSPPVPI 340 Query: 357 RAIADI-------ALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403 A AD+ + A AL A D+ ++ R+ ++ P+ K W Sbjct: 341 IAHADVRRMLLAQKATVEGALALGLYAARLVDDERTADTPEERATATLLLDLLTPLAKAW 400 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461 + A++ +GG+GY + + + +R++ N I G+ LD+L + G Sbjct: 401 PSSHVQTALDHALQILGGAGYTRDHPVEQLWRDNRLNPIHEGTNGIQGLDLLGRKVTAHG 460 Query: 462 TNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520 + L + QDL ++ G + ++RD++ + AL +SA AL +A Sbjct: 461 GRSLQLLAQAVTQDLAAAEGLPDVQVIRDAV---------------RHALTTSAQAL-QA 504 Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHG 547 + D+ +RFL N S ML G Sbjct: 505 ILTQAPDLG-PDRFLANADSALEMLGG 530 >gi|114047542|ref|YP_738092.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-7] gi|113888984|gb|ABI43035.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7] Length = 585 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 41/326 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK++S E+ A + +TE + G+D+ I ++ DG Y Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274 +SG K F++ D ++LA++ G FLVP+ + G NG+ Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVTVGS 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT + F G+L+G+ N + M L I + + + Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310 Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 A YA+ R+ +GG +I ++R + I A ALS D A Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLA 370 Query: 384 KSRSEE-----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 K +E A Y ++ P+ K + A + GG GYI E I + R++ Sbjct: 371 KYAEDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464 I G+ +D L G NL Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|262376517|ref|ZP_06069746.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308656|gb|EEY89790.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 593 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 56/376 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK ++ E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 151 YLPKFYTGEWSGT-------------MCLTEPHSGTDLGIIKTKAEPNEDGSYNITGTKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F++S D ++LA+ + F+VP+ L + G N + +++ Sbjct: 198 FITSGEHDLSENIIHLVLAKTPNAPAGSRGISLFIVPKFLVNADGSVGERNAVSAGSIEH 257 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G + +AT + F G+++G+ N + M L I + + A Sbjct: 258 KMGIKGSATCVMNFDGAKGYMVGNENEGLAGMFVMMNYERLSMGIQGIGAAEFAYQNAAQ 317 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R +G ++P ++R + ++ + A+ A + + D K Sbjct: 318 YATDRLQGRASTGAKSPEKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKY 377 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A + ++ PI K + A EA C GG GYI E + + R+ Sbjct: 378 STDPEAVRKATDRVALLTPIAKAYLTDKALDSALEAQMCFGGHGYIREWGMEQCIRDLRI 437 Query: 440 NSILLGSGNAMVLDVLNLLE---KGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLC 494 + I G+ +D++ GT + E + E Q+L S +TI ++ C Sbjct: 438 SQIYEGTNGVQAIDLIGRKTTKCNGTYIAEYIAEIREFAQNLDDS----LTIKTATLEAC 493 Query: 495 KEDKGLARFLTEKIAL 510 ++ + + +F+ E+ L Sbjct: 494 QQLEDITKFIVEQSKL 509 >gi|296804532|ref|XP_002843118.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480] gi|238845720|gb|EEQ35382.1| glutaryl-CoA dehydrogenase [Arthroderma otae CBS 113480] Length = 425 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 27/246 (10%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ T++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 163 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 222 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 ++ R + P L +KNK R++ T ++ N + +++ GP Sbjct: 223 VIER--DQCPPGTLSTPAIKNKTALRASITGMIQMDNCPVPEANMFPEVSGLVGP----- 275 Query: 314 ILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIA 367 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D A Sbjct: 276 -FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDAA 334 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 T + ++A DE K+ E M + K C A A E GG+ +E Sbjct: 335 YGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGARTLQEIFGGNAASDE 387 Query: 428 RSIARH 433 I RH Sbjct: 388 YHIGRH 393 >gi|301096828|ref|XP_002897510.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Phytophthora infestans T30-4] gi|262106970|gb|EEY65022.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Phytophthora infestans T30-4] Length = 413 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 28/276 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ + G Y L+G K W ++ +D I+ A + + Sbjct: 151 FGLSEPGNGSDAGAASTTARSTDKG-YVLNGTKAWITNAHDADQAIVFATTDKSLKHKGI 209 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP G + ++K+G R+++T L F + + N+ + K Sbjct: 210 SAFLVPT-----DAPGFSLGKKEDKLGIRASSTGNLIFEDV---EVPKENLLGKEGDGFK 261 Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I +I LDS + ++ + +A+A I YA+ R G + P+++ ++ +A +I Sbjct: 262 IAMITLDSGRIGIASQALGIAQASYDCAIAYAQTRKTFGVPIAKNPIIQTKLSTMATEIE 321 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L+++ A D + ++ AA A++ A C +A++ +GG GY+ E Sbjct: 322 AARLLAWKAAVEKDAGRPFTKLAAMAKLKASEAATMCSH-------QAIQVLGGMGYVFE 374 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 RHYR++ I G+ M L + L K N Sbjct: 375 MPAERHYRDARITEIYEGTSEIMHLVIGGALNKEFN 410 >gi|242010283|ref|XP_002425898.1| Short/branched chain specific acyl-CoA dehydrogenase, putative [Pediculus humanus corporis] gi|212509874|gb|EEB13160.1| Short/branched chain specific acyl-CoA dehydrogenase, putative [Pediculus humanus corporis] Length = 338 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 33/282 (11%) Query: 195 SVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE 250 SVAI +G LTE G+D A+ + ++ D + L+G K W +S ++ FI+ A + Sbjct: 71 SVAILVGSFCLTEPYSGSDAFAMKTSAKQEGD-YFILNGSKMWISNSDIAKFFIVFANAD 129 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGDLN 303 G + L + GL + +NK+G R++ T ++ F N G L Sbjct: 130 SSKGYRGITTFLVERDAPGLSVGKKENKLGIRASGTCQVNFDNVKIHKSAVLGELYQGYK 189 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + G +L+ + + V+ + LA+ I Y R G + D M+ Sbjct: 190 YAAG---------FLNESRIGVAAQMLGLAQGCFDVTIPYTLERKQFGHKIFDFQAMQHQ 240 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IADIA+ + + L + + + S ++EA+ A K++ +MA V ++ Sbjct: 241 IADIAVKLECSRLLVYNASRRVEAGISFAKEASMA-------KFYVTEMAHEVTKRCIDW 293 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 IGG G+ ++ + YR+ +I G+ N + + L+K Sbjct: 294 IGGVGFTKDFPQEKFYRDCKIGTIYEGTSNIQLNTIAKFLKK 335 >gi|239827224|ref|YP_002949848.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] gi|239807517|gb|ACS24582.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] Length = 380 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAEYARQVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V G+ G ++ ++ G + +K+G R++ T EL F N + NV Sbjct: 171 VTGKDERGKNIISAIIVPTDTPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P + K +Y LD +S++ + V +A+A + YA+ R G + ++ +A Sbjct: 228 DPKKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++I A + ++ A D+ K ++EA++A++ A + C +A++ G Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GY++E + RH R+ Sbjct: 341 GYGYMKEYGVERHLRD 356 >gi|218778066|ref|YP_002429384.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759450|gb|ACL01916.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 604 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 51/298 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252 LTE G+D+ +++ +K DG Y ++G+K F++ +++ I +LA++EG Sbjct: 164 LTEAEAGSDVGNLSTTARKNDDGTYSITGNKIFITYGEHDLTENIIHPVLARIEGAPAGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F+VP++ +DGS PN + ++ K+G +++T L F G+LLG+ Sbjct: 224 AGISIFIVPKIWVNDDGSLGEPNDVVCTGIEEKMGIHASSTCSLAFGGKGQCRGYLLGEE 283 Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL------- 349 N + MK++ L+ S V+ A +YA+ R + G L Sbjct: 284 N------KGMKVMFLMMNEARLNVGFQGFSAASVAYMYACNYAKER-IQGRALEDSANKD 336 Query: 350 ------IDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIM---A 397 I+ P ++R + + + + +A+ FD+ A+S E + +++ Sbjct: 337 AKPVAIINHPDVRRNLLTMKAYTDGMRSFIYYVADLFDKEELAESPEEADRFNKLIQLYT 396 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K +C + + ++ GG GYI E + + R++ SI G+ +D++ Sbjct: 397 PVIKAYCTDKGFELASTGIQVYGGYGYISEYPMEQILRDAKIGSIYEGTNGIQAMDLI 454 >gi|187776796|ref|ZP_02993269.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC 15579] gi|187775455|gb|EDU39257.1| hypothetical protein CLOSPO_00312 [Clostridium sporogenes ATCC 15579] Length = 377 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 16/263 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG+LN Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELN-- 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + MK L + A ++ + ++ EA+ YA++R + ++ +A++ Sbjct: 228 KGFITAMKTLSVGRIGVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANME 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L + A D + +EA+ A KY+ + A ++ +A++ GG G Sbjct: 288 TKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGGYG 340 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI++ I R YR+ +I G+ Sbjct: 341 YIKDYKIERLYRDVRVIAIYEGT 363 >gi|323366578|gb|ADX43863.1| CarC [Acetobacterium woodii] Length = 352 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + LTE G+D +++ + D Y L+G K F++ +P+ D ++ A+ Sbjct: 85 PIITGKKKLAFALTEPGAGSDAGGMSTTAVDMGD-YYLLNGRKTFITMAPLCDDAVIYAK 143 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301 + G + + D G+ + ++K+G AT V++ N G Sbjct: 144 TDMSKGTRGISAFIVDLKSEGVSMGKNEHKMGLIGCATSDIIMEDVKVPKENRLG----- 198 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 V+ G MK L L A S+ + +L EAI YA+ R G + D + I Sbjct: 199 -EVNKGFSNAMKTLDVGRLGVASQSIGVAQGALDEAIKYAKERKQFGKRIADFQAIAFMI 257 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + AA L + A+ D K+ ++EA+ A K++ ++ + A+A++ Sbjct: 258 ADMATKLEAAKLLVYNAASLMDNKKNATKEASMA-------KFYASEICNEICAKAVQIH 310 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GYI+E + R YR+ +I G+ + + +L K Sbjct: 311 GGYGYIKEYKVERMYRDCRVFTIYEGTSQVQQMVISGMLLK 351 >gi|212638028|ref|YP_002314548.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212559508|gb|ACJ32563.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 380 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 31/261 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D A +Q + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGEAFGSFGLTEPNAGSD--AGGTQTRAVLDGDEYVINGEKCWITNAGYARQVIVTA 170 Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 V G+ + F+VP G +K+G R++ T EL + + Sbjct: 171 VTGKDERGKNIISAFIVPT-----DAPGFTINCHYDKMGVRASNTCELVLQDV---RVPK 222 Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355 N+ P + K +Y LD +S++ + V +A+A + YA+ R G + + Sbjct: 223 ENILGDPKKGFKQFLYTLDGGRISIAALAVGIAQAAFEKALQYAKERKQFGQPIAKFQAI 282 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+A+ + A + ++ A D+ K ++EAA+A++ A T + C +A Sbjct: 283 QFKLADMAMQLELARNMVYKAAWLKDQGKPFTKEAAFAKLFASETGFHICN-------QA 335 Query: 416 MECIGGSGYIEERSIARHYRE 436 ++ GG GY++E + RH R+ Sbjct: 336 IQIHGGYGYMKEYGVERHLRD 356 >gi|332373428|gb|AEE61855.1| unknown [Dendroctonus ponderosae] Length = 416 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 37/297 (12%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +H +F + + K P T + LTE GTD A+ + +K+ D Y Sbjct: 123 IHNTLVNSVFFKYANEAQKEKYLPKLATEMVGSFALTEPSSGTDAFALKTTAKKVGDE-Y 181 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 L+G K W +S S F+++A + G CF+V R +P G R +NK+G Sbjct: 182 VLNGSKMWISNSDFSGVFLVMANADTSKGYKGISCFIVDR----DTP-GFTINRPENKLG 236 Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA- 335 ++ T L F + LLG++ + KI I L+ + ++ + LA+ Sbjct: 237 IVASGTCMLTFEDVKIPTSHLLGEIG------QGYKIAIDILNEGRIGIAAQMLGLAQGC 290 Query: 336 ----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 I Y R G + + M+ IA+IA +I AA L++ A ++ +EA+ Sbjct: 291 FDATIPYTLERQQFGQPIFNFQAMQHQIAEIATEIEAARLLTYNAARLLEQKVPYIKEAS 350 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A++ + ++A + ++ +GG G+ ++ + YR+ SI G+ N Sbjct: 351 MAKL-------YASEVAQRTTIKCIDWMGGVGFTKDFPQEKFYRDCKIGSIYEGTSN 400 >gi|321468573|gb|EFX79557.1| hypothetical protein DAPPUDRAFT_304439 [Daphnia pulex] Length = 406 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ +DG + L+G K W + S+A ++ A + + Sbjct: 147 LSEPGNGSDAGAASTTAVTSADGGWTLNGTKAWITNGYESEATVVFATTDKSLKHKGISA 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+VP+ GL + ++K+G R ++T L F + + N+ P KI Sbjct: 207 FVVPK-----PTPGLSLGKKEDKLGIRGSSTCNLIFEDCH---IAKDNLLGKPGLGFKIA 258 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + + +A + YA +R G + ++ IAD+AL + +A Sbjct: 259 MSILDGGRIGIAAQALGIGQAALDCAVDYASKRKAFGQPITKLQSIQNKIADMALQLESA 318 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R A DE ++ +EAA A++ A + A + +A++ +GG GY+ + Sbjct: 319 RLLTWRAAALQDEGRAFIKEAAMAKLAA-------SEAATFISHQAIQILGGMGYVSDMP 371 Query: 430 IARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 372 AERHYRDARITEIYEGT 388 >gi|311742051|ref|ZP_07715861.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311314544|gb|EFQ84451.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 384 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 9/259 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LG+TE GG+D+A I ++ + D Y ++G K F++S + F+ G G + Sbjct: 125 LGVTEPGGGSDVANIRTKAVR-DDDHYVVNGAKTFITSGVRADFVTTVVRTGGEGYGGIS 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ D G K+G + T EL F + L+G+ N V + Sbjct: 184 LLVIDKDAPGFTVTGPLRKMGWHCSDTAELSFEDVRVPAENLVGEENGGFVLVMQQFVNE 243 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A+ + + + + A+ YAR+R G LI + V++ + D+ AAA AL+ + Sbjct: 244 RLGLAVQAYATAQRATDLAVEYARQRETFGKPLITRQVIRHKLVDMQRRTAAARALTRQA 303 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + + ++A K + V+ EA++ GG GY+ E I RHYR+ Sbjct: 304 VERSIDGSTTDPSIILDAVLA---KNTAVEAVEHVVTEAVQIFGGMGYMRESEIDRHYRD 360 Query: 437 SPANSILLGSGNAMVLDVL 455 A I +G G VL+ L Sbjct: 361 --ARIIGIGGGATEVLNDL 377 >gi|86139041|ref|ZP_01057612.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] gi|85824272|gb|EAQ44476.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] Length = 567 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 34/301 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A++S+ DG Y ++G K ++ Sbjct: 150 PKLISGEWTGT-------------MNLTEPQAGSDVGALSSKAVPNGDGTYAVTGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQ----VEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 S +D ++LA+ V G G FLVP+ + + G+ N L L++K+ Sbjct: 197 SWGDNDFAENVCHLVLARLPDGVPGTKGISLFLVPKYIPNADGSLGAANSLGVVSLEHKM 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G + T ++F G+L+G + + M L V + +A YA Sbjct: 257 GLHGSPTCVMQFDGAKGWLVGAEHAGMAAMFTMMNNARLGVGGQGVGVAEGAFQKATAYA 316 Query: 340 RRR---HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR 394 R G + D ++R + ++ D A+ A+ A++ D A ++ A A Sbjct: 317 LERKQGKTPSGSIADHADVRRMLMEMKADTYASRAIMLACAHAIDMGNATDEADWKARAA 376 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + PI+K + + ++ GG G+IEE A+ R+ SI G+ +D+ Sbjct: 377 FLTPISKAFGTDTGIRIADMGIQVHGGMGFIEETGAAQFLRDVRVTSIYEGTNGIQAMDL 436 Query: 455 L 455 + Sbjct: 437 V 437 >gi|307546535|ref|YP_003899014.1| acyl-CoA dehydrogenase [Halomonas elongata DSM 2581] gi|307218559|emb|CBV43829.1| probable acyl-CoA dehydrogenase [Halomonas elongata DSM 2581] Length = 595 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 63/361 (17%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P + A AL+ + W KI S E+ T + LTE + G+ Sbjct: 125 MLPQLNVAQAEALLFAASEAQKATWLEKIVSGEWTAT-------------MNLTEPQAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+AA + + G Y L G K ++S + ++LA++ EG G FLV Sbjct: 172 DLAATRMRAEPDESGNYRLHGQKIYISYGEHELTPNILHLVLARLPDAPEGVKGLSLFLV 231 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L E G N + +++K+G + T L + + G L+G+ P Sbjct: 232 PKYLLDERGEPGEKNDVRCISIEHKMGIHGSPTCTLSYGDHDGAIGQLIGE------PHT 285 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGI---LIDQPVMK 356 +K + I ++ A V ++L E A+ +AR R VSG + ++ P +K Sbjct: 286 GLKTMFIMMNEARFGVGVQGLALGERAYQAALDHARERVQGRNVVSGEMGLPILHHPDVK 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSE-EAA-----YARIMAPITKYWCCKMAPA 410 R + + + A + A FD A+ + E A + ++ P+ K WC ++ A Sbjct: 346 RMLVGMRARLLAMRTFLYTAAGWFDLARHHPDAEVADKHRRHVDLLMPVAKGWCSELGNA 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQ 467 + EA++ GG G++EE +A+ +R++ +I G+ D+L L + G L E Sbjct: 406 LCDEAIQVFGGMGFVEETGVAQLFRDARIITIYEGTTGIQANDLLGRKILHDNGATLREL 465 Query: 468 L 468 L Sbjct: 466 L 466 >gi|221065119|ref|ZP_03541224.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220710142|gb|EED65510.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 587 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 83/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%) Query: 202 LTEKRGGTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252 LTE G+D+ + +Q G + +SG K F+S D ++LA++ G Sbjct: 164 LTEAHAGSDLGQVRTQAVPAGASELGERFEISGSKIFISGGEHDLSANIVHLVLARLPGA 223 Query: 253 ------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + FLVP+LL G NG+ +R++ K+G + T + F G+L+G Sbjct: 224 PAGPRGLSLFLVPKLLPGGERNGVVCERIEEKMGLHGSPTCVMRFEAAQGWLIGQPGAGL 283 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------------ILID 351 + M L A+ + + + +A YA RR+ + G ++I+ Sbjct: 284 NAMFVMMNAARLHVALQGMGLLDAAWQKAHAYALERRQMRAPGAVPASRGAGDAADLIIE 343 Query: 352 QPV------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++RA D +A T + +A + A+ R + + ++ PI K Sbjct: 344 HPAIRRTLDLQRAWVDGGRVLAYQTGIYLDVARHAESAREREQAQQWCSLITPILKSAWT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 + A + ++ GG GYI E I + R+S I G+ +D+L +L G Sbjct: 404 QQAFEGASACLQVFGGHGYIREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGQ 463 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISL----------CKEDKGLA 501 Q L + L + +LR L CKED LA Sbjct: 464 AMGQWLLGLRKSLDAGRALDAEVLRCLAQLRYFTTVLAQACKEDDTLA 511 >gi|209519037|ref|ZP_03267845.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209500549|gb|EEA00597.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 595 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 47/323 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + + PK+ + + T + LTE GTD+ + ++ + DG Y Sbjct: 144 TPELQQRYLPKLVAGVWTGT-------------MCLTEPHCGTDLGILRTKAEPNGDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGL 270 +SG K F+SS D ++LA++ +G G F+VP+ + E G NG+ Sbjct: 191 SISGTKIFISSGEHDLAENIIHLVLARLPDAPKGTKGISLFIVPKFVPNEAGEPGERNGV 250 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G N+T + N G+++G+ N + M L + S+ V Sbjct: 251 KCGSIEHKMGIHGNSTCVINLDNANGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEV 310 Query: 331 SLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ YA+ R + +I P ++R + A A ++ A Sbjct: 311 AYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEAGRAFTYWSAL 370 Query: 379 SFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ S R E A ++ PI K + A AM+ GG G+I E + + Sbjct: 371 QIDKELSHADEAERKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGHGFIAEWGMEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 + R++ N I G+ LD+L Sbjct: 431 YVRDARINMIYEGTNGIQSLDLL 453 >gi|328854905|gb|EGG04035.1| hypothetical protein MELLADRAFT_49293 [Melampsora larici-populina 98AG31] Length = 426 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P TS L+E G+D A+ ++ K S+G Y ++G K W +S ++ F++ A Sbjct: 157 PKLATSKVACFCLSEPSSGSDAFALKTKVTKDSNGNYVVNGSKMWITNSKEAEIFVVFAN 216 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 ++ + G CFLV + + G+ + + K+G ++++T L F N ++ N Sbjct: 217 LDPQKGYKGICCFLVEKEM------GVQVAKKEQKLGIKASSTCTLNFDNV---VVPKEN 267 Query: 304 VSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 + + K I L+ + ++ + LA+ ++ Y +R G + + M+ Sbjct: 268 LIGEEGKGYKYAIEILNEGRIGIAAQMIGLAQGAFDKSVSYTYQREQFGRPIGEFQGMQF 327 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 ADI +I AA L++ A +E+K +E MA + K + ++A A+E Sbjct: 328 QFADIQTEIEAARLLTYNAARLKEESKPFTE-------MAAMAKLFSSEVAQRASGSAIE 380 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 GG G+ E I +++R+S +I G+ N Sbjct: 381 WCGGVGFTRETGIEKYWRDSKIGAIYEGTSN 411 >gi|119718773|ref|YP_925738.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119539434|gb|ABL84051.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 386 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 29/318 (9%) Query: 145 QLEAGHLMSPSVTSASMVALMTT----PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 +L+ G + +S M L T P + +P + R PT +K L Sbjct: 76 ELQEG-MFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPTLAG--EKIGA---L 129 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFL 257 G+TE GG+D+A I + ++ D +Y ++G K F++S + F+ A +G G L Sbjct: 130 GVTEPGGGSDVAGIRTTARREGD-VYVVNGAKTFITSGVRGDFVTTAVRTGPDGHAGLSL 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + ++E G+P G R K+G + T EL F + L+G+ N + + + Sbjct: 189 L--VIEKGAP-GFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYIAEQFV 245 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L A+ + SL Y R R G LI V++ + ++ + A A + Sbjct: 246 VERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVARAYAR 305 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A +S E A K C A V +A++ GG+GY+ + RHY Sbjct: 306 EVARRHAAGESVIAEVCLA-------KQTACDAATYVCDQAVQLHGGTGYMHGTEVERHY 358 Query: 435 RESPANSILLGSGNAMVL 452 R+ A + +G G VL Sbjct: 359 RD--ARILPIGGGATEVL 374 >gi|327482498|gb|AEA85808.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 619 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 77/342 (22%), Positives = 142/342 (41%), Gaps = 51/342 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M L TP + + K+ S ++ T + LTE GT Sbjct: 144 MYPGLSHGAMNTLHAHGTPEQQQTYLTKLVSGQWTGT-------------MCLTEPHCGT 190 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 191 DLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMAENIVHIVLARLPDAPAGTKGISLFIV 250 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L E G NG+ +++K+G NAT + F GFL+G N + Sbjct: 251 PKFLPNAEGEAGERNGVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKGLNCMFTFM 310 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ I YAR R + +I P ++R + Sbjct: 311 NTARLGTALQGLAHAEVAFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 370 Query: 362 IALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + A+ + A S DE + ++ +A A + PI K + ++ Sbjct: 371 MKAFAEGNRAMLYFAAKQVDVMQRSQDEEQRKAADAMLA-FLTPIAKAFMTEVGFEAANH 429 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 430 GVQIYGGHGFIAEWGMEQNVRDSRISCLYEGTTGIQALDLLG 471 >gi|256374678|ref|YP_003098338.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255918981|gb|ACU34492.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 381 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 40/306 (13%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +S V S+ + TP W P E + G L+E G+D Sbjct: 90 LSVHVMSSYALVNFGTPEQRAKWLPDALGGE-------------LLGGYALSESHAGSDA 136 Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCFLVPRLLEDGS 266 AA++++ + D Y + G K W ++D + ++A+ GR V CF P G Sbjct: 137 AALSTRAVREGD-EYVVRGTKAWITHGGVADFYTLMARTGEPGGRGVSCFFAP-----GE 190 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSV 325 +GL + K+G + T +L F G G + + M+I L LDS + + Sbjct: 191 LDGLSAAAPERKMGLTGSVTAQLTFD---GARFGADRLIGAEGDGMRIALSALDSGRLGI 247 Query: 326 SGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V LA EA+ YAR R G +I+ ++ +AD+A + +A A Sbjct: 248 AACAVGLAQAALDEAVAYARGRSQFGRPIIEFQGLEFLLADMAAAVDSARA------TYL 301 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A+ R + R A + K C A V +A++ +GG+GY + + R+ RE+ Sbjct: 302 DAARRRDRGLPFTR-QAAVAKLVCTDAAMKVTTDAVQVLGGAGYTRDFPVERYMREAKVL 360 Query: 441 SILLGS 446 I G+ Sbjct: 361 QIFEGT 366 >gi|24374306|ref|NP_718349.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] gi|24348850|gb|AAN55793.1|AE015716_3 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] Length = 596 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 94/371 (25%), Positives = 161/371 (43%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + A+ + + + + PK+ S E+ T + LTE GT Sbjct: 125 MYPGLTHGAYSAIHAHGSEALKQKYLPKLVSGEWTGT-------------MNLTESHAGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258 D+A + ++ +DG + ++G K F+SS P +D + +LA++ EG G F V Sbjct: 172 DLALLRTKAVPAADGYFAITGEKIFISSGDHPFTDNIVHLVLARLPDAPEGVKGISLFAV 231 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P++L DGS N L L++K+G N+T + F G L+G+ + + M Sbjct: 232 PKVLVNSDGSLGQANSLYASGLEHKMGIHGNSTCVMVFDGALGELVGEPHQGLRAMFTMM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILIDQPVMKRAIA 360 L + + ++ A+ YA+ R +SG IL+ V + ++ Sbjct: 292 NQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRMLLS 351 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAE 414 A + A AL + A DEA+ S+ A A + P+ K + + Sbjct: 352 QKAFN-EGARALVGQQALWLDEAERHSDPAKAKAASQLAALFTPVVKGFITNRGFNACVD 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFST 471 A + GG GYI E + + R+S I G+ LD++ L ++G + Q +ST Sbjct: 411 AQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAM--QQWST 468 Query: 472 LEQD-LGSSGK 481 L + + S GK Sbjct: 469 LVTEFIQSQGK 479 >gi|330505038|ref|YP_004381907.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328919324|gb|AEB60155.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 590 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 34/311 (10%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S E T PM + A + LTE GTD+ I ++ + +DG Y ++G K F++ Sbjct: 144 SEELKTTYLPPMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYKVTGSKIFITGGE 203 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D ++LA++ + FLVP+++ + G+ N + +++K+G ++ Sbjct: 204 QDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNADGSLGARNAVSCGSIEHKMGIKA 263 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342 +AT + F G+L+G++N + M L I + S A+ YAR R Sbjct: 264 SATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAVSYARERI 323 Query: 343 ------------HVSGGILIDQPVMKRAIADIALD-----IAAATALSFRLANSFDEAKS 385 V+ I++ V + + AL+ A LA ++A Sbjct: 324 QSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACYVGQQLDLAKYAEDASE 383 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 R A ++ P+ K + + GG GYI E + R+ I G Sbjct: 384 RQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEG 443 Query: 446 SGNAMVLDVLN 456 + LD+L Sbjct: 444 TNGIQALDLLG 454 >gi|262374894|ref|ZP_06068128.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262309907|gb|EEY91036.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 600 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 47/324 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE G+D+ I ++ + +DG Y +SG K Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPQADGSYAISGEKI 197 Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQRLKN 277 F+S+ D I+LA++ G + F+VP+ L DGS NG+ +++ Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNLNADGSIGERNGVRCGSIEH 257 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + F N GFL+G N + + +A+ ++ S A+ Sbjct: 258 KMGIHGNATCVINFDNAKGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASEGSFQGALA 317 Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA+ R +SG +I P ++ + AL + LA D + Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAYAEGGRALVYLLAQYADVVEH 377 Query: 386 RSEEA--AYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +EEA +A ++ PI K + + ++ GG G+I E + + R++ Sbjct: 378 AAEEADRKFADNILSLLTPIAKAFLTETGSEAAKHGVQVFGGHGFISEHGMEQIVRDTRI 437 Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463 + G+ LD+L GT Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461 >gi|300692097|ref|YP_003753092.1| Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum PSI07] gi|299079157|emb|CBJ51825.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum PSI07] Length = 594 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 77/325 (23%), Positives = 149/325 (45%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG Y L G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTYRLFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + D G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFMVDEDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + A +A A + + + +R + + + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADEPTRQQNESLYEFLVPVVKGWSTEMSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|293610792|ref|ZP_06693092.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827136|gb|EFF85501.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123637|gb|ADY83160.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 607 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/344 (20%), Positives = 148/344 (43%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++S M ++ T + + PK+ + T + LTE + GT Sbjct: 126 MYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPQADGSYKITGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFMPTADGGVGERNTVACGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKDPDKVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + + ++A+ +A +R ++AA+ PI K + ++ Sbjct: 353 QKAIAEGGRSMIYYAAQIADKMTDALARGDQAAFEDYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI+E + + R++ ++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLIG 456 >gi|329906036|ref|ZP_08274337.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327547368|gb|EGF32198.1| acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 596 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 52/336 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ T + LTE GTD+ + S+ + +DG + Sbjct: 145 TPEQKALYLPKLVSGEWTGT-------------MCLTESHCGTDLGMLRSKAEPQADGSF 191 Query: 227 CLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNG 269 +SG K F+S+ MS+ + L A +G + F+VP+ L + G+ N Sbjct: 192 KISGGKIFISAGEHDMSENIVHLVLARLPDAPAGTKG-ISLFIVPKFLPNADGSVGARNP 250 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 + ++ K+G N+T ++ G+++G N + M L + S+ Sbjct: 251 IFCGAIEEKMGIHGNSTCQMNMDEATGWIIGQPNKGLNAMFVMMNAARLGVGMQSLGLTE 310 Query: 330 VSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 V+ A+ YA+ R + +I P ++R + A S +A Sbjct: 311 VAFQNALVYAKDRLQMRSLTGVKAPEKAADPIIVHPDVRRMLLTAKAYAEGGRAFSSYVA 370 Query: 378 NSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 D + + R + A ++ PI K + +EAM+ GG G+I E + Sbjct: 371 LQIDKELNHPDEEVRKDAADEVALLTPIIKSFLTDNGWIATSEAMQVYGGHGFIAEWGME 430 Query: 432 RHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ R+S N I G+ LD+L L++ G L Sbjct: 431 QYVRDSRINMIYEGTNTIQSLDLLGRKVLMDNGAKL 466 >gi|197099871|ref|NP_001124722.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Pongo abelii] gi|75062038|sp|Q5RF40|ACDSB_PONAB RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SBCAD; AltName: Full=2-methyl branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD; AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase; Short=2-methylbutyryl-CoA dehydrogenase; Flags: Precursor gi|55725671|emb|CAH89617.1| hypothetical protein [Pongo abelii] Length = 432 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + L D GL + +NK+G R+++T L F N + + N+ Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPETNILGQIG 280 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 K I L+ + ++ + LA+ I Y + R G L D ++ +A +A Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG G Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y ++ + +++R++ +I G+ N Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418 >gi|312140886|ref|YP_004008222.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311890225|emb|CBH49543.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length = 380 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E + G+D AA++ + ++ DG + ++G K W + +D + + A+ +G G CF Sbjct: 127 LSEPQAGSDAAALSCRATEV-DGGFRINGSKAWITNGGRADFYTLFARTSDDGARGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVP+ E GL + + + K+G R+ T + + F L TG + + I Sbjct: 186 LVPKDTE-----GLGFGKPEEKMGLRAVPTTAAHYDDAF-VPTERLIGKTG--QGLPIAF 237 Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + V LA+ A+ YA+ R G +ID + +AD+A + +A Sbjct: 238 SALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A D A+ R Y+R A + K A V +A++ GG GY ++ + Sbjct: 298 ------ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPV 350 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 351 ERYMREAKITQIFEGT 366 >gi|294341208|emb|CAZ89609.1| Acyl-CoA dehydrogenase [Thiomonas sp. 3As] Length = 598 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 150/361 (41%), Gaps = 48/361 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252 LTE GTD+ I ++ +DG Y L+G K F+SS ++D I +LA++ EG Sbjct: 167 LTEPHCGTDLGLIRTKAVPQADGSYKLTGQKIFISSGEHDLADNIIHMVLAKLPDAPEGS 226 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + G NG+ +++K+G +N+T ++ + G+++G+ N Sbjct: 227 KGISLFIVPKFVPTADAGVGERNGIFCSGIEHKMGIHANSTCQMTLEDATGWMVGEPNKG 286 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + S+ V+ A+ YAR R ++G D+P Sbjct: 287 LAAMFVMMNGARLGVGMQSLGLTEVAYQNALAYARDRLQMRALTGPKAPDKPADPILVHP 346 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + RA A+ +A +L + +A+ R + ++ PI K + Sbjct: 347 DVRRMLLTARAWAEGGRFLAYWISLLLDQSLHHPDAEVRKDADDLVSLLTPIVKAFITDN 406 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 E ++ GG GYI E + + R++ N I G+ LD+L Sbjct: 407 GLQATNECLQVFGGHGYIREWGMEQFVRDARINLIYEGTNTIQSLDLLG----------- 455 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAAL-YRAGMNDIA 526 + D G+ +K IL D I ++ + F+ LA L GM +A Sbjct: 456 --RKVLMDGGARLRKFGKILTDFIEEEGVNEAMQEFVNPLADLADKVQKLTMELGMKAMA 513 Query: 527 D 527 D Sbjct: 514 D 514 >gi|30268183|emb|CAD38535.2| hypothetical protein [Homo sapiens] Length = 427 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 160 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 218 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + L D GL + +NK+G R+++T L F N + + N+ Sbjct: 219 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 275 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 K I L+ + ++ + LA+ I Y + R G L D ++ +A +A Sbjct: 276 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYVKERIQFGKRLFDFQGLQHQVAHVA 335 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG G Sbjct: 336 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 388 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y ++ + +++R++ +I G+ N Sbjct: 389 YTKDYPVEKYFRDAKIGTIYEGASN 413 >gi|154244575|ref|YP_001415533.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154158660|gb|ABS65876.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 585 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 44/333 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD+ + ++ DG Y ++G K F+SS D ++LA+ Sbjct: 163 MALTEASAGTDLGLLNTRAVPNGDGSYAITGTKIFISSGDQDFGGNVIHLVLARLPDAPK 222 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FL P+ L DGS NG+ L++K+G + T + + G+L+G+ Sbjct: 223 GVKG-ISLFLAPKFLVHADGSLGARNGVNVGALEHKMGIHAQPTCVMNYDGATGWLVGEP 281 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRR---HVSGGI-----LID 351 + M ++ + + + G+ ++ A +A+ YAR R H + G +I+ Sbjct: 282 GRG---LNAMFTMMNAERLFVGIQGLGIAEAANQKAVAYARERLQGHGADGTPGPVAIIN 338 Query: 352 QPVMK------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++ RA AD A +A TAL +A+ +A R E A ++ P+ K Sbjct: 339 HPDVRKMLLTGRAFADAARALAVWTALQMDIADRHPDATVRREADALVALLTPVVKAAFT 398 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 + + +GG GYI E + + R++ I G+ LD++ L +G Sbjct: 399 DFGFETAVASQQVLGGHGYIREWGMEQFVRDARIAQIYEGTNGVQALDLVGRKLGLEGGK 458 Query: 464 LFEQLFSTLEQDLG----SSGKKVITILRDSIS 492 L ++ F ++ DL S+G ++T + ++++ Sbjct: 459 LPQRFFDLIKADLDAALPSAGAALVTPVAEALA 491 >gi|70732970|ref|YP_262743.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68347269|gb|AAY94875.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 598 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 134/329 (40%), Gaps = 54/329 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ I ++ +DG Y ++G K F+S+ MS+ + L A Sbjct: 164 LTEAHCGTDLGIIKTRAVPQADGSYAVTGSKIFISAGEHDMSENIVHLVLAKLPDAPAGT 223 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L D G NG+ +++K+G +++AT L F GFL+G N Sbjct: 224 KG-ISLFIVPKFLPDAAGEAGERNGVSCGSIEHKMGIKASATCVLNFDGARGFLIGQANK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSG--------GILIDQ 352 + M L + + + S AI YA + R ++G +I Sbjct: 283 GLNCMFTMMNHARLGTGMQGLCLGETSFQGAIRYANDRLQMRSLTGPKSPDKAADPIIVH 342 Query: 353 PVMKRAIADIALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++R + + AL++ A S DEA+ + E A + PI K + Sbjct: 343 PDVRRMLLTMKAFNEGNRALAYFTAQLLDVAHLSRDEAQRQDAENLLA-FLTPICKAFMT 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 + V M+ GG G+I E + + R+ I G+ LD+L Sbjct: 402 ETGLEVTNHGMQVFGGHGFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLG--------- 452 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLC 494 + LGS GK ++ R C Sbjct: 453 -------RKVLGSQGKLLLGFTRIVHKFC 474 >gi|89269093|emb|CAJ81939.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Xenopus (Silurana) tropicalis] Length = 429 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 32/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ + QK D Y ++G K W +S + F+++A G C Sbjct: 173 LSEAESGSDAFSLRTSAQKHKD-YYIINGSKMWISNSEQAGVFLVMANANPSAGYKGITC 231 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+VP+ E G + ++K+G R+++T L F N +LG L M Sbjct: 232 FIVPKDTE-----GFHIGKKEDKLGLRASSTCSLTFDNVKVPESNILGQLGHGYKYAIGM 286 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ + +S + LA+ I Y ++R G + D M+ I+ +A + Sbjct: 287 -----LNEGRIGISAQMLGLAQGCFDHTIPYTKQRVQFGKRIFDFQGMQHQISHVATQLE 341 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L++ A + + +EA A KY+ ++A ++ +E +GG GY ++ Sbjct: 342 ATRLLTYNAARLKEAGRDFKKEACMA-------KYFSSEVACLTTSKCIEWMGGVGYTKD 394 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 I ++YR++ +I G+ N + + L+E Sbjct: 395 YPIEKYYRDAKIGTIYEGTSNIQLSTIAKLIE 426 >gi|163761301|ref|ZP_02168376.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] gi|162281458|gb|EDQ31754.1| acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] Length = 598 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 67/416 (16%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKR 206 H+ S++ ++ M P + + I D + K I G LTE Sbjct: 110 HVAVGEYMSSANLSFMMYPGLTQGAIAAIHEHGSDEQKAKYLPKMVEGIWTGTMNLTEPH 169 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGC 255 GTD+ + ++ DG Y +SG K F+S+ MSD I +LA++EG + Sbjct: 170 CGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHDMSDNIIHLVLARIEGAPEGVKGISL 229 Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ + +DGS N + L+ K+G NAT + + G+L+G N + Sbjct: 230 FIVPKFMVGDDGSLGDRNPVSCGSLEEKMGIHGNATCVMNYDEATGYLIGAENAGLKAMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358 M L + + ++ A+ YAR R +SG +I P ++R Sbjct: 290 VMMNEARLGVGLQGQAMGEIAYQNAVVYARERLQGRSLSGPKAPEKKADPIIVHPDVRRT 349 Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA--PA 410 + I A + A TAL +A+ + + E ++ P+ K A Sbjct: 350 LMTIRAFNEAGRAFMLWTALKSDIAHRSEVESEKQEADDLLTLVTPVVKGVLTDKGFDHA 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 V+A+ M GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 VMAQQM--FGGHGYIEEWGMSQYVRDARIAMIYEGANGIQALDLVG-------------- 453 Query: 471 TLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 + LG + G+ V+ ++ C+E++G E++AL + + G+ND+ Sbjct: 454 ---RKLGQNGGRAVMAFFKEIGDFCEENRG-----NEELALYTKG---LKKGLNDL 498 >gi|149915945|ref|ZP_01904469.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b] gi|149810268|gb|EDM70114.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. AzwK-3b] Length = 598 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 30/287 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE GTD+ I ++ + DG Y +SG K ++S+ D ++LA++ E Sbjct: 161 MNLTEPHCGTDLGLIRTKAEPAEDGTYRISGQKIWISAGEHDMCENIIHLVLAKLPDAPE 220 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP+ L EDGS N L L+ K+G NAT + + GFL+G+ + Sbjct: 221 GTKGISLFIVPKFLVNEDGSLGARNALSCGGLEQKMGIHGNATCVMNYDGATGFLVGEPH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV----- 354 + M L + + V+ A+ +A + R V+G D+P Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAQGEVAYQNALGFALDRLQGRDVTGTQAPDKPADPIIV 340 Query: 355 ---MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAP 409 ++R + D + A A +F A+ D + A +M P+ K + Sbjct: 341 HPDVRRNLMDQKAFVEGARAFTFWGASLLDAGHRAGDAQAEQMVSLMTPVIKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + +GGSG+ E + + R++ I G+ LD++ Sbjct: 401 ETTVLAQQTLGGSGFTREWGLEQFVRDARITMIYEGTNGIQALDLVG 447 >gi|87122133|ref|ZP_01078017.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121] gi|86162680|gb|EAQ63961.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121] Length = 705 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 79/344 (22%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ K A L +TE G+D+ I ++ K +G+Y + G K F+S+ M D A+I Sbjct: 175 PLAKNDFAACLCMTEPDAGSDVGNIRTKAVKQDNGLYRIEGEKIFISAGMHDLNDNIAYI 234 Query: 245 MLAQVEGR------VGCFLVPRLLEDGSP------------------------NGLCYQR 274 +LA+VEG + CF+VPR +G NG+ R Sbjct: 235 VLARVEGAKKGTVGLSCFVVPRYELEGEAKEATTPNHEERDSRLGSFIDSRLDNGVRCVR 294 Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDL-NVSTGPVEDMKILIYLDSAIMSVSGMRV 330 L+ K+G AT ++ F +G+LLG+ NV + M L + + I ++ Sbjct: 295 LEQKMGLHGCATAQISFGQAAPCYGYLLGERENVGLKQLMTMMNLARIATGIYALGMASS 354 Query: 331 SLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATA------ 371 + A YA R + G +I+ +KR + ++ + A Sbjct: 355 AYLNAAEYAGNR-IQGTSFKEAFNPRAQRVAIIEHIDVKRMLLEMKSKVEGCRALILKLC 413 Query: 372 --------LSFRLAN--SFD-----EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAV 411 L+ RLAN F+ E K + E AY ++ PI K + A V Sbjct: 414 MHQSQLMNLNIRLANPEQFEQSPTAEDKEKIEAQAYRHQSLVNLLTPIVKAYTSDQAFHV 473 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +++ GG GYI + + ++ R+ S+ G+ D+ Sbjct: 474 AETSIQVYGGHGYISDNPVEQYARDIKVMSLWEGTNFVQSADLF 517 >gi|21326612|gb|AAL03980.1| acyl-CoA dehydrogenase [Azospirillum brasilense] Length = 596 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 62/359 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE GTD+ I ++ DG + ++G K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGLIRTKAVPQEDGSHKITGTKIFISAGEHDLTENILHLVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS NG+ +++K+G +++AT + F + G+L+G+ Sbjct: 224 RGISLFLVPKFLPKEDGSVGPRNGVACGSIEHKMGIKASATCVMNFEDATGWLVGE---- 279 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQP-- 353 P + M+ + + +++A ++V + +AE A+ YA+ R + G D+P Sbjct: 280 --PHKGMRAMFVMMNAARLAVGIQGLGVAEVSYQNAVAYAKERLQGRSLKGTAHPDKPAD 337 Query: 354 ------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 + RA + A + A +A + K+R E + ++M PI K Sbjct: 338 PIIVHPDVRRNLLTARAYTEGARALGALVGYKLDVAEKHADEKTRKEADEFVQLMTPIVK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + A++ GG G+I E + ++ R++ I G+ LD++ Sbjct: 398 ALFTDIGFESANIAVQVHGGHGFIWETGVEQYVRDARICQIYEGTNGIQALDLVG----- 452 Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520 L QD+G ++ + I E + LA F+ + LA + A L +A Sbjct: 453 --------RKLPQDMGRLLRRFFHPVGAEIEADMEREELAEFV---LPLAKAFAKLQQA 500 >gi|300773910|ref|ZP_07083779.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300760081|gb|EFK56908.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 389 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 40/308 (12%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 SA ++ M+ P + K +A + + Y A ++VAI TE G+DI I + Sbjct: 88 SALVIQYMSAPYLLK-YASEELKQRYLTGVIAGDLVSAVAI----TEPGAGSDIQHIKTT 142 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y ++G K F+++ D FI + + + LL D + G+ ++ Sbjct: 143 AVREGD-YYIVNGSKTFITNGYYGDFFITAVKTDPSKKSKGISLLLIDRNTPGVSAHKI- 200 Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 NK+G ++ T EL F FG+L+G L + L +AI Sbjct: 201 NKMGWHASDTAELGFDQVKVPVSHLIGEEGAGFGYLMGGLQLER-----------LTAAI 249 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+S +L + Y +R G L+D V++ IA + DIA A + + Sbjct: 250 QSISTADSALQYTLAYIDKREAFGKKLMDFQVLRHRIAQMVADIATTKAFVYHCCD---- 305 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + YA I K ++A ++ E ++ GG G+ E+ I+R YR+ +I Sbjct: 306 ---LQQRGDYAVQECSIAKLQSSELAIKIVHECLQLFGGYGFTEDYKISRLYRDVRVGTI 362 Query: 443 LLGSGNAM 450 + G+ M Sbjct: 363 IGGTSEIM 370 >gi|260222964|emb|CBA33057.1| hypothetical protein Csp_B17130 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 824 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 44/277 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITWGEHDMAENIVHLVLARVSGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F+VP+ + +DGS N + +++K+G +++ T L++ + G+L+G Sbjct: 221 GVKGISLFVVPKFMVNKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILID 351 N +E M I +++A V +++AE A+ +++ R V G Sbjct: 281 QENRG---LEYM--FIMMNAARYGVGVQGIAIAERAYQKAVQFSKDRVQSRPVDGSTPGS 335 Query: 352 QPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 P++ RA + +A+ A ++ A+ +A++R + A+ M P+ Sbjct: 336 APIIHHPDVRRMLMTMRAYTEGCRALASVAASAYDAAHHHTDAEARKQNQAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 K + +M+ V + ++ GG G+IEE A++YR++ Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|302419223|ref|XP_003007442.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102] gi|261353093|gb|EEY15521.1| isovaleryl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102] Length = 435 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 20/256 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K+ DG Y ++G K W + P +D ++ A+ E G + Sbjct: 170 LAMSESGAGSDVVSMRTTAKKV-DGGYLINGSKMWITNGPDADVIVVYAKTEPDAGSKGI 228 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E + +G QR +K+G R + T EL F F +LG+LN G V + Sbjct: 229 TAFIVETKTSDGFSCQRKLDKMGMRGSNTGELSFDAVFVPDDRVLGNLN---GGVRVLME 285 Query: 315 LIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + L+ ++S M+ +L + +A +R G + +++ +AD+ + A+ A Sbjct: 286 GLDLERLVLSAGPLGIMQAALDVTLPFAHQRKQFGQPIAHNQLVQGKLADMYTKLQASRA 345 Query: 372 LSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ A + DEA + R+++ A A + + + A + ++ +GG GY+EE Sbjct: 346 YTYATARTVDEAGTIRTQDCAGAIL-------YAAERATECTLDCIQLLGGMGYVEEMPA 398 Query: 431 ARHYRESPANSILLGS 446 +R R++ I G+ Sbjct: 399 SRLLRDAKLYEIGAGT 414 >gi|146280706|ref|YP_001170859.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145568911|gb|ABP78017.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 596 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ + +DG Y +SG K F+S MS+ + L A V Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + LVP+ + DG+P N L +++K+G + AT + F G+++G+ N Sbjct: 222 KG-ISLLLVPKFIANADGTPGARNALSCGAIEHKMGIKGAATCVMNFDGATGWIVGEPNQ 280 Query: 305 STG----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------- 353 + D + + L ++ + SLA A + R ++G D+P Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARERLQSRGLAGAQRPDKPADPIIVH 340 Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + ++ + + + +AA A L + E R + A ++ PI K + Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEPSYRKAASKRAALLIPIVKAFFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M V + ++ GG GYI E + + R+S + G+ LD + Sbjct: 401 MGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449 >gi|89093403|ref|ZP_01166352.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] gi|89082382|gb|EAR61605.1| probable acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] Length = 590 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 57/353 (16%) Query: 149 GHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 G + P ++ ++ AL+ + + + P++ S E+ T + LTE Sbjct: 122 GFGLCPLLSQGAVEALIAHGSDELKTQYLPQLISGEWTGT-------------MNLTEPN 168 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVG 254 G+D+AA++++ D Y +SG K F++ M+ + L A V+G + Sbjct: 169 AGSDLAAVSAKAMPDGD-TYKISGQKIFITWGDHQMASNIVHLVLARLPDAPAGVKG-IS 226 Query: 255 CFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 F+VP+ L E G P N + L++K+G + T + F + G+L+G+ N Sbjct: 227 LFIVPKYLLDEQGQPGALNDVSCVSLEHKLGIHGSPTCVMSFGDNGGATGYLIGEPNKGL 286 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR------HVSGGILIDQPVM 355 + ++ A SV +S++E A+ Y++ R S +I+ P + Sbjct: 287 S-----YMFTMMNHARQSVGLQGLSISERAYQQALEYSQERLQGSNPDGSKIAIINHPDV 341 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +R + + A AL+ A D +E + PI K W ++A + + Sbjct: 342 RRMLMAMKSGNEAMRALALSAAADIDRTHHGDAESKTRVELYTPIVKGWMTELAQEITSL 401 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNL 464 ++ GG G+IEE A+HYR++ I G+ LD++ L +KG L Sbjct: 402 NIQVHGGMGFIEETGAAQHYRDARILPIYEGTTGIQALDLIGRKTLFDKGAAL 454 >gi|127512889|ref|YP_001094086.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella loihica PV-4] gi|126638184|gb|ABO23827.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4] Length = 583 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 34/295 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ DG Y +SG K F++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRNIRTKAIPQDDGSYLISGSKIFITGGDHDLTENVIHLVLAKLPDSNG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G NG+ +++K+G + +AT + F + G+L+G N G Sbjct: 224 ISLFLVPKIKVDDNGELGETNGVTVGSIEHKMGLKGSATCVMNFDDAQGYLIGKAN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRR---HVSGG-------ILIDQPV 354 V ++ Y AI + G+ S A A YA+ R +GG IL+ V Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERLQGQAAGGSDNASDPILVHGDV 340 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWCCKMAP 409 +R + I A ALS D AK E A Y ++ P+ K + Sbjct: 341 -RRMLMTIRCYTEAGRALSVFTGQQLDLAKHAEGEVQEKAARYVGLLTPVAKAFLSDRGL 399 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 A + GG GYI E I + R++ I G+ +D L G +L Sbjct: 400 DAAVMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAVDFLGRKTTGDDL 454 >gi|332978383|gb|EGK15105.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 597 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 52/339 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ G Sbjct: 164 LTEAHAGSDLGIIRTKAEPNDDGSYSITGQKIFISAGEHDMTDNIVHIVLARLPGAPAGT 223 Query: 253 --VGCFLVPRL--LEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP++ DGS PN + +++K+G +++AT + F GFL+G N Sbjct: 224 KGISLFIVPKINVNADGSLAEPNQVTCGSIEHKMGIKASATCVMNFDGAKGFLIGPENRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353 + + + +AI ++ ++ ++ YA+ R +SG D+ P Sbjct: 284 LQCMFTFMNVARIGTAIQGLTASEIAFQGSLEYAKDRLAMRSMSGAKAPDKVADPIIVHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA----RIMAPITKYWCCKMA 408 ++ + AL++ L+ D K EE YA ++ PI K + + Sbjct: 344 AVRNMLLTEKAFAEGGRALAYYLSFFADVVVKGTGEEQEYADQMLSLLTPIAKAFLTETG 403 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 ++ GG G+I E + ++ R++ + G+ LD+L Sbjct: 404 YESANHGVQVYGGHGFIREWGMEQNVRDTRIACLYEGTTEIQSLDLLG------------ 451 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKE---DKGLARFL 504 + LGS GK + + CKE D+ + F+ Sbjct: 452 ----RKVLGSQGKMLANFTKVINDFCKEHESDESMGEFI 486 >gi|117920429|ref|YP_869621.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. ANA-3] gi|117612761|gb|ABK48215.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3] Length = 585 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 41/326 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK++S E+ A + +TE + G+D+ I ++ DG Y Sbjct: 144 SEEIKETYLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAIPQDDGSY 190 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQR 274 +SG K F++ D ++LA++ G FLVP+ + G NG+ Sbjct: 191 AISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSLGQANGVSVGS 250 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 +++K+G + +AT + F G+L+G+ N + M L I + + + Sbjct: 251 IEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQM 310 Query: 335 AIHYARRRH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381 A YA+ R+ +GG +I ++R + I A ALS D Sbjct: 311 AADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLA 370 Query: 382 ---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 E + +++ A Y ++ P+ K + A + GG GYI E I + R++ Sbjct: 371 KYAEGEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGIEQLVRDTR 430 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNL 464 I G+ +D L G NL Sbjct: 431 IAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|86356210|ref|YP_468102.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86280312|gb|ABC89375.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 598 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 37/343 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206 H TSA+ ++LM P + + I ++E T M S + + LTE Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGTQEQKETYLPKMVDGSWSGTMNLTEPH 169 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255 GTD+ + ++ +DG Y +SG K F+S+ D ++LA++EG + Sbjct: 170 CGTDLGMLRTRAVPQADGSYKISGQKIFISAGEHDLTDNIVHLVLARIEGAPEGTKGISL 229 Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ L G+ N + +++K+G NAT + + GFL+G N + Sbjct: 230 FIVPKFLVGKDGALGARNAVTCGAIEHKMGIHGNATCVMNYDEATGFLIGAENRGLNAMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358 M L + ++ ++ A +YAR R +SG +I P ++R+ Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGVKAPDKKADPIIVHPDIRRS 349 Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + I A + A TAL +A+ + K R ++ PI K Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDEKERQTADDILGLVTPILKGVMTDRGFDHA 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLV 452 >gi|325675476|ref|ZP_08155160.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553447|gb|EGD23125.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 380 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 33/259 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E + G+D AA++ + ++ DG + ++G K W + +D + + A+ +G G CF Sbjct: 127 LSEPQAGSDAAALSCRATEV-DGGFRINGSKAWITNGGRADFYTLFARTSDDGARGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 LVP+ E GL + + + K+G R+ T + + F L+G TG + + Sbjct: 186 LVPKDTE-----GLNFGKPEEKMGLRAVPTTAAHYDDAFVPAERLIG----KTG--QGLP 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I LDS + ++ + V LA+ A+ YA+ R G +ID + +AD+A + Sbjct: 235 IAFSALDSGRLGIAAVAVGLAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVD 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A A D A+ R Y+R A + K A V +A++ GG GY ++ Sbjct: 295 SAR------ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQD 347 Query: 428 RSIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 348 FPVERYMREAKITQIFEGT 366 >gi|327478975|gb|AEA82285.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 596 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ + +DG Y +SG K F+S MS+ + L A V Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + LVP+ + DG+P N L +++K+G + AT + F G+++G+ N Sbjct: 222 KG-ISLLLVPKFIANADGTPGARNALSCGAIEHKMGIKGAATCVMNFDGATGWIVGEPNQ 280 Query: 305 STG----PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------- 353 + D + + L ++ + SLA A + R ++G D+P Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIAEQAYQGSLAYARERLQSRGLAGAQHPDKPADPIIVH 340 Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + ++ + + + +AA A L + E R + A ++ PI K + Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYCARQLDLEHGHPEPSYRKAASKRAALLIPIVKAFFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M V + ++ GG GYI E + + R+S + G+ LD + Sbjct: 401 MGQEVASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449 >gi|312110767|ref|YP_003989083.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311215868|gb|ADP74472.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 380 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYSRQVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V G+ G ++ ++ G + +K+G R++ T EL F N + NV Sbjct: 171 VTGKDERGKNIISAIIVPTDAPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P + K ++ LD +S++ + V +A+A + YA+ R G + ++ +A Sbjct: 228 DPKKGFKQFLHTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQTISKFQAIQFKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++I A + ++ A D+ K ++EA++A++ A + C +A++ G Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GY++E + RH R+ Sbjct: 341 GYGYMKEYGVERHLRD 356 >gi|90021530|ref|YP_527357.1| putative acyl-CoA dehydrogenase [Saccharophagus degradans 2-40] gi|89951130|gb|ABD81145.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40] Length = 595 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ ++ DG Y +SG K F+S+ D I+LA++ G Sbjct: 165 LTEAHCGTDLGMLRTKAEQNEDGSYSISGTKIFISAGEHDLAENIVHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L +DGS N + L+ K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKFLPSDDGSVGERNQVACGSLEEKMGIHGNATCVMNFDGAKGYLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSG--------GILIDQP 353 + L +A+ ++ G + SLA A + R +SG +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAELGYQKSLAYAKDRIQMRALSGVKNPDGPADPIICHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407 ++R + L + LA D A++ +++AA + ++A PI K + + Sbjct: 345 DVRRMLLTQKAFAEGGRMLIYFLAKQVDIESHAQNEADKAAASDMLALLTPIAKAFLTET 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A++C GG GYI E ++ R++ + + G+ LD+L Sbjct: 405 GFESANLAVQCFGGHGYIREWGAEQNVRDARISMLYEGTTGIQALDLL 452 >gi|254284206|ref|ZP_04959174.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR51-B] gi|219680409|gb|EED36758.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR51-B] Length = 602 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 59/329 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P++ S E+ T + L+E G+ ++ IT++ SDG Y L G K Sbjct: 149 WVPRLRSGEFAGT-------------MALSEPHAGSSLSDITTKAVLQSDGSYRLYGSKI 195 Query: 234 FLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLLEDGSP-----NGLCYQRLKN 277 ++S +S + +LA++EG + F+ P+ L D S N + L + Sbjct: 196 WISGGDQELSSNIVHAVLARIEGAPPGVPGISLFICPKFLLDESGQVSRRNDVHLTGLFH 255 Query: 278 KIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRV 330 K+G R + + L F G FL+G N G + M ++++ + +A ++++G + Sbjct: 256 KMGGRGHTSTALNFGEREGAVAFLVGQPNAGLGYMFHMMNEARVMVGMMAATLALTGFQY 315 Query: 331 SLAEAIHYARRRH----------VSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANS 379 A+ YAR R +S + LID ++R + A +L + Sbjct: 316 ----ALWYARERTQGRLPSNKNPLSAPVALIDHADVRRMLLAQKAYAEGAFSLCLFASQL 371 Query: 380 FDEAKSR--SEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D+A++ SE+ +A + PI K + + P A++ +GG+GY +E + Sbjct: 372 VDDARTHPDSEQREWAHDLLDFLTPIVKTFPSEFGPRANDLAIQVLGGAGYTDEHPVEMM 431 Query: 434 YRESPANSILLGSGNAMVLDVL--NLLEK 460 YR++ N I G+ LD+L L EK Sbjct: 432 YRDNRLNPIHEGTTGIQALDLLGRKLTEK 460 >gi|313499828|gb|ADR61194.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 591 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 31/284 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ Q +DG Y ++G K F+S ++D + L A V Sbjct: 162 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307 G + FLVP+LL G N L L++K+G + +T + F G+L+G++N Sbjct: 222 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEVNQGLACM 280 Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353 + D + + L ++ + + LA A + R ++G + ++P Sbjct: 281 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 340 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + ++ + + + TA L ++ A +R A A ++ PI K + + V Sbjct: 341 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 400 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ GG GYI E + + R+S + G+ LD++ Sbjct: 401 ASLGVQLYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 444 >gi|330872314|gb|EGH06463.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 592 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + ++NK+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIENKMGIQASATCVMNFDDATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|15559225|gb|AAH13756.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens] gi|312150506|gb|ADQ31765.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic construct] Length = 432 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + L D GL + +NK+G R+++T L F N + + N+ Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 K I L+ + ++ + LA+ I Y + R G L D ++ +A +A Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG G Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y ++ + +++R++ +I G+ N Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418 >gi|212532319|ref|XP_002146316.1| electron transport oxidoreductase, putative [Penicillium marneffei ATCC 18224] gi|210071680|gb|EEA25769.1| electron transport oxidoreductase, putative [Penicillium marneffei ATCC 18224] Length = 687 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 44/302 (14%) Query: 199 GLGLTEKRGGTDIAAITSQG--------QKISD------GIYCLSGHKWFLSSPMSDAFI 244 GL +TE+ GG+D+ + K +D G + L+G KWF +S I Sbjct: 266 GLWMTERAGGSDLTPTETTATYSPLGPDDKSTDADGFPLGPWVLNGLKWFSTSTEGSMAI 325 Query: 245 MLAQVEGRVGCFLVPR---LLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 +A+ + F VP + +G P NG+ +RLKNK+G + T ELE S G+ Sbjct: 326 AVARTPIGLSAFYVPMRRAVTVNGVPSVELNGVRIRRLKNKMGTKGLPTGELELSGMRGY 385 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMK 356 L+G + + + + A++SV L+ A +AR R V+ G L P+ Sbjct: 386 LIGKEGKGVNEIGVVLNITRIHLAMVSVGYAARGLSIARAFARVRKVARGTQLSSVPLHM 445 Query: 357 RAIADIALDIAAATALSFRLA-------------NSFDEAKSRSEEAAYARIMAPITKYW 403 + +A + A AL +A N F A ++ + A R++ + K Sbjct: 446 KTLAKAHVTYRAHLALCMFIAALLGRTEQPKASLNDFVPANAQ-DAGALLRLLGSVAKAT 504 Query: 404 CCKMAPAVIAEAMECIGGSGYIEER----SIARHYRESPANSILLGSGNAMVL--DVLNL 457 V+ +ME +GG GY+E ++AR R+ A IL+G G V+ DV+ + Sbjct: 505 ATMDCVGVLQCSMESLGGVGYLENDEAGFNVARVLRDCTA--ILIGEGTTDVIATDVVKV 562 Query: 458 LE 459 L+ Sbjct: 563 LK 564 >gi|330501353|ref|YP_004378222.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328915639|gb|AEB56470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 596 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ + +DG Y +SG K F+S +S+ I L A V Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYRVSGSKIFISGGEQDLSENIIHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + LVP+ + DG+P N L +++K+G + +T + F G+L+G+ N Sbjct: 222 KG-ISLLLVPKFIAAADGTPGERNSLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQ 280 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQ 352 + M + + + A+ YAR R S G+ +I+ Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPEKPADPIINH 340 Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 P ++R + + + +AA TA L + + A++R A ++ PI K + Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYTARQLDLEHGAESAEARKAAGKRAALLIPIVKAFFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M V + ++ GG G+I E + + R+S + G+ LD + Sbjct: 401 MGQEVASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449 >gi|256375705|ref|YP_003099365.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255920008|gb|ACU35519.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 383 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 47/266 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCF 256 LTE G+D ++ + +++ G + LSG K F+++ +D ++ A+ G V F Sbjct: 125 LTEPDTGSDAGSLAASATRVAGG-WRLSGRKVFITNGTWADVALVFARTGGPGPRGVTAF 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL- 315 LVP SP G + ++ K+G R AT EL LL D+ PV D +L Sbjct: 184 LVP----TDSP-GFTAREIRGKLGMRGQATAEL--------LLDDV-----PVPDDALLG 225 Query: 316 ----------IYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 LD MSV+ R SL A+ YAR R G + +++ +A Sbjct: 226 EEGGGFALAMAALDRGRMSVAAGCVGAARGSLEAALRYAREREQFGRPIAGFQLVQELLA 285 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++ AA L++R A+ D + EA+ A K + + + V A++ +G Sbjct: 286 DMAVETDAARLLTWRCADLADRGEPFRTEASMA-------KLYASEASVRVADRAVQVLG 338 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+++ +A+H R++ ++ G+ Sbjct: 339 GYGYLDDHPVAKHLRDTRVTTLYEGT 364 >gi|158293343|ref|XP_314701.4| AGAP008602-PA [Anopheles gambiae str. PEST] gi|157016659|gb|EAA10182.4| AGAP008602-PA [Anopheles gambiae str. PEST] Length = 417 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 24/258 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D+AA+T++ + +DG + L+G K W S S A I+ A V+ + Sbjct: 154 FALSEAGAGSDVAAMTTRATRDADGSWILNGTKAWVTSGIESVAAIVFATVDPALKYKGI 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLV + G+ G+ R ++K+G R +T +L N + + NV M+ Sbjct: 214 TAFLVD--FDSGALAGVHRGRPEDKLGIRGTSTCDLMLENV---RVPEANVLGTVGSGMR 268 Query: 314 ILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD A + ++ + + +A + YA++R GG LID P ++ IA++ + Sbjct: 269 IAMEQLDRARIGIASQAIGIGQAALETAVEYAKQRTAFGGTLIDLPAVRTRIAEMGTRLE 328 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L + A D ++ + A+ +A T + + +GG GY++ Sbjct: 329 MARLLVRKAAGEIDRGLRATKACSMAKWIAGETATYAAHGCQQI-------LGGMGYVKS 381 Query: 428 RSIARHYRESPANSILLG 445 R+YR++ I G Sbjct: 382 LPAERYYRDARITEIYGG 399 >gi|170702384|ref|ZP_02893274.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] gi|170132698|gb|EDT01136.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] Length = 596 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + GK Sbjct: 468 EIGDTVAALGK 478 >gi|86135909|ref|ZP_01054488.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85826783|gb|EAQ46979.1| probable acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 580 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 43/275 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+A + S+ + ++G Y +SG K F++ MS+ + L A Sbjct: 152 MNLTEPQAGSDLALVRSRAEAQANGTYKISGTKIFITYGEHDMSENTVHLVLARTPDAPA 211 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+ + + G+ N + +++K+G +++ T L+F GFL+G+ Sbjct: 212 GVKG-ISLFLVPKYMVNADGSLGARNSVICPSVEHKLGIKASPTAVLQFEEATGFLIGEE 270 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------- 348 N + +M ++SA +V +++ E A+ +A+ R S + Sbjct: 271 NAGLTYMFEM-----MNSARYAVGLQGIAVGERAYQQALAFAKERVQSAPVDGSTREAVT 325 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKY 402 ++ P ++R + + + A ++ A D A+ +++E A + + P+ K Sbjct: 326 IVHHPDVRRMLMRMRVLTEGARGMAMFAAGCQDMARNAPTPDAQTEAKALSEFLTPLVKG 385 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + + V + ++ GG G+IEE A+HYR++ Sbjct: 386 FSTENGVEVASLGVQVHGGMGFIEETGAAQHYRDA 420 >gi|262370610|ref|ZP_06063935.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314410|gb|EEY95452.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 607 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 37/291 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPQCGTDLGQVKTKAELNADGTYNISGTKIFISAGEQDLTENIIHIVLARLPDAPTGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G N + +++K+G R++AT L F N G+L+G+ N Sbjct: 225 KGISLFIVPKFLVNADSSLGERNPVTCGSIEHKMGIRASATAVLNFDNAVGYLIGEPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +AI ++ +S A+ YA+ R V+ I+ Sbjct: 285 LHAMFTFMNTARIGTAIQGIAHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344 Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 V + + A+ + + + ++A+ +A R + AA+ PI K + Sbjct: 345 DVRRMLLTQKAIAEGGRSMIYYAAQIADKMADALERGDTAAFEAHDDHLGFYTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ M+ GG GYI+E + + R++ ++ G+ LD++ Sbjct: 405 TELGLEAANHGMQVYGGHGYIKEWGMEQIARDARIATLYEGTTGVQALDLI 455 >gi|255319399|ref|ZP_05360615.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|255303535|gb|EET82736.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] Length = 593 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 53/372 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ ++ DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITGTKI 196 Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ +SD I L A R + F+VP+ L EDGS N + +++ Sbjct: 197 FITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F GF++G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQNAAQ 316 Query: 338 YARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 YA R V+ IL+ V +R + ++ + A+ A + + D K Sbjct: 317 YATDRIQGRSASGIKSPNKVADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITK 375 Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ A + ++ PI K + A +A GG GYI E + + R+ Sbjct: 376 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435 Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCK 495 I G+ D++ L++ E+ + + +D ++ + ++D ++ Sbjct: 436 IAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLDAAT 494 Query: 496 EDKGLARFLTEK 507 + + ++RF+ E+ Sbjct: 495 DIEAVSRFIIEQ 506 >gi|78223474|ref|YP_385221.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15] gi|78194729|gb|ABB32496.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens GS-15] Length = 615 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 168/404 (41%), Gaps = 70/404 (17%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A ++ + K + K+F+ E+ T + LTE G+++ A+ + Sbjct: 133 AAKVIEAYGSEEQKKSYMTKLFAGEWMGT-------------MCLTEPDAGSEVGAVQTV 179 Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS 266 + DG Y ++G K F+++ D ++LA+V G + F+VP+ L DG Sbjct: 180 ATRNGDGSYAITGTKIFITAGEHDLAGNIIHMVLARVAGDPPGTKGLSLFIVPKFLPDGV 239 Query: 267 PNG-----LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMKI 314 N + +++K+G T + F ++ G+LLG+ + + ++ Sbjct: 240 GNAGERNDVYCTGIEHKMGLHGLVTCTMAFGDSGKCTGYLLGEQGKGMAEMFHMMNEQRL 299 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIA 363 L+ ++ S S + A+ Y + R + +I+ P +KR + + Sbjct: 300 LVGVEGLSFSTS----AFMNAVDYTKSRVQGLSVYPGADKQKSVAIINHPDVKRMLLTMK 355 Query: 364 LDIAAATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + +L++ ++ D A R+ ++ PI K + A V A AM+C Sbjct: 356 AYVEGCRSLAYFTSSCMDNAGVADGADRARWQGLVELLTPIVKAYITDNAWTVTALAMQC 415 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLFEQLFSTL 472 GG GY + R R+ +I G+ +D++ N NL E + T+ Sbjct: 416 AGGYGYCSDYPFERLARDCKVTTIFEGTNGIQAMDLMFRKILGNNRVNFNNLLEMIDQTI 475 Query: 473 EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516 E+ + I++ + +E GLAR + E +A+S+AA Sbjct: 476 EK---GAADAEISVYAAIVKRARE--GLARIVEE---MAASSAA 511 >gi|4501859|ref|NP_001600.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Homo sapiens] gi|1168283|sp|P45954|ACDSB_HUMAN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SBCAD; AltName: Full=2-methyl branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD; AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase; Short=2-methylbutyryl-CoA dehydrogenase; Flags: Precursor gi|531391|gb|AAA74424.1| acyl-CoA dehydrogenase [Homo sapiens] gi|9739137|gb|AAF97921.1| short/branched chain acyl-CoA dehydrogenase [Homo sapiens] gi|55859559|emb|CAI10847.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens] gi|119569676|gb|EAW49291.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Homo sapiens] gi|189054383|dbj|BAG36909.1| unnamed protein product [Homo sapiens] gi|261858534|dbj|BAI45789.1| acyl-Coenzyme A dehydrogenase, short/branched chain [synthetic construct] Length = 432 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + L D GL + +NK+G R+++T L F N + + N+ Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 K I L+ + ++ + LA+ I Y + R G L D ++ +A +A Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG G Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y ++ + +++R++ +I G+ N Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418 >gi|329896907|ref|ZP_08271760.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] gi|328921534|gb|EGG28917.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] Length = 390 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 36/292 (12%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P V APK+ + E I LG+TE GG+D+A++ + ++ D Y Sbjct: 116 PEVKAAVAPKVLAGE-------------AWISLGITEPGGGSDVASLQTTARRDGDE-YV 161 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +SG K F++ M ++ A G G V LL G L K G ++ T Sbjct: 162 VSGSKTFITGGMRANWVSTAVRTGGPGPGGVSMLLIPTDAAGFSRTPLNKKQGWWASDTA 221 Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGM-----RVSLAEAIHY 338 L F L+G+ N + K++++ +S M ++ RV L +A+++ Sbjct: 222 TLYFDEVRVPVTNLIGEEN------QGFKVIMHNFNSERMGMAAQMEAAARVCLEDAVNW 275 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 AR R G L D V++ I+ + + A A + + + + A ++ A Sbjct: 276 ARERKTFGKRLADHQVIRHKISAMKQKLNATQAYIRACYEQIEIGQPNAADIALLKVQAS 335 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 +C + EAM+ +GG+GY+ + R YRE N+I GS M Sbjct: 336 EVMEFCAR-------EAMQILGGAGYLRGNRVERIYREVRVNAIGGGSEEIM 380 >gi|319763044|ref|YP_004126981.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330825124|ref|YP_004388427.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317117605|gb|ADV00094.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329310496|gb|AEB84911.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 596 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 160/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ S ++ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDALKATYLEKLISGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + +DG Y L G K F++ D ++LA+V G + F+V Sbjct: 171 DLALVRTRAEPQADGTYKLFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + DGS N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 231 PKFMVHADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKR- 357 M I++ + V G+ V+ +A+ YA+ R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVQYAKDRVQSRPVDGSVAGSAAIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A + +A+ A ++ A+ +A+ R + AA+ M P+ K + +M+ V Sbjct: 348 LMTMRAYTEGCRGMASVAAAAYDAAHHHPDAQVRKDNAAFYEFMVPLVKGYSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILTIYEGT 441 >gi|146284172|ref|YP_001174325.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145572377|gb|ABP81483.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 619 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 36/290 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y L+G K F+SS D I+LA++ Sbjct: 183 LTEPHCGTDLGMLRTKAEPQADGSYKLNGTKIFISSGEHDMAENIVHIVLARLPDAPAGT 242 Query: 253 --VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L E G NG+ +++K+G NAT + F GFL+G N Sbjct: 243 KGISLFIVPKFLPNAEGEAGERNGVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKG 302 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ I YAR R + +I P Sbjct: 303 LNCMFTFMNTARLGTALQGLAHAEVAFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 362 Query: 354 VMKRAIADIALDIAAATALSFRLAN-------SFDEAKSRSEEAAYARIMAPITKYWCCK 406 ++R + + A+ + A S DE + ++ +A A + PI K + + Sbjct: 363 DVRRMLLTMKAFAEGNRAMLYFAAKQVDVMQRSQDEEQRKAADAMLA-FLTPIAKAFMTE 421 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 422 VGFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISCLYEGTTGIQALDLLG 471 >gi|158520643|ref|YP_001528513.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509469|gb|ABW66436.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 386 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 11/262 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LG+TE GG+D+A + + + D Y ++G K F++S + + A G G + Sbjct: 131 LGITEPGGGSDVANLQTTAVRDGDD-YIVNGSKTFITSGIRADQLTCAVRTGDKGAHGIS 189 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ + G R K+G ++ T E+ F N +G+ N + + + Sbjct: 190 FLVIEADTPGYATGRKLEKMGWLASDTGEIFFDNCRVPVANRIGEENSGFYTIMENFQME 249 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L +M+ +++L E+I YA++R G L V + + D+A + A+ ++R+ Sbjct: 250 RLHLCVMANMTAQLALEESIKYAKQRQAFGKPLKGFQVTRHKLVDMATLVEASREFTYRV 309 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + +++ +E + A K + C+++ V +A++ GG GY++E + R YR+ Sbjct: 310 AAKMNAGQNQVKEISMA-------KNFACQVSDKVTYDAVQIFGGYGYMKEYMVERLYRD 362 Query: 437 SPANSILLGSGNAMVLDVLNLL 458 + SI G+ M + N + Sbjct: 363 NRILSIGGGTTEIMKEIIANFV 384 >gi|301064561|ref|ZP_07204957.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300441309|gb|EFK05678.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 377 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 24/262 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 LTE G+D+ +++ QK G Y L+G K W + P++D + +L Q + + + Sbjct: 123 LTEPEAGSDLGNVSTLAQKTDSG-YRLNGMKTWVTNGPVADFYTVLMQTDPKKKFRGLNF 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F VPR G+P G + + +G R+ E+ F + +LG + + Sbjct: 182 FFVPR----GTP-GFSNSKAFDLLGTRTTPISEIAFKDCLVPHHHMLGAEGRGLSNLLSI 236 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 I +A +++ R ++ ++I YAR R G + +++ +A++A+D+ A+ + Sbjct: 237 LAEIRTMTAALAIGLQRAAMNDSIQYARERVQFGQTISKYQLIQAKVANMAVDLEASRLM 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +++ + DE K E++ A KY+ + A A +G Y E + R Sbjct: 297 TYKATHMIDEKKEALTESSMA-------KYFATEAACRAADHATRILGAYAYSMEYAAQR 349 Query: 433 HYRESPANSILLGSGNAMVLDV 454 +YR++ +L G G+ +L Sbjct: 350 YYRDN--RFLLYGGGSHEILQT 369 >gi|124009115|ref|ZP_01693798.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] gi|123985329|gb|EAY25249.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] Length = 384 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 51/300 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229 K W PK+ + E+ IG GLTE G+D + + + DG + L+ Sbjct: 112 KRWLPKLATGEW--------------IGAWGLTEPNTGSDAGNMRTTA--VLDGNEWVLN 155 Query: 230 GHKWFLSSPMS-DAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 G K F++ +S + +++A+ G F+V R G + +NK+G R+ Sbjct: 156 GAKNFITHGISGNIAVVVARTGEPNESGNASAFVVER-----GTMGFAGGKKENKLGMRA 210 Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335 + T E+ F N +LG NV G + + IL D +S+S + + +AE A Sbjct: 211 SETAEMIFDNCRIPKENILG--NVGDGFRQALAIL---DGGRISISALSIGIAEGAYEAA 265 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + YA+ R G + + + +AD+A +I AA L+ R ++ D K +E+A A Sbjct: 266 LQYAKERQQFGQSIANFQGISFKLADMATEIDAAKLLTERASDLKDAGKKVGKESAMA-- 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 KY+ ++A V EA++ GG GY+++ + + YR+S +I G G + + V+ Sbjct: 324 -----KYYSSEVAVRVSNEAVQIFGGYGYVKDFPVEKFYRDSKLCTI--GEGTSEIQKVV 376 >gi|126666970|ref|ZP_01737946.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17] gi|126628686|gb|EAZ99307.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17] Length = 599 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 39/310 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ + DG Y ++G K F+S+ D I+LA++ G Sbjct: 165 LTEAHCGSDLGTLRTKAEPNMDGSYSITGTKIFISAGEHDLTDNIVHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L +DGS N L +++K+G +NAT + F G+L+G N Sbjct: 225 KGISLFVVPKCLPAQDGSAGERNALSCGSIEHKMGIHANATCLMNFDGAKGWLIGAENKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGI--------LIDQP 353 + + + +AI + + L ++ YA+ R +SG +I P Sbjct: 285 LNAMFTFMNVARIGTAIQGLGAAELGLQGSVAYAKDRLAMRALSGAKNPDSYADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR-----IMAPITKYWCCKM 407 ++R + A AL + A D +S ++EE A + PI K + ++ Sbjct: 345 DVRRMLLTQKAIAEGARALIYMTAQKADIVQSGKTEEERKAADELLGFLTPIAKAFLTEI 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 + M+ GG GY+ E + ++ R++ I G+ LD+L L+ +G +L Sbjct: 405 GYESASLGMQVFGGHGYVSEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 464 Query: 465 --FEQLFSTL 472 F +L T Sbjct: 465 KGFTKLVHTF 474 >gi|91088951|ref|XP_973830.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] gi|270011559|gb|EFA08007.1| hypothetical protein TcasGA2_TC005596 [Tribolium castaneum] Length = 405 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 L+E G+D+ A+++ ++DG + L+G K W S P+ A I+ A V+ + Sbjct: 145 FALSEPDAGSDVGAMSTTA--VADGDCFVLNGTKSWVTSGPVGKAAIVFATVDKQLRHKG 202 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 + F+VP L DG G + ++K+G R++ T L N ++GD V G V Sbjct: 203 ITAFIVP-LPSDGVTLG----KKEDKLGIRASPTCNLIMDNVRVPKSNVIGD--VGDGFV 255 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 M LD A + ++ + +A+A +HYA +R G + +K +AD+A+ Sbjct: 256 IAMA---QLDFARVGIAAQALGIAQAALELAVHYASQRKSFGQTINQFQAVKLRLADMAI 312 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L +R A DE + ++E++ A++ A + A + A++ +GG GY Sbjct: 313 KLESARLLVWRAAVLCDEPQRSTKESSMAKLAAS-------EAATFITHGAIQILGGMGY 365 Query: 425 IEERSIARHYRESPANSILLG 445 I + RHYR++ I G Sbjct: 366 ISDMPAERHYRDARITEIYGG 386 >gi|170726671|ref|YP_001760697.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812018|gb|ACA86602.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC 51908] Length = 585 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 36/297 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ DG Y ++G K F++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRNIRTKATPNDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDTSG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G NG+ +++K+G +++AT + + G+L+G N G Sbjct: 224 ISLFLVPKIKVDDEGNLGEANGVTVGSIEHKMGLKASATCVMNYDGAQGYLIGKPN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352 V ++ Y AI + G+ S A A YA+ R +GG IL+ Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATSDPILVHG 340 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCKM 407 V +R + +I + A ALS D AK EA Y ++ P++K + Sbjct: 341 DV-RRMLLNIRVLTEAGRALSVLTGQQLDIAKYGDGEAQAKANRYVGLLTPVSKAFLSDR 399 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 A + GG GYI E I + R++ I G+ +D L G NL Sbjct: 400 GLDAAVTAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|254429877|ref|ZP_05043584.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196196046|gb|EDX91005.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 598 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ ++ + T + PK+ S E+ T + LTE G+ Sbjct: 125 MYPGLSHGAVATIEEHGTDEQKNGYLPKLTSGEWTGT-------------MCLTEPSCGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ + S+ + +DG Y ++G K F+S+ D I+LA++ G + F+V Sbjct: 172 DLGILKSKAEPNADGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIV 231 Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DG+ N + +++K+G +++AT + F G+L+G N + Sbjct: 232 PKFLTDGNGSVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L +AI V+ + + YA+ R +SG +I P ++R + Sbjct: 292 NFARLGTAIQGVAHAEIGFQGGLTYAKDRLAMRSLSGPKNPEGPADPIIVHPDVRRMLLT 351 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415 AL + A D+ K +EAA ++ PI K + + Sbjct: 352 SKSFAEGGRALVYLCAQLGDKVKLEKDEAARKEADDLMALLTPIAKAFVTEAGLEAANHG 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R++ +++ G+ LD+L Sbjct: 412 VQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLG 452 >gi|88802456|ref|ZP_01117983.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P] gi|88781314|gb|EAR12492.1| probable acyl-CoA dehydrogenase [Polaribacter irgensii 23-P] Length = 388 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + S K D Y L+G K F+++ + SD I+ A+ + + Sbjct: 125 LCITEPFGGSDVAGMRSTAAKQGDK-YILNGSKTFITNGVYSDYLIVAAKTDPSDKYKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + D S GL +L +K+G R++ T EL F N ++ + E+ K Y Sbjct: 184 SLFVVDRSSKGLSATKL-DKLGWRASDTAELAFDNV------EIPLENRLGEEGKGFPYI 236 Query: 318 -----LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ IM V+ +L A+ Y + R G L ++ IA++A + Sbjct: 237 MQHFALERLIMGVNAHARAEFALDYAVDYIQERVAFGKSLDQFQALRHKIAEMASKVDMC 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ + D AY A I+K KMA VI +A++ +GG GYIE+ Sbjct: 297 REYNYSITKRLDAG-------AYVVKEASISKLLSTKMADEVIYDALQMLGGYGYIEDYP 349 Query: 430 IARHYRESPANSILLGSGNAMVL 452 +AR R+S I G G + +L Sbjct: 350 MARLLRDSRLGPI--GGGTSEIL 370 >gi|291334178|gb|ADD93846.1| acyl CoA dehydrogenase [uncultured marine bacterium MedDCM-OCT-S08-C116] Length = 596 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 38/295 (12%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K S E T PM + + LTE + GTD+A I S+ D + ++G K +++ Sbjct: 138 KSASPELQQTFIPPMVEGRWTGTMNLTEPQAGTDLAGIKSRAVPHGDH-FLITGQKIYIT 196 Query: 237 SPMSDA-----FIMLAQV----EGRVG--CFLVPRLLEDGS-----PNGLCYQRLKNKIG 280 D ++LA+ EG G F+VP+ L D + PN L ++ K+G Sbjct: 197 YGEHDMAENIIHLVLARTPDAPEGMKGISVFIVPKFLPDDAGNYTKPNDLRCLSIEKKLG 256 Query: 281 NRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAE 334 + + T +++ G+L+G N ++ M ++ + + G+ +S + Sbjct: 257 IKGSPTAVMQYGEAGGAVGYLVGAENHG---IDIMFAMMNHARIAVGLQGLAISERAYQQ 313 Query: 335 AIHYARRR-------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--- 384 A YA+ R G +++ P + R + + +I A AL A + D+A+ Sbjct: 314 ARGYAKDRVQGVPLDGKKGDAIVNHPDVLRLLGSMKAEIEAMRALMMVGAAAMDKARHAS 373 Query: 385 --SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 +++ A A ++ PI K W + + + ++A++ GG G+IEE A+HYR++ Sbjct: 374 ANGKNDHEARAGLLIPIIKGWMTERSLDITSDALQIHGGMGFIEETGAAQHYRDA 428 >gi|257093920|ref|YP_003167561.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046444|gb|ACV35632.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 597 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 60/362 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----E 250 + LTE G+D+AA+ ++ + +DG Y + G K F++ M+D I +LA+ E Sbjct: 162 MNLTEPSAGSDLAAVRTRAEPQADGSYKIFGQKIFITYGEHDMADNIIHLVLARTPTAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLL 299 G G F+VP+ L +DGS + C +++K+G ++ T + F S G+L+ Sbjct: 222 GVKGISLFVVPKFLVNDDGSLGARNDAYCVS-IEHKLGIHASPTAIMAFGDHSGAIGYLV 280 Query: 300 GDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRR------HVSGG--- 347 G+ N +E M I++ + V+ + A YAR R V GG Sbjct: 281 GEENRG---LEYMFIMMNAARFGVGLEGVAACERAYQRARDYARDRIQCTDIGVRGGPKV 337 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401 +I P ++R + + A AL++ +A + D A ++R A+ +M P+ K Sbjct: 338 AIIQHPDVRRMLMTMKSYAEATRALAYVVAAAHDAAVHHADAETRKRNQAFVDLMIPVVK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 W + + + ++ GG GY+EE A+H R++ ++I G+ D++ Sbjct: 398 GWSTESGVTIASIGVQVHGGMGYVEETGAAQHLRDAQISTIYEGTTGIQANDLIG----- 452 Query: 462 TNLFEQLFSTLEQDLGSSGKKVITILR--DSISLCKEDKGLARFLTEKIALASSAAALYR 519 + ++ G++ K VI ++R DS L K+ G A F + LA+ AL Sbjct: 453 --------RKMAREGGATLKSVIAMMRALDS-DLAKQ--GGAHFAAIRSRLAAGVDALAT 501 Query: 520 AG 521 AG Sbjct: 502 AG 503 >gi|163856212|ref|YP_001630510.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163259940|emb|CAP42241.1| probable acyl-CoA dehydrogenase [Bordetella petrii] Length = 608 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 48/281 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ +DG Y LSG K F++ D ++LA+ G Sbjct: 161 MNLTEPQAGSDLAQVASRAVPQADGTYRLSGQKIFITYGEHDLAENIIHLVLARTPGAPA 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295 + F+VP+ L +DGS N + L++K+G + T L + + Sbjct: 221 GVKGISLFIVPKFLVNDDGSLGARNDVWCASLEHKLGIHGSPTAVLLYGSGKGDVGEGAV 280 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------H 343 G+L+G+ N +E M I +++A V ++L+E A+ YA+ R Sbjct: 281 GYLVGEQNRG---LEYM--FIMMNAARFGVGQQGIALSERAYQHALAYAQERVQGRAVEG 335 Query: 344 VSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIM 396 +G + I + P ++R + + AA A+SF A + D +A+ R+ A+ + Sbjct: 336 SAGPVTISRHPDVQRMLLTMRGLTEAARAVSFVAAAAHDKGVHHPDAEVRARNRAFYEYL 395 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 PI K + + A V + ++ GG GYIEE A++YR++ Sbjct: 396 VPIVKGFSTESAVEVASLGIQVHGGMGYIEETGAAQYYRDA 436 >gi|83592644|ref|YP_426396.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] gi|83575558|gb|ABC22109.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] Length = 596 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 65/367 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249 LTE + GTD+ + ++ +G Y ++G K F+S+ D ++LA+ + Sbjct: 164 LTEPQCGTDLGLLRTKAVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGI 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP++L E+G+ N + L++K+G ++++T L F G+L+G+ Sbjct: 224 KG-ISLFLVPKVLVTEEGALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGE--- 279 Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGGILIDQP- 353 P + M+ + +++A + V + LAEA + YAR R SG D+P Sbjct: 280 ---PHKGMRAMFAMMNTARLGVGVQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPA 336 Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 + +RAI + +AA L+ + + +R+E + +M P+ Sbjct: 337 DPLIVHPDVRRMLLTQRAIVEGGRALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVV 396 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K + ++ GG GYI E + ++ R+ I G+ LD++ Sbjct: 397 KALLTDLGSEATNLGVQVFGGHGYIREHGMEQYIRDCRITQIYEGTNGIQALDLVG---- 452 Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFL----TEKIALASSAAA 516 L ++ G + ++ + D I +D LA F+ + L + A Sbjct: 453 ---------RKLPENAGRNLRRFFHPVADYIEARLDDDTLAEFVGPLAKTFVRLQQATAQ 503 Query: 517 LYRAGMN 523 + R GM Sbjct: 504 VARVGMT 510 >gi|33592120|ref|NP_879764.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33602428|ref|NP_889988.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33571764|emb|CAE41265.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33576867|emb|CAE33947.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|332381536|gb|AEE66383.1| acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 608 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 65/332 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+T + + + PK+ ++ T + LTE + G+ Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ + DG Y LSG K F++ +++ I L A V+G + F+ Sbjct: 171 DLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304 VP+ L EDGS N + L++K+G + T L + G+L+G+ N Sbjct: 230 VPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANR 289 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LID 351 +E M I +++A SV + ++E A YAR R I + Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAH 344 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 P ++R + + AA A+S+ A + D +A+ R+ A+ + PI K + Sbjct: 345 HPDVQRMLLTMRALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFST 404 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V + ++ GG G+IEE A+HYR++ Sbjct: 405 ESAVEVASLGIQVHGGMGFIEETGAAQHYRDA 436 >gi|254785957|ref|YP_003073386.1| acyl-CoA dehydrogenase domain-containing protein [Teredinibacter turnerae T7901] gi|237686128|gb|ACR13392.1| acyl-CoA dehydrogenase domain protein [Teredinibacter turnerae T7901] Length = 594 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ + ++ + DG Y + G K F+S+ D I+LA++ EG Sbjct: 165 LTEAHCGTDLGMLKTRAEPQDDGSYRIQGSKIFISAGDHDLAENIVHIVLARLPDAPEGT 224 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L EDGS N + +++K+G NAT L F + G+L+G N Sbjct: 225 KGISLFIVPKYLPAEDGSVGERNAVTCGSIEHKMGIHGNATCVLNFDDATGYLIGPPNRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQP 353 + L +A+ ++ V +++ YA+ R +SG +I P Sbjct: 285 LHCMFTFMNTARLGTALQGLAHAEVGYQKSLSYAKERLQMRALSGPKNPSGPADPIIVHP 344 Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 ++R A A+ + + + D+A ++E A + PI K + + Sbjct: 345 DVRRMLLTQKAFAEGGRMLIHYCSQLVDIEQLSDDAGRKTEAADLLAFLTPIAKAFLTET 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A++C GG GYI E + ++ R++ + G+ LD+L Sbjct: 405 GFEAANHALQCFGGHGYIREWGVEQNVRDARIAMLYEGTTGIQALDLLG 453 >gi|213584052|ref|ZP_03365878.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 85 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 45/75 (60%) Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 R+ P K+ CK +AEAME +GG GY EE + R YRE P NSI GSGN M LD Sbjct: 1 RLFTPAAKFAICKQGIPFVAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLD 60 Query: 454 VLNLLEKGTNLFEQL 468 VL +L K +++ L Sbjct: 61 VLRVLTKQHGVYDVL 75 >gi|299134749|ref|ZP_07027941.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] gi|298590559|gb|EFI50762.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] Length = 594 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 48/358 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + G+D+ A+ ++ +K DG Y LSG K F++ D ++LA++ G Sbjct: 163 LTEPQAGSDVGALRTRAEKQPDGSYRLSGTKIFITYGDHDMTGNIVHLVLARLPGAPEGT 222 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 + F+VP+ L + G+ N + L++K+G + T + + G+LLG+ Sbjct: 223 KGISLFVVPKFLVNADGSLGARNDIYASGLEHKLGIHGSPTCTMTMGDKGGAVGYLLGEE 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------GG----ILIDQ 352 N + M L + V + +A+ YA R GG I + Sbjct: 283 NNGMACMFTMMNQARLGVGLEGVGIAERATQQALAYAHERKQGRALGHKGGEPDPIAVHP 342 Query: 353 PVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 V + RA+ A I ATA++ +++ + +R + A A ++ P+ K + + Sbjct: 343 DVKRNLLTMRALTAAARTICYATAVAIDISHEAKDETAREKADARAGLLTPLAKAFSTDI 402 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS----GNAMVLDVLNLLEKGTN 463 A V A ++ GG+G+IEE A++ R++ +I G+ N +V+ L +KG Sbjct: 403 ANEVAALGVQVHGGAGFIEETGAAQYVRDARILTIYEGTNGIQANDLVMRKLG-ADKGAA 461 Query: 464 L------FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515 + EQ+ + +E + ILR++I + +L EKI +S A Sbjct: 462 VRDLLDELEQIVTRVEASNDPAFGATGAILREAIGSAAR---ASEWLLEKIMNSSDEA 516 >gi|78224498|ref|YP_386245.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15] gi|78195753|gb|ABB33520.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens GS-15] Length = 380 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 33/259 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGC-- 255 ++E G+D+ +I + + DG Y +SG K F + P++ + +LA+ GR G Sbjct: 124 VSEPGAGSDVGSIRTTA--VRDGNEYVISGTKCFSTNGPVASYYTVLARTSENGRNGLSF 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDM 312 FLV DG GL +++ K+G R + T E+ E G LLG+ N G + M Sbjct: 182 FLV-----DGDAPGLKVGKIEKKLGQRGSKTSEMYLDEVRVPAGNLLGEEN--KGFLLAM 234 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 K D + ++ + +AE + ++R R G L + ++++ IAD A I Sbjct: 235 K---DFDMSRPAIGAQALGIAEGAFDQMLKHSRERKTFGQPLCEHQMIQQIIADSATKIE 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L +R A +D+ K ++ +A + K + A + +A++ GG GY+++ Sbjct: 292 AARGLIYRAAALYDQGKRNTK-------LASMGKLFASDAAMQITTDAIQVFGGYGYMQD 344 Query: 428 RSIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 345 YPVERMFRDAKLTQIFEGA 363 >gi|89894462|ref|YP_517949.1| hypothetical protein DSY1716 [Desulfitobacterium hafniense Y51] gi|219668887|ref|YP_002459322.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] gi|89333910|dbj|BAE83505.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539147|gb|ACL20886.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] Length = 380 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC-FL 257 GLTE G+D + + K D Y ++G K F+++ +D +++ AQ++ G + Sbjct: 123 FGLTEPMAGSDASGTRTTAVKDGDD-YIINGTKIFITNAYEADTYVVTAQMDKSKGNKGI 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 +LE G P G + + + K+G RS+AT EL F N + N+ + KI ++ Sbjct: 182 AAFILEKGMP-GFSFGKKEKKMGIRSSATYELVFDNV---RVPGENLLGQEGQGFKIAMV 237 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIALDIAAATA 371 LD + ++ + +A+ + R++ + QP+ + +AD+A I AA Sbjct: 238 TLDFGRIGIASQALGIAQGAYEQARKYAKERVQFGQPIAQFQANQFKLADMATQIEAARL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ A + K S+ +A A++ A T W V +A++ GG GY E + Sbjct: 298 LVYQAAYLATQHKPVSKASAMAKLHASETAMW-------VTTQAVQMHGGYGYTREYPVE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKITEIYEGT 365 >gi|262380863|ref|ZP_06074014.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|262297498|gb|EEY85416.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 593 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 53/372 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ ++ DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGSYSITGTKI 196 Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ +SD I L A R + F+VP+ L EDGS N + +++ Sbjct: 197 FITGGDHDLSDNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNPVGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F GF++G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDGAKGFIVGKENEGLAAMFVMMNYERLSMGIQGIGASEFAYQNAAQ 316 Query: 338 YARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 YA R V+ IL+ V +R + ++ + A+ A + + D K Sbjct: 317 YATDRIQGRNASGIKSPNKVADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITK 375 Query: 385 SRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ A + ++ PI K + A +A GG GYI E + + R+ Sbjct: 376 FSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435 Query: 439 ANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCK 495 I G+ D++ L++ E+ + + +D ++ + ++D ++ Sbjct: 436 IAQIYEGTNGVQSQDLIGRKLIKNNGAFLEEYIAEI-RDFANNMDTHLNFIKDATLDAAT 494 Query: 496 EDKGLARFLTEK 507 + + ++RF+ E+ Sbjct: 495 DIEAVSRFIIEQ 506 >gi|187477865|ref|YP_785889.1| acyl-CoA dehydrogenase [Bordetella avium 197N] gi|115422451|emb|CAJ48976.1| probable acyl-CoA dehydrogenase [Bordetella avium 197N] Length = 606 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 65/332 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+ +P K + P++ + T + LTE + G+ Sbjct: 124 LCPMLTDGVIEALLMVGSPAQQKAYVPQLIGGRWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ DG Y L+G K F++ +++ I L A V+G + F+ Sbjct: 171 DLALLATRAVPQPDGSYRLTGQKIFITYGEHDLAENIIHLVLARLPDAPAGVKG-ISLFI 229 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304 VP++L EDGS N + L++K+G + T + + G+L+G N Sbjct: 230 VPKVLVNEDGSLGRRNDVWCASLEHKLGIHGSPTAVMLYGAGKGEVGEGAVGYLIGQANR 289 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR-------HVSGGILIDQ 352 +E M I +++A SV ++L+E A YAR R ++G + I Sbjct: 290 G---LEYM--FIMMNAARFSVGQQGIALSERAYQKAQAYARERIQGRAIEGLAGPVSISH 344 Query: 353 -PVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCC 405 P ++R + + AA A+S+ A + D+ K R+ A+ + PI K + Sbjct: 345 HPDVQRMLLTMRALTEAARAVSYVAAAAHDKGKHHPDAEVRARNQAFYEYLVPIVKGFST 404 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V + ++ GG G+IEE A+HYR++ Sbjct: 405 ESAVEVASLGVQVHGGVGFIEETGAAQHYRDA 436 >gi|86738776|ref|YP_479176.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3] gi|86565638|gb|ABD09447.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3] Length = 614 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 87/372 (23%), Positives = 165/372 (44%), Gaps = 56/372 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F+++ P + ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTRAIEQPDGTWHIEGVKRFITNGDWDVPENIIHLVLARPEGHGPGS 223 Query: 253 --VGCFLVPRLLED---GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ + D G+P NG+ ++ K+G + +AT EL F G+L+GD Sbjct: 224 KGLSMFVVPKFMPDPRTGTPGARNGVYVTNIEKKMGLKVSATCELRFGERAPAVGWLVGD 283 Query: 302 LNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGG------------ 347 V G + +++ Y + S ++ + A+ +AR R V G Sbjct: 284 --VHEGIAQMFQVIEYARMMVGSKAIATLSTGYLNALEFARTR-VQGADLARASDKTAPR 340 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYAR----IMAPI 399 +I P ++R + + +L A D A R E A ++ PI Sbjct: 341 VTIIHHPDVRRMLMMQKVYAEGMRSLVLYTATFQDRVALAGERGEADELAERINDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + ++A +++ +GGSGY+++ I ++ R++ +++ G+ + D+ Sbjct: 401 VKGVGSERSYELLASSLQILGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 460 Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-----KGLARFLTEKIALA 511 + ++G L L G +G + R+++ + ED L FLT A Sbjct: 461 VRDQGQALASVLGEIQTFVKGEAGNGALRAEREALGVALEDVQSMVNSLVGFLT---GAA 517 Query: 512 SSAAALYRAGMN 523 AAA+Y+ G+N Sbjct: 518 EEAAAIYKVGLN 529 >gi|310658439|ref|YP_003936160.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium sticklandii DSM 519] gi|308825217|emb|CBH21255.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium sticklandii] Length = 379 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD A Q + DG Y L+G K F+++ + +I++A Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDEYVLNGSKIFITNAGYAHTYIIMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + G + + D G + K+G R +AT EL F N Sbjct: 171 MTDKKAGTRGISAFIVDADTPGFSVGPKEKKLGIRGSATCELIFEN-----------CRI 219 Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353 P E++ K I A+ ++ G R+ +A E IHY + R G + + Sbjct: 220 PKENILGKEGIGFKVAMKTLDGGRIGIAAQALGIAQGALDETIHYVKERKQFGRSIANFQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+A I +A L ++ A + D+ S S EAA A+++A T A V Sbjct: 280 NTQFQLADMAAKIESARLLVYKAAYNKDKGLSYSYEAAMAKLVAAET-------AMEVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY E + R R++ I G+ Sbjct: 333 KAVQLHGGYGYTREYPVERMMRDAKITEIYEGT 365 >gi|295399983|ref|ZP_06809963.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977762|gb|EFG53360.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 380 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D + + DG Y ++G K ++++ +++ Sbjct: 113 PMAKGETLGAFGLTEPNAGSDAGGTRTTA--VLDGDEYVINGEKCWITNAQYSRQVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 V G+ G ++ ++ G + +K+G R++ T EL F N + NV Sbjct: 171 VTGKDERGKNIISAIIVPTDAPGFTIRSNYDKMGVRASNTCELVFENV---RVPKENVLG 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P + K ++ LD +S++ + V +A+A + YA+ R G + ++ +A Sbjct: 228 DPKKGFKQFLHTLDGGRISIAALAVGIAQAAFEKALQYAKERVQFGQAISKFQAIQFKLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A++I A + ++ A D+ K ++EA++A++ A + C +A++ G Sbjct: 288 DMAMEIELARNMVYKAAWLKDQGKPFTKEASFAKLFASEMGFRVCN-------QAIQIHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GY++E + RH R+ Sbjct: 341 GYGYMKEYGVERHLRD 356 >gi|258589057|gb|ACV82568.1| acyl-CoA dehydrogenase domain protein [uncultured bacterium] Length = 548 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 82/357 (22%), Positives = 155/357 (43%), Gaps = 42/357 (11%) Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ YL+ QL +M P + ++AL+ K F ++ P K+ ++ + Sbjct: 120 AKRYLLHQLGEFGVMCPIACTEGLIALI-----------KQFPEDHSPEIKSILEHCTEG 168 Query: 198 I----GLG---LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV 249 + G+G +TE +GG++I A + + + +G Y L G K+F S+ +D ++ A+V Sbjct: 169 VNGEYGIGAQFVTEIQGGSNIPA--NLLEAVPEGSHYRLYGSKFFTSAVHADYAVITAKV 226 Query: 250 EGR--VGCFLVPRLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G VG F+VP ++ N R+K K+G T ELE+ + +G N Sbjct: 227 SGSEDVGTFVVPAWMQGNKDKEIRNHFRINRIKWKLGTAEVPTAELEYDGAICYKVGPTN 286 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 V + + L + +AI + + M + EA Y+ R V G + + + + + D+ Sbjct: 287 RGVANVVGIVLSLSRIAAAITNAASMTRASREAQLYSEFREVFGAKIGEWALANQQVRDV 346 Query: 363 ALDIAAATALSFRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + + A F++ + F +E E R + I K A Sbjct: 347 VHEAQRSLAGLFKIFSLFQSLGGHLQPGLASEEPSKIQRERFLLRELIIIQKLVTSHDAV 406 Query: 410 AVIAEAMECIGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 I + + GG+G IE+ S + R +R++ N + G N +++ V + + + Sbjct: 407 NTIRKGIAIFGGNGVIEDFSALPRLFRDAMVNELWEGPRNVLLMQVFRDISRAAAFY 463 >gi|194391390|dbj|BAG60813.1| unnamed protein product [Homo sapiens] Length = 330 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V+ +G + Sbjct: 74 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 132 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 L D GL + +NK+G R+++T L F N + + N+ K I L+ Sbjct: 133 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIGHGYKYAIGSLN 189 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + LA+ I Y + R G L D ++ +A +A + AA L++ Sbjct: 190 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 249 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + K +EA+ A KY+ ++A ++ +E +GG GY ++ + +++ Sbjct: 250 NAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYF 302 Query: 435 RESPANSILLGSGN 448 R++ +I G+ N Sbjct: 303 RDAKIGTIYEGASN 316 >gi|54302789|ref|YP_132782.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9] gi|46916213|emb|CAG22982.1| putative acyl-CoA dehydrogenase [Photobacterium profundum SS9] Length = 396 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 43/290 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR---- 252 LTE G+D AA+T+ +KI D Y L+G K F+S + +D +++A+ +GR Sbjct: 124 LTEPNAGSDAAALTTSAKKIKDQ-YILNGAKTFISGAGETDVLVVMARTVNDEQGRNKKA 182 Query: 253 --------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP G+ Y R + K+G S T + F N LLG Sbjct: 183 EHKSGAKGISAFIVP-----ADATGITYGRKEPKMGWNSQPTRSITFDNVAIPARNLLG- 236 Query: 302 LNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G MK L ++ A SV + +L +A Y R G L ++ + Sbjct: 237 -QEGEGFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGKSLAQFQGLQFKL 295 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAM 416 AD+A ++ AA L A+ D + E AY A+ A T + C +A+ Sbjct: 296 ADMATELVAARQLVRYAASKLD--RQDPEATAYCAMAKRFATDTGFTVCD-------QAL 346 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 + GG GYI+E + R++R+ + IL G+ M L + LL +GT + Sbjct: 347 QLYGGYGYIKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396 >gi|302533579|ref|ZP_07285921.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] gi|302442474|gb|EFL14290.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] Length = 384 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 50/305 (16%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA T + W P++ S E A+G GLTE G+D A+T++ Sbjct: 95 AKTVAAWGTEEQKRSWLPRLCSGE--------------ALGCFGLTEPGTGSDAGALTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGL 270 + D Y +SG K F+++ +D ++ A+++ G G FLVP SP GL Sbjct: 141 AVREGDA-YVISGSKMFITNGTWADVVLLFARIDPAIPGHRGISAFLVPA----DSP-GL 194 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI----MSVS 326 + + K+G R AT EL T + + GP + K SA+ MSV+ Sbjct: 195 TRREVHGKLGLRGQATAEL----TLDAVRVPASAMLGP--EGKGFSVAMSALAKGRMSVA 248 Query: 327 GMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 V +A+ A+ YA RR G + +++ IADI++D+ AA L++R+A+ D Sbjct: 249 AGCVGIAQAALDAAVSYAARREQFGKPIAHHQLVQELIADISVDVDAARLLTWRVADLID 308 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + + E++ A++ A + A + A++ GG GY++E + R++ + Sbjct: 309 RGRPFATESSTAKLFA-------SEAAVRAASNALQVHGGYGYVDEYPAGKLLRDARVMT 361 Query: 442 ILLGS 446 + G+ Sbjct: 362 LYEGT 366 >gi|110834963|ref|YP_693822.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110648074|emb|CAL17550.1| acyl-CoA dehydrogenase, putative [Alcanivorax borkumensis SK2] Length = 598 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 73/341 (21%), Positives = 143/341 (41%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ ++ + T + + PK+ S E+ T + LTE G+ Sbjct: 125 MYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTGT-------------MCLTEPSCGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ + ++ + DG Y ++G K F+S+ D I+LA++ G + F+V Sbjct: 172 DLGILKTKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIV 231 Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + DG+ N + +++K+G +++AT + F G+L+G N + Sbjct: 232 PKFMTDGNGSVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG--------GILIDQPVMKRAIAD 361 L +AI V+ + + YA+ R +SG +I P ++R + Sbjct: 292 NFARLGTAIQGVAHAEIGFQGGLTYAKERLAMRSLSGPKNPEGPADPIIVHPDVRRMLLT 351 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415 AL + A D+ K +EAA ++ PI K + + Sbjct: 352 SKAFAEGGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVTETGLEAANHG 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R++ +++ G+ LD+L Sbjct: 412 VQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLG 452 >gi|327482496|gb|AEA85806.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 592 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 36/315 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251 LTE GTD+ I ++ + +DG Y +SG K F++ ++D I L A Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGS 225 Query: 252 R-VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 R + FLVP++L +DGS N L +++K+G +++AT + F G+++G+ N Sbjct: 226 RGISLFLVPKVLVNDDGSLGERNSLSCGSIEHKMGIQASATCVMNFDGATGWMVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAQDKAADPIIVHP 345 Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 ++R A+ + ++ AL +A D+ +R A ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVALQLDIAKFSDDEAARQLAEAQVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG G+I E + R+ I G+ LD++ ++ G ++ Sbjct: 406 GLETTVHGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMY 465 Query: 466 EQLFSTLEQDLGSSG 480 + + + S+G Sbjct: 466 QAFVDEIRAFVASAG 480 >gi|167033807|ref|YP_001669038.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166860295|gb|ABY98702.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 592 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + LTE GTD+ I ++ + I++G Y +SG K F++ D + Sbjct: 154 PMYQGRWTGSMCLTEPHAGTDLGLIRTRAEPIAEGCYRISGTKIFITGGEQDLTENIIHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP++L D G N + +++K+G +++AT + F Sbjct: 214 VLARLPDAPAGPKGISLFLVPKVLVDADGALGEANAVSCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGIL 349 G+L+G+ N + M L I ++ S AI YAR R +G Sbjct: 274 ATGYLVGEPNKGLNAMFTMMNYERLGVGIQGLALGERSYQGAIAYARDRLQGRAPTGAEA 333 Query: 350 IDQ--------PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------I 395 + Q P ++R + + A S +A D AK + AA A+ + Sbjct: 334 LAQHADPIVVHPDVRRMLLTMKALNEGGRAFSTYVALQLDLAKYSDDLAACAKAEAKVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + M + +GG GYI E + R+ I G+ LD++ Sbjct: 394 LTPVAKAFLTDMGLETTVHGQQVLGGHGYIREWGQEQLIRDCRITQIYEGTNGIQALDLV 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|104784029|ref|YP_610527.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95113016|emb|CAK17744.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 601 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 87/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQETYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G NG+ L++K+G NAT + F G+L+G N + Sbjct: 233 PKFLPNAEGGVGERNGVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + R + A + PI K + ++ Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G G + ++ ++ G LT KI +A+ Sbjct: 473 KFCQ--GQEGNAATKEFVEPLAAINKEWGE---LTMKIGMAA 509 >gi|307595745|ref|YP_003902062.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550946|gb|ADN51011.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM 14429] Length = 387 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 32/274 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR---VG 254 LTE GTD AAI ++ ++ G + ++G K W +D +++ A+ E R + Sbjct: 126 LTEPCCGTDAAAIETRAER-RGGEWVINGRKIWITQGAYADIYLLFARTGPKEARHRAIT 184 Query: 255 CFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLV R G C + K +G R E++F++ ++GD +V E K Sbjct: 185 AFLVRR--------GDCVEVSKLEMMGMRGAGEAEVKFNDC---VVGDDDVLGKINEGFK 233 Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I ++ LD A + +SG+ V L+ EA+ +A+ R G LID ++ +AD+ + Sbjct: 234 IAMVTLDLARIGISGVAVGLSQGVLDEALEWAKTRTAFGKPLIDWEWIQFQLADMKAKLE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++++ A +D +++ ++ + A I K + +MA + + ++ +GG GY +E Sbjct: 294 IGRTVTYKAAWLYD-----NKDPSFI-LYASIAKLYTAQMAVEIARDGVQILGGFGYSKE 347 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R YR++ I G+ A + + +L +G Sbjct: 348 SFSERAYRDAKVLEIAEGTNEAQRIVIHRILARG 381 >gi|255320722|ref|ZP_05361899.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262380647|ref|ZP_06073800.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255302338|gb|EET81578.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262297595|gb|EEY85511.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 600 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ +DG Y +SG K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAVPNTDGSYAISGEKIFISAGEHDLAENIIHIVLARLPDAPAGT 225 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L DG+ NG+ L++K+G NAT L F GFL+G N Sbjct: 226 KGISLFIVPKFNLDSDGNIAERNGVVCSALEHKMGIHGNATCVLNFDQAKGFLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + +AI ++ S A+ YAR R + +I P Sbjct: 286 LNCMFTFMNSARIGTAIQGLAASEASYQGALAYARERLAMRSLAGPQHPELPADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 +++ + + + AL++ L+ D A+ + E + ++ PI K + + Sbjct: 346 AVRQMLLTQKVFAEGSRALAYYLSTYVDMAEFSNNEDEKEQAENKLALLTPIAKAFMTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 M+ GG GYI E + + R++ + G+ +D+L NLL Sbjct: 406 GVESAKHGMQIFGGHGYIAEHGMEQIARDARIACLYEGTTEIQAIDLLARKVIGSKGNLL 465 Query: 459 EKGTNLFEQL---------FSTLEQDLGSSGKKVITILRDSISLCKE 496 + T+ ++ FS Q L K+ + + RD + ++ Sbjct: 466 KALTDEIQEFTAQHQQHDKFSAQVQQLEQLVKEWLELTRDVVDKMQQ 512 >gi|332211989|ref|XP_003255101.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Nomascus leucogenys] Length = 432 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANV 223 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + L D GL + +NK+G R+++T L F N + + N+ Sbjct: 224 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIG 280 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 K I L+ + ++ + LA+ I Y + R G L D ++ +A +A Sbjct: 281 HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERVQFGRRLFDFQGLQHQVAHVA 340 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG G Sbjct: 341 TQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVG 393 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y ++ + +++R++ +I G+ N Sbjct: 394 YTKDYPVEKYFRDAKIGTIYEGASN 418 >gi|152987960|ref|YP_001349460.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150963118|gb|ABR85143.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 606 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 43/317 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ + + LTE + GTD+ + ++ + DG Y +SG K F+SS Sbjct: 143 TEEQKQTYLTPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202 Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D I+LA++ +G G F+VP+ L G NG+ L+ K+G ++ Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGAGGSLGPRNGVSCGALEKKMGIKA 262 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 +AT + F + GFL+G N + + +AI V+ ++ A+ YAR R Sbjct: 263 SATCVMNFDDATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322 Query: 344 ----VSG--------------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +SG G + + ++AIA+ A L+ + A+ + Sbjct: 323 SMRALSGTKEPGQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 S++A YAR + PI K ++ M+ GG GYI E + + R++ Sbjct: 380 TSDDAEYARWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439 Query: 440 NSILLGSGNAMVLDVLN 456 ++ G+ LD+L Sbjct: 440 ATLYEGTTGIQALDLLG 456 >gi|294676032|ref|YP_003576647.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294474852|gb|ADE84240.1| acyl-CoA dehydrogenase domain protein [Rhodobacter capsulatus SB 1003] Length = 591 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 55/391 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ + ++ + +DG Y ++G K F+S+ D ++LA+ G Sbjct: 161 MNLTEPHCGTDLGLLRTKAEPQADGSYKITGTKIFISAGDHDLAENIIHLVLAKAPGGGE 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ L + G+ N + ++++K+G +AT + + G+LLGDL+ Sbjct: 221 GTKGISLFIVPKFLVNADGSLGARNAVSVGKVEHKMGIHGSATCVMNYDGATGYLLGDLH 280 Query: 304 VSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351 + M ++ + L ++ + + +LA A + R V+G LI Sbjct: 281 KGMRAMFTMMNEARLGVGLQGYAVAEAAYQAALAYAKDRLQGRAVTGVANPAGPADPLIV 340 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKYWCCKMAP 409 P ++RA+ D + A A +F A D A + A I M P+ K + Sbjct: 341 HPDIRRALMDQKSFLEGARAFTFWGATLIDRAHGLQDAEAEGLISLMTPVIKGFLTDKGF 400 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 +A + GG GYIEE+ +++ R++ I G+ LD++ G L + Sbjct: 401 EACVQAQQVWGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLV-----GRKLAAE-- 453 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVF 529 GK ++ + CK G R AL ++ + AGM F Sbjct: 454 ---------GGKPLMGFFEMVKAECKAHDGDERMKPFTDALKVASKQMQAAGM-----FF 499 Query: 530 LENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560 L+N + L G ++ H++ + L Sbjct: 500 LQNA----AKNPDAALSGSYDFMHLMGHVCL 526 >gi|194366382|ref|YP_002028992.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194349186|gb|ACF52309.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 382 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 24/274 (8%) Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238 N+A QK AI G LTE + G+D A+ + K +DG + ++G K W S P Sbjct: 103 NEAQKQKYVRAIAEGEAIGAFALTEPQSGSDATAMRCRAVKQADGSFVINGKKSWITSGP 162 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 ++ ++ A E G + + D G + + K+G R++AT E+EF++ ++ Sbjct: 163 VAKYIVLFAMSEPDKGARGITAFMIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YV 219 Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352 +V E KI + LD+ + ++ + +A A I Y + R G + Sbjct: 220 AQAEDVLGQEGEGFKIAMGVLDAGRIGIASQAIGIARAAYEATIEYVKERKAFGAAIGTF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + IAD+ + AA L+ R A + K S EAA A++ A W + Sbjct: 280 QMTQAKIADMKCKLDAALLLTLRAAWVKGQGKRFSNEAAIAKLTASEAAMW-------IT 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY +E + R++R++ I G+ Sbjct: 333 HQAVQIHGGMGYSKEMPLERYFRDAKITEIYEGT 366 >gi|157375831|ref|YP_001474431.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318205|gb|ABV37303.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis HAW-EB3] Length = 596 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 38/292 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD+A + ++ + +G Y +SG K F+SS D A ++LA+ Sbjct: 162 MNLTESHAGTDLALLRTKAIEAGEGQYAISGEKIFISSGDHDLAENIAHLVLARLPDAPA 221 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + F+VP+ L EDGS N LC L++K+G N+T + F G L+GD Sbjct: 222 GVKG-ISLFVVPKFLINEDGSLGDANTLCATGLEHKMGIHGNSTCVMNFDGALGELVGDP 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------IL 349 + + M L + + ++ A+ YA+ R G IL Sbjct: 281 HQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRGLSGVKAPEMAADPIL 340 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS--EEAAYARIMA----PITKYW 403 + V + ++ + + A A+ + A DEA+ S E+A A +A PI K + Sbjct: 341 VHGDVRRMLMSQKSFN-EGARAMIGQQALWLDEAERHSDPEKAKMANKLAALFTPIVKGF 399 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +A + GG GYI E + + R+ + + G+ LD++ Sbjct: 400 VTDRGFNACVDAQQVFGGHGYIHEWGMEQFVRDIRISMLYEGTNGVQALDLV 451 >gi|147676350|ref|YP_001210565.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|147676848|ref|YP_001211063.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|147678104|ref|YP_001212319.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|146272447|dbj|BAF58196.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|146272945|dbj|BAF58694.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|146274201|dbj|BAF59950.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] Length = 379 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 19/277 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM K + LTE GTD A+ S + D Y L+G K F+S +P++ ++ A Sbjct: 113 PMCKGEILGSFALTEPGAGTDAASGQSTAVLVGDE-YVLNGTKMFISNAPVAGVLVIFAS 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + GL + NK+G R + T E+ + + N+ Sbjct: 172 TDKSKGAKGISAFIVPADAPGLQIGKHLNKMGIRGSLTAEVIMKDC---RIPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A E+I Y++ R G + ++ IA++ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQAALDESISYSKERVQFGKPISSFQAIQWMIANM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ AA L++ A +D+ + S+EAA AR+ A + A A++ GG Sbjct: 289 ATDVEAARFLTYYAAWCYDQGRPYSKEAAMARLFA-------SECAARHTNRAVQIHGGI 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458 GYI+ + R YR++ I G+ M + + NLL Sbjct: 342 GYIKGHKVERLYRDAKITEIYEGTNEVMRMVIAGNLL 378 >gi|312199133|ref|YP_004019194.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311230469|gb|ADP83324.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 386 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 37/269 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250 GLTE G+D A+I +Q ++ +G + ++G K F++ +P+S +LA + Sbjct: 123 FGLTEPTAGSDAASIRTQARR-DNGGWLINGTKMFITNAGTPISLGVTILAVTGVSDDGK 181 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 R G F +P DG+P G K+G + T EL F + + L+G+ Sbjct: 182 KRYGTFFIP----DGTP-GYEKGNALRKLGWHAMDTRELVFRDCWIPDDHLIGEEGNGL- 235 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + L LD +SV+ + +SLA+ A+ +A R G L + +AD+ Sbjct: 236 ----RQFLEVLDGGRISVAALGLSLAQTALDLALRHANEREQFGSKLSRFQAIGHKLADM 291 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I A AL +R A D+ + S+EAA A++ + ++A + +++ GG Sbjct: 292 ATEIEAGRALVYRAAWLGDQGRPFSKEAAMAKL-------YTSELANRAASASVQIHGGY 344 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 GY+ E +I+R Y + A + +G G + + Sbjct: 345 GYVRESAISRFY--ADAKVLEIGEGTSEI 371 >gi|307296093|ref|ZP_07575924.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306878264|gb|EFN09486.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 576 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/334 (22%), Positives = 148/334 (44%), Gaps = 41/334 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD+A + ++ +DG Y ++G K F+SS D ++LA+ Sbjct: 161 MALTESGAGTDLALLKAKAVPDADGGYAVTGQKIFISSGDHDFGGNIIHLVLARLPDAPA 220 Query: 249 -VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+ L D N + L+ K+G + T + + G+L+G+ Sbjct: 221 GVKG-ISLFLVPKYLPDADGNFTVRNAMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEP 279 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGG----ILID 351 + + M ++ + ++ + G+ ++ A A + R G +I+ Sbjct: 280 HRG---LAAMFTMMNAERLMVGIQGLGIAGAAYQQAAGYAKERLQGRSADGTREPVAIIE 336 Query: 352 QPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 ++R + +I A + TAL A+ ++A R++ ++ P+ K Sbjct: 337 HADVRRMLLNIRAFVEGARALGGWTALQLDRAHHHEDAAERAKADGLVALLTPVVKAAFT 396 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 +A + GG GYI E + ++ R++ I G+ +D++ L G Sbjct: 397 DYGFESAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMAGGA 456 Query: 464 LFEQLFSTLEQDLGSSGKKVITI-LRDSISLCKE 496 + E F+ + DLG++G I + R++++L +E Sbjct: 457 VVEGFFALVADDLGAAGASGIAVSTREALALLRE 490 >gi|292653659|ref|YP_003533557.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] gi|291369845|gb|ADE02073.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] Length = 381 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/276 (21%), Positives = 129/276 (46%), Gaps = 39/276 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ +G ++E + G+D+++I +Q ++ D + ++G+K W + + D F++L + Sbjct: 112 PVATGEAIMGAAISEPQAGSDVSSIATQAERDGDK-WVINGNKMWITNGSVGDYFVVLCE 170 Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 E R G F +++ + +G +++ K+G R++ T EL +L D+ V Sbjct: 171 TNPDAERRHGGF--SQIIVESDRDGFDAEKITGKMGMRASDTAEL--------ILNDVRV 220 Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 P E++ + + + D V+ + +A A+ YA+ R G L Sbjct: 221 ---PAENLVGEVDGGFYQQMQFFDETRTMVAAQALGIARGAAERALEYAQEREQFGQTLS 277 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++ +A++ +I AA L+++ +E ++ + K + ++A Sbjct: 278 GFQAIQHKLAEMFTNIEAARQLTYKATWGVEEGHDDDTS------LSSMAKEFASRVAVD 331 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V EA++ GGSGY+ + + R YR++ + I G+ Sbjct: 332 VTNEAVQIHGGSGYVNDFDVERFYRDAKISQIYEGA 367 >gi|258541668|ref|YP_003187101.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256632746|dbj|BAH98721.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256635803|dbj|BAI01772.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-03] gi|256638858|dbj|BAI04820.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-07] gi|256641912|dbj|BAI07867.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-22] gi|256644967|dbj|BAI10915.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-26] gi|256648022|dbj|BAI13963.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-32] gi|256651075|dbj|BAI17009.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654066|dbj|BAI19993.1| acyl-CoA dehydrogenase [Acetobacter pasteurianus IFO 3283-12] Length = 380 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 21/271 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 +TE GTD++ I + K +G G W ++P++D +LA+ + G + Sbjct: 121 ITEPEAGTDVSGIRTTAVKDGEGWVLNGGKIWIHNAPVADIGFVLARTDKEAGNRGMSIF 180 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYL 318 + D G+ ++K+G R++ L+F + LLGD+N ++ L Sbjct: 181 IVDLHAKGVERGPKEHKMGQRASQVGALDFQDVRLGPNALLGDMNRGF-----HMMMSVL 235 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D + ++ + V +A+ A+ YA R G + + ++ +AD+A DI AA L Sbjct: 236 DKGRVGIASLAVGIAQAGLEAAVEYAGTRKQFGKHISEFQGVQWLLADMAKDIEAARLLV 295 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D + + A K + MA A A+A++ GGSGYI + R Sbjct: 296 YAAAMKIDHGLDATRSCSMA-------KCFAGDMAVARTADAVQVFGGSGYIRGFEVERL 348 Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTN 463 YR++ I G+ + + LL+KG Sbjct: 349 YRDAKITQIYEGTNQIQRMIIARELLKKGAT 379 >gi|146308834|ref|YP_001189299.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145577035|gb|ABP86567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 590 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 34/311 (10%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S + T PM + A + LTE GTD+ I ++ + +DG Y ++G K F++ Sbjct: 144 SEDLKTTYLPPMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYKVTGSKIFITGGE 203 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRS 283 D ++LA++ + FLVP+++ +DGS N + +++K+G ++ Sbjct: 204 QDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVMVNDDGSLGARNAVSCGSIEHKMGIKA 263 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342 +AT + F G+L+G++N + M L I + S A+ YAR R Sbjct: 264 SATCVMNFDGATGYLIGEVNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAVSYARERI 323 Query: 343 ------------HVSGGILIDQPVMKRAIADIALD-----IAAATALSFRLANSFDEAKS 385 V+ I++ V + + AL+ A LA ++A Sbjct: 324 QSRAATGPVNHDKVADPIIVHADVRRMLLTMKALNEGGRAFACYVGQQLDLAKYAEDASE 383 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 R A ++ P+ K + + GG GYI E + R+ I G Sbjct: 384 RQNAEALVALLTPVAKAFFTDTGLESCVHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEG 443 Query: 446 SGNAMVLDVLN 456 + LD+L Sbjct: 444 TNGIQALDLLG 454 >gi|301167941|emb|CBW27527.1| acyl-CoA dehydrogenase [Bacteriovorax marinus SJ] Length = 343 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 52/312 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +S S S S++A K + P + S E +A L+E G+D Sbjct: 49 LSVSTMSQSILAEFGNEEQKKKYLPALTSGE------------EIA-AFALSESHSGSDA 95 Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268 AA+ + +K+ G Y L+G K W S ++ +I++A+ EG G + ++ DG+ Sbjct: 96 AALKTTAKKVEGG-YILNGTKMWITSGGIAKTYIVMARTGEEGHKG--ISAFIVRDGA-E 151 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------KI-LIYLD 319 G Y + +NK+G + + T EL F N F P ED+ KI L LD Sbjct: 152 GFSYGKKENKMGWKVSPTRELVFENCFV-----------PEEDLLQTEGMGFKIALSALD 200 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 +++ + V LA EA+ YA R + D ++ + D+A ++ + L Sbjct: 201 RGRITIGSIAVGLAQRALDEAVKYALDRKQFNQAIFDFQGLQFMMTDMATEVECSRLLVE 260 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A +FD + A A++ A T A V +A++ +GG GY E + R Sbjct: 261 EAARNFDNGIKNQKVACMAKLKATDT-------AMKVTTDAVQVLGGVGYTSEYPVERFM 313 Query: 435 RESPANSILLGS 446 R++ I+ G+ Sbjct: 314 RDAKVLQIVEGT 325 >gi|33595598|ref|NP_883241.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565676|emb|CAE40324.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 597 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 49/327 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 +AP++ S E+ T + LTE + GTD+ + ++ + DG Y +SG K Sbjct: 152 YAPRLASGEWTGT-------------MCLTESQAGTDLGLLRTRAEPDGDGAYRISGSKM 198 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F+SS D ++LA++ + F+VP+ L D G NG+ +++ Sbjct: 199 FISSGEHDLASNIVHMVLARLPDAPAGTRGISLFVVPKRLPDAQGEPGERNGVYCDAIEH 258 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +NAT L F N G+L+G+ N + M L + ++ +L +++ Sbjct: 259 KLGLHANATCVLRFENARGYLVGEPNKGLAAMFVMMNSARLGTGAQALGLTETALQKSLA 318 Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381 YA R S +I QP ++R + A + LA D Sbjct: 319 YAAERLQSRAPGHEKAITRADPIILQPDVRRMLLTQQAWAQGARMFLYWLALQIDTELHA 378 Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 + R ++ P+ K + A + A++ GGSGYI E I + R+ Sbjct: 379 ADPAERDRAGGLLSLLTPVAKAFVSDNAVESVNLAVQVHGGSGYIVESGIEKTLRDVRIL 438 Query: 441 SILLGSGNAMVLDVLN---LLEKGTNL 464 I G+ D+L L ++G L Sbjct: 439 PIYEGTNGVQAHDLLARKVLADQGARL 465 >gi|237802424|ref|ZP_04590885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025281|gb|EGI05337.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 592 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTRAEPQADGTYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +D GS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSVGSRNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYALDRLQSRAPTGAQNKEKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK +E A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSPDEVARKRADDLVALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAFY 465 Query: 467 QLFS 470 Q+FS Sbjct: 466 QVFS 469 >gi|94969498|ref|YP_591546.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis Ellin345] gi|94551548|gb|ABF41472.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis Ellin345] Length = 597 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 33/275 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 L+E G+D ++ +DG Y L+G K W ++ +D +I+ A+V+G + F+V Sbjct: 153 LSESTSGSDAMNPRTKAVLAADGKHYVLNGEKMWITNANFADLYIVFAKVDGEKFTAFIV 212 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 + G + K+G R ++T L ++ LLG+ + G + IL Sbjct: 213 EKTFP-----GFSVGAEEKKLGIRGSSTAPLILNDCQVPVENLLGE--IGKGHIIAFNIL 265 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A V G R L+ I YA++R G ++ D +++ +A I I A Sbjct: 266 NIGRFKLGAA--CVGGARNILSHTIAYAKQRKAFGKVIADFGLIREKLAQIVAGIYTGEA 323 Query: 372 LSFRLANSFDEA-----KSRSEEAAYAR-------IMAPITKYWCCKMAPAVIAEAMECI 419 + +R D A K +EE+ R + I K W +M + E ++ Sbjct: 324 MVYRTVGMMDVALGEVEKGGAEESKETRKAIEEYAVECSIIKVWASEMLDMAVDETVQVY 383 Query: 420 GGSGYIEERSIARHYRESPANSILLGSG--NAMVL 452 GG G++EE R YR+S N I G+ N M++ Sbjct: 384 GGYGFVEEYPAERAYRDSRVNRIFEGTNEINRMII 418 >gi|262376444|ref|ZP_06069673.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter lwoffii SH145] gi|262308583|gb|EEY89717.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter lwoffii SH145] Length = 600 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y +SG K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAVPNEDGSYSISGEKIFISAGEHDLAENIVHIVLARLPDAPAGT 225 Query: 253 --VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L E G S NG+ L++K+G NAT L F N GFL+G N Sbjct: 226 KGISLFIVPKYNLDEAGNVASRNGVVCSALEHKMGIHGNATCVLNFDNAKGFLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP----VMKR 357 + + +AI ++ S A+ YA+ R + G QP ++ Sbjct: 286 LNCMFTFMNSARIGTAIQGLAAAESSYQGALAYAQDRLAMRSLEGAKAPGQPADPIIVHP 345 Query: 358 AIADIALD----IAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 A+ ++ L + AL++ LA D EA EE A ++ PI K + Sbjct: 346 AVRNMLLTQKVFAEGSRALAYYLATYADIAEATDSPEEKKAAEDRLALLTPIAKALMTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M+ GG GYI E + + R++ S+ G+ +D+L Sbjct: 406 GIEAAKHGMQIFGGHGYIAEHGMEQIARDARIASLYEGTTEIQSIDLL 453 >gi|197295451|ref|YP_002153992.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|195944930|emb|CAR57542.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 596 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALLA 467 Query: 471 TLEQDLGSSGK 481 + + + GK Sbjct: 468 EIGDTVTALGK 478 >gi|221069550|ref|ZP_03545655.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714573|gb|EED69941.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 386 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W P++ + E V LTE G+D A++ + K D Y Sbjct: 102 TPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K F++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIV-----DARSAGISFGKYDRKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ A ++V + L Sbjct: 203 GQRGAHTCDVIFDNVKVPVANLIG-LQEGKGFKTAMKVLEKGRIHI--AAVAVGCAKRIL 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + D +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 RDALQYALERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGGNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GGSGY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGSGYMSEYGIERFYRD 356 >gi|325271496|ref|ZP_08138014.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324103386|gb|EGC00715.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 592 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 40/344 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + EDGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFMVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405 ++R + + I A S +A D AK RSEE ++ P+ K + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDPGVRKRSEE--LVALLTPVAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 + + GG GYI E + R+ I G+ LD++ ++ G Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGA 463 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507 + + Q + S+G ++ R + + GL ++ ++ Sbjct: 464 YYTLFSDEIRQFMASAGSELDEFTRPLGAALGQLDGLTEWVLQQ 507 >gi|76802143|ref|YP_327151.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160] gi|76558008|emb|CAI49593.1| acyl-CoA dehydrogenase 6 [Natronomonas pharaonis DSM 2160] Length = 384 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 133/280 (47%), Gaps = 45/280 (16%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP+ G ++E G+D+++++++ +K D + ++G+K W + + D F++L Sbjct: 111 APIATGDAICGAAISEPDTGSDVSSVSTRAEKDGDE-WVINGNKMWITNGSVGDFFVVLC 169 Query: 248 QV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + EGR F +++ + +G ++ K+G R++ T EL +L D+ Sbjct: 170 KTDPDAEGRYNGF--SQIIVESDRDGFEADKITGKLGIRASDTAEL--------ILDDVR 219 Query: 304 VSTGPVED---------MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349 V P E+ ++ + + D V+ V +A+ A+ YA+ R G + Sbjct: 220 V---PEENLVGTEGMGFLQQMQFFDETRTGVAAQGVGIAKGAAERALEYAQEREQFGRPI 276 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 D ++ +AD+ ++ AA L+++ A S D A + + +A + K + ++A Sbjct: 277 GDFQAIQHKLADMHTNVEAARNLTYKSAWSVDNADGQLTK------LASMAKEYASRVA- 329 Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRESPANSILLGS 446 + A EC+ GGSGY+++ R +R++ I G+ Sbjct: 330 --VENANECVQIHGGSGYVDDFDAERFFRDAKITQIYEGT 367 >gi|172040286|ref|YP_001800000.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109] gi|171851590|emb|CAQ04566.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109] Length = 389 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 + +TE G D+A I + + DG + ++G K F+S+ + F ++ + +GR G Sbjct: 130 IAMTEPEAGADLAGIRTLARDNGDGSFTVNGAKTFISNGVQADFTIIVAITDPEKGRAGI 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L+ ++EDG LK K+G +S T EL F N LLG+ G + Sbjct: 190 SLL--IVEDGMEGYTKTGPLK-KVGLKSQDTAELSFENVQVPAENLLGERGAGFGYLRHN 246 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ SV+ R + +++ R G L+D + +A + + AA + Sbjct: 247 LAQERLSIAVGSVATSRRAFDLVYQHSQDRKTFGNRLVDHQAYRWELAKMVQGLQAAQSF 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ EAK + E A + KY ++ V+ +A++ GG G++ E IA Sbjct: 307 ----VDACIEAKVKGE---LDETTAAMAKYHTTELQIEVVNQALQMHGGYGFMMEYPIAT 359 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461 HY +S I G M+ + L KG Sbjct: 360 HYLDSRVQPIYGGPNEIMLEIISRKLAKG 388 >gi|153939781|ref|YP_001392633.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str. Langeland] gi|152935677|gb|ABS41175.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str. Langeland] Length = 377 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 16/263 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGAVATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG++N Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227 Query: 306 TGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + MK L + A ++ + ++ EA+ YA++R + ++ +A++ Sbjct: 228 KGFITAMKTLSVGRIGVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANME 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L + A D + +EA+ A KY+ + A ++ +A++ GG G Sbjct: 288 TKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGGYG 340 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI++ I R YR+ +I G+ Sbjct: 341 YIKDYKIERLYRDVRVIAIYEGT 363 >gi|171318080|ref|ZP_02907250.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171096759|gb|EDT41643.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 596 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGG-----ILIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R V G +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERIQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDVAHRHSDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|111020379|ref|YP_703351.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819909|gb|ABG95193.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 380 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+T + ++G Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALTCKASA-TEGGYVVNGAKAWITHGGIADFYNLFARTGEGSKGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VP+ E GL + + + K+G + T + + F + + + Sbjct: 186 VPKDTE-----GLTFGKPEEKMGLHAVPTTSAHYDDAF--VPAERRIGAEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA EA+ YA+ R G +ID + +AD+A + +A Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYAQERTAFGKKIIDHQGLGFLLADMAAAVDSAR-- 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ +GG GY + + R Sbjct: 297 ----ATYIDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVER 351 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 352 YMREAKITQIFEGT 365 >gi|226941183|ref|YP_002796257.1| acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] gi|226716110|gb|ACO75248.1| Probable acyl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] Length = 619 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249 LTE GTD+ + ++ + +DG Y ++G K F+S+ +SD I L V Sbjct: 191 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFISAGEHDLSDNIIHLVLARMPDSPKDV 250 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G + F+VP+ LEDGS N + L++K+G ++NAT + G+L+G+ N + Sbjct: 251 KG-ISLFIVPKFLEDGSRNPVSCGALEHKMGIKANATAVINLDGAKGWLIGEKNKGLACM 309 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQPV--------MKR 357 M L + + S A+ YA+ R ++G D+P ++R Sbjct: 310 FTMMNAARLGCGMQGLGIGEASFQGALAYAKERLQMRALNGPACPDKPADPIIVHPDVRR 369 Query: 358 AIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYAR-----IMAPITKYWCCKMAPAV 411 + A AL+ LA D E KS + A ++ P+ K + Sbjct: 370 MLMTQKAYTEAGRALTAFLALQLDIEEKSTDDAARQDAADTVALLTPVAKAFMTDNGFLA 429 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + + R+ + + G+ +D+L L+++G L Sbjct: 430 ANMGVQVFGGHGFIREWGMEQLVRDCRISQLYEGTNGIQAIDLLGRKVLMDQGAKL 485 >gi|145579859|pdb|2JIF|A Chain A, Structure Of Human Short-Branched Chain Acyl-Coa Dehydrogenase (Acadsb) gi|145579860|pdb|2JIF|B Chain B, Structure Of Human Short-Branched Chain Acyl-Coa Dehydrogenase (Acadsb) gi|145579861|pdb|2JIF|C Chain C, Structure Of Human Short-Branched Chain Acyl-Coa Dehydrogenase (Acadsb) gi|145579862|pdb|2JIF|D Chain D, Structure Of Human Short-Branched Chain Acyl-Coa Dehydrogenase (Acadsb) Length = 404 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V+ +G + Sbjct: 148 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 206 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 L D GL + +NK+G R+++T L F N + + N+ K I L+ Sbjct: 207 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENV---KVPEANILGQIGHGYKYAIGSLN 263 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + LA+ I Y + R G L D ++ +A +A + AA L++ Sbjct: 264 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 323 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + K +EA+ A KY+ ++A ++ +E +GG GY ++ + +++ Sbjct: 324 NAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYF 376 Query: 435 RESPANSILLGSGN 448 R++ +I G+ N Sbjct: 377 RDAKIGTIYEGASN 390 >gi|163755824|ref|ZP_02162942.1| tryptophan synthase subunit beta [Kordia algicida OT-1] gi|161324345|gb|EDP95676.1| tryptophan synthase subunit beta [Kordia algicida OT-1] Length = 388 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 16/264 (6%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251 T IG L +TE GG+D+A + + K D Y ++G K F+++ + SD ++ A+ Sbjct: 118 TGEKIGCLCITEPFGGSDVAGMRTTAVKKGDK-YIINGSKTFITNGVYSDYLVVAAKTNP 176 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 +G + + D G+ +L +K+G +++ T E+ F N L+G+ N+ Sbjct: 177 ELGNKGISIFIMDRDTPGISATKL-DKLGWKASDTGEIAFDNVEIPIENLMGEENMGFPY 235 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L L AI + + ++ + Y R G + ++ +AD+A ++ Sbjct: 236 IMQHFALERLIMAINAHARAEFAIEYTLQYMSERQAFGRTIDKFQALRHTMADLATEVEV 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 ++ +A+ D+ + +EA +++ + KMA VI + ++ +GG GY+EE Sbjct: 296 CKTFNYAVASRLDKKEYVVKEATMSKLQS-------TKMADNVIYQCLQMLGGYGYMEEY 348 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 +AR R+S I G G + +L Sbjct: 349 PLARMLRDSRLGPI--GGGTSEIL 370 >gi|134291066|ref|YP_001114835.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134134255|gb|ABO58580.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 596 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + A +A A +A+ + +R+ A + PI K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHADDATRTRHQAIYEYLVPIVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR+ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDGRILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 ++ + + GK Sbjct: 468 EIDATVAALGK 478 >gi|221640200|ref|YP_002526462.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides KD131] gi|221160981|gb|ACM01961.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides KD131] Length = 562 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + + DG Y ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 + +D ++LA++ +G G FLVP+ L D G N + L+ K+ Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337 G + T +++ G+L+G + + M + + + V+ A A Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395 RR+ GGI I+ ++R +A + + +A A++ A + D A + E A A + Sbjct: 317 IERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAV 375 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + + V + ++ GG+G+IE A+ R+ +I G+ +D++ Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435 Query: 456 N--LLEKGTNLFEQL 468 +++ G F L Sbjct: 436 GRKMMDGGEAAFRLL 450 >gi|24373942|ref|NP_717985.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] gi|24348377|gb|AAN55429.1|AE015680_4 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] Length = 585 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 41/319 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK++S E+ A + +TE + G+D+ I ++ DG Y +SG K Sbjct: 151 YLPKLYSGEW-------------AGAMDMTEPQAGSDLRNIRTRAVPQEDGSYAISGSKI 197 Query: 234 FLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGN 281 F++ D ++LA++ G FLVP++ + G NG+ +++K+G Sbjct: 198 FITGGDHDLTENVIHLVLAKLPESKGISLFLVPKITVNKDGCLGGTNGVSVGSIEHKMGL 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + +AT + F G+L+G+ N + M L I + + + A YA+ Sbjct: 258 KGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMATDYAKE 317 Query: 342 RH---VSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-----S 385 R +GG +I ++R + I A ALS D AK Sbjct: 318 RSQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLAKYAQDDV 377 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 +++ A Y ++ P+ K + A + GG GYI E + + R++ I G Sbjct: 378 KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRETGVEQLVRDTRIAQIYEG 437 Query: 446 SGNAMVLDVLNLLEKGTNL 464 + +D L G NL Sbjct: 438 TNGIQAIDFLGRKVTGDNL 456 >gi|154339806|ref|XP_001565860.1| isovaleryl-coA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063178|emb|CAM45378.1| putative isovaleryl-coA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 410 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 43/306 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P W PK+ + E+ +G +G++E GTD+ + + +K S G Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPGAGTDVLGMQTTAKKDSFGN 180 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + ++D +++ A+V G++ F+V R ++ G +K G R++ Sbjct: 181 YVLNGSKIWITNGTVADVYLIYAKVNGKITAFVVERGMK-----GFTQGPKIDKCGMRAS 235 Query: 285 ATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335 +L F + L GD G + ++++ ++++GM V +AE Sbjct: 236 HMCQLFFEDVVVPAENLLGGDGKGMVGMMRNLEL------ERVTLAGMAVGIAERSVELM 289 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 YA +R G + + ++R IA+ D AA AL + ++++ R+ Sbjct: 290 TSYASQRKAFGHPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNQN-------RL 342 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + +A V A++ +GG GY ++ + R +R++ I G+ A ++ Sbjct: 343 GSDAAKLFATPIAKKVADSAIQVMGGMGYTQDMPVERLWRDAKLLEIGGGTIEAHHKNIA 402 Query: 456 NLLEKG 461 L KG Sbjct: 403 KDLLKG 408 >gi|26988773|ref|NP_744198.1| acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440] gi|24983569|gb|AAN67662.1|AE016396_4 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440] Length = 616 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 31/284 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ Q +DG Y ++G K F+S ++D + L A V Sbjct: 187 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 246 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307 G + FLVP+LL G N L L++K+G + +T + F G+L+G+ N Sbjct: 247 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACM 305 Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353 + D + + L ++ + + LA A + R ++G + ++P Sbjct: 306 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 365 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + ++ + + + TA L ++ A +R A A ++ PI K + + V Sbjct: 366 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 425 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ GG GYI E + + R+S + G+ LD++ Sbjct: 426 ASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 469 >gi|85112132|ref|XP_964284.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] gi|28926060|gb|EAA35048.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] Length = 482 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 25/265 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K+ G Y L+G K W + P +D ++ A+ E G + Sbjct: 211 LAMSESGSGSDVVSMRTTAKKVEGGGYKLNGSKMWITNGPDADVIVVYAKTEPDAGSKGI 270 Query: 259 PRLLEDGSPNGL------CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 + + +G+ C ++L +K+G R + T EL F N F +LG +N G V Sbjct: 271 TAFIVETKKDGVKAEGFECLRKL-DKMGMRGSNTGELVFENVFVPEENVLGKVN---GGV 326 Query: 310 EDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + L+ ++S M+ +L A+ YA R G + +++ +AD+ + Sbjct: 327 RVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHSRKQFGTPIAHFQLLQGKLADMYTKL 386 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A ++ A + DE + I+ + + A V +A++ +GG GY+E Sbjct: 387 QASRAYTYATAKTVDEQGVIKTQDCAGAIL------YAAERATEVALDAIQILGGMGYME 440 Query: 427 ERSIARHYRESPANSILLGSGNAMV 451 E ++R R++ I G+G + V Sbjct: 441 EMPVSRIMRDAKLYEI--GAGTSEV 463 >gi|108757986|ref|YP_631942.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108461866|gb|ABF87051.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 381 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 33/285 (11%) Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 ++F + P T +G GLTE G+D +++ + + DG + L+G K F+ Sbjct: 99 RVFGSDAQRQKYLPKLATGEYLGAWGLTEPGSGSDASSMKTTAMRKGDG-WVLNGAKMFI 157 Query: 236 S-SPMSDAFIMLA-----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + + D F++LA + + + FL LE G P G + + K+G RS+ T EL Sbjct: 158 TQGTVGDVFVVLAVTSPQKRQKGITAFL----LEKGLP-GFSQRAIHGKLGMRSSDTAEL 212 Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARR 341 N +G+L+ G ++ MKIL D +++ + R +L E+I Y+R Sbjct: 213 VLENVEVPDSARVGELD--HGFIDTMKIL---DRGRITIGALAVGLGRGALEESIGYSRE 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + ++ +AD+ ++ AA L R A DE K S EA+ ++ A Sbjct: 268 RTAFGQPISEFQGLRWMMADMKTELDAARLLVHRAAKLADEGKPYSREASMGKLFASEAA 327 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 C +A++ GG GY E + R+ R++ I G+ Sbjct: 328 MRACN-------KAVQIHGGYGYTREFPVERYLRDAKLCEIGEGT 365 >gi|15596481|ref|NP_249975.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|313106269|ref|ZP_07792514.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|9947219|gb|AAG04673.1|AE004558_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|310879016|gb|EFQ37610.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 606 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 43/317 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T AP+ + + LTE + GTD+ + ++ + DG Y +SG K F+SS Sbjct: 143 TEEQKQTYLAPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202 Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D I+LA++ +G G F+VP+ L G NG+ L+ K+G ++ Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 +AT + F GFL+G N + + +AI V+ ++ A+ YAR R Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322 Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +SG DQ + ++AIA+ A L+ + A+ + Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +++A Y R + PI K ++ M+ GG GYI E + + R++ Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439 Query: 440 NSILLGSGNAMVLDVLN 456 ++ G+ LD+L Sbjct: 440 ATLYEGTTGIQALDLLG 456 >gi|66557634|ref|XP_623170.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial [Apis mellifera] Length = 408 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 25/264 (9%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251 T IG L+E G+D A ++ K++ Y ++G K W ++ SDA I+ A + Sbjct: 140 TGTKIGCFALSEPGNGSDAGAASTIA-KLNGSNYLINGTKSWITNAYESDAIILFATTDK 198 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 + + D + GL + ++K+G ++T L F + LLG+ + Sbjct: 199 SKKHKGISAFIVDKTTEGLFVGKKEDKLGICGSSTCSLIFEDCKLPKENLLGESGMG--- 255 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 KI + LD+ + ++ + +A+A I YA +R G +I +++ IAD+ Sbjct: 256 ---FKIAMTTLDAGRIGIAAQALGIAQASLDCAIEYAAKRQAFGSSIIKLQTIQQKIADM 312 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +L + ++ L++R A D KS ++EAA A++ + T +C + M+ +GG Sbjct: 313 SLRLESSRLLTWRAAALKDNNKSYTKEAAMAKLSSSETSTFCAH-------QCMQILGGM 365 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY+ + R+YR++ I G+ Sbjct: 366 GYVSDMPAERYYRDARITEIYEGT 389 >gi|167752047|ref|ZP_02424174.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216] gi|167660288|gb|EDS04418.1| hypothetical protein ALIPUT_00289 [Alistipes putredinis DSM 17216] Length = 577 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 29/293 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFL 257 + LTE G+D+ A+ + G + L+G K F+++ ++LA+ E G Sbjct: 173 MDLTEPDAGSDLGAVMLKATYDEKSGRWLLNGVKRFITNGDGHISLVLARTEEGTSDARG 232 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + L+ D G+ +R++NK+G + + T EL F+N L+GD + G ++ ++ Sbjct: 233 LSMLVHDKRDGGVKVRRIENKLGIKGSPTCELVFTNAPARLVGDRKM--GLIK--YVMSL 288 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +++A + + V L EA + YA+ R G +I + ++++ + A AL Sbjct: 289 MNAARLGIGAQSVGLCEAAYREALKYAQERAQFGKPIIQFAAVAEMLSNMKAKLQGARAL 348 Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 + + E + R E Y R+ P+ K + + A + +A Sbjct: 349 LYETTRFVEIYKQYGHIAQERSLEPEERQEMKFYNRLADGFTPLVKLFASEYANQLAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 ++ GGSG++++ R YR++ +I G+ V+ +N + KGT EQ+ Sbjct: 409 VQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINAVTKGT-FLEQI 460 >gi|332141164|ref|YP_004426902.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551186|gb|AEA97904.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] Length = 586 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 40/322 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD++ ++++ + DG Y ++G+K F+++ D ++LA+ Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYMITGNKIFITAGDQDWSSNVIHLVLARLPDAPK 221 Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+ L D G N L +++K+G +++ T + F G+L+G+ Sbjct: 222 GVKG-ISLFLVPKFLPDANNEPGEANTLSVGSIEHKMGIKASPTCVMNFDGAKGYLVGEE 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350 N + M + + S A+ YAR R S GI ++ Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPDGKADPIV 340 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCC 405 QP + R + I ALS A D E + + + + + PI K + Sbjct: 341 FQPDVARMLLTQKSLIEGCRALSLFYAKFMDVEKLGEGQEKEDAEKILQFLTPICKAFMT 400 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTN 463 M + ++ GG G+I E + + R+ + G+ LD++ L G Sbjct: 401 DMGLETTSLGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460 Query: 464 LFE---QLFSTLEQDLGSSGKK 482 + E + FS L D+ S K Sbjct: 461 MMEATYKAFSALVGDIQDSEAK 482 >gi|207743723|ref|YP_002260115.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|206595122|emb|CAQ62049.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 594 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ M+D + +LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + A AL++ A ++ D+A + EA Y + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|86751552|ref|YP_488048.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86574580|gb|ABD09137.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 593 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 48/352 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249 LTE + G+D+ A+ ++ ++ +DG Y + G K F++ M+D + A Sbjct: 163 LTEPQAGSDVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGT 222 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 +G + FL+P+ L + G+ N + +++K+G ++ T ++ + G+L+G+ Sbjct: 223 KG-ISLFLIPKFLVNADGTLGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGE 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID----QPVMK- 356 N + M L + V + +A+ YA+ R I D P++K Sbjct: 282 ENRGMQCMFTMMNQARLGVGLEGVGIADRAYQQALAYAQERKQGRAIGSDSKGSDPIIKH 341 Query: 357 ----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 RA+ A I +TA++ +A + K ++ AA A ++ PI K + Sbjct: 342 PDVKRTLLLMRALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTN 463 + V + ++ GG G+IEE A+HYR++ I G+ +D++ + G + Sbjct: 402 IGTEVASLGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGAS 461 Query: 464 LFEQL--FSTLEQDLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIA 509 +F L S + +D+ +S LRD++ +R+L EK+ Sbjct: 462 VFALLDELSIIVKDVEASNDPAFGATGVRLRDALGALDR---TSRYLLEKLG 510 >gi|328951154|ref|YP_004368489.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] gi|328451478|gb|AEB12379.1| Acyl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] Length = 381 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 37/288 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA+ ++ ++ D Y L+G K W + +D ++ A Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALRTRAERDGD-YYILNGTKMWISNGGEADVIVVFAT 172 Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294 V+ + +V ++E G+P GL +L K+G R++ T EL F N Sbjct: 173 VDPAKRHKGVVALVVEKGTP-GLSAHKLHGKMGQRASGTYELVFENVRVPVANRLGEEGE 231 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 F + LN + PV A SV R +L EA YA+ R G + D Sbjct: 232 GFKIAMNTLNKTRIPV-----------AAGSVGVARRALEEATKYAKEREAFGRPIADFQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+ + + A ++ A D+ ++ +A + K + ++A Sbjct: 281 AIQFKLADMYIGLETARMYTYYAAWLCDQGLPHAQASA-------VAKAYASEIAFKAAN 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460 EA++ GG GY+ E + + R+ N I G+ V+ NLL++ Sbjct: 334 EAIQIHGGYGYMHEYPVEKLLRDVKLNQIYEGTNEIQRVIIARNLLKE 381 >gi|295695910|ref|YP_003589148.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411512|gb|ADG06004.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 390 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 20/273 (7%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238 R+Y P PM + LTE G++ A + + + D Y L+G K F+++ Sbjct: 107 KRKYLP----PMARGEWIGAFALTEPGAGSNAANLKTTAVRKGDK-YILNGSKHFITNGS 161 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295 ++ F ++A + +G + + + G +++ K+G R + +VEL F + Sbjct: 162 IAQVFTVMAVTDPMMGPKGITSFIVERDFPGFRIGKIEEKMGLRGSHSVELFFEDCEVPV 221 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQP 353 +LG G V +KIL + + + + G V L E +I YA +R G + +Q Sbjct: 222 ENVLG--REGQGYVNALKILANGRAGLAARNLGSCVKLLELSIEYAFQREQFGKPIFEQQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 +++ +A++ALDI A +L++R+A DE + +EAA A+++ ++ V Sbjct: 280 IIQHYLAEMALDIEALRSLTYRVAWMVDEKMNVIKEAAMAKLLG-------SEVYNRVAD 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY++E + R+YR++ I G+ Sbjct: 333 KALQIHGGMGYMKEMPVERYYRDARITKIYEGT 365 >gi|193782672|ref|NP_436012.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|307304464|ref|ZP_07584215.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|307318172|ref|ZP_07597608.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|193073128|gb|AAK65424.2| Acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306896213|gb|EFN26963.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306902666|gb|EFN33260.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 380 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 21/269 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 +TE GTD++ I + ++ DG G W ++P++D +LA+ + G + Sbjct: 121 ITEPEAGTDVSGIRTTAERDGDGWMLNGGKIWIHNAPVADVGFVLARTDKEAGNRGMSIF 180 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318 + D + G+ ++K+G R++ L F++ G LLG G M ++ L Sbjct: 181 IVDLNSAGVERGPKEHKMGQRASQVGALTFTDVRLPGGALLG----QEGRGFHM-MMSVL 235 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D + ++ + V +A+ A+ YA R G + D ++ +AD+A DI AA L Sbjct: 236 DKGRVGIAALAVGIAQAGLEAAVDYAGTRKQFGKAISDFQGVQWLLADMAKDIEAARLLV 295 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A+ D R +A A I K + MA A+A++ GGSGYI + R Sbjct: 296 HSAASKID----RGLDATKA---CSIAKCFAGDMAVQRTADAVQVFGGSGYIRGFEVERL 348 Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKG 461 YR++ I G+ + + LL+KG Sbjct: 349 YRDAKITQIYEGTNQIQRMIIARELLKKG 377 >gi|328470429|gb|EGF41340.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus 10329] Length = 384 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T V + PK+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFATEDVRAKYCPKLVTGEW----------------LGSYCLTEPNAGSDAASLTTT 139 Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K + Y L+G K F+S + +D +++A+ G G V + +G+ Y R + Sbjct: 140 ASKKGN-TYVLNGGKAFISGAGETDVLVVMART-GEAGAKGVSAFVVPAQDDGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G + MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFDNVVIPASHLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y R G L ++ +AD+A ++ AA L A+ D Sbjct: 256 LNQATQYMLERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + + +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQICDQALQIYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|221215708|ref|ZP_03588669.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD1] gi|221164410|gb|EED96895.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD1] Length = 596 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDG+ N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + PI K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|148548899|ref|YP_001269001.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148512957|gb|ABQ79817.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 591 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 31/284 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE + GTD+A + ++ Q +DG Y ++G K F+S ++D + L A V Sbjct: 162 LTEPQAGTDLALLRTRAQPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-- 307 G + FLVP+LL G N L L++K+G + +T + F G+L+G+ N Sbjct: 222 RG-ISLFLVPKLLPGGERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACM 280 Query: 308 --PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP------------ 353 + D + + L ++ + + LA A + R ++G + ++P Sbjct: 281 FTMMNDARFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRR 340 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + ++ + + + TA L ++ A +R A A ++ PI K + + V Sbjct: 341 MLLTQKTLTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEV 400 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ GG GYI E + + R+S + G+ LD++ Sbjct: 401 ASLGVQVYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLI 444 >gi|89902284|ref|YP_524755.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89347021|gb|ABD71224.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 598 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 46/347 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249 LTE GTD+ + S+ + +DG Y ++G K F+S+ +D ++LA+ + Sbjct: 167 LTEAHCGTDLGLMRSKAEPQADGTYKITGEKIFISAGENDMASNIIHLVLARLPDAPVGI 226 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G V F+VP+ L +DGS NG+ L++K+G NAT +L G ++G N Sbjct: 227 KG-VSLFIVPKFLVKQDGSLGARNGIYCGGLEHKMGICGNATAQLVLDGAVGTMVGQPNK 285 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353 + M L S+ V+ A+ YA+ R ++G D+P Sbjct: 286 GMQAMFVMMNAARLGVGNQSLGQTEVAYQNALAYAKERIQMRSLTGVKAKDKPADPIIVH 345 Query: 354 -------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + +A A+ + +A+ +S + K R + ++ PI K + Sbjct: 346 PDVRKMLLTAKAYAEGGRALLCYSAMLLEKEHSHPDEKVRKDAGELLAMLTPIVKAFITD 405 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463 M+ GG GYI++ + + R++ N I G+ LD+L L G Sbjct: 406 NGHISTNACMQVFGGHGYIKDWGMEQFARDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 465 Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503 L F +L L + G + K I IL D ++ + G F Sbjct: 466 LRKFGKLVGQLVAEEGVNEKMAEFITPIAILGDQMTKFTTEIGFKGF 512 >gi|110351008|gb|ABG73396.1| acyl-Coa dehydrogenase [Pimephales promelas] Length = 243 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 28/253 (11%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRL 261 G+D ++ ++ +K SD Y ++G K W ++ + F+++A E G CFLV R Sbjct: 4 GSDAFSLKTKAEKHSD-YYIINGSKMWISNAEHAGVFLVMANAEPAAGYRGITCFLVDR- 61 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320 +GL R +NK+G R+++T L F N + N+ K I L+ Sbjct: 62 ----DTDGLSIGRKENKLGXRASSTCPLTFDN---MKIHQKNILGKVGHGYKYAIGMLNE 114 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++ + LA+ A+ Y R+R G + D ++ IA +A + AA L++ Sbjct: 115 GRIGIAAQMLGLAQGCFDHAVPYTRQRVQFGKRVFDFQGLQHQIAHVATQLEAARLLTYN 174 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + + +EA A KY+ ++A ++ +E +GG G+ ++ I ++YR Sbjct: 175 AARLKEAGRPFIKEACMA-------KYFSAEVAALTTSKCIEWMGGVGFTKDYPIEKYYR 227 Query: 436 ESPANSILLGSGN 448 + SI G+ N Sbjct: 228 DCKIGSIYEGTTN 240 >gi|120610844|ref|YP_970522.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589308|gb|ABM32748.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 597 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 133/275 (48%), Gaps = 40/275 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + ++ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQGDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPE 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F+VP+ L + G+ N + +++K+G +++ T L+F + G+L+G Sbjct: 221 GVKGISLFVVPKFLVNADGSLGARNDVQCVSIEHKLGIKASPTAVLQFGDAGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGILIDQP 353 + N +E M I++ + + G+ V+ +A+ YAR R V G + P Sbjct: 281 EENRG---LEYMFIMMNAARYAVGLQGIAVAERAYQQAVQYARDRVQSRPVDGSLPGSAP 337 Query: 354 VMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 ++ RA+ + +A+ A ++ A+ +A R + A+ M P+ K Sbjct: 338 IIHHPDVRRMLMTMRALTEGCRAMASVAAAAYDAAHHHPDAGVRKQNQAFYEFMVPLVKG 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +M+ V + ++ GG G+IEE A+HYR++ Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|207725352|ref|YP_002255748.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206590588|emb|CAQ37550.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 594 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ M+D + +LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + A AL++ A ++ D+A + EA Y + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|167035986|ref|YP_001671217.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166862474|gb|ABZ00882.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 600 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 46/307 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ +A I ++ + +DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAADGSYRLKGNKIFISGGDHELSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ + DGS NG+ L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFNVNPDGSRGPRNGVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 + G+L+G + + M +I + + + ++ +G SL YAR+R Sbjct: 271 DNGECVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQG 326 Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 H +I+ +KR + + A L A FD+ + SEE+ + Sbjct: 327 RLPDNKDPHSQAVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTASEESTRQQ 386 Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W A++ +GG GY E + ++YR++ N I G+ Sbjct: 387 TQELLDLLTPIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446 Query: 449 AMVLDVL 455 LD+L Sbjct: 447 IQSLDLL 453 >gi|219847153|ref|YP_002461586.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541412|gb|ACL23150.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM 9485] Length = 382 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 46/283 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D A + + + D + ++G K W ++P++ I+ A Sbjct: 113 PAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGD-EWVINGQKMWITNAPIAGHIIVTAV 171 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + +G F+VPR G+P GL + + + K+G R + + + +L D+ Sbjct: 172 TDPELGKKGISAFIVPR----GTP-GLSFGKHEPKMGLRGSVSTAV--------MLDDVR 218 Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGIL 349 V P E++ + L LD + + M + LA+A + A R R G + Sbjct: 219 V---PRENLLGERGRGFIQFLQVLDGGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPI 275 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + IA++A+D+AAA AL + A D K + EAA A++ A C+ Sbjct: 276 GAHQSVANMIANMAVDLAAARALVYTAARMKDAGKPYTREAAIAKLFASEASERICR--- 332 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 +A++ GG GY +E + R YR++ + +G G + +L Sbjct: 333 ----DAIQVFGGYGYSQEYPVERLYRDT--RLLTIGEGTSEIL 369 >gi|149185012|ref|ZP_01863329.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21] gi|148831123|gb|EDL49557.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. SD-21] Length = 388 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 126/254 (49%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K+ DG Y L+G K W ++P +D ++ A+ + Sbjct: 129 LAMSEAGAGSDVVSMKAKAEKV-DGGYILNGTKFWITNAPYADTLVVYAKTAPEAASRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + +G + K+G R + T EL F + F + + NV + +L+ Sbjct: 188 TTFLIEKDFDGFSIGQKIEKVGMRGSPTAELVFDDCF---VPEENVMGPENGGVGVLMSG 244 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++G+++ + +A I Y R R G + +M+ +AD+ + + +A A Sbjct: 245 LDYERVVLAGLQLGVMQACLDTVIPYLRERKQFGKFIGSFQLMQAKVADMYVALQSARAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ +A S D K+ +AA A ++A + A V AE+++ +GG+GY + + R Sbjct: 305 TYAVAKSCDANKTTRFDAAGAILLA-------SENAFRVAAESVQALGGAGYTLDWPVER 357 Query: 433 HYRESPANSILLGS 446 + R++ I G+ Sbjct: 358 YMRDAKLLDIGAGT 371 >gi|55377902|ref|YP_135752.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55230627|gb|AAV46046.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 385 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 33/273 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ +G ++E G+D++++++Q +K D + ++G+K W + + D F++L + Sbjct: 112 PVATGDAIMGAAISEPDTGSDVSSVSTQARKDGDE-WVINGNKMWITNGSVGDYFVVLCE 170 Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 EGR F ++L + +G +++ K+G R++ T EL +L D+ V Sbjct: 171 TDPDAEGRYNGF--SQILIESDRDGFEAEKITGKLGIRASDTAEL--------ILNDVRV 220 Query: 305 ------STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 T ++I+ + D V+ V +A A+ YA+ R G + + Sbjct: 221 PEDNLVGTRGAGFLQIMQFFDETRTGVAAQGVGIARGAAERALEYAQDREQFGQSISEFQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +A++ +I AA L+ + A S D + + +A + K ++A Sbjct: 281 ATQHKLAEMFTEIEAARQLTHKSAWSVDNDADKLTQ------LASMAKEKASRVAVETAD 334 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG+GY+ + + R YR++ I G+ Sbjct: 335 EAVQIHGGAGYVNDFDVERFYRDAKITQIYEGT 367 >gi|261753581|ref|ZP_05997290.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261743334|gb|EEY31260.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 109 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 62/103 (60%) Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAA 516 +L + LF+ + + LG G+ I +LR ++ L + D+G+AR LTE++A A++AA Sbjct: 4 VLSRAPALFDGVLDWISGQLGPRGQGTIDVLRAALQLTETDQGVARLLTEQLAFAAAAAE 63 Query: 517 LYRAGMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLY 559 L + G +DIAD F+E R +T+ ML R NA IID LY Sbjct: 64 LRQLGADDIADAFIETRLGGQWRTTYGMLDARHNAMRIIDQLY 106 >gi|167031416|ref|YP_001666647.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166857904|gb|ABY96311.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 592 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 142/345 (41%), Gaps = 42/345 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405 ++R + + I A S +A D AK RSEE ++ P+ K + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDANVRKRSEE--LVALLTPVAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 + + GG GYI E + R+ I G+ LD++ ++ G Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGA 463 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGLARFLTEK 507 + +LFS + +S + +++C + GL ++ E+ Sbjct: 464 YY-RLFSDEIRQFIASADGALDEFAKPLAVCLDQLDGLTEWVLEQ 507 >gi|85375184|ref|YP_459246.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594] gi|84788267|gb|ABC64449.1| isovaleryl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594] Length = 388 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + G Y L+G K W ++P +D ++ A+ +G G + Sbjct: 129 LAMSEAAAGSDVVSMKLKAEAVQGG-YVLNGTKFWITNAPEADTLVVYAKTDGSAGSRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G + K+G R + T EL F + ++G +N G ++ Sbjct: 188 TAFLVEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPEDRVMGPVNGGVGV-----LM 242 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++G+++ + +A I Y R R G + +M+ +AD+ + + +A Sbjct: 243 SGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLMQAKVADMYVSLQSAR 302 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A ++ +A S D K+ +AA A ++A + V AE+++ +GG+GY + + Sbjct: 303 AYTYAVAKSCDAEKTTRFDAAGAILLASENAF-------RVAAESVQALGGAGYTLDWPV 355 Query: 431 ARHYRESPANSILLGS 446 R+ R++ I G+ Sbjct: 356 ERYMRDAKLLDIGAGT 371 >gi|76801583|ref|YP_326591.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160] gi|76557448|emb|CAI49026.1| acyl-CoA dehydrogenase 9 [Natronomonas pharaonis DSM 2160] Length = 374 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 44/266 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 L+E G++ A ++++ K D Y ++G K W + S I+ A+ + V Sbjct: 120 FALSEPDAGSNPAEMSTEAVKDGDE-YVINGKKQWITNGERSGVVILFAKTDRDDPNTVT 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312 FLVP+ +E GL + ++K+G R+ S+T L D+ + P E+ Sbjct: 179 QFLVPKDVE-----GLEVGKKEDKLGLRA--------SDTTTLLFDDVRI---PAENRLT 222 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ L +A ++G R+++A +A+ YA R G LI+ + +A Sbjct: 223 EVGDGLQAAFSILTGGRIAIAAQAVGLAQAALDDAVEYANDREQFGKPLIEHQAIAHKLA 282 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ DI AA L+ A R E A + KY+ + A V EA++ G Sbjct: 283 DMQTDIQAARLLTRDAA--------RKNETGVDPKAASMAKYFASETAVDVANEAVQVHG 334 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY ++ + R+YR++ +I G+ Sbjct: 335 GYGYTKDFDVERYYRDAKITTIYEGT 360 >gi|149375646|ref|ZP_01893415.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149360048|gb|EDM48503.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 606 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 37/292 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ + ++ DG + LSG K F+SS D I+LA++ +G Sbjct: 165 LTEPQCGTDLGQVKTKAAPQEDGSFKLSGTKIFISSGDHDLTENIVHIVLARLPDAPKGT 224 Query: 253 VGC--FLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+LL DG+ NG+ L+ K+G +++AT + F GFL+G N Sbjct: 225 RGISLFIVPKLLPDGNGGVGEANGVTCGSLEKKMGIKASATCVMNFDEATGFLIGPENEG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +AI V +S A+ YAR R V+ ++ Sbjct: 285 LNCMFTFMNTARIGTAIQGVGPAELSYQWALDYARERRSMRALSGKKEPDEVADSLIHHA 344 Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEEA---AYAR---IMAPITKYWC 404 V + + A+ L + RLA+ E + ++ AY + PI K + Sbjct: 345 DVRRMLLTQKAVAEGGRAMLYYAARLADHMVEGHTAGDQKKADAYDDKLGFLTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ ++ GG GYI E + + R++ ++ G+ LD+L Sbjct: 405 TELGNEAANLGVQVFGGHGYIREHGMEQIVRDTRIATLYEGTTGIQALDLLG 456 >gi|160897834|ref|YP_001563416.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160363418|gb|ABX35031.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 596 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDELKATYLEKLVTGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ DG Y + G K F++ D ++LA+V G + F+V Sbjct: 171 DLALVRTKADPQPDGSYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR----HVSGGI-----LIDQPVMKR- 357 M I++ + V G+ V S A+ YAR R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERSYQHAVAYARERVQSRPVDGSVKASATIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A + +AA A ++ ++ +A+ R AA+ M P+ K + +M+ V Sbjct: 348 LMTMRAYTEGCRAMAATAAAAYDASHHHADAQVREANAAFYEFMVPLVKGYSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|148652719|ref|YP_001279812.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571803|gb|ABQ93862.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 597 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 52/339 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQVEGR---- 252 LTE G+D+ I ++ + DG Y ++G K F+S+ M+D I+LA++ G Sbjct: 164 LTEAHAGSDLGIIRTKAEPKGDGTYAITGQKIFISAGEHDMTDNIIHIVLARLPGAPEGT 223 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + DGS N + +++K+G +++AT + F G+L+G N Sbjct: 224 KGISLFIVPKVNVNADGSLAERNQVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG----ILIDQPVMKR 357 + + + +A+ ++ V+ ++ YA+ R +SG + D ++ Sbjct: 284 LNCMFTFMNVARIGTAVQGLTASEVAFQGSLEYAKERLAMRSLSGAKAPEKVADPIIVHP 343 Query: 358 AIADIALDIAA----ATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKMA 408 A+ ++ L A AL + LA D AK EE YA ++ PI K + + Sbjct: 344 AVRNMLLTEKAFAEGGRALVYYLAMFADTVAKGTGEEQQYADQMLSLLTPIAKAFLTETG 403 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 ++ GG G+I E + ++ R++ + G+ LD+L Sbjct: 404 YEAANHGVQVYGGHGFIREWGMEQNVRDTRIACLYEGTTEIQSLDLLG------------ 451 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKE---DKGLARFL 504 + LGS GK + + C+E ++ +A F+ Sbjct: 452 ----RKVLGSQGKMLANFTKVIHKFCQEHQDNEAMAEFI 486 >gi|83591775|ref|YP_425527.1| acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] gi|83574689|gb|ABC21240.1| Acyl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] Length = 589 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 60/325 (18%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QKISDGIYCLSG 230 W PK+ S E+ T + LTE + G+D+AA+ ++ + DG+Y + G Sbjct: 148 WLPKLISGEWTGT-------------MNLTEPQAGSDLAAVRTKAVAAPDLGDGVYRIFG 194 Query: 231 HKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQR 274 K F++ D ++LA++ + F+VP+ L G+ N L Sbjct: 195 SKIFITYGDHDLAPNIVHMVLARISDAPPGIKGISLFIVPKTLPTAEGGLGAANDLRCVS 254 Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 L++K+G ++ T + F + G+L+G N +E M +++A + V V Sbjct: 255 LEDKLGIHASPTCVMAFGDQGGAVGYLVGAANHG---IEYM--FTMMNNARLGVGVQGVG 309 Query: 332 LAE-----AIHYARRR------HVSGGI---LIDQPVMKRAIADIALDIAAATALSFRLA 377 AE A+ YAR R V GG +I P ++R + + AA +++ A Sbjct: 310 QAERATQAAVEYARARVQGGDASVRGGPSVSIIHHPDVRRMLMTMRARTQAARLITYLTA 369 Query: 378 NSFDEAKSRSEEAAY------ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + D AK ++ A A ++ PI K W + V ++ GG GYIE+ A Sbjct: 370 AALDTAKRHADAALRAEAATRAALLTPIAKAWSTEAGIDVANLGIQVHGGQGYIEDAGAA 429 Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456 + R++ SI G+ +D++ Sbjct: 430 QFLRDARIASIYEGTNGIQAIDLVG 454 >gi|299533791|ref|ZP_07047162.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] gi|298718207|gb|EFI59193.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] Length = 386 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W P++ + E V LTE G+D A++ + K D Y Sbjct: 102 TPEQQAQWLPRLATGE-------------VIASFALTEPEAGSDAASLRTTAVKNGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K F++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 IVNGTKRFITNAPHAGMFTLMARTNPEDKGAGGVSSFIV-----DARSAGISFGKYDRKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ A ++V + L Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGKGFKTAMKVLEKGRIHI--AAVAVGCAKRIL 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + D +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 HDALQYALERKQFGQAICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGSNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GGSGY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGSGYMSEYGIERFYRD 356 >gi|187927891|ref|YP_001898378.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|187724781|gb|ACD25946.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] Length = 594 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 150/325 (46%), Gaps = 55/325 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ + EDGS N +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFMVNEDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + A +A A + + + +R + AA + PI K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSIDVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A+ YR++ Sbjct: 408 SLGVQVHGGMGFIEETGAAQFYRDA 432 >gi|33600112|ref|NP_887672.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567710|emb|CAE31624.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 595 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 49/327 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 +AP++ S E+ T + LTE + GTD+ + ++ + DG Y +SG K Sbjct: 152 YAPRLASGEWTGT-------------MCLTESQAGTDLGLLRTRAEPDGDGAYRISGSKM 198 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F+SS D ++LA++ + F+VP+ L D G NG+ +++ Sbjct: 199 FISSGEHDLASNIVHMVLARLPDAPAGTRGISLFVVPKRLPDAQGEPGERNGVYCDAIEH 258 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +NAT L F N G+L+G+ N + M L + ++ +L +++ Sbjct: 259 KLGLHANATCVLRFENARGYLVGEPNKGLAAMFVMMNSARLGTGAQALGLTETALQKSLA 318 Query: 338 YARRRHVS-----------GGILIDQPVMKRAIADIALDIAAATALSFRLANSFD----- 381 YA R S +I QP ++R + A + LA D Sbjct: 319 YAAERLQSRAPGHEKAITRADPIILQPDVRRMLLTQQAWAQGARMFLYWLALQIDTELHA 378 Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 + R ++ P+ K + A + A++ GGSGYI E I + R+ Sbjct: 379 ADPAERDRAGGLLSLLTPVAKAFVSDNAVESVNLAVQVHGGSGYIVESGIEQTLRDVRIL 438 Query: 441 SILLGSGNAMVLDVLN---LLEKGTNL 464 I G+ D+L L ++G L Sbjct: 439 PIYEGTNGVQAHDLLARKVLADQGARL 465 >gi|107023106|ref|YP_621433.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116686652|ref|YP_839899.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105893295|gb|ABF76460.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116652367|gb|ABK13006.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 596 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|311067526|ref|YP_003972449.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] gi|310868043|gb|ADP31518.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] Length = 571 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 17/271 (6%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + A T+ + L+G K W ++ ++D +++ A+ + F+V Sbjct: 148 LTEPSAGSDALNAKTTAVLNEEGTAWILNGEKQWITNAQVADVYVVFAKTTEGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316 R E G+ + K+G + ++T L E S +LG + ++ + Sbjct: 208 RSFE-----GVSVGPEEKKMGIKGSSTATLILEEVSIPIENVLGKVGKGHRVALNILNMA 262 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A ++ + +L A++YA++R +I +++ IAD+A+ I A + ++R Sbjct: 263 RLKLAFSNIGTSKQALKLAVNYAKQRKQFNRPIISFSMIQEKIADMAISIYGAESAAYRT 322 Query: 377 ANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A S D R E A I K C ++ ++ EA++ GG GY++E Sbjct: 323 AGSLDNVFDCADPLDDRLRELATYASECAINKVNCSEVLDRIVDEAVQIHGGYGYMQEYE 382 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R YR+ N I G+ L + LL K Sbjct: 383 VERLYRDVRINRIFEGTNEINRLTIAKLLMK 413 >gi|309792197|ref|ZP_07686669.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] gi|308225738|gb|EFO79494.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] Length = 417 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K + G LTE GTD A+ + ++ D Y L+G K W + ++D F+++A+ Sbjct: 130 PQAKGELLAGYCLTEPNSGTDAVAMQATARRDGDA-YILNGEKIWISLADIADTFLVIAK 188 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG- 307 + G + + + + G+ L K+G R+ NT G +L D+ V Sbjct: 189 TDPTKGARGISAFIVERTMPGVSSYPLHGKLGMRAG--------NTGGLVLQDVRVPLAN 240 Query: 308 ----PVEDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 E KI + LD+ +V+ ++ SL ++ YA RH GG + D ++KR Sbjct: 241 RLGEEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASLKYAEERHSFGGPIADHQLVKR 300 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 I+ + + + L +R ++ + + E A+ A ++ + C +A++ Sbjct: 301 MISHMVRKLDTSRLLVYRAGWMKNQGQRNTRETTLAKWHATVSSFECAD-------DAIQ 353 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY +E + R+ R + I G+ Sbjct: 354 IHGAYGYSDEYPVERYLRNARGGIIYEGT 382 >gi|269128562|ref|YP_003301932.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268313520|gb|ACY99894.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 418 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W P++ S E V LTE G+D + +++ K DG Y Sbjct: 141 TEEQKRQWLPRLASGE-------------VIGAFALTEAEAGSDPSTLSTTAVKDDDGNY 187 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 ++G K F++ +P +D F++ A+ G + L+E +P GL K+G R Sbjct: 188 VINGAKRFITNAPEADVFMVFARTGGPGSRGISTFLVERDAP-GLKVGPPDEKMGQRGAH 246 Query: 286 TVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 T E+ F N GF +++ G + + + L I L Sbjct: 247 TAEVFFDNVRVPASAMVGPEGTGFRTAMASLAHGRLSIAAVCVGLAQRI---------LD 297 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E + YA+ R G + + +++ IAD ++ A A+ A ++D + R Sbjct: 298 ETVAYAKERAQGGRKIGEYQLVQGMIADSQAELYAGRAMVLEAARAYDAGEDR------- 350 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++ KY+C +M V A++ GG GY+ ++ R YR++ Sbjct: 351 KLGPSCAKYFCSEMLGRVADRAVQVFGGMGYMRGVAVERFYRDA 394 >gi|159045625|ref|YP_001534419.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter shibae DFL 12] gi|157913385|gb|ABV94818.1| putative acyl-CoA dehydrogenase family protein [Dinoroseobacter shibae DFL 12] Length = 571 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 25/299 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRV 253 + LTE + G+D+ A+T++ DG Y ++G K ++S +D ++LA++ +G Sbjct: 161 MNLTEPQAGSDVGALTTKAVPKGDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAP 220 Query: 254 GC-----FLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G FLVPR L D G+P N L L++K+G + T +++ G+L+G + Sbjct: 221 GTKGISLFLVPRHLPDAAGNPGVANALKVVSLEHKLGLHGSPTAVMQYEGATGWLVGPEH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------QPVMKR 357 + M L + + + A+ +AR R + D ++R Sbjct: 281 GGMRAMFTMMNNARLGVGVQGIGVAEAAYQHALAHARDRKQGQTPVADADSILAHADVRR 340 Query: 358 AIADIALDI--AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + + ++ A A ALS +A A AA A ++ PI K + V Sbjct: 341 MVMTMRAEVFAARAIALSTAVATDMHHATGAESWAARAALLTPICKAYGTDTGIRVADLG 400 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFEQLFSTLE 473 ++ GG G IEE A++ R+ +I G+ +D++ L G +L +E Sbjct: 401 LQVHGGMGVIEETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLADGGEAMSRLLDEIE 459 >gi|104784027|ref|YP_610525.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95113014|emb|CAK17742.1| putative acyl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 592 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 36/318 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS N +++K+G + +AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQGSATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKVADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK + A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVAMQLDSAKYSEDAATRKRSEELVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G + Sbjct: 406 GLECTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYY 465 Query: 466 EQLFSTLEQDLGSSGKKV 483 + + Q + S+G ++ Sbjct: 466 QLFADEIRQFIASAGGEL 483 >gi|294140852|ref|YP_003556830.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] gi|293327321|dbj|BAJ02052.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] Length = 585 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 34/296 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ + DG Y ++G K F++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITGGDHDLTENVIHLVLAKLPDSKG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G N + +++K+G +++AT + + G+L+G+ N G Sbjct: 224 ISLFLVPKIKVDDSGALGESNKVTVGSIEHKMGLKASATCVMNYDEAQGYLIGEPN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGGI--------LIDQP 353 V ++ Y AI + G+ S A A YA+ R +GG +I Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHG 340 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMA 408 ++R + +I + A ALS D E +++++ + Y ++ P+ K + Sbjct: 341 DVRRMLLNIRVLTEAGRALSVLTGQQLDIAKYGEGEAKAKASRYVGLLTPVAKAFLSDRG 400 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 A + GG GYI E I + R++ I G+ +D L G NL Sbjct: 401 LDAAIMAQQVFGGHGYIRETGIVQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|262373555|ref|ZP_06066833.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter junii SH205] gi|262311308|gb|EEY92394.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter junii SH205] Length = 607 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/344 (20%), Positives = 146/344 (42%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +++ M +M T + PK+ + T + LTE + GT Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEAAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDSPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G R++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEINKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + +LA+ +A + ++AAY PI K + ++ Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMADALASGDQAAYEAADDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I+E + + R++ +++ G+ LD+L Sbjct: 413 NHGIQVYGGHGFIKEWGMEQIARDARISTLYEGTTGVQALDLLG 456 >gi|229592982|ref|YP_002875101.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] gi|229364848|emb|CAY52895.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] Length = 592 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 96/444 (21%), Positives = 177/444 (39%), Gaps = 62/444 (13%) Query: 52 SVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVE-FHPAWHALLRRS 110 +V + +E + E TA+ +A ++ Q G RWD F P ++ Sbjct: 34 TVDAETVEAILEEAGKVTAKSIAPLSRGGDEQ-------GCRWDNTAVFTPDGFPQAYKT 86 Query: 111 IHDGLHCSIW-DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--T 167 +G + D +F + +A + + + L G + P +TS + V++ T + Sbjct: 87 YAEGGWVGVGGDPAFGGMGMPKAVSAQVEEMINSSSLAFG--LYPMLTSGACVSINTHAS 144 Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 + + PK++S E+ A + LTE GTD+ I ++ + +DG Y Sbjct: 145 EDLKATYLPKMYSGEW-------------AGSMCLTEAHAGTDLGIIRTKAEPQADGSYK 191 Query: 228 LSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLC 271 +SG K F++ D ++LA++ + FLVP+ + + G N + Sbjct: 192 VSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGERNTVS 251 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +++K+G +++AT + F G+L+G+ N + M L I ++ S Sbjct: 252 CGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGVGIQGLASGERS 311 Query: 332 LAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 AI YAR R V+ I++ P ++R + + A S +A Sbjct: 312 YQNAIEYARDRVQSRAPTGAQAKDKVADPIIV-HPDVRRMLLTMKASNEGGRAFSTYVAT 370 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D AK + A R ++ P+ K + + + GG GYI E + Sbjct: 371 QLDIAKFSEDAVARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYIREWGQEQ 430 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 R+ I G+ LD++ Sbjct: 431 LVRDVRITQIYEGTNGIQALDLMG 454 >gi|148381231|ref|YP_001255772.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 3502] gi|153930801|ref|YP_001385606.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935189|ref|YP_001389012.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. Hall] gi|168179065|ref|ZP_02613729.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC 2916] gi|170757106|ref|YP_001782911.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1 str. Okra] gi|170758551|ref|YP_001788604.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3 str. Loch Maree] gi|148290715|emb|CAL84846.1| putative acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152926845|gb|ABS32345.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931103|gb|ABS36602.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. Hall] gi|169122318|gb|ACA46154.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1 str. Okra] gi|169405540|gb|ACA53951.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3 str. Loch Maree] gi|182670268|gb|EDT82244.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC 2916] gi|322807598|emb|CBZ05173.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065] Length = 377 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG++N Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227 Query: 306 TGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + MK L I + S + ++ + ++ EA+ YA++R + ++ +A+ Sbjct: 228 KGFITAMKTLSVGRIGVASQALGIA--QAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLAN 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + +EA+ A KY+ + A ++ +A++ GG Sbjct: 286 METKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GYI++ I R YR+ +I G+ Sbjct: 339 YGYIKDYKIERLYRDVRVIAIYEGT 363 >gi|309388390|gb|ADO76270.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228] Length = 379 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + GLTE GTD +A + + D Y L+G K F+++ ++D FI+ A Sbjct: 113 PLARGDKLGAFGLTEPDAGTDASAQKTTAELDGDE-YVLNGSKIFITNAGVADTFIVFAM 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + + G + +NK+G ++ T EL F D V P Sbjct: 172 TDKSKGTRGISAFIVEKEYPGFSVGKKENKLGINASDTRELIFK--------DCRV---P 220 Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPV 354 E++ K + A+ ++ G R+ +A E + Y + R G + Sbjct: 221 KENLLGKEGMGFKIAMATLDGGRIGVAAQALGIAQRALDETVQYVKERQQFGRAISKFQG 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ IA++A + AA L ++ A + D + S+EAA A KY+ + A AV + Sbjct: 281 LQWEIAEMATKVEAARLLVYKAAKTKDSGQRFSKEAAMA-------KYYASEAAFAVANK 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GYI+E + R R++ I G+ Sbjct: 334 AIQLHGGYGYIKEYPVERLLRDAKITEIYEGT 365 >gi|256544587|ref|ZP_05471959.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170] gi|256399476|gb|EEU13081.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170] Length = 400 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 18/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K+ Y L+G K F+++ +D +++ A + G + Sbjct: 144 FGLTEPNAGTDASGQQTTA-KLDGDEYVLNGTKIFITNGGYADIYVVFAMTDKSKGNHGI 202 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + L+NK+G ++T+EL F + + N+ + KI + Sbjct: 203 SAFIVEKGTKGFDFGTLENKMGINGSSTMELIFQDC---RIPKENLLGEEGKGFKIAMAT 259 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +AE A+ Y++ R G L + +A++A++I AA L Sbjct: 260 LDGGRIGIAAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARNL 319 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A+ D ++ S AA A++ A T A V A++ +GG GYI+E + R Sbjct: 320 VYKAASLKDAGENYSVAAAMAKLKASRT-------ASFVADRAVQILGGYGYIKEYDVER 372 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R++ I G+ M++ V Sbjct: 373 MMRDAKITEIYEGTSEVMLMVV 394 >gi|226950713|ref|YP_002805804.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2 str. Kyoto] gi|226841227|gb|ACO83893.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2 str. Kyoto] Length = 377 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D A+ + ++ D Y L+G K F++ +P+SD I+ A+ Sbjct: 111 PMIRGEKTLAFALTEPGAGSDAGALATTAREEGD-YYILNGRKTFITGAPISDNIIVFAK 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + G + + D G+ + + ++K+G T ++ N +LG++N Sbjct: 170 TDMSKGTKGITTFIVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGEVN-- 227 Query: 306 TGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + MK L I + S + ++ + ++ EA+ YA++R + ++ +A+ Sbjct: 228 KGFITAMKTLSVGRIGVASQALGIA--QAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLAN 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + +EA+ A KY+ + A ++ +A++ GG Sbjct: 286 METKLNAAKLLVYNAAYKMDCGEKADKEASMA-------KYFAAESAIQIVNDALQIHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GYI++ I R YR+ +I G+ Sbjct: 339 YGYIKDYKIERLYRDVRVIAIYEGT 363 >gi|254522364|ref|ZP_05134419.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] gi|219719955|gb|EED38480.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] Length = 382 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 AIG LTE + G+D A+ + K +DG + ++G K W S P++ ++ A E G Sbjct: 119 AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVLFAMSEPEKG 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + + D G + + K+G R++AT E+EF++ ++ +V E KI Sbjct: 179 ARGITAFIIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAAAEDVLGQEGEGFKI 235 Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD+ + ++ + +A A + Y + R G + + + IAD+ + A Sbjct: 236 AMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKIADMKCKLDA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+ R A + K S EAA A++ A W + +A++ GG GY +E Sbjct: 296 ALLLTLRAAWVKGQGKRFSTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEM 348 Query: 429 SIARHYRESPANSILLGS 446 + R++R++ I G+ Sbjct: 349 PLERYFRDAKITEIYEGT 366 >gi|120555661|ref|YP_960012.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325510|gb|ABM19825.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 599 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ + +DG Y ++G K F+S+ D I+LA++ G Sbjct: 165 LTEPHCGSDLGTLRTKAEPNADGSYSITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L EDGS N + L++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKQLPNEDGSAGERNAVSCGSLEHKMGIHGNATCVMNFDGAKGWLIGPENKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353 + + +AI + + ++ YA+ R +SG GI +I P Sbjct: 285 LNCMFTFMNTARIGTAIQGLGSAELGFQGSLAYAKERLAMRSLSGPKNPDGIADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEA-----AYARIMAPITKYWCCKM 407 ++R + + A AL + D S ++EE A + PI K + ++ Sbjct: 345 DVRRMLLTQKVVAEGARALIYLAGQQVDVVHSGKTEEERKHADALLGFLTPIAKAFLTEI 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI E + ++ R+S I G+ LD+L Sbjct: 405 GYESANLGMQVFGGHGYIAEWGMEQNVRDSRIGMIYEGTTGIQALDLLG 453 >gi|146292689|ref|YP_001183113.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella putrefaciens CN-32] gi|145564379|gb|ABP75314.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens CN-32] Length = 596 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F + G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEDALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLPAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ + A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|315500028|ref|YP_004088831.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] gi|315418040|gb|ADU14680.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] Length = 584 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 59/356 (16%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P+++ A++ AL T R + P + S E+ T + LTE + G+ Sbjct: 124 LYPTLSQAAIEALHHHGTERQKALYLPYLTSGEWSGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFL 257 D+A +TSQ + DG Y L+G K +++ + ++LA++ G + FL Sbjct: 171 DLALLTSQA--VPDGDAYRLTGQKIYITWGDHETRDNILHLVLARLPGAPEGTRGISLFL 228 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 P+ L EDGS N L L++K+G ++ T + F L+G + M Sbjct: 229 CPKYLVNEDGSLGERNALRAVGLEHKLGIHASPTCVMAFEGAKAELVGQPHQGL-----M 283 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL--------IDQPVMKRAI 359 + +++A ++V V +AE A+ YAR R +L D P ++ + Sbjct: 284 AMFTMMNAARLAVGVQGVGIAERAYQLALAYARDRRQGNSVLTGEKKAPIFDHPDVRLML 343 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAME 417 A I AA + A + D+ + ++ R + P+ K W + V + ++ Sbjct: 344 AVSKAKIEAARGICLLTAIAADDYRLNADARVKRREDFLVPVAKAWATDIGVEVASAGVQ 403 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 GG G+IEE A+HYR++ I G+ D++ G L + S LE Sbjct: 404 VHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAGDLV-----GRKLGDDAASALE 454 >gi|17545644|ref|NP_519046.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427937|emb|CAD14627.1| probable acyl-coa dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 594 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKVFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + A AL++ A ++ D+A + EA Y + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDATRKQNEALY-EFLVPVVKGWSTEMSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|309781061|ref|ZP_07675799.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA] gi|308920127|gb|EFP65786.1| acyl-CoA dehydrogenase domain protein [Ralstonia sp. 5_7_47FAA] Length = 594 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 P+ + + P+G R +++K+G +++ T L+F + G L+G+ N Sbjct: 231 PKFMVN--PDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG--- 285 Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356 +E M I++ + + G+ VS +A+ YAR R S + +I P +K Sbjct: 286 LEYMFIMMNAARYAVGMQGIGVSERAYQKAVAYARDRVQSRPVDGSAAKAVPIIHHPDVK 345 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A+ + A +A A + + + +R + AA + PI K W +M+ Sbjct: 346 RMLLTMRAMTEGARALAYVAAAACDAGHHSADDAARKQNAALYEFLVPIVKGWSTEMSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+ YR++ Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQFYRDA 432 >gi|206970403|ref|ZP_03231356.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|206734980|gb|EDZ52149.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] Length = 379 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 18/278 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYVLNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + G + ++K+G RS+ T E+ F + + N+ G Sbjct: 172 TDPESKQHGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K+ + LD ++ V +A+ ++ YAR RH G + Q + +AD+ Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ AA L+++ A E +E+A +++ A T A V EA++ GG Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY ++ + R+ R++ I G+ L + +L K Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|77464317|ref|YP_353821.1| acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|77388735|gb|ABA79920.1| probable acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] Length = 562 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + + DG Y ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 + +D ++LA++ +G G FLVP+ L D G N + L+ K+ Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337 G + T +++ G+L+G + + M + + + V+ A A Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395 RR+ GGI I+ ++R +A + + +A A++ A + D A + E A A + Sbjct: 317 MERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAL 375 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + + V + ++ GG+G+IE A+ R+ +I G+ +D++ Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435 Query: 456 N--LLEKGTNLFEQL 468 +++ G F L Sbjct: 436 GRKMMDGGEAAFRLL 450 >gi|262203444|ref|YP_003274652.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086791|gb|ACY22759.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 591 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 50/339 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +V +A+++A TP W + + T + L+E + G+ +A I Sbjct: 130 TVGNANLLATYGTPEQIDTWVRPVVEGRFFGT-------------MCLSEPQAGSSLADI 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLE 263 T++ DG Y ++G K ++S+ + ++LA+ G + F+VP+ L Sbjct: 177 TTKAVPADDGTYRITGTKMWISAGEHELTENIVHLVLAKAPGGGPGVKGISLFVVPKYLA 236 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGD----LNVSTGPV 309 DG+ N + L +K+GNR+ L F + G+L+G+ L+ + Sbjct: 237 DGTRNDVALVGLNHKMGNRATTNTLLNFGDGTHSPTTVPGAVGYLVGEEHKGLSYMFHMM 296 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADI 362 + +I + + + +G + SL A + R ++ +PV +KR + Sbjct: 297 NEARIGVGFLATALGYAGYQASLEYARVRTQGRPITAKDPSSKPVPIIEHADVKRMLLAQ 356 Query: 363 ALDIAAATALSFRLANSFD-EAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAME 417 + A AL + D EA + +E A ++ PI K W + + A++ Sbjct: 357 KSYVEGALALGLYCSKLVDIEATTDGDERARTTLLLDVLTPIAKSWPSQWCLEANSLAIQ 416 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY +E + ++YR++ N I G+ LD+L Sbjct: 417 VHGGYGYTKEFDVEQYYRDNRLNPIHEGTHGIQALDLLG 455 >gi|254250777|ref|ZP_04944096.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124879911|gb|EAY67267.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSARQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|304382787|ref|ZP_07365271.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973] gi|304336106|gb|EFM02352.1| acyl-CoA dehydrogenase [Prevotella marshii DSM 16973] Length = 574 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 32/341 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + DG + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ + +++K+G + T EL + N L G + G ++ + L Sbjct: 231 RGLSMFIYDRNQGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------DQPVMKRAIADIALDI 366 + L A SV + + EA+ YAR R G +I D + +A D + Sbjct: 289 MNGARLGIAAQSVGVSQAAYDEALAYARERKQFGTPIIAMAPVYDMLAVMKAKLDAGRSL 348 Query: 367 AAATALSFRLANSFDE--------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 TA L +FD+ + ++E+ Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDLYKAFDDIARERKLTPEEKAEQKRYTRLADAFTPLAKGMNSEYANQNAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG--TNLFEQLFSTLE 473 ++ GGSG+I E R YR++ SI G+ V+ + + G T + +++ + Sbjct: 409 IQVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYTAMIDEMLAGDV 468 Query: 474 QD----LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 D L + +K+ +LR++I KE D+ L FL ++ Sbjct: 469 ADAMKPLKARTEKLAAMLREAIDKVKEAGDQELQDFLARRL 509 >gi|237737830|ref|ZP_04568311.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium mortiferum ATCC 9817] gi|229419710|gb|EEO34757.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium mortiferum ATCC 9817] Length = 373 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 37/260 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---GRVGC 255 G TE GT AI ++ + Y L+G K ++ S +D F++ A+ + G + Sbjct: 123 FGWTEAEAGTKTTAIKNENK------YVLNGKKVLITNSHEADIFVVFAKTDLENGTLSA 176 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V R G ++K+G R ++T EL F N LLG+L E + Sbjct: 177 FIVER-----GTKGFSVGEAEDKMGVRGSSTAELFFDNCTIPEENLLGNLG------EGL 225 Query: 313 KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + L+ + V+ V LA+ AI Y + R G + + IAD+ I Sbjct: 226 KIAMSTLNGGRIGVAAQAVGLAQGALDAAIDYVKNRMQLGKPISHHQNTQFVIADLQTKI 285 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA +++R AN K E+ Y MA + K + ++A V +A++ GG+GY + Sbjct: 286 DAARLMTYRAAN----MKDLGEDYGY---MASMAKLFASEIAMEVTTKAVQLFGGNGYSK 338 Query: 427 ERSIARHYRESPANSILLGS 446 + + R R++ I G+ Sbjct: 339 KFPVERMMRDAKVTEIYEGT 358 >gi|217977902|ref|YP_002362049.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2] gi|217503278|gb|ACK50687.1| acyl-CoA dehydrogenase domain protein [Methylocella silvestris BL2] Length = 594 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 43/293 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249 LTE GTD+ + ++ + +DG Y LSG K F+S+ ++D I L V Sbjct: 164 LTEPHCGTDLGLLRTRAEPEADGSYRLSGSKMFISAGEHDLTDNIIHLVLARLPDAPKGV 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FL P+ L EDGS NG+ +++K+G +++AT + F FL+G+ + Sbjct: 224 KG-ISLFLCPKYLVHEDGSLGARNGVSCGSIEHKMGIKASATCVMNFDGATAFLIGEPHK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARR----RHVSGGILIDQP---- 353 + M ++ + + V G+ V+ A A YAR R +SG ++P Sbjct: 283 G---LRAMFAMMNAERLAVGVQGLGVAEASYQGAAAYARERLQGRSLSGAKDPEKPADPI 339 Query: 354 ----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 + +RA A+ +A A L+ D A R E + ++ PI K Sbjct: 340 IVHPDVRRMLLTQRAYAEGCRALAVLAAKQLDLSRHSDAAVRRDAE-DFVALVTPIVKAL 398 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + M+ +GG GYI E + ++ R++ I G+ LD++ Sbjct: 399 LTDLGTECANLGMQIMGGHGYIRENGMEQYARDARIAQIYEGTNGVQALDLVG 451 >gi|153000248|ref|YP_001365929.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS185] gi|151364866|gb|ABS07866.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKERLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|295687527|ref|YP_003591220.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295429430|gb|ADG08602.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC 21756] Length = 597 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 62/363 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + T + + PK+ + E+ T + LTE GTD+ + ++ Sbjct: 136 SAIHFGGTDEQKETYLPKMVTGEWTGT-------------MNLTEPHCGTDLGLLRTKAV 182 Query: 220 KISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLLE--DGS 266 DG Y ++G K ++S+ M+D + +LA++EG + F+VP+ DGS Sbjct: 183 PQGDGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFFPKADGS 242 Query: 267 ----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSA 321 G+ L+ K+G NAT +++ + G+L+G+ N +KI+ + ++ A Sbjct: 243 VGERNQGVKCVGLEEKMGIHGNATCVMQYDDAVGYLIGEENAG------LKIMFVMMNEA 296 Query: 322 IMSVSGMRVSLAEAIHYA---------RRRHVSG--------GILIDQPVMKRAIADIAL 364 + V V+ EA + A + R ++G +I P ++R + D Sbjct: 297 RLGVGLQGVAQGEAAYQAAVAFAKDRLQGRSLTGPKNADGPADPIIVHPDVRRMLMDSKA 356 Query: 365 DIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + TAL L++ + K R + A Y +M P+ K + + + A++ Sbjct: 357 ILEGGRAFLFWTALHGDLSHIHPDEKVREKSADYMSLMTPVLKGYLTDKGFQICSNAVQV 416 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDL 476 GGSG+ E +++ R+ I G+ LD++ L KG F ++Q + Sbjct: 417 HGGSGFTEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEVDQFI 476 Query: 477 GSS 479 G + Sbjct: 477 GEN 479 >gi|218296834|ref|ZP_03497529.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218242714|gb|EED09249.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 372 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 28/278 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P K VA LTE G+D+AAI ++ +K G W +P + F++ A+V Sbjct: 105 PRLKEEVA-SYALTEPHAGSDVAAIRTRAEKAPGGFRLFGRKAWISHAPEASFFVVFAKV 163 Query: 250 -EGRVG--CFLVPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 EGR G FLV R +E G P K+G +++ E+ G L+ + + Sbjct: 164 AEGREGIAAFLVERKEGMEVGPP--------LPKMGQKASPAAEVPLE---GVLVPEEAL 212 Query: 305 STGPVEDMKILIYLDS----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + ++ S A M+V +R +L EA+ YAR R G L + + +A Sbjct: 213 IAREGFRLAMRVFDRSRPMVAAMAVGLLRRALDEALAYARVREAFGKPLWEHQGVGFKLA 272 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A+D+ AA L+ R A+ + ++ S EAA A+ A ++EA++ G Sbjct: 273 EMAMDLEAARLLTHRAADLAERGEANSMEAAMAKAFAADAAVRG-------VSEALQVFG 325 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 G+GY E+ +A+ YR++ I G+ + VL L Sbjct: 326 GNGYSEDCPMAKLYRDAKVLQIYEGTSEIQRVIVLREL 363 >gi|34497240|ref|NP_901455.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34103096|gb|AAQ59459.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 594 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 36/308 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249 LTE GTD+ + S+ + DG Y +SG K F+S+ +S+ I L V Sbjct: 167 LTEPHCGTDLGLLKSKAEPQEDGSYRISGTKIFISAGEHDLSENIIHLVLARLPDAPKDV 226 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 +G + F+VP+ L DGS N + L++K+G ++NAT + G+L+G+ N + Sbjct: 227 KG-ISLFIVPKYLADGSRNAVACGSLEHKMGIKANATAVINLDGAKGWLIGEANKGLSCM 285 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM------- 355 M L + + S A+ YAR R ++G D+ P++ Sbjct: 286 FTMMNAARLGCGMQGLGLGEASFQGALAYARERLQMRALNGAKCPDKAADPIIVHPDVRR 345 Query: 356 ----KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++A + +AA AL + + +A R++ A ++ P+ K + Sbjct: 346 MLLTQKAYTEAGRALAALLALQLDIEDKHPDAAVRADAADLVALLTPVAKAFMTDNGFVA 405 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FE 466 ++ GG GYI E + + R++ + I G+ +D+L LL++G L F Sbjct: 406 ANHGVQVFGGHGYIREWGMEQLVRDARISQIYEGTNGIQAIDLLGRKVLLDQGAKLRKFT 465 Query: 467 QLFSTLEQ 474 +L T Q Sbjct: 466 KLIHTFCQ 473 >gi|16082014|ref|NP_394434.1| acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728] gi|10640289|emb|CAC12103.1| probable acyl-CoA dehydrogenase [Thermoplasma acidophilum] Length = 384 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 18/274 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GL +TE G+D A I++ K D Y ++G K F+S+ +SD F++ A + Sbjct: 122 GLAITEPGAGSDAAGISATAVKKGDR-YVINGDKIFISNGRISDFFVLDAVTDPGKRHRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 + + D GL R +K+G R ++TVEL F + + N+ E K+++ Sbjct: 181 ITAFVADRDTPGLKISRDIHKMGIRGSSTVELAFED---MEIPAENIVGKENEGFKVIME 237 Query: 317 YLDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + +LAEAI Y ++R G + + ++ IA++A +I AA Sbjct: 238 TLDAGRIGIAAQALGIAENALAEAIDYVKQRKQFGTEIANFEGIQFMIAEMATEIEAARY 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++ A + ++ E +A A++ A +A V +A++ GG GY + Sbjct: 298 LTYVAAEKWQNKENTIEISAMAKMKA-------SDVAMRVTTDALQLFGGYGYTTDLDAE 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 RH R++ I G+ L + + K T + Sbjct: 351 RHMRDAKITQIYEGTNQIQRLVIAKEILKKTRYY 384 >gi|228911181|ref|ZP_04074986.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|228848357|gb|EEM93206.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] Length = 379 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F N LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFENCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|332559207|ref|ZP_08413529.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides WS8N] gi|332276919|gb|EGJ22234.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides WS8N] Length = 562 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 36/315 (11%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ + + DG Y ++G K ++ Sbjct: 150 PKLISGEWSGT-------------MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYI 196 Query: 236 SSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKI 279 + +D ++LA++ +G G FLVP+ L D G N + L+ K+ Sbjct: 197 TWADTDFNANVCHLVLARLPDGPQGTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKL 256 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIH 337 G + T +++ G+L+G + + M + + + V+ A A Sbjct: 257 GLHGSPTAVMDYDGAKGWLVGAPHKGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYA 316 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARI 395 RR+ GGI I+ ++R +A + + +A A++ A + D A + E A A + Sbjct: 317 IERRQGGPGGI-IEHADVRRMLAVMKAETFSARAIALACAVALDMGRATGQPEWQARAAL 375 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + + V + ++ GG+G+IE A+ R+ +I G+ +D++ Sbjct: 376 LTPIAKAYGTDVGIEVASMGVQVHGGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLV 435 Query: 456 N--LLEKGTNLFEQL 468 +++ G F L Sbjct: 436 GRKMMDGGEAAFRLL 450 >gi|183219484|ref|YP_001837480.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909627|ref|YP_001961182.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774303|gb|ABZ92604.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777906|gb|ABZ96204.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 388 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 22/284 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM +T +TE G+D+A I + +++ D Y ++G K W ++ +D F +LA+ Sbjct: 113 PMSETFTLAAYAVTEPGAGSDVAGIRTTAKRVGDE-YIVNGSKMWITNAGHADWFFVLAK 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGD 301 + G + + D G+ + + +G R + T + F N G Sbjct: 172 TDPNAGHKGMTGFIVDAKTPGIIIGKKEKNMGQRCSDTRGVTFEDVKVPKENMIGKEGEG 231 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIA 360 ++ G + + + AI +V R +L +I YA R+ G I ++Q V IA Sbjct: 232 FKIAMGAFDKTRPAV----AIGAVGVARAALDHSIRYANTRNAFGKPISVNQGV-SFMIA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A DI A L ++ A D + +A+ A++ +C MA V +A++ G Sbjct: 287 EMARDIEAGRLLCWQSAWLIDNGFRNTYQASIAKV-------FCADMAMRVTTDAVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G G+ EE + + R++ I G+ + + L G + Sbjct: 340 GYGFNEEYPVEKLMRDAKIFQIYEGTSQIQRVIISKFLNDGVGI 383 >gi|167648444|ref|YP_001686107.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167350874|gb|ABZ73609.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 581 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 48/317 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ------ 248 + LTE + G+D+AA+T+ G Y L+G K F++ D ++LA+ Sbjct: 159 MNLTEPQAGSDLAALTTTATPDGAGGYTLNGQKIFITWGDHDVADNVCHLVLARTPDAPP 218 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FL P +L +DG+ N L L++K+G + T + + L+G+L Sbjct: 219 GVKG-ISLFLAPTVLVGDDGALGEANALRVGSLEHKLGIHGSPTCVMLYEGAKAELVGEL 277 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI----L 349 + +++A + V V++AE ++ A+ R G L Sbjct: 278 GKGLA-----HMFTMMNAARLQVGTQGVAIAERAYQQALDFSLERAQGRSAWTGAYPARL 332 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYA---RIMAPITKYW 403 D P +++ + + I AA + A + D A + E AA ++ PI K W Sbjct: 333 FDHPDIRKTLLLMKARIEAARGICLSTAVAADLSRHAATEDERAAAKLREELLTPIAKAW 392 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEK 460 M + + ++ GG G+IEE A+HYR++ N I G+ +D++ L + Sbjct: 393 STDMGVEIASMGVQIHGGMGFIEETGAAQHYRDARINPIYEGANGIQAIDLIGRKLGLGE 452 Query: 461 GT---NLFEQLFSTLEQ 474 G +L + + TLE+ Sbjct: 453 GQAIGDLMDDMRDTLER 469 >gi|304409826|ref|ZP_07391446.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|307304182|ref|ZP_07583935.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] gi|304352344|gb|EFM16742.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|306913080|gb|EFN43503.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] Length = 650 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 216 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 275 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 276 GVKGISLFAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 335 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 336 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 395 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ A A + P+ K + Sbjct: 396 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 454 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 455 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 506 >gi|293604192|ref|ZP_06686600.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292817417|gb|EFF76490.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 608 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 65/332 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+T + K++ P + + ++ T + LTE + G+ Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRKEYVPNLIAGKWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ + DG + L G K F++ +++ I L A V+G + F+ Sbjct: 171 DLAQVATRAVRQDDGTFRLFGQKIFITFGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNV 304 VP+ L D G N + L++K+G + T L + G+ +G+LN Sbjct: 230 VPKFLVDANGAVGKRNDVWCASLEHKLGIHGSPTAVLLYGTGQGEVGEGAVGYQVGELNR 289 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG----ILID 351 +E M I +++A SV + ++E A+ YAR R V G ++ Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHALAYARERVQGRAVEGSPGPVAIVR 344 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCC 405 P ++R + + AA A+S+ A + D+ + RS A+ M PI K + Sbjct: 345 HPDVQRMLLTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRSRNRAFYEYMVPIVKGYST 404 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V + ++ GG G+IEE A+ YR++ Sbjct: 405 ETAVEVASLGIQVHGGMGFIEETGAAQFYRDA 436 >gi|226311664|ref|YP_002771558.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis NBRC 100599] gi|226094612|dbj|BAH43054.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis NBRC 100599] Length = 379 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 34/267 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 GLTE G+D A T ++DG + ++G K F+++ +F+ L V + + Sbjct: 123 FGLTEPNAGSD-AGGTRTNAILADGEWTINGSKCFITNASYASFLALTAVTDKEQGSRGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 F+VP +P +Q L N K+G S+ T EL N + + NV E Sbjct: 182 TAFIVP----TDTPG---FQVLANYEKLGLHSSNTTELVLENV---RVPEENVLGKRGEG 231 Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 K LI LD + + M V +A+A + Y+++R G L ++ +AD+A+ Sbjct: 232 FKQFLITLDGGRIGIGAMAVGIAQAAYDKALQYSKQRTAFGNSLSHFQAIQHKLADMAMH 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + ++ A D + ++EAA A++ + ++A + +A++ GG GY+ Sbjct: 292 IELARTMVYKAAWLKDHGRKFTKEAAMAKL-------YASEIAMSATHQAIQIHGGYGYM 344 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 E + R +R+ A + +G G + +L Sbjct: 345 REYQVERFFRD--ARLLEIGEGTSEIL 369 >gi|170735260|ref|YP_001774374.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821298|gb|ACA95879.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|284045673|ref|YP_003396013.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283949894|gb|ADB52638.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 400 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 28/280 (10%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 M + L+E G+D+AAI + +K+ DG Y ++G K W + SD +L + Sbjct: 115 MATGEIRAAFSLSEPELGSDVAAIKTAAKKLDDGAYEINGQKMWVTNGLRSDLVFVLVKT 174 Query: 250 EGR-------VGCFLVPR---LLED-GSPNGLCYQRLKNKIGNRSNATVELEF------- 291 + + CF+ + + E+ G GL K+G + + EL F Sbjct: 175 DPNAEKAHRGMTCFIAEKEGGVAENTGDFRGLIVPPQLKKMGYKGVESTELVFDGYRCPA 234 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 N G LN + D L ++ A V + +L A+ Y++ R G + Sbjct: 235 ENILGGEAAGLNKGFAQMMDALELGRVNVAARGVGIAQRALELALRYSQERKTFGKPIAQ 294 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ +AD+A + AA L+ R A D + EA A++ A +C Sbjct: 295 HQAIQFKLADMATQVDAARLLTNRAARMKDAGERSDIEAGMAKLFASEAGRFC------- 347 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + E+ GG GY +E I R YR++P +L+G G + + Sbjct: 348 VEESFRIHGGYGYSKEYEIERLYRDAPL--LLIGEGTSEI 385 >gi|119505310|ref|ZP_01627384.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119458765|gb|EAW39866.1| putative acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 597 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 54/338 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249 LTE GTD+ + ++ + +DG Y ++G K F+SS D I+LA+ V Sbjct: 165 LTEAHCGTDLGLLRTKAEAAADGSYQITGTKIFISSGEHDLTENIVHIVLARLPDAPIGV 224 Query: 250 EGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F++P+ + +DGS N + +++K+G NAT + F G+LLG+ N Sbjct: 225 KG-ISLFIIPKFNVNDDGSMGERNTVRCGSIEHKMGIHGNATCVMNFDGARGYLLGEPNQ 283 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP------- 353 + + +A+ ++ M + +++ YA+ R V+G D P Sbjct: 284 GLQAMFTFMNTARIGTALQGIAHMELGYQKSLAYAKDRLQMRSVTGPKNPDGPADPIIVH 343 Query: 354 -------VMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 + ++A+++ + A T L + + DE + +S E + M PI K + Sbjct: 344 PDVRRMLLTQKALSEGGRMMVAYTGKLVDVIECTTDEMEKKSAEDMLS-FMTPIAKAFLT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 + A++C GG GYI+E + ++ R++ + G+ LD + Sbjct: 403 ETGFESANLALQCFGGHGYIKEWGVEQNVRDARIGMLYEGTTGIQALDFIG--------- 453 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 + LGS G + R+ CKE+ +A Sbjct: 454 -------RKVLGSGGVLLQNFTREIHHFCKENAEVAEL 484 >gi|126173955|ref|YP_001050104.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS155] gi|125997160|gb|ABN61235.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS155] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|331005707|ref|ZP_08329071.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989] gi|330420499|gb|EGG94801.1| putative acyl-CoA dehydrogenase [gamma proteobacterium IMCC1989] Length = 591 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 138/278 (49%), Gaps = 35/278 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ-------V 249 LTE + G+D+AA+T++ ++ D Y ++G K F++ M+D + +LA+ V Sbjct: 164 LTEPQAGSDLAALTTKAERNGDH-YLITGSKIFITWGDHDMTDNIVQFILARLPDAPPGV 222 Query: 250 EGRVGCFLVPR--LLEDGSPNGLCYQR---LKNKIGNRSNATVELEFSNT---FGFLLGD 301 +G + FLVP+ + DGS L + +++K+G ++ T + F + G+L+G+ Sbjct: 223 KG-ISLFLVPKYHVNPDGSLGELNDSKPVSVEHKMGIHASPTCVMSFGDNGGAVGYLVGE 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPV 354 N + M I L+ + V + A+ YA R H + + P Sbjct: 282 ENNGLACMFTMMIHARLEVGLEGVGLSERAYQGAVDYAINRKQGKKLGHEGSVSIAEHPD 341 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAK---SRSEEAAYAR---IMAPITKYWCCKMA 408 ++R + + A+ A+++ + ++D +K +++ Y + ++ PI K W ++A Sbjct: 342 VRRMLMLMRSLTEASRAIAYVTSAAYDHSKYNPDTNQQQYYLQRLELLTPIVKAWPTEIA 401 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V ++ +GG G+IEE +A+HYR++ +I G+ Sbjct: 402 QEVTGLGVQVLGGMGFIEESGMAQHYRDARIITIYEGT 439 >gi|237737961|ref|ZP_04568442.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817] gi|229419841|gb|EEO34888.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817] Length = 639 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + + + D Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAELVGD-YYILNGGKIFITNADKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ YA+ R G + Q ++ +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIASQALGIAQGAYEHALEYAKERVQFGKPIAQQQIISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A E K E MA K + + V+ +A++ GGS Sbjct: 289 ATKLRAARFLVYSAA----ELKENHEPFGMESAMA---KQYASDICLEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|121595129|ref|YP_987025.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|222111471|ref|YP_002553735.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|120607209|gb|ABM42949.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] gi|221730915|gb|ACM33735.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 157/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDELKATYLEKLVTGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ DG Y + G K F++ D ++LA+V G + F+V Sbjct: 171 DLALVRTKADPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNQDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDNGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKR- 357 M I++ + V G+ V+ +A+ YAR R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVQYARDRVQSRPVDGSVAGSAAIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A + +A A ++ A+ +A+ R + A + M P+ K + +M+ V Sbjct: 348 LMTMRAYTEGCRAMATTAAAAYDAAHHHPDAEVRKQNAVFYEFMVPLVKGYSTEMSLEVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|33597649|ref|NP_885292.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33574077|emb|CAE38401.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 608 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 65/332 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+T + + + PK+ ++ T + LTE + G+ Sbjct: 124 LCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + ++ + DG Y LSG K F++ +++ I L A V+G + F+ Sbjct: 171 DLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKG-ISLFI 229 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS--------NTFGFLLGDLNV 304 VP+ L EDGS N + L++K+G + T L + G+L+G+ N Sbjct: 230 VPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANR 289 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LID 351 +E M I +++A SV + ++E A YAR R I + Sbjct: 290 G---LEYM--FIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAH 344 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 P ++R + + A A+S+ A + D +A+ R+ A+ + PI K + Sbjct: 345 HPDVQRMLLTMRALTEGARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFST 404 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V + ++ GG G+IEE A+HYR++ Sbjct: 405 ESAVEVASLGIQVHGGMGFIEETGAAQHYRDA 436 >gi|85708606|ref|ZP_01039672.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1] gi|85690140|gb|EAQ30143.1| putative acyl-coa dehydrogenase protein [Erythrobacter sp. NAP1] Length = 601 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 51/363 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + A+ + + + PK+ S E+ T + LTE GT Sbjct: 126 MYPGLTNGATAAIEAAGSQEQKETYLPKMISGEWSGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ + +DG + ++G K F+S+ D ++LA+ G + F+V Sbjct: 173 DLGMIRTKAEPQADGSFKITGTKIFISAGEHDLTSNIIHLVLAKTPGAPDSAKGISLFIV 232 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + E+G P NG+ ++ K+G N+T L + G+++G+ N + M Sbjct: 233 PKYILDENGEPGERNGVVCGSIEKKMGIHGNSTCVLNYDEATGYMVGEENKGLAAMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGILID--------QPVMKRAIAD 361 L I ++ VS ++YA RR R ++G D P ++R + D Sbjct: 293 NAARLGVGIQGLAQAEVSYQNGVNYALDRRQGRALTGPADKDSKADPIFVHPDVRRMLMD 352 Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEA 415 + AL A D K+++EE +M P+ K + + Sbjct: 353 AKVFNEGMRALCLWGALQVDLTHKAQTEEERQLADDLIGLMTPVIKGYGTDKGYDIANNM 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 + GG GYI E + + R++ I G+ +D+ L KG + F L+ Sbjct: 413 QQVYGGHGYISEWGMEQFVRDARIAMIYEGTNGVQAMDLCGRKLASKGGRAIQAFFKMLD 472 Query: 474 QDL 476 ++ Sbjct: 473 DEI 475 >gi|331238719|ref|XP_003332014.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311004|gb|EFP87595.1| short-chain specific acyl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 446 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 26/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P TS L+E G+D A+ ++ K S+G Y ++G K W +S ++ F++ A Sbjct: 177 PDLSTSKVACFCLSEPASGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFAN 236 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 ++ G CFL+ + + G+ + + K+G ++++T L F N +L Sbjct: 237 LDPSKGYKGISCFLLEKSM------GVEIAKKEEKLGIKASSTCTLNFDNV-KVPKENLI 289 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 G I I L+ + ++ V LA+ A+ Y +R G + + M+ Sbjct: 290 GQEGLGYKYAIEI-LNEGRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQ 348 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AD+ +I AA L++ A +E K +E MA + K + ++A A+E Sbjct: 349 FADVHTEIEAARMLTYNAARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEW 401 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG G+ E I +++R+S +I GS N + ++K Sbjct: 402 CGGVGFTRETGIEKYWRDSKIGAIYEGSSNIQRQTLAKFIQK 443 >gi|149376537|ref|ZP_01894298.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149359204|gb|EDM47667.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 374 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 21/260 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVP 259 LTE GG+D+ ++ Q DG + L+G K +++ + SD + +LA+ E G F V Sbjct: 122 LTEIHGGSDVWGARTRAQ-YKDGQWVLNGQKRYITNASRSDWYSVLARTGENSFGVFAVH 180 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILI 316 + S GL + +L++K+G R + T ++ F LLGD + D L Sbjct: 181 K-----SDPGLSFGKLESKMGVRGSPTADVIFEECRVDDYRLLGDSKEGRQYITDS--LA 233 Query: 317 YLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 Y I ++ + +L AI Y + R V G + +++ I D+A +I A+ L + Sbjct: 234 YTRPLIGAQALGIAQGALDAAIKYVKEREVFGQQVARFQMIRGTIGDLATEIEASRQLLY 293 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R + + + AR +A + K +C +A V E+++ GG+GY+ + + R Sbjct: 294 RSCEAVENKEPE------ARTLASMAKLFCSNVAMKVATESVQLHGGAGYLTDFPVERMM 347 Query: 435 RESPANSILLGSGNAMVLDV 454 R++ I G+ L V Sbjct: 348 RDAKITQIYEGTSEIQKLIV 367 >gi|226946604|ref|YP_002801677.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226721531|gb|ACO80702.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 601 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGLLRTRAEPQADGSYRVSGTKIFISAGEHDLAENIVHIVLARLPDAPPGT 224 Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L +D G+ N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPADDGGLGARNQVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ AI YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGAIRYARERLQMRALSGPKAPELPADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + I AL + A D A+ + A A + PI K + + Sbjct: 345 DVRRMLLTIKAFAEGNRALLYFSARQVDIARCSQDAAERAAADLLLGFLTPIAKAFMTET 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 + ++ GG GYI E + ++ R+S + G+ LD+L L+ +G +L Sbjct: 405 GFEASSLGLQVYGGHGYIREWGMEQNLRDSRIAMLYEGTTGVQALDLLGRKVLMTQGESL 464 >gi|254283095|ref|ZP_04958063.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR51-B] gi|219679298|gb|EED35647.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR51-B] Length = 587 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 40/321 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE G+D+ + ++ ++ D Y + G K +++ DA ++LA++ E Sbjct: 163 MNLTESGAGSDLGPMKTRAEREGD-HYRIFGQKIYITWGDHDANENIIHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G G FLVP+ L +DGS N + +++K+G + T + + + G+L+G Sbjct: 222 GSRGISLFLVPKFLVNDDGSLGARNDVYPVSVEHKLGIHGSPTCVMAYGDNDGAIGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAI 359 + N + M L + + + +A+ YAR R V GG+ +I+ +KR + Sbjct: 282 EENNGLACMFTMMNEARLKVGLQGLGTSEGAYQQAVDYARER-VQGGVPIIEHADVKRML 340 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAE 414 + A AL+F A + D A EEA +M P+ K W ++ V + Sbjct: 341 LTMRALNEAMRALAFSEAVTMDLAHYGPEEARTPNQRRIDLMIPVIKGWLTEVGLEVTSN 400 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 ++ GG GY+EE A++ R+ SI G+ D+LN + + Sbjct: 401 GVQVHGGMGYVEETGAAQYMRDVRIASIYEGTNGIQAADLLN-------------RKVGR 447 Query: 475 DLGSSGKKVITILRDSISLCK 495 D G++ + V +RD++ K Sbjct: 448 DGGATMEAVQQEIRDTVEALK 468 >gi|296135828|ref|YP_003643070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295795950|gb|ADG30740.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 594 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/394 (22%), Positives = 172/394 (43%), Gaps = 70/394 (17%) Query: 152 MSPSVTSASMVALMTT--PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLSDGAIEALLTAGIDAQKQRYIPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + S+ + DG Y L G K +++ M+D + L A V+G + F+ Sbjct: 171 DLALVRSRAEPQGDGTYRLFGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKG-ISLFI 229 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 VP++LEDG N + +++K+G +++ T L + + G V TG + ++ Sbjct: 230 VPKVLEDGRRNDVWCASIEHKLGIKASPTAVLIYGDGKG------EVGTGAIGELVGEAN 283 Query: 313 ----KILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI-----LIDQPV 354 + I +++A +V +++AE A + R V G ++ P Sbjct: 284 RGLEYMFIMMNAARYAVGLQGIAVAERAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPD 343 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKM 407 ++R + + AL+ A+ D ++ + EAAY + P+ K + +M Sbjct: 344 VRRMLMTMRALTEGCRALALVAASLHDVGRAHPDAGQRAAHEAAY-EFLVPLVKGYSTEM 402 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL- 464 + V + ++ GG G+IEE A++YR++ +I G+ D++ + G L Sbjct: 403 SIEVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVGRKTVRDGGALA 462 Query: 465 --FEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F S +E+ L ++G + + +E Sbjct: 463 LHFAARVSKVEEALTATGDAQAVAMAGQLRQARE 496 >gi|256371531|ref|YP_003109355.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008115|gb|ACU53682.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 379 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 37/266 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQVEGRVGCF 256 GLTE G+D A ++ ++++D + L G K +++ +P++ + A+ + + F Sbjct: 123 FGLTEPEAGSDAGATRTRAERVAD-RWRLRGEKAYITNSGTPITSVVTVTARTDEGISAF 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVED 311 +VP GL K+G R+ S+T G +L D V P Sbjct: 182 IVP-----AGTAGLTVLPSYRKLGWRA--------SDTHGIVLEDAEVGDDALLGAPGAG 228 Query: 312 MK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 + L LD ++++ + + L EA + +A+ R+ GG + + +AD+ + Sbjct: 229 FRQFLATLDEGRVAIAALALGLQEACLREGLEWAKARNAFGGPIGRFQAIAFKLADLEVA 288 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ L +R A D+ + + EAA I K + + A + EA + +GG+G+I Sbjct: 289 VEASRHLVYRAAWLRDQGRPFAREAA-------IAKLYATEAAVSAAREATQILGGAGFI 341 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 E+ +AR+YR+ A + +G G + + Sbjct: 342 EDTPVARYYRD--AKILEIGEGTSEI 365 >gi|85717536|ref|ZP_01048481.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] gi|85695653|gb|EAQ33566.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] Length = 593 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 107/462 (23%), Positives = 198/462 (42%), Gaps = 70/462 (15%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 +V P W RR G + + F A ++ A + G + P Sbjct: 70 RVTTAPGWADAYRRWTAAGWNAVSGPQDFGGQGLPLAINAACTEIWSAANIAFG--LCPL 127 Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T +++ AL T + K + K+ S E+ T MQ LTE + G+D+ A Sbjct: 128 LTLSAIEALHTHGNDTLKKIYLEKLVSGEWTGT----MQ---------LTEPQAGSDVGA 174 Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----EGRVGC--FLVPRLL 262 + S+ ++ +DG Y + G K F++ M+D + +LA++ +G G FL+P+ + Sbjct: 175 LRSRAERATDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPDGTRGISLFLIPKFV 234 Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 D G+ N + +++K+G ++ T + + G+L+G+ N + M Sbjct: 235 VDADGSLGARNDIHASGIEHKLGIHASPTCTMTMGDDGGAIGYLIGEENRGMRCMFTMMN 294 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI------LIDQPVMKRAIADIALDI 366 L + V + +A+ YA RR+ + G +I P ++R + + Sbjct: 295 QARLAVGLEGVGIADRACQQALAYALERRQGRAAGTSDGMSPIIAHPDVRRMLMQMRALT 354 Query: 367 AAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 AAA A+ + A S D A R+ AA ++ PI K + + V + ++ G Sbjct: 355 AAARAICYATAVSLDVATRAADPDVRAAAAARGALLTPIAKAFSTDIGNEVASLGIQVHG 414 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-------------LLEKGTNLFEQ 467 G G+IEE A+HYR+ SI G+ +D++ LL+ + + Sbjct: 415 GMGFIEETGAAQHYRDVRITSIYEGTNGIQAIDLVTRKLAADGGAAVSALLDDMSATVHR 474 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 + + E G++G K LRD++ + ++L E++A Sbjct: 475 VEALNEAAFGTTGMK----LRDALGSLER---AGKWLLERLA 509 >gi|307195515|gb|EFN77401.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial [Harpegnathos saltator] Length = 340 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 24/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ G+ D + ++G K W ++ + I+ A + + Sbjct: 81 LSEPGNGSDAGAASTVGKANGD-TFIINGTKAWITNAFEAGGIILFAATDKAKKHKGISA 139 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316 + D GL + ++K+G R ++T L F + +LG+ + KI ++ Sbjct: 140 FIVDSPTVGLTLGKKEDKLGIRGSSTCSLIFEDCEVPKDQILGEEGMG------FKIAMM 193 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++G + +A+A + YA +R G +I +++ IAD+AL + + Sbjct: 194 TLDAGRIGIAGQALGIAQASLDCAMEYASKRQAFGAPIIKLQSIQQKIADMALRVDGSRL 253 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++R A D K ++EAA A++ A T +C + ++ +GG GY+ + Sbjct: 254 LTWRAAQMKDAGKPFTKEAAMAKLSASETATFCAH-------QCIQILGGMGYVTDMPAE 306 Query: 432 RHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 307 RHYRDARITEIYEGT 321 >gi|126651843|ref|ZP_01724044.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] gi|126591311|gb|EAZ85419.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] Length = 552 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 20/272 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + ++G K W ++ ++D F++ AQ + +V Sbjct: 136 LTESDAGSDALRPKTNARLTEDGTAWIVNGEKQWITNAQLADVFVVFAQTHNGMTALIVE 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL- 315 R S G+ + + K+G + ++T L + +LG+ V G + M IL Sbjct: 196 R-----SFKGVSVGQEEEKMGIKGSSTATLILEDVIVPIDHVLGE--VGKGHIVAMNILN 248 Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ + + A++Y + R ++D +++ +AD+A+ I A + ++ Sbjct: 249 MARLKLAFSNIGTAKQAFQLAVNYGKGRRQFERSIVDFTMIQEKLADMAVLIYGAESAAY 308 Query: 375 RLANSFDEA-KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 R A DEA S S+E +I + K C + + EA++ GG GY++E Sbjct: 309 RTAGKMDEAIASGSKETMVQKISDFALECALHKVHCSEALGKIADEAVQIHGGYGYMQEY 368 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R YR++ + I G+ L + +L K Sbjct: 369 DVERLYRDARISRIFEGTNEINRLTLAKMLWK 400 >gi|311748610|ref|ZP_07722395.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1] gi|126577134|gb|EAZ81382.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1] Length = 379 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 33/284 (11%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +F E P T +G GLTE G+D + + K D + L+G K F++ Sbjct: 100 LFGSEEQKQKYLPKLATCELLGAWGLTEPNTGSDAGNMKTVAVKDGD-YWILNGAKNFIT 158 Query: 237 SPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +S ++ G VG F+V R G+P G R ++K+G R++ T E+ Sbjct: 159 HGVSGDLAVVIARTGEVGDSHGMTAFIVER----GTP-GFKGGRKEDKLGMRASETAEMI 213 Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 F + +LG NV G ++ MK+L D +S++ + + +AE +I Y++ R Sbjct: 214 FEDCKIHESQVLG--NVGDGFIQSMKVL---DGGRISIAALSLGIAEGALEASIQYSKER 268 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + +AD+A + AA L + ++ K+R E+ A A KY Sbjct: 269 EQFGKPISRFQGISFKLADMATQVEAAKLLIMKASD----MKNRGEKVTLASAQA---KY 321 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ +V EA++ GG G+ ++ + ++YR+S +I G+ Sbjct: 322 YASEVCVSVSNEAVQIFGGYGFTKDYPVEKYYRDSKLCTIGEGT 365 >gi|299066892|emb|CBJ38087.1| putative Butyryl-CoA dehydrogenase (bcd) [Ralstonia solanacearum CMR15] Length = 594 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEAQKQLYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKVFGTKIFITWGEHDMAGNIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G+ N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVNADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 288 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + A AL++ A ++ D+A + EA Y + P+ K W +M+ V Sbjct: 348 LLTMRAMTEGARALAYVAAAACDAGHHAADDATRKQNEALY-EFLVPVVKGWSTEMSIDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDA 432 >gi|217973729|ref|YP_002358480.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS223] gi|217498864|gb|ACK47057.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|114563286|ref|YP_750799.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334579|gb|ABI71961.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina NCIMB 400] Length = 585 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE G+D+ I ++ + + DG Y ++G+K F++ D ++LA++ G G Sbjct: 164 MDMTEPHAGSDLKGIRTKAEPLDDGSYSITGNKIFITGGDHDLTENVIHLVLAKLPGSKG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 F+VP++ + G NG+ +++K+G +++AT + + N GFL+G+ + Sbjct: 224 ISLFIVPKISVNADGSLGESNGVTVGSIEHKMGLKASATCVMNYDNAKGFLVGEPDRGLV 283 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILIDQPVM-----K 356 + M L + + + + A YA+ R S P++ + Sbjct: 284 CMFTMMNYERLAIGLQGLGNAQAAYQMASDYAKERLQGVAAAGSATGATSDPIIVHGDVR 343 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWCCKMAPAV 411 R + I A ALS D AK S + A Y ++ P++K + Sbjct: 344 RMLLTIRAMTEAGRALSVYTGKQLDLAKYASGDVQAKAARYVGLLTPVSKAFLTDRGLDA 403 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + GG GYI E I + R++ I G+ +D L Sbjct: 404 TVMGQQVFGGHGYIRETGIEQFVRDTRIAQIYEGTNGIQAIDFL 447 >gi|322370176|ref|ZP_08044738.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] gi|320550512|gb|EFW92164.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] Length = 381 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 44/267 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------V 253 ++E G+++A I + ++ D Y + G+K W + ++D +++A+ + + Sbjct: 124 ISEPGHGSNVAGIETVARRDGDE-YVIDGNKMWITNGTVADVAVVMAKTDPEAEPPHRGI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312 LVP ++ P ++ NK+G R++ E+ +L D+ V P E++ Sbjct: 183 SAILVPTDVDGFEPT-----KIDNKLGIRASDLAEI--------VLDDVRV---PTENVI 226 Query: 313 --------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 +++ + S +SV+ V +A E+I YA R G + + + + Sbjct: 227 GEENEGFYQLMDFFASGRVSVASQAVGVAQAAVDESIDYANEREQGGRRIKEYQAIGHKV 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA +L++R A+ D + A A + K + + A V EA++ Sbjct: 287 ADMATDVEAARSLTYRAASHVDSGDDQ-----LATRFASMAKLFASEHAVDVADEAIQVH 341 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY+ + + R+YR++ I G+ Sbjct: 342 GGAGYVTDHPVERYYRDARITKIYEGT 368 >gi|302692004|ref|XP_003035681.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8] gi|300109377|gb|EFJ00779.1| hypothetical protein SCHCODRAFT_52173 [Schizophyllum commune H4-8] Length = 410 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ ++ K+ G Y L+G+K W + P++ F++ A+ E G + Sbjct: 150 LAMSETGSGSDVVSMRTRADKVKGG-YKLNGNKFWITNGPIASTFVVYAKTEPEKGSKGI 208 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E G+P +Q+L +K G R + T EL F + +LG +N + Sbjct: 209 TAFIVEKGTPGFSTHQKL-DKFGMRGSDTCELVFEDCVVPEENVLGQVNRGAAV-----L 262 Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M+ + A+ Y R G + + +M+ IAD+ + A+ Sbjct: 263 MSGLDLERLVLSGGPLGLMQSAFDMAVEYVHDRKQFGQPVGEFQLMQAKIADMYTKLNAS 322 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + +A + D+ + + A A + + + A V EA +C GG+GYI + Sbjct: 323 RSYVYAVARACDKGRISRRDCAGAIL-------YSTEKAIEVCIEAQQCFGGNGYINDYP 375 Query: 430 IARHYRESPANSILLGS 446 I R R+S ++ G+ Sbjct: 376 IGRLVRDSRLYAVGAGT 392 >gi|289650649|ref|ZP_06481992.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 592 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|326317771|ref|YP_004235443.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374607|gb|ADX46876.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 597 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 40/275 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + ++ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQGDGTYKVFGTKIFITYGEHDMAENIVHLVLARVAGAPE 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L + G+ N + +++K+G +++ T L+F + G+L+G Sbjct: 221 GVKGISLFVVPKFLVNADGSLGARNDVQCVSIEHKLGIKASPTAVLQFGDGGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGILIDQP 353 + N +E M I++ + + G+ V+ +A+ YAR R V G + P Sbjct: 281 EENRG---LEYMFIMMNAARYAVGLQGIAVAERAYQQAVQYARDRVQSRPVDGSLPGSAP 337 Query: 354 VMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 ++ RA+ + +A+ A ++ A+ +A +R E A+ M P+ K Sbjct: 338 IIHHPDVRRMLMTMRALTEGCRAMASVAAAAYDAAHHHPDAAARKENQAFYEFMVPLVKG 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +M+ V + ++ GG G+IEE A+HYR++ Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|170758768|ref|YP_001788163.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A3 str. Loch Maree] gi|169405757|gb|ACA54168.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A3 str. Loch Maree] Length = 635 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + S G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNIGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYSKERIQFGKPICHQQIIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A+ + + S EAA A K + + ++ +A++ GGS Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365 >gi|120556795|ref|YP_961146.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326644|gb|ABM20959.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 606 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 44/329 (13%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M T +H D + T AP+ + + LTE + GTD+ + ++ + +DG Sbjct: 135 MNTIYLHGD-------EQQQQTYLAPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEPQADG 187 Query: 225 IYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPN 268 Y L+G K F+SS D I+LA++ +G G F+VP+ L D G N Sbjct: 188 SYKLTGTKIFISSGEHDLTENIVHIVLARLPDAPKGTKGISLFIVPKFLPDAQGGVGERN 247 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 + L+ K+G +++AT + F G+L+G N + + +AI V Sbjct: 248 AVSCGALEKKMGIKASATCVMNFDGATGYLIGPENQGLECMFTFMNTARIGTAIQGVGPA 307 Query: 329 RVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSF- 374 +S A+ YA+ R V+ ++ V + + A+ + L + Sbjct: 308 ELSYQWALDYAKERRSMRALSGKKEPDEVADSLIHHADVRRMLLTQKAIAEGGRSMLYYA 367 Query: 375 -RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++A+ EA + + A + + PI K + ++ M+ GG GYI E Sbjct: 368 AKIADHMVEAHTAGDTAKVEKYDDKLGFLTPILKGFLTELGCEATNLGMQVFGGHGYIRE 427 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456 + + R++ ++ G+ LD+L Sbjct: 428 HGMEQIVRDTRIATLYEGTTGIQALDLLG 456 >gi|327309819|ref|YP_004336717.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326955154|gb|AEA28850.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 591 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 38/310 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ +T++ DG Y +SG K F++S ++D + L A Sbjct: 162 LTEPHCGTDLGLLTTRAVPRGDGAYRISGTKIFITSGDHDLTDNIVHLVLARTPDAPAGT 221 Query: 250 EGRVGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 G + F VP R+ +DG P NG+ L++K+G +AT L F + G L+G+ + Sbjct: 222 RG-ISLFAVPKRRITDDGEPGPANGVHCDGLESKMGLHGSATCVLRFDDAVGHLVGEESR 280 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQ 352 + M L + +M++ + A+ ++R R G + +IDQ Sbjct: 281 GLAAMFVMMNGARLGTGVMALGVAETAGQAALAFSRERLQSRAPGSLHDPAQPADPIIDQ 340 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD---EAKS---RSEEAAYARIMAPITKYWCCK 406 P ++R + + + + L+ D EA R + ++ P+ K + Sbjct: 341 PDVRRMLLTQQAWVGGSRLFLYWLSLQTDLRREATDLGVRVQADDLLSLLTPVAKAFVSD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464 A V + AM+ +GG+GYI + + + R++ I G+ D+L ++ G Sbjct: 401 RAVEVSSLAMQVLGGAGYITDNGVEQSLRDARILPIYEGTNGVQAHDLLARKVIGDGGRR 460 Query: 465 FEQLFSTLEQ 474 +QL + Q Sbjct: 461 MKQLLEMVSQ 470 >gi|321311473|ref|YP_004203760.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5] gi|320017747|gb|ADV92733.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis BSn5] Length = 380 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 36/324 (11%) Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 Y +A E G S ++ A+ V+L +P + + E T+ P+ + Sbjct: 69 YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256 GLTE G+D +Q + IS+G Y ++G K ++++ +++ V G+ G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++ L+ GL +K+G R + T E+ + LLGD P + K Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +Y LD +S++ + V +A+A + YA+ R G + ++ +AD+A++I Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + A D + ++EAAYA++ A +MA +A++ GGSGY++E Sbjct: 295 LARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347 Query: 428 RSIARHYRESPANSILLGSGNAMV 451 + R R+ A + +G G + + Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369 >gi|169600779|ref|XP_001793812.1| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15] gi|160705514|gb|EAT89972.2| hypothetical protein SNOG_03241 [Phaeosphaeria nodorum SN15] Length = 927 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 126/266 (47%), Gaps = 30/266 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +++ DG Y L+G K W + P + ++ A+ E + Sbjct: 661 LAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKGI 719 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + D + G + +K+G R + T EL F + F LGD+N +++L Sbjct: 720 TAFIVDTTSKGFSITKKLDKLGMRGSNTGELVFDDVFVPKENTLGDIN------RGVRVL 773 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ SL + Y +R G + +++ +AD+ A+ Sbjct: 774 MEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGYPIAHNQLVQGKLADMYTKFRAS 833 Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A ++ +A + DE+ + R+++ A A + + + A V A+A++ +GG GY+ Sbjct: 834 QAFTYSIARAVDESHADPVIRTQDCAGAIL-------YAAERASEVAADAVQLMGGMGYM 886 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 E + R R++ I G+G + V Sbjct: 887 NEVPVGRILRDAKLYEI--GAGTSEV 910 >gi|70729290|ref|YP_259027.1| hypothetical protein PFL_1908 [Pseudomonas fluorescens Pf-5] gi|68343589|gb|AAY91195.1| fadE13 [Pseudomonas fluorescens Pf-5] Length = 382 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 19/260 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + Q + + DG Y LSG K F++S + F +A G G + Sbjct: 127 LAVTEPGGGSDVANL--QTRAVRDGDHYRLSGSKTFITSGVRADFYTVAVRTGEPGYGGI 184 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 LL E G+P G R K+G ++ T EL F + G L+G N+ + Sbjct: 185 SLLLVEKGTP-GFTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQ 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+M+ +++L E++ +AR R G + V+K +A++A + + ++ Sbjct: 244 SERLALALMANMTSQMALEESLKWAREREAFGKPIAKFQVLKHRLAEMATALEVSREFTY 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A KS +E + A+ A T A + +A++ +GG GY+ E + R Y Sbjct: 304 RQAAKMAAGKSVIKEISMAKNFATDT-------ADRITHDAVQILGGMGYMRESLVERLY 356 Query: 435 RESPANSIL-LGSGNAMVLD 453 R+ N IL +G G V++ Sbjct: 357 RD---NRILSIGGGTREVMN 373 >gi|270157370|ref|ZP_06186027.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968] gi|289164236|ref|YP_003454374.1| acyl CoA dehydrogenase, short chain specific [Legionella longbeachae NSW150] gi|269989395|gb|EEZ95649.1| acyl-CoA dehydrogenase [Legionella longbeachae D-4968] gi|288857409|emb|CBJ11237.1| acyl CoA dehydrogenase, short chain specific [Legionella longbeachae NSW150] Length = 384 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 45/375 (12%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P + WD+ ++ P A+LR + G+ + + E + Q ++ +A L+ QL Sbjct: 26 PMADNWDEHDYFPI--AVLREAAALGMAGMM---AREDIGGAQLTRLDSALLF--EQLAT 78 Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 G + + + S S+V + W PK+ S E V LT Sbjct: 79 GCISTSAYLSIHNMVTSLVDRYAHSELRTQWGPKLTSME-------------VLASYCLT 125 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262 E G+D A++ ++ K D Y L+G K F+S +SD ++ + + + L+ Sbjct: 126 EPESGSDAASLKTKAVKDGD-YYVLNGSKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKIL 315 E +P GL + +L+ K+G RS T + F N +GD ++ + +I Sbjct: 185 EKDTP-GLSFGKLEKKMGWRSQPTCIVYFENCRIPIANRVGDEGMGFKIALNALNGGRIN 243 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 I A S+ G L Y R G L + ++ AD+ D AA + +R Sbjct: 244 I----ASCSLGGALACLRLTQAYMHERKQFGKPLSEMQALRFYFADMLTDYEAARLMVYR 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 AN+ D+ + + + K + +A + +AM+ GG GY+ + I R +R Sbjct: 300 AANAMDKNEPN------VPMYCAMAKRFATDVAFRISDKAMQIHGGYGYLRDYQIERIFR 353 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 354 DLRVHQILEGTNEIM 368 >gi|161522396|ref|YP_001585325.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189348728|ref|YP_001941924.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] gi|160345949|gb|ABX19033.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189338866|dbj|BAG47934.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] Length = 596 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDG+ N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + PI K W +M V Sbjct: 348 LGTMRGLTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|169342202|ref|ZP_02863287.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495] gi|169299686|gb|EDS81743.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495] Length = 378 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + +K D Y L+G K F++ +P+S FI+ A + G + Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGSKGL 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G+ ++++K G +S E+ F++ ++ N+ + KI + Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEGDGFKIAMKT 237 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AE A Y + R G L Q + +A++A++I A + Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E K S AA A+++ C A V EA++ +GG+GY+ E + R Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 351 MMRDAKITQIYEGT 364 >gi|16078887|ref|NP_389708.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168] gi|221309717|ref|ZP_03591564.1| hypothetical protein Bsubs1_10061 [Bacillus subtilis subsp. subtilis str. 168] gi|221314039|ref|ZP_03595844.1| hypothetical protein BsubsN3_10002 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318961|ref|ZP_03600255.1| hypothetical protein BsubsJ_09916 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323235|ref|ZP_03604529.1| hypothetical protein BsubsS_10037 [Bacillus subtilis subsp. subtilis str. SMY] gi|81669137|sp|O34421|ACDC_BACSU RecName: Full=Probable acyl-CoA dehydrogenase YngJ gi|2266423|emb|CAA74221.1| yngJ [Bacillus subtilis subsp. subtilis str. 168] gi|2634209|emb|CAB13709.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis subsp. subtilis str. 168] Length = 380 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 36/324 (11%) Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 Y +A E G S ++ A+ V+L +P + + E T+ P+ + Sbjct: 69 YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256 GLTE G+D +Q + IS+G Y ++G K ++++ +++ V G+ G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++ L+ GL +K+G R + T E+ + LLGD P + K Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +Y LD +S++ + V +A+A + YA+ R G + ++ +AD+A++I Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + A D + ++EAAYA++ A +MA +A++ GGSGY++E Sbjct: 295 LARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347 Query: 428 RSIARHYRESPANSILLGSGNAMV 451 + R R+ A + +G G + + Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369 >gi|89092176|ref|ZP_01165131.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] gi|89083911|gb|EAR63128.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] Length = 592 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 93/397 (23%), Positives = 176/397 (44%), Gaps = 74/397 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ A+ + ++ + + PK+ S E+ T + LTE GT Sbjct: 125 LCPLLTQGAIEAIEAHGSEQLQQFYLPKLISGEWTGT-------------MNLTEPDAGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257 D+AA+ ++ D Y ++G K F++ M+D + L V+G + F+ Sbjct: 172 DLAALKARAVPEGDH-YRITGQKIFITWGDHQMTDNIVHLVLARLPDAPPGVKG-ISLFV 229 Query: 258 VPRLLEDGSPNG-LCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 VP+ L D NG L +R L++K+G + T + F G+L+G+ N Sbjct: 230 VPKFLLD--ENGELTDKRNDAYAVALEHKLGIHGSPTCVMSFGENEGAIGYLVGEENNGL 287 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI-------LIDQPV 354 + M ++ A V ++++E A+ YA+ R V G + +I+ P Sbjct: 288 ACMFTM-----MNDARQGVGLQGLAISERAYQHALAYAKDR-VQGTLRDGSRITIINHPD 341 Query: 355 MKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKMA 408 ++R + + A AL++ D A+ +++ A ++ PI K W ++A Sbjct: 342 VRRMLMQMKAGSQAMRALTYVAKAESDYYHNATCAEQKAQHKARTELLTPIVKGWITELA 401 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGTNLF 465 + ++ GG G+IEE A+HYR++ +I G+ LD++ L++ G L Sbjct: 402 QEITYLGVQIHGGMGFIEETGAAQHYRDARILTIYEGTTGIQALDLIGRKTLVDNGAAL- 460 Query: 466 EQLFSTLEQDLGSSG----KKVITILRDSISLCKEDK 498 L ++ DL + + V+ +D ++ KE K Sbjct: 461 TALLDEIQGDLNAISSPELQDVVESFQDVLNEAKEAK 497 >gi|302504910|ref|XP_003014676.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371] gi|291177982|gb|EFE33773.1| hypothetical protein ARB_07238 [Arthroderma benhamiae CBS 112371] Length = 610 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 23/244 (9%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 225 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 +V R D P G L +KNK R++ T ++ N + + N+ + Sbjct: 226 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNC---PVPETNMFPEVTGLVGPF 279 Query: 316 IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D A Sbjct: 280 TCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDAAYG 339 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T + ++A DE K+ E M + K C A A E GG+ +E Sbjct: 340 TLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASDEYH 392 Query: 430 IARH 433 I RH Sbjct: 393 IGRH 396 >gi|317402923|gb|EFV83463.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 608 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 50/282 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE + G+D+A + ++ + DG Y LSG K F++ D ++LA+ Sbjct: 161 MNLTEPQAGSDLAQVATRAVRQEDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPP 220 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------T 294 V+G + F+VP+ L DGS N + L++K+G + T L + + Sbjct: 221 GVKG-ISLFIVPKFLVGADGSLGPRNDVWCASLEHKLGIHGSPTAVLLYGSGKGEAGEGA 279 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVS 345 G+L+G+LN +E M I +++A SV + ++E A+ YAR R V Sbjct: 280 VGYLVGELNRG---LEYM--FIMMNAARYSVGQQGIGVSERAYQHALAYARERVQGRAVE 334 Query: 346 GG----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARI 395 G + P ++R + + AA A+S+ A + D+ + R+ A+ Sbjct: 335 GSSAAVAIARHPDVQRMLLTMKALTEAARAVSYVTAAAHDKGTHHPDPEQRARNRAFYEY 394 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 M P+ K + + A V + ++ GG GYIEE A++YR++ Sbjct: 395 MVPVVKGFATESAVEVASLGVQVHGGMGYIEETGAAQYYRDA 436 >gi|330468024|ref|YP_004405767.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] gi|328810995|gb|AEB45167.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] Length = 380 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 17/266 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E +GG+D AA+T++ + D Y ++G K +++ + F + G G + L Sbjct: 126 LSEPQGGSDAAALTTKAARDGDE-YVVTGTKAWITHAHTADFYNIFCRTGGPGPKGISCL 184 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320 L D + G+ Q + +G RS+ +L F + + D + G + I + LDS Sbjct: 185 LADRATPGIAPQTAERTMGLRSSPVAQLVFDDAR--VPADRLIG-GEGKGFTIAMAALDS 241 Query: 321 AIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++ V LA+A + YAR R G +I+ + +AD+A I+AA AL+ Sbjct: 242 GRLGIAACAVGLAQAALDYAVTYARERQQFGRAIIEFQGLGFTLADMATQISAARALTLA 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D + S EAA A++ A +A V +A++ +GG+GY+ + + R++R Sbjct: 302 AARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYFR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461 E+ I+ G+ + + L KG Sbjct: 355 EAKVLQIVEGTNQIQRMVISRALAKG 380 >gi|190575063|ref|YP_001972908.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] gi|190012985|emb|CAQ46617.1| putative butyryl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] Length = 382 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 AIG LTE + G+D A+ + K +DG + ++G K W S P++ ++ A E G Sbjct: 119 AIGAFALTEPQSGSDATAMRCRAVKQADGTFVINGKKSWITSGPVARYIVLFAMSEPDKG 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + L D G + + K+G R++AT E+EF++ ++ +V E KI Sbjct: 179 ARGITAFLIDTDKAGFGRGKTEPKLGIRASATCEIEFND---YVAQAEDVLGQEGEGFKI 235 Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD+ + ++ + +A A + Y + R G + + + IAD+ + A Sbjct: 236 AMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAIGTFQMTQAKIADMKCKLDA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+ R A + K S EAA A++ A W + +A++ GG GY +E Sbjct: 296 ALLLTLRAAWVKGQGKRFSTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEM 348 Query: 429 SIARHYRESPANSILLGS 446 + R++R++ I G+ Sbjct: 349 PLERYFRDAKITEIYEGT 366 >gi|284030163|ref|YP_003380094.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283809456|gb|ADB31295.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 381 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 29/292 (9%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 + T + W PK S E + +G+TE GG+D+A + + +K+ DG Sbjct: 103 LGTEEQKQRWLPKFCSGE-------------LIAAIGMTEPSGGSDLAGLRTSAKKV-DG 148 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K F+++ M+D I + + G + + +G R +K+G Sbjct: 149 GWVLNGSKTFITNGDMADLTITAVRTDPSKGAKGITLFAVEQGMHGFARGRKLDKVGQTE 208 Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338 + T EL F + F +LG+ V G + M+ L + +A+ +++ LAE I Y Sbjct: 209 SGTSELFFEDVFVPEENVLGE--VDRGFIHMMERLAQERVGAAVSNIAHATQILAETIEY 266 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 ++R G + K IA++ A + DE + + +AA A Sbjct: 267 VKQRKAFGQPVGSFQYNKFLIAELVTKAEVTQAYVDNAIVAHDEDRLTAVDAAKA----- 321 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W ++ ++ ++ GG GY+ E +AR +R++ I GS M Sbjct: 322 --KWWSAQVQNEILDACVQLHGGYGYMNEYRVARAWRDARVTKIWAGSNEIM 371 >gi|260904523|ref|ZP_05912845.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2] Length = 378 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 24/279 (8%) Query: 183 YDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237 + P +A P T +G L+E G+D+A I + + DG + ++G K W + Sbjct: 94 FSPEQEARLLPKVATGEYLGAFALSEAEAGSDVANIRCKATRADDGGWVINGTKMWCTFA 153 Query: 238 PMSDAFIMLAQV----EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +D I+ A+ E R + FLV + + P G+ +K KIG T +L Sbjct: 154 DQADYIILFARTSTDEEKRHRGISAFLVEKNRGE-FPEGMSGTAVK-KIGYFGWKTWDLN 211 Query: 291 FSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 F + LLG+ + +A S+ + +L ++I Y ++R G Sbjct: 212 FDDFHLPADALLGEEERGFYQAVSGLEVGRAHTAARSIGLAQAALEDSIAYLKQRVQFGH 271 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L D ++ +AD+A I A+ AL + + D +EAA + KY +M Sbjct: 272 PLADFQHLRFKVADMAAQIEASRALMYHVCTQIDSGARCDKEAA-------MVKYLAAEM 324 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +EA++ GG+GY ++ ++ RH+R++ I GS Sbjct: 325 AEKVTSEAVQIHGGAGYTKDFAVERHWRDARLTKIFEGS 363 >gi|330892469|gb|EGH25130.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 503 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 77 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 136 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 137 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 196 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 197 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 255 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 256 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 315 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 316 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 375 Query: 466 EQLFS 470 QLFS Sbjct: 376 YQLFS 380 >gi|109090817|ref|XP_001104844.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Macaca mulatta] gi|67971122|dbj|BAE01903.1| unnamed protein product [Macaca fascicularis] Length = 432 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 39/275 (14%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q T+ +G L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V Sbjct: 165 QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWVSSAEYAGLFLVMANV 223 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + +G + + D GL + +NK+G R+++T L F N V Sbjct: 224 DPTIGYKGITTFIVDRDTPGLHIGKPENKLGLRASSTCPLTFENV-------------KV 270 Query: 310 EDMKILIYL----DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQP 353 + KIL + AI S++ R+ +A I Y + R G L D Sbjct: 271 PEAKILGQVGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQ 330 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +A +A + AA L++ A + K +EA+ A KY+ ++A + Sbjct: 331 GLQHQVAHMATQLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTS 383 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +E +GG GY ++ + +++R++ +I G+ N Sbjct: 384 KCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASN 418 >gi|73995317|ref|XP_534712.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short-chain specific, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Canis familiaris] Length = 404 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ Q D + L+G K W +S + A ++ A + + Sbjct: 144 FALSEPGNGSDAGAASTTAQADGDA-WILNGTKAWITNSWEASAAVVFASTDRSLQNKGI 202 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 FLVP +GL + ++K+G R+++T L F + LLG+ P Sbjct: 203 SAFLVPM-----PTSGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 251 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+A ++YA R G L ++ +AD+AL Sbjct: 252 GFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 311 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D+ + ++EAA A++ A + A A+ +A++ +GG GY Sbjct: 312 ALESARLLTWRAAMLKDKKQPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 364 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 365 VTEMPAERHYRDARITEIYEGT 386 >gi|15807914|ref|NP_285573.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6460683|gb|AAF12388.1|AE001863_13 acyl-CoA dehydrogenase, putative [Deinococcus radiodurans R1] Length = 637 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 46/377 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + L+E + G+ +A IT+ DG Y ++G K ++S + ++LA+++G Sbjct: 200 MALSEPQAGSGLADITTTATLRDDGTYSITGTKMWISGGEHELTENIVHLVLARIKGAPA 259 Query: 253 ----VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + FLVPR + DGS N + L +K+G+R L F T G L+G Sbjct: 260 GVKGISLFLVPRYRINPDGSVGESNHVVLAGLNHKLGHRGTTNTLLNFGEGGETIGELVG 319 Query: 301 DLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349 + + M +I + + + + +G SL A + RH S + Sbjct: 320 EPGRGLAQMFHMMNEARIGVGMGAVMSGYAGYLASLEYARDRRQGRHASNRDPQAESVAI 379 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE-----AAYARIMAPITKYWC 404 I+ +KR + + + AL A+ D+ + EE A ++ PI K W Sbjct: 380 IEHADVKRMLLRQKVFVEGGLALGLYAASLVDDLNTGPEEEKADTALLLDLLTPIVKSWP 439 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGT 462 K + +++A++ +GG+GY + + +YR++ N I G+ D+L L + Sbjct: 440 SKYSQEALSDAIQVMGGAGYTRDTPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKLTQANG 499 Query: 463 NLFEQLFSTLEQDLGSSGKK-----VITILRDSISLCKEDKG--LARF--LTEKIALASS 513 + L + DL ++ ++ + T L+++I C G L R L + LA++ Sbjct: 500 RGLQVLLGKMGADLKAAEQEGELSDIRTALQEAIGQCAAALGSLLGRAAELGPDLFLANA 559 Query: 514 AAALYRAGMNDIADVFL 530 AAL G + ++L Sbjct: 560 NAALDMVGHTVVGWMWL 576 >gi|154248365|ref|YP_001419323.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162450|gb|ABS69666.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 626 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249 LTE GTD+ + ++ + DG Y ++G+K F+S+ D ++LA+ + Sbjct: 194 LTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIHLVLARLPDAPKGI 253 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ L EDGS NG+ +++K+G ++T ++ F G+L+G+ Sbjct: 254 KG-ISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGE--- 309 Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQP- 353 P + M+ + ++S +SV + L EA + A + R +SG D+P Sbjct: 310 ---PHKGMRAMFSMMNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPA 366 Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 + RA + +A A + L ++A+ R + +M PI Sbjct: 367 DPIIVHPDVRRTLMTMRAYNEGCRALAGWVARALDLMEHAEDAQERQRAEDFTALMTPIV 426 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + M+ GG GYI + + ++ R++ I G+ LD++ Sbjct: 427 KALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDLVG 482 >gi|152975579|ref|YP_001375096.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024331|gb|ABS22101.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 381 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y ++G K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVINGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP + E GL +K+G R++ T E+ + + Sbjct: 171 VNGVDENGRKRISAFIVPTISE-----GLTISSPYDKMGVRASNTCEIVLEDVRVPRENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERKQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A +I A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEIELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIS 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + V Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEV 369 >gi|313496736|gb|ADR58102.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 592 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPTGPQAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405 ++R + + I A S +A D AK RSEE ++ P+ K + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + GG GYI E + R+ I G+ LD++ Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454 >gi|116748841|ref|YP_845528.1| acyl-CoA dehydrogenase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697905|gb|ABK17093.1| acyl-CoA dehydrogenase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 619 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 85/393 (21%), Positives = 158/393 (40%), Gaps = 69/393 (17%) Query: 151 LMSPSVT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 LM P +T S+ ++ T + + + K+++ E+ T + LTE G Sbjct: 123 LMYPGLTHGSSRLLEKYGTSELKETYLYKMYAGEWSGT-------------MCLTEPDAG 169 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 +D+ + ++ +++ DG Y + G K F+S M D ++LA++EG + F Sbjct: 170 SDVGNLRTRAKRLPDGTYSIRGQKIFISCGMHDLTDNIIHMVLARIEGAPKGVRGISIFA 229 Query: 258 VPRL--LEDG--SPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 VPRL E G + N + L++K+G AT + F G+LLG N + Sbjct: 230 VPRLRVTETGELAENDVVCTGLEHKLGIHGAATCTMNFGENERCVGYLLGKENTGMRIMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRA 358 +M L + + + + A++YA+ R I +I P ++R Sbjct: 290 EMMNEARLFTGLQGLGHASAAYLHALNYAKERRQGALIQHMKHPETPRVPIIRHPDVRRM 349 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWCCKMAPAVI 412 + + AL D +++ E YA ++ P+ K + V Sbjct: 350 LMFMKSSTEGLRALMHLGGYCIDRSRAAEAEEEKELFQGYADLLIPLCKSVGSDLGFRVC 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LLEKGTN 463 A++ GG GY+ E + + R+ SI G+ LD++ L++ N Sbjct: 410 ETAIQVYGGYGYVTEYPVEQFLRDCKIASIYEGTNGIQALDLVGRKLTYRRGLLVKNALN 469 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 E + S + ++ LRD + + +E Sbjct: 470 AIENILSRIRRNFS---------LRDLVRIYEE 493 >gi|28867735|ref|NP_790354.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850970|gb|AAO54049.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 592 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++AA R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLAALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465 Query: 467 QLFS 470 QLFS Sbjct: 466 QLFS 469 >gi|148556505|ref|YP_001264087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148501695|gb|ABQ69949.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 375 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255 LTE G+D AA+ ++ + ++G + L+G K F++S M+ V G+ G Sbjct: 123 LTEADAGSDAAALRTRATR-AEGGWVLNGAKQFITSGKIAGVAMVFAVTDPAAGKKGISA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGP 308 FLVP SP G ++++K+G ++ T + F + F G L G N++ Sbjct: 182 FLVP----TDSP-GYAVDKVEHKLGQAASDTCAIRFDDLFVEDGLLFGAEGRGYNIALAN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I M+ + + +++A YAR R G +I+ + +AD+A + A Sbjct: 237 LEQGRIGIAAQCVGMAQAALEIAVA----YARDRRSMGKPIIEHQAVGFRLADLATRLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A+ D +EA+ A++ A + A A+++ A++ +GG GY+EE Sbjct: 293 ARQLVLHAASVKDAGLPCLKEASMAKLFA-------SEAAEAIVSGAIQTLGGYGYLEEF 345 Query: 429 SIARHYRESPANSILLGSGN 448 +A+ YR+ I G+ + Sbjct: 346 GLAKIYRDVRVCQIYEGTSD 365 >gi|284042015|ref|YP_003392355.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283946236|gb|ADB48980.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 382 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG--CFLV 258 L+E G+D A+ ++ ++ DG W +D + + A+ EG G CFL Sbjct: 127 LSEADAGSDPGAMRARAKRDGDGFRVTGSKAWVTHGGEADFYTLFARTGEGSRGISCFLA 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 P G GL Q + K+G + T ++F + L + E + I L Sbjct: 187 P-----GQAGGLTSQSPERKMGLTGSTTATVDFDDV---ALERDRLVGAEGEGLAIALQA 238 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA+A + +AR+R G +I+ + +AD+A + +A A Sbjct: 239 LDSGRLGIAAVAVGLAQAALDHAVDHARQRQTFGKPIIEHQGLGFLLADMAAAVESARAT 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D S AA A+++A A V +A++ +GG+GY ++ + R Sbjct: 299 MLEAARRRDRGLPFSRHAAIAKLVA-------TDAAMQVSTDAVQVLGGAGYTQDFPVER 351 Query: 433 HYRESPANSILLGS 446 RE+ I G+ Sbjct: 352 MMREAKVMQIFEGT 365 >gi|146296802|ref|YP_001180573.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410378|gb|ABP67382.1| butyryl-CoA dehydrogenase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 381 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 23/257 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D++ I + +K D Y L+G+K W + +D +++ A + G + Sbjct: 122 FALTEADAGSDVSNIKTVAEKNGD-FYILNGNKHWITNGGEADIYVVFAVTDKSKGPRGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + + ++K+G R+++T EL F N LLG TG + MK Sbjct: 181 SAFIVEKGYEGFYFGKKEDKMGIRASSTTELVFENCKVPKENLLG--REGTGFIIAMKT- 237 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D V+ M V +A+ A+ YA+ R G L ++ +AD+ ++I AA Sbjct: 238 --FDRTRPGVAAMAVGIAQGAYEHALKYAKERVQFGQPLSSFQAIQHMLADMYINIEAAR 295 Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL + D AK ++E++ ++ A +A V +A++ +GG+GY+++ Sbjct: 296 ALLYSTCKMIDSGAKDYTKESSACKVFAS-------DVAMKVTIDAVQIMGGNGYVKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 349 VEKMMRDAKVTQIFEGA 365 >gi|72160614|ref|YP_288271.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] gi|71914346|gb|AAZ54248.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX] Length = 607 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 62/356 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ K DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIKQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGHGPGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 + FLVP+ L EDGS NG+ ++ K+G + + T EL F G+L+GD Sbjct: 224 KGLSLFLVPKYLVNEDGSLGERNGVYVTNVEEKMGLKVSTTCELTFGAKHPAIGYLVGDK 283 Query: 303 NVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILIDQ------- 352 + + M ++I ++ +++ + A+ YA+ R V G L Q Sbjct: 284 HDG---IRQMFLIIEYARMMVGTKAIATLSTGYLNALAYAKER-VQGADLTQQADKTAPR 339 Query: 353 ------PVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMA----PI 399 P ++R++ A AL A D A +R E+ A M P+ Sbjct: 340 VTITHHPDVRRSLMLQKSYAEAMRALVLYTATFQDAVQIATARGEDPAEYEAMNDLLLPL 399 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K + + A++AE+++ +GGSGY+++ I ++ R+S +++ G+ +D+ Sbjct: 400 VKGVGSERSYALLAESLQTLGGSGYLQDYPIEQYIRDSKIDTLYEGTTAIQGMDL----- 454 Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515 F ++ Q LG ++ + K D G + E LA +AA Sbjct: 455 ----FFRKIVKNNGQALGK-------LMGEIQEFAKSDPGNGQLKNECALLAQAAA 499 >gi|326381424|ref|ZP_08203118.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL B-59395] gi|326199671|gb|EGD56851.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL B-59395] Length = 391 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 28/297 (9%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 MV TP K W P + S E S+A LTE G+D AA+++ ++ Sbjct: 97 MVDTYGTPEQRKRWVPAMASME------------SIA-SYCLTEPGAGSDAAALSTSARR 143 Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 D + L G K F+S +SD ++++A+ + ++E G+P GL + + K+ Sbjct: 144 DGD-HFVLRGSKQFISGGGVSDVYVVMARTGDAGARGISTFVVEKGTP-GLSFGPPEAKM 201 Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333 G + T ++ F + L G TG M L L+ A S+ G + + Sbjct: 202 GWHNQPTAQVVFDDVRVPADAMLGGPDGQGTGFSIAMNGLNGGRLNIAACSMGGAQSAYD 261 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 +A+ YA R GG LI +P + +A++A + A+ + +R A + D E Sbjct: 262 QALVYATEREAFGGPLIAEPTIAATLAEMATSLEASRLMLWRAAEALDADDPDKVE---- 317 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + K + + V +A++ GG GY+ E I + R+ N IL G+ M Sbjct: 318 --LCAMAKRFVTENCFTVADQALQLHGGYGYLHETGIEKIVRDLRVNRILEGTNEIM 372 >gi|298489175|ref|ZP_07007195.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156312|gb|EFH97412.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 592 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|257077075|ref|ZP_05571436.1| acyl-CoA dehydrogenase, short-chain specific [Ferroplasma acidarmanus fer1] Length = 377 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 22/257 (8%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GL +TE G+D A+I+++ +K G Y ++G K F+S+ ++ F+M A + G Sbjct: 118 GLAITEPGSGSDAASISTRAEKCEGG-YKITGTKTFISNGRIAKFFVMDASTDKSKGYKG 176 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + DG+ GL R +K+G R ++TVEL F F ++G+ N + D Sbjct: 177 ITTFVVDGNAPGLEISRDIHKMGIRGSSTVELNFHEVFVPESNIVGEYNKGFSVIMDT-- 234 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD+ + ++ + +A EA+ Y R +ID ++ IA++ I A+ Sbjct: 235 ---LDAGRIGIAAQALGIARSAFHEALEYINTRKQFNKKIIDFQGIQFMIAEMESRIKAS 291 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A + + E ++ I K + A V +++ GG GY + + Sbjct: 292 DLLIREAAEKWQNHEDTVE-------LSSIAKMYASDTAVYVAERSLQLFGGYGYTTDFN 344 Query: 430 IARHYRESPANSILLGS 446 RH R++ I G+ Sbjct: 345 AERHMRDAKITQIYEGT 361 >gi|121605030|ref|YP_982359.1| acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2] gi|120593999|gb|ABM37438.1| Acyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 386 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 35/283 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP D+ PK+ S E + + LTE G+D A++ ++ + D Y Sbjct: 102 TPEQKSDYLPKVASGE-------------LVMSFALTEPDAGSDAASLKTRAELDGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 LSG K F++ +P + AF ++A+ G V F+VP L G+ + K+G Sbjct: 148 VLSGTKRFITNAPRAGAFTLMARTGGPGAGGVSSFIVPADLP-----GIKLGKTDKKMGQ 202 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334 R T ++ N + N+ G P + K + LD +++S + +A E Sbjct: 203 RGTKTCDVILENV---RVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVACGMAQRILEE 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 ++ YAR R G + + +++ +AD ++ A +L +A FD + + + Sbjct: 260 SVGYARDRKQFGKAIGEFQLIQAMLADSQAELLAGWSLVQDVARRFDGKPAHVSDPDIS- 318 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K +C +M V ++ GG+GYI E + R YR+S Sbjct: 319 MRVSCAKLFCTEMVGRVADRGVQVHGGAGYINEYPVERFYRDS 361 >gi|134299636|ref|YP_001113132.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1] gi|134052336|gb|ABO50307.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1] Length = 379 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257 LGLTE G+D A+ + + DG Y L+G+K F+++ +D ++++A + Sbjct: 123 LGLTEPGAGSD--AVGQKTTAVLDGDEYVLNGNKIFITNGYYADTYVIIAVTDKSKKSKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E G+P G + + ++K+G R++AT EL F N LLG+ + Sbjct: 181 ISSFIVEKGTP-GFSFGKKEHKMGIRASATYELVFENCRIPKANLLGEEGQGF-----KQ 234 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +++ LD + ++ + +A+ AI Y++ R G + ++ +AD+A + A Sbjct: 235 VMMTLDGGRIGIASQALGIAQGALDAAIEYSKIREQFGKPISANQGLQWMMADMATQVEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + ++ A D S+EAA A++ A T A AV +A++ GG GY E Sbjct: 295 ARLMVYQAAYRKDNKMPYSKEAAMAKLFAAET-------AMAVTTKAVQIFGGYGYTREY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 PVERMMRDAKITEIYEGT 365 >gi|238059069|ref|ZP_04603778.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149] gi|237880880|gb|EEP69708.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149] Length = 381 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 19/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E +GG+D AA+T++ + DG Y ++G K W + ++D + + + G G + Sbjct: 126 LSEPQGGSDAAALTTR--AVRDGEAYVVTGTKAWITHARVADFYNIFCRTGG-PGPKGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 LL D G+ Q + +G ++ ++ F + + D + + LD Sbjct: 183 CLLADRDTPGIVPQAAERMMGLHASPVAQIAFDDAR--VPADRLIGGEGAGFTIAMSALD 240 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 S + ++ V LA+A + YAR+R G ++D + +AD A ++AA AL+ Sbjct: 241 SGRLGIAACAVGLAQAALDHAVGYARQRQQFGRAIVDFQGLGFLLADAATQVSAARALTL 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D + S EAA A++ A +A V +A++ +GG+GY+ + + R+ Sbjct: 301 HAARLRDAGRPYSTEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYL 353 Query: 435 RESPANSILLGS 446 RE+ I+ G+ Sbjct: 354 REAKVLQIVEGT 365 >gi|157375429|ref|YP_001474029.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157317803|gb|ABV36901.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis HAW-EB3] Length = 585 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 36/297 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ DG Y ++G K F++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRNIRTKAVPNDDGSYNITGSKIFITGGDHDLTENVIHLVLAKLPDSNG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G NG+ +++K+G +++AT + + + G+L+G N G Sbjct: 224 ISLFLVPKIKVDDSGNLGESNGVTVGSIEHKMGLKASATCVMNYDDAQGYLIGRPN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQ 352 V ++ Y AI + G+ S A A YA+ R +GG IL+ Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMASDYAKERVQGVAAGGSPTGATCDPILVHG 340 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKM 407 V +R + +I A ALS D E + +++ A Y ++ P+ K + Sbjct: 341 DV-RRMLLNIRTLTEAGRALSILTGKQLDIAKYGEGEDKAKAARYVGLLTPVAKAFLSDR 399 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 A + GG GYI E I + R++ I G+ +D L G NL Sbjct: 400 GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNL 456 >gi|291562703|emb|CBL41519.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SS3/4] Length = 383 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 26/270 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD A Q + + DG + L+G K F+++ +D +I++A Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKYADTYIVIA 170 Query: 248 -----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + G++ + ++E G+P G + + K+G R +AT EL F++ + Sbjct: 171 VTGTVEKRGKMQKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDC---RIPKD 226 Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356 N+ E KI ++ LD + ++ + LAE I Y + R G + + Sbjct: 227 NLLGKKGEGFKIAMHTLDGGRIGIAAQALGLAEGALDRTIAYVKERKQFGRTIGQFQNTQ 286 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA + +R A + K+ S EAA A++ + ++A V +A+ Sbjct: 287 FQLADMATKVKAAQMMVYRAAMAKATQKTYSVEAAMAKL-------YAAEVAMEVTTKAV 339 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI E + R R++ I G+ Sbjct: 340 QLHGGYGYIREYDVERMMRDAKITEIYEGT 369 >gi|152997029|ref|YP_001341864.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp. MWYL1] gi|150837953|gb|ABR71929.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1] Length = 592 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/323 (21%), Positives = 142/323 (43%), Gaps = 55/323 (17%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + + + PKI S E+ + + LTE G+D+ A+ ++ DG Y + Sbjct: 144 IQQRYLPKIVSGEW-------------TVAMALTEPNAGSDLGALNTKAVPQQDGTYKIK 190 Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--RLLEDGSPNGLCYQR-- 274 G K +++ D A ++LA+ + F+VP R+ +DGS G R Sbjct: 191 GQKIYITYGDHDLTDNIAHLVLARTPDAPAGSRGISLFIVPKYRVSDDGSLGGFNDVRCT 250 Query: 275 -LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G + T + + + G L+G+LN M + + ++ A +S V Sbjct: 251 GIEHKMGLHGSPTCSISYGDQDDCVGELVGELNQGL-----MAMFVLMNEARLSCGLQGV 305 Query: 331 SLAE-----AIHYARRRHVSGGI------LIDQPVMKRAIADIALDIAAATALSFRLANS 379 +L E A+ YA+ R +++ +KR + ++ + A AL +++A Sbjct: 306 ALGELGYQRALEYAKERTQGTNAQGEKVAIVEHADVKRMLLEMRSETFALRALGYQIAAQ 365 Query: 380 FDEA-----KSRSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D K+ S ++ R+ + PI K + + + + ++ GG G++EE +A+ Sbjct: 366 IDATESAVDKTESNQSKKDRVALLTPIFKAFATERVNVMAGQVIQVFGGMGFVEETGVAQ 425 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 R++ +I G+ D++ Sbjct: 426 IMRDARITTIYEGTTGIQARDLM 448 >gi|116626102|ref|YP_828258.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229264|gb|ABJ87973.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 381 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC--FLV 258 LTE G+D A + + G + L+G K F ++ +D + +A V R + Sbjct: 125 LTEPEAGSDAAGTRTHAETDESGGWVLNGSKTFTTNAHYADVCVAMA-VTDRAAAQHGIS 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKIL 315 L+E +P C ++ +NK+G R++AT E+ F N G LLG LN G V +K+L Sbjct: 184 AFLIEKDTPGYRCGKK-ENKLGLRASATGEVIFENCRLGPTQLLGKLN--DGFVASLKVL 240 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D +S++ + + +A+ A+ Y++ R G + + ++ + D+A+D+ AA Sbjct: 241 ---DGGRISIAALSIGMAQGAYDAALRYSKLRKQFGRPISEFQAIQHKLVDMAVDLDAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A D + E++ A++ A + A + EA++ GG G+I++ + Sbjct: 298 LLNYRAAWMLDRGMRVTRESSMAKLFA-------SEAAVRIAGEAVQIHGGYGFIKDYPV 350 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + YR+ +I G+ L + L K Sbjct: 351 EKFYRDVKLCTIGEGTSEIQRLVIARQLLK 380 >gi|312958586|ref|ZP_07773106.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6] gi|311287129|gb|EFQ65690.1| acyl-CoA dehydrogenase-like protein [Pseudomonas fluorescens WH6] Length = 600 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 53/338 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247 + LTE G+ ++ I ++ + +DG Y L G+K F+S P+S+ + + A Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299 V+G + F+VP+ L +DGS N + L +K+G R + L F N G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGARNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352 G L+ + + +I + + + ++ +G SL YAR R G L D Sbjct: 281 GKPHQGLSCMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334 Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 PV ++A + A D+ A F + D R + ++ Sbjct: 335 ATAPVSIIQHADIKRMLLTQKAYVEGAFDLGLYAARLFDDTTTLDTETERKQAHELLDLL 394 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL- 455 PI K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454 Query: 456 -NLLEKGTNLFEQLFSTLEQDLGSSGK-KVITILRDSI 491 L + G +QL + + + K +T LR + Sbjct: 455 RKLAQNGGAGLKQLIRLIAETAARAQKYPSLTALRTPL 492 >gi|312963448|ref|ZP_07777930.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] gi|311282254|gb|EFQ60853.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] Length = 589 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 47/338 (13%) Query: 152 MSPSVTSASMVALMTTPRV-HKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T +M A+ V KD + K+ + E+ T + LTE GT Sbjct: 125 MYPGLTHGAMSAIHAHGTVEQKDTYLNKLTAGEWTGT-------------MCLTEAHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257 D+ I ++ +DG Y ++G K F+S+ MS I L A +G + F+ Sbjct: 172 DLGLIKTRAVPQADGSYAVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKG-ISLFI 230 Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VP+ D G N + +++K+G +++AT L F GFL+G+ N + M Sbjct: 231 VPKFHADSGERNAVHCGAIEHKMGIKASATCVLNFDGAKGFLIGEANKGLNCMFTMMNHA 290 Query: 317 YLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ---PVMKRA-IADIALDIAA 368 L + + + S AI YA + R ++G D+ P++ A + + L + A Sbjct: 291 RLGTGMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPDKAADPIIVHADVRRMLLTMKA 350 Query: 369 AT----ALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AL++ A D +A R E + PI K + + V M+ Sbjct: 351 FNEGNRALTYLTAQLLDTAHLSSDAGQRQEAEDLLAFLTPICKAFMTETGLEVTNHGMQV 410 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GYI E + + R++ I G+ LD+L Sbjct: 411 FGGHGYIREWGMEQLARDARIAPIYEGTNGIQALDLLG 448 >gi|187778569|ref|ZP_02995042.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC 15579] gi|187772194|gb|EDU35996.1| hypothetical protein CLOSPO_02164 [Clostridium sporogenes ATCC 15579] Length = 635 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D + D Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAVLEGDN-YVLNGEKIFITNAGEADIYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + S G + + +K+G RS+AT EL +L D+ V Sbjct: 172 TTPNIGTRGISAFIVEKSFQGFSFGKHYDKMGIRSSATAEL--------ILNDVKVPKEN 223 Query: 309 V-----EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 + E KI + LD + ++ + +A+ A+ Y++ R G + Q ++ Sbjct: 224 LLGKEGEGFKIAMSTLDGGRIGIAAQAIGIAQGAYENALEYSKERIQFGKPICHQQIIAF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A + AA L + A+ + + S EAA A K + + ++ +A++ Sbjct: 284 KLADMATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GGSGY++ + R YR++ +I G+ Sbjct: 337 IFGGSGYMKGMEVERAYRDAKICTIYEGT 365 >gi|255527687|ref|ZP_05394545.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|296185563|ref|ZP_06853972.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7] gi|255508631|gb|EET85013.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|296049691|gb|EFG89116.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7] gi|308066799|gb|ADO12110.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7] Length = 379 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 38/274 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD +A Q Q I +G Y L+G K F+++ +D F++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDSSA--QQSQAILEGDHYILNGQKIFITNGAYADVFVVFA 170 Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + G + +LE G P G + +++NK+G R+++T EL F D+ V Sbjct: 171 MTDRSKGNKGISAFILEKGMP-GFSFGKVENKLGIRASSTTELVFE--------DVKV-- 219 Query: 307 GPVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQ 352 PVE++ K A+ ++ G R+ +A EAI Y + R G L Sbjct: 220 -PVENLIGKEGKGFAVAMKTLDGGRIGIAAQALGLAEGALDEAIKYMKERKQFGKTLSRF 278 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + +A++ + I AA L ++ A R E I A K + + A V Sbjct: 279 QGLAWMVAEMDVKIEAARNLVYK-------AAMRKENGLPFTIDAARAKLFAAETAMEVT 331 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY ++ + R R++ I G+ Sbjct: 332 TKAVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365 >gi|114563210|ref|YP_750723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334503|gb|ABI71885.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina NCIMB 400] Length = 598 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 46/294 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y LSG K F+S+ D I++A++ G Sbjct: 164 LTEPHCGTDLGMLRTKAELQADGTYSLSGTKIFISAGEHDLSDNIVHIVIARIPGAPEGN 223 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + EDG+ NG+ +++K+G NAT + F G L+G+ Sbjct: 224 KGISLFIVPKFNVNEDGTISDRNGVSCGSIEHKMGINGNATCVINFDGATGHLIGE---- 279 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSG--------G 347 P +K + ++++A + V+ V+ AE A+ YA+ R +SG Sbjct: 280 --PNRGLKCMFTFMNAARIGVASEGVAAAEASFQGALAYAKDRLQMRSISGVKNPNGPAD 337 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITK 401 +I P ++R + AL LA D + +EA A ++ PI K Sbjct: 338 PIIVHPDVRRMLLTQKSIAEGGRALISYLAQLVDIGHAEKDEAIKADAETKLALLTPIAK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ + ++ GG G+I+E + + R++ + + G+ LD+L Sbjct: 398 AFLSELGFECTSHGVQIFGGHGFIKEWGMEQLMRDTKISCLYEGTTGIQALDLL 451 >gi|90422668|ref|YP_531038.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90104682|gb|ABD86719.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 615 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 104/469 (22%), Positives = 201/469 (42%), Gaps = 71/469 (15%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KV P W +R I G + D +F A ++ + + G + P Sbjct: 92 KVTTAPGWPDAYQRWIAAGWNAVSGDEAFGGQGLPLALNAACTEIWAASNVAFG--LCPL 149 Query: 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T +++ AL + + K + K+ S E+ T MQ LTE + G+D+ A Sbjct: 150 LTLSAIEALDAHGSDALKKIYLEKLVSGEWPGT----MQ---------LTEPQAGSDVGA 196 Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLL 262 + S+ ++ DG Y + G K F++ M+D + +LA++ + FL+P+ L Sbjct: 197 LRSRAERYGDGSYRIIGSKIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFL 256 Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 + G N + +++K+G + T + + G+L+G+ N + M Sbjct: 257 VNADGSLGERNDIYPTGIEHKLGMHAAPTCTMTIGDHGGAVGYLVGEENRGMQCMFTMMN 316 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKR------AI 359 L + V + +A+ +A+ R I +I P +KR A+ Sbjct: 317 QARLAVGLEGVGIADRAYQQALAFAQDRKQGRAIGEKPSKSDPIIVHPDVKRMLLQMRAM 376 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A I ATA++ +AN D+ ++ A A ++ PI K + + V + ++ Sbjct: 377 TAAARTICYATAVAIDIANRSDDPAIKAAAATRAALLTPIAKAYATDIGNEVASLGVQVH 436 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL------NLLEKGTNLFEQLFSTLE 473 GG G+IEE A+H+R++ I G+ +D++ N E L +L +T++ Sbjct: 437 GGMGFIEETGAAQHFRDARITPIYEGTNGIQAIDLVTRKLAPNGGEAVWALISELSATVD 496 Query: 474 Q-------DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515 + G++G K LR++++ + +++L E++ A + A Sbjct: 497 EVEASNDPSFGTTGAK----LREALAALER---ASKWLLERVVSAPNDA 538 >gi|330807159|ref|YP_004351621.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375267|gb|AEA66617.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 600 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 48/312 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248 + LTE G+ ++ I ++ + SDG Y L G+K F+S P+S+ + +LA+ Sbjct: 162 MALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPP 221 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L +DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344 G L+ + + +I + + + ++ +G SL YAR R Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQGRVPDSKDPTT 336 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398 + +I ++R + + + L A FD+ + EA R ++ P Sbjct: 337 APVAIIQHADVRRMLLTQKAYVEGSFDLGLYAARLFDDTTTLESEAERRRAHELLDLLTP 396 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456 I K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 397 IVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRK 456 Query: 457 LLEKGTNLFEQL 468 L + G +QL Sbjct: 457 LAQNGGAGLKQL 468 >gi|153004998|ref|YP_001379323.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028571|gb|ABS26339.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 380 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253 LTE G+D A + + + D Y L G K F+++ P +D ++ A + + Sbjct: 123 FALTEPMSGSDAAEMRTVAARRGDE-YVLDGSKNFITNGPQADVLLVFAMTDKAKKHKGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP G + K+G R++ + + F F LG+ + Sbjct: 182 SAFLVP-----SDAKGFTRGKPDEKVGIRASGSCSVFFEGCAIPARFRLGEEG------D 230 Query: 311 DMKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + V+G R + EA YA+ R G ++ ++ +AD+A Sbjct: 231 GFKIAMATLDGGRIGVAGQALGIARAAFDEARAYAKERKAFGQVISSFQAIQFMLADMAT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA L +R A D S E+A A K + +M+ V ++A++ GG GY Sbjct: 291 EIDAARLLVWRAATLKDRGVRHSAESAMA-------KLYASEMSERVTSKAIQIHGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 ++E + RH+R+S I G+ Sbjct: 344 VKEYDVERHWRDSRITEIYEGT 365 >gi|87122711|ref|ZP_01078586.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121] gi|86162008|gb|EAQ63298.1| probable acyl-CoA dehydrogenase [Marinomonas sp. MED121] Length = 587 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 56/344 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE G+D+AAI ++ D + +SG K F++ M+D I L A Sbjct: 161 MNLTEPNAGSDLAAIAAKATPNGDH-FLVSGQKIFITWGDHQMTDNVIHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + FLVP+ L +DGS N + ++ K+G ++ T + F G+L+ Sbjct: 220 GVKG-ISLFLVPKYLVKDDGSLGERNDVTVVSVEKKLGIHASPTCVMSFGENQGAIGYLV 278 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG-------- 346 G + M + +++A V +++AE A+ YA+ R V G Sbjct: 279 GQEHQGI-----MAMFTMMNNARQGVGLQGLAIAERAYQQALDYAKDR-VQGMSADRSKR 332 Query: 347 GILIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I+ P + R + + I A + A+ LAN+ + RS + + PI Sbjct: 333 APIIEHPDVLRMLMTMKSQIDAMRSLVLSAAVEIDLANATQGPEQRSHKE-RVNMYTPIV 391 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---L 457 K W + A + + A++ GG G+IEE +A+H R++ I G+ LD++ Sbjct: 392 KGWITEQAQEITSLAIQVHGGVGFIEETGVAQHARDARILPIYEGTNGIQALDLIGRKMY 451 Query: 458 LEKG---TNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKE 496 +KG +N E L + ++ + LG G ++ ++L K+ Sbjct: 452 SDKGLGFSNWVEDLTAEVQVAKSLGIKGTDLVLNALSDLTLSKQ 495 >gi|229164290|ref|ZP_04292222.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] gi|228619173|gb|EEK76067.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] Length = 379 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGTKIGAYGLTETGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVIFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A DI AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDIEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|254516972|ref|ZP_05129030.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3] gi|219674477|gb|EED30845.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3] Length = 365 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 21/257 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 I LG+TE GG+D+A++ + + D Y ++G K +++ M ++ A G G Sbjct: 108 ISLGITEPGGGSDVASLRTTAVRDGD-HYIVNGSKTYITGGMRANWVSTAVRTGGDGAGG 166 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 V LL G L K G ++ T L F N L+G+ N + I Sbjct: 167 VSMLLIPTDAEGFSRTSLDRKQGWWASDTATLYFDNVRVPVENLIGEENRGF-----LVI 221 Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +S M ++ RV L +A ++AR R+ G L D V++ A + + A Sbjct: 222 MTNFNSERMFMAASMEALGRVCLEDAANWARERNTFGKRLADHQVIRHKFAMMKQKLNAT 281 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A S + + + A ++ A T +C + EAM+ +GGSGY+ Sbjct: 282 QAYIRVCYESMENGNANPGDIALLKVQASETMEFCAR-------EAMQILGGSGYMRGNR 334 Query: 430 IARHYRESPANSILLGS 446 + R YRE N+I GS Sbjct: 335 VERIYREVRVNAIGGGS 351 >gi|120599237|ref|YP_963811.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. W3-18-1] gi|120559330|gb|ABM25257.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1] Length = 596 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ + A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|313159324|gb|EFR58688.1| acyl-CoA dehydrogenase, C-terminal domain protein [Alistipes sp. HGB5] Length = 575 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/303 (22%), Positives = 134/303 (44%), Gaps = 29/303 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ 248 P + LTE G+D+ A+ + + + L+G K F+++ D ++LA+ Sbjct: 163 PWVSAGATCAMDLTEPDAGSDLGAVMLKATWSEEKQTWLLNGVKRFITNGDGDVSLVLAR 222 Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + L+ D G+ +R++NK+G + + T EL F+N L+GD + G Sbjct: 223 TEEGTTDARGLSMLVYDKRDGGVKVRRIENKMGIKGSPTCELVFTNAPAQLVGDRKM--G 280 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 ++ ++ +++A + + V L EA + YA R G +I + ++++ Sbjct: 281 LIK--YVMSLMNAARLGIGAQSVGLCEAAYREALKYAHEREQFGKPIIRFAAVSEMLSNM 338 Query: 363 ALDIAAATALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCC 405 + AL + + E + R E Y R+ P+ K + Sbjct: 339 KAKLQGVRALLYETTRFVEVYKQYGHIAHERSLEGEERQEMKFYNRLADGFTPLVKLFSS 398 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 + A +A++ GGSG++++ R YR++ +I G+ V+ +N + KGT Sbjct: 399 EYANQQAYDAIQIHGGSGFMKDYPCERLYRDARIMNIYEGTSQLQVVAAINSVTKGT-FM 457 Query: 466 EQL 468 EQ+ Sbjct: 458 EQI 460 >gi|115360517|ref|YP_777654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria AMMD] gi|115285845|gb|ABI91320.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD] Length = 596 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSHAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA R + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + GK Sbjct: 468 EIGDTVAALGK 478 >gi|168184488|ref|ZP_02619152.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum Bf] gi|237796281|ref|YP_002863833.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum Ba4 str. 657] gi|182672441|gb|EDT84402.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum Bf] gi|229260783|gb|ACQ51816.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum Ba4 str. 657] Length = 635 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + + + S G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A+ + + S EAA A K + + ++ +A++ GGS Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365 >gi|148545651|ref|YP_001265753.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148509709|gb|ABQ76569.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 592 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405 ++R + + I A S +A D AK RSEE ++ P+ K + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + GG GYI E + R+ I G+ LD++ Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454 >gi|167524819|ref|XP_001746745.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775015|gb|EDQ88641.1| predicted protein [Monosiga brevicollis MX1] Length = 630 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 43/302 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ K +DG Y ++G K F+S D I+LA+ E Sbjct: 188 LTEPQCGTDLGQMKTKAVKQADGSYKITGTKIFISCGEHDFTENIVHIVLARTENAPPGT 247 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L EDGS L L+ K+G ++T + F ++ G+L+G+ N Sbjct: 248 KGISLFIVPKYLQKEDGSLETKKNLVCGGLEKKMGIHGSSTCVMNFEDSKGWLIGEENKG 307 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + +A+ + ++ A+ Y + R +G +I Sbjct: 308 LFQMFTFMNTARIGTALQGLGAAELAYQGALPYTKERMSMRALSGTREPEKAGDAIIHHG 367 Query: 354 VMKR------AIADIALDIAAATAL--SFRL-ANSFDEAKSRSEEAAYARIMAPITKYWC 404 ++R A A+ A + T++ + L A + +E K +E + + PI K + Sbjct: 368 DVRRMLLTCKAFAEGARSMMYETSMLADYMLTAKTPEEHKKVDDEMGF---LTPILKGFI 424 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 ++ ++ ++C GG GY+++ + ++ R++ ++ G+ LD+L LL+ G Sbjct: 425 TEIGVEAASQGLQCFGGHGYLQDWGMEQNMRDARIGTLYEGTTGIQALDLLGRKILLQGG 484 Query: 462 TN 463 N Sbjct: 485 KN 486 >gi|294651674|ref|ZP_06728977.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292822453|gb|EFF81353.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 607 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +++ M +M T + PK+ + T + LTE + GT Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G +++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + +LA+ +A ++AAY PI K + ++ Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI E + + R++ +++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIG 456 >gi|227500885|ref|ZP_03930934.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] gi|227216989|gb|EEI82374.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] Length = 642 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K G GLTE+ G+D + + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGD-YYILNGKKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F N + N+ Sbjct: 172 TTPGIGTHGISAFIVEKGFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + + + A+ Y + R G + +AD+ Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYGKEREQFGLPIAHLQANTFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ AA + + A + + S EAA A K + +A + EA++ GGS Sbjct: 289 ATNLHAARLMIYTAAELKENHERYSAEAAMA-------KQFASDLAMKITTEAIQIYGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G+I+ + R +R++ I G+ M Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369 >gi|226953831|ref|ZP_03824295.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226835422|gb|EEH67805.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 607 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 52/344 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +++ M +M T + PK+ + T + LTE + GT Sbjct: 126 MYPGLSTGCMNTIMQFGTDEQKNTYMPKLVEGTWSGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGQVKTKAEPAADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G +++AT L F N G+L+G++N + Sbjct: 233 PKFIPTADGGVGERNTVSCGSIEHKMGIKASATAVLNFDNATGYLIGEINKGLHAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIA 360 + +A+ ++ +S A+ YA+ R V+ I+ V + + Sbjct: 293 NTARIGTAVQGIAHAELSFQGALPYAKDRMSMRALSGKKEPERVADAIIHHADVRRMLLT 352 Query: 361 DIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 A+ + + +LA+ +A ++AAY PI K + ++ Sbjct: 353 QKAVAEGGRAMIYHAAKLADKMTDALVNGDQAAYEAYDDKLGFYTPILKGFLTELGLEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 M+ GG GYI E + + R++ +++ G+ LD++ Sbjct: 413 NHGMQVYGGHGYIREWGMEQIARDARISTLYEGTTGIQALDLIG 456 >gi|183981098|ref|YP_001849389.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M] gi|183174424|gb|ACC39534.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium marinum M] Length = 390 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 56/315 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ A M + LTE G+D +A++++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRL----------ATMDAIASYC---LTEPGAGSDASALSARA 139 Query: 219 --QKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272 Q + G Y L G K F+S + SD ++++A+ EG G + ++E G+P GL + Sbjct: 140 VRQGSAPGSDYVLDGVKQFISGAGASDVYVVMARTGAEGPRG--ISAFIVEKGTP-GLSF 196 Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315 L+ K+G + T ++ FG + LN Sbjct: 197 GALEEKMGWHAQPTAQVVLEGVRVPADAMLGGVDGTGAGFGIAMNGLNGGR--------- 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ G + + A+A Y R R G L+D+P ++ +AD+A + A+ L +R Sbjct: 248 --LNIAACSLGGAQSAFAKAGAYVRERQAFGASLLDEPTVRFTLADMATGLEASRMLLWR 305 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 AN+ DE + E + + K + V +A++ GG GY+ E + + R Sbjct: 306 AANALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQLHGGYGYLREYGLEKIVR 359 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 360 DLRVHRILEGTNEIM 374 >gi|320326438|gb|EFW82491.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331590|gb|EFW87528.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 592 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|255530749|ref|YP_003091121.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343733|gb|ACU03059.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM 2366] Length = 390 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 29/289 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFL 235 F+ E P T+ IG GLTE G+D A+ +SDG Y ++G K W Sbjct: 111 FANEQQKQKWLPKLATAEWIGAWGLTEANTGSD--ALRMMTTAVSDGDEYVINGAKNWIT 168 Query: 236 SSPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D A +M+ E + ++E G+P G + +NK+G R++ T E+ F N Sbjct: 169 HGKTGDVAVVMVRTGEKGDSKGISAIVVERGTP-GFSAGKKENKLGMRASETTEMIFDNC 227 Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG V G + MK+ LD +S++ + + +A+ A+ YA+ RH G Sbjct: 228 RVPAANLLG--KVGEGFKQAMKV---LDGGRISIAALSLGIAKGAYEAAVAYAKERHQFG 282 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + + +AD+A +I AA L + A+ + ++E+A A KY+ + Sbjct: 283 QPIASFQGISFKLADMATEIEAAELLIRQAADLKNRGLQMTKESAMA-------KYFASE 335 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +A EA++ GG GY ++ + + YR+S +I G G + + ++ Sbjct: 336 VAVRCATEAVQIFGGYGYTKDFPVEKFYRDSKLCTI--GEGTSEIQKIV 382 >gi|40063116|gb|AAR37963.1| acyl-CoA dehydrogenase family protein [uncultured marine bacterium 561] Length = 601 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 51/341 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P++ + E+ T + L+E + G+ +A + ++ DG Y + G+K Sbjct: 149 WVPRLRTGEFAGT-------------MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKI 195 Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277 ++S +S + +LA++EG + F+ P+ L EDGS N + L + Sbjct: 196 WISGGDHELSSNIVHAVLARIEGAPPGVKGISMFICPKFLLNEDGSVGERNDVQLAGLFH 255 Query: 278 KIGNRSNATVELEFSNTFG---FLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 K+G R + L F G +L+G+ L + + ++++ A ++++G + Sbjct: 256 KMGGRGQTSTALNFGEGEGAVAYLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQY 315 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA-------ATALSFRLANSFDEA 383 SL A + R S + PVM AD+ + A A +L + D+ Sbjct: 316 SLDYAKERPQGRKASSKDPLADPVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDW 375 Query: 384 KSRSEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 K+ +E + PI K W + P A++ +GG+GY E + YR++ Sbjct: 376 KTHPDEVGRTGAFELLDFLTPIVKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDN 435 Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476 N I G+ LD+L + + G ++ S +E L Sbjct: 436 RLNPIHEGTTGIQSLDLLGRKVPQNGLAGYQACLSAIESTL 476 >gi|187927093|ref|YP_001893438.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|241665422|ref|YP_002983781.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] gi|187728847|gb|ACD30011.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|240867449|gb|ACS65109.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 380 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 44/272 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + SDG Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTATRSSDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKG 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 + D S G + K+G ++ T EL F N F +L+ +L Sbjct: 184 TSLFVVDTSMEGFSKGKRLKKVGMKAQDTAELFFDNVRVPAANLLGEEHRGFAYLMQEL- 242 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E ++I I AI S G +L + Y R R G ++D + A+A++ Sbjct: 243 ----PWERLQIAI---GAIASAEG---ALEWTLRYVRERQAFGKSILDFQTARHALAELK 292 Query: 364 LDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 ++ ++ +LA D A A + KYW + V+ ++ Sbjct: 293 TEVQIGRVFVDQCIALKLAGKLDAA------------TASMAKYWTTDLQFKVMDRCVQL 340 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR + +S I G+ M Sbjct: 341 HGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 372 >gi|329895299|ref|ZP_08270941.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] gi|328922421|gb|EGG29764.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] Length = 589 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 100/396 (25%), Positives = 177/396 (44%), Gaps = 60/396 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++P ++S + +A+ T +A KI S E+ T + LTE G+ Sbjct: 128 LAPFLSSGAALAITAHGTQEQKALYATKINSGEWSGT-------------MNLTESGAGS 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+ + ++ D Y + G K +++ +A ++LA++ EG G F+V Sbjct: 175 DLGPLKTRAVPEGDH-YRIYGQKIYITWGDHEATDNIVHLVLARLPDAPEGSKGISLFIV 233 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G ++ T + + +T G+L+G N + Sbjct: 234 PKYLVNEDGSLGARNDVYPVSVEHKLGIHASPTCVMAYGDTEGAIGYLVGRENEGLRCMF 293 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M L + + + A YAR R G +I+ P +KR + + A Sbjct: 294 TMMNEARLKVGLQGLGAAEGAFQLAKAYARERVQGGVAIIEHPDVKRMLLTMRSGCEAMR 353 Query: 371 ALSFRLANSFDEAKS--RSEEA-AYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AL++ A + D A S SE+A A ARI M P+ K W + + ++ GG GY+ Sbjct: 354 ALAYSEAVTMDLAHSGPESEKALAQARIDLMIPVIKGWLTTFGEEITSLGVQVHGGMGYV 413 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVIT 485 EE A+++R+ SI G+ D++N L +D G++ + V T Sbjct: 414 EETGAAQYFRDVRITSIYEGTNGIQAADLVN-------------RKLGRDGGATMELVQT 460 Query: 486 ILRDSIS-LCKED----KGLARFLTEKIALASSAAA 516 + ++++ L D KG+ + L K+ALA+ A Sbjct: 461 EIAETVADLMASDNDVLKGMGQAL--KVALAAQVRA 494 >gi|239994396|ref|ZP_04714920.1| probable acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 586 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 50/339 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD++ ++++ + DG Y ++G+K F+++ D ++LA+ Sbjct: 162 MNLTEPHAGTDLSLLSTKAEPQGDGSYKVTGNKIFITAGDHDWSSNVIHLVLARLPDAPK 221 Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+ L D G N L +++K+G +++ T + F G+L+G+ Sbjct: 222 GVKG-ISLFLVPKFLPDASNEPGEANSLSVGSIEHKMGIKASPTCVMNFDGATGYLVGEE 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350 N + M + + S A+ YAR R S GI ++ Sbjct: 281 NQGLACMFTMMNDARFQVGLQGLGAAEASYQGALTYARERVQSRAPQGIQNPEGKADPIV 340 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCC 405 QP + R + I ALS A D E + + + + + PI K + Sbjct: 341 FQPDVARMLLTQKSLIEGCRALSLFYAKFMDVEKLGEGQEKEDADKILQFLTPICKAFMT 400 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 M + ++ GG G+I E + + R+ + G+ LD++ L G Sbjct: 401 DMGLETTSLGVQVFGGHGFIREWGMEQLMRDVRIAMLYEGTNGIQALDLIGRKLTRDGGQ 460 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 + E ++ +++ ++DS E KGLA+ Sbjct: 461 MMEATYNAF--------NALVSDIQDS-----EAKGLAQ 486 >gi|115379922|ref|ZP_01466980.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella aurantiaca DW4/3-1] gi|115363073|gb|EAU62250.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 39/262 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ + + D + L+G K W S + ++ A+ G L Sbjct: 75 LSEAHAGSDPGALRTTAVRQGD-QWVLNGSKQWITSGAYAGVMVVWARTSGTGNKGLSAF 133 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKI- 314 ++E G+ GL + ++K+G R + TV L F D ++ + E K+ Sbjct: 134 IVEGGT-KGLHVGKHEDKMGLRGSNTVSLTFE--------DCHIPADQILGKEGEGFKLA 184 Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364 ++ LD + ++ R +L A+ Y + RH +QPV + +AD+ + Sbjct: 185 MVALDGGRIGIASQACGVARAALEAAVRYTKDRHA-----FNQPVSEFQGPRFMMADMKV 239 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 IAAA L+FR A ++ + + EA+ A++ A +MA V +A++ GG GY Sbjct: 240 QIAAAELLTFRAATLKEKGQPFTREASMAKLFAS-------EMANRVCDKAVQLHGGYGY 292 Query: 425 IEERSIARHYRESPANSILLGS 446 I+E + R+YR++ +I G+ Sbjct: 293 IDEFPVERYYRDARVQTIYEGT 314 >gi|152983819|ref|YP_001346002.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150958977|gb|ABR81002.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 598 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 50/345 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ +DG + +SG K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHSISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L D G+ N + +++K+G +++AT + F G+L+G+ N Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354 + M L + + + S A+ YAR R +SG D+P Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLSGPKAPDKPADPIIVHP 343 Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + AL++ A D +A R A + PI K + + Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 V M+ GG GYI E + + R+ I G+ LD+L Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLG----------- 452 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + LGS GK + + LC+ G + + LA+ Sbjct: 453 -----RKVLGSQGKLLRGFTKLVHQLCQAQAGHPQLKGQVAQLAA 492 >gi|28211065|ref|NP_782009.1| acyl-CoA dehydrogenase [Clostridium tetani E88] gi|28203504|gb|AAO35946.1| acyl-coA dehydrogenase [Clostridium tetani E88] Length = 635 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + G Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGGHYILNGSKIFITNAGKADIYIIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNIGTRGISAFIVEKGWEGFSFGQHYDKLGIRSSATGELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q V+ +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYSKERIQFGKPICQQQVIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A + + S E+A A K + + ++ +A++ GG+ Sbjct: 289 ATKLRAARLLIYSAAELKENNEPYSMESAMA-------KQYASDVCLEIVNDALQIFGGN 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|26987112|ref|NP_742537.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24981741|gb|AAN66001.1|AE016229_2 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440] Length = 592 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 38/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L EDGS N +++K+G +++AT + F G+++G+ N Sbjct: 226 KGISLFLVPKFLVNEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK--------SRSEEAAYARIMAPITKYWCC 405 ++R + + I A S +A D AK RSEE ++ P+ K + Sbjct: 346 DVRRMLLTMKALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEE--LVALLTPVAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + GG GYI E + R+ I G+ LD++ Sbjct: 404 DLGLECAVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMG 454 >gi|84687656|ref|ZP_01015530.1| FadE25_4 [Maritimibacter alkaliphilus HTCC2654] gi|84664333|gb|EAQ10823.1| FadE25_4 [Rhodobacterales bacterium HTCC2654] Length = 385 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--AQVEGR----V 253 +GLTE + G+D++ I + ++ D Y ++G K F++ +I+L EG+ + Sbjct: 125 IGLTEPQTGSDVSGIKTTAKRDGDD-YVINGQKVFITKADQAKYILLFARTSEGKGHDGI 183 Query: 254 GCFLVPR----LLEDGSPNGLCYQRLKNKIGNRSNATVELE---------FSNTFGFLLG 300 F+VP + GSP + + +KN N V E F N G L Sbjct: 184 SSFIVPMDSPGVKIGGSPKKMGLRGIKNCDLFFENVRVPAENLVGEEGQGFKNAMGVL-- 241 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 +LN T SV + +L A+ YA+ R G + + +++ +A Sbjct: 242 NLNRPT-------------VGAASVGIAQGALDAAMAYAKEREQFGQPIGNFQLVQAMLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ I AA AL +++A D + + Y+ ++ K + MA V +A++ G Sbjct: 289 DMAIQIEAARALLYKVAAFIDRDPTHPQVPMYSSMI----KTFASDMAMKVTTDAVQVFG 344 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G+GY+++ + R+ R++ I G+ L + + KG Sbjct: 345 GAGYLQDHPVERYMRDAKVCQIYEGTNQIQRLIIARAMLKG 385 >gi|18309079|ref|NP_561013.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13] gi|168207714|ref|ZP_02633719.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987] gi|168211542|ref|ZP_02637167.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|168215038|ref|ZP_02640663.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969] gi|168218168|ref|ZP_02643793.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239] gi|182625955|ref|ZP_02953719.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721] gi|18143754|dbj|BAB79803.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13] gi|170660951|gb|EDT13634.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987] gi|170710483|gb|EDT22665.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|170713535|gb|EDT25717.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969] gi|177908762|gb|EDT71269.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721] gi|182379811|gb|EDT77290.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239] Length = 378 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + +K D Y L+G K F++ +P+S FI+ A + G + Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGPKGL 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G+ ++++K G +S E+ F++ ++ N+ + KI + Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEGDGFKIAMKT 237 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AE A Y + R G L Q + +A++A++I A + Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E K S AA A+++ C A V EA++ +GG+GY+ E + R Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 351 MMRDAKITQIYEGT 364 >gi|119504010|ref|ZP_01626091.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119460013|gb|EAW41107.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 601 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 51/341 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P++ + E+ T + L+E + G+ +A + ++ DG Y + G+K Sbjct: 149 WVPRLRTGEFAGT-------------MALSEPQAGSSLADMRTKAVAQDDGTYRIFGNKI 195 Query: 234 FLSS---PMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277 ++S +S + +LA++EG + F+ P+ L EDGS N + L + Sbjct: 196 WISGGDHELSSNIVHAVLARIEGAPPGVKGISMFICPKFLLNEDGSVGARNDVQLAGLFH 255 Query: 278 KIGNRSNATVELEFSNTFG---FLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 K+G R + L F G +L+G+ L + + ++++ A ++++G + Sbjct: 256 KMGGRGQTSTALNFGEGEGAVAYLVGEPHQGLRYMFHMMNEARVMVGTSGATLAMAGYQY 315 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA-------ATALSFRLANSFDEA 383 SL A + R S + PVM AD+ + A A +L + D+ Sbjct: 316 SLDYAKERPQGRKASSKDPLADPVMLIEHADVRRMLLAQKAYAEGAWSLCLFASQLVDDW 375 Query: 384 KSRSEEAAYA------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 K+ +E + PI K W + P A++ +GG+GY E + YR++ Sbjct: 376 KTHPDEVGRTGAFELLDFLTPIVKTWPSEYGPKANDFAIQVLGGAGYTNEHPVELMYRDN 435 Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476 N I G+ LD+L + + G ++ S +E L Sbjct: 436 RLNPIHEGTTGIQSLDLLGRKVPQNGLAGYQACLSAIESTL 476 >gi|330815914|ref|YP_004359619.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3] gi|327368307|gb|AEA59663.1| Acyl-CoA dehydrogenase-like protein [Burkholderia gladioli BSR3] Length = 596 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKTRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML------AQVEGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L + EG G F+V Sbjct: 171 DLALVRSRAEPQGDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPSAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVKEDGSLGERNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D+A + + A AR + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDQAHAHPDAAERARHQAIYEYLVPVVKGWSTEMVNEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|163800396|ref|ZP_02194297.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4] gi|159175839|gb|EDP60633.1| putative acyl-CoA dehydrogenase [Vibrio sp. AND4] Length = 384 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T V + PK+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFATDEVKDAFCPKLITGEF----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y L+G K F+S + +D +++A+ G G V + +G+ Y R + Sbjct: 140 ATRQGDN-YILNGGKTFISGAGETDVLVVMART-GDAGAKGVSAFVVPADADGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G V MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFDNVSIAASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R+ G L ++ +AD+A ++ AA L A+ D Sbjct: 256 LNQAAQYMQERNQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V +A++ GG GYI+E + RH+R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPLERHFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|110798756|ref|YP_694556.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124] gi|110673403|gb|ABG82390.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124] Length = 378 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + +K D Y L+G K F++ +P+S FI+ A + G + Sbjct: 122 FGLTEPNAGSDAGGVITVAEKKGDN-YILNGAKCFITNAPLSGTFIVFALTDRTKGPKGL 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G+ ++++K G +S E+ F++ ++ N+ + KI + Sbjct: 181 SAFIVEKDFPGISIGKIEDKCGIKSAQVSEVLFNDC---VVPASNLVGKEDDGFKIAMKT 237 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AE A Y + R G L Q + +A++A++I A + Sbjct: 238 LDGGRIGVAAQGLGIAEGAFEIAKEYMKERKQFGKPLFKQQYLAFKMAELAVEIEQAKYM 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E K S AA A+++ C A V EA++ +GG+GY+ E + R Sbjct: 298 LYKAAMDKQEGKPYSVSAAKAKLV-------CTDAAMHVTTEAIQMLGGNGYMREYQLER 350 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 351 MMRDAKITQIYEGT 364 >gi|90075722|dbj|BAE87541.1| unnamed protein product [Macaca fascicularis] Length = 371 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 38/264 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ K D Y L+G K W S+ + F+++A V+ +G + Sbjct: 115 LSEAGAGSDSFALKTRADKEGD-YYVLNGSKMWVSSAEYAGLFLVMANVDPTIGYKGITT 173 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-- 318 + D GL + +NK+G R+++T L F N V + KIL + Sbjct: 174 FIVDRDTPGLHIGKPENKLGLRASSTCPLTFENV-------------KVPEAKILGQVGH 220 Query: 319 --DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 AI S++ R+ +A I Y + R G L D ++ +A +A Sbjct: 221 GYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQGLQHQVAHMAT 280 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L++ A + K +EA+ A KY+ ++A ++ +E +GG GY Sbjct: 281 QLEAARLLTYNAARLLEAGKPFIKEASMA-------KYYASEIAGQTTSKCIEWMGGVGY 333 Query: 425 IEERSIARHYRESPANSILLGSGN 448 ++ + +++R++ +I G+ N Sbjct: 334 TKDYPVEKYFRDAKIGTIYEGASN 357 >gi|288554425|ref|YP_003426360.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288545585|gb|ADC49468.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 380 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 33/288 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S EY +G GLTE G+D ++ + +K + Sbjct: 103 TEEQKQKYVPKLASGEY--------------LGAFGLTEPGAGSDAGSLKTTAKKEGND- 147 Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+++ +D +I+ A + ++G + + D G + + K+G + Sbjct: 148 YILNGSKVFITNGGEADVYIVFASTDSQLGTKGISAFIVDKDTPGFSVGKKEKKMGLHGS 207 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHY 338 T EL F + + + N+ E KI + LD+ + ++ + +AE A+ Y Sbjct: 208 NTTELTFEDA---RVPEENLLGQEGEGFKIAMSNLDAGRIGIAAQSLGIAEAALEAAVGY 264 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A+ R G + Q + +AD+A + + L +R A + K EA+ A++ Sbjct: 265 AKERKQFGKPIGHQQGLGFKLADMATKVEGSKLLVYRAAKLRELGKKSGMEASMAKL--- 321 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V EA++ GG GY ++ + R++R++ I G+ Sbjct: 322 ----FASRTAVEVSIEAVQVYGGYGYTKDYPVERYFRDAKICEIYEGT 365 >gi|294146601|ref|YP_003559267.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S] gi|292677018|dbj|BAI98535.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S] Length = 577 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 41/343 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + LTE GTD+A + ++ +DG Y ++G K F+SS D + Sbjct: 151 PMVSGEWTGAMALTESGAGTDLALLKTKAAPDADGSYAITGQKIFISSGDHDFGGNIVHL 210 Query: 245 MLAQ-------VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + FLVP+ L D N + L+ K+G + T + + Sbjct: 211 VLARLPDAPAGVKG-ISLFLVPKYLPDADGGFTIRNSMSVGALEKKMGIHAQPTCVMNYD 269 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR------- 342 G+L+G+ + + M ++ + ++ + G+ + S +A YA+ R Sbjct: 270 GATGWLVGEPHKG---LAAMFTMMNAERLMVGIQGLGIAGASYQQAAGYAKERLQGRSAD 326 Query: 343 HVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARI 395 G + +I+ ++R + +I + A AL+ A D A R+ A + Sbjct: 327 GARGPVTIIEHADVRRMLLNIRAFVEAGRALAGWTALQLDRAHHHPDAAERARADALVAL 386 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K +A + GG GYI E + ++ R++ I G+ +D++ Sbjct: 387 LTPVVKAAFTDFGFESAVQAQQVFGGHGYIREWGMEQYVRDARIAQIYEGTNGVQAMDLV 446 Query: 456 N--LLEKGTNLFEQLFSTLEQDLGSS-GKKVITILRDSISLCK 495 L G + E F+ +E DL ++ G + R++++L + Sbjct: 447 GRKLPMAGGAVVEGFFALVEMDLAAAEGLNIAAKTREALALLR 489 >gi|289624775|ref|ZP_06457729.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 592 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDGATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|126459920|ref|YP_001056198.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249641|gb|ABO08732.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 407 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 18/292 (6%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SP 238 ++Y P P+ + L LTE G+DI +++ +K D Y L G K F++ +P Sbjct: 120 KKQYIP----PVARGEKTFFLALTEPDHGSDITQLSTVAKKEGD-YYVLKGIKTFITNAP 174 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 ++ ++LAQ E G L G+ + LK K+G R++ E+ G Sbjct: 175 TAEYGLILAQTEPEKGYRGQTLFLIHTDWPGVDVKPLKGKMGQRASPLGEIRLD---GVK 231 Query: 299 LGDLNVSTGPVEDMK----ILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349 + V GP K L YL+ + V M + A +A++R G + Sbjct: 232 VPKEYVVGGPEGLNKGFYWALQYLNIGRVHVGAVALGMMLAAFDRAYDFAQKRVQFGRPI 291 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 I+ ++++ +A++A I + +R DE + E ++ ITK + + A Sbjct: 292 IEFQLIQQKLAEMAQLIDISRLAVYRAHLILDEYIKGAVEPRTMAAISSITKVFVTENAT 351 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 VI A++ +GGSGY+EE + R +R+ I G+ L +++ L +G Sbjct: 352 KVIDHAIQILGGSGYMEEYDVERIWRDHRVTRIYEGTTEINTLTIVDSLRRG 403 >gi|119385946|ref|YP_917001.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119376541|gb|ABL71305.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 584 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/333 (20%), Positives = 142/333 (42%), Gaps = 51/333 (15%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A +A + + + + P++ S E+ + LTE GTD+ +TS+ Sbjct: 134 AAEALASHASDELRRTYLPRLISSEWSGV-------------MALTEASAGTDLGLLTSR 180 Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED- 264 + + DG + ++G K F+SS D ++LA+ V+G + FLVP+ L + Sbjct: 181 AEPVGDGSFRITGTKIFISSGDHDFGGNVIHLVLARLPDAPKGVKG-ISLFLVPKFLVNP 239 Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 G N + L++K+G + T + + G+L+G+ + M ++ + Sbjct: 240 DGTLGERNAMAVGSLEHKMGIHAQPTCVMNYDGAIGWLVGEEGRG---LNAMFTMMNAER 296 Query: 321 AIMSVSGMRVSL---AEAIHYARRRHVSGGI--------LIDQPVMK------RAIADIA 363 + + G+ +S +AI YA R + +I+ P ++ R++ D + Sbjct: 297 LFVGIQGLGISEIANQKAIAYAHDRKQGRSLDGTRSPVPIIEHPDVRKLLLTGRSLTDAS 356 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +A TA+ +A +A+ R++ ++ P+ K + + +GG G Sbjct: 357 RGLAVWTAMQMDIAARHPDAQVRADAGDLVALLTPVIKAAFTDFGFETAVASQQVLGGHG 416 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 YI E + + R+ I G+ +D++ Sbjct: 417 YIREWGMEQFVRDVRIAQIYEGTNGVQAMDLVT 449 >gi|124266491|ref|YP_001020495.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium petroleiphilum PM1] gi|124259266|gb|ABM94260.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Methylibium petroleiphilum PM1] Length = 596 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/403 (23%), Positives = 183/403 (45%), Gaps = 69/403 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T + AL+T + + + PK+ S ++ T + LTE + G+ Sbjct: 124 LCPLLTDGCIEALLTAGSEAQQQTYIPKMISGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + DG + L G K F++ D ++LA+V G + F+V Sbjct: 171 DLALVRTRAEPQPDGSFKLFGTKIFITYGEHDMAENIVHLVLARVSGAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L DGS N + +++K+G +++ T L++ + G+L+G N +E Sbjct: 231 PKFLVKADGSLGERNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGQENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI-----LIDQPVMKRA 358 M I++ + V G+ V+ +A+ YA+ R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGVQGIAVAERAYQKAVAYAKDRVQSRPVDGSVRGSAPIIHHPDVRRM 347 Query: 359 IADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + +A A ++ A++ +A+ R++ A+ M P+ K + +M+ V Sbjct: 348 LMTMRSHTEGCRAMAIVAAAAYDAAHAHPDAEVRAQNEAFYEFMVPLVKGYSTEMSVEVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 + ++ GG GYIEE A++YR++ +I G+ + +L+ + T Sbjct: 408 SLGVQVHGGMGYIEETGAAQYYRDAKILTIYEGT---TAIQANDLVGRKT---------- 454 Query: 473 EQDLGSSGKKVIT-ILRDSISLCKEDKGLARFLTEKIALASSA 514 +D G + K + I R L D AR + +++ A +A Sbjct: 455 ARDGGGTAKAIAAQIARTEAELAARDSVAARAVLKRLTAARTA 497 >gi|326568038|gb|EGE18128.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC7] Length = 606 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 58/347 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ S+ ++ + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L E N + +++K+G S+AT + F GFL+G+ N + Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355 + + I ++ + +S ++ YA+ R +SG +QP + Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409 ++A A+ A + TA R A+ EA ++ +E A + + PI K + ++ Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGVFTPILKGFLTELGI 409 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI+E + R++ ++ G+ LD+L Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456 >gi|146309095|ref|YP_001189560.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145577296|gb|ABP86828.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 601 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V I YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYA-----RIMAPITKYWCCKM 407 ++R + + A+ + A D K S++EE A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQNEEEKKAADELLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + M+ GG G+I E + ++ R+ + + G+ LD+L Sbjct: 405 GFEAASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGTTGVQALDLLG 453 >gi|94309684|ref|YP_582894.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93353536|gb|ABF07625.1| Acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 594 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+AA+ ++ + DG + + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLAAVRTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLLNADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I ++SA SV ++++E A+ +A+ R S + +I P +K Sbjct: 288 YM--FIMMNSARFSVGMQGIAVSERAYQQAVAFAKERVQSRPVDGSAREAVTIIHHPDVK 345 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPA 410 R + + I A ++++ A + D A +E + MA P+ K W +++ Sbjct: 346 RMLMTMRALIEGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTELSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+HYR++ Sbjct: 406 VTSLGVQVHGGMGFIEETGAAQHYRDA 432 >gi|209547822|ref|YP_002279739.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533578|gb|ACI53513.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 598 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 37/344 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKTSVAIGLGLTEKR 206 H TSA+ ++LM P + + I S E T M + + LTE Sbjct: 110 HTAVGEYTSAANMSLMMYPGLTQGAIAAILVHGSTEQKATYLPKMVDGAWTGTMNLTEPH 169 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGC 255 GTD+ + ++ +DG Y ++G K F+S+ D ++LA++EG + Sbjct: 170 CGTDLGMLRTKAVPQADGSYKIAGQKIFISAGEHDLADNIVHLVLARIEGAPEGTKGISL 229 Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ L G+ N + +++K+G +NAT + + GFL+G N + Sbjct: 230 FIVPKFLVGKDGALGARNAVTCGAIEHKMGIHANATCVMNYDEATGFLIGAENRGLNAMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRA 358 M L + ++ ++ A +YAR R +SG +I P ++R Sbjct: 290 VMMNEARLMVGLQGIAISEIAYQNAANYARDRIQGRSLSGPKAPDKKADPIIVHPDIRRT 349 Query: 359 IADI-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + I A + A TAL +A+ + K R ++ PI K Sbjct: 350 LMTIRAFNEAGRAFLLWTALKSDIAHRATDDKERQTADDILGLVTPILKGVMTDKGFDHA 409 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + GG GYIEE ++++ R++ I G+ LD++ Sbjct: 410 VMAQQVFGGHGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVG 453 >gi|327482516|gb|AEA85826.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 600 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 65/336 (19%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S P+S+ + Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 N G+L+G+ + + M +I + + + ++ +G SL +YAR R Sbjct: 271 DNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSL----NYARER--P 324 Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P++ ++A + A D+ +A RL + DE + Sbjct: 325 QGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSA---RLVD--DEHTAE 379 Query: 387 SEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 SEEA + ++ PI K W + A++ +GG GY E + ++YR++ N Sbjct: 380 SEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNP 439 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 I G+ LD+L G L + + L Q LG Sbjct: 440 IHEGTHGIQSLDLL-----GRKLMQNKGAGLRQLLG 470 >gi|311695370|gb|ADP98243.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15] Length = 623 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ + +DG Y ++G K F+S+ D I+LA++ G Sbjct: 189 LTEPHCGSDLGTLRTKAEPNADGTYAITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 248 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L EDGS N + +++K+G NAT + F G+L+G N Sbjct: 249 KGISLFIVPKCLPNEDGSAGERNAVSCGSIEHKMGIHGNATCVMNFDGAKGWLIGPENKG 308 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353 + + +AI + + ++ YA+ R +SG GI +I P Sbjct: 309 LNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKERLAMRSLSGPKNPEGIADPIIVHP 368 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYAR-----IMAPITKYWCCKM 407 ++R + A AL + A D S ++EE A + PI K + ++ Sbjct: 369 DVRRMLLTQKAVAEGARALIYLTAQQADVVHSGKTEEERKAADEALGFLTPIAKAFLTEI 428 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 M+ GG G+I E + ++ R++ I G+ LD+L L+ +G +L Sbjct: 429 GYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 488 >gi|308049643|ref|YP_003913209.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] gi|307631833|gb|ADN76135.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] Length = 586 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 30/311 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254 +TE + G+D+ I ++ DG Y +SG K F++ D ++LA++ G Sbjct: 165 MTEPQAGSDLRHIRTKAVPQEDGSYRVSGTKIFITGGDHDLTENVIHLVLAKLPDAPGGS 224 Query: 255 ----CFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 FLVP+ + +DGS PNG+ +++K+G +++AT + F++ G+L+G +N Sbjct: 225 RGLSLFLVPKFEVADDGSVGGPNGVECGSVEHKMGIKASATCVINFNDAKGYLVGQVNRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVM 355 + M L I + A YA R G +I + Sbjct: 285 LAAMFTMMNYERLSIGIQGLGCAEAGYQMARDYALERKQGQGSGQGLGNGADPIIVHGDV 344 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YARIMAPITKYWCCKMAPAVIA 413 +R + IA A AL+ S D+ K + A ++ P+ K + Sbjct: 345 RRMLMQIAAMTEAGRALAVLTGQSLDKQKHLKDAQADDLVGLLVPLAKAFFTDTGLESSV 404 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFST 471 A + GG GY+ E + + R+ I G+ LD+L +L + + + L + Sbjct: 405 AAQQVFGGHGYVRETGVEQLVRDVRIAQIYEGTNGIQALDLLGRKVLPRDAAMLKTLIAM 464 Query: 472 LEQDLGSSGKK 482 +E DL +G + Sbjct: 465 VEADLAETGAE 475 >gi|158424598|ref|YP_001525890.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158331487|dbj|BAF88972.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 596 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 50/297 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249 LTE GTD+ + ++ + +DG Y ++G K F+S+ D ++LA+ + Sbjct: 164 LTEPHCGTDLGLLRTKAEPQADGSYKITGSKIFISAGEHDLTENIIHLVLARLPDAPKGI 223 Query: 250 EGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ L EDG P NG+ +++K+G +AT ++ F G+L+G Sbjct: 224 KG-ISLFLVPKFLPTEDGRPGPRNGVTCTGIEHKMGLNGSATCQMSFDEATGWLVGT--- 279 Query: 305 STGPVEDM-KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL--------- 349 P + M + ++S +SV + + E A+ YAR R V G L Sbjct: 280 ---PHKGMAAMFTMMNSERLSVGTQGLGIGEASYQSAVAYARDR-VQGRALSGAKYPEKA 335 Query: 350 ----IDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPI 399 I P ++R++ + ALS +A + D + + R + + +M PI Sbjct: 336 ADPIIVHPDVRRSLMTMRAYNEGCRALSGWVARNLDLMERSNDPEERQQAEDFTALMTPI 395 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + ++ GG GYI + + ++ R++ I G+ LD++ Sbjct: 396 VKALFTDLGFTNASLGVQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGIQALDLVG 452 >gi|307185584|gb|EFN71538.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial [Camponotus floridanus] Length = 353 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 22/206 (10%) Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLK-----NKIGNRSNATVELEFSNTFGFLLGDLNVST 306 ++GCF + +GS G K +K+G R ++T L F + + NV + Sbjct: 141 KIGCFALSEP-GNGSDAGAASTTAKASKKEDKLGIRGSSTCSLIFEDC---QVPRDNVLS 196 Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 P KI ++ LDS + ++G + +A+A I YA +R G +I +++ IA Sbjct: 197 EPGMGFKIAMMTLDSGRIGIAGQALGIAQASLDCAIDYAAKRQAFGQSIIKLQTIQQKIA 256 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+AL + ++ L++R A D KS ++EAA A++ A T +C + ++ +G Sbjct: 257 DMALRLESSRLLTWRAAQLKDNDKSYTKEAAMAKLSASETATFCAH-------QCIQILG 309 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ + RHYR++ I G+ Sbjct: 310 GMGYVSDMPAERHYRDARITEIYEGT 335 >gi|229033974|ref|ZP_04188927.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] gi|229176017|ref|ZP_04303512.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] gi|228607449|gb|EEK64776.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] gi|228728349|gb|EEL79372.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] Length = 379 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGTKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|227438951|gb|ACP31205.1| isovaleryl-CoA dehydrogenase [Bacillus pumilus] Length = 161 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 7/154 (4%) Query: 13 NQVHQPSDSLFALNQPPLFIGMNAYSSDSLLVALIANFPSVVHKE-LELLGEYVLSCTAQ 71 + VH + ++F NQP N Y SD L + + + L +G+ + + + Sbjct: 5 DTVHWQTHTVF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESL 62 Query: 72 ELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQ 131 EL R+AN N P+L Y G R D V FHPAWH L++ + +H W+ R Sbjct: 63 ELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEED----ARSG 118 Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM 165 A RAAR L AQ+EAG L ++T A+ L+ Sbjct: 119 AFVARAARFMLHAQVEAGSLCPITMTFAATPLLL 152 >gi|291165783|gb|EFE27831.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896] Length = 643 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + + + D Y L+G+K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPEAGSDAGGTQTVAELVGDH-YILNGNKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPGIGVKGISAFIIEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + +I + LD + ++ + +A+ A++YA+ R G + Q + IAD+ Sbjct: 229 GQGFRIAMATLDGGRIGIASQALGIAQGAYEHALNYAKERVQFGKPIAFQQAISFKIADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A+ + + A + +S EAA A K + ++ +A++ GGS Sbjct: 289 ATKLRASRFMIYSAAELKEHHESYGMEAAMA-------KQYASDNCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|116049236|ref|YP_791961.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218892742|ref|YP_002441611.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254239657|ref|ZP_04932979.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192] gi|296390335|ref|ZP_06879810.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|115584457|gb|ABJ10472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|126193035|gb|EAZ57098.1| hypothetical protein PA2G_00278 [Pseudomonas aeruginosa 2192] gi|218772970|emb|CAW28782.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 606 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ + + LTE + GTD+ + ++ + DG Y +SG K F+SS Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202 Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D I+LA++ +G G F+VP+ L G NG+ L+ K+G ++ Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 +AT + F GFL+G N + + +AI V+ ++ A+ YAR R Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322 Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +SG DQ + ++AIA+ A L+ + A+ + Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +++A Y R + PI K ++ M+ GG GYI E + + R++ Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439 Query: 440 NSILLGSGNAMVLDVLN 456 ++ G+ LD+L Sbjct: 440 ATLYEGTTGIQALDLLG 456 >gi|229588007|ref|YP_002870126.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|229359873|emb|CAY46726.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] Length = 600 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 63/340 (18%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247 + LTE G+ ++ I ++ + +DG Y L G+K F+S P+S+ + + A Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L +DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352 G L+ + + +I + + + ++ +G SL YAR R G L D Sbjct: 281 GKPHQGLSCMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334 Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 PV ++A + A D+ A F + + R ++ Sbjct: 335 TTAPVSIIQHADIKRMLLTQKAYVEGAFDLGLYAARLFDDTTTLETDAERKHAHELLDLL 394 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454 Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 L Q+ G+ K++I ++ ++ + +E Sbjct: 455 -------------RKLAQNGGAGLKQLIRLMAETGAHAQE 481 >gi|221198533|ref|ZP_03571578.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2M] gi|221207762|ref|ZP_03580769.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2] gi|221172259|gb|EEE04699.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2] gi|221180984|gb|EEE13386.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans CGD2M] Length = 596 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 168/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDG+ N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNEDGTLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A +EA AR + PI K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHPDEATRARHQAVYEYLVPIVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVARALIA 467 Query: 471 TLEQDLGSSGK 481 + + + + GK Sbjct: 468 EIGETVAALGK 478 >gi|121534270|ref|ZP_01666094.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] gi|121307040|gb|EAX47958.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] Length = 379 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A + Q + +G Y ++G K F+++ ++ +++ A + G Sbjct: 123 FGLTEPNAGTDAA--SQQTTAVLNGDHYVINGSKMFITNAGEAEIYVIFAMTDKSKGVKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 + +LE G P G + + ++K+G RS+ T+EL F + + N+ E KI + Sbjct: 181 ISAFILEKGMP-GFTFGKKEHKMGIRSSQTMELIFQDV---KVPKENLLGKEGEGFKIAM 236 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + V+ + +A+A + YA+ R G + + +AD+A + AA Sbjct: 237 TTLDGGRIGVAAQALGIAQAALDYAVKYAKERVQFGKPIAANQAISFMLADMATKVDAAR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A + S+EAA A++ + +A AV +A++ GG GY E + Sbjct: 297 LLTYRAAYLKQQGLPYSKEAAMAKM-------YASDVAMAVTTDAVQIFGGYGYSREYPV 349 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 350 ERLMRDAKITQIYEGT 365 >gi|186472767|ref|YP_001860109.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184195099|gb|ACC73063.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 600 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 61/326 (18%) Query: 154 PSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 PS+T ++ AL+ + + + P++ S E+ T + LTE + G+D+ Sbjct: 126 PSLTDGAIEALLMAGSDAQKRRYLPRLVSGEWSGT-------------MNLTEPQAGSDL 172 Query: 212 AAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVP 259 + ++ ++ DG Y + G K F+S MS + L A V+G + FLVP Sbjct: 173 GLLRTRAERQHDGSYRVFGTKIFISWGEHEMSRNIVHLVLARTPDAPAGVKG-ISLFLVP 231 Query: 260 RLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 + L D G N + +++K+G + T L++ + G L+G+ N +E Sbjct: 232 KYLVDEDGHAGERNDVNCVSIEHKMGLTGSPTAVLQYGDRGGAIGELIGEENRG---LEY 288 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMKR 357 M +++ +A +V +++AE A YA+ R S + +I+ P ++R Sbjct: 289 MFVMMV--AARFAVGTQGIAIAERAYQKARSYAKERVQSRPVDGSAQQSVTIINHPDVRR 346 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAPITKYWCCKMAPAV 411 + + A+ AL++ A D A+ + A A M PI K W +M+ V Sbjct: 347 MLGTMRALTEASRALAYVAAAHSDHAQRHPDAQARAMHHGLYEFMVPIVKGWSTEMSVDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A+ YR++ Sbjct: 407 ASLGVQIHGGMGFIEETGAAQFYRDA 432 >gi|148556698|ref|YP_001264280.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148501888|gb|ABQ70142.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 596 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 46/295 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QV 249 LTE GTD+ + ++ DG + ++G+K F+S+ +S+ I L V Sbjct: 164 LTEPHCGTDLGMLRTKAVPQPDGSHRITGNKIFISAGDHDLSENIIHLVLARLPDAPPGV 223 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L EDGS NG+ +++K+G +++AT ++ F ++ G+L+G+ N Sbjct: 224 KG-ISLFVVPKYLPKEDGSVGPSNGVSCTGIEHKMGLKASATCQMSFDDSTGWLVGEPNS 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRR------------HVSGGIL 349 + M ++ + + V G+ V+ A A+ YA+ R ++ + Sbjct: 283 G---LNAMFTMMNTERVSVGVQGLGVATAAYQSAVAYAKDRIQGRALSGPKRPDLAADPI 339 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEAAYARIMAPITK 401 I P ++R + + LS +A + D E + R+E+ +M P+ K Sbjct: 340 IVHPDVRRMLMTMRAYTEGCRMLSIWVARALDAERHSPDAEVRQRAED--MTALMTPVVK 397 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + ++ GG GYI E + ++ R++ I G+ LD++ Sbjct: 398 ALLTDLGHETAQIGIQVYGGHGYIREHGMEQYARDARITMIYEGTNGVQALDLVG 452 >gi|11499639|ref|NP_070881.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304] gi|2648474|gb|AAB89194.1| acyl-CoA dehydrogenase (acd-10) [Archaeoglobus fulgidus DSM 4304] Length = 409 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 32/270 (11%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA----QVEGRVGCFL 257 TE G+D+ AI ++ +K D + ++G K F+++ ++D +++LA + R F Sbjct: 151 TEPEAGSDLTAIKTKAEKDGDE-WVINGSKTFITNGTIADYYVVLAVTDPNAQPRYRGF- 208 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 L++ +P GL ++ K+G R++ T E+ F + ++G LN ++ Sbjct: 209 TTFLVKKDTP-GLKTTKIGGKLGIRASPTAEVVFKDVRVDDSAVIGQLNRGF-----YQV 262 Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L + D + + ++ + +A+ ++Y ++R G + ++ IAD+ + AA Sbjct: 263 LEFFDESRIEIAAQALGIAQGAFDRLVNYVKQRKQFGQPIAAFQALQHRIADLKTQLEAA 322 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++D+ + + + KY+ K+A + EA++ GG GYI E Sbjct: 323 RLLIYKAAWNYDQGRIDPG-------LTSMAKYYAGKLAVKICDEAVQMHGGYGYIAEYE 375 Query: 430 IARHYRESPANSILLGSG----NAMVLDVL 455 + R +R++ I G+ N + D+L Sbjct: 376 VERFFRDAKITEIYEGTKEVQLNTIARDIL 405 >gi|257455069|ref|ZP_05620312.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] gi|257447541|gb|EEV22541.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] Length = 597 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 49/330 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ ++ + DG Y ++G K F+S+ D I+LA++ G Sbjct: 164 LTEAHAGSDLGITRTKAEPNEDGSYAITGQKIFISAGEHDMADNIVHIVLARLPGAPAGT 223 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + EDGS N + +++K+G +++AT L F G+L+G N Sbjct: 224 KGISLFIVPKFNVNEDGSIGERNTVTCGSIEHKMGIKASATAVLNFDKAKGYLIGPENKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI----LIDQPVMKR 357 + + +AI ++ ++ + YA+ R +SG + D ++ Sbjct: 284 LNCMFTFMNTARIGTAIQGLTAAELAFQGGLSYAKDRLAMRALSGAKAPEQVADPIIVHP 343 Query: 358 AIADIALDIAA----ATALSFRLANSFD-EAKSRSEEAAYARIM----APITKYWCCKMA 408 A+ ++ L A AL + L+ D K E AYA M PI K + + Sbjct: 344 AVRNMVLTCKAFAEGGRALVYYLSQFSDVVTKGEGESQAYADQMLSFLTPIAKAFLTETG 403 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 ++ GG G+I E + ++ R++ I G+ LD+L Sbjct: 404 YEAANHGVQVYGGHGFIREWGMEQNVRDTRIACIYEGTTEIQSLDLLG------------ 451 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDK 498 + LGS GK + + C+E+K Sbjct: 452 ----RKVLGSQGKMLANFSKVIYQFCEENK 477 >gi|319425993|gb|ADV54067.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200] Length = 596 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNNDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ + A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPVKAKVASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI E + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQLFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|310821595|ref|YP_003953953.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|309394667|gb|ADO72126.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 382 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 35/262 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A+ + + D + L+G K W S + ++ A+ G L Sbjct: 123 FALSEAHAGSDPGALRTTAVRQGD-QWVLNGSKQWITSGAYAGVMVVWARTSGTGNKGLS 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI- 314 ++E G+ GL + ++K+G R + TV L F + +LG E K+ Sbjct: 182 AFIVEGGT-KGLHVGKHEDKMGLRGSNTVSLTFEDCHIPADQILGKEG------EGFKLA 234 Query: 315 LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364 ++ LD + ++ R +L A+ Y + RH +QPV + +AD+ + Sbjct: 235 MVALDGGRIGIASQACGVARAALEAAVRYTKDRHA-----FNQPVSEFQGPRFMMADMKV 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 IAAA L+FR A ++ + + EA+ A++ A +MA V +A++ GG GY Sbjct: 290 QIAAAELLTFRAATLKEKGQPFTREASMAKLFA-------SEMANRVCDKAVQLHGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 I+E + R+YR++ +I G+ Sbjct: 343 IDEFPVERYYRDARVQTIYEGT 364 >gi|107100735|ref|ZP_01364653.1| hypothetical protein PaerPA_01001762 [Pseudomonas aeruginosa PACS2] Length = 606 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ + + LTE + GTD+ + ++ + DG Y +SG K F+SS Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202 Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D I+LA++ +G G F+VP+ L G NG+ L+ K+G ++ Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 +AT + F GFL+G N + + +AI V+ ++ A+ YAR R Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322 Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +SG DQ + ++AIA+ A L+ + A+ + Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +++A Y R + PI K ++ M+ GG GYI E + + R++ Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439 Query: 440 NSILLGSGNAMVLDVLN 456 ++ G+ LD+L Sbjct: 440 ATLYEGTTGIQALDLLG 456 >gi|307243631|ref|ZP_07525774.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678] gi|306493000|gb|EFM65010.1| putative butyryl-CoA dehydrogenase [Peptostreptococcus stomatis DSM 17678] Length = 380 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 22/266 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA 247 P+ ++ GLTE G+D A +Q + +G Y L+G K W + P D I+ A Sbjct: 114 PLADGTLVGAFGLTEPGAGSDAGA--TQTTAVLEGDYYILNGRKCWITNGPFCDFAIVSA 171 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300 E G + + + G + ++K+G R T +L F N G L G Sbjct: 172 VTEKGKGTRGISTFIVETKWEGFSHGAHEDKMGIRGTRTSDLIFENMKIPKENLLGKLGG 231 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 V +E +I + A +V + +L EAI Y + R G + + IA Sbjct: 232 GFKVMMNTLEAGRIGV----AAQAVGVAQSALDEAIKYTKERVQFGKTISKFQNTQFTIA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A + AA L + A D +S + +++ + KY+ ++A V +A++ G Sbjct: 288 DMATKVEAARLLVHQAAQLKDNKQSPA-------LLSSMAKYYAAEVANEVAYKALQLHG 340 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G G++++ I R YR++ SI G+ Sbjct: 341 GYGFVKDYRIERIYRDARILSIYEGT 366 >gi|254234405|ref|ZP_04927728.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719] gi|126166336|gb|EAZ51847.1| hypothetical protein PACG_00254 [Pseudomonas aeruginosa C3719] Length = 606 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 43/317 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ + + LTE + GTD+ + ++ + DG Y +SG K F+SS Sbjct: 143 TEEQKQTYLVPLTEGRWGGTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGE 202 Query: 240 SD-----AFIMLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 D I+LA++ +G G F+VP+ L G NG+ L+ K+G ++ Sbjct: 203 HDLTENIVHIVLARLPDAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKA 262 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 +AT + F GFL+G N + + +AI V+ ++ A+ YAR R Sbjct: 263 SATCVMNFDGATGFLIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERR 322 Query: 344 ----VSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +SG DQ + ++AIA+ A L+ + A+ + Sbjct: 323 SMRALSGTKEPDQVADSLMHHGDVRRMLLTQKAIAEGG---RALVYLATQYADRMIQGIL 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +++A Y R + PI K ++ M+ GG GYI E + + R++ Sbjct: 380 SNDDAEYERWDDKLGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARI 439 Query: 440 NSILLGSGNAMVLDVLN 456 ++ G+ LD+L Sbjct: 440 ATLYEGTTGIQALDLLG 456 >gi|257469706|ref|ZP_05633798.1| acyl-coa dehydrogenase, short-chain specific [Fusobacterium ulcerans ATCC 49185] gi|317063938|ref|ZP_07928423.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium ulcerans ATCC 49185] gi|313689614|gb|EFS26449.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium ulcerans ATCC 49185] Length = 375 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 33/281 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ K G TE + GT + A+ G K Y L+G K +++ + ++ F++ A+ Sbjct: 113 PLAKGEKLGAFGWTESQAGTRVTAVLD-GDK-----YILNGKKVLITNALEAEIFVVFAK 166 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 E + F+V + G ++K+G R ++T EL F N ++ N Sbjct: 167 TDMEKTENNLSGFIVEK-----GAKGFTIGEPEDKMGVRGSSTCELIFENC---IVPKEN 218 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357 + KI + L+ + V+ V LA EAI Y + R V+G + + Sbjct: 219 LLRKEGTGFKIAMCTLNGGRIGVAAQAVGLAQGALDEAIKYVKEREVNGKKVSQFQHTQF 278 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ I A L++R A++ D E YA MA + K+ K+A V +A++ Sbjct: 279 LLADLQTRIDAVRLLTYRAADTKDS------EGEYAH-MASMAKFLASKVALKVTEKAVQ 331 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GG+GY+++ + R R++ I G+ + + N + Sbjct: 332 LFGGNGYLKKYPVERMLRDAKVTEIYEGTSEVQKIVIANWM 372 >gi|148380801|ref|YP_001255342.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A str. ATCC 3502] gi|153933447|ref|YP_001385086.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A str. ATCC 19397] gi|153937098|ref|YP_001388555.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A str. Hall] gi|148290285|emb|CAL84406.1| acyl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152929491|gb|ABS34991.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A str. ATCC 19397] gi|152933012|gb|ABS38511.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A str. Hall] Length = 635 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLGKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + + + S G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A+ + + S EAA A K + + ++ +A++ GGS Sbjct: 289 ATKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365 >gi|70733998|ref|YP_257638.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68348297|gb|AAY95903.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 600 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 50/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248 + LTE G+ ++ I ++ + +DG Y L G+K F+S P+S+ + +LA+ Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAADGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPP 221 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L +DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352 G L+ + + +I + + + ++ +G SL YAR R G L D Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--PQGRLPDSKDP 334 Query: 353 ---PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 PV ++A + A D+ A F + +A R + ++ Sbjct: 335 STAPVAIIQHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTTTLADAAERQQAHELLDLL 394 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 395 TPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454 >gi|83745809|ref|ZP_00942866.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|83727499|gb|EAP74620.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] Length = 915 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 57/326 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S E+ T + LTE + G+ Sbjct: 445 LCPLLTDGAIEALLTAGSEAQKQRFVPRLISGEWTGT-------------MNLTEPQAGS 491 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ M+D + +LA+ G + F+V Sbjct: 492 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFVV 551 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 552 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRG---LE 608 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ VS +A+ YAR R S + +I P +KR Sbjct: 609 YMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVKRM 668 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + + A AL++ A ++ D+A + EA Y + P+ K W +M+ V Sbjct: 669 LLTMRAMTEGARALAYVAAAACDAGHHAGDDAARKQNEALY-EFLVPVVKGWSTEMSIDV 727 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 + ++ GG G+IEE A++YR++ Sbjct: 728 TSLGVQVHGGMGFIEETGAAQYYRDA 753 >gi|328470877|gb|EGF41788.1| branched-chain acyl-CoA dehydrogenase [Vibrio parahaemolyticus 10329] Length = 384 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP +E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADIE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 + RH+R+ + IL G+ M L V LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384 >gi|89902597|ref|YP_525068.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89347334|gb|ABD71537.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 376 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE G+D + + + + D Y ++G K F++S + D I++A Sbjct: 111 PLAQGQLLGAFCLTEPHVGSDASGLRTTATREGDA-YVINGVKQFITSGQNGDVAIVIAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296 + G F+VP + G RL++K+G S+ T ++ F N G Sbjct: 170 TDKGAGKKGMSAFIVPT-----NAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ G +E +I I S M+ S V+LA YA+ R G + + + Sbjct: 225 LEGEGYKIALGALEGGRIGIAAQSVGMARSAFEVALA----YAKERQSFGTAIFNHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ A I AA L + A D + +EAA A++ A +MA V + A+ Sbjct: 281 FRLAECATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMAEQVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|332527385|ref|ZP_08403441.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax benzoatilyticus JA2] gi|332111794|gb|EGJ11774.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax benzoatilyticus JA2] Length = 595 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 142/346 (41%), Gaps = 65/346 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + DG Y ++G K F+S+ D ++LA++ Sbjct: 166 LTEPHCGTDLGMLRTKAEPQPDGTYRITGQKIFISAGEHDITPNIVHLVLARLPDAPAGS 225 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + DGS NG+ +++K+G NAT +L G L+G+ N Sbjct: 226 KGISLFVVPKFQVAADGSIGERNGIYCTAVEHKMGIHGNATCQLSLEGAVGTLVGEPNRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP--- 353 + + +++A + V + L E A+ YA+ R ++G D+P Sbjct: 286 L-----QAMFVMMNAARLGVGCQALGLTETAYQMAVAYAKDRIQMRSLTGPKAPDKPADP 340 Query: 354 -----------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 + RA A+ +A TAL + D+ R+E A ++ PI K Sbjct: 341 IIVHPDVRKMLLTARAYAEGGRALALYTALLLDREIASDDEDERAECADLVALLTPIVKA 400 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN------ 456 + A + M+ GGSGYI I + R++ N I G+ LD+L Sbjct: 401 FMTDNAWIATSHCMQVFGGSGYIRGTGIEQFVRDARINMIYEGTNTVQSLDLLGRKVLGD 460 Query: 457 ---------------LLEKGTNLFEQLFSTLEQDLGSSGKKVITIL 487 + E+G N Q F DLG K+ T L Sbjct: 461 NGKKLKKFGRIVAEFIEEEGVNESMQEFVNPLADLGDKVTKLTTEL 506 >gi|257467952|ref|ZP_05632048.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|317062238|ref|ZP_07926723.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313687914|gb|EFS24749.1| acyl-coA dehydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 636 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F+++ ++ +I+ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDYYILNGGKIFITNADKAETYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI ++ LD + ++ + +A+ A+ YA+ R G + Q V+ +AD+ Sbjct: 229 GEGFKIAMFTLDGGRIGIASQALGIAQGAFENALAYAKEREQFGKPIAFQQVISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A E K E+ A MA K + + ++ EA++ GG+ Sbjct: 289 ATKLRAARFLVYSAA----ELKENHEDYAMESAMA---KQYASDVCLEIVNEALQIFGGT 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|331015061|gb|EGH95117.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 581 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++AA R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLAALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465 Query: 467 QLFS 470 QLFS Sbjct: 466 QLFS 469 >gi|309783450|ref|ZP_07678155.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|308917781|gb|EFP63473.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 386 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 24/254 (9%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR- 252 + + LTE G+D A+I ++G + DG Y LSG K F++ +P + AF ++A+ EG Sbjct: 118 LVVSFALTEPDAGSDAASIKTKG--VKDGSDYLLSGTKRFITNAPRAGAFTLMARTEGAG 175 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-P 308 + F+VP L GL + K+G R T ++ N + N+ G P Sbjct: 176 AGGITAFIVPAALP-----GLSLGKPDRKMGQRGTKTCDVNLDNV---RVPAANIIGGEP 227 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + K + LD + +S + +A E++ YA++R G + D +++ +AD Sbjct: 228 GKGFKTAMKVLDRGRLHISALACGMASRILQESVAYAQQRKQFGQRIGDFQLVQAMLADS 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A +L +A +D AK + A K + +M V ++ GG+ Sbjct: 288 QAELLAGWSLVQSVAQRYD-AKPFGVSDPDVSMQASCAKMFTTEMVGRVADRGVQIHGGA 346 Query: 423 GYIEERSIARHYRE 436 GYI E + R YR+ Sbjct: 347 GYINEYKVERFYRD 360 >gi|330874806|gb|EGH08955.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 592 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 36/314 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAIGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++ A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465 Query: 467 QLFS-TLEQDLGSS 479 QLFS + Q +G+S Sbjct: 466 QLFSDEVRQFIGAS 479 >gi|224825725|ref|ZP_03698829.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224601949|gb|EEG08128.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 594 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 47/324 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ + S+ + DG Y ++G K Sbjct: 152 YLPKLVSGEWTGT-------------MCLTEPHCGTDLGLLKSKAEPNGDGSYSITGTKI 198 Query: 234 FLSS---PMSDAFIMLA---------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 F+S+ MS I L V+G + F+VP+ +DGS N + L++K+G Sbjct: 199 FISAGEHDMSANIIHLVLARLPDAPKDVKG-ISLFIVPKFHDDGSRNSVYCGALEHKMGI 257 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 ++NAT + G+L+G+ N + M L + + S A+ YA+ Sbjct: 258 KANATAVINLDGAKGWLIGEPNKGLSCMFTMMNAARLGCGMQGLGIGEASFQGALAYAKE 317 Query: 342 ----RHVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEA 383 R ++G D+P + ++A + + AL + ++ Sbjct: 318 RLQMRALNGVHSPDKPADPIIVHPDVRRMLLTQKAYTEAGRALTTLLALQLDIEEKHPDS 377 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 +R + A ++ P+ K + M+ GG G+I E + + R+ + I Sbjct: 378 AARQDAADLVALLTPVAKAFMTDNGYTAANMGMQVFGGHGFIREWGMEQLVRDCRISQIY 437 Query: 444 LGSGNAMVLDVLN---LLEKGTNL 464 G+ +D+L LL++G L Sbjct: 438 EGTNGIQAIDLLGRKVLLDQGQKL 461 >gi|118462433|ref|YP_881859.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254820075|ref|ZP_05225076.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] gi|118163720|gb|ABK64617.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 380 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 26/255 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+T + +DG Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALTCKA-TATDGGYRVNGAKAWITHGGIADFYSLFARTGEGGQGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V D GL + + + K+G + T + N L+ + ++I Sbjct: 186 V-----DKDTEGLTFGKPEEKMGLHAIPTTTAHYDNA---LVSAQRRIGAEGQGLQIAFS 237 Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + V LA EA+ YA++R G +ID + +AD+A + +A Sbjct: 238 ALDSGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAFLLADMAAAVDSAR- 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D A+ R Y+R A + K A V +A++ GG GY + + Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLIATDAAMKVTTDAVQVFGGYGYTRDYRVE 350 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 351 RYMREAKITQIFEGT 365 >gi|289676303|ref|ZP_06497193.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5] Length = 600 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 A V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G LN + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N+I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|241765282|ref|ZP_04763262.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241365038|gb|EER59935.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 596 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 40/284 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + ++ + DG Y + G K F++ D ++LA+V+G Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQPDGTYKIFGTKIFITYGEHDMAENIVHLVLARVQGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L +DGS N +++K+G +++ T L+F + G+L+G Sbjct: 221 GVKGISLFVVPKFLVNKDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI----- 348 N +E M I++ + + G+ +S +A+ YA+ R V G I Sbjct: 281 QENRG---LEYMFIMMNAARYAVGMQGIAISERAYQKAVQYAKDRVQSRPVDGSINASAA 337 Query: 349 LIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +I P +KR + + + A +F A+ +A +R + A+ M P+ K Sbjct: 338 IIHHPDVKRMLMTMRATVEGCRAMATVAAAAFDAAHHHPDADTRKQNQAFYEFMVPLVKG 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + + V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 398 YSTETSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|83312685|ref|YP_422949.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82947526|dbj|BAE52390.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 399 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 28/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ ++ ++ D Y L+G K F+S SD ++++ + + C Sbjct: 145 LTEPNAGSDAASLRTKAERDGDH-YVLNGTKAFISGGGRSDVYVVMVRTGAPGPKGISCL 203 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 +V E G+P GL + + + K+G ++ T + F +N G ++ + Sbjct: 204 VV----EAGTP-GLSFGKQEKKLGWKTQPTASVIFEDCRVPVANRIGAEGDGFKIAMKGL 258 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I S+ G R L AI Y +R G + + +AD+A ++ AA Sbjct: 259 DGGRINI----GACSLGGARACLEHAIEYTGQRQQFGQAISAFQATQFKLADMATELEAA 314 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R A+S D S+S +A + + K + AV A++ GG GYI+E Sbjct: 315 RLMIHRAAHSLD---SKSPQAT---VHCAMAKRMATDVGFAVTDAALQLHGGYGYIKEYP 368 Query: 430 IARHYRESPANSILLGSGNAM 450 I R++R+ + IL GS M Sbjct: 369 IERYFRDLRVHQILEGSNEIM 389 >gi|239817250|ref|YP_002946160.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239803827|gb|ACS20894.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 596 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 44/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L +DGS N + +++K+G +++ T L++ + G+L+G Sbjct: 221 GVKGISLFVVPKFLVGKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348 N +E M I ++SA +V +++AE A+ YA+ R V G + Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSMNAS 335 Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I P +KR A + +A+ A ++ A+ +A++R + A+ M P+ Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDAEARKQNQAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|187933576|ref|YP_001885630.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B] gi|187721729|gb|ACD22950.1| acyl-coA dehydrogenase [Clostridium botulinum B str. Eklund 17B] Length = 636 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE G+D ++ + DG Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGKKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 171 VTTPDIGVKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++ + +A+ A+ Y++ R G + Q V+ +AD Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I AA L + A + +S S EAA A K + + V+ +A++ GG Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDALQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365 >gi|332977280|gb|EGK14071.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 388 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++T++ +K + Y LSG K F+S S +++ G G V Sbjct: 124 LTEPNAGSDAGSLTTKAVKKDGEDYYLLSGEKTFISGAGSTDILVVMARTGNAGPKGVSA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + D G+ Y + ++K+G ++ T + F + L+G N G MK L Sbjct: 184 FVVDAHSEGISYGKNEHKMGWKAQPTRTIHFKDVKVPARNLMG--NEGEGFKFAMKGLDG 241 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ I +V + +L A++Y + R G + + ++ +AD+ AA + + Sbjct: 242 GRINIGICAVGTAQAALETALNYVQERKQFGSAIAELQSVQFKLADMLTQTIAARQMLYL 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 AN D K S+ Y + K ++ AV EA++ GG GY+ E + RH R Sbjct: 302 AANKVD--KKHSDATTY----CAMAKRLATDLSFAVANEALQLHGGYGYLNEYPLERHVR 355 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 356 DLRVHQILEGTNEIM 370 >gi|328950895|ref|YP_004368230.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] gi|328451219|gb|AEB12120.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] Length = 584 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D ++ + DG Y L+G K F+S + +D F + A+V+G FLV Sbjct: 150 LTEPGSGSDALGAKTRAELSPDGKYYILNGTKQFISNAAFADLFTVFAKVDGEHFTAFLV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R E G+ + K+G ++++T +L N +LG++ ++ + Sbjct: 210 ERSFE-----GVSVGPEEKKMGIKASSTRQLILENVKVPVENVLGEVGKGHKIAFNVLNV 264 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 +V G + +L +A YA+ RH G + +++ +A IA+ AA + +R Sbjct: 265 GRYKLGAGAVGGAKEALGQAARYAKERHQFGQPIASFGAIRQKLARIAIKTFAAESAVYR 324 Query: 376 LANSFD---EAKSRSEEA-----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 D E K +E YA + A I K ++ + EA++ GG GYI+E Sbjct: 325 TMGLIDAALEGKKGAEAVLKGIEEYA-VEASIIKVLGSEVLDYAVDEALQIHGGYGYIQE 383 Query: 428 RSIARHYRESPANSILLGS 446 I R YR+S N I G+ Sbjct: 384 YPIERAYRDSRINRIFEGT 402 >gi|172064817|ref|YP_001815529.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171997059|gb|ACB67976.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 596 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 57/371 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMADNIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ + +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFMVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKRA 358 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + + A AL++ A D A S+EA R + P+ K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHSDEATRTRHQAIYEYLVPVVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFS 470 + ++ GG G+IEE A++YR++ +I G+ D++ L G + + L + Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTLRDGGAVAKALIA 467 Query: 471 TLEQDLGSSGK 481 + + + GK Sbjct: 468 EIGDTVAALGK 478 >gi|192289955|ref|YP_001990560.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283704|gb|ACF00085.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 374 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 21/253 (8%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLV 258 GLTE +GG+D+ A +++ + DG + ++G K F+++ +D +++ A+ E R G FLV Sbjct: 120 GLTEPKGGSDLMAASTKATRTGDG-WIINGVKRFITNGGWADWYMVFARTSEKRFGLFLV 178 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED--MK 313 + + G+ + + K+G R++ T ++ N LLGD + +K Sbjct: 179 NK-----ADPGVSFGAREKKMGMRASPTSDVILDNVIVPEWRLLGDPERGAEYINKALLK 233 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + + ++G +L EA+ Y + R G + + +++ +AD+A+ + AA A + Sbjct: 234 SRMQMSAHALGIAG--AALTEALRYTKERVQFGQPVAEFQLVRGLVADMAIKVEAARA-T 290 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R A + A+ A I K C A AV +A++ GG GY+++ + R Sbjct: 291 LRSACELYIGGDPA-----AKTQASIAKVLCSDAAMAVTTDAVQLHGGYGYLQDYPVERM 345 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 346 MRDAKVTQIWEGT 358 >gi|229592983|ref|YP_002875102.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] gi|229364849|emb|CAY52897.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] Length = 589 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T +M A+ T + K+ + E+ T + LTE GT Sbjct: 125 MYPGLTHGAMSAIHAHGTAEQKDTYLSKLTAGEWTGT-------------MCLTEAHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------------AQVEGRVGCFL 257 D+ I ++ +DG Y ++G K F+S+ D + + A +G + F+ Sbjct: 172 DLGLIKTRAVPQADGSYAVTGSKIFISAGEHDMSVNIIHLVLAKLPDAPAGTKG-ISLFI 230 Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 VP+ D G N + +++K+G + +AT L F GFL+G+ N + M Sbjct: 231 VPKFHADSGERNAVHCGSIEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHA 290 Query: 317 YLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGI--------LIDQPVMKRAIADIAL 364 L + + + S AI YA + R ++G +I P ++R + + Sbjct: 291 RLGTGMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPEKAADPIIVHPDVRRMLLTMKA 350 Query: 365 DIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AL++ A D +A R + + PI K + V M+ Sbjct: 351 FNEGNRALTYFTAQLLDTAHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQV 410 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GYI E + + R++ I G+ LD+L Sbjct: 411 FGGHGYIREWGMEQLARDARIAPIYEGTNGIQALDLLG 448 >gi|226308146|ref|YP_002768106.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187263|dbj|BAH35367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 392 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ +G + +TE G+D+ IT++ + D Y +SG K Sbjct: 122 WLPKLVSGEW--------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-YLISGAK 166 Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 F+S+ + D I+ A+ + G G L+ ++D +P G R+ K+G + T E Sbjct: 167 TFISNGRNCDLVIIAAKTDPGLGARGVSLIVAEVDDNTP-GFERGRILEKVGQKGQDTTE 225 Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRH 343 L F LLGD TG + M+ L+ L + + + M ++A + Y + R+ Sbjct: 226 LFFDRLRVPATNLLGDRE-GTGFAQLMQQLLPERLICGVAATAAMERAVALTVEYTKSRN 284 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402 + G L D + + ++A +++ R++ +F D+ + A + KY Sbjct: 285 MFGQTLFD-------LQNTRFELAECASIA-RISRTFIDDCIVKYLAGQLDATTAAMAKY 336 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W AVI ++ GG GYI E IA+ Y ++ I GS M Sbjct: 337 WLTDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVM 384 >gi|323497125|ref|ZP_08102145.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326] gi|323317700|gb|EGA70691.1| branched-chain acyl-CoA dehydrogenase [Vibrio sinaloensis DSM 21326] Length = 384 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 93/371 (25%), Positives = 158/371 (42%), Gaps = 42/371 (11%) Query: 120 WDRS--FEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVALMTTP 168 WD F V +QA ++ LY +++L+A + ++ S A MT Sbjct: 31 WDEEQLFPKSVLQQAGELGFMSLYTPEDQGGLALSRLDASIIFEQLAMGCTSTTAFMT-- 88 Query: 169 RVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +H W F++E + P T +G LTE G+D A++T+ K D Sbjct: 89 -IHNMVTWMVASFAQEAVKAHFCPKLITGEWLGSYCLTEPNAGSDAASLTTSATKQGDQ- 146 Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 Y ++G K F+S ++ +++A+ V F+VP G+ Y R + K+G Sbjct: 147 YIINGSKVFISGAGDTEVLVVMARTSDDGAKGVSAFVVP-----ADAEGISYGRKEPKMG 201 Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335 S T + F +LLG+ G + MK L ++ A SV + +L A Sbjct: 202 WNSQPTRSVTFEQVSIPAEYLLGE--EGQGFIFAMKGLDGGRINIATCSVGTAQHALNAA 259 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y + R G L ++ +AD+A ++ AA L A D+ A Sbjct: 260 LQYVQERKQFGQALAHFQGLQFKLADMATELVAARQLVRLAAYKLDQGDPE------ATT 313 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + + V +A++ GG GYI+E + RH+R+ + IL G+ M L + Sbjct: 314 YCAMAKRFATDVGFNVCDQALQIFGGYGYIKEYPLERHFRDVRVHQILEGTNEIMRLIIA 373 Query: 456 -NLLEKGTNLF 465 +L +GT + Sbjct: 374 RRVLTEGTQIL 384 >gi|307296783|ref|ZP_07576601.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306877696|gb|EFN08922.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 380 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 47/292 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ S E V + +TE G+D+ + + ++ D Y ++G K Sbjct: 113 WLPKMISGE-------------VITAIAMTEPGAGSDLQGVKATARRDGDE-YVINGSKT 158 Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+SS +D I++A+ + G V +L + + G R +KIG R+ T EL FS Sbjct: 159 FISSGQNADLIIVVAKTDADAGAKGVSLILVEATREGFKRGRNLDKIGQRAADTSELFFS 218 Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 + F +L+ L P E + I AI + +G + + EA+ Y Sbjct: 219 DVRVPASNLLGQEGKGFTYLMTQL-----PQERLSI------AISAQAGAQRAFDEAVAY 267 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 + R G + D + +A++A + A D A SR A Sbjct: 268 TKDRKAFGRTVFDFQNTRFTLAELATRLQVGWA-------HLDWALSRHLRGELTAAEAS 320 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K + ++ V +A++ GG+GY+ E +IAR +R++ I G+ M Sbjct: 321 AAKLFHSELNFEVCDKALQLHGGAGYMNEYAIARLWRDARVQRIYGGTSEIM 372 >gi|291407027|ref|XP_002719859.1| PREDICTED: short-chain acyl-CoA dehydrogenase [Oryctolagus cuniculus] Length = 412 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 34/276 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGD-TWVLNGTKAWITNSWEASATVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R+++T L F + LLG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCHIPRDNLLGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+A ++YA R G L ++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQAVQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K ++EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + E RHYR++ I G+ L + L K Sbjct: 373 VSEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 408 >gi|290969187|ref|ZP_06560712.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] gi|290780693|gb|EFD93296.1| acyl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] Length = 380 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 36/274 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC-F 256 LTE G+D +++++ K DG Y L+G K F+++ +++ F++ A G Sbjct: 122 FALTEPGTGSDAGSVSTRAVKTEDGKGYVLNGTKCFITNGALAEMFVVFANTRKTGGIRG 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED----- 311 L ++ G+P G + +NK+G RS+ T EL F + F P ED Sbjct: 182 LTAFIVRKGTP-GFTVGKAENKMGIRSSNTTELIFQDCFV-----------PAEDRLGRE 229 Query: 312 ---MKILI-YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362 +I + LD+A V + V +AEA YA+ R G + +++ IAD+ Sbjct: 230 GQGFRIAMNTLDAARPLVGAVSVGIAEAAFRACSEYAKVRVQFGKPIASFEMVQSMIADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A++I AA + + D+ S +AA ++K + +A V A++ +GG Sbjct: 290 AIEIEAARMMVQKACWMKDQGLDFSRQAA-------MSKCYASDVAMRVTTNAVQVMGGY 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GYI+E + ++ R++ I G+ L + N Sbjct: 343 GYIKEYPVEKYMRDAKIMQIYEGTNQIQRLVIAN 376 >gi|47570205|ref|ZP_00240858.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] gi|47553111|gb|EAL11509.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] Length = 381 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDSVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|312197807|ref|YP_004017868.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311229143|gb|ADP81998.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 383 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--C 255 L+E G+D AA+ T+ + G Y LSG K W +D + + A+ EGR G C Sbjct: 127 LSEPHAGSDPAALRTTATPPTTTGGDYVLSGTKAWVTHGGAADFYTVFARTGEGRGGISC 186 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLV D S GL + K+G ++ T ++ F + + D + P + + I Sbjct: 187 FLV-----DASTPGLIVYPPERKMGLTASPTTQIGFEDA---PVADSRLVGVPGQGLPIA 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDS + ++ LA+ AI YAR R G +ID + +AD+A + ++ Sbjct: 239 LSALDSGRLGIAAAATGLAQRALDDAIAYAREREAFGRPIIDHQGLGFLLADMAAAVESS 298 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A A D + S+ A+ A+++A A V +A++ GG+GY ++ Sbjct: 299 RATMLTAARLRDAGRPFSKAASIAKLVA-------TDAAMKVTEDAVQVFGGAGYTKDYP 351 Query: 430 IARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 352 VERYMREAKVMQIFEGT 368 >gi|148651933|ref|YP_001279026.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571017|gb|ABQ93076.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 606 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 77/343 (22%), Positives = 143/343 (41%), Gaps = 52/343 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + LM T + PK+ + T + LTE + GT Sbjct: 126 MYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTWSGT-------------MCLTEPQAGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ DG Y L+G K F+SS D I+LA++ EG G F+V Sbjct: 173 DLGQVKTKAVPQEDGSYTLNGTKIFISSGEHDLTDNIIHIVLARLPDAPEGTRGISLFIV 232 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ E G NG+ +++K+G S+AT L F N G+L+G+ N + Sbjct: 233 PKFNINEEGEAGERNGVSCGSIEHKMGIASSATCVLNFDNAKGYLIGEPNRGLKAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQPVMKRAIAD 361 + + I ++ ++ A+ YA+ R +SG +I+ ++R + Sbjct: 293 NTARIGTGIQGLAHCELAFQNALPYAKERRSMRTLSGTKEPEKVADAIINHADVRRMLLT 352 Query: 362 IALDIAAATALSF---RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + ++ + R A+ + + + + + PI K + ++A Sbjct: 353 MKAFAEGGRSMIYHAARYADKMSQGVAENNNEEFEKWDDKLGFYTPILKGFLTELAIEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 E + GG GYI+E + R++ +++ G+ LD+L Sbjct: 413 KEGQQVYGGHGYIKEWGMELIARDARISTLYEGTTGVQALDLL 455 >gi|159184750|ref|NP_354421.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|159140038|gb|AAK87206.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 520 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 39/330 (11%) Query: 151 LMSPSVTSASMVALMTTPR--VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 +M+ T A+ L T V +W P++ + E+ T + ++E G Sbjct: 111 MMASGSTRAACHLLAETAEGAVADEWVPRLAAGEWAAT-------------ICISEPDAG 157 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQVEGRVGC-----FLV 258 +D+A + S+ +G + + G K ++S M +LA+ G FLV Sbjct: 158 SDLARLRSRA-VFREGAWRIEGRKIWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLV 216 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 P + DG NG+ +R++ K+G + T L F G LLG+ + M L+ L Sbjct: 217 PDEI-DGERNGVTVERIEEKMGLHGSPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRL 275 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGG------ILIDQPVMKRAIADIALDIAAATAL 372 + + ++ A YA+ R G + P ++R + + L A Sbjct: 276 QTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAIAHHPDIRRQLQEARLRTETLRAA 335 Query: 373 SFRLANSFDEAKSRSEE------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + LA D A+ +E A +R + P+ K + V +A++ +GG+GY Sbjct: 336 TLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTR 395 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456 E + ++ R++ +I G+ +D+L Sbjct: 396 EWPLEQYLRDARVMTIYEGTTGMQAIDLLT 425 >gi|254292807|ref|YP_003058830.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254041338|gb|ACT58133.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 591 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 29/285 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA------QVE 250 + LTE G+D+ A+ S+ DG + ++G K F++ ++D I L E Sbjct: 161 MNLTEASAGSDVGALKSKAIPNDDGSFSITGQKIFITWGEHDVTDNIIQLVLARTPDSPE 220 Query: 251 GRVGC--FLVPRLL--EDGS-PNGLCYQ--RLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ +DGS + YQ L+ KIG ++ T +E++ G+L+G+ N Sbjct: 221 GSRGISLFLVPKFFVNDDGSLGDRNTYQCIGLEEKIGIHASPTCVMEYNGAKGWLIGEEN 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------VSG-GILIDQPVMK 356 + M L + V+ ++ A YAR R V G +I P +K Sbjct: 281 KGLAAMFIMMNAARLQVGLQGVAVCESAMQAANAYARDRKQGSAPGVQGDAAIIHHPDIK 340 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPA 410 R + +A AA A+ + A + D A+ +++A+ A+ ++ PI K W Sbjct: 341 RTLVSMAATTQAARAIVYAAAGASDLAEHSTDDASKAKFKQREDLLVPIAKAWATDRGCE 400 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + +A++ GG G++ E A+ ++ N I G+ +D++ Sbjct: 401 MANQAVQVYGGMGFMNETDAAQIMLDARINPIYEGTNGIQAMDLV 445 >gi|241662479|ref|YP_002980839.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240864506|gb|ACS62167.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 594 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/327 (23%), Positives = 149/327 (45%), Gaps = 59/327 (18%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQLFVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+A + ++ + + DG + + G K F++ D ++LA+ G + F+V Sbjct: 171 DLALVRTRAEPVGDGTFKIFGTKIFITWGEHDMAENIVHLVLARTPGAPEGVKGISLFVV 230 Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 P+ + + P+G R +++K+G +++ T L+F + G L+G+ N Sbjct: 231 PKFMVN--PDGSLGARNDAHCVSIEHKLGIKASPTAVLQFGDNGGAIGTLVGEENRG--- 285 Query: 309 VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMK 356 +E M I++ + + G+ VS +A+ YAR R S + +I P +K Sbjct: 286 LEYMFIMMNAARYAVGMQGIGVSERAYQKAVAYARERVQSRPVDGSAAKAVPIIHHPDVK 345 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A+ + A +A A + + + +R + AA + PI K W +M+ Sbjct: 346 RMLLTMRAMTEGARALAYVAAAACDAGHHAADDAARKQNAALYEFLVPIVKGWSTEMSID 405 Query: 411 VIAEAMECIGGSGYIEERSIARHYRES 437 V + ++ GG G+IEE A+ YR++ Sbjct: 406 VTSMGVQVHGGMGFIEETGAAQFYRDA 432 >gi|71735218|ref|YP_276814.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555771|gb|AAZ34982.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 592 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA+ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGDYKITGSKIFITGGEHDLTENIIHLVLAKFPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDDATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|229592985|ref|YP_002875104.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] gi|229364851|emb|CAY52900.1| putative dehydrogenase [Pseudomonas fluorescens SBW25] Length = 601 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/341 (21%), Positives = 137/341 (40%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQTAYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + L++K+G NAT + F GFL+G N + Sbjct: 233 PKFLPNADGSIGERNAVTCGSLEHKMGIHGNATCVMNFDAATGFLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ +S + + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLSHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415 + A+ + A D K +++ A M PI K + ++ Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGTDDEAKKHADGLLAFMTPIAKAFMTEVGFESANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|146309093|ref|YP_001189558.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145577294|gb|ABP86826.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 592 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 36/303 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + DGS N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKFMVGADGSLGEKNALGCGSIEHKMGIKASATCVMNFDGATGYLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LNAMFTMMNYERLGVGIQGLALGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++ R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDKDTAKRADELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 A + GG G+I E + R+ I G+ LD++ ++ G + + Sbjct: 406 ALETTVHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQSLDLMGRKIVGSGGSYY 465 Query: 466 EQL 468 + L Sbjct: 466 KHL 468 >gi|134292556|ref|YP_001116292.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135713|gb|ABO56827.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 586 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 82/360 (22%), Positives = 151/360 (41%), Gaps = 41/360 (11%) Query: 123 SFEPVVRKQA--HKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKI 178 + +P Q H + A ++A LMSP +T ++ V+ RV +D PKI Sbjct: 96 ALDPACGGQGLPHLLDVALQEMLAGANHAWLMSPGLTHGAVACVSAHGCARVKRDILPKI 155 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDGIYCLSGHKWFLS 236 S + T + +TE + G+D+ + ++ DG Y +SG K F++ Sbjct: 156 ASGAWLTT-------------MCITEPQAGSDLGLLRTRAAPDPTGDG-YRISGSKLFIT 201 Query: 237 SPMSD-----AFIMLAQVE----GRVGC--FLVPRLLEDGSP---NGLCYQRLKNKIGNR 282 D ++LA++ G G F+VP+ L+ NG+ +++K+G + Sbjct: 202 GGDHDLTENIVHLVLARLPDAPAGTKGLSLFVVPKWLDAAGGRVRNGIWCDGIEHKMGLK 261 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 ++ T + F G+L+GD + + M L A+ V + A YA R Sbjct: 262 ASPTCTMRFDAALGWLVGDAHRGLAAMFVMMNAARLQVAMQGVGHAHSAWQAASAYAGER 321 Query: 343 HVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARI 395 I Q P ++R + D + A+ + +A+ D +A +R A + Sbjct: 322 VQGRAASIAQHPAIRRILLDARATVEGERAIGYWIAHWLDVAAHDPDASARDAATKLASL 381 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + A + A++ GG GY+ E I + R+ + + G+ +D+L Sbjct: 382 LTPVAKAFFTANGFATASNALQVFGGYGYVHEYGIEQTLRDCRVSMLYEGTNEIQAIDLL 441 >gi|322705526|gb|EFY97111.1| isovaleryl-CoA dehydrogenase IvdA, putative [Metarhizium anisopliae ARSEF 23] Length = 401 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 34/270 (12%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +K+ DG Y L+G K W + Sbjct: 146 NGSPEQKKKYLPGLIAGTKIGALAMSESGSGSDVVSMRTSAKKV-DGGYLLNGSKMWITN 204 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + L + +G R +K+G R + T EL F N F Sbjct: 205 GPDADLIVVYAKTEPDKGSKGITAFLVETKADGFSCARKLDKMGMRGSNTGELMFDNVFV 264 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350 ++G +N G V + + L+ ++S M+ +L A+ ++ +R G + Sbjct: 265 PEDNVVGSVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQFGSPIA 321 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAP 409 +++ +AD+ + A+ A ++ A DE R+++ A A + A C Sbjct: 322 HNQLVQGKLADMYTKLQASRAYTYATARQVDEQGVIRTQDCAGAILYAAERATEC----- 376 Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRE 436 A++CI GG GY+EE +R RE Sbjct: 377 -----ALDCIQLLGGMGYVEEMPASRLLRE 401 >gi|126463158|ref|YP_001044272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104822|gb|ABN77500.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 562 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 23/291 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE + G+D+ A+ ++ + + DG Y ++G K +++ +D ++LA++ + Sbjct: 161 MNLTEPQAGSDVGAVRTRAEPLEDGTYAITGQKIYITWADTDFNANVCHLVLARLPDGPQ 220 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ L D G N + L+ K+G + T +++ G+L+G + Sbjct: 221 GTRGISLFLVPKFLPDAEGRPGPRNAVTVVSLEEKLGLHGSPTAVMDYDGAKGWLVGAPH 280 Query: 304 VSTGPVEDM--KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + M + + + V+ A A RR+ GGI I+ ++R +A Sbjct: 281 KGMAAMFTMMNNARLGVGVQGVGVAEAATQAAVAYAMERRQGGPGGI-IEHADVRRMLAV 339 Query: 362 IALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + + +A A++ A + D A + E A A ++ PI K + + V + ++ Sbjct: 340 MKAETFSARAIALACAVALDMGRATGQPEWQARAALLTPIAKAYGTDVGIEVASMGVQVH 399 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQL 468 GG+G+IE A+ R+ +I G+ +D++ +++ G F L Sbjct: 400 GGTGFIEGTGAAQFLRDVRVTAIYEGTNGIQAMDLVGRKMMDGGEAAFRLL 450 >gi|299136480|ref|ZP_07029663.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8] gi|298600995|gb|EFI57150.1| acyl-CoA dehydrogenase domain protein [Acidobacterium sp. MP5ACTX8] Length = 387 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 42/304 (13%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K W PK+ S E+ + GLTE G+D + + K+ DG + L+G Sbjct: 112 RKRWIPKLASGEWLGS-------------WGLTEPGSGSDAGGMRTTAMKV-DGGWLLNG 157 Query: 231 HKWFLSS-PMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 K F+++ +D ++LA + G + FLV + + P + +NK+G R+ Sbjct: 158 SKTFITNGTYADCALVLAVTDKEKSTHGGISAFLVEKGTKGFRPG-----KKENKLGLRA 212 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIH 337 + T EL F N L+ + N+ E K + LD +S++ + + +A A+ Sbjct: 213 SDTAELIFENC---LIPEENIVGKLGEGFKDAMRVLDGGRISIAALSLGMARGALDAAMK 269 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA++R G + + ++ +AD+A + AA L+ R A + D + + EAA A++ A Sbjct: 270 YAQQRRQFGKAISEFQAIQFKLADMATQLDAAWLLTMRAARTKDAGQKVTMEAAMAKLYA 329 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 + A + E ++ GG G+I++ + YR+ +I G+ + + Sbjct: 330 S-------EAACRICDEGVQIHGGYGFIKDYPAEKFYRDVKLCTIGEGTSEIQRMVIARE 382 Query: 458 LEKG 461 L KG Sbjct: 383 LLKG 386 >gi|302660472|ref|XP_003021915.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517] gi|291185835|gb|EFE41297.1| hypothetical protein TRV_03945 [Trichophyton verrucosum HKI 0517] Length = 633 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G + LSG K W +SP+SDAF++ A+++G++ F Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFFSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 225 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 +V R D P G L +KNK R++ T ++ N + ++ GP Sbjct: 226 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 278 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 279 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 336 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T + ++A DE K+ E M + K C A A E GG+ + Sbjct: 337 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 389 Query: 427 ERSIARH 433 E I RH Sbjct: 390 EYHIGRH 396 >gi|330970884|gb|EGH70950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 592 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352 + M L I + SG+R S A+ YA+ R S +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++ A R ++ P++K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLVALLTPVSKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|66047901|ref|YP_237742.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] gi|63258608|gb|AAY39704.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] Length = 592 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352 + M L I + SG+R S A+ YA+ R S +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++ A R ++ P++K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|58262444|ref|XP_568632.1| acyl-CoA oxidase [Cryptococcus neoformans var. neoformans JEC21] gi|134118936|ref|XP_771971.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254575|gb|EAL17324.1| hypothetical protein CNBN1510 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230806|gb|AAW47115.1| acyl-CoA oxidase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 429 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 29/272 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ + + S G Y L+G K W +S ++ F++ A V+ G Sbjct: 170 LSEPNAGSDAFALQTTAKLDSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGIT 229 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF++ + + G+ + + K+G R+++T L F + + NV + KI Sbjct: 230 CFIMSKDM------GVEIAKKEAKLGIRASSTCLLNFDDV---KIPKENVVGEIGKGYKI 280 Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I L+ + ++ + LA+ ++ YA +R G + + M A++A +I A Sbjct: 281 AIEILNEGRIGIAAQMIGLAQGAFEKSLEYAYQRKQFGKPVGEFQGMSFQFAEVATEIEA 340 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++ A +E + ++EAA A KY+ +A A+E GG G++ E Sbjct: 341 ARLLTYNAARLKEEGRPFTKEAAMA-------KYYASVIAQKAAGSAIEWAGGQGFVREV 393 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +++R+S +I G+ N + + L K Sbjct: 394 GLEKYWRDSKIGAIYEGTNNIQLDTIAKFLRK 425 >gi|196036724|ref|ZP_03104116.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|228946184|ref|ZP_04108517.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195990688|gb|EDX54664.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|228813475|gb|EEM59763.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 381 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDIN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|94310754|ref|YP_583964.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93354606|gb|ABF08695.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus metallidurans CH34] Length = 429 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A+ + + D Y L+G K F++ +P++ F ++A+ + G Sbjct: 165 FALTEPEAGSDATALQTTAVRDGDA-YILNGTKCFITNAPIAGLFTVMARTDPANLGAGG 223 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308 + F+VPR GL R K+G + E+ F N + G+ G Sbjct: 224 ISAFIVPR-----ETPGLSTGRPYQKMGQAGSPVSEVHFDNCRVPAVNLIGGEEG--KGF 276 Query: 309 VEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L I+L +A+ + +R+ L +A+ + R G +L D +++ IAD Sbjct: 277 RTAMKVLNKQRIHL-AALCTGPAIRM-LEDAVRFVTERKQFGQVLADFQLVQAMIADCQT 334 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI AA AL A D + + +A+ I KY+ +M V ++ GG GY Sbjct: 335 DIHAARALILETARKRDLGEDVTMQAS-------ICKYFASEMCGRVADRCVQLFGGYGY 387 Query: 425 IEERSIARHYRE 436 I + I R YR+ Sbjct: 388 IADYGIERFYRD 399 >gi|329889533|ref|ZP_08267876.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] gi|328844834|gb|EGF94398.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] Length = 594 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 70/400 (17%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ AS+ AL H+ + PK+ S E+ T + LTE G+ Sbjct: 124 LCPMLSLASIEALEQVGNEHQKATYLPKLVSGEW----------TGAMV---LTEPHAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ A+T+ DG Y L+G K F++ DA ++LA++ + FL Sbjct: 171 DLGALTATAVPNGDGTYALTGQKIFITWGDHDATDNIVHLVLARLPDAPAGPKGISLFLT 230 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N +++K+G ++ T + + L+G N Sbjct: 231 PKFAVNADGSLGERNAFRPVGVEHKLGIHASPTCVMSYEGARAELVGQPNQGLA-----H 285 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAIA 360 + + +++A ++V V +AE A+ YA R + + D P ++R ++ Sbjct: 286 MFVMMNAARLAVGVEGVGIAERAYQHALAYALERRQGRSVWTGEKDAPIFDHPDVRRMLS 345 Query: 361 DIALDIAAATALSFRLANSFD---EAKSRSEEAAYA---RIMAPITKYWCCKMAPAVIAE 414 + +AAA A+ + D A S E A+ + PI K W + V + Sbjct: 346 VMKAKVAAARAICLSTGVAADLARHASSEEERKAWKGREDLFTPIAKAWSTDVGCEVASL 405 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 ++ GG G+IEE A++YR++ I G+ +D++ L Sbjct: 406 GVQVHGGMGFIEETGAAQYYRDARITPIYEGTNGIQAMDLVG-------------RKLSM 452 Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 D G S K +I ++ +L + D+ A E+ A A A Sbjct: 453 DGGESAKALIAEMK--ATLAQIDRLYAGKPVERFATAIEA 490 >gi|146284190|ref|YP_001174343.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145572395|gb|ABP81501.1| probable acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 600 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 73/355 (20%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S P+S+ + Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNDDGSLGERNDVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 N G+L+G+ + + M +I + + + ++ +G SL +YAR R Sbjct: 271 DNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSL----NYARER--P 324 Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P++ ++A + A D+ +A RL + DE + Sbjct: 325 QGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSA---RLVD--DEHTAE 379 Query: 387 SEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 SEEA + ++ PI K W + A++ +GG GY E + ++YR++ N Sbjct: 380 SEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNP 439 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 I G+ LD+L L Q+ G+ +++I +++D E Sbjct: 440 IHEGTHGIQSLDLLG-------------RKLMQNKGAGLRQLIGLIQDCCQRAAE 481 >gi|109897732|ref|YP_660987.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109700013|gb|ABG39933.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 606 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ DG Y + G K F+S+ D I+LA++ G Sbjct: 165 LTEPQCGTDLGQVKTKAIPNDDGTYDIVGTKIFISAGEHDLTENIIHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP++ D G N + +++K+G ++++T L F N G L+G N Sbjct: 225 RGISLFIVPKVQVDQQGNLGEGNKVTCGAIEDKMGIKASSTAVLNFDNAKGVLIGPENKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +A+ V ++ ++ YA+ R V+ I++ Sbjct: 285 LECMFTFMNTARVGTALQGVCASELAYQNSLLYAKDRLSMRALTGKKCPDKVADPIIVHP 344 Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSE-EAAYARI--MAPITKYWCCKM 407 V K + A+ + + ++ + + AK+ +E E A R+ + PI K + +M Sbjct: 345 DVRKMLMTQKAISEGGRAMIYYTAKIVDEIEMAKTDAEREKADDRLGFITPILKAFLTEM 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ M+ GG GYI+E + + R+ +++ G+ LD+L LL +G +L Sbjct: 405 GCESTSQGMQIFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLGRKILLTRGKSL 464 >gi|309389794|gb|ADO77674.1| butyryl-CoA dehydrogenase [Halanaerobium praevalens DSM 2228] Length = 379 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + GLTE GTD +A + + D Y L+G K F+++ +D FI+ A Sbjct: 113 PLARGDKLGAFGLTEPDAGTDASAQKTTAELDGDE-YILNGSKIFITNAGEADTFIVFAM 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + + G + +NK+G ++ T EL F D V P Sbjct: 172 TDKSKGTRGISAFIVEREYPGFSVGKKENKLGINASDTRELIFK--------DCRV---P 220 Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPV 354 E++ K + A+ ++ G R+ +A E + Y + R G + Sbjct: 221 KENLLGKEGMGFKIAMATLDGGRIGVAAQALGIAQRALDETVQYVKERQQFGRAISKFQG 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ IA++A + AA L ++ A + D + S+EAA A KY+ + A AV + Sbjct: 281 LQWEIAEMATKVEAARLLVYKAAKTKDSGQRYSKEAAMA-------KYYASEAAFAVANK 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GYI+E + R R++ I G+ Sbjct: 334 AIQLHGGYGYIKEYPVERLLRDAKITEIYEGT 365 >gi|288930013|ref|ZP_06423854.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288328672|gb|EFC67262.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 569 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 24/289 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + DG + ++G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLINGVKRFITNGDSDIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G+ + G ++ + L Sbjct: 231 RGLSMFIYDKRQGGVTVRHIENKLGIHGSPTCELVYKNAKAELCGETRL--GLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E ++YAR R +ID P + +A + + A ++ Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEGLNYARERRQFETNIIDFPAVYDMLARMKAKLDAGRSI 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D K+ R+E+ Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDVYKALDDIARERKLTSEERAEQKKYMRLADAFTPLAKGMNSEYANQNAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 ++ GGSG+I E R YR++ SI G+ V+ + + GT L Sbjct: 409 IQIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457 >gi|325954364|ref|YP_004238024.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922] gi|323436982|gb|ADX67446.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922] Length = 380 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 35/289 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + W PK+ + E+ IG GLTE G+D +++ K D Sbjct: 103 TEEQKQRWIPKLATGEW--------------IGAWGLTEHNTGSDAGGMSTTAVKDGDE- 147 Query: 226 YCLSGHKWFLSSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + ++G K F++ +S A +M E ++E G+P G + +NK+G R+ Sbjct: 148 WVINGAKNFITHAISGDVAVVMTRTGEKGAKNNATAFVVEKGTP-GFTSGKKENKLGMRA 206 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIH 337 + T EL F N + D N E K L LD +S++ + + +A+ A+ Sbjct: 207 SETAELIFDNV---RVSDENRLGEVGEGFKQALTILDGGRISIAALSLGIAKGAYKAALK 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y++ RH G + + + +A++A +I A+ L ++ A + + S E A A Sbjct: 264 YSKERHQFGQPIANFQAINFKLAEMATEIEASELLIYKAAYLKNNQQPMSTEGAMA---- 319 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ + + EA++ GG GY ++ + + YR+S +I G+ Sbjct: 320 ---KYFASEACVRIANEAVQIFGGYGYTKDFPVEKFYRDSKLCTIGEGT 365 >gi|330938907|ref|XP_003305779.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1] gi|311317037|gb|EFQ86110.1| hypothetical protein PTT_18717 [Pyrenophora teres f. teres 0-1] Length = 428 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GL ++E G+D+ ++ + +++ DG Y L+G K W + P + ++ A+ E Sbjct: 161 GLAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKG 219 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + D + +G +K+G R + T EL F N F +LG++N +++ Sbjct: 220 ITAFIVDTTTDGFSVASKLDKLGMRGSNTGELVFENVFVPSENVLGEVN------RGVRV 273 Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ L+ ++S M+ SL + Y +R G + +++ +AD+ A Sbjct: 274 LMEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRA 333 Query: 369 ATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A ++ +A + DE + ++++ A A + + + A V A+A++ +GG GY Sbjct: 334 SQAFTYSVARAVDELHASPDIKTQDCAGAIL-------YAAERASEVAADAVQLMGGMGY 386 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 + E + R R++ I G+G + V Sbjct: 387 MNEVPVGRILRDAKLYEI--GAGTSEV 411 >gi|50083856|ref|YP_045366.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49529832|emb|CAG67544.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 596 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 49/372 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 153 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNVDGSYHITGTKI 199 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ D ++LA+ + F+VP+ L EDGS N + +++ Sbjct: 200 FITGGDHDLSQNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSLGERNAVGPGSIEH 259 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F GFL+G N + M L I + + A Sbjct: 260 KMGIKASATCVMNFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 319 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R SG ++P ++R + ++ + A+ A + + D K Sbjct: 320 YATDRLQGRSASGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 379 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A + ++ PI K + A +A C GG GYI E + + R+ Sbjct: 380 STDPEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMCFGGHGYIREWGMEQCVRDLRI 439 Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED 497 I G+ D++ ++ G + S + + G + I ++ E Sbjct: 440 AQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYISEIRDFTNTLGADLNFIKDATLDAATEV 499 Query: 498 KGLARFLTEKIA 509 + + +F+ E+ A Sbjct: 500 EAITQFIIEQAA 511 >gi|299141592|ref|ZP_07034728.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735] gi|298576928|gb|EFI48798.1| acyl-CoA dehydrogenase family protein [Prevotella oris C735] Length = 576 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 23/307 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 F E P + + LTE G+D+ + + + +DG + L+G K F+++ Sbjct: 152 FGTEEQRKKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATQDADGTWRLNGVKRFITNG 211 Query: 239 MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 SD ++LA+ EG + + D G+ + ++NK+G + T EL + N Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271 Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 L GDL + G ++ + L+ L A SV + + EA+ YA+ R G +I P Sbjct: 272 LCGDLKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397 + ++ + + A ++ + A D K+ R E Y R+ Sbjct: 330 VYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKEMKQYNRLADAFT 389 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 PI K + A +A+ GGSG+I E R YR++ SI G+ V+ + Sbjct: 390 PIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRY 449 Query: 458 LEKGTNL 464 + GT L Sbjct: 450 ITNGTYL 456 >gi|320449975|ref|YP_004202071.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320150144|gb|ADW21522.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] Length = 387 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 29/267 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 LTE G+D AAI +Q +++ G Y L G K W +P + F++ A+V EGR G FL Sbjct: 131 LTESHAGSDAAAIRTQAERVPGG-YRLHGRKTWISHAPEASFFVVFAKVAEGREGIAAFL 189 Query: 258 VPRL--LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 V R +E G P K+G +++ E+ G L+ + ++ T + + Sbjct: 190 VERGTGVEVGPP--------LPKLGQKASPAAEVYLD---GVLVPEESLITRQGFALAMR 238 Query: 316 IYLDS----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++ S A ++V +R +L EA+ YA R G L++ + +A++ +D+ AA Sbjct: 239 VFNRSRPMVAALAVGLLRRALDEALAYAVMREAFGRPLLEHQGVGVKLAEMHMDLEAARL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ + A E R EE A A ++EA++ GG+GY EE +A Sbjct: 299 LTLKAA----ELAERGEENALEAATAKAFAADAAVRG---VSEALQVFGGNGYSEEYPLA 351 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458 + YR++ I G+ L +L L Sbjct: 352 KLYRDAKVLQIYEGTSEIQRLIILREL 378 >gi|134100540|ref|YP_001106201.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291006453|ref|ZP_06564426.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133913163|emb|CAM03276.1| putative acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 383 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 37/288 (12%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A TP + W P++ S + AIG LTE G+D ++ ++ Sbjct: 95 AKSIATHGTPMQKQRWLPRLTSGQ--------------AIGCFALTEPESGSDAGSLATR 140 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 ++ D + LSG K F+++ ++ ++ A+ E V FLVP + G L Sbjct: 141 ARRDGDD-WLLSGQKMFITNGTWAEVALVFARAEEGVTAFLVPT-----ATPGFTANTLH 194 Query: 277 NKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 K+G R AT EL + G L ++ G + +I A +V + Sbjct: 195 GKLGLRGQATAELVLEDVRVPDSARLGAAGKGLGIALGALTKGRI----SVAAGAVGVAQ 250 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L A+ YA R G + +++ +A+ A+++ AA L++R A + R EE Sbjct: 251 AALTAAVRYAGERVQFGKPIAAHQLVQELLAESAVEVEAARLLTWRAAELAERGVPR-EE 309 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 A A MA KY + A V A++ GG GYI+E + ++ R++ Sbjct: 310 LATASSMA---KYHAGETAVRVANNALQVFGGYGYIDEYPVGKYLRDA 354 >gi|55981885|ref|YP_145182.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8] gi|126030329|pdb|2DVL|A Chain A, Crystal Structure Of Project Tt0160 From Thermus Thermophilus Hb8 gi|126030330|pdb|2DVL|B Chain B, Crystal Structure Of Project Tt0160 From Thermus Thermophilus Hb8 gi|55773298|dbj|BAD71739.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8] Length = 372 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 35/258 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D ++ ++ +++ G + L+G K W S+ + ++++A+ E + FLV Sbjct: 123 LTEPQAGSDAKSLRAEARRVKGG-FVLNGVKSWITSAGHAHLYVVMARTEKGISAFLV-- 179 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 E G+P GL + R + K+G + T E+ F LLG E+ + L Y Sbjct: 180 --EKGTP-GLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLG---------EEGRGLAY 227 Query: 318 ----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LDS + V+ V +A A YA R G L + + IAD+ + IAA Sbjct: 228 ALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAA 287 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A AL A D + + EA+ A++ A V EA++ +GG GY + Sbjct: 288 ARALVLEAARKKDRGERFTLEASAAKLF-------ASAAAVEVTREAVQVLGGYGYHRDY 340 Query: 429 SIARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 341 RVERYYRDAKVTEIYEGT 358 >gi|50084848|ref|YP_046358.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|15812042|gb|AAL09094.1| DcaA [Acinetobacter sp. ADP1] gi|49530824|emb|CAG68536.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 384 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPEAGSDAASLKTTAVKDGD-FYILNGTKRFITNAPHAATFTVMARTNPAIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAVERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A DE ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDEGQNISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E SI R YR+ Sbjct: 347 EYSIERFYRD 356 >gi|189192472|ref|XP_001932575.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974181|gb|EDU41680.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 428 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GL ++E G+D+ ++ + +++ DG Y L+G K W + P + ++ A+ E Sbjct: 161 GLAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTEPTAASKG 219 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + D + G +K+G R + T EL F N F +LG++N +++ Sbjct: 220 ITAFIVDTATTGFSVASKLDKLGMRGSNTGELVFENVFVPRENILGEVN------RGVRV 273 Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ L+ ++S M+ SL + Y +R G + +++ +AD+ A Sbjct: 274 LMEGLDLERLVLSAGPLGLMQASLDNVLPYTHQRKQFGTPIAHNQLVQGKLADMYTKFRA 333 Query: 369 ATALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A ++ +A + DE+ + ++++ A A + + + A V A+A++ +GG GY Sbjct: 334 SQAFTYSVARAVDESHASPDIKTQDCAGAIL-------YAAERASEVAADAVQLMGGMGY 386 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 + E + R R++ I G+G + V Sbjct: 387 MNEVPVGRILRDAKLYEI--GAGTSEV 411 >gi|317505087|ref|ZP_07963033.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606] gi|315663798|gb|EFV03519.1| acyl-CoA dehydrogenase [Prevotella salivae DSM 15606] Length = 576 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 23/307 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 F E P ++ + LTE G+D+ + + + +DG + L+G K F+++ Sbjct: 152 FGTEEQRKKYIPRISAGESMSMDLTEPDAGSDLQRVMLKATQDADGTWRLNGVKRFITNG 211 Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 SD ++LA+ E G + + D G+ + ++NK+G + T EL + N Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKKDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271 Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 L GD + G ++ + L+ L A SV + + EA+ YA+ R G +I P Sbjct: 272 LCGDRKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397 + ++ + + A +L + A D K+ R E Y R+ Sbjct: 330 VYDMLSRMKAKLDAGRSLLYMTARYVDIYKALEDISRERKLTPEERKEMKQYTRLADAFT 389 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 PI K + A +A+ GGSG+I E R YR++ SI G+ V+ + Sbjct: 390 PIAKGMNSEYANQNAYDAISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRY 449 Query: 458 LEKGTNL 464 + GT L Sbjct: 450 ITNGTYL 456 >gi|260553755|ref|ZP_05826026.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260405155|gb|EEW98654.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 600 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + SDG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNSDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q S + + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521 >gi|197104024|ref|YP_002129401.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum HLK1] gi|196477444|gb|ACG76972.1| acyl-CoA dehydrogenase family protein [Phenylobacterium zucineum HLK1] Length = 582 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 57/343 (16%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T A++ AL T R + PK+ S E+ T + LTE + G+ Sbjct: 122 LCPMLTQAAIEALTLHGTERQKRLVLPKLVSGEW----------TGAMV---LTEPQAGS 168 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------VEGRVGCFL 257 D+AA+T++ + +G Y L G K F++ DA ++LA+ V+G + FL Sbjct: 169 DLAALTTRAEPDGEGGYRLHGQKIFITWGDHDATDNIIHLVLARTPDAPPGVKG-ISLFL 227 Query: 258 VPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + L+D GS N +++K+G ++ T + + L+G+L Sbjct: 228 TSKYELKDDGSLGSRNDFRPGSIEHKLGIHASPTCVMLYEGAKAELVGELGQGLA----- 282 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKRAI 359 + + +++A + V V +AE A+ +A+ R + + D P ++R + Sbjct: 283 HMFVMMNAARVQVGVQGVGIAERAFQQALAFAQERRQGRAVWSADYPAAIYDHPDVRRTL 342 Query: 360 ADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + I AA T + LA+ ++ R+ A ++ PI K W + V + Sbjct: 343 MLMKAKIEAARGICLTTGVLADLAHRAEDEDERAAAKARQELLTPIAKAWSTDVGVEVAS 402 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+IEE A+HYR++ I G+ D++ Sbjct: 403 AGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAADLVG 445 >gi|115373995|ref|ZP_01461285.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|310825230|ref|YP_003957588.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115369002|gb|EAU67947.1| acyl-coA-dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|309398302|gb|ADO75761.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 605 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 41/294 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR---- 252 LTE G+D+ A ++ + + ++ + G K F++S DA ++LA+ EG Sbjct: 168 LTEPDAGSDVGAARTRARHVGGDVWEIEGVKRFITSGEHDASENIVNMVLARPEGAGPGT 227 Query: 253 --VGCFLVPRLL--EDG---SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 + F+VP+ EDG NG+ L+ K+G + + T EL F + G L+G++ Sbjct: 228 KGLSLFIVPKFWVEEDGRMGERNGVVCTNLEKKMGIKGSVTCELTFGDGKPARGLLVGEV 287 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI------------ 350 + + + + I S++ + + A+ + R R V G L+ Sbjct: 288 HEGIRQMFHIIEQARMGVGIKSMATLSTAYLNALAFTRER-VQGSDLLAARDKTAPRVPI 346 Query: 351 -DQPVMKRAIADIALDIAAATALSFRLANSFDE--------AKSRSEEAAYARIMAPITK 401 P ++R + AL A+ D+ A +E A ++ P+ K Sbjct: 347 HRHPDVRRMLMAQKAHAEGMRALILFTASIQDQVALKGGHRATEAAELDAINDLLLPLVK 406 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +C + A ++A +++C+GGSGY+ + I ++ R+ +S+ G+ + LD+L Sbjct: 407 GYCSEKAYELLAVSLQCLGGSGYLTDYPIEQYVRDQKIDSLYEGTTHIQALDLL 460 >gi|121593019|ref|YP_984915.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120605099|gb|ABM40839.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 598 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 49/348 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL+ T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALLAHGTDEQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ + + DG Y ++G+K F+S+ + ++LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPVGDGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + L++K+G NAT ++ G L+G+ + + M Sbjct: 235 PKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPHKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK---- 356 L S+ V+ A+ YA+ R +SG I++ V K Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGKKAPDKEADPIIVHPDVRKMLLT 354 Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A A+ A + L A+S + K R + ++ PI K + Sbjct: 355 AKAYAEGARALQVFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFVTDNGHIATNAC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 M+ GG G+I+E + + R++ N I G+ LD+L G N Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN 462 >gi|239816345|ref|YP_002945255.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239802922|gb|ACS19989.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 596 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 44/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L +DGS N + +++K+G +++ T L++ + G+L+G Sbjct: 221 GVKGISLFVVPKFLVGKDGSLGARNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348 N +E M I ++SA +V +++AE A+ YA+ R V G + Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSMNAS 335 Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I P +KR A + +A+ A ++ A+ +A++R + A+ M P+ Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDAEARKQNQAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|312892236|ref|ZP_07751733.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] gi|311295366|gb|EFQ72538.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] Length = 390 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 142/303 (46%), Gaps = 40/303 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 S+ + ++A + H+ W PK+ + E+ IG GLTE G+D Sbjct: 103 SLCTGHILAFGNEEQKHR-WLPKLATGEW--------------IGAWGLTEANTGSDALG 147 Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271 + + I DG Y ++G K W + +++ + + + L+ + +G Sbjct: 148 MNTTA--ILDGDHYVVNGSKNWITHGKSGNVAVVMVRTGEKGDSHGISALVVEKGTDGFT 205 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 + + +NK+G R++ T EL F N LLG + G + MK+ LD +S++ + Sbjct: 206 HGKKENKLGMRASETTELIFDNCRVPRENLLG--SQGDGFKQAMKV---LDGGRISIAAL 260 Query: 329 RVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 + +A+ A+ YA+ RH G + + + +AD+A +I AA L + A+ + Sbjct: 261 SLGIAKGAFEAAVKYAKERHQFGQPICNFQGISFKLADMATEIEAAQLLIMQAADLKNRN 320 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 KS ++++A A KY+ ++A +A++ GG GY ++ + + YR++ +I Sbjct: 321 KSVTKQSAMA-------KYFASEVAVKAANDAVQIFGGYGYTKDFPVEKFYRDAKLCTIG 373 Query: 444 LGS 446 G+ Sbjct: 374 EGT 376 >gi|291484441|dbj|BAI85516.1| hypothetical protein BSNT_03021 [Bacillus subtilis subsp. natto BEST195] Length = 380 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 36/324 (11%) Query: 141 YLMAQLEAGHLM-SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 Y +A E G S ++ A+ V+L +P + + E T+ P+ + Sbjct: 69 YALAVEEVGKACGSTGLSYAAAVSLGASPLYY------FGTEEQKQTHLTPLASGTALGS 122 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256 GLTE G+D +Q + IS+G Y ++G K ++++ +++ V G+ G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++ L+ GL +K+G R + T E+ + LLGD P + K Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGD------PTKGFK 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +Y LD +S++ + V +A+A + YA+ R G + ++ +AD+A++I Sbjct: 235 QFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + A D ++EAAYA++ A +MA +A++ GGSGY++E Sbjct: 295 LARQMVLKAAWLKDHNHPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYMKE 347 Query: 428 RSIARHYRESPANSILLGSGNAMV 451 + R R+ A + +G G + + Sbjct: 348 YGVERMLRD--AKLMEIGEGTSEI 369 >gi|225864526|ref|YP_002749904.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|229184774|ref|ZP_04311967.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] gi|225790484|gb|ACO30701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|228598678|gb|EEK56305.1| Butyryl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] Length = 381 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|312622530|ref|YP_004024143.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202997|gb|ADQ46324.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] Length = 381 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 34/285 (11%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + +D +++ A + G PR ++E G C ++ ++K+G RS++T EL Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRSSSTTELI 212 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 F + LLG TG + MK D V+ M V +A+ AI YA+ R Sbjct: 213 FEDCKVPKENLLG--REGTGFIIAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKER 267 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401 G L ++ +AD+ ++I AA +L + D AK S+E++ ++ A Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSGAKDFSKESSACKVFAS--- 324 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 325 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|327306175|ref|XP_003237779.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] gi|326460777|gb|EGD86230.1| glutaryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] Length = 385 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 29/247 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 123 FGLTEPNHGSDPGSMETVARPHPTKKGFYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 182 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 +V R D P G L +KNK R++ T ++ N + ++ GP Sbjct: 183 VVER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 235 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 236 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T + ++A DE K+ E M + K C A A E GG+ + Sbjct: 294 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 346 Query: 427 ERSIARH 433 E I RH Sbjct: 347 EYHIGRH 353 >gi|188588929|ref|YP_001920742.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43] gi|188499210|gb|ACD52346.1| acyl-coA dehydrogenase [Clostridium botulinum E3 str. Alaska E43] Length = 636 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE G+D ++ + DG Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 171 VTTPDIGVRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGE 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++ + +A+ A+ Y++ R G + Q V+ +AD Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I AA L + A + +S S EAA A K + + V+ +A++ GG Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDALQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365 >gi|94496861|ref|ZP_01303435.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58] gi|94423537|gb|EAT08564.1| putative acyl-CoA dehydrogenase protein [Sphingomonas sp. SKA58] Length = 600 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 51/339 (15%) Query: 155 SVTSASMVALM---TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 +T+ ++ AL+ ++ + H+ + PK+ S E+ T + LTE GTD+ Sbjct: 129 GLTTGAISALLAKGSSEQQHR-YIPKMVSGEWTGT-------------MNLTEPHCGTDL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVPR 260 I ++ DG Y ++G K F+S+ D ++LA+ EG G F+VP+ Sbjct: 175 GLIKTKAVPQGDGSYAITGTKIFISAGEHDLADNIIHLVLAKTPDAPEGSKGISLFVVPK 234 Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 ++ +DG+ N + +++K+G NAT + + G+++G+ N + M Sbjct: 235 IMVGDDGALSDRNAVSCGSIEHKMGIHGNATCVMNYDGATGWMVGEENKGLAAMFIMMNA 294 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKR------ 357 L + + V+ A+HYA+ R + L P ++R Sbjct: 295 ARLGVGLQGLGQAEVAFQNAVHYAQDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEAK 354 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A+ + + TA+ L++ + + R +++ P+ K + V A + Sbjct: 355 ALTEGLRALTLWTAVQVDLSHYAETEEERQAADDLLQLLTPVVKGYGTDKGFDVAVSAQQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GYI E + ++ R++ I G+ +D++ Sbjct: 415 VFGGHGYIWENGVEQYVRDARIAQIYEGTNGIQAMDLVG 453 >gi|302186018|ref|ZP_07262691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. syringae 642] Length = 592 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ ++ +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAERQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHY------------ARRRHVSGGILIDQ 352 + M L I + SG+R S A+ Y A+ + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQSAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++ A R ++ P+ K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLVALLTPVAKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|262198232|ref|YP_003269441.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262081579|gb|ACY17548.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 609 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 88/361 (24%), Positives = 157/361 (43%), Gaps = 46/361 (12%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQK---TSVAIGLGLTEKR 206 H M+ S + A P + A I + D +A +K + + LTE Sbjct: 112 HTMAEEFMSGANTAFTMYPGLTLGVAELIEAHGTDEQKQALCEKLYDGTFGGTMCLTEPH 171 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255 G+D+ A T++ I DG Y +SG K +++ D ++LA+ +G G Sbjct: 172 AGSDVGANTTRATPIGDGKYKISGTKIYITGGDQDLSENIIHMVLARTADAPQGTRGLSL 231 Query: 256 FLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+VPR DGS N + +++K+G +AT L F G L+G + + Sbjct: 232 FIVPRDRLDGSGSNDVSVAGIEHKMGINGSATCILNFGENDECIGELVG--SEEQKGIRQ 289 Query: 312 MKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI------------LIDQPVMK 356 M L+ L + + G+ V+ + A+ YA+ R I +I ++ Sbjct: 290 MFHLMNLARIGVGIQGLAVASSAYLNALEYAKDRKQGTDIAQRKDPDAERVPIIRHADVR 349 Query: 357 RAIADIALDIAAATALSFRLANSFDEAK----SRSEEAA-----YARIMAPITKYWCCKM 407 R + D+ + ALS +L D A+ S E+AA ++ P+ K + Sbjct: 350 RMLLDMKCRVEGIRALSVKLTMHNDRARLALESGDEKAAAYHHGQVDLLVPLLKAYATDQ 409 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLF 465 + + A A++ GG+GY+++ + ++ R+S SI G+ + LD++ L +KG F Sbjct: 410 SFLICANAIQVYGGAGYLKDWPVEQYCRDSKIFSIYEGTNHIQALDLVGRKLGQKGGMNF 469 Query: 466 E 466 + Sbjct: 470 Q 470 >gi|320335140|ref|YP_004171851.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] gi|319756429|gb|ADV68186.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] Length = 393 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A++ + ++ D Y L+G K W S +D ++++A+ G V CF Sbjct: 136 LTESTAGSDAASLQLRAERDGDH-YVLNGSKAWITSGSQADTYLVMARTGGAGARGVSCF 194 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPV 309 +V E+G+P GL + R + K+G + T ++F N G L ++ + Sbjct: 195 IV----ENGTP-GLSFGRPEEKMGLHAAHTTTVQFEDVRVPAENLVGAEGEGLIIALSSL 249 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A+ ++ R + A YA R G L + + IAD+A I AA Sbjct: 250 DAGRIGI----AMQALGIARAAFEHAARYALEREQFGRKLREFEGVSFKIADMAAHIEAA 305 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ + A D + EA+ A+++A A V +A++ GG+GY E Sbjct: 306 RLVALKAAWLKDAGRPYGREASIAKLLA-------SDAAVNVTRDAIQVFGGNGYSREYP 358 Query: 430 IARHYRESPANSILLGS 446 + R YR++ I G+ Sbjct: 359 VERLYRDAKVTEIYEGT 375 >gi|229489141|ref|ZP_04383007.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229324645|gb|EEN90400.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 392 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ +G + +TE G+D+ IT++ + D Y +SG K Sbjct: 122 WLPKLVSGEW--------------VGAIAMTEPGTGSDLQNITTRAVRDGDD-YLISGAK 166 Query: 233 WFLSSPMS-DAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 F+S+ + D I+ A+ + G G L+ ++D +P G R+ K+G + T E Sbjct: 167 TFISNGRNCDLVIIAAKTDPSLGARGVSLIVAEVDDNTP-GFERGRILEKVGQKGQDTTE 225 Query: 289 LEFSN---TFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRH 343 L F LLGD TG + M+ L+ L + + + M ++A + Y + R+ Sbjct: 226 LFFDRLRVPATNLLGDRE-GTGFAQLMQQLLPERLICGVAATAAMDRAVALTVEYTKSRN 284 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402 + G L D + + ++A +++ R++ +F D+ + A + KY Sbjct: 285 MFGQTLFD-------LQNTRFELAECASIA-RISRTFIDDCIVKYLAGQLDATTAAMAKY 336 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W AVI ++ GG GYI E IA+ Y ++ I GS M Sbjct: 337 WLTDQQCAVIDRCVQLHGGYGYILEYPIAQMYADARIQRIYAGSNEVM 384 >gi|121609169|ref|YP_996976.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553809|gb|ABM57958.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 382 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 14/259 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE G+D+A +T+ ++ + Y ++G K F++ M ++ +A G G + Sbjct: 128 LAITEPSCGSDVAQLTTTARR-AGAFYIVNGGKTFITCGMRADYLTVAVRTGGPGAGGIS 186 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL DG GL LK K+G + T EL F + L+G + G + Sbjct: 187 LLLVDGDTPGLARSPLK-KMGWWACDTAELFFQDCRVPAANLIGAQDQGFGVLMHNFTQE 245 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A + RV L +A+ +AR+RH G L V++ + D+A I A L + Sbjct: 246 RLALAAAACGYARVCLHDALEWARQRHTFGQPLAQHQVIRHKLVDMATRIEATRTLLDDV 305 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A D+ +S + A A+ A T +C +A++ +GG G + + R YRE Sbjct: 306 AARLDDGQSPVAQIAMAKNFAAQTFQFCAD-------QAVQILGGMGLMRGTRVERLYRE 358 Query: 437 SPANSILLGSGNAMVLDVL 455 A + +G G V+ L Sbjct: 359 --AKIMAIGGGAQEVMKEL 375 >gi|116054234|ref|YP_788678.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|313111860|ref|ZP_07797652.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|115589455|gb|ABJ15470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|310884154|gb|EFQ42748.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 592 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP++L + G N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG G+I E + R+ I G+ LD++ Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454 >gi|89900744|ref|YP_523215.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89345481|gb|ABD69684.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 596 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 40/284 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+AA+ S+ + ++DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLAAVRSRAEPLADGSYKVFGTKVFITWGEHDMAENIVHLVLARVTGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L +DGS N + +++K+G +++ T L+F + G+L+G Sbjct: 221 GVKGISLFVVPKFLVNKDGSLGARNDVQCVSIEHKMGIKASPTAVLQFGDHGGALGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRRHVS---------GGI 348 N +E M I++ + V G+ + S +A+ +A+ R S Sbjct: 281 QENRG---LEYMFIMMNAARFGVGVQGIAIAERSYQQAVTFAKDRVQSRPVDALAPANAT 337 Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +I P +KR A + +A A ++ A+ +A+ R + A+ M P+ K Sbjct: 338 IIYHPDVKRMLMTMRAYTEGCRAMATVAAAAYDAAHHHADAEVRKQNQAFYEFMVPLIKG 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +M+ V + ++ GG GYIEE A++YR++ +I G+ Sbjct: 398 YSTEMSLEVTSLGVQVHGGMGYIEETGAAQYYRDAKILTIYEGT 441 >gi|49185378|ref|YP_028630.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|165868334|ref|ZP_02212994.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167631825|ref|ZP_02390152.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|167637642|ref|ZP_02395921.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|170685119|ref|ZP_02876343.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|170704739|ref|ZP_02895205.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|177649576|ref|ZP_02932578.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190565459|ref|ZP_03018379.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|196040402|ref|ZP_03107703.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|227814643|ref|YP_002814652.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|229122085|ref|ZP_04251301.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|254685114|ref|ZP_05148974.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066] gi|254722523|ref|ZP_05184311.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055] gi|254737565|ref|ZP_05195268.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North America USA6153] gi|254743251|ref|ZP_05200936.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B] gi|254751880|ref|ZP_05203917.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum] gi|254760400|ref|ZP_05212424.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94] gi|301054083|ref|YP_003792294.1| acyl-CoA dehydrogenase [Bacillus anthracis CI] gi|49179305|gb|AAT54681.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|164715060|gb|EDR20577.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167514191|gb|EDR89558.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|167532123|gb|EDR94759.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|170130540|gb|EDS99401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|170670479|gb|EDT21218.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|172084650|gb|EDT69708.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190563486|gb|EDV17451.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|196028887|gb|EDX67493.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|227005728|gb|ACP15471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|228661428|gb|EEL17052.1| Butyryl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|300376252|gb|ADK05156.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI] Length = 381 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|297618143|ref|YP_003703302.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145980|gb|ADI02737.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 380 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 29/300 (9%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +A T W PK S + + + + +TE G+D+AA+ ++ Sbjct: 96 APYIASYGTEDQKARWLPKCVSGD-------------IILAIAMTEPGAGSDLAAMRTRA 142 Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D Y L+G K F+S+ ++D ++ A+ + G V L + G R Sbjct: 143 VKDGDH-YILNGSKTFISNGILADLVVVAAKTDPAAGAKGVSLFLVERDTPGFIRSRQIP 201 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332 KIG + T EL F + LLG G + M+ L L +AI++V+ L Sbjct: 202 KIGLHAQDTAELFFEDCRVPASNLLG--KEGNGFIYLMQKLQQERLLAAIVNVTLAERCL 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y ++RH+ G L + +A+IA +I A L K +E + Sbjct: 260 KLTLDYVKQRHLFGKPLSSFQNTQFVLAEIATEIQLARGFVDTLVLHHMAGKDVVQEVSM 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A KYW C+M+ V ++ GG GY E I+R + ++ SI G+ M L Sbjct: 320 A-------KYWVCEMSHRVANRCVQLFGGYGYCTEYEISRLWADTRVQSIYAGTSEVMKL 372 >gi|148554389|ref|YP_001261971.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148499579|gb|ABQ67833.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 571 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 49/323 (15%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+ A+ ++ DG + +SG K F+ Sbjct: 149 PKLVSGEWTGT-------------MNLTEPQAGSDVGALRAKATPRGDGTWSISGTKIFI 195 Query: 236 S---SPMSDAFIMLAQV---EGRVGC-----FLVP--RLLEDGSP---NGLCYQRLKNKI 279 S ++D + L V +G G FLVP R+ DGSP N + +++K+ Sbjct: 196 SFGDHDLADNIVHLVLVRTPDGPAGTKGISLFLVPKYRVNPDGSPGAENDVRTVSIEHKM 255 Query: 280 GNRSNATVELEFSNTFGFLLGDL-NVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEA 335 G + T L F + G +G+L G + M ++ L+ + V + +A Sbjct: 256 GLHGSPTCVLSFGDR-GECVGELIGPEFGGMRAMFTMMNNARLNVGLQGVQAAEAATQKA 314 Query: 336 IHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + YAR R S +I+ P ++R + + AA AL + A D A + Sbjct: 315 VAYARERIQSARAGSGSPAPVAIIEHPDVRRMLLRMKALTQAARALLYYSAGMVDRA-TL 373 Query: 387 SEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 ++AA AR ++ P+ K + + V ++ GG GYIEE A+ +R+ +I Sbjct: 374 GDKAAQARLELLTPLAKAYGTDLGCEVANLGIQVHGGMGYIEETGAAQFFRDVRITTIYE 433 Query: 445 GSGNAMVLDVLNL---LEKGTNL 464 G+ D++ LE G L Sbjct: 434 GTNGIQAADLVGRKLGLEGGGTL 456 >gi|29347216|ref|NP_810719.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482] gi|298387470|ref|ZP_06997022.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14] gi|29339115|gb|AAO76913.1| acyl-CoA dehydrogenase [Bacteroides thetaiotaomicron VPI-5482] gi|298259677|gb|EFI02549.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 1_1_14] Length = 568 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 81/343 (23%), Positives = 155/343 (45%), Gaps = 36/343 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + DG + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R+++K+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVDVRRIEHKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L FE + Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETV 466 Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 + E + L S KK+ + S + KE D+ L F ++ Sbjct: 467 PCSPEMEPLMSRLKKMADLFEASTNAVKEAQDQELLDFTARRL 509 >gi|294648825|ref|ZP_06726282.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292825317|gb|EFF84063.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 375 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGHNAGLIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA HYA+ R G + + + Sbjct: 225 KQGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATHYAKERLTFGKPIFEHQAIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M+ V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMSERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+++ I R YR++ I G+ + Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|149278901|ref|ZP_01885036.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39] gi|149230520|gb|EDM35904.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39] Length = 393 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 25/279 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F+ E P T+ IG GLTE G+D +T+ + D Y ++G K W Sbjct: 114 FANESQKLRWLPKLATAEWIGAWGLTEANTGSDSLRMTTTAVQDGDE-YVINGAKNWITH 172 Query: 237 SPMSD-AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 D A +M+ E + ++E G+P G + +NK+G R++ T E+ F N Sbjct: 173 GKTGDLAVVMVRTGEQGDSKGISAIVVERGTP-GFSAGKKENKLGMRASETTEMIFDNCR 231 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 LLG N G + MK+L D +S++ + + +A+ A+ YA+ RH G Sbjct: 232 VPKENLLG--NAGEGFKQAMKVL---DGGRISIAALSLGIAKGAYEAAVAYAKERHQFGQ 286 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + + +AD+A +I AA L + A+ + ++E+A A KY+ ++ Sbjct: 287 PIASFQGISFKLADMATEIEAAELLIRQAADFKNRGIPVTKESAMA-------KYFASEV 339 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A EA++ GG GY ++ + ++YR+S +I G+ Sbjct: 340 AVRCATEAVQIFGGYGYTKDFPVEKYYRDSKLCTIGEGT 378 >gi|83643532|ref|YP_431967.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83631575|gb|ABC27542.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 386 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 39/301 (12%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+A + + W PK+ S E + LTE G+D A++ + +K Sbjct: 96 MIASFGHDELRQAWLPKLVSGE-------------LLASYCLTEPNAGSDAASLRTSAKK 142 Query: 221 ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 DG Y ++G K F+S S +++ G G V L+ G+ Y R ++K+ Sbjct: 143 --DGSDYVINGSKMFISGAGSTDVLVVMARTGEPGAKGVSALVVPADAPGVAYGRKEDKM 200 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS-----AIMSVSGMRVSLA 333 G S T + F N + N E K ++ LD A S+ + +L Sbjct: 201 GWNSQPTRAITFDNV---RIPQTNRLGAEGEGFKFAMMGLDGGRINIATCSIGTAQAALE 257 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL----SFRLANSFDEAKSRSEE 389 A Y + R G L D ++ +AD+A D+ AA + +F+L + EA + S Sbjct: 258 TAQRYMQEREQFGRKLSDFQALQFKLADMATDLVAARQMVRLAAFKLDSKHPEASTYS-- 315 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A A+ A + C +A++ GG GYI E + R+ R+S + IL G+ Sbjct: 316 -AMAKRFATDAGFKICN-------DALQIHGGYGYIREYPLERYVRDSRVHQILEGTNEI 367 Query: 450 M 450 M Sbjct: 368 M 368 >gi|77456679|ref|YP_346184.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77380682|gb|ABA72195.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 600 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 48/312 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247 + LTE G+ ++ I ++ + SDG Y L G+K F+S P+S+ + + A Sbjct: 162 MALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPA 221 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L +DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344 G L+ + + +I + + + ++ +G SL YAR R Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQGRVPDSKDPTT 336 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398 + +I ++R + + A L A FD+ + EA + ++ P Sbjct: 337 APVAIIQHADVRRMLLTQKSYVEGAFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTP 396 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456 I K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 397 IVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRK 456 Query: 457 LLEKGTNLFEQL 468 L + G +QL Sbjct: 457 LAQNGGAGLKQL 468 >gi|309779292|ref|ZP_07674054.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|308921850|gb|EFP67485.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 380 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 44/272 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTATRSRDGSHYVLNGSKIFITNGWHADVVIVVARTTPEGGAKG 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 + D S G + K+G ++ T EL F N F +L+ +L Sbjct: 184 TSLFVVDTSMEGFSKGKRLKKVGMKAQDTAELFFDNVRLPAGNLLGEEHRGFAYLMQEL- 242 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E ++I I +AI S G +L + Y R R G ++D + A+A++ Sbjct: 243 ----PWERLQIAI---TAIASAEG---ALEWTLRYVRERQAFGKSILDFQTARHALAELK 292 Query: 364 LDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 ++ ++ +LA D A A + KYW + V+ ++ Sbjct: 293 TEVQIGRVFVDQCIALKLAGKLDAA------------TASMAKYWTTDLQFKVMDRCVQL 340 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR + +S I G+ M Sbjct: 341 HGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 372 >gi|325280801|ref|YP_004253343.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] gi|324312610|gb|ADY33163.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] Length = 569 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/277 (22%), Positives = 132/277 (47%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFL 257 + LTE G+D+ A+ + +DG + L+G K F+++ ++LA+ E G Sbjct: 173 MDLTEPDAGSDLQAVQLKATYNEADGQWYLNGVKRFITNGDGHISLVLARSEAGTNDGRG 232 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + + D + N + +R++NK+G + + T EL F N L+G+ + G ++ ++ Sbjct: 233 LSMFIYDRNSNAVTVRRIENKLGIKGSPTCELVFKNAPAELVGERKM--GLIK--YVMAL 288 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +++A + + V +AEA + YA+ R G +I+ P + ++++ + ++ Sbjct: 289 MNAARLGIGAQSVGIAEAAYREGLKYAQERKQFGKAIIEFPAIYEMLSNMEAKLHGIRSV 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAY---ARIMAPITKYWCCKMAPAVIAEA 415 + A D K+ R+E Y A I P+ K + + A + +A Sbjct: 349 LYETARFVDMYKTYYHISKERALDKDERNEMKEYQKLADIYTPLQKLFASEYANEITYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 ++ GGSG++++ I R+ R++ +I G+ V+ Sbjct: 409 LQIHGGSGFMKDYPIQRYVRDARITNIYEGTSQLQVV 445 >gi|187929703|ref|YP_001900190.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|187726593|gb|ACD27758.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] Length = 381 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 48/279 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 + +TE G+D+ AI+++ ++ D Y + G K F+++ + +++A G V Sbjct: 126 IAMTEPGCGSDLKAISTRARRDGD-YYVIDGAKTFITNGFTGNLLIVAARTSGAGSKGVS 184 Query: 260 R-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303 +LE + G RL KIG +++ T EL F + FG L+G L Sbjct: 185 LFVLETENLPGFRVGRLLEKIGMQASDTAELFFDSVRVPADQLLGSVEGQGFGQLMGAL- 243 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E M I A+ + + + +L I Y ++R + G L D ++ +A++A Sbjct: 244 ----PYERMVI------AVPAAAVIDRALELTIEYTKQRKIFGAPLFDMQTTRQKLAEMA 293 Query: 364 LDIAAATALSF------RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A SF RL + + EAAY + K+WC + V+ E ++ Sbjct: 294 --TIAHVVRSFVNDCTQRLLDG-----TLDNEAAY------MAKWWCTEQQCRVVDECLQ 340 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY+ E IAR Y S I G N ++ D+++ Sbjct: 341 LFGGYGYMAEYPIARMYAASRVQKI-YGGANEVLKDLVS 378 >gi|304440341|ref|ZP_07400230.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371093|gb|EFM24710.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 752 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + + D Y L+G+K F++ +P +D +++ A Sbjct: 220 PLAKGEKIGAFGLTEPEAGSDAGGTETVAELDGD-YYILNGNKIFITNAPKADYYVVFAV 278 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL+F+N + N+ Sbjct: 279 TTPGIGTHGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELQFNNV---KVPKENLLGQE 335 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + +I + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 336 GQGFRIAMQTLDGGRIGIAAQALGIAQGAYEAALKYAKERIQFGRPIAQQQAISFKLADM 395 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K+ E MA K + +A V+ +A++ GG+ Sbjct: 396 ATKLRCARFLIYSAA----EMKTNHENYGMESAMA---KMYASDIALEVVNDALQIHGGN 448 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 449 GYLKGMDVERMYRDAKITTIYEGT 472 >gi|300857084|ref|YP_003782068.1| putative acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM 13528] gi|300437199|gb|ADK16966.1| predicted acyl-CoA dehydrogenase [Clostridium ljungdahlii DSM 13528] Length = 380 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 36/278 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF 256 G LTE G+D A + +G + DG Y L+ K F+++ ++ F+ + + G Sbjct: 120 GFALTEPNAGSDPAGM--RGTAVKDGDEYILNATKTFITNGALASVFVGIFKTNPEAGNK 177 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302 + + D + G+ + ++K+G R + T ++ F N F L L Sbjct: 178 GISAFIVDANTLGITIGKHEDKMGLRLSNTTDVTFENVRVPASNMLGEEGSGFKLALNSL 237 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 N+S V A ++V M+ +L E++ YA+ R G +I ++++ +AD+ Sbjct: 238 NLSRAFV-----------ATLAVGIMQRALDESVKYAKERKQFGKPIIKFQMVQQMLADM 286 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A+ I A+ AL D +E A ITK + A V + A++ GG Sbjct: 287 AIKIEASRALVNNTMKLMDNGNLVRKEGA-------ITKAFVSDCAQEVTSNAVQIFGGY 339 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY +E + + R+ I G+ + + LEK Sbjct: 340 GYSKEYPVEKLMRDCKVFQIFEGANQIQRMTIAGALEK 377 >gi|260428167|ref|ZP_05782146.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45] gi|260422659|gb|EEX15910.1| acyl-CoA dehydrogenase domain protein [Citreicella sp. SE45] Length = 592 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 43/313 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 148 YLPKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTRAEPQEDGSYRITGSKI 194 Query: 234 FLSSPMSDAF-----IMLAQVEG------RVGCFLVPRLL--EDGSP---NGLCYQRLKN 277 ++S+ D ++LA++ G + F+VP+ L EDGSP N L L+ Sbjct: 195 WISAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFLVNEDGSPGARNSLSCGGLEK 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + + GFL+G+ + + M L + + V+ A+ Sbjct: 255 KMGIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGFAQGAVAYENALG 314 Query: 338 YARRRH----VSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 +AR R V+G + + P ++R + D A A + A D A Sbjct: 315 FARERQQGRAVTGTQMPEAPADTIMVHPDVRRNLMDQKSITEGARAFVYWGAMLIDMAHR 374 Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + A I + P+ K + A + +GGSG+ E + + R++ I Sbjct: 375 AEDPDAEGLISLLTPVIKGFLTDKGFETCVLAQQTLGGSGFTREWGLEQFVRDARITMIY 434 Query: 444 LGSGNAMVLDVLN 456 G+ LD++ Sbjct: 435 EGTNGIQSLDLVG 447 >gi|229020562|ref|ZP_04177304.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] gi|229026780|ref|ZP_04183112.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228734503|gb|EEL85165.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228740726|gb|EEL90982.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] Length = 379 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGTKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEECRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|167515960|ref|XP_001742321.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778945|gb|EDQ92559.1| predicted protein [Monosiga brevicollis MX1] Length = 409 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 24/269 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ ++ D + L+G K W + P SDA ++ A + + Sbjct: 151 LSEPGNGSDAGAASTTARREGD-QWILNGTKAWITNGPESDAVVVFATTNKELKHKGISA 209 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + D GL + ++K+G R++ T L F + +LG+ + KI + Sbjct: 210 FIVDKKTPGLSCGKKEDKLGIRASGTCNLIFEDCAIPAANILGEEGMG------FKIAMS 263 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ + +A+ A+ Y + R G L+ + +AD+A + +A Sbjct: 264 TLDGGRIGIAAQALGIAQAALDCAVAYGQERKSMGVPLVSHQAISMKLADMATRLESARL 323 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++R A DE K +EAA ++ A + A V +A++ +GG GY+ E Sbjct: 324 LTWRAAALKDEGKPFIKEAAMGKLAA-------SEAATFVSHQAIQILGGMGYVTEMPAE 376 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 RHYR++ I G+ L + L K Sbjct: 377 RHYRDARITEIYEGTSEIQRLVIAGQLVK 405 >gi|118477942|ref|YP_895093.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|118417167|gb|ABK85586.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] Length = 385 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 117 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 174 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 175 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 229 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 230 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 283 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 284 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 336 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 337 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 373 >gi|315047290|ref|XP_003173020.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] gi|311343406|gb|EFR02609.1| glutaryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] Length = 424 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 162 FGLTEPNHGSDPGSMETVARPHPTKTGYYSLSGTKTWITNSPISDAFLVWAKLDGKIRGF 221 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 ++ R D P G L +KNK R++ T ++ N + ++ GP Sbjct: 222 VIER---DQCPEGTLKTPAIKNKTALRASITGMIQMDNCPVPEANMFPEVTGLVGP---- 274 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 275 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 332 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T + ++A DE K+ E M + K C A A E GG+ + Sbjct: 333 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 385 Query: 427 ERSIARH 433 E I RH Sbjct: 386 EYHIGRH 392 >gi|288800850|ref|ZP_06406307.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332311|gb|EFC70792.1| acyl-CoA dehydrogenase family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 574 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 30/328 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + +G + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEEEGCWLLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + +++K+G + T EL + N L G + G ++ + L Sbjct: 231 RGLSMFIYDKRQGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + EA+ YA R ++D P + +A I + A +L Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEALAYAEERKQFDTAIVDMPAVYDMVARIKAKLDAGRSL 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ + D K+ ++E+ Y R+ PI K + +A Sbjct: 349 LYQTSRYVDIYKALDDIARERKLTPEEKAEQKKYTRLADAFTPIAKGMNSEYVNQNTYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469 ++ GGSG+I E R YR++ SI G+ V+ + + GT + + Sbjct: 409 IQVHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYASMIQEMLQNEV 468 Query: 470 STLEQDLGSSGKKVITILRDSISLCKED 497 S Q L K++ L ++I KED Sbjct: 469 SAEMQPLKDRVVKMVAKLEEAIEKVKED 496 >gi|160874881|ref|YP_001554197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS195] gi|160860403|gb|ABX48937.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195] gi|315267117|gb|ADT93970.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS678] Length = 596 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +S+G++ ++G K F+SS ++D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L + G+PN L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNGDGSLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA------AYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ ++ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A + GG GYI + + + R+S I G+ LD++ Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHDWGMEQFVRDSRIALIYEGTNGIQALDLVG 452 >gi|88704323|ref|ZP_01102037.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] gi|88701374|gb|EAQ98479.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] Length = 390 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 21/261 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 I LG+TE GG+D+A + + + D Y ++G K +++ M ++ A G G Sbjct: 133 ISLGITEPGGGSDVARLRTTAVRDGD-HYIVNGSKTYITGGMRANWVSTAVRTGGEGAGG 191 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 V LL G L K G ++ T L F N L+G+ N + I Sbjct: 192 VSMLLIPTDAPGFSRTALDRKQGWWASDTATLYFDNVRVPVENLIGEENRGF-----IVI 246 Query: 315 LIYLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +S M+++ RV L EA +AR R+ G L D V++ A + + A Sbjct: 247 MTNFNSERMAMAVSMEAQGRVCLEEAATWARERNTFGKRLADHQVIRHKFAQMKQKLNAT 306 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A S + + A ++ A T +C + EAM+ +GG+GY+ Sbjct: 307 QAYIRSCYESIENGNPNPGDIALLKVQASETLEFCAR-------EAMQILGGTGYMRGNR 359 Query: 430 IARHYRESPANSILLGSGNAM 450 + R YRE N+I GS M Sbjct: 360 VERIYREVRVNAIGGGSEEIM 380 >gi|327267682|ref|XP_003218628.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like [Anolis carolinensis] Length = 433 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 28/283 (9%) Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 ++ E P ++ + ++E G+D ++ ++ +K D Y ++G K W Sbjct: 153 VYGTEEQKMTYLPKMSRNLVGSVCISETGSGSDAFSLKTRAEKKGD-YYIINGSKMWISL 211 Query: 237 SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 + + F ++A G CF+V R E GL ++ +NK+G R+ +T + F Sbjct: 212 AEQAGVFFVMANANLSAGYKGITCFIVDRNTE-----GLHVEKKENKLGIRATSTCPVTF 266 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 N + + N+ + K I L++ + +S + LA+ I Y ++R+ Sbjct: 267 DNV---KVPESNIVGQFGKGYKYAIEMLNTGRIGISAQMLGLAQGCFDQTIPYIKQRNQF 323 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G + + M+ IA +A I AA L++ A + K +EA+ A KY+ Sbjct: 324 GKSIFEFQGMQHQIAHVATQIEAARLLTYNAARLAETGKPFIKEASMA-------KYYTA 376 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++A ++ +E +GG G+ ++ I ++YR+ +I G+ N Sbjct: 377 EVATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTSN 419 >gi|261880075|ref|ZP_06006502.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361] gi|270333229|gb|EFA44015.1| acyl-CoA dehydrogenase [Prevotella bergensis DSM 17361] Length = 573 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 27/309 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 F E P + + LTE G+D+ + + + DG + L+G K F+++ Sbjct: 152 FGSEEQKQKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNG 211 Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 SD ++LA+ E G + + D G+ + ++NK+G + T EL + N Sbjct: 212 DSDIHLVLARSEAGTKDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKAE 271 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ 352 L GD + G ++ ++ ++ A + ++ V LA +AI YA R G + Sbjct: 272 LCGDRRL--GLIK--YVMSLMNGARLGITAQSVGLAQEAYTQAIEYANARVQFGKKIAMF 327 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI--- 395 P + ++ + + A A+ ++ + D K+ R E Y+R+ Sbjct: 328 PAVYDMLSRMKAKLDAGRAILYQTSRYVDIYKTLEDISRERKLTPEERKEMKTYSRLADA 387 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P++K + A + + GGSG+I E R YR+ SI G+ V+ + Sbjct: 388 LTPLSKGMVSEYANQCAYDCISVHGGSGFIMEYKCQRLYRDVRIFSIYEGTTQLQVVAAM 447 Query: 456 NLLEKGTNL 464 + GT L Sbjct: 448 RYITNGTYL 456 >gi|281420471|ref|ZP_06251470.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205] gi|281405244|gb|EFB35924.1| acyl-CoA dehydrogenase family protein [Prevotella copri DSM 18205] Length = 567 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 31/340 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCF 256 + + LTE G+D+ + + + DG + L+G K F+++ SD ++LA+ EG Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNGDSDIHLVLARSEEGTKDGR 230 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + + D G+ + +++K+G + T EL + N+ L G N G ++ + L+ Sbjct: 231 GLSMFIYDKRDGGVTVRHIEHKLGIHGSPTCELVYKNSKAELCG--NTRLGLIKYVMALM 288 Query: 317 ---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A SV + + E + YA+ R G +I+ P + ++ + + A +L Sbjct: 289 NGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGEKIINFPAVYDMLSRMKAKLDAGRSLL 348 Query: 374 FRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEAM 416 + A D K+ R E Y R+ P+ K + A +A+ Sbjct: 349 YCCARYVDIYKALEDIARDTKLTPEERQEMKKYTRLADAFTPLAKGMNSEYANQNAYDAI 408 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF---EQLFSTLE 473 GGSG+I E R +R++ SI G+ V+ + + GT L E L S + Sbjct: 409 SIHGGSGFIMEYKCQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLESEVS 468 Query: 474 QDLGSSGKKV---ITILRDSISLCKE--DKGLARFLTEKI 508 +DL ++V + + +I+ KE D+ + FL ++ Sbjct: 469 EDLKPLKERVAKLVDLYEAAINKVKEANDQAIHDFLARRL 508 >gi|70732969|ref|YP_262742.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68347268|gb|AAY94874.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 592 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPRADGSYAISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + + G N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVNADGSLGERNPVTCGSIEHKMGIQASATCVMNFDQAIGYLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S AI YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGPQAKDKVADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R + ++ P+ K + + Sbjct: 346 DVRRMLLTMKAANEGGRAFSTYVAMQLDTAKFSEDPDTRKRAESLVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466 + GG GYI E + R+ I G+ LD++ G+ F Sbjct: 406 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465 Query: 467 QLFS 470 +LF+ Sbjct: 466 KLFA 469 >gi|328770164|gb|EGF80206.1| hypothetical protein BATDEDRAFT_35120 [Batrachochytrium dendrobatidis JAM81] Length = 424 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 33/272 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ + K +G Y ++G K W +S ++ F++ A V+ G C Sbjct: 168 LSEAGSGSDAFALQTSAVK-KNGKYIINGSKMWITNSYEAEIFLVFANVDPSQGYKGITC 226 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+V + + G+ + + K+G R+++T L F + +LG+ V G + Sbjct: 227 FIVEKDM------GVKVAKKEIKLGIRASSTCSLSFDDVEVPAENVLGE--VGKGYKYAI 278 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +IL + + ++ + LA+ A+ Y +R G + D M+ +A +A++I Sbjct: 279 EIL---NEGRIGIAAQMLGLAQGAFDNALPYMYQRKQFGQAIGDFQGMQFQVAQVAMEIE 335 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L++ A +E KS +EAA A++ + ++A ++A+E +GG G+ E Sbjct: 336 AARLLTYNAARLKEEGKSFVKEAAMAKL-------YASQVAEKSASKAIEWVGGVGFTRE 388 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 I + YR+ +I G+ N + + LL+ Sbjct: 389 FPIEKFYRDCKIGAIYEGTSNIQLQTIAKLLK 420 >gi|301791405|ref|XP_002930673.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like [Ailuropoda melanoleuca] Length = 478 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D+ ++ ++ K + Y ++G K W S+ + F+++A V +G C Sbjct: 222 LSEAGAGSDLFSLKTRADKKGN-YYVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITC 280 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E GL + +NK+G R+++T L F N + + N+ K Sbjct: 281 FLVDRDTE-----GLHIGKAENKMGIRASSTCPLTFENV---KIPEANILGQIGHGYKYA 332 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + D ++ +A +A+ + AA Sbjct: 333 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYMKERMQFGKRIFDFQGLQHQVAHVAIQLEAA 392 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ +E +GG GY ++ Sbjct: 393 RLLTYNSARLLEAGQPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 445 Query: 430 IARHYRESPANSILLGSGN 448 + +++R++ +I G+ N Sbjct: 446 VEKYFRDAKVGTIYEGASN 464 >gi|158314832|ref|YP_001507340.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158110237|gb|ABW12434.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 619 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 88/375 (23%), Positives = 170/375 (45%), Gaps = 62/375 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S P + ++LA+ EG Sbjct: 174 LTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGT 233 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ L D G+ NG L+ K+G + + T EL F G+L+GD Sbjct: 234 KGLSMFVVPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGD 293 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349 V G + +++ Y + +++ + A+ +AR R + G L Sbjct: 294 --VHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAFARER-IQGADLTRASDKTAPR 350 Query: 350 ---IDQPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399 I+ P ++R + AL +F+ A + A+ ++ A ++ PI Sbjct: 351 VAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI 410 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + ++A +++ +GGSGY+++ I ++ R++ +++ G+ + D+ Sbjct: 411 VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 470 Query: 457 LLEKG---TNLFEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKG-LARFLTEKI 508 + +KG T LF Q+ ++ G +G + R+S+ C+ G + FLT Sbjct: 471 VRDKGRALTTLFTQVQEFVK---GEAGNGALRAERESLGAALDECQAMVGSMVGFLT--- 524 Query: 509 ALASSAAALYRAGMN 523 A A + +YR G+N Sbjct: 525 ATAQDKSQVYRVGLN 539 >gi|72383895|ref|YP_293249.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72123238|gb|AAZ65392.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 598 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/351 (21%), Positives = 157/351 (44%), Gaps = 43/351 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ +DG + ++G K F+S D ++LA++ Sbjct: 172 LTEPHCGTDLGLLRTRAVPNADGTFGITGTKIFISGGEHDFTDNIVHLVLARLPDSPPGV 231 Query: 253 --VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ L SP G +R L++K+G +NAT + F G+L+G+ + Sbjct: 232 RGISLFLVPKFLV--SPEGDLAERNAVTCGSLEHKMGIHANATCTMNFDGATGYLVGEPD 289 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGILIDQ 352 + M L + ++ M + +A+ YA+ R + +I+ Sbjct: 290 KGLAAMFVMMNHARLLVGVNAIGLMEAAYQKALGYAKDRTQGRSPTASARNSPADPIIEH 349 Query: 353 PVMKRAIADIALDIAAATALS---FRLANS---FDEAKSRSEEAAYARIMAPITKYWCCK 406 ++R + I A + +LA++ ++++ R A + ++ PI K + Sbjct: 350 ADVRRMLLTQKAYIEGTRAFAQWACQLADTQHFGNDSEIRHHAAELSALVTPIVKAFSSD 409 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463 +A + AM+ +GG GYI + + +H R++ + G+ +D+L L ++GT Sbjct: 410 LAVECTSLAMQVLGGHGYIVDNQVEQHLRDARIIPLYEGANGIQAMDLLGRKVLPDQGTR 469 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA 514 L E + + + +G++ +LR+ + + R T ++++ + A Sbjct: 470 L-EMFLAIVNEFIGANAGN--PVLREFTAPLSSATDVLRNATHEVSMQAKA 517 >gi|158318988|ref|YP_001511496.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158114393|gb|ABW16590.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 609 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 88/375 (23%), Positives = 170/375 (45%), Gaps = 62/375 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S P + ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ L D G+ NG L+ K+G + + T EL F G+L+GD Sbjct: 224 KGLSMFVVPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349 V G + +++ Y + +++ + A+ +AR R + G L Sbjct: 284 --VHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAFARER-IQGADLTRASDKTAPR 340 Query: 350 ---IDQPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399 I+ P ++R + AL +F+ A + A+ ++ A ++ PI Sbjct: 341 VAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + ++A +++ +GGSGY+++ I ++ R++ +++ G+ + D+ Sbjct: 401 VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKI 460 Query: 457 LLEKG---TNLFEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKG-LARFLTEKI 508 + +KG T LF Q+ ++ G +G + R+S+ C+ G + FLT Sbjct: 461 VRDKGRALTTLFTQVQEFVK---GEAGNGALRAERESLGAALDECQAMVGSMVGFLT--- 514 Query: 509 ALASSAAALYRAGMN 523 A A + +YR G+N Sbjct: 515 ATAQDKSQVYRVGLN 529 >gi|326564972|gb|EGE15173.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 12P80B1] Length = 606 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 58/347 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ S+ ++ + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L E N + +++K+G S+AT + F GFL+G+ N + Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355 + + I ++ + +S ++ YA+ R +SG +QP + Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409 ++A A+ A + TA R A+ EA ++ +E A + PI K + +++ Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGFFTPILKGFLTELSI 409 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI+E + R++ ++ G+ LD+L Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456 >gi|313205892|ref|YP_004045069.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|312445208|gb|ADQ81563.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|315022204|gb|EFT35232.1| Acyl-CoA dehydrogenase, short-chain specific [Riemerella anatipestifer RA-YM] gi|325336668|gb|ADZ12942.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD] Length = 376 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 37/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W PK+ S + V GLTE G+D + + K D + ++G Sbjct: 105 KKWLPKLASGQ-------------VIGAWGLTEHNTGSDAGGMNTTAVKDGDE-WVINGA 150 Query: 232 KWFLSSPMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F++ +S A +M E +LE G P G + +NK+G R++ T EL Sbjct: 151 KNFITHAISGDIAVVMTRTGEKNTSNNATAFVLEKGMP-GFSSGKKENKLGMRASETAEL 209 Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341 F N LG V G + +KIL D +S++ + + +A+ A+ YA+ Sbjct: 210 IFDNVRVPDSHRLG--QVGEGFKQALKIL---DGGRISIAALSLGIAKGAYKAALKYAKE 264 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 RH G + + + +AD+A +I AA L R A + + + E A A++ A Sbjct: 265 RHQFGQAIANFQAINFMLADMATEIDAAELLIQRAATLKNAKQKMTREGAMAKLYASEA- 323 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 C +++ A++ GG GY ++ ++YR+S +I G+ Sbjct: 324 --CVRISN----NALQIFGGYGYTKDFPAEKYYRDSKLCTIGEGT 362 >gi|229181590|ref|ZP_04308915.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] gi|228601786|gb|EEK59282.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] Length = 379 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYVLNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + G + ++K+G RS+ T E+ F + + N+ G Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K+ + LD ++ V +A+ ++ YAR RH G + Q + +AD+ Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ AA L+++ A E +E+A +++ A A V EA++ GG Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY ++ + R+ R++ I G+ L + +L K Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|34497221|ref|NP_901436.1| isovaleryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34103077|gb|AAQ59440.1| probable isovaleryl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 389 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 15/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K +DG Y L+G K W + +D ++ A+ + G + Sbjct: 127 LAMSEPNAGSDVVSMKLRADK-TDGGYLLNGSKMWITNGGDADTLVVYAKTDVNAGPKGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316 + + S G + +K+G R + T + F N F + D NV G +K+L+ Sbjct: 186 TAFIIEKSFAGFSHGSKLDKLGMRGSNTYPIFFDNCF---VPDENVLGGEGNGVKVLMSG 242 Query: 317 --YLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y S + + + M+ SL + Y R G + D +M+ +AD+ + ++A+ A Sbjct: 243 LDYERSVLAAGPLGIMQASLDIVVPYLNERSQFGQPIGDFQLMQGKLADMYVKLSASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + + D R E R A + + A + +A++C+GG+GYI E + R Sbjct: 303 VYAVGQALD----RGETGRQTRKDAAGAILYAAENATQLALDAIQCLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|254237268|ref|ZP_04930591.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719] gi|126169199|gb|EAZ54710.1| hypothetical protein PACG_03332 [Pseudomonas aeruginosa C3719] Length = 598 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ +DG + +SG K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L D G+ N + +++K+G +++AT + F G+L+G+ N Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354 + M L + + + S A+ YAR R ++G D+P Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343 Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + AL++ A D +A R A + PI K + + Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458 V M+ GG GYI E + + R+ I G+ LD+L LL Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463 Query: 459 EKGTNLFEQL 468 T L QL Sbjct: 464 RGFTKLVHQL 473 >gi|295687743|ref|YP_003591436.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295429646|gb|ADG08818.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC 21756] Length = 585 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 62/353 (17%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE + G+D+AA+T+ +G + ++G K ++ Sbjct: 148 PKLVSGEWTGT-------------MNLTEPQAGSDLAALTTMATPDGEGGWRITGQKIYI 194 Query: 236 SSPMSDA-----FIMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278 + DA ++LA+ V+G V FL P++L +DG NGL L++K Sbjct: 195 TWGDHDAADNIVHLVLARTPDAPPGVKG-VSLFLAPKVLVGDDGKLGEANGLRVGGLEHK 253 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334 +G + T + F L+G L + +++A + V ++AE Sbjct: 254 LGIHGSPTCVMLFEGAKAELVGGLGQGL-----PNMFTMMNAARLQVGTQGTAIAERAYQ 308 Query: 335 -AIHYARRRHV-----SGGI---LIDQPVMKRAIADIALDIAAA------TALSFRLANS 379 A+ +++ R +G L D P ++R++ + I AA TA++ LA + Sbjct: 309 QALAFSQERAQGRSAWTGAYPSRLFDHPDVRRSLVLMKAHIEAARGICLSTAVAADLARA 368 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + +R+ ++ PI K W + V ++ ++ GG G+IEE A+HYR++ Sbjct: 369 AADETTRTSAKLREELLTPIAKAWSTDVGVWVASQGVQIHGGMGFIEETGAAQHYRDARI 428 Query: 440 NSILLGSGNAMVLDVLNL---LEKG---TNLFEQLFSTLEQDLGSSGKKVITI 486 I G+ +D++ L +G +L + + T+E DL SS K + + Sbjct: 429 APIYEGTNGIQAIDLVGRKLSLGEGQAVADLMDDIRDTIE-DLKSSDLKAVGL 480 >gi|229161448|ref|ZP_04289429.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803] gi|228621985|gb|EEK78830.1| Butyryl-CoA dehydrogenase [Bacillus cereus R309803] Length = 371 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 160 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 161 INGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359 >gi|254237267|ref|ZP_04930590.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719] gi|254243601|ref|ZP_04936923.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192] gi|126169198|gb|EAZ54709.1| hypothetical protein PACG_03331 [Pseudomonas aeruginosa C3719] gi|126196979|gb|EAZ61042.1| hypothetical protein PA2G_04424 [Pseudomonas aeruginosa 2192] Length = 592 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP++L + G N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG G+I E + R+ I G+ LD++ Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454 >gi|302866634|ref|YP_003835271.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302569493|gb|ADL45695.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 377 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 66/309 (21%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT + W P S E + + ++E G+D+A IT+ + D Sbjct: 102 LTTEEQKQRWLPGFCSGE-------------IVTAIAMSEPGAGSDLAGITTTAVRDGDD 148 Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKN--K 278 + L+G K F+S+ ++D +++A+ + GR G L+ ++E G P ++R +N K Sbjct: 149 -WVLNGQKTFISNGILADLVVVVARTDPGAGRRGISLL--VVERGMPG---FERGRNLDK 202 Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 +G ++ T EL FS+ F +L+ +L P+E + I A+ + Sbjct: 203 LGQKAQDTAELFFSDVRVPAANLLGAEGEGFAYLMRNL-----PLERLSI------AVAA 251 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD--IAAATALSFRLANSF-D 381 ++G A+ + Y R+R G R I + + A A RL F D Sbjct: 252 LAGAETVFAQTLDYCRQRQAFG----------RPIGSFQHNRFVLAELATELRLGRVFVD 301 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A MA K+WC ++ V+ ++ GG GY+ E +AR Y ++ + Sbjct: 302 NCLVAPDLTAETAAMA---KWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLDARVQT 358 Query: 442 ILLGSGNAM 450 I G+ M Sbjct: 359 IYGGTTEIM 367 >gi|256028604|ref|ZP_05442438.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D11] gi|289766521|ref|ZP_06525899.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11] gi|289718076|gb|EFD82088.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11] Length = 377 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 27/280 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS 236 F E N T IG GLTE G+D A T+ + DG Y L+G K F++ Sbjct: 99 FGTETQKQNYLKPLATGEKIGCFGLTEPGAGSDAGASTTTA--VLDGDYYILNGRKCFIT 156 Query: 237 -SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +P++D I+ A + G + + D + G +NK+G R + T ++ N Sbjct: 157 NAPIADFAIISAMTDRTKGTKGISTFIVDSTLEGWSVGAHENKMGIRGSITSDIVLDNVK 216 Query: 296 ---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSG 346 LLGD + KI++ LD+ + V+ + +A EAI Y + R G Sbjct: 217 VPKENLLGDKG------KGFKIMLNTLDAGRIGVAAQALGIAQGALDEAIKYVKERVQFG 270 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L + IA++A + AA L + A DE K+ + + + KY+ + Sbjct: 271 RKLAAFQNTQFKIAEMATKVEAARLLVYDAAKIKDEGKNPG-------LKSSMAKYYAAE 323 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V A++ GG GYI++ I R YR++ SI G+ Sbjct: 324 IANEVAYWALQLHGGYGYIKDYPIERIYRDARITSIYEGT 363 >gi|254524761|ref|ZP_05136816.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] gi|219722352|gb|EED40877.1| isovaleryl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] Length = 387 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMEAGAKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G RS+ T EL F N G + G + V ++ Sbjct: 187 TAFLVEKGMKGFSTAQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ + + M V + Y RH G + +++ IAD+ + + A A Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D+ ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355 Query: 432 RHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 356 RLWRDAKLYEIGAGT 370 >gi|146305420|ref|YP_001185885.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145573621|gb|ABP83153.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 596 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------V 249 LTE + GTD+A + ++ + +DG Y +SG K F+S D ++LA+ V Sbjct: 162 LTEPQAGTDLALLRTRAEPQADGSYKVSGSKIFISGGEQDLSENIVHLVLARLPDAPAGV 221 Query: 250 EGRVGCFLVPRLLE--DGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + LVP+ + DG+P N L +++K+G + +T + F G+L+G+ N Sbjct: 222 KG-ISLLLVPKFIAAADGTPGERNTLSCGAIEHKMGIKGASTCVMNFDGATGWLVGEANQ 280 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQ 352 + M + + + A+ YAR R S G+ +I Sbjct: 281 GLACMFTMMNDARFQVGLQGLGIGEAAFQGALRYARERLQSRGLAGVQAPDKAADPIIVH 340 Query: 353 PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 P ++R + + + +AA TA L + + A +R A ++ PI K + Sbjct: 341 PDVRRMLLTQKTLVEGSRMLAAYTARQLDLEHGAESADARKAAGKRAALLIPIVKAFFTD 400 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M V + ++ GG G+I E + + R+S + G+ LD + Sbjct: 401 MGQEVASHGVQVYGGHGFIREWGMEQLMRDSRITQLYEGTNGIQALDYI 449 >gi|332528789|ref|ZP_08404766.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC 19624] gi|332041855|gb|EGI78204.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC 19624] Length = 602 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 163/346 (47%), Gaps = 69/346 (19%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDELKAIYLEKLVSGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSD--AFIMLAQVEGR------VGCFLV 258 D+A + S+ + DG Y + G K F++ M+D A ++LA+V G + FLV Sbjct: 171 DLALVRSRAEPQPDGSYKVYGTKIFITYGEHDMADNIAHLVLARVTGAPEGIKGISLFLV 230 Query: 259 PRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--- 308 P+ L + P+G +R +++K+G +++ T L++ + ++ + STGP Sbjct: 231 PKFLVN--PDGSLGKRNDVQCVSIEHKMGIKASPTAVLQYGDG---MVASIASSTGPGAV 285 Query: 309 ----------VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYAR----RRHVSGGI--- 348 +E M I++ + V G+ V+ +A+ YA+ R V G I Sbjct: 286 GYLVGQENRGLEYMFIMMNAARYAVGVQGIAVAERAYQQAVAYAKDRVQSRPVDGSIKAS 345 Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I P ++R A+ + +A+ A ++ A+ +A++R + + + P+ Sbjct: 346 AAIIHHPDVRRMLMTSRALIEGCRAMASVAAAAYDAAHHHTDAEARKQNQTFYEFLVPLV 405 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A+HYR++ +I G+ Sbjct: 406 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQHYRDAKILTIYEGT 451 >gi|15595704|ref|NP_249198.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107099493|ref|ZP_01363411.1| hypothetical protein PaerPA_01000505 [Pseudomonas aeruginosa PACS2] gi|218889248|ref|YP_002438112.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254243600|ref|ZP_04936922.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192] gi|9946371|gb|AAG03896.1|AE004487_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126196978|gb|EAZ61041.1| hypothetical protein PA2G_04423 [Pseudomonas aeruginosa 2192] gi|218769471|emb|CAW25231.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 598 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ +DG + +SG K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L D G+ N + +++K+G +++AT + F G+L+G+ N Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354 + M L + + + S A+ YAR R ++G D+P Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343 Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + AL++ A D +A R A + PI K + + Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458 V M+ GG GYI E + + R+ I G+ LD+L LL Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463 Query: 459 EKGTNLFEQL 468 T L QL Sbjct: 464 RGFTKLVHQL 473 >gi|319764486|ref|YP_004128423.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330826702|ref|YP_004390005.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317119047|gb|ADV01536.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329312074|gb|AEB86489.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 376 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D +A+ + K DG Y ++G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAAKDGDG-YVINGVKQFITSGKNGQVAIVIAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296 G+ G FLVP G RL++K+G S+ T ++ F N G Sbjct: 170 TDKGAGKKGMSAFLVPT-----DTPGYVVARLEDKLGQHSSDTAQINFDGCRIPAENLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ G +E +I I A SV R + A+ YA+ R G + + + Sbjct: 225 AEGEGYKIALGALEGGRIGI----AAQSVGMARSAFEFAVQYAKERESFGQPIFNHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD A I AA L + A+ D + +EAA A++ A +MA V + A+ Sbjct: 281 FRLADCATQIEAARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG G + + + R YR+ I G+ + Sbjct: 334 QTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365 >gi|296282193|ref|ZP_06860191.1| isovaleryl-CoA dehydrogenase [Citromicrobium bathyomarinum JL354] Length = 399 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 16/253 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + DG Y L+G K W ++P +D ++ A+ + G + Sbjct: 140 LAMSEASAGSDVVSMKLKADAV-DGGYRLNGTKFWITNAPYADTLVVYAKTDSEAGSRGI 198 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 L + G + K+G R + T EL F + F + D + ++ L Sbjct: 199 TAFLIEKGDEGFSIGQKIEKVGMRGSPTAELVFDDCF--VPEDRVMGPVGGGVGVLMSGL 256 Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D + ++G+++ + +A I Y R R G + +M+ +AD+ + + +A A + Sbjct: 257 DYERVVLAGLQLGIMQACLDTVIPYLRERTQFGKPIGSFQLMQAKVADMYVALQSARAYT 316 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A S D K+ +AA A ++A + A V AE+++ +GG+GY + + R+ Sbjct: 317 YAVAKSCDANKTTRFDAAGAILLA-------SENAFRVAAESVQALGGAGYTLDWPVERY 369 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 370 MRDAKLLDIGAGT 382 >gi|330956960|gb|EGH57220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 601 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKR---- 357 L +A+ ++ ++ + YAR R + +I P ++R Sbjct: 293 NTARLGTALQGLAHAEIAFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 358 --AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 A A+ + TA + D+A+ + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSDDAEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTRIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G+ G + + ++ ++ G LT K+ +A+ Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGE---LTMKVGMAA 509 >gi|313204175|ref|YP_004042832.1| acyL-CoA dehydrogenase domaiN-containing protein [Paludibacter propionicigenes WB4] gi|312443491|gb|ADQ79847.1| acyl-CoA dehydrogenase domain-containing protein [Paludibacter propionicigenes WB4] Length = 570 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 139/293 (47%), Gaps = 35/293 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRV 253 + LTE G+D+ A+ + +DG++ L+G K F+++ + ++LA+ E GR Sbjct: 172 MDLTEPDAGSDLQAVQLKATYNENDGLWYLNGVKRFITNGDAQIKLVLARSEEGTSDGRG 231 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 + V E+ N + +R++NK+G + + T EL F+NT L+G + G ++ Sbjct: 232 LSYFVA---ENKHDNTVLVRRIENKLGIKGSPTCELVFNNTPAKLVGTRRL--GLIK--Y 284 Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ ++ A + + V L+ EA+ YAR R G +I+ P + ++ I + A Sbjct: 285 VMSLMNGARLGIGAQSVGLSAAAYNEALAYARDRRQFGKAIIEFPAVFEMVSIIKAKLDA 344 Query: 369 ATALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAV 411 + AL + D EA +++ Y+++ + P+ K + + A Sbjct: 345 SRALLYETTRFVDIYKAYEAIENERKLEADEKADYKEYSKLADALTPMLKMFTSEYANQN 404 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++++ + R +R++ +I G+ V+ + + G L Sbjct: 405 AYDCIQVHGGSGFMKDYACERLFRDARIMTIYEGTSQLQVVAAIRHVTTGNYL 457 >gi|312135048|ref|YP_004002386.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775099|gb|ADQ04586.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor owensensis OL] Length = 381 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 24/280 (8%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + +D +++ A + G + + + G + ++K+G R+++T EL F + Sbjct: 158 NGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYCGKKEDKMGIRASSTTELIFEDCK 217 Query: 296 GF---LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 LLG TG + MK D V+ M V +A+ AI YA+ R G Sbjct: 218 VHKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKERVQFGQ 272 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCK 406 L ++ +AD+ ++I AA A+ + D AK S+E++ ++ A Sbjct: 273 PLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS-------D 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 326 VAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|322419601|ref|YP_004198824.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] gi|320125988|gb|ADW13548.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] Length = 380 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 47/282 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGC 255 LTE G+D A I ++ DG + L G K+F+S+ A +++ A+ G + Sbjct: 124 LTEPEAGSDAAGIKTRA-IYDDGRWRLEGTKYFISNGSRAAVLVVMALTDPAKGGGGISA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG---DLNVSTGPVED- 311 F+VP G GL + +K+G RS+ TV L FL G G +D Sbjct: 183 FIVP-----GEAEGLEKGKNLDKLGYRSSDTVAL-------FLKGVRLHEEALVGARDDG 230 Query: 312 ----MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M++L + A M++ R L +++ Y R+RH G + D ++ +AD+A + Sbjct: 231 FRQAMQVLAAGRIGLAAMAIGIGRACLEQSLVYLRKRHAFGHPIADFQALQWMVADMATE 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGS 422 I AA L+ R A D EA+ A++ A + AV+ A++ + GG+ Sbjct: 291 IDAARLLTLRAARLKDRGMPFGREASMAKLYA----------SEAVMRAALKAVQIHGGN 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKG 461 GY + R++RE+ I G G + V +L +LL++G Sbjct: 341 GYTRAFPVERYFREAKLCEI--GEGTSEVQRLLIARSLLKEG 380 >gi|209966788|ref|YP_002299703.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] gi|209960254|gb|ACJ00891.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] Length = 396 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 55/329 (16%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + + + RE+ P PM LG++E G+D+A++ + +K D Sbjct: 93 MATPALAR-FGSDELRREFLP----PMIAGDQVWCLGVSEPGAGSDVASVKTTARKDGDD 147 Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-------------GLC 271 G W S +D +LA DG+P+ G+ Sbjct: 148 YVINGGKMWTTSGTQADVMCLLANTS-------------DGAPHKNKSLIVLPMKTKGVT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG- 327 R +K+G R + T ++ F + +L+G+ + ++L + + + +G Sbjct: 195 VARKLDKLGMRCSDTAQIHFEDVRVPRRYLIGEEGMGF----TYQMLQFQEERMWGAAGS 250 Query: 328 ---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 M + + + + Y R R G LID + +A++ ++ A AL++R +F K Sbjct: 251 LRSMDIMIDDVVAYTRNRIAFGKPLIDNQYIHFRLAELKAEVEALRALTYRAVETFINGK 310 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A ++A + K ++ V ++ GG GY+ E I+R++R+S SI Sbjct: 311 D-------ATMLASMAKLKSGRLLREVADGCLQYYGGMGYMNEMPISRYFRDSRLTSIGG 363 Query: 445 GSGNAMV------LDVLNLLEKGTNLFEQ 467 G+ M+ + L + GT+ EQ Sbjct: 364 GADEVMLSIICKYMGTLPKVRFGTDAPEQ 392 >gi|218780484|ref|YP_002431802.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761868|gb|ACL04334.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 601 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 49/308 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A+T+ K DG Y +SG K F+++ +++ + +LA+VEG Sbjct: 164 LTEPEAGSDVGALTTTAVKNEDGTYSISGAKIFITNGEHQLTENIVHPVLARVEGAPEGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F+VP+ EDGS N + ++ K+G +AT L G LLG Sbjct: 224 KGISIFIVPKYWVNEDGSMGDFNDVVCTGVEEKMGIHGSATCSLTLGGAGKCRGLLLGQ- 282 Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG----- 347 E MKI+ + ++ A ++V + A A +YA+ R ++ G Sbjct: 283 -----ECEGMKIMFHMMNDARLNVGFQAFTYASSAYLYACNYAKERIQGKDLTAGKNSPS 337 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPIT 400 +I+ P ++R + + + + + A+ FD +A+ S++A + P+ Sbjct: 338 VTIINHPDIRRMLTWMKAHVDGMRSFIYYTASLFDWMKAEPDSDQAQNRQDLIDFFIPLV 397 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458 K + + + V AM+ GG GY +E I + R+ SI G+ +D+L L Sbjct: 398 KGYSAQRSFDVCVNAMQVYGGYGYTKEYPIEQLLRDCKITSIYEGTDGIQAMDLLGRKLQ 457 Query: 459 EKGTNLFE 466 +G LF+ Sbjct: 458 MRGGALFQ 465 >gi|312127705|ref|YP_003992579.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777724|gb|ADQ07210.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 381 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 34/285 (11%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKKKYLPKIAKGELIAAFALTESDAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + +D +++ A + G PR ++E G C ++ ++K+G R+++T EL Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 212 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 F + LLG TG + MK D V+ M V +A+ AI YA+ R Sbjct: 213 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEYAIRYAKER 267 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401 G L ++ +AD+ ++I AA A+ + D AK S+E++ ++ A Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 324 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 325 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|304394048|ref|ZP_07375971.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp. R2A130] gi|303293488|gb|EFL87865.1| acyl-CoA dehydrogenase domain-containing protein [Ahrensia sp. R2A130] Length = 602 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/359 (22%), Positives = 150/359 (41%), Gaps = 51/359 (14%) Query: 152 MSPSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + AL+ + + + PK+ S E+ T + LTE GT Sbjct: 130 MYPGLTAGAAAALVEHASEEQKQAYVPKMLSGEWSGT-------------MNLTEPHCGT 176 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ + ++ + DG + ++G K ++S+ D +++A++EG + F+ Sbjct: 177 DLGMLRTKAARNDDGSFAITGQKIWISAGEHDMSSNIIHLVIARIEGEPEGTKGISLFVC 236 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + EDG+P N L L++K+G NAT + + FL+G+ N + M Sbjct: 237 PKYILDEDGNPGERNKLSCGSLEHKMGINGNATCVMNYEGAKAFLVGEENKGLAAMFVMM 296 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------PVMKRAIAD 361 L A+ ++ V+ A +AR R ++G DQ P ++R + Sbjct: 297 NEARLGVAVQGLAQSEVAYQNAADWARDRVQGRALTGAKYPDQKADPIIVHPDIRRVLLT 356 Query: 362 I------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 I A + TAL L++ D+ + ++ P+ K A Sbjct: 357 IRSFNEAARALVLWTALKGDLSHRSDDEDEKQNADDIMGLLTPVLKGVLTDKGFDNTVMA 416 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 + GG+GY +++ + + R++ I G+ LD++ L KG + F + Sbjct: 417 QQVFGGTGYTKDQGVEQFVRDARIAMIYEGANGIQALDLVGRKLPSKGGRAVQAYFKEV 475 >gi|291295512|ref|YP_003506910.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber DSM 1279] gi|290470471|gb|ADD27890.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279] Length = 373 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 27/266 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + LTE G+D A++ QK+ G + L+G K W S + ++++A+ Sbjct: 112 PLARGEWIGAFSLTEPHAGSDPASLKLSAQKVPGG-WELNGLKSWVTSGGQAQVYVVMAR 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 E + F+V E +P GL + + K+G + T EL F F LLG Sbjct: 171 SEAGISSFIV----EKDTP-GLSFGSPEEKMGLHAAHTCELRFEGVFVPEENLLGQEGRG 225 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIA 360 + L LDS + ++ V +A A YA R G + + + +A Sbjct: 226 LA-----QALAGLDSGRIGIAAQAVGMARAAFEIAKQYADERTQFGQKIREFQGVGFKLA 280 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ IAAA AL A D ++ + EA+ A++ A +A V EA++ +G Sbjct: 281 EMHTRIAAARALVLEAAAKKDRSEKYTLEASTAKLFA-------SDVAVNVTREAVQVLG 333 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY E + R+YR++ I G+ Sbjct: 334 GYGYHREYRVERYYRDAKITEIYEGT 359 >gi|91224762|ref|ZP_01260022.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] gi|91190308|gb|EAS76577.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] Length = 384 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 + RH+R+ + IL G+ M L V LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384 >gi|15595705|ref|NP_249199.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107099494|ref|ZP_01363412.1| hypothetical protein PaerPA_01000506 [Pseudomonas aeruginosa PACS2] gi|218889249|ref|YP_002438113.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|9946373|gb|AAG03897.1|AE004488_1 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|218769472|emb|CAW25232.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 592 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP++L + G N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG G+I E + R+ I G+ LD++ Sbjct: 406 GLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454 >gi|116054233|ref|YP_788677.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115589454|gb|ABJ15469.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 598 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 43/310 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ +DG + +SG K F+S+ D ++LA++ Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGT 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L D G+ N + +++K+G +++AT + F G+L+G+ N Sbjct: 224 KGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------- 354 + M L + + + S A+ YAR R ++G D+P Sbjct: 284 LHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVHP 343 Query: 355 -MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + AL++ A D +A R A + PI K + + Sbjct: 344 DVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------LL 458 V M+ GG GYI E + + R+ I G+ LD+L LL Sbjct: 404 GQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLL 463 Query: 459 EKGTNLFEQL 468 T L QL Sbjct: 464 RGFTKLVHQL 473 >gi|158522511|ref|YP_001530381.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511337|gb|ABW68304.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 380 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 23/278 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 PM + LTE G+D A+T + D Y ++G K F++S + ++L Sbjct: 113 PMAAGAFIGAFALTEPEAGSDPQAMTCTAVRDGDH-YIINGTKRFITSGKNGGVVILLAR 171 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 G + L G R+++K+G ++ TV+L F++ +LG S Sbjct: 172 TAEKGSRGISAFLVTHDFAGFSVGRIEDKMGQCASDTVDLLFNDCRVPASRMLG----SE 227 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360 G E KI + LD+ + ++ + + +A E+I Y+R R G L ++ IA Sbjct: 228 G--EGFKIAMSGLDAGRIGIASLSLGIAQAALDESIRYSRNRKQFGQNLSGFQGLRWMIA 285 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+D+ AA L A K E A MA K + +MA V +A++ G Sbjct: 286 DMAMDVEAARLLVLNAA----AVKEHGENCTAAASMA---KCYASEMAQRVTGQAIQIHG 338 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 G GYI+E + R YR++ +I G+ + + N L Sbjct: 339 GYGYIKEYPVERFYRDARITTIYEGTNQIQRIVIANEL 376 >gi|91789001|ref|YP_549953.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91698226|gb|ABE45055.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 596 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 139/286 (48%), Gaps = 44/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L EDGS N + +++K+G +++ T L++ + G+++G Sbjct: 221 GVKGISLFVVPKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGI--- 348 + N +E M I +++A +V +++AE A+ +AR R V G I Sbjct: 281 EENRG---LEYM--FIMMNAARYAVGMQGIAVAERAYQKAVSFARERVQSRPVDGSIKAS 335 Query: 349 --LIDQPVMKRAIADIALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I P +KR + + I A ++ ++ +A+ R + A+ M P+ Sbjct: 336 APIIHHPDVKRMLMTMRAYIEGCRAMASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A++ R++ +I G+ Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYMRDAKILTIYEGT 441 >gi|149927974|ref|ZP_01916223.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105] gi|149823270|gb|EDM82504.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105] Length = 380 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 19/270 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + I L +TE GG+D+A + ++ D Y +SG K +++S + + +A Sbjct: 115 PVLRGEKIIALAVTEPGGGSDVANLKTRAVDCGDH-YKVSGSKTYITSGIRADYYTVAVR 173 Query: 250 EGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G G + LL E G P Q LK K+G + T EL F N + + G Sbjct: 174 TGGDGYGGISMLLMEKGMPGFTTGQPLK-KMGWWCSDTAELFFDNVVVPKSNLIGIENGG 232 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 M I+ ++ + ++ +L+E A++YA+ R G L V++ +AD+A Sbjct: 233 F--MMIMTNFEAERLGLACYANTLSELAFNEALNYAKNRSTFGKPLSKHQVIRHKLADMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A+ ++R+A K +E + A K + K + + EA++ GG G Sbjct: 291 TQLEASREFTYRVAARMQAGKPALKEVSMA-------KNFATKTSDFITYEAVQIFGGMG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLD 453 ++ E + R YR++ SI G G +++ Sbjct: 344 FMRESLVERLYRDNRIASI--GGGTYEIMN 371 >gi|228955589|ref|ZP_04117590.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804092|gb|EEM50710.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 379 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + G + ++K+G RS+ T E+ F + + N+ G Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K+ + LD ++ V +A+ ++ YAR RH G + Q + +AD+ Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ AA L+++ A E +E+A +++ A A V EA++ GG Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY ++ + R+ R++ I G+ L + +L K Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|149243125|pdb|2PG0|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From Geobacillus Kaustophilus gi|149243126|pdb|2PG0|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From Geobacillus Kaustophilus Length = 385 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 43/303 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK + E + + +TE G+D+A I++ K Sbjct: 102 IASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAGSDLANISTTAVKD 148 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270 D Y ++G K F+++ + I++A C P+ ++E +P G Sbjct: 149 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPQAKPPHRGISLLVVERDTP-GF 199 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 R K+G + T EL F + LLG+ + + L AI + + Sbjct: 200 TRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 259 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 V + Y ++R G + + ++ +A++A +IA R+ K Sbjct: 260 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIV 319 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + A K+W +MA V AEAM+ GG GY+EE IAR YR+ P ++I G+ Sbjct: 320 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 372 Query: 448 NAM 450 M Sbjct: 373 EMM 375 >gi|296112458|ref|YP_003626396.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4] gi|295920152|gb|ADG60503.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis RH4] gi|326561590|gb|EGE11929.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 7169] gi|326562046|gb|EGE12375.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 46P47B1] gi|326565329|gb|EGE15508.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 103P14B1] gi|326570570|gb|EGE20608.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC1] gi|326570729|gb|EGE20755.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis BC8] gi|326573566|gb|EGE23528.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis CO72] gi|326577351|gb|EGE27237.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis 101P30B1] gi|326577837|gb|EGE27704.1| putative acyl-CoA dehydrogenase FadE [Moraxella catarrhalis O35E] Length = 606 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 58/347 (16%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ S+ ++ + + PK+ S E+ T + LTE + GT Sbjct: 126 MYPGLTTGSINTILQYGDDEQKSVYLPKLISGEWSGT-------------MCLTEAQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLNQMKTRAVPNADGSYAITGSKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L E N + +++K+G S+AT + F GFL+G+ N + Sbjct: 233 PKFLPNADGEADKRNAVACGSIEHKMGITSSATCVINFDGATGFLIGEANKGLKAMFTYM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQP--------------VM 355 + + I ++ + +S ++ YA+ R +SG +QP + Sbjct: 293 NTARIGTGIQGLAHIELSFQNSLPYAKERRSMRALSGVKEPNQPADAIIHHADVRRMLLT 352 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAP 409 ++A A+ A + TA R A+ EA ++ +E A + PI K + ++ Sbjct: 353 QKAFAEGARSMIYHTA---RYADKLAEAVAKGDETAIKKWDDKMGFFTPILKGFLTELGI 409 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI+E + R++ ++ G+ LD+L Sbjct: 410 EAAKHGQQIYGGHGYIKESGMELIARDARIATLYEGTTGVQALDLLG 456 >gi|213967726|ref|ZP_03395873.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] gi|301382364|ref|ZP_07230782.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato Max13] gi|302062376|ref|ZP_07253917.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato K40] gi|213927502|gb|EEB61050.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] Length = 592 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++ A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465 Query: 467 QLFS 470 QLFS Sbjct: 466 QLFS 469 >gi|26990069|ref|NP_745494.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative [Pseudomonas putida KT2440] gi|24984996|gb|AAN68958.1|AE016527_4 acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative [Pseudomonas putida KT2440] Length = 584 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 34/308 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDA-----FIMLAQVE--- 250 LTE + G+D++ + + + DG Y +SG+K F+S D ++LA++ Sbjct: 164 LTEPQAGSDLSLLRCRAVPLGDGGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAP 223 Query: 251 -GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 G G LVP+ LEDG N L L++K+G R +AT L G+L+G + Sbjct: 224 PGNRGLSLLLVPKWLEDGQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLA 283 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVS------GGILIDQPV-----M 355 + M L + + + +A YA RR +S GG P+ M Sbjct: 284 AMFVMMNSARLHVGLQGLGHAEAAWQQARDYALERRQMSAPGRAKGGAQGADPIHLHPAM 343 Query: 356 KRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAP 409 +R + ++ + AL++ A D E R++ A A ++ PI K + Sbjct: 344 RRVLLELRVRTEGMRALAYWTAQWLDIADAAVEPAQRAKAATLAALLTPIVKAAFTEQGF 403 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQ 467 ++ ++A++ +GG GY +E +I + R+S I G+ D++ +L G F Sbjct: 404 SLASKALQVLGGYGYTQEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGGEGFAL 463 Query: 468 LFSTLEQD 475 L S L + Sbjct: 464 LLSELRTE 471 >gi|86140292|ref|ZP_01058851.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217] gi|85832234|gb|EAQ50683.1| putative acyl-CoA dehydrogenase [Leeuwenhoekiella blandensis MED217] Length = 389 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 31/265 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + S + D Y L+G K F+++ + SD I+ A+ G + Sbjct: 125 LCITEPFGGSDVAGMRSTAVRQGDH-YVLNGSKTFITNGVFSDYLIVAAKTSPEKGNKGL 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILI 316 + D G+ +L +K+G R++ T E+ F+ D+ V + E+ K Sbjct: 184 SIFVVDREAEGVSATKL-DKLGWRASDTGEIAFT--------DVKVPAANLMGEEDKGFS 234 Query: 317 Y------LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 Y L+ IM V+ +L A+ Y R G + ++ +A++A +I Sbjct: 235 YIMQHFALERLIMGVNAHARAEYALEYALEYMGEREAFGKTINKFQALRHTVAEMASEIE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A ++ +A + D+ +EA+ +++M K+A VI + ++ +GG GY+E+ Sbjct: 295 MVKAFNYSIAYNLDKGDYVVKEASMSKLMG-------TKIADEVIYKCLQMLGGYGYMED 347 Query: 428 RSIARHYRESPANSILLGSGNAMVL 452 +AR +R+S I G G + +L Sbjct: 348 YPLARMFRDSRLGPI--GGGTSEIL 370 >gi|153836696|ref|ZP_01989363.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] gi|149750045|gb|EDM60790.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] Length = 384 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP +E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADIE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465 + RH+R+ + IL G+ M L + LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384 >gi|42781609|ref|NP_978856.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|52142954|ref|YP_083875.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] gi|206974102|ref|ZP_03235020.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|217959999|ref|YP_002338555.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|222096085|ref|YP_002530142.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] gi|228985654|ref|ZP_04145807.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229091537|ref|ZP_04222746.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|229139191|ref|ZP_04267766.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|229156137|ref|ZP_04284235.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342] gi|229196721|ref|ZP_04323464.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293] gi|42737532|gb|AAS41464.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|51976423|gb|AAU17973.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] gi|206748258|gb|EDZ59647.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|217063605|gb|ACJ77855.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|221240143|gb|ACM12853.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] gi|228586796|gb|EEK44871.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1293] gi|228627320|gb|EEK84049.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 4342] gi|228644250|gb|EEL00507.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|228691831|gb|EEL45579.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|228774049|gb|EEM22462.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|324326516|gb|ADY21776.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 381 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|290462331|gb|ADD24213.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial [Lepeophtheirus salmonis] Length = 408 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 28/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 GLTE G+D A ++ + DG Y L+G K W ++P + ++ A + Sbjct: 146 FGLTEPGNGSDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKG 205 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+VP+ S G+ + ++K+G R ++T + + ++ NV G Sbjct: 206 ITAFIVPK-----SIPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGF 257 Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + V+ +A+ A+ YA +R G + +++ IAD+A+ + Sbjct: 258 KIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRV 317 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L +R A + D ++EAA ++ A T W V+ ++++ +GG G++ Sbjct: 318 EASRLLLYRAAAAKDTGMPYTKEAAMTKLFASETATW-------VVHQSIQVLGGMGFVT 370 Query: 427 ERSIARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 371 DMPSERNYRDARITEIYEGT 390 >gi|302526139|ref|ZP_07278481.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302435034|gb|EFL06850.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 381 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 31/260 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ K ++ TE GG+D+AAI + ++ D + ++G K F+S F++L Sbjct: 111 PVIKENLRCCYAFTEPGGGSDVAAIRTTAERKGD-TWVINGVKTFISYAERAGFVILFAT 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 R V CFLV E G+P G R +G+ +L F + ++ D N Sbjct: 170 TDRARGAKGVTCFLV----EKGTP-GFSLSRPIPTMGDDWEPH-QLTFEDC---VIPDAN 220 Query: 304 VSTGPVED-MKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 GPV K+ + L + ++ ++ +A+ A+ +AR R G + + ++ Sbjct: 221 -RLGPVGGGWKLAVEQLTHGRLKIAAYQLGIAQRCLDIAVEWARNRTTWGKPIASRQAVQ 279 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD A ++ AA L++R A +D+ K RSE A+ + K + +MA V + Sbjct: 280 WMVADSATELDAARLLTYRAAWLYDQGK-RSETEAF------MAKLYATEMAQRVTDRCL 332 Query: 417 ECIGGSGYIEERSIARHYRE 436 + +GG GY +E I YR+ Sbjct: 333 QILGGLGYSKELPIQSFYRQ 352 >gi|110834959|ref|YP_693818.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110648070|emb|CAL17546.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 593 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/337 (21%), Positives = 139/337 (41%), Gaps = 49/337 (14%) Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 P++TS + +A+ + + PK++S E+ T + LTE GTD+ Sbjct: 130 PALTSGACLAVDAHACEELKSQYLPKLYSGEWSGT-------------MCLTEPHSGTDL 176 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260 + ++ DG + ++G K F++ D ++LA++ + FLVP+ Sbjct: 177 GILRTKAVPNDDGSFNITGTKIFITGGEHDLTGNHVHLVLAKLPDAPAGSKGISLFLVPK 236 Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L D G NG+ +++K+G + +AT + F + G+++G+ N + M Sbjct: 237 FLPDADNNPGEANGVTCGSIEHKMGIKGSATCVMNFDDAKGWIIGEPNQGLACMFTMMNY 296 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK-----R 357 L + + VS A+ YAR R +G I++ V + R Sbjct: 297 ERLSIGLQGLGLGEVSYQSAVEYARERLQGRSATGAKNPQGPADPIIVHGDVRRMLMNMR 356 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 AI + +AA + + ++A+++ + ++ P+ K + + Sbjct: 357 AINEGGRALAAYVGMQLDTSKFSEDAEAKKKAEDRVALLTPVAKAFFTDRGLDTTITGQQ 416 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GG GYI E + + R+ + I G+ LD+ Sbjct: 417 VFGGHGYIREWGMEQFVRDCRISQIYEGTNGIQALDL 453 >gi|169828469|ref|YP_001698627.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] gi|168992957|gb|ACA40497.1| Acyl-CoA dehydrogenase family member 9 [Lysinibacillus sphaericus C3-41] Length = 552 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 20/272 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + ++G K W ++ ++D F++ AQ + +V Sbjct: 136 LTESEAGSDALRPKTNARLTEDGKAWLVNGEKQWITNAQLADVFVVFAQTNRGMTALIVE 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL- 315 R S G+ + + K+G + ++T L + +LG+ V G + M IL Sbjct: 196 R-----SIKGVSVGQEEEKMGIKGSSTATLILEDVIVPINCVLGE--VGKGHIVAMNILN 248 Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ + + A++Y + R ++D +++ +AD+A+ I A + ++ Sbjct: 249 MARLKLAFSNIGTAKQAFQIAVNYGKGRKQFERPIVDFTLIQEKLADMAVLIYGAESGAY 308 Query: 375 RLANSFDEA-KSRSEEAAYARIMA-----PITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 R A DEA S S E +I + K C + + EA++ GG GY+++ Sbjct: 309 RTAGKVDEAIASASNETIVQKISEFALECALHKVHCSEALGRIADEAVQIHGGYGYMQDY 368 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R YR++ N I G+ L + +L K Sbjct: 369 EVERLYRDARINRIFEGTNEINRLTMAKMLWK 400 >gi|301787025|ref|XP_002928931.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Ailuropoda melanoleuca] Length = 414 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 154 FALSEPGNGSDAGATSTTARAEGDS-WVLNGTKAWITNSWEASAAVVFASTDRSLQNKGI 212 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R+++T L F + LLG+ P Sbjct: 213 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 261 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+A ++YA R G L ++ +AD+AL Sbjct: 262 GFKIAMQTLDMGRIGIASQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 321 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + ++ L++R A D K ++EAA A++ A + A AV +A++ +GG GY Sbjct: 322 ALESSRLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGY 374 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 375 VTEMPAERHYRDARITEIYEGT 396 >gi|260555411|ref|ZP_05827632.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411953|gb|EEX05250.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 600 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPHAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353 + + +A+ ++ +S ++ YA+ R +SG D+ P Sbjct: 286 LNSMFTFMNTARIGTAVQGLAASEISFQGSLSYAKERLAMRSLSGPKYPDKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFS--TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L EQ S + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIEQFISQHQFNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521 >gi|262376554|ref|ZP_06069783.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308693|gb|EEY89827.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 602 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 50/350 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 + +A+++ +P+ + + P + S + T + +TE G+ + + Sbjct: 136 TAAAANLIQAFASPKQKQIFLPHMLSGRFAGT-------------MAMTEPNVGSSLGDL 182 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ +DGIY + G K F+S D ++LA+++ + F+VP+ Sbjct: 183 NTKAIPQADGIYKIKGQKMFISGGDQDITENIVHLVLARIQDAPQGVKGISLFIVPKFKT 242 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD----LNVSTGPVED 311 EDGS N + L +K+G R + L F N G+L+G+ L + + Sbjct: 243 NEDGSLGEANDVQLAGLLHKMGYRGTTSTVLSFGENDNCLGYLIGEPGHGLKYMFKMMNE 302 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-------MKRAIADIAL 364 ++ + L +A++ G SL A + + R V +PV +KR + Sbjct: 303 ARVGVGLGAAMIGYRGYLESLDYAKNRPQGRPVHEKTPDSKPVNIIEHTDVKRMLLAQKS 362 Query: 365 DIAAATALSFRLANSFDEAKSRSEE--AAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + + AL A DE ++ +E A ++ P+ K + P A++ +GG+ Sbjct: 363 YVEGSLALCLFAARLIDELQAAQDEDSAILLDLITPVVKSFPSAYGPKANDLAIQVLGGA 422 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLE---KGTNLFEQ 467 GY E + + YR++ N I G+ LD+L L + KG NL Q Sbjct: 423 GYTREYPVEQCYRDNRLNPIHEGTYGIQSLDLLGRKLWQHNGKGLNLLMQ 472 >gi|229153504|ref|ZP_04281682.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] gi|228630108|gb|EEK86759.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] Length = 379 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 18/278 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + G + ++K+G RS+ T E+ F + + N+ G Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDC---RIPVENLLGGE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K+ + LD ++ V +A+ ++ YAR RH G + Q + +AD+ Sbjct: 229 GQGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ AA L+++ A E +E+A +++ A A V EA++ GG Sbjct: 289 ATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY ++ + R+ R++ I G+ L + +L K Sbjct: 342 GYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|254451856|ref|ZP_05065293.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238] gi|198266262|gb|EDY90532.1| acyl-CoA dehydrogenase [Octadecabacter antarcticus 238] Length = 378 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 16/255 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ G Y LSG+K F+S SDA+I++A+ G G + Sbjct: 124 LTEPASGSDAASLKTKADVTEQG-YALSGNKAFISGGGYSDAYIVMART-GVAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI- 316 + + GL + L++K+G RS T +++ N + LLGD++ G MK L Sbjct: 182 FVVENGTEGLSFGGLEDKMGWRSQPTRQVQLVNCAISAENLLGDID--QGFKYAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ + +L + +HY R G L ++ +AD+ +D+ +A + Sbjct: 240 GRLNIAACSIGAAQSALDKTVHYMAERQAFGQSLDQFQALQFRLADMEIDLQSARTFLRQ 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D + A + + K C + V + ++ GG GY+ + I + R Sbjct: 300 AAWKLD------TQVPDATVFCAMAKKLCTETGSRVADQCLQLHGGYGYLADYGIEKIVR 353 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 354 DLRVHQILEGTNEIM 368 >gi|330505314|ref|YP_004382183.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328919600|gb|AEB60431.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 601 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNAVSCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ + I YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEIGFQGGIKYARERLQMRSLTGPKAPEKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407 ++R + + A+ + A D +++ E+ A ++A PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVQHSQNEEEKKAADELLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + M+ GG G+I E + ++ R+ + + G+ LD+L Sbjct: 405 GFESASHGMQIYGGHGFISEWGMEQNLRDCRISMMYEGTTGVQALDLLG 453 >gi|163849111|ref|YP_001637155.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222527084|ref|YP_002571555.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670400|gb|ABY36766.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450963|gb|ACM55229.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl] Length = 382 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 46/283 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D A + + + D + ++G K W ++P++ I+ A Sbjct: 113 PAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGD-EWVINGQKMWITNAPIAGHIIVTAV 171 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + +G F+VPR G+P GL + + + K+G R + + + +L D+ Sbjct: 172 TDPDLGKKGISAFIVPR----GTP-GLSFGKHEPKMGLRGSVSTAV--------MLDDVR 218 Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGIL 349 V P E++ + L LD + + M + LA+A + A R R G + Sbjct: 219 V---PRENLLGERGRGFIQFLQVLDGGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPI 275 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + IA++A+D+AAA AL + A D + + EAA A++ A C+ Sbjct: 276 GAHQSVANMIANMAVDLAAARALVYGAARLKDAGRPYTREAAIAKLFASEASERICR--- 332 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 +A++ GG GY +E + R YR++ + +G G + +L Sbjct: 333 ----DAIQVFGGYGYSQEYPVERLYRDT--RLLTIGEGTSEIL 369 >gi|330812188|ref|YP_004356650.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380296|gb|AEA71646.1| putative dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 601 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + L++K+G NAT + F G+L+G N + Sbjct: 233 PKFLPNADGSIGQRNAVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ + + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + + A M PI K + ++ Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G+ G + + + ++ ++ G LT K+ +A+ Sbjct: 473 KFCQ--GNEGNEAVKEFVEPLAALNKEWGE---LTMKVGMAA 509 >gi|288931930|ref|YP_003435990.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] gi|288894178|gb|ADC65715.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] Length = 395 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 24/280 (8%) Query: 178 IFSREYDPTNKAPMQKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +F RE P AI TE + G+D+A I + ++ ++ + ++G+K F++ Sbjct: 100 LFGREDQKEKYLPPLAKGEAISCACFTEPQSGSDLAGIKTTAREENEH-FVINGNKIFIT 158 Query: 237 S-PMSDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++D +I+LA+ E R + F+V R E GL +++K+K+G R++ T E+ Sbjct: 159 NGSIADFYIVLARTDKGEKRHHGLSVFVVERGTE-----GLEARKMKDKLGIRASDTAEV 213 Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 F N L+G+ + + + A +V + + A+ YA+ R + Sbjct: 214 FFKNVKVPKENLIGERGRGFYQAVEFFNVTRIHVAFQAVGIAQGAFELALEYAKNRELFE 273 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 LID + + +A + +I AA L+++ A +D+ +S+ + + KY+ K Sbjct: 274 RKLIDFQMTREKLAKMRTEIEAARLLAYQAALYYDK-NHKSDPG-----LTAMAKYYTAK 327 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A + EA++ GG G++ +I+R YR+ I G+ Sbjct: 328 IAQKAVTEALQIFGGHGFVSS-AISRMYRDVRVLEIYEGT 366 >gi|190572315|ref|YP_001970160.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia K279a] gi|190010237|emb|CAQ43845.1| putative acyl CoA dehydrogenase [Stenotrophomonas maltophilia K279a] Length = 387 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMDAGAKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G RS+ T EL F N G + G + V ++ Sbjct: 187 TAFLVEKGMKGFSTSQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ + + M V + Y RH G + +++ IAD+ + + A A Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D+ ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355 Query: 432 RHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 356 RLWRDAKLYEIGAGT 370 >gi|330941649|gb|EGH44428.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 600 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 A V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G LN + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324 Query: 346 GGILID------QPV-------MKRAIADIALDIAAATALSFRLANSFDEAKS------R 386 G L D +PV ++R + + A L + FD+ ++ R Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKTYVEGAFDLCLYASRLFDDTQTGESEDDR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N+I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|226952229|ref|ZP_03822693.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226837067|gb|EEH69450.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 375 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGHNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRVHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA HYA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATHYAKERLTFGKPIFEHQAIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M+ V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMSERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+++ I R YR++ I G+ + Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|262376461|ref|ZP_06069690.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308600|gb|EEY89734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 384 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 35/309 (11%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200 ++ +E GH TSA+ +L+ T I E P T IG Sbjct: 69 ILVAMELGH------TSAAFRSLIGTNNGIGSSGIIIDGTEEQKQKYLPRYATGEIIGSF 122 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA----QVEGRVGC 255 LTE G+D AA+ + K D Y L+G K F++ +P + F ++A +++G G Sbjct: 123 CLTEPDSGSDAAALKTSAVKDGD-YYILNGTKRFITNAPRATTFTVMARTNQEIKGASG- 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 + L+E G+P GL ++ K+G + T ++ F N L+G + G M Sbjct: 181 -ISAFLVEAGTP-GLSLGKIDKKMGQHGSYTCDVIFDNCKVHKDQLIGGVE-GIGFKTAM 237 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + ++G V +AE A++YA R G + + +++ +AD +I Sbjct: 238 RVL---DKGRLHIAGYSVGMAERMLEDALNYAVERKQFGQPIANFQLIQGMLADSKAEIY 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + A D ++ + EA+ A++ A +M V ++ GG+GYI E Sbjct: 295 AAKCMVLDAARLRDAGQNVTTEASCAKMFAT-------EMCGRVADRCLQIHGGAGYISE 347 Query: 428 RSIARHYRE 436 SI R YR+ Sbjct: 348 YSIERFYRD 356 >gi|171057674|ref|YP_001790023.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170775119|gb|ACB33258.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 597 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 55/330 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 TP + + + K+ S E+ T + LTE + G+D+ I S+ + + DG Sbjct: 146 TPELRERYLSKVVSGEWLAT-------------MNLTEPQAGSDLGLIRSKAEPL-DGTL 191 Query: 226 -----YCLSGHKWFLSSPMSD-----AFIMLAQVE----GRVGC--FLVPRLLEDGSPNG 269 +SG+K F+S D ++LA++ G G LVP+ L DG+ N Sbjct: 192 TSGSRVAVSGNKIFISGGDQDMTANIVHLVLARLPDAPAGTKGLSLILVPKFLPDGTRNA 251 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 +++K+G ++T ++ F G+LLG+ + M L A+ ++ + Sbjct: 252 AWCDGIEHKMGIHGSSTSQMRFERATGWLLGEPGTGLAAMFLMMNSARLHVAMQGLAHLE 311 Query: 330 VSLAEAIHYARRR----------------HVSGG--ILIDQPVMKRAIADIALDIAAATA 371 + +A+ YA+ R SGG ++ P M+R + + A Sbjct: 312 GATQKALAYAQERVQLRAPGRPADAMPSGGASGGPDPIVWHPAMRRILLTLQAQTEGARV 371 Query: 372 LSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 L+ + DE++ E A AR ++ P+ K + + +A+ GG GY+ Sbjct: 372 LAGWIGLLLDESEQHPEPAQRARAADLVALLTPVAKAFLTDLGHRGADDALGVFGGYGYV 431 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455 E I + R+S I G+ +D++ Sbjct: 432 HEYGIEQQVRDSRIAMIYEGTNQIQAIDLV 461 >gi|121608205|ref|YP_996012.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552845|gb|ABM56994.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 598 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 149/374 (39%), Gaps = 64/374 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + L TP K + PK+ S + T + LTE GT Sbjct: 128 MYPGLSHGAYACLHAHGTPEQKKIYLPKLTSGAWTGT-------------MCLTEAHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D ++LA++ + F+ Sbjct: 175 DLGLLRTKAEPQADGSYKITGSKIFISAGEHDMAGNIVHLVLARLPDAPAGSKGISLFVC 234 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + DGS N + L++K+G NAT ++ G L+G + Sbjct: 235 PKFIVHADGSLGERNAIDCAGLEHKMGIHGNATAQIMLDGASGSLVGQPHKGLA-----A 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYA------------RRRHVSGGILIDQPVMK 356 + + +++A + V + L E A+ YA R R + +I P ++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKERLQMRSLAGPRARDLPADPIIVHPDVR 349 Query: 357 R------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R A A+ +++ AL + K R + ++ PI K + Sbjct: 350 RMLLTAKAYAEGGRALSSYCALLLDKEQQHPDEKVRQASSEMLALLTPIVKAFITDNGYE 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465 + GG GYI+E + +H R++ N I G+ LD+L G N F Sbjct: 410 ATTLCQQVFGGHGYIKESGMEQHVRDARINMIYEGTNTIQALDLLGRKVLGNNGATLKKF 469 Query: 466 EQLFSTLEQDLGSS 479 QL L Q+ G++ Sbjct: 470 GQLLGQLAQEAGTN 483 >gi|254227625|ref|ZP_04921056.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25] gi|262395673|ref|YP_003287526.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25] gi|151939667|gb|EDN58494.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25] gi|262339267|gb|ACY53061.1| branched-chain acyl-CoA dehydrogenase [Vibrio sp. Ex25] Length = 384 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A+ G V F Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGASGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMNERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 + RH+R+ + IL G+ M L V LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384 >gi|313111862|ref|ZP_07797654.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310884156|gb|EFQ42750.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 598 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 45/311 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ I ++ +DG + +SG K F+S+ MS+ + L A Sbjct: 164 LTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDMSENIVHLVLAKLPDAPAGT 223 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+VP+ L D G N + +++K+G +++AT + F G+L+G+ N Sbjct: 224 KG-ISLFIVPKFLPDAAGEAGVRNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQPV------ 354 + M L + + + S A+ YAR R ++G D+P Sbjct: 283 GLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDKPADPIIVH 342 Query: 355 --MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 ++R + + AL++ A D +A R A + PI K + + Sbjct: 343 PDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTE 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------L 457 V M+ GG GYI E + + R+ I G+ LD+L L Sbjct: 403 TGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKL 462 Query: 458 LEKGTNLFEQL 468 L T L QL Sbjct: 463 LRGFTKLVHQL 473 >gi|302871966|ref|YP_003840602.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor obsidiansis OB47] gi|302574825|gb|ADL42616.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor obsidiansis OB47] Length = 381 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 24/280 (8%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 + +D +++ A + G + + + G + ++K+G R+++T EL F + Sbjct: 158 NGGEADVYVVFAVTDKSKGPRGISAFIVEKEYEGFYCGKKEDKMGIRASSTTELIFEDCK 217 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 LLG TG + MK D V+ M V +A+ AI YA+ R G Sbjct: 218 VPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKERVQFGQ 272 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCK 406 L ++ +AD+ ++I AA A+ + D AK S+E++ ++ A Sbjct: 273 PLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS-------D 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 326 VAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|284048812|ref|YP_003399151.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] gi|283953033|gb|ADB47836.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] Length = 383 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 20/270 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 AP+ + + GLTE GTD +A + D Y L+G K F+++ +D +++ A Sbjct: 112 APIAEGTHVGAFGLTEPSAGTDASAQQTTAVLKGDK-YILNGSKIFITNGKEADTYVVFA 170 Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + G + +LE G P G + ++++K+G ++ T EL F + + N+ Sbjct: 171 MTDKSQGVHGISAFILEKGMP-GFRFGKIEDKMGGHTSITAELIFEDC---EVPKENLLG 226 Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 E KI + LD + V+ + +AE A+ Y++ R G + ++ +A Sbjct: 227 KEGEGFKIAMETLDGGRIGVAAQALGIAEGALAAAVKYSKEREQFGRSISKFQALQFMMA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A I AA L + A +E K SE AA A+ A +A V +A++ G Sbjct: 287 DMATKIEAARYLVYHAAMLKNEGKPYSEAAAMAKCFA-------SDVAMEVTTDAVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY + R+ R + I G+ M Sbjct: 340 GYGYTVDYPAERYMRNAKITQIYEGTNQVM 369 >gi|197103757|ref|YP_002129134.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196477177|gb|ACG76705.1| glutaryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 395 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 28/243 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE GG+D A++ + +K+ DG Y L+G K W +SP+SD ++ A+++G++ FLV Sbjct: 141 FGLTEPDGGSDPASMRTTARKV-DGGYVLNGAKMWITNSPISDVALVWAKLDGKIRGFLV 199 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 R E G ++KNK+ R++ T E+ S+ F +L + GP Sbjct: 200 ERGTE-----GFETPQIKNKLSLRASVTGEIALSDAFVPEDMMLPGVEGLRGPFS----- 249 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAAT 370 L+ A ++ + AE +A R +VS G L + ++++ +AD+ +IA Sbjct: 250 -CLNKARYGIAWGAMGAAEFCLHASRDYVSSRSLFGRTLASRQLVQKKLADMQTEIALGF 308 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + L D E A+ + K C A + A + GG+G E + Sbjct: 309 EGALALGRLID-------EGAWVPEAISMLKRNNCGKALDIARVARDMHGGNGISGEYHV 361 Query: 431 ARH 433 RH Sbjct: 362 MRH 364 >gi|302130683|ref|ZP_07256673.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 592 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTKAEPQTDGAYTITGSKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSLGARNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY------------ARRRHVSGGILIDQP 353 + M L I ++ S A+ Y A+ + + +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAVEYAVDRLQSRAPTGAQNKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++ A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGALY 465 Query: 467 QLFS 470 QLFS Sbjct: 466 QLFS 469 >gi|311899801|dbj|BAJ32209.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054] Length = 382 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCF 256 LTE G+D A +T++ ++ DG + LSG K F+++ +D ++ A+ G V F Sbjct: 125 LTEPGTGSDAANLTTRAERDGDG-WLLSGTKMFITNGTWADVALVFARTGGPGHRGVTAF 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 LVP G + + K+G R AT EL G G V+ + Sbjct: 184 LVPT-----DAPGFERRLVHGKLGLRGQATAELVLDRVRVPDGARLGAEGGGFAVAMAAL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ + A V + SL A+ YA R G + +++ +ADIA+D+ AA Sbjct: 239 AKGRMSV----AAGCVGIAQASLDAAVRYAGEREQFGKPIAAHQLVQELLADIAVDVDAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R+A+ D + E++ A++ A C A++ GG G+I+E Sbjct: 295 RLLTWRVADLIDRGLPFAAESSVAKLFASEAAVRCAN-------NALQVFGGYGFIDEYP 347 Query: 430 IARHYRESPANSILLGS 446 + ++ R++ ++ G+ Sbjct: 348 VGKYLRDARVMTLYEGT 364 >gi|110639765|ref|YP_679975.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406] gi|110282446|gb|ABG60632.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406] Length = 351 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 142/298 (47%), Gaps = 35/298 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236 F E P+ T IG LTE G+D + + ++ D + L+G K F++ Sbjct: 73 FGNEEQKAKYLPLLATGKWIGAWALTEANTGSDSGNMKTVARQDGD-YWILNGSKNFITH 131 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 + S+ ++LA+ + F ++E G+ GL + R +NK+G R++ T EL N Sbjct: 132 AKSSNVVVVLARHADSEDKKFSSAFIIEKGT-EGLTHGRKENKMGMRASETCELLLDNVR 190 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 LLG N+ G + MK+L D +S++ + + +A+ A+ Y++ R Sbjct: 191 VHKSQLLG--NIGDGFKQAMKVL---DGGRISIAALSLGIAQGAYEAALQYSKERQ---- 241 Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +QP+ + + D+A +I AA L+++ A+ + + + EAA A++ A Sbjct: 242 -QFNQPIGNFQGISFKLVDMATEIEAARLLTYKAADMKMKGQPMTREAAMAKLYAS---- 296 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +++ V EA++ GG GY ++ + + YR++ +I G+ + + L+K Sbjct: 297 ---EVSVRVANEAVQIFGGYGYTKDYPVEKFYRDAKLCTIGEGTSEIQKIVIAKSLQK 351 >gi|325478441|gb|EGC81555.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13] Length = 642 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K G GLTE+ G+D + + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F N + N+ Sbjct: 172 TTPGIGTHGISAFIVEKDFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + + + A+ YA+ R G + +AD+ Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A + + A + + S EAA A+ +A +A + EA++ GGS Sbjct: 289 ATHLHGARLMIYHAAELKENHERYSAEAAMAKQVA-------SDLAMKIATEAVQVYGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G+I+ + R +R++ I G+ M Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369 >gi|319792925|ref|YP_004154565.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315595388|gb|ADU36454.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 596 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 44/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + S+ + DG Y + G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F+VP+ + +DG+ N + +++K+G +++ T L++ + G+L+G Sbjct: 221 GVKGISLFVVPKFMVGKDGALGERNDVHCVSIEHKMGIKASPTAVLQYGDNGGAVGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGI--- 348 N +E M I ++SA +V +++AE A+ YA+ R V G I Sbjct: 281 QENRG---LEYM--FIMMNSARYAVGMQGIAIAERAYQHAVAYAKDRVQSRPVDGSINAS 335 Query: 349 --LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +I P +KR A + +A+ A ++ A+ +A +R + A+ M P+ Sbjct: 336 APIIHHPDVKRMLMTMRAYTEGCRAMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 396 KGYSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|302387339|ref|YP_003823161.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1] gi|302197967|gb|ADL05538.1| Butyryl-CoA dehydrogenase [Clostridium saccharolyticum WM1] Length = 380 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 38/308 (12%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 ++ SP+ S + L T +++ P + S NK + LTE G+ Sbjct: 85 YVSSPNSLSGGPLLLSGTEEQKRNYLPSLIS-----GNKK--------LCFALTEPGAGS 131 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED--GS 266 D + S K D Y L+G K F++ +P++D ++ A+ + G + + D + Sbjct: 132 DAGGMQSTAVKDGDS-YILNGRKTFITMAPLADYAVIYAKTDMTKGTKGISAFIVDMKNT 190 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 P G+ + ++K+G AT ++ N LLG+ + G + MK L D+ M Sbjct: 191 P-GISCGKPEHKMGVIGCATSDIIMDNARIPAENLLGEEGM--GFINAMKTL---DTGRM 244 Query: 324 SVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 V+ + +A EAI YA+ R G + D + IAD+A + AA L ++ A Sbjct: 245 GVAAQSIGVAQGALDEAIKYAKERKQFGKRIGDFQAIAFMIADMATKLEAAKQLVYKTAY 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D + S EA+ A KY+ ++ + ++A++ GG G+I++ I R YR+ Sbjct: 305 LMDTHQPASMEASMA-------KYYASEVCNEIASKALQIHGGYGFIKDYKIERMYRDCR 357 Query: 439 ANSILLGS 446 +I G+ Sbjct: 358 VFTIYEGT 365 >gi|295085068|emb|CBK66591.1| Acyl-CoA dehydrogenases [Bacteroides xylanisolvens XB1A] Length = 568 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 50/374 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225 P H + P+I E + + LTE G+D+ ++ + DG Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199 Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + L+G K F+++ +D ++LA+ E G + + D G+ +R++NK+G + Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339 T EL + N L GD + G ++ ++ ++ A + ++ V L++A + YA Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385 + R G +I+ P + +A + + A AL ++ + D K+ Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375 Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 R E+ YA++ P+ K + A + ++ GGSG++ E + R YR++ SI Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435 Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496 G+ + + + G+ + FE + + E + L S KK+ + S + KE Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFKASTNAVKE 495 Query: 497 --DKGLARFLTEKI 508 D+ L F K+ Sbjct: 496 VQDQELLDFTARKL 509 >gi|77461391|ref|YP_350898.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77385394|gb|ABA76907.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 601 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G+ N + +++K+G NAT + F GFL+G N + Sbjct: 233 PKFLPNADGTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ + + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + + A M PI K + ++ Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|315925640|ref|ZP_07921850.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621181|gb|EFV01152.1| butyryl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] Length = 639 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 18/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + D Y L+G K F++ +P +D +++ A +G + Sbjct: 123 FGLTEPNAGSDAGGTETTAVDKGDH-YLLNGGKVFITNAPKADTYVVFAVTTPDIGTHGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + +K+G RS++T EL F+N + N+ + KI ++ Sbjct: 182 SAFIVEKGWAGFDFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGQEGDGFKIAMMT 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ YAR R G + Q + IAD+A + A L Sbjct: 239 LDGGRIGIASQALGIAQGAYEAALAYARERVQFGKPIGFQQSISFKIADMATKLRMARFL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A + S EAA A K + MA V+ +A++ GG+GY++ I R Sbjct: 299 VYSAAELKTHHEPYSVEAAMA-------KGYASDMALEVVNDALQIFGGTGYLKGMDIER 351 Query: 433 HYRESPANSILLGSGNAM 450 YR++ +I G+ M Sbjct: 352 MYRDAKITTIYEGTNEIM 369 >gi|269964390|ref|ZP_06178632.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] gi|269830887|gb|EEZ85104.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] Length = 384 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVRDGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 + RH+R+ + IL G+ M L V LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIVARRLLTEGVELL 384 >gi|311743087|ref|ZP_07716895.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311313767|gb|EFQ83676.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 381 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 55/345 (15%) Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 D F V+ ++ K+ AA + + +T+ +V L T + K W P + + Sbjct: 67 DFRFNAVLAEELSKVSAALASCVG-------IHSDITAPYLVDLGTEEQ-KKRWLPGVAT 118 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 E + + +G+TE GG+D+AA+ + + D + ++G K F+++ S Sbjct: 119 GE-------------ILLAIGMTEPGGGSDLAALKTTAVRDGDQ-WVINGSKTFITNGFS 164 Query: 241 -DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 D + + G + + + G R +K+G + T EL F N L Sbjct: 165 ADLIVTAVRTSPEKGAKGITLFGIEATDEGFSRGRKLDKVGQTESDTAELFFENV---RL 221 Query: 300 GDLNVSTGPVEDMKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 GD V G V+ + IY L AI +V+ + LAE I Y + RH G Sbjct: 222 GDDRV-LGEVD--RGFIYMMERLPQERLSCAISNVAHAKQILAETIQYTKDRHAFG---- 274 Query: 351 DQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 QP+ K +A++ I AA A D A I A K+W Sbjct: 275 -QPIGAFQHNKFLLAELVTKIEAAEAY-------VDAAVVAHTAGRLTAIDAAKVKWWSS 326 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + V+ ++ GG G++ E +AR +R++ I GS M Sbjct: 327 DIQNDVLDHCVQLHGGYGFMNEYRVARAWRDARVTRIWAGSNEIM 371 >gi|228917950|ref|ZP_04081486.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841747|gb|EEM86858.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 379 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|322807153|emb|CBZ04727.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065] Length = 635 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + + + S G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A+ + + S EAA A K + + ++ +A++ GGS Sbjct: 289 VTKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365 >gi|56419851|ref|YP_147169.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|261419522|ref|YP_003253204.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297530508|ref|YP_003671783.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|319766338|ref|YP_004131839.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|56379693|dbj|BAD75601.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|261375979|gb|ACX78722.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297253760|gb|ADI27206.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|317111204|gb|ADU93696.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 381 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 43/303 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK + E + + +TE G+D+A I++ K Sbjct: 98 IASYGTEEQKQKWLPKCVTGE-------------LITAIAMTEPGAGSDLANISTTAVKD 144 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGL 270 D Y ++G K F+++ + I++A C P+ ++E +P G Sbjct: 145 GD-YYIVNGQKTFITNGIHADLIVVA-------CKTDPQAKPPHRGISLLVVERDTP-GF 195 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 R K+G + T EL F + LLG+ + + L AI + + Sbjct: 196 TRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 255 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 V + Y ++R G + + ++ +A++A +IA R+ K Sbjct: 256 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIV 315 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + A K+W +MA V AEAM+ GG GY+EE IAR YR+ P ++I G+ Sbjct: 316 TEVSMA-------KWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTN 368 Query: 448 NAM 450 M Sbjct: 369 EMM 371 >gi|321265712|ref|XP_003197572.1| acyl-CoA oxidase [Cryptococcus gattii WM276] gi|317464052|gb|ADV25785.1| Acyl-CoA oxidase, putative [Cryptococcus gattii WM276] Length = 427 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 43/312 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 +++ L +P + + W P + T L+E G+D A+ + + Sbjct: 142 TVIRLYGSPEIQQKWLPDL--------------ATCKVGSFCLSEPSAGSDAFALQTTAK 187 Query: 220 KISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272 S G Y L+G K W +S ++ F++ A V+ G CF++ + + G+ Sbjct: 188 LDSSGDFYVLNGSKMWISNSAEAETFLVFANVDPSKGYKGITCFIMSKDM------GVEI 241 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVS 331 + + K+G R+++T L F + + N+ + KI I L+ + ++ + Sbjct: 242 AKKEAKLGIRASSTCLLNFDDV---KIPKENIVGEIGKGYKIAIEILNEGRIGIAAQMIG 298 Query: 332 LAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 LA+ ++ YA +R G + + M A++A +I AA L++ A +E + Sbjct: 299 LAQGAFDKSLEYAYQRKQFGKPVGEFQGMGFQFAEVATEIEAARLLTYNAARLKEEGRPF 358 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++EAA A KY+ +A A+E GG G++ E + +++R+S +I G+ Sbjct: 359 TKEAAMA-------KYYASVIAQKAAGSAIEWAGGQGFVREVGLEKYWRDSKIGAIYEGT 411 Query: 447 GNAMVLDVLNLL 458 N + + L Sbjct: 412 NNIQLDTIAKFL 423 >gi|300693600|ref|YP_003749573.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07] gi|299075637|emb|CBJ34934.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07] Length = 385 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252 I LTE G+D A++ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAASLQTRATLDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISAFIVP-----ADTPGIALGKPDRKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYAKERRQFGQPIADFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK ++ ++A TK +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGKQDHEVSMLASCTKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 + E + R YR+ Sbjct: 349 VAEYKVERFYRD 360 >gi|281347553|gb|EFB23137.1| hypothetical protein PANDA_018993 [Ailuropoda melanoleuca] Length = 396 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 137 FALSEPGNGSDAGATSTTARAEGDS-WVLNGTKAWITNSWEASAAVVFASTDRSLQNKGI 195 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R+++T L F + LLG+ P Sbjct: 196 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSLLGE------PGM 244 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+A ++YA R G L ++ +AD+AL Sbjct: 245 GFKIAMQTLDMGRIGIASQALGIAQAALDCAVNYAENRRAFGAPLTKLQSIQFKLADMAL 304 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + ++ L++R A D K ++EAA A++ A + A AV +A++ +GG GY Sbjct: 305 ALESSRLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAVTHQAIQILGGMGY 357 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 358 VTEMPAERHYRDARITEIYEGT 379 >gi|90411314|ref|ZP_01219326.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK] gi|90327843|gb|EAS44174.1| putative acyl-CoA dehydrogenase [Photobacterium profundum 3TCK] Length = 396 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 27/282 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-----------QV 249 LTE G+D AA+T+ +K+ G Y L+G K F+S + +D +++A + Sbjct: 124 LTEPNAGSDAAALTTSAKKVK-GQYILNGAKTFISGAGETDVLVVMARTVNEDQGSNKKA 182 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 E + G + + G+ Y R + K+G S T + F N LLG Sbjct: 183 EHKSGAKGISAFIVPVDATGITYGRKEPKMGWNSQPTRSITFDNVAIPARNLLG--QEGE 240 Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G MK L ++ A SV + +L +A Y R G L ++ +AD+A Sbjct: 241 GFTFAMKGLDGGRINIATCSVGTAQQALNQATQYMNERKQFGKSLAQFQGLQFKLADMAT 300 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA L A+ D + E AY + K + + V +A++ GG GY Sbjct: 301 ELVAARQLVRYAASKLD--RQDPEATAYC----AMAKRFATDIGFTVCDQALQLYGGYGY 354 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 I+E + R++R+ + IL G+ M L + LL +GT + Sbjct: 355 IKEYPLERYFRDVRVHQILEGTNEIMRLIIARRLLAEGTEIL 396 >gi|46199854|ref|YP_005521.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27] gi|46197481|gb|AAS81894.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27] Length = 372 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 27/254 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D ++ ++ +++ G + L+G K W S+ + ++++A+ E + FLV Sbjct: 123 LTEPQAGSDAKSLRAEARRVKGG-FVLNGVKSWITSAGHAHLYVVMARTEKGISAFLV-- 179 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 E G+P GL + R + K+G + T E+ F LLG+ L Sbjct: 180 --EKGTP-GLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGWGLAYA-----LAG 231 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + V+ V +A A YA R G L + + IAD+ + IAAA AL Sbjct: 232 LDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARAL 291 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D + + EA+ A++ A V EA++ +GG GY + + R Sbjct: 292 VLEAARKKDRGERFTLEASAAKLF-------ASAAAVEVTREAVQVLGGYGYHRDYRVER 344 Query: 433 HYRESPANSILLGS 446 +YR++ I G+ Sbjct: 345 YYRDAKVTEIYEGT 358 >gi|71065525|ref|YP_264252.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71038510|gb|AAZ18818.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 597 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/330 (21%), Positives = 141/330 (42%), Gaps = 49/330 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y ++G K F+S+ D I LA++ G Sbjct: 164 LTEAHAGSDLGIIRTKAEPNTDGSYSITGQKIFISAGEHDLTDNIIHICLARLPGAPAGT 223 Query: 253 --VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+++ ED G N + +++K+G +++AT + F G+L+G N Sbjct: 224 KGISLFIVPKIMVNEDNSLGEKNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQP 353 + + + +A+ ++ + ++ YA+ R +SG +I P Sbjct: 284 LQCMFTFMNVARIGTAVQGLTAAEYAFQGSLMYAKDRLAMRSLSGAKAPEKAADPIIVHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKMA 408 ++ + AL + L++ D AK +E +A ++ PI K + + Sbjct: 344 AVRNMLLTEKAFAEGGRALVYYLSHFADTVAKGEGDELKFADQMLSLLTPIAKAFLTETG 403 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 ++ GG G+I E + ++ R++ + G+ LD+L Sbjct: 404 LEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLG------------ 451 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDK 498 + LGS GK + ++ + C ++K Sbjct: 452 ----RKVLGSQGKLLTNFVKIIQAFCDDNK 477 >gi|85705433|ref|ZP_01036531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] gi|85669858|gb|EAQ24721.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 391 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 18/280 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG---RVGC 255 +TE G+D + ++ + DG + LSG KWF++S SD I+ A V+ + Sbjct: 122 FAITEADAGSDPRRVKTKA-VMRDGQWYLSGEKWFVTSYNASDFIIVHAHVDDDPDKPTL 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV D + + R + N + EL F T LG++ +D Sbjct: 181 FLV-----DKPVLNMTHVRSPKFMHNFAFDHAELIFDETPVAADRQLGEIGQGFELTKDW 235 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A S+ + A +A RH + D ++ +AD+A+DI AA ++ Sbjct: 236 FVEARLQIAAHSIGAATRAAEIANEFATSRHQFDRAIRDFQGIEFMLADMAVDIFAAKSM 295 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R+A D RS A+A + K +C + + VI +A++ +GG GY+ E R Sbjct: 296 LYRVAAEIDAGADRSRVHAHASAL----KLFCSEASGRVIDKAVQILGGRGYMRENPAER 351 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK-GTNLFEQLFST 471 YR+ + I G+ V + K G ++ + F T Sbjct: 352 LYRDIRVDRIWEGTSEIQRSVVGGRIRKHGMRIYSEAFET 391 >gi|115525226|ref|YP_782137.1| butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53] gi|115519173|gb|ABJ07157.1| Butyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53] Length = 378 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 27/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR-VGCFLV 258 +TE G+D+ I + K+ DG Y L G K W S+P++D F + A+ E R + FLV Sbjct: 125 MTEPDAGSDLGGIATTATKV-DGGYRLKGQKIWVTSAPVADFFTVFARAGEARKLTIFLV 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 R E GL + K+G + T EL + F +L V G K+L Sbjct: 184 ERHFE-----GLIVGKAIPKMGVWALPTSELALDDCFVPDSHML-SREVGDGEAHLRKLL 237 Query: 316 --IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + +++ G R +L EAI YA R G + ++ +A++A D+ AA L Sbjct: 238 AEVRIVTGALALGGARGALDEAIRYAAERKQFGKPINAYQAVQIKLAEMATDLEAARRLV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A D K EAA A++ A C A ++A GY E + RH Sbjct: 298 HYAAWLKDSGKPHHREAAMAKLFASEAAAQICDKAARILAS-------YGYSMEFPVQRH 350 Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458 R+ L+G G + D+L L+ Sbjct: 351 LRD--IRFTLIGGGTS---DILKLI 370 >gi|226944607|ref|YP_002799680.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226719534|gb|ACO78705.1| acyl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 591 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 46/316 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + P+++S E+ T + LTE G+D+ + ++ + +DG Y +SG K Sbjct: 151 YLPRLYSGEWAGT-------------MCLTEAHAGSDLGLLRTRAEPRADGSYAISGGKI 197 Query: 234 FLSSPMSDA-----FIMLAQV------EGRVGCFLVPRLL-----EDGSPNGLCYQRLKN 277 F++ D ++LA++ + FLVP+ L E G+ N L L++ Sbjct: 198 FITGGEQDLTANILHLVLARLPDAPAGSKGISLFLVPKFLVAPNGELGARNALSCGSLEH 257 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F G+L+G+ + + M L I + S A Sbjct: 258 KMGIKASATCVMNFDGATGYLIGEPHKGLAAMFTMMNYERLSIGIQGIGCAEASYQNARA 317 Query: 338 YARRR---HVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK- 384 YAR R GG ++ P ++R + + A S +A D AK Sbjct: 318 YARERLQGRAPGGARAPQKSADPIVAHPDVRRMLLTMKALTEGGRAFSTYVAQQLDLAKY 377 Query: 385 ----SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 R A ++ PI K + + GG GYI E + R+ Sbjct: 378 SEDDERRHAEALVALLTPIAKAFFTDTGLESCIHGQQVFGGHGYIREWGQEQLVRDVRIA 437 Query: 441 SILLGSGNAMVLDVLN 456 I G+ LD+L Sbjct: 438 QIYEGTNGIQALDLLG 453 >gi|116624770|ref|YP_826926.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227932|gb|ABJ86641.1| acyl-CoA dehydrogenase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 599 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 37/318 (11%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGT 209 L S SV ++ V + T P V W + P T IG L+E + Sbjct: 109 LASFSVAFSAHVGIGTLPIV---W----YGTAAQKQKYLPKLATGEWIGAYALSESSSAS 161 Query: 210 DIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGS 266 D ++ +DG Y L+G K W +S +D F + A+V+G + FL+ R G+ Sbjct: 162 DAMNCRTRAVLSADGTHYVLNGEKMWITNSGFADLFTVFAKVDGEKFSAFLIER----GT 217 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 P G ++K+G R ++T L ++ LLG++ ++ + Sbjct: 218 P-GFAVGAEEHKLGIRGSSTCPLILADCQVPVENLLGEIGKGHHIAFNILNIGRFKLGAA 276 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-- 381 V G R L +AI YA+ R G + + +++ +A+ A I A A+ +R D Sbjct: 277 CVGGARNGLQDAIGYAKERKAFGKSISEFGLIQEKLAESAAGIYAGEAMVYRAIGMIDAA 336 Query: 382 -------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 E + R EE A + I K W +M V+ ++ G GY+EE Sbjct: 337 LADVDTKAEGASREIQKRIEEYA---VECSILKVWASEMLDMVVDHVVQIYAGYGYVEEY 393 Query: 429 SIARHYRESPANSILLGS 446 R YR+S N I G+ Sbjct: 394 PAERAYRDSRINRIFEGT 411 >gi|326476534|gb|EGE00544.1| glutaryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818] Length = 432 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 29/247 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 170 FGLTEPNHGSDPGSMETVARPHPTKKGFYALSGTKTWITNSPISDAFLVWAKLDGKIRGF 229 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 ++ R D P G L +KNK R++ T ++ N + ++ GP Sbjct: 230 VLER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 282 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 283 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 340 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T + ++A DE K+ E M + K C A A E GG+ + Sbjct: 341 AYGTLAAVQVARLKDEGKAVPE-------MISMIKRQNCDRALAGSRTLQEIFGGNAASD 393 Query: 427 ERSIARH 433 E I RH Sbjct: 394 EYHIGRH 400 >gi|260910060|ref|ZP_05916742.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295] gi|260635828|gb|EEX53836.1| acyl-CoA dehydrogenase [Prevotella sp. oral taxon 472 str. F0295] Length = 569 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 32/328 (9%) Query: 198 IGLGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ +A+ DG + ++G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSAMLKATYSEKDGCWLINGVKRFITNGDSDIHLVLARSEAGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + + L G+ + G ++ + L Sbjct: 231 RGLSMFIYDKRQGGVTVRHIENKLGIHGSPTCELVYKDAKAELCGETRL--GLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E ++YAR R +ID P + ++ + + A ++ Sbjct: 289 MNGARLGIAAQSVGVSQAAYTEGLNYARERRQFETNIIDFPAVYDMLSRMKAKLDAGRSI 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D K+ R+E+ Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDIYKALDDIARERKLTPEERAEQKKYMRLADAFTPLAKGMNSEYANQNAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 ++ GGSG+I E R YR++ SI G+ V+ + + GT L + LE+D Sbjct: 409 IQIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL-GIMKEMLEED 467 Query: 476 LGSSGK-------KVITILRDSISLCKE 496 + S K K++ +S++ KE Sbjct: 468 VADSLKSLKERVAKLVERYEESVNNVKE 495 >gi|169796342|ref|YP_001714135.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213156922|ref|YP_002318967.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215483803|ref|YP_002326028.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|301346103|ref|ZP_07226844.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB056] gi|301511201|ref|ZP_07236438.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB058] gi|301595047|ref|ZP_07240055.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB059] gi|332852002|ref|ZP_08433869.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332871754|ref|ZP_08440194.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|169149269|emb|CAM87152.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213056082|gb|ACJ40984.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213987087|gb|ACJ57386.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|332729579|gb|EGJ60917.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332731224|gb|EGJ62522.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 600 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 153/358 (42%), Gaps = 49/358 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC 255 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ + VG Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPVGT 225 Query: 256 -----FLVPRL-------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 F+VP+ LED N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVDDEGNLED--RNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPEN 283 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ------- 352 + + +A+ ++ +S A+ YA+ R +SG D+ Sbjct: 284 RGLNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIV 343 Query: 353 -PVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCC 405 P ++ + AL++ LA D E+ + E+ ++ + PI K + Sbjct: 344 HPAVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLT 403 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------N 456 + ++ GG G+I E + + R++ +++ G+ LD+L Sbjct: 404 ESGNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGK 463 Query: 457 LLEKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 LL+ T+L +Q S + + L +K+ + + +SL K A+ E+I AS Sbjct: 464 LLKNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEEAKHNPEEIGAAS 521 >gi|194214228|ref|XP_001914880.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Equus caballus] Length = 408 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 148 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNSWEASATVVFASTDRSLQNKGI 206 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 207 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGFK 258 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A ++YA R G L ++ +AD+AL + Sbjct: 259 IAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALALE 318 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++EAA A++ A + A A+ +A++ +GG GY+ E Sbjct: 319 SARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 371 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 RHYR++ I G+ L + L K Sbjct: 372 MPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 404 >gi|15599394|ref|NP_252888.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|9950410|gb|AAG07586.1|AE004836_5 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] Length = 593 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|121604132|ref|YP_981461.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593101|gb|ABM36540.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 596 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 138/286 (48%), Gaps = 44/286 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+AA+ S+ + +DG Y + G K F++ D ++LA+ G Sbjct: 161 MNLTEPQAGSDLAAVRSRAEPQADGSYKVFGTKIFITYGEHDMAENIVHLVLARASGAPE 220 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+ L + G N + +++K+G +++ T L+F + G+L+G Sbjct: 221 GVKGISLFVVPKFLVNADGTLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAAGYLVG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILID 351 + N +E M I ++SA +V +++AE A+ +A+ R V G I Sbjct: 281 EENRG---LEYM--FIMMNSARYAVGVQGIAIAERAYQKAVGFAKDRVQSRPVDGSIKAS 335 Query: 352 QPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 P++ RA + +A+ A ++ + +A+ R + A+ M P+ Sbjct: 336 APIIHHPDVRRMLMTMRAYTEGCRAMASVAAAAYDATHHHPDAEVRKQSLAFYEFMVPLV 395 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + +M+ V + ++ GG G+IEE A+++R++ +I G+ Sbjct: 396 KGYSTEMSQEVTSLGVQVHGGMGFIEETGAAQYFRDARILTIYEGT 441 >gi|330900801|gb|EGH32220.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 491 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGSYRLRGNKIFISCGDHSLSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 A V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGQRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G LN + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGESEDDR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N+I G+ Sbjct: 385 RHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|229079713|ref|ZP_04212246.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2] gi|228703553|gb|EEL56006.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-2] Length = 371 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 160 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 161 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 269 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359 >gi|257065599|ref|YP_003151855.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256797479|gb|ACV28134.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM 20548] Length = 642 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 18/268 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K G GLTE+ G+D + + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKLGGFGLTEENAGSDAGGTETTAELDGDN-YILNGKKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F N + N+ Sbjct: 172 TTPGIGTHGISAFIVEKDFEGFTFSDHYDKLGIRSSSTAELHFENV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + + + A+ YA+ R G + +AD+ Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGLPIAHLQANTFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A + ++ A + + S EAA A+ +A +A + EA++ GGS Sbjct: 289 ATQLHGARLMIYQAAELKENHERYSAEAAMAKQVA-------SDLAMKISTEAVQIYGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G+I+ + R +R++ I G+ M Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369 >gi|77735757|ref|NP_001029573.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] gi|122144069|sp|Q3ZBF6|ACADS_BOVIN RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor gi|73587179|gb|AAI03366.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Bos taurus] Length = 412 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 33/250 (13%) Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + LSG K W ++ + A ++ A + + FLVP GL + ++K+ Sbjct: 177 WVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPM-----PTPGLTLGKKEDKL 231 Query: 280 GNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335 G R+++T L F + LLG+ P KI + LD+ + ++ + +A+A Sbjct: 232 GIRASSTANLIFEDRRIPKDSLLGE------PGLGFKIAMQTLDTGRIGIASQALGIAQA 285 Query: 336 -----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 + YA R G L ++ +AD+AL + +A L++R A D K ++EA Sbjct: 286 ALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEA 345 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A A++ A + A A+ +AM+ +GG GY++E RHYR++ I G+ Sbjct: 346 AMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQ 398 Query: 451 VLDVLNLLEK 460 L V L K Sbjct: 399 RLVVAGHLLK 408 >gi|296387250|ref|ZP_06876749.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 593 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVASDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|47569766|ref|ZP_00240438.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] gi|206975851|ref|ZP_03236762.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|217962830|ref|YP_002341408.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|222098813|ref|YP_002532871.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] gi|228988568|ref|ZP_04148655.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229142084|ref|ZP_04270609.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|47553562|gb|EAL11941.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] gi|206745945|gb|EDZ57341.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|217064522|gb|ACJ78772.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|221242872|gb|ACM15582.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] gi|228641373|gb|EEK97679.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|228771185|gb|EEM19664.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|324329291|gb|ADY24551.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|256544645|ref|ZP_05472017.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170] gi|256399534|gb|EEU13139.1| butyryl-CoA dehydrogenase [Anaerococcus vaginalis ATCC 51170] Length = 643 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 18/269 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE+ G+D + + DG Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAELDLDGKRYILNGKKIFITNAPKADTYVVFA 172 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +G + + + G +K+G RS+ T EL F N + N+ Sbjct: 173 VTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGIRSSCTAELHFDNV---KVPKENLLGK 229 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++ + + + A+ YA+ R G + +AD Sbjct: 230 EGQGFKIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGMPIAHLQANTFKLAD 289 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A ++ AA + + A + + S +AA A K + +A + EA++ GG Sbjct: 290 MATNLKAARLMIYSAAELKENHERYSADAAMA-------KQFASDLASKITNEALQLYGG 342 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 SG+I+ + R YR+S I G+ M Sbjct: 343 SGFIKGIDVERFYRDSKITQIYEGTNEIM 371 >gi|239503645|ref|ZP_04662955.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] Length = 600 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A++YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALNYAKERLAMRSLSGPKYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q S + + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521 >gi|229076555|ref|ZP_04209515.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] gi|229118836|ref|ZP_04248185.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228664637|gb|EEL20130.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228706588|gb|EEL58801.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|170723991|ref|YP_001751679.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169761994|gb|ACA75310.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 601 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYRISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G NG+ +++K+G NAT + F + G+L+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVTCGSIEHKMGIHGNATCVMNFDSATGYLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ + YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A+ + A D + + R + A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|94984843|ref|YP_604207.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] gi|94555124|gb|ABF45038.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 22/266 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 P+ + L+E G+D AA+++ + DG + ++G K W + ++D ++ A Sbjct: 113 PLTEKPALAAFALSEPNNGSDAAAMSTTA--VLDGDEWVINGTKMWISNGGVADITVVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300 + G L+ G + ++K+K+G R++ T EL F N G + Sbjct: 171 TTNRQGGHRATVALVVPKDAPGFSFNKIKHKMGQRASLTSELVFENVRVPKENQLGGVGD 230 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ ++ +I + A SV R +L E++ YA++R G + ++ +A Sbjct: 231 GFKIAMKTLDKTRIPV----AAGSVGVARRALEESLKYAKQREAFGQPIAQFQAIQFKLA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A+ I ++++ A D+ E+A I K +C +MA EA++ G Sbjct: 287 EMAMGIETGRLMTWKAAWLVDQGLPHGYESA-------IAKAYCSEMAFDAANEAIQIHG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ E + + R+ N I G+ Sbjct: 340 GYGYVGEYPVEKLLRDVKLNQIYEGT 365 >gi|251779239|ref|ZP_04822159.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083554|gb|EES49444.1| acyl-coA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 636 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE G+D ++ + DG Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVLDGDYYILNGGKIFITNADKADTYVVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 171 VTTPDIGVRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++ + +A+ A+ Y++ R G + Q V+ +AD Sbjct: 228 EGQGFKISMQTLDGGRIGIASQALGIAQGAYENALEYSKERVQFGKPICQQQVISFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I AA L + A + +S S EAA A K + + V+ ++++ GG Sbjct: 288 MATKIRAARLLVYSAAELKENHESYSMEAAMA-------KQYASDICLEVVNDSLQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 NGYLKGMDVERAYRDAKICTIYEGT 365 >gi|212696807|ref|ZP_03304935.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM 7454] gi|325847079|ref|ZP_08169905.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212676097|gb|EEB35704.1| hypothetical protein ANHYDRO_01369 [Anaerococcus hydrogenalis DSM 7454] gi|325481051|gb|EGC84096.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 643 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 18/269 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE+ G+D + + DG Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSDAGGTETTAELDLDGERYILNGKKIFITNAPKADTYVVFA 172 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +G + + + G +K+G RS+ T EL F N + N+ Sbjct: 173 VTTPGIGTHGISAFIVEKGMEGFTCSDHYDKLGIRSSCTAELHFDNV---KVPKENLLGK 229 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++ + +A+ A+ YA+ R G + +AD Sbjct: 230 EGQGFKIAMATLDGGRIGIASQALGIAQGAYESALSYAKEREQFGMPIAHLQANTFKLAD 289 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA + + A + + S +AA A K + +A + EA++ GG Sbjct: 290 MATYLKAARLMIYSAAEMKENHERYSADAAMA-------KQFASDLASKITNEALQMYGG 342 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 SG+I+ + R YR+S I G+ M Sbjct: 343 SGFIKGIDVERFYRDSKITQIYEGTNEIM 371 >gi|299069056|emb|CBJ40307.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum CMR15] Length = 392 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252 I LTE G+D AA+ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAAALQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGAEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISAFIVP-----ADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YAR R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYARERRQFGQPIADFQLIQAMLADSQT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A+ +D AK + ++A K +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCAHRYD-AKPAGKPDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 + E + R YR+ Sbjct: 349 VAEYKVERFYRD 360 >gi|254483196|ref|ZP_05096429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214036567|gb|EEB77241.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 383 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 36/335 (10%) Query: 142 LMAQLEAGHLMSPSVT-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L+AQ E G SV S ++ M TP + + S E P + + Sbjct: 69 LVAQEEWGSASHGSVPLSIAVQTDMATPAL-----ARFGSDELKRNFLTPAIAGDMVTSI 123 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRVG 254 G++E G+D+AAI + K D Y ++G K W +S +D +LA Q Sbjct: 124 GVSEPHAGSDVAAIKTTAIKRGDD-YVINGTKMWITNSTQADYICLLANTSDDQKHVNKS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 +VP + G L NK+G R++ T +L F + +L+G+ G Sbjct: 183 LIIVPTDVP-----GFSTSSLLNKLGMRASDTAQLFFDDVVVPQRYLIGE----EGKGFT 233 Query: 312 MKILIYLDSAI----MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +++ + + I +++ G+ + E I Y +R G L++ ++ +A++ ++I Sbjct: 234 YQMMQFQEERIAGSAITIKGLENCINETIEYTSQRQAFGKPLLNNQIVNMKLAEMQMEIE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + AL++R ++ + A+YA++ A K+ ++ E ++ GG GY+ + Sbjct: 294 SLRALTYRACETYINGGDPTLLASYAKLKA-------GKLCNSIPTECLQFWGGMGYMWD 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + R R+ SI G+ M+ + ++ GT Sbjct: 347 NPVGRAMRDMRLTSIGGGADEVMLGIIGKMMGLGT 381 >gi|228930350|ref|ZP_04093354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829336|gb|EEM74969.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|196043351|ref|ZP_03110589.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|196025660|gb|EDX64329.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] Length = 381 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|114706901|ref|ZP_01439801.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506] gi|114537849|gb|EAU40973.1| probable acyl-CoA dehydrogenase [Fulvimarina pelagi HTCC2506] Length = 604 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 99/433 (22%), Positives = 176/433 (40%), Gaps = 79/433 (18%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G + P++T ++ AL H+ + + SR D T + LTE + G Sbjct: 120 GFAIGPTLTVGAIEAL------HQHGSEDLRSRYLDKLVSGEWTGT-----MNLTEPQAG 168 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 +D++ I ++ + DG Y + G K +++ D ++LA++ G + FL Sbjct: 169 SDLSGIKTRAEPAGDGTYRIFGQKIYITYGEQDFTDNIVHLVLARLPGAPEGVKGISLFL 228 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---------TFGFLLGDLN 303 VP+ L + G+ N + L+ K+G + T + + + G+L+G+ N Sbjct: 229 VPKFLVNDDLSLGARNDVFCAALEKKLGIHGSPTCTMIYGDDKGETGEPGAIGWLIGEEN 288 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------VSGGI--------L 349 + M L AI V + +A+ +AR R ++ G + Sbjct: 289 RGLACMFTMMNNARLLVAIQGVGIAEAATQKALEFARDRRQGRSTRLAKGAEPKGQMAPI 348 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--SRSEEAAYAR-------IMAPIT 400 +D P + R + + AA A+S+ ++ D AK +R+ + A+ ++ P+ Sbjct: 349 VDHPDVTRMLLTMKALTGAARAISYACGHAGDMAKHHARAGDGDAAKSWKDRVDLLTPVA 408 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + V ++ GG GY+EE A+ R++ I G+ +D++ Sbjct: 409 KAFSTDVGVEVAGLGVQVHGGMGYVEETGAAKLLRDARIAPIYEGTNGIQAIDLVTRKIG 468 Query: 458 LEKG---TNLFEQLFSTLEQ-------DLGSSGKKVITILRDSISLCKEDKGLARFLTEK 507 L G TN +L S LE D G S + LR E + RFL+E Sbjct: 469 LSGGGAVTNYILELRSVLETLEARNLPDFGRSASMIDAALR-------ELEASTRFLSEA 521 Query: 508 IALASSAAALYRA 520 IA AL A Sbjct: 522 IARGERETALAGA 534 >gi|229017861|ref|ZP_04174744.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273] gi|229024064|ref|ZP_04180538.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228737242|gb|EEL87763.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228743452|gb|EEL93569.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1273] Length = 381 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGVEDNGRKRISAFIVPTTSE-----GLTITSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|195054501|ref|XP_001994163.1| GH16400 [Drosophila grimshawi] gi|193896033|gb|EDV94899.1| GH16400 [Drosophila grimshawi] Length = 406 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D Y L+G K W ++ ++A I+ A + + Sbjct: 146 FALSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNAFEAEASIVFATTNKQLKHKGI 204 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+VP+ ++ G + ++K+G R ++T +L F + LLG + Sbjct: 205 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKESLLGTAGLG----- 254 Query: 311 DMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD+ + ++G + +A+A + YA++R G + +++ IAD++L Sbjct: 255 -FKIAMKTLDAGRIGIAGQALGIAQASLEVAVDYAQKRQSFGKPISKLQAIQQKIADMSL 313 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D+ S ++EAA A++ A C + ++ +GG GY Sbjct: 314 AVESARLLTWRAAWLKDQKMSYTKEAAMAKLAASEAATLCAH-------QCIQILGGMGY 366 Query: 425 IEERSIARHYRESPANSILLGS 446 + + S RHYR++ I G+ Sbjct: 367 VTDMSAERHYRDARITEIYEGT 388 >gi|187934827|ref|YP_001886181.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum B str. Eklund 17B] gi|187722980|gb|ACD24201.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum B str. Eklund 17B] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + +K D Y L+G K F+++ P+S+ F++ A + G + Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G ++++K G +S EL F N L+G G MK+L Sbjct: 182 SAFIVEKEFEGFSIGKIEDKCGIKSAQVSELIFENCKVPAENLVGAEGKGFGIA--MKVL 239 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D + V+ + +AE A Y + R G L + +A++ L+I A Sbjct: 240 ---DGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAK 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + ++ A E + S AA A++ C +A V EA++ +GG+GY++E ++ Sbjct: 297 YILYKAAMDKQEGRQYSVSAAKAKLS-------CTDVAMKVTVEAVQMLGGNGYMKEYNV 349 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 350 ERMMRDAKITQIYEGT 365 >gi|325271494|ref|ZP_08138012.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324103384|gb|EGC00713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 601 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMAENIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G NG+ +++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ + YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A+ + A D + + R + A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|311104902|ref|YP_003977755.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310759591|gb|ADP15040.1| acyl-CoA dehydrogenase, N-terminal domain protein 5 [Achromobacter xylosoxidans A8] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 13/264 (4%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249 M + + + +TE G+D+ AI + K G Y ++G K F+++ +D +++A+ Sbjct: 117 MAQGDIVASIAMTEPGAGSDVKAIRTAAAKAQGG-YVINGQKTFITNGFHADRVLVVAKT 175 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + G + D + G RL +K+G ++ T EL F + F +LG+ Sbjct: 176 DPAAGARGISLFWVDAATPGFTRGRLLDKVGQKAQDTAELFFQDMFVPDEDMLGEPGQGF 235 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G + + L A+ + +L + Y + R LID ++ +ADI Sbjct: 236 GYLMKELVRERLMIAVRCAMALESALQWTVDYTKDRRAFDKALIDNQHIRFKLADIKTLA 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A + + + + AA A++ W + A + I + ++ GG GY+ Sbjct: 296 AATRAFVDGCVQQYLDGELDAGGAAMAKL-------WASE-ATSAIDDLLQFHGGYGYMR 347 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 E IAR Y + N I G+ M Sbjct: 348 EYPIARAYTDVRPNRIYGGASEVM 371 >gi|229099774|ref|ZP_04230699.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] gi|228683663|gb|EEL37616.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|149918910|ref|ZP_01907396.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] gi|149820284|gb|EDM79701.1| probable acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] Length = 374 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 27/314 (8%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNK---APMQKTSVAIGLGLTEKRG 207 L+S +T A L+ H P I + + + P+ I L +TE G Sbjct: 61 LVSEELTRAGSGGLIAGLMSHGIGLPPIIALGSEALKERIAPPVIAGEAIIALAVTEPSG 120 Query: 208 GTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+A I ++ +K+ +G Y + G K F++S + ++ A G G V L Sbjct: 121 GSDVANIQTKARKVGEGDEARYIVDGAKTFITSGVRADWLTTAVRTGGEGMGGVSLLAIP 180 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321 G G+ L +K+G + T + F N L+G N M I++ ++ Sbjct: 181 GDAEGVSRAPL-DKMGWHCSDTAAIYFDNVEVPASNLIGFENAGF-----MGIMVNFNNE 234 Query: 322 IMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 M ++ M R+ EA +A++R G L+ V++ + D+A I A + L Sbjct: 235 RMMLAAMALGFARLCFEEAADWAQQRETFGKPLVRHQVVRHKLVDMATSIRAVECVLDDL 294 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A D + E A+ +A C K EA++ +GG+GYI R YRE Sbjct: 295 AWRIDRGEQPIAEVCMAKNLATQCVELCAK-------EAVQILGGAGYIVGTHCERIYRE 347 Query: 437 SPANSILLGSGNAM 450 + SI G+ M Sbjct: 348 TKVLSIGGGAEEIM 361 >gi|152985377|ref|YP_001346004.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150960535|gb|ABR82560.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 592 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP++L + G N L +++K+G +++AT + F G+L+G++N Sbjct: 226 KGISLFLVPKVLVNADGSLGERNSLGCGSIEHKMGIKASATCVMNFDGATGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I ++ S AI YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R ++ P+ K + M Sbjct: 346 DVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDM 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG G+I E + R+ I G+ LD++ Sbjct: 406 GLETTLHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLVG 454 >gi|228936626|ref|ZP_04099420.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229199466|ref|ZP_04326129.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] gi|228584042|gb|EEK42197.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] gi|228823061|gb|EEM68899.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|188587652|ref|YP_001921196.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum E3 str. Alaska E43] gi|188497933|gb|ACD51069.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum E3 str. Alaska E43] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + +K D Y L+G K F+++ P+S+ F++ A + G + Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G +++NK G +S EL F N + N+ + I + Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENC---KVPAENLVGAEGKGFGIAMKA 238 Query: 318 LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AE Y + R G L + +A++ L+I A + Sbjct: 239 LDGGRIGVAAQGLGIAEGAFDIVKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAKYI 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E ++ S AA A++ C +A V EA++ +GG+GY++E ++ R Sbjct: 299 LYKAAMDKQEGRTYSVSAAKAKLS-------CTDVAMKVTVEAVQMLGGNGYMKEYNVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKITQIYEGT 365 >gi|194363976|ref|YP_002026586.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194346780|gb|ACF49903.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 387 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLRADKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDMAAGAKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G RS+ T EL F N G + G + V ++ Sbjct: 187 TAFLVEKGMKGFSTAQKLDKLGMRSSPTCELVFQDCEVPEENVLGQVGGGVRVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ + + M V + Y RH G + +++ IAD+ + + A A Sbjct: 247 ERVVLSGGPLGLMAAAMDVVMP----YVHERHQFGEAIGSFQLIQAKIADMYVGLGACRA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D+ ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 303 YVYAVARACDQGRTTRQDAAGAILYAAEKATW-------LTGQAIQILGGNGYINEYPTG 355 Query: 432 RHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 356 RLWRDAKLYEIGAGT 370 >gi|1168286|sp|P15651|ACADS_RAT RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor Length = 412 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ ++ D + L+G K W +S + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA RH G L ++ +AD+AL + Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++E+A A++ A + A A+ +A++ +GG GY+ E Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 375 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 376 MPAERYYRDARITEIYEGT 394 >gi|254255643|ref|ZP_04948959.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] gi|124901380|gb|EAY72130.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] Length = 596 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGTDEQKQRYVPKLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + S+ + DG Y + G K F++ D ++LA+ EG G F+V Sbjct: 171 DLALVRSRAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARTPNAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L++ + G+L+G+ N +E Sbjct: 231 PKFLVNDDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI---------LIDQPVMKR- 357 M I++ + + G+ V+ +A +A+ R S + +I P ++R Sbjct: 288 YMFIMMNAARFGVGMQGIGVADRAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVRRM 347 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 A+ + A +A A +A+ + +R+ A + PI K W +M V Sbjct: 348 LGTMRALTEGARALAYVAAAHSDIAHRHADDATRAHHQAIYEYLVPIVKGWSTEMVNDVA 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|330951405|gb|EGH51665.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae Cit 7] Length = 600 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G LN + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N+I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNAIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|323490854|ref|ZP_08096052.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus donghaensis MPA1U2] gi|323395462|gb|EGA88310.1| acyl-CoA dehydrogenase domain-containing protein [Planococcus donghaensis MPA1U2] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 34/286 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + + GLTE G+D A+ + ++ D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGTKIGAYGLTEPASGSDAGAMRTSAKEDGDH-YVLNGSKIFITNGGIADIYIVFAV 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F++ + E G + + K+G RS+ T E+ F N +LG Sbjct: 172 TDPESKHKGTTAFIIEKDFE-----GFSVGKKERKLGIRSSPTTEIIFDNCRVPKENVLG 226 Query: 301 DLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 +L + KI + LD ++ V +A+ +I YA+ R G ++ Sbjct: 227 ELG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASIDYAKEREQFGKPIVANQG 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A I A+ L+++ A S S+E+A A++MA T A V E Sbjct: 281 VSFKLADMATSIEASRLLTYQAAWLESNKLSYSKESAMAKLMAGDT-------AMKVTVE 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A++ GG GY ++ + R+ R++ I G+ L + ++ K Sbjct: 334 AVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEVQRLVISRMVTK 379 >gi|154303962|ref|XP_001552387.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10] gi|150854449|gb|EDN29641.1| hypothetical protein BC1G_08865 [Botryotinia fuckeliana B05.10] Length = 430 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 27/267 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K+ DG Y L G K W + P +D ++ A+ E G + Sbjct: 166 LAMSESGAGSDVVSMRTTAKKV-DGGYVLDGTKMWITNGPDADVIVVYAKTEPEKGSKGI 224 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G R +K+G R + T EL F F +LG++N +K+L Sbjct: 225 TAFLVEKGFKGFSCARKLDKMGMRGSNTGELVFEGVFVPEENILGEVN------RGVKVL 278 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +S M+ +L A+ + +R G + +++ +AD+ + A+ Sbjct: 279 MEGLDIERLVLSAGPLGIMQAALDVALPFTHQRKQFGQPIAHNQLVQGKLADMYTKLQAS 338 Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A ++ A + DE + R+++ A A IM + + A V + ++ +GG GY+EE Sbjct: 339 RAYTYDTARTVDETGNIRTQDCAGA-IM------YAAERATEVSLDCIQLLGGMGYVEEM 391 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455 +R R++ I G+G V V+ Sbjct: 392 PASRLLRDAKLYEI--GAGTTEVRKVV 416 >gi|50083857|ref|YP_045367.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49529833|emb|CAG67545.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 625 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I S+ + DG Y +SG K F+S+ D I+LA++ G Sbjct: 191 LTESHAGSDLGIIRSKAEPNEDGSYAISGEKIFISAGEHDMADNIIHIVLARLPGAPKGT 250 Query: 253 --VGCFLVPRLL--EDGSPNGLCYQR---LKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L EDGS + R +++K+G NAT + F G+L+G N Sbjct: 251 KGISLFIVPKFLVNEDGSLGERNHVRCGSIEHKMGIHGNATCVINFDRAKGYLIGPENRG 310 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 311 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKDRLAMRSLSGPKAPEKDADPIIVHP 370 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 371 AVRNMLLTQKAFAEGGRALVYLLAQYADVVEHGITEEERKFADNILSLLTPIAKAFLTET 430 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 431 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 478 >gi|87118372|ref|ZP_01074271.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121] gi|86166006|gb|EAQ67272.1| acyl-CoA dehydrogenase, putative [Marinomonas sp. MED121] Length = 599 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 49/335 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGLLKTKAEPQADGSYAISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ D NG+ +++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKFNVDDQGEAADRNGVACGSIEHKMGIHGNATCVMNFDGAKGYLIGPENKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ +L ++ YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHSEWALQNSVSYARDRLQMRALSGPKAPEKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYA----RIMAPITKYWCCKMA 408 ++R + AL + D K S +E A+A ++ PI K + + Sbjct: 345 DVRRMLLTQKAFAEGGRALIHYCSMLVDITKKGSPDEKAHADELMSLLTPIAKAFLTETG 404 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 M+ GG G+I E + ++ R+ + + G+ LD+L Sbjct: 405 YEAANLGMQVYGGHGFISEWGMEQNVRDCRISMLYEGTTGIQALDLLG------------ 452 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 + L S GK + T + CKE KG RF Sbjct: 453 ----RKVLMSQGKTLKTFTKIIHKFCKEHKGDKRF 483 >gi|254242880|ref|ZP_04936202.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192] gi|126196258|gb|EAZ60321.1| hypothetical protein PA2G_03650 [Pseudomonas aeruginosa 2192] Length = 593 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|167031196|ref|YP_001666427.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166857684|gb|ABY96091.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 393 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDEGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPDENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|150019353|ref|YP_001311607.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905818|gb|ABR36651.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + K + Y L+G K F+++ P+S+ F++ A + G + Sbjct: 123 FGLTEPNAGSDAGGCITTADKNGE-YYILNGAKCFITNGPLSETFLVFALTDKSKGAKGL 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313 + + G +++NK G RS EL F N PVE++ Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIRSAQVSELVFENC-----------KVPVENLVGAEGK 230 Query: 314 ----ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + V+ + +AE A Y + R G L + +A++ L Sbjct: 231 GFGIAMKTLDGGRIGVAAQGLGIAEGAFEVAKQYMKEREQFGKPLWKNQYLAFKMAELEL 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A + ++ A E K S AA A++ C A V EA++ +GG+GY Sbjct: 291 EIEQAKYMVYKAAMDKQEGKPYSVSAAKAKLA-------CTDAAMHVTTEAVQMLGGNGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 + E ++ R R++ I G+ Sbjct: 344 MREYNVERMMRDAKITQIYEGT 365 >gi|307544734|ref|YP_003897213.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] gi|307216758|emb|CBV42028.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] Length = 603 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE GTD+ I ++ D Y LSG K F+S+ D ++LA++ Sbjct: 165 LTEPHCGTDLGLIKTRAVPNDDDSYTLSGTKIFISAGDHDLAENIVHLVLAKLPDAPAGS 224 Query: 251 GRVGCFLVPRLLED--GSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L D G+P NG+ L++K+G NAT + F GFL+G + Sbjct: 225 KGISLFVVPKFLPDADGNPGERNGVSCGSLEHKMGIHGNATCVMNFDGARGFLVGKPHKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353 + M + I + S A+ YAR R +SG D+P Sbjct: 285 LACMFTMMNAARIGVGIQGLGLTEASFQNALAYARDRLQMRALSGAKAEDKPADPIIVHP 344 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + ++A A+ + A + D+ + ++ PI K + ++ Sbjct: 345 DVRRMLLTQKAFAEGGRMLVLYAAQMVDVVERSDDTEQTERAETLLGLLTPIVKAFLTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 E ++ GG G+I+E + + R++ + G+ LD+L L+ +G L Sbjct: 405 GFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETL 464 >gi|158522377|ref|YP_001530247.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511203|gb|ABW68170.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 601 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 62/376 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 + +V + T + + K+++ E+ T + LTE G+D+ A+T+ Sbjct: 133 AGRLVEVFGTQEQKETYLKKLYTGEWSGT-------------MLLTEAEAGSDVGALTTT 179 Query: 218 GQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RLLED 264 K DG Y +SG K F+S M++ I +LA++EG + FLVP R+ D Sbjct: 180 AVKNPDGTYSISGSKIFISGGEHDMTENIIHPVLARIEGAPPGTRGISLFLVPKYRVNAD 239 Query: 265 GSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318 GS N + ++ K+G ++T L G LLG N + M L Sbjct: 240 GSLGDFNDVVCTGIEEKMGIHGSSTCSLTLGGKGKCIGTLLGQENKGMSAMFVMMNEARL 299 Query: 319 DSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIALDI 366 + + S A++YA+ R V G +I P ++R + ++ + + Sbjct: 300 LVGMQAFGCATASYMSALNYAKERIQGRPLTAGKDASVGGVPIIRHPDVRRQLMNMKVMV 359 Query: 367 AAATALSFRLANSFDE---AKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIG 420 +L + + D A + E+ Y I+ PI K + A V + ++ G Sbjct: 360 EGMRSLHYYVGYCQDMAVLAGTEEEKEKYEGLVDILTPIAKGYGTDKAFEVCSHGVQVYG 419 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT---NLFEQLFSTLEQ 474 G GY +E + ++ R+ I G+ +D+ ++KG +LF ++ T+ Sbjct: 420 GYGYTKEYPVEQYLRDCRITMIYEGTNGIQAMDLFGRKMTMKKGKLVMDLFGEIMKTV-- 477 Query: 475 DLGSSGKKVITILRDS 490 + K I L+D+ Sbjct: 478 ----NAAKAIDSLKDA 489 >gi|104783924|ref|YP_610422.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95112911|emb|CAK17639.1| probable acyl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 598 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 46/307 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ +A I ++ + DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAGDGTYRLKGNKIFISGGDHELSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L + G N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYLVNVDGSLGQRNDVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 + G+L+G + + M +I + + + ++ +G SL YAR+R Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----DYARQRPQG 326 Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 H +I+ +KR + + A L A FD+ + ++E A + Sbjct: 327 RLPDNKDPHSPAVPIIEHSDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENARRQ 386 Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W A++ +GG GY E + ++YR++ N I G+ Sbjct: 387 ALELLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446 Query: 449 AMVLDVL 455 LD+L Sbjct: 447 IQSLDLL 453 >gi|295675629|ref|YP_003604153.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295435472|gb|ADG14642.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 396 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 18/240 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ DG Y LSG K W +SP++D F++ A++E + Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITNSPIADVFVVWAKLEENGKDNIR 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +LE G GL + K+G R++ T E+ + F + + N+ G L Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDDVF---VPEENIMPGVSGLRGPFTCL 251 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATALS 373 +SA ++ + AEA + R++V G L ++++ +AD+ +I Sbjct: 252 NSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL DE + +E + I K C A + A + +GG+G +E +ARH Sbjct: 312 LRLGRMKDEGTAATE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARH 364 >gi|229030226|ref|ZP_04186283.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271] gi|228731070|gb|EEL81995.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH1271] Length = 381 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|148652112|ref|YP_001279205.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571196|gb|ABQ93255.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 388 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 20/258 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG--IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++T++ K DG Y LSG K F+S S +++ G G V Sbjct: 124 LTEPNAGSDAGSLTTKAVK-QDGEDYYLLSGEKTFISGAGSTDILVVMARTGDAGPKGVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312 + D G+ Y + ++K+G ++ T + F N G + ++ Sbjct: 183 AFVVDAHSEGISYGKNEHKMGWKAQPTRTIHFKDVKVPAKNLLGSEGEGFKFAMKGLDGG 242 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I I +V + +L A++Y + R G + + ++ +AD+ AA + Sbjct: 243 RINI----GICAVGTAQAALETALNYVQERKQFGSAIAELQSVQFKLADMLTQTIAARQM 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + AN D K S+ Y + K ++ AV EA++ GG GY+ E + R Sbjct: 299 LYLAANKVD--KKHSDATTYC----AMAKRLATDLSFAVANEALQLHGGYGYLNEYPLER 352 Query: 433 HYRESPANSILLGSGNAM 450 H R+ + IL G+ M Sbjct: 353 HVRDLRVHQILEGTNEIM 370 >gi|196041019|ref|ZP_03108316.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|196028187|gb|EDX66797.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] Length = 379 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTTGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|206971677|ref|ZP_03232627.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|218230994|ref|YP_002367222.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|218897497|ref|YP_002445908.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228901095|ref|ZP_04065301.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] gi|228952869|ref|ZP_04114938.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958775|ref|ZP_04120487.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229070017|ref|ZP_04203293.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185] gi|229150738|ref|ZP_04278952.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550] gi|229178865|ref|ZP_04306225.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W] gi|229193927|ref|ZP_04320840.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|206733662|gb|EDZ50834.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|218158951|gb|ACK58943.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|218546035|gb|ACK98429.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228589568|gb|EEK47474.1| Butyryl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228604630|gb|EEK62091.1| Butyryl-CoA dehydrogenase [Bacillus cereus 172560W] gi|228632825|gb|EEK89440.1| Butyryl-CoA dehydrogenase [Bacillus cereus m1550] gi|228713118|gb|EEL65017.1| Butyryl-CoA dehydrogenase [Bacillus cereus F65185] gi|228800914|gb|EEM47819.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228806825|gb|EEM53375.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228858546|gb|EEN03000.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] Length = 381 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|313109647|ref|ZP_07795591.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310882093|gb|EFQ40687.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 593 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|289422724|ref|ZP_06424564.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus anaerobius 653-L] gi|289156903|gb|EFD05528.1| acyl-coa dehydrogenase, short-chain specific [Peptostreptococcus anaerobius 653-L] Length = 380 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 22/266 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 P+ + + GLTE G+D A + + DG Y L+G K W ++P D I+ A Sbjct: 114 PLAEGTKVGAFGLTEPGAGSDAGATATTA--VLDGDHYILNGRKCWITNAPFCDFAIVTA 171 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD--- 301 E G + + + G + ++K+G R T +L F N LLG Sbjct: 172 VTEKGKGTKGISTFIVEAGWEGFSHGAHEDKMGIRGTRTSDLIFENVKVPKDNLLGKEGK 231 Query: 302 -LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 V +E +I + A +V + +L EAI Y + R G L + IA Sbjct: 232 GFVVMMNTLEAGRIGV----AAQAVGVAQSALDEAIKYTKERVQFGKPLSAFQNTQFTIA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A + AA L ++ A D+ KS + I + + K++ ++A V +A++ G Sbjct: 288 DMATKVEAARLLVYQAAQLKDDGKSPA-------IASSMAKFYAAEVANEVAYKALQLHG 340 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+++ I R YR++ SI G+ Sbjct: 341 GYGYVKDYRIERIYRDARILSIYEGT 366 >gi|107103716|ref|ZP_01367634.1| hypothetical protein PaerPA_01004787 [Pseudomonas aeruginosa PACS2] gi|116052236|ref|YP_788920.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889472|ref|YP_002438336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|115587457|gb|ABJ13472.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218769695|emb|CAW25455.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 593 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVARDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|262066901|ref|ZP_06026513.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693] gi|291379370|gb|EFE86888.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693] Length = 637 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F+++ +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A V+ +A++ GGS Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|228908265|ref|ZP_04072110.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|228921228|ref|ZP_04084557.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228939660|ref|ZP_04102242.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228965477|ref|ZP_04126563.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|228972521|ref|ZP_04133128.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979131|ref|ZP_04139478.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|229044240|ref|ZP_04191914.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676] gi|229109949|ref|ZP_04239530.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|229130893|ref|ZP_04259824.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|296503074|ref|YP_003664774.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171] gi|228652575|gb|EEL08482.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|228673516|gb|EEL28779.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|228725111|gb|EEL76394.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH676] gi|228780606|gb|EEM28826.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228787204|gb|EEM35176.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228794207|gb|EEM41725.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|228819998|gb|EEM66041.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228838443|gb|EEM83755.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228851306|gb|EEM96115.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|296324126|gb|ADH07054.1| Acyl-CoA dehydrogenase, short-chain [Bacillus thuringiensis BMB171] gi|326940251|gb|AEA16147.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar chinensis CT-43] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|168179253|ref|ZP_02613917.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum NCTC 2916] gi|226950255|ref|YP_002805346.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A2 str. Kyoto] gi|182669735|gb|EDT81711.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum NCTC 2916] gi|226840911|gb|ACO83577.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum A2 str. Kyoto] Length = 635 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTALLEGDHYILNGEKIFITNAGEADIYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + + + S G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNTGTRGISAFIVEKSFEGFSFGKHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQIISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A+ + + S EAA A K + + ++ +A++ GGS Sbjct: 289 VTKLRAARLLVYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYMKGMEVERAYRDAKICTIYEGT 365 >gi|121701011|ref|XP_001268770.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] gi|119396913|gb|EAW07344.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] Length = 437 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 35/301 (11%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 ++ K W PK+ T L+E G+D A+ ++ +K +DG Y L Sbjct: 159 QLKKTWLPKL--------------ATDTVGSFCLSEPASGSDAFALQTKAEKTADG-YKL 203 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 +G K W +S + FI+ A ++ G + ++E G+P G + + K+G R+++T Sbjct: 204 NGSKMWITNSMEAGVFIVFANLDPSKGYKGITAFVVEKGTP-GFSIAKKEKKLGIRASST 262 Query: 287 VELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 L F + G LLG+ + G + + +I I +++ G + A + Sbjct: 263 CVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAASYVWND 321 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 RR+ G ++ M+ +A ++IAAA AL + A + + ++AA A++ Sbjct: 322 RRQF--GQLIGTFQGMQHQLAQAYVEIAAARALLYNAARKKEAGQDFVQDAAMAKL---- 375 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++A V A+E +GG G++ E + +R+S +I G+ N + + LL+ Sbjct: 376 ---YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQ 432 Query: 460 K 460 K Sbjct: 433 K 433 >gi|320335137|ref|YP_004171848.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] gi|319756426|gb|ADV68183.1| Acyl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 22/267 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246 AP+ + L+E G+D AA+ + + DG + ++G K W + ++D ++ Sbjct: 112 APLVEKPALAAFALSEPNNGSDAAAMGTTA--VLDGDEWVINGTKMWISNGGVADITVVF 169 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299 A + G ++ G Y ++K+K+G R++ T EL F N G + Sbjct: 170 ATTDKNGGHKATVAIVVPKDAPGQSYNKIKHKLGQRASLTSELVFDNVRVPKDHILGGIG 229 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 ++ ++ +I + A SV R ++ E+I YA+ R G + ++ + Sbjct: 230 DGFKIAMKTLDKTRIPV----AAGSVGVARRAMEESIKYAKERAAFGKPIATFQAIQFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++A+ I +S + A D+ E+A I K +C +MA EA++ Sbjct: 286 AEMAMGIETGRLMSLKAAWLVDQGLPHGYESA-------IAKAYCSEMAFNAANEAIQVH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY+ E + + R+ N I G+ Sbjct: 339 GGYGYVGEYPVEKLLRDVKLNQIYEGT 365 >gi|229145127|ref|ZP_04273519.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|228638325|gb|EEK94763.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|86356551|ref|YP_468443.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86280653|gb|ABC89716.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 593 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 100/443 (22%), Positives = 187/443 (42%), Gaps = 67/443 (15%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L G G D +V W L R I G + Sbjct: 31 LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLVDGEVRLPDGWRDLYRSWISGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175 +F + H + A L + ++P++T ++ A+ + + + Sbjct: 91 LTAPEAFGG--QALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSAHGSAALKDKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE G+D+ + ++ ++ +DG Y +SG K F+ Sbjct: 149 AKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRISGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DGS N L L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + + + G+L+G+ N + M +++A ++V V+ Sbjct: 256 GIHGSPTCTMIYGDGRFGGEKGAIGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310 Query: 332 LAE-----AIHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALSFRLA 377 +AE A+ YAR R SG G+ +I+ P + R + + A A+SF A Sbjct: 311 IAEAATQKALAYARERTQGRAPGWSGPGMSPIIEHPDVARMLLTMKALTQGARAISFACA 370 Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++ D ++ + + + A ++ P+ K + V + ++ GG G+IEE AR+ Sbjct: 371 HAIDMSRRAGDTSRHWQERAALLTPVAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARY 430 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ I G+ +D++ Sbjct: 431 LRDARIAPIYEGTNGIQAIDLVT 453 >gi|312876071|ref|ZP_07736060.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797269|gb|EFR13609.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 395 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 34/285 (11%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 113 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 171 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + +D +++ A + G PR ++E G C ++ ++K+G R+++T EL Sbjct: 172 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 226 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 F + LLG TG + MK D V+ M V +A+ A+ YA+ R Sbjct: 227 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAVRYAKER 281 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401 G L ++ +AD+ ++I AA A+ + D AK S+E++ ++ A Sbjct: 282 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 338 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 339 ----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 379 >gi|239826721|ref|YP_002949345.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] gi|239807014|gb|ACS24079.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 43/298 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK S E + + +TE G+D+A I++ K D Y Sbjct: 103 TEEQKRKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGD-YY 148 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRL 275 ++G K F+++ + +++A C P ++E +P G R Sbjct: 149 IVNGQKTFITNGIHADLVVVA-------CKTNPNAQPPHKGISLLVVERDTP-GFTRGRK 200 Query: 276 KNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +K+G + T EL F++ LLG+ + + L AI + + V Sbjct: 201 LDKVGLHAQDTAELFFNDAKVPKENLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMF 260 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 Y ++R G + + ++ +A++A +IA R+ + K+ + Sbjct: 261 ELTKQYVKQRSAFGKRISEFQTVQFRLAEMATEIAIGRTFVDRVIEEHMQGKNVVTHVSM 320 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W +MA + AE+M+ GG GY+EE IAR YR+ P ++I G+ M Sbjct: 321 A-------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371 >gi|316966600|gb|EFV51153.1| acyl-CoA dehydrogenase [Trichinella spiralis] Length = 539 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/308 (20%), Positives = 142/308 (46%), Gaps = 38/308 (12%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLS 236 F E + P+ ++ + L+E + G+D A+ + ++ DG + ++G K W + Sbjct: 206 FGSESQKKHYLPLLESHMVGAFCLSEVQSGSDAFALKTFAKQ--DGTDFVINGTKMWITN 263 Query: 237 SPMSDAFIMLAQVEGR---------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 + +D F+++A + + CF V R L G+ + ++K+G R+++T Sbjct: 264 AEHADIFLVMATTDPSKVVYTGYKGISCFAVERALA-----GVSVGKKEDKLGIRASSTC 318 Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA 339 + N ++G + G ++IL + + ++ + +A+ I Y Sbjct: 319 PVHLDNVRVPMSAVVG--TIGQGYKYAIEIL---NEGRIGIAAQMIGIAQGCLDRTIPYL 373 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G + D M+ +AD+ ++ AA L++ + ++ ++AA A++ Sbjct: 374 KERKQFGRHIFDFQAMQHQVADMFTELEAARLLTYNAGRLLETGQTVVKQAAMAKL---- 429 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + +MA V + +E +GG G+I++ + ++YR+ +I G+ N + + +++ Sbjct: 430 ---YSSQMASKVTSRCIEWMGGVGFIKDYPVEKYYRDCKIGAIYEGTSNIQLNTIAKIID 486 Query: 460 KGTNLFEQ 467 K T L Q Sbjct: 487 KHTGLANQ 494 >gi|313238943|emb|CBY13932.1| unnamed protein product [Oikopleura dioica] Length = 402 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ K+ DG Y ++G K W ++ ++A ++ A + + Sbjct: 143 FGLSEPGNGSDAGAASTTATKV-DGGYVINGTKMWITNAYEAEASVIFATTDKSMKHKGI 201 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF+VP + +G + ++K+G R ++T L + N F + + N+ P K Sbjct: 202 SCFVVPN-----NSDGFSLGKKEDKLGIRGSSTASLIYENCF---VPEENLIGEPGFGFK 253 Query: 314 ILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIAD 361 I A+ ++ G R+ +A A+ Y+ R + ++++ IAD Sbjct: 254 I------AMNTLDGGRIGIAAQAIGIAQAAMDCAVKYSLDRKSFNVPIAKHQMIQQKIAD 307 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + I +A L+++ A D +S ++ AA A++ A W V ++++ +GG Sbjct: 308 MEVKIESARMLNYKAAALKDNGQSYTKHAAMAKLAASEAATW-------VAHQSIQVLGG 360 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++ + RHYR++ I G+ Sbjct: 361 MGFVSDMPAERHYRDARITEIYEGT 385 >gi|296269777|ref|YP_003652409.1| butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833] gi|296092564|gb|ADG88516.1| Butyryl-CoA dehydrogenase [Thermobispora bispora DSM 43833] Length = 386 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 38/298 (12%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A T ++W P++ S E A+G LTE G+D A+++++ Sbjct: 98 AKTIAAHGTEEQKREWLPRLTSGE--------------ALGCFALTEPGTGSDAASVSTR 143 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRL 275 + G + ++G K F+++ +D + A+ E + FLVP G + Sbjct: 144 AVR-DGGDWVINGAKMFITNGTWADLALTFARTSEKGITAFLVPT-----DTPGFRTTEI 197 Query: 276 KNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 K+G R AT EL F S G + L ++ G + +I + A +V Sbjct: 198 HGKLGLRGQATAELTFDEVRVPDSARLGEVDRGLGIALGTLSRGRISV----AAGAVGLA 253 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + +L A+ YA R G + +++ +AD A +I AA AL+ ++A D + E Sbjct: 254 QGALDAAVRYATERTQFGRPIASFQLVQELLADSAAEIKAARALTHQVARMVDAGATPKE 313 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A A I KY+ +MA V ++ GG GYI+E ++ R++ ++ G+ Sbjct: 314 YATDA----SIAKYFASEMAVRVANNCLQVFGGYGYIDEYPAGKYLRDARVLTLYEGT 367 >gi|87121780|ref|ZP_01077667.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121] gi|86163031|gb|EAQ64309.1| acyl-CoA dehydrogenase family protein [Marinomonas sp. MED121] Length = 607 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 44/316 (13%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS--- 236 S E+ T PM A + LTE G+ +A IT+ + +DG Y + G K F++ Sbjct: 143 SEEHKATYLPPMMDGRFAGTMALTEPGQGSALADITTSAKPQTDGTYRIFGQKMFITGGD 202 Query: 237 SPMSDAFI--MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRS 283 ++D I +LA+VE + F+ P++L EDGS N + L +K+G ++ Sbjct: 203 QSLTDNIIHMVLARVEDAPAGTKGISMFICPKVLVNEDGSLGERNDVALAGLLHKMGYKN 262 Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLAEAI 336 + L F G+L+G+ N + + +I + ++++ G SL Sbjct: 263 ATSTVLNFGEKDGAVGYLVGEENKGLSYMFQLMNEARISVGSGASLLGYQGYNYSL---- 318 Query: 337 HYARRRHVSGGILIDQPVMKRAI----ADIALDIAA-------ATALSFRLANSFDEAKS 385 YAR R P K+ AD+ + A + AL ++ F+++++ Sbjct: 319 EYARNRPQGRPPTDRDPSSKQVNIVEHADVRRMLLAQKAYSEGSLALCLYASSLFEDSQT 378 Query: 386 RSEE----AAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E AA+ ++ PI K + K A++ +GGSGYI E + ++YR++ Sbjct: 379 GATEEDRKAAFTLLDLITPIVKSFPSKYGLKANELAIQILGGSGYIREYPVEQYYRDNRL 438 Query: 440 NSILLGSGNAMVLDVL 455 N+I G+ LD+L Sbjct: 439 NAIHEGTDGIHGLDLL 454 >gi|332307341|ref|YP_004435192.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174670|gb|AEE23924.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 606 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 135/301 (44%), Gaps = 39/301 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ DG Y + G K F+S+ D I+LA++ G Sbjct: 165 LTEPQCGTDLGQVKTKAIPNDDGTYDIVGTKIFISAGEHDLTENIIHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP++ D G N + +++K+G ++++T L F N G L+G N Sbjct: 225 RGISLFIVPKIQVDQQGNLGEGNQVTCGAIEDKMGIKASSTAVLNFDNAKGVLIGPKNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +A+ V ++ ++ YA+ R V+ I++ Sbjct: 285 LECMFTFMNTARVGTALQGVCASELAYQNSLLYAKDRLSMRALTGKKCPDKVADPIIVHP 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEA---AYARI--MAPITKYWCCK 406 V K + A+ A+ + A DE + +++EEA A R+ + PI K + + Sbjct: 345 DVRKMLMTQKAIS-EGGRAMIYYTAKIVDEIEMAKTEEARKVADDRLGFITPILKAFLTE 403 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463 M + M+ GG GYI+E + + R+ +++ G+ LD+L LL +G + Sbjct: 404 MGCESTSHGMQVFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLGRKILLTRGKS 463 Query: 464 L 464 L Sbjct: 464 L 464 >gi|149377504|ref|ZP_01895245.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149358196|gb|EDM46677.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 599 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + S+ + +DG Y ++G K F+S+ D I+LA++ G Sbjct: 165 LTEPHCGSDLGTLRSKAEPNADGTYSITGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 224 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L +DGS N + +++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKQLPNDDGSSGERNAVSCGSIEHKMGIHGNATCVMNFDGAKGWLIGPENRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG-----GI---LIDQP 353 + + +AI + + ++ YA+ R +SG GI +I P Sbjct: 285 LNCMFTFMNTARIGTAIQGLGAAELGFQGSLAYAKDRLAMRSLSGPKNPEGIADPIIVHP 344 Query: 354 VMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 ++R A+A+ A + TA + +S + R + PI K + ++ Sbjct: 345 DVRRMLLSQKAVAEGARALIYLTAQQADIVHSGKTEEDRKAADEALGFLTPIAKAFLTEI 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 M+ GG G+I E + ++ R++ I G+ LD+L L+ +G +L Sbjct: 405 GYEAANLGMQVFGGHGFISEWGMEQNVRDARIGMIYEGTTGIQALDLLGRKVLMTQGESL 464 >gi|54293844|ref|YP_126259.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens] gi|53753676|emb|CAH15134.1| hypothetical protein lpl0900 [Legionella pneumophila str. Lens] Length = 384 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 155/380 (40%), Gaps = 55/380 (14%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P + WD+ + P +LR + G+ + E + Q ++ AA ++ QL Sbjct: 26 PMADFWDEQGYFPI--EILREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78 Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 G + + + S AS+V + + K W PK+ S E V LT Sbjct: 79 GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262 E G+D A++ ++ K + Y L+G K F+S +SD ++ + + + L+ Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310 E +P GL + +L+ K+G R+ T L F N GF + LN G Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ G L + Y R G L ++ +D+ D AA Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFSDMLTDYEAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +R A + D +A A + + K +A + +AM+ GG GY+ + I Sbjct: 295 LMVYRAAAAMDN------DAPNAPMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348 Query: 431 ARHYRESPANSILLGSGNAM 450 R +R+ + IL G+ M Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368 >gi|167031414|ref|YP_001666645.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166857902|gb|ABY96309.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 601 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G NG+ +++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ + YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A+ + A D + + R + A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|256420334|ref|YP_003120987.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] gi|256035242|gb|ACU58786.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 35/284 (12%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P ++ IG GLTE G+D + ++ D + L+G K W Sbjct: 101 FGSEEQKQRYLPKLASAEWIGAWGLTEPNTGSDAMNMKCVARREGDE-WVLNGTKCWITH 159 Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 D +++A+ + R + ++E G+P G + +NK+G R++ T E+ F N Sbjct: 160 GKSGDVAVVIARTGDVRDSHGMSAFVVERGTP-GFSGGKKENKLGMRASETAEMIFDNCR 218 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 +LG N G ++ MK+L D +S++ + + +A+ A+ YA+ RH Sbjct: 219 IPVANMLG--NEGDGFIQSMKVL---DGGRISIAALSLGIAKGAYEAALKYAQERH---- 269 Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 D+P+ + +AD+A +I AA L+ + A+ ++ AA A KY Sbjct: 270 -QFDKPIASFQGISFKLADMATEIMAAELLTMQAADGKTRGAKVTQHAAMA-------KY 321 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++A EA++ GG GY ++ + + YR++ +I G+ Sbjct: 322 YASEVAVKAANEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGEGT 365 >gi|228942488|ref|ZP_04105024.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975420|ref|ZP_04135975.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982055|ref|ZP_04142347.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228777593|gb|EEM25868.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228784214|gb|EEM32238.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817171|gb|EEM63260.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943139|gb|AEA19035.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar chinensis CT-43] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPASGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|257388115|ref|YP_003177888.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] gi|257170422|gb|ACV48181.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] Length = 385 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/276 (21%), Positives = 130/276 (47%), Gaps = 39/276 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA- 247 P+ +G ++E G+D+++++++ +K D + ++G+K W + + D F++L Sbjct: 112 PVATGDAIMGAAISEPDVGSDVSSVSTRAEKDGDE-WVINGNKMWITNGSIGDYFVVLCK 170 Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + EGR F +++ + +G ++ K+G R++ T EL +L D+ V Sbjct: 171 TDPEAEGRYNGF--SQIVVEADRDGFEADKITGKLGIRASDTAEL--------ILDDVRV 220 Query: 305 STGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 P E++ +++ + D V+ V +A+ A+ YA R + Sbjct: 221 ---PEENLVGTRGAGFLQLMQFFDETRTGVAAQAVGIAKGAAERALDYAEDREQFSKPIS 277 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + ++ ++++ + AA L+++ A S D + ++A + K + ++A Sbjct: 278 EFQAIQHKLSEMHTQVEAARMLTYKSAWSVDNEDDQ------LTMLASMAKEFASRVAVE 331 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V EA++ GG+GY+ + + R YR++ I G+ Sbjct: 332 VADEAVQIHGGAGYVNDFDVERFYRDAKITQIYEGT 367 >gi|42784517|ref|NP_981764.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|42740449|gb|AAS44372.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|11968090|ref|NP_071957.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Rattus norvegicus] gi|202687|gb|AAA40669.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Rattus norvegicus] gi|48734846|gb|AAH72545.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Rattus norvegicus] gi|149063586|gb|EDM13909.1| acetyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Rattus norvegicus] Length = 414 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ ++ D + L+G K W +S + A ++ A + + Sbjct: 154 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 212 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 213 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 264 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA RH G L ++ +AD+AL + Sbjct: 265 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 324 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++E+A A++ A + A A+ +A++ +GG GY+ E Sbjct: 325 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 377 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 378 MPAERYYRDARITEIYEGT 396 >gi|289622491|emb|CBI51113.1| unnamed protein product [Sordaria macrospora] Length = 473 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 28/267 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ + +K+ G Y L+G K W + P +D ++ A+ E G Sbjct: 201 LAMSESGSGSDVVSMRTTAKKVEGG-YKLNGSKMWITNGPDADVIVVYAKTEPEAGSKGI 259 Query: 255 -CFLV-PRLLEDGSP-NGL-CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 F+V + LE G +G C ++L +K+G R + T EL F N F +LG +N G Sbjct: 260 TAFIVETKDLETGKKADGFECLRKL-DKMGMRGSNTGELVFENVFVPEENVLGKVN---G 315 Query: 308 PVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 V + + L+ ++S M+ +L A+ YA R G + +++ +AD+ Sbjct: 316 GVRVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHSRKQFGTPIAQFQLLQGKLADMYT 375 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ A ++ A + DE + I+ + + A V +A++ +GG GY Sbjct: 376 KLQASRAYTYTTAKTVDEQGIIKTQDCAGAIL------YAAERATEVALDAIQILGGMGY 429 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 +EE ++R R++ I G+G + V Sbjct: 430 MEEMPVSRIMRDAKLYEI--GAGTSEV 454 >gi|20150494|pdb|1JQI|A Chain A, Crystal Structure Of Rat Short Chain Acyl-Coa Dehydrogenase Complexed With Acetoacetyl-Coa gi|20150495|pdb|1JQI|B Chain B, Crystal Structure Of Rat Short Chain Acyl-Coa Dehydrogenase Complexed With Acetoacetyl-Coa Length = 388 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ ++ D + L+G K W +S + A ++ A + + Sbjct: 128 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 186 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 187 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 238 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA RH G L ++ +AD+AL + Sbjct: 239 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALE 298 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++E+A A++ A + A A+ +A++ +GG GY+ E Sbjct: 299 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 351 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 352 MPAERYYRDARITEIYEGT 370 >gi|71754657|ref|XP_828243.1| isovaleryl-coA dehydrogenase [Trypanosoma brucei TREU927] gi|70833629|gb|EAN79131.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei] Length = 411 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 43/283 (15%) Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG 224 +T + W PK+ + E+ IG +G++E GTD+ + + K S+G Sbjct: 136 STAAQRERWLPKVLTGEH--------------IGAMGMSEPGAGTDVLGMLTTATKESNG 181 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G K W + ++D ++ A+V+G++ F+V + +G + +K G R Sbjct: 182 KYILNGGKTWVTNGTVADLVLVYAKVDGKITAFVVEK-----GASGFSVGKKIDKCGMRG 236 Query: 284 NATVELEFSNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE----- 334 + +L F N +LG+ N+ G V M+ L+ ++++ M V +A+ Sbjct: 237 SHMCQLFFDNV---VLGEENLLGTEGKGLVAMMR---NLEVERLTLAAMAVGIADRCVEL 290 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 YA R G + + ++R IA+ + AA +L++ ++ S R Sbjct: 291 MTCYANERKTFGKHIWNYGQIQRYIAETFAETEAAKSLTYAVSRSVAPGNCN-------R 343 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + + K + +A AM+ +GG GY + + R +R++ Sbjct: 344 LGSDAVKLFAAPVAKRAADNAMQVMGGMGYARDMPVERLWRDA 386 >gi|309791992|ref|ZP_07686470.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] gi|308225986|gb|EFO79736.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] Length = 382 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 24/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + D + ++G K W ++P++ I+ A + G + Sbjct: 124 FGLTEPHAGSDAGATRTTAVLEGD-EWVINGSKMWITNAPVAGHVIVTAVTDKEKGKKGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G G+ + + + K+G R + T ++ N LLG+ ++ L Sbjct: 183 SAIIIPGGTPGMTFGKPEEKMGLRGSVTTAIQLENVRVPKENLLGERGKGF-----IQFL 237 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + + M V LA+ A+ YAR R G + + IAD+ + ++AA Sbjct: 238 QVLDGGRVGIGAMSVGLAQGAYEAAVQYARERESFGQPIGKHQSVANMIADMEVAVSAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A K + EAA A++ A C+ +A++ +GG GY +E + Sbjct: 298 LLVYQAAWLKQLGKPYTREAAVAKLYASEASEKVCR-------DAIQIMGGYGYSQEFPV 350 Query: 431 ARHYRESPANSILLGSGNAMVL 452 R YR++ + +G G + +L Sbjct: 351 ERMYRDT--RLLTIGEGTSEIL 370 >gi|146309443|ref|YP_001189908.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145577644|gb|ABP87176.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 392 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 116/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 114 FGNEATKQRYLPKLASGEYIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRLTGSKMWITN 172 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 173 SPIADVFVVWAKDDAGEIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 227 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 D+ GP L+SA +S + AE A Y RH G Sbjct: 228 CPEENAFPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRHQFGR 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 282 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E IARH Sbjct: 335 ALDIARMARDMLGGNGISDEFGIARH 360 >gi|52140219|ref|YP_086610.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] gi|51973688|gb|AAU15238.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAVQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|26987110|ref|NP_742535.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|148545649|ref|YP_001265751.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|24981738|gb|AAN65999.1|AE016228_12 acyl-CoA dehydrogenase, putative [Pseudomonas putida KT2440] gi|148509707|gb|ABQ76567.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] gi|313496734|gb|ADR58100.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 601 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G NG+ +++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPKFLPNAEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V+ + YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A+ + A D + + R + A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFEAANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|91788874|ref|YP_549826.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91698099|gb|ABE44928.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 389 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 30/266 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + ++E G+D+ + + K SDG Y L+G K F+++ +D I++A+ G G Sbjct: 124 IAMSEPAAGSDLQGVKTTAIKQSDGSYLLNGSKTFVTNGWHADLVIVVAKTNPAAGAKGT 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-DLNVSTGPVED 311 L+ L+E G P +RLK K+G ++ T EL F + G LLG + + + G + Sbjct: 184 SLL--LVERGMPGFEVGKRLK-KLGLKAQDTSELFFHDVKVPAGHLLGGEAHENRGFICL 240 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M+ L + L AI +VS + ++ + Y + R V G + + +A++ ++ A Sbjct: 241 MEQLPWERLQIAITAVSAAQAAIDWTLAYVKERKVFGQPVASYQNTRYKLAELQTEVQVA 300 Query: 370 TAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A+ D A A + KYWC + V+ E ++ GG GY Sbjct: 301 RVFVDKCTELVAADMLDTAT------------ASMAKYWCSDLQCKVMDECVQLFGGYGY 348 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E I R Y ++ I G+ M Sbjct: 349 MWEYPITRAYADARVQRIYGGTNEIM 374 >gi|228924077|ref|ZP_04087353.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229193594|ref|ZP_04320538.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228589899|gb|EEK47774.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228835567|gb|EEM80932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|170722513|ref|YP_001750201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169760516|gb|ACA73832.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 60/306 (19%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK+ S E + G+ +TE GTD+ AI ++ ++ D Y Sbjct: 106 TEEQKQRWLPKLSSGE-------------MLAGIAMTEPGCGTDLKAIATRARRDGDH-Y 151 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 + G K F+++ + + +++ G VG L ++E G RL KIG ++ Sbjct: 152 VIDGAKTFITNGFTCSLLIVVARTGEVGSKGLSLIVVETEDLPGFRVGRLLEKIGMPASD 211 Query: 286 TVELEFSNT---------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 T EL F + F L+G L P E M I A+ + + + Sbjct: 212 TAELFFGDVRVPVDQLLGGVEGHGFKQLMGQL-----PYERMSI------AVPAAAVIDR 260 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSFDEAK 384 +L I Y + R + G L D + +A++A A +F RL + Sbjct: 261 ALELTIEYTKERKIFGAPLFDMQATRHKLAELA--TIAHVVRTFVNDCIQRLLDG----- 313 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + +EAAY + K+WC + V E ++ GG G++ E IAR Y S I Sbjct: 314 TLDDEAAY------MAKWWCTEQQCRVTDECLQLFGGYGFMAEYPIARMYAASRVQKIYG 367 Query: 445 GSGNAM 450 G+ M Sbjct: 368 GANEVM 373 >gi|111018540|ref|YP_701512.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110818070|gb|ABG93354.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 382 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 108/409 (26%), Positives = 179/409 (43%), Gaps = 70/409 (17%) Query: 63 EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122 E +S TA++ A A + P HA WD+ + P +LR++ G+ I+ R Sbjct: 8 ERAISDTARDFA--AEHLAP--HAV-----EWDQAKHFPV--DVLRKAASLGMG-GIYIR 55 Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA----SMVALMT----TPRVHKDW 174 E V + ++ AAR++ QL G PS+ + +MV M T + W Sbjct: 56 --EDVGGSELTRVDAARIF--EQLAKG---CPSIAAYISIHNMVTWMIDRFGTDEQRRAW 108 Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234 P + S + Q S LTE G+D AA++++ + D Y L+G K F Sbjct: 109 VPGLCSMD---------QLGSYC----LTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQF 154 Query: 235 LS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 +S + S+ ++++A+ G + F+VP+ GSP GL + + K+G + T ++ Sbjct: 155 ISGAGTSEVYVVMARTGEGGPGGISAFIVPK----GSP-GLSFGPNEVKMGWNAQPTRQV 209 Query: 290 EF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 F N G G ++ + ++ I A SV G + +L A+ Y R Sbjct: 210 IFEDVRVPAGNLLGSEGGGFRIAMAGLNGGRLNI----AACSVGGAQTALERAVAYLADR 265 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITK 401 G L+D ++ +AD+ ++ AA L +R A + D A E A A+ A T Sbjct: 266 KAFGAPLLDSQALQFQLADMRTELEAARTLLWRAAAALEDGAPDVVELCAMAKRFATDTG 325 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + V A++ GG GY+ E I + R+ + IL GS M Sbjct: 326 F-------EVANRALQLHGGYGYLAEYGIEKIVRDLRVHQILEGSNEIM 367 >gi|89901050|ref|YP_523521.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89345787|gb|ABD69990.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 593 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 89/374 (23%), Positives = 173/374 (46%), Gaps = 63/374 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+ + + + + K+ S ++ T + LTE + G+ Sbjct: 124 LCPMLTDGAIEALLVAGSDELKRKFVGKLISGQWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+AA+ S Q +DG Y + G K F++ D ++LA+V G + FLV Sbjct: 171 DLAAVRSTAQPQADGSYKVFGTKIFITYGEHDMAENIIHLVLARVPGAPEGVKGISLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+L+ +DG+ N + +++K+G +++ T L+F + G+++G N +E Sbjct: 231 PKLMVGDDGALGARNDVACVSIEHKLGIKASPTAVLQFGDQGGAVGYVVGQENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI--------LIDQPVMKRAI 359 M I++ + + G+ V+ +A+ +A R S + +I+ P +KR + Sbjct: 288 YMFIMMNAARFAVGMQGIAVADRAYQKAVRFAHDRAQSRDLAGSDGPVSIINHPDVKRML 347 Query: 360 ADIALDIAAA-------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + A S ++ DE ++ +A Y + P+ K + +M+ + Sbjct: 348 LTMRAHVEGTRALAYVAAAASDAAHHAADELTRKNNQAVY-EYLVPVVKGFATEMSVEMT 406 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEKGT---NLFE 466 + ++ GG GYIEE A+H+R++ +I G+ D++ L +KG L Sbjct: 407 SLGVQVHGGMGYIEETGAAQHFRDARILTIYEGTTAIQANDIVGRKTLRDKGAVAKALCA 466 Query: 467 QLFSTLEQDLGSSG 480 Q+ T EQDL + G Sbjct: 467 QIALT-EQDLSARG 479 >gi|330467508|ref|YP_004405251.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] gi|328810479|gb|AEB44651.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] Length = 382 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 41/294 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P + A+G LTE G+D AA+T++ + D + L+G K F+++ +D ++ A Sbjct: 112 PALCSGTALGCFALTEPDSGSDAAALTTRAVRDGDD-WLLTGRKTFITNGTTADVALLFA 170 Query: 248 QVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296 + G + FLVP SP GL +K K+G R AT EL G Sbjct: 171 RTGGPGHRGITAFLVP----TDSP-GLSRSEIKGKLGLRGQATAELVLDGVRVPDTARLG 225 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351 ++ G + + MSV+ V +A+ A+ YA R G + Sbjct: 226 ECGAGFRLALGTLAKGR---------MSVAAGCVGIAQGCLNAAVDYAGARTQFGKPIAG 276 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +A IA+D AAA L +++A+ D + + EA+ A++ A + A Sbjct: 277 HQLVQQLLARIAVDTAAARLLVWQVADLIDRGQPYATEASMAKLFA-------SEAAVRA 329 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 +A++ GG GYI+E + ++ R++ ++ G+ L + L G N F Sbjct: 330 ANDAIQVFGGYGYIDEYPVGKYLRDARVTTLYEGTSQIQQLLIGRAL-TGVNAF 382 >gi|227500411|ref|ZP_03930473.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] gi|227217474|gb|EEI82793.1| acyl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] Length = 561 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 G GLTE+ G+D A + D Y L+G K F++ +P + +++ A G Sbjct: 122 GFGLTEENAGSDSAGTQTTAVLKGDH-YILNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + D G + +K+G RS+ T EL F+N LLG E+ K Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFNNVKVPKENLLG---------EEGKG 231 Query: 315 LIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADI 362 Y A+M + G R+ +A A Y R G + +AD+ Sbjct: 232 FKY---AMMILDGGRIGIASQALGIAQGAYESAKDYGLNREQFGQAIARMQHNAFILADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ AA L + A D+ + ++AA A++ A MA + ++A++ GGS Sbjct: 289 ATELKAARLLIYDAARKKDKHEPYGKDAAMAKLFA-------SDMAEKLTSKALQLYGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL 452 G+I+ + R+YR+S I G+ M L Sbjct: 342 GFIKGVDVERYYRDSKITQIYEGTNEIMRL 371 >gi|118616613|ref|YP_904945.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99] gi|118568723|gb|ABL03474.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium ulcerans Agy99] Length = 390 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 56/313 (17%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG-- 218 M+ T KDW P++ A M + LTE G+D +A++++ Sbjct: 95 MIDSFGTDEQRKDWIPRL----------ATMDAIASYC---LTEPGAGSDASALSARAVR 141 Query: 219 QKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQR 274 Q + G Y L G K F+S + SD ++++A+ EG G + ++E G+P GL + Sbjct: 142 QGSAPGSDYVLDGVKQFISGAGASDVYVVMARTGAEGPRG--ISAFIVEKGTP-GLSFGA 198 Query: 275 LKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIY 317 L+ K+G + T ++ FG + LN Sbjct: 199 LEEKMGWHAQPTAQVVLEGVRVPADAMLGGVDGTGAGFGIAMNGLNGGR----------- 247 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L+ A S+ G + + A+ Y R R G L+D+P ++ +AD+A + A+ L +R A Sbjct: 248 LNIAACSLGGAQSAFAKTGAYVRERQAFGASLLDEPTVRFTLADMATGLEASRMLLWRAA 307 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 N+ DE + E + + K + V +A++ GG GY+ E + + R+ Sbjct: 308 NALDEDDADKVE------LCAMAKRFVTDTCFDVADKALQLHGGYGYLREYGLEKIVRDL 361 Query: 438 PANSILLGSGNAM 450 + IL G+ M Sbjct: 362 RVHRILEGTNEIM 374 >gi|89069610|ref|ZP_01156949.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus HTCC2516] gi|89044808|gb|EAR50908.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus HTCC2516] Length = 592 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 62/381 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P + S ++ T + LTE + GTD+ I ++ + DG Y ++G K Sbjct: 148 WLPNMISGQWSGT-------------MNLTEPQCGTDLGLIRTRAEPAGDGSYRITGQKI 194 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGSP---NGLCYQRLKN 277 ++S+ D ++LA++ G + F+VP+ L +DG P N + +++ Sbjct: 195 WISAGEHDLTENIVHLVLARIPGAPEGTRGLSLFIVPKFLLDDDGRPGPRNAVSCGGVEH 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + G+LLG+ N + M + + V+ V+ A Sbjct: 255 KMGFHGNATCVINHDGATGYLLGEENAGMRAMFTMMNEARIGVGLQGVAQAAVAYENAAA 314 Query: 338 YARR----RHVSGGI--------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-K 384 +AR R ++G +I P ++R + D + A A+ D A + Sbjct: 315 FARDRLQGRALAGAAAPERPADPIIVHPDVRRNLMDQKAFVEGGRAFLLWGASLIDRAHR 374 Query: 385 SRSEEA-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 R +A ++ P+ K + A + GG+G++ E + + R++ I Sbjct: 375 GRDADAEGLVSLLTPVIKGFLTDKGFETTVLAQQTFGGAGFVRETGVEQFVRDARITMIY 434 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLAR 502 G+ LD++ + LG+ G K I + I + C+E G Sbjct: 435 EGTNGVQALDLVG-----------------RKLGAGGGKYIMAYFELIKTWCREAAGDPD 477 Query: 503 FLTEKI-ALASSAAALYRAGM 522 F + L +++ L +AGM Sbjct: 478 FDAAFVEPLKTASKQLQQAGM 498 >gi|296478490|gb|DAA20605.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] Length = 412 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 33/250 (13%) Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + LSG K W ++ + A ++ A + + FLVP GL + ++K+ Sbjct: 177 WVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPM-----PTPGLTLGKKEDKL 231 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA 335 G R+++T L F + LLG+ P KI + LD+ + ++ + +A+A Sbjct: 232 GIRASSTANLIFEDCRIPKDSLLGE------PGLGFKIAMQTLDTGRIGIASQALGIAQA 285 Query: 336 -----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 + YA R G L ++ +AD+AL + +A L++R A D K ++EA Sbjct: 286 ALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEA 345 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A A++ A + A A+ +AM+ +GG GY++E RHYR++ I G+ Sbjct: 346 AMAKLAA-------SEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQ 398 Query: 451 VLDVLNLLEK 460 L V L K Sbjct: 399 RLVVAGHLLK 408 >gi|239787389|emb|CAX83865.1| Probable acyl-CoA dehydrogenase protein [uncultured bacterium] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%) Query: 190 PMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD----AFI 244 P T IG+ LTE + G+D A + ++ K + Y L+G K F++S + AF Sbjct: 110 PEMATGKKIGIFALTEPQAGSDAANLKTKAVKDGNSGYILNGTKQFITSGRNGQVMIAFA 169 Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 + G+ G F+VP G R++ K+G ++ T ++ F + L Sbjct: 170 VTDPAAGKKGITAFIVPT-----DTPGYKVWRVEEKMGQHASDTCQVLFEDMRLPVDLRL 224 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G ++ +E +I I A SV + +L AI YA+ R G + + Sbjct: 225 GQEGEGYKIALSNLEGGRIGI----ASQSVGMAKAALETAISYAKERTAFGKPIAQHQAV 280 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A+ I AA L A DE +EA+ A++ A +MA V+++A Sbjct: 281 GFRLADMAMRIEAARHLVLEAARLRDEGLPCLKEASMAKLFA-------SEMAERVVSDA 333 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG GY+ + + R YR+ I G+ + Sbjct: 334 IQTLGGYGYLADFPLERIYRDVRVTQIYEGTSD 366 >gi|111019745|ref|YP_702717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819275|gb|ABG94559.1| probable long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 19/300 (6%) Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 V+S S+ + TP + D A + RE+ P M + V +G+TE GG+D+A++ Sbjct: 86 VSSFSIHFDIVTPYI-VDLATEETKREWLPQ----MAEGEVVAAIGMTEPAGGSDLASLK 140 Query: 216 SQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + DG + L+G K F+++ S D ++ A+ + + + L D S G Sbjct: 141 TSA--VRDGSDWILNGSKTFITNGYSADLVVVAARTDPQQRSRGISLFLVDSSLPGFERG 198 Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 R +K+G + T EL F +LG+ + + L +A+ +V+ + Sbjct: 199 RKLDKVGQPESDTAELFFDGLRLPAAAMLGEPETGFAAMMERLPQERLGTAVANVAHAKQ 258 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 L+E I Y R R G + K +A++ I A A D A + E+ Sbjct: 259 ILSETIDYVRNRKAFGRSIGSFQHNKFLLAELVTKIEVAQAF-------VDAAVTEHAES 311 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + A K+W + V+ ++ GG GY+ E +AR + ++ I GS M Sbjct: 312 GLSPVDAAKAKWWSAHVQNEVLDHCVQLYGGYGYMREYRVARAWMDARVTKIWAGSNEIM 371 >gi|16127623|ref|NP_422187.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15] gi|221236440|ref|YP_002518877.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|13425103|gb|AAK25355.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15] gi|220965613|gb|ACL96969.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] Length = 603 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 42/293 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ------ 248 + LTE + G+D+AA+T+ DG + ++G K +++ DA ++LA+ Sbjct: 177 MNLTEPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPP 236 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FL P++L +DG N L L++K+G + T + F L+G L Sbjct: 237 GVKG-ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGL 295 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY---------ARRRHVSGGI----L 349 + + +++A + V V++AE + A+ R G L Sbjct: 296 GQGL-----PNMFVMMNAARLQVGTQGVAIAERAYQQALAFSQDRAQGRSAWTGAYPSRL 350 Query: 350 IDQPVMKRAIADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 D P ++R + + I AA TA++ LA + +A +R+ ++ PI K W Sbjct: 351 FDHPDVRRTLVLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLREELLTPIAKAW 410 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + V ++ ++ GG G+IEE A+HYR++ I G+ +D++ Sbjct: 411 STDIGVWVASQGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVG 463 >gi|326795540|ref|YP_004313360.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1] gi|326546304|gb|ADZ91524.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1] Length = 582 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 56/341 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----E 250 + LTE G+D+AAI ++ D + + G K F++ MS+ + +LA++ E Sbjct: 161 MNLTEPNAGSDLAAIRTKATPHEDH-FLIQGQKIFITWGDHQMSENIVHLVLARLPDAPE 219 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G G F+VP+ L D G N + L++K+G ++ T + F T G+L+G Sbjct: 220 GVKGISLFVVPKFLVDENGALGRRNDVSVASLEHKMGIHASPTCVMAFGETSGAVGYLVG 279 Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG------- 347 + P + +K + +++A V +++AE A+ YA+ R V G Sbjct: 280 E------PNQGLKAMFAMMNNARQGVGLQGLAIAERAYQQALEYAQER-VQGYDSSRKNR 332 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSF---------RLANSFDEAKSRSEEAAYARIMA 397 ++ P +KR + + I A+ L + +LA D+AK+ +E A + Sbjct: 333 VAIVAHPDVKRMLMTMKSLIDASRLLIYVAAVENDVSKLAVG-DQAKTAAELTA---LYT 388 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-- 455 P+ K W ++A V + A++ GG G+IEE +A+H R++ I G+ +D++ Sbjct: 389 PVVKGWITEIAQEVTSLAVQVHGGMGFIEETGVAQHARDARILPIYEGTNGIQAIDLIGR 448 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 LL + L + + D+ +S K + ++L K+ Sbjct: 449 KLLGDNASAMATLINQIVADVHASQSKYSEAVLSEVALFKQ 489 >gi|194014442|ref|ZP_03053059.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa dehydrogenase) [Bacillus pumilus ATCC 7061] gi|194013468|gb|EDW23033.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa dehydrogenase) [Bacillus pumilus ATCC 7061] Length = 380 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 46/329 (13%) Query: 141 YLMAQLEAG-HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 Y +A E G S ++ A+ V+L +P + + E + P+ + Sbjct: 69 YALAVEEIGKQCASTGLSYAAAVSLGASPLYY------FGTEEQKMDHLVPLASGTALGS 122 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE----GR- 252 GLTE G+D A ++ + + DG Y +SG K W ++ + I+ A + GR Sbjct: 123 FGLTEPNAGSD--AKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTAVSDHDEHGRP 180 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + F+V + GL +K+G R + T E+ N +LGD P Sbjct: 181 IISAFIVEK-----GQKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHILGD------P 229 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 + K +Y LD +S++ + V +A+A + YA+ R G L ++ +AD+ Sbjct: 230 NKGFKQFLYTLDGGRISIAALSVGIAQAALDASLSYAKERKQFGQTLSSFQAIQFKLADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A+ I A + ++ A D K ++EAAYA++ A +MA +A++ GG+ Sbjct: 290 AMQIELARQMVWKAAWLKDHGKPFTKEAAYAKLFA-------SEMATKASLDAVQIHGGT 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 GY++E + R R+ A + +G G + + Sbjct: 343 GYMKECGVERLVRD--AKLMEIGEGTSEI 369 >gi|30262538|ref|NP_844915.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47527836|ref|YP_019185.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|229602030|ref|YP_002866861.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] gi|30257170|gb|AAP26401.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47502984|gb|AAT31660.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|229266438|gb|ACQ48075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] Length = 381 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGIEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAVLAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|302189846|ref|ZP_07266519.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642] Length = 600 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMLEGRFFGTMALTEPHAGSSLSDIRTRAEPAGDGTYRLRGNKIFISCGDHSLSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G LN + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLNYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARER--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPDSKPVSIIEHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDDR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|226355911|ref|YP_002785651.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226317901|gb|ACO45897.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 378 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 22/267 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246 P+ + + L+E G+D AA+ + + DG + L+G K W + +++ ++ Sbjct: 111 GPLTEKAGLAAFALSEPNNGSDAAAMHTTA--VLDGDEWVLNGTKMWISNGGLAEITVVF 168 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299 A + + G L+ G Y ++K+K+G R++ T EL F N G L Sbjct: 169 ATTDRQGGHKATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLG 228 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 ++ ++ +I + A SV R ++ E++ YA+ R G + ++ + Sbjct: 229 DGFKIAMKTLDKTRIPV----AAGSVGIARRAMDESVKYAKEREAFGKPIAQFQAIQFKL 284 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++A+ I + + A D+ + E+A I K +C +MA EA++ Sbjct: 285 AEMAMGIETGRLMYQKAAWLVDQGQPHGYESA-------IAKAYCSEMAFDAANEAIQVH 337 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY+ E + + R+ N I G+ Sbjct: 338 GGYGYVGEYPVEKLLRDVKLNQIYEGT 364 >gi|300117855|ref|ZP_07055622.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1] gi|298724719|gb|EFI65394.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1] Length = 379 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 34/299 (11%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + ++D +++ A + + + G + ++K+G RS+ T E+ F Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFE--- 215 Query: 296 GFLLGDLNVSTGPVEDM--------KILIY-LDSAIMSVSGMRVSLAE-----AIHYARR 341 D + PVE++ KI + LD ++ V +A+ ++ YAR Sbjct: 216 -----DCRI---PVENLLGEEGRGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARE 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 RH G + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 268 RHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA---- 323 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 324 ---GDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|89890183|ref|ZP_01201694.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7] gi|89518456|gb|EAS21112.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BBFL7] Length = 389 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 14/262 (5%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251 T IG LG+TE GG+D+A + + K D Y ++G K F+++ + SD ++ A+ + Sbjct: 118 TGEKIGCLGITEPFGGSDVAGMRTTAVKDGDH-YVINGSKTFITNGVYSDYLVIAAKTDP 176 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + + D G+ +L NK+G R++ T E+ F N L+G+ Sbjct: 177 DAKGRGISIFVMDRDTPGISATKL-NKLGWRASDTGEIGFDNVRIPAENLMGEEGKGFPY 235 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L L I + + +L Y R R G + ++ +AD+ ++ Sbjct: 236 IMQHFALERLIMGINAHARAEYALGYTAQYMRERTAFGTTIDKFQALRHGMADMYSEVEM 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A ++ ++ D+ +EA+ +++++ K+A VI + ++ +GG GYIEE Sbjct: 296 AKNFNYSISEQLDQGLYPVKEASMSKLVS-------TKIADEVIYKCLQYLGGYGYIEEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 +AR +R+S I G+ M Sbjct: 349 PLARMWRDSRLGPIGGGTSEIM 370 >gi|290975558|ref|XP_002670509.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi] gi|284084069|gb|EFC37765.1| acyl-Coenzyme A dehydrogenase [Naegleria gruberi] Length = 394 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/272 (23%), Positives = 130/272 (47%), Gaps = 20/272 (7%) Query: 199 GLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 GLG L+E G+D ++ ++ + SDG Y L+G K W SS + +I++A + G Sbjct: 130 GLGSFCLSEASSGSDAFSLKTKAELQSDGSYVLNGTKCWITSSQEASFYIVMANTDFSKG 189 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + L D + G+ + ++K+G R+++T E+ + +G ++ G + KI Sbjct: 190 YKGITAFLVDKTNPGVKIGKKEDKLGIRASSTCEVILEDC---KVGPESILGGVGKGYKI 246 Query: 315 LI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I L+ + ++ + LA+ + Y + R G + D +M+ + +A +I A Sbjct: 247 AIEMLNEGRIGIAAQMIGLAQGVFDYTMPYLKSRKQFGTPIADFQMMEYHYSKLATEIEA 306 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + A + + ++EAA A K++ ++A V + +E +GG G+ + Sbjct: 307 GRLMVYNAARMKEAGQVFTKEAAMA-------KFYTSEVAGNVATKCIEMLGGVGFCRDF 359 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 S ++YR+ I G+ N ++ + ++K Sbjct: 360 SAEKYYRDCIIGKIYEGTSNINLVTIAKHVKK 391 >gi|255319846|ref|ZP_05361051.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens SK82] gi|262380377|ref|ZP_06073531.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255303165|gb|EET82377.1| acyl-CoA dehydrogenase domain protein [Acinetobacter radioresistens SK82] gi|262297823|gb|EEY85738.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 607 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 37/292 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ + +D Y ++G K F+S+ D I+LA++ Sbjct: 165 LTEPQCGTDLGQLKTKAEPQADSTYKITGTKIFISAGEHDLTENIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L G N + +++K+G +++AT L F N G+L+G+ N Sbjct: 225 KGISLFIVPKFLPTAEGSVGERNAVNCGSIEHKMGIKASATAVLNFDNATGYLIGEQNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +A+ ++ +S A+ YA+ R V+ I+ Sbjct: 285 LHAMFTFMNTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPEKVADAIIHHA 344 Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 V + + A+ + + +LA+ +A +R + A Y PI K + Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAQLADKMTDALARGDNAEYEEYDDKLGFYTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ M+ GG GYI+E + + R++ ++ G+ LD++ Sbjct: 405 TELGLEAANHGMQVFGGHGYIKEWGMEQIVRDARIATLYEGTTGVQALDLIG 456 >gi|254427010|ref|ZP_05040717.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196193179|gb|EDX88138.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 604 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 85/354 (24%), Positives = 154/354 (43%), Gaps = 55/354 (15%) Query: 142 LMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 +MA M P ++ +M + + T + H+D+ P+ + + Sbjct: 116 MMATANWSFSMYPGLSLGAMNTIQMHGTEQQHQDYL-------------VPLTEGTWGGT 162 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE + GTD+ + ++ + DG Y +SG K F+SS D I+LA++ + Sbjct: 163 MCLTEPQCGTDLGQVKTKAEPQKDGSYKISGTKIFISSGDHDLTENIVHIVLARLPDAPK 222 Query: 251 GRVGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 G G F+VP+ L G NG+ L+ K+G +++AT + F GFL+G + Sbjct: 223 GTKGISLFIVPKYLPGKIGEDNGVSCGSLEKKMGIKASATCVINFDEATGFLIGPEH--- 279 Query: 307 GPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRH----VSG------------- 346 G +E M + + +A+ V+ +S A+ YA+ R +SG Sbjct: 280 GGLECMFTFMNSARIGTAMQGVAHAELSYQGALPYAKERKSMRALSGKKEPDAIADSLIH 339 Query: 347 -GILIDQPVMKRAIAD--IALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKY 402 G + + ++AIA+ A+ AA +A D+ K + + PI K Sbjct: 340 HGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMKKYEHWDSELGFLTPILKG 399 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + E M+ GG GYI+E + + R++ +++ G+ LD+L Sbjct: 400 FLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGTTGIQALDLLG 453 >gi|90022774|ref|YP_528601.1| acyl-CoA dehydrogenase family protein [Saccharophagus degradans 2-40] gi|89952374|gb|ABD82389.1| acyl-CoA dehydrogenase-like protein [Saccharophagus degradans 2-40] Length = 589 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 47/315 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK++S E+ A + LTE GTD+ I ++ Q +DG Y ++G K F+ Sbjct: 152 PKMYSGEW-------------AGAMDLTEPHAGTDLGLIRTKAQPQADGSYAITGTKIFI 198 Query: 236 S---SPMSDAFIML-------AQVEGR-VGCFLVPRLLED-----GSPNGLCYQRLKNKI 279 + M+D + L A R + FLVP+++ + G+ NG+ ++ K+ Sbjct: 199 TWGEHDMADNIVHLVLAKLPDAPAGSRGISLFLVPKVIPNADGSLGARNGVSCGSIEKKM 258 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 G +++AT + F G+L+G+ N + M L + +S S A YA Sbjct: 259 GIKASATCVMNFDGAQGWLVGEPNKGLMAMFTMMNYERLMVGVQGISVAEASYQNAAEYA 318 Query: 340 RR----RHVSGGILIDQ--------PVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + R SG + D+ P ++R + + A +A D AK + Sbjct: 319 KERIQSRSPSGPQMPDKEADSLLVHPDVRRMLMTMRAYNEGGRAFYIYVARWLDTAKYGA 378 Query: 388 EEA------AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 E ++ P+ K + +A + GG GYI E +H R+ Sbjct: 379 TEELRKHADNMVALLTPVAKAFMTDVAFDSAVMGQQVYGGHGYIREWGQEQHVRDIRITQ 438 Query: 442 ILLGSGNAMVLDVLN 456 I G+ +D++ Sbjct: 439 IYEGTNGIQAMDLIG 453 >gi|291412758|ref|XP_002722640.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain [Oryctolagus cuniculus] Length = 432 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 18/265 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D ++ + +K + Y L G K W ++ +D F+++A V+ +G + Sbjct: 176 LSEAGAGSDSFSLKTTAEKKGN-YYILKGAKMWISNAGQADLFLVMANVDPALGYKGITS 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 L D G + +NK+G R+++T L F N + + N+ K I L+ Sbjct: 235 FLVDRDTEGFHIGKPENKLGLRASSTCPLTFENV---KVPESNILGQVGHGYKYAIGILN 291 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + LA+ I Y + R G L D ++ +A +A + AA L++ Sbjct: 292 EGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 351 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + + +EA+ A KY+ ++A ++ +E +GG GY ++ + +++ Sbjct: 352 NAARLLEAGRPFIKEASMA-------KYYASEIAGLTTSKCIEWMGGVGYTKDYPVEKYF 404 Query: 435 RESPANSILLGSGNAMVLDVLNLLE 459 R+S I G+ N + + +++ Sbjct: 405 RDSKIGVIYEGASNIQLNTIAKVID 429 >gi|222055283|ref|YP_002537645.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] gi|221564572|gb|ACM20544.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] Length = 380 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGCFL 257 ++E G+D+ I + + DG Y +SG K F + P++ + +LA+ GR G L Sbjct: 124 VSEPGAGSDVGNIRTTA--VRDGNHYVISGTKCFSTNGPIASFYTVLARTSENGRNG--L 179 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKI 314 L+E +P G +++ K+G R + T E+ E G LLG+ N G MK Sbjct: 180 TFFLVERDTP-GFSVGKIEKKLGQRGSKTSEMYLDEVRVPVGNLLGEEN--KGFNLAMK- 235 Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 D + ++ + +AE + +AR R G L + ++++ IAD A I AA Sbjct: 236 --DFDMSRPAIGAQALGIAEGAFDQMLRHARERKTFGQALCEHQMIQQIIADSATAIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R A +D+ + ++ +A + K + A + +A++ GG GY+++ Sbjct: 294 RGLVYRSAALYDQGQRNTK-------LASMAKLFASDAAMKITTDAIQVFGGYGYMQDYP 346 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 347 VERMFRDAKLTQIFEGA 363 >gi|260826029|ref|XP_002607968.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae] gi|229293318|gb|EEN63978.1| hypothetical protein BRAFLDRAFT_74917 [Branchiostoma floridae] Length = 383 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 26/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T L+E G+D A+ ++ K D + L+G K W +S + F++ A Sbjct: 113 PRLATDTVGSFCLSESESGSDAFALKTRADKKGD-YWVLNGSKMWISNSEQAGLFLVFAN 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + G + L D GL + ++K+G R+++T + F + LLG L Sbjct: 172 ADSSQGYKGISTFLVDRDTPGLTIDKHEDKLGIRASSTCPVHFEDVKIPESHLLGTLG-- 229 Query: 306 TGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 K I L+ + ++ V LA+ A+ Y R G + + M+ I Sbjct: 230 ----HGYKYAIGLLNEGRIGIAAQMVGLAQGCFDHAVPYTMDRKQFGQSIFNFQSMQHQI 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMEC 418 ++IA +I AA L + A R EA + I A + K++ ++A A+++E Sbjct: 286 SEIATEIEAARLLVYNAA--------RLREAGHPFIKQAAMAKFYAAEVAAKTTAKSIEW 337 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +GG G+ ++ + + YR+ +I G+ N + + L++ Sbjct: 338 MGGVGFTKDYPVEKFYRDCKIGAIYEGTNNIQLSTIARYLKQ 379 >gi|93006278|ref|YP_580715.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92393956|gb|ABE75231.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 597 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/331 (21%), Positives = 141/331 (42%), Gaps = 51/331 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ G Sbjct: 164 LTEAHAGSDLGIIRTKAEPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGT 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP++ EDGS N + +++K+G +++AT + F G+L+G N Sbjct: 224 KGISLFIVPKVTVNEDGSLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + + +A+ ++ + ++ YA+ R V+ I++ Sbjct: 284 LQCMFTFMNVARIGTAVQGLTAAEYAFQGSLTYAKDRLAMRSLSGVKAPEKVADPIIVHP 343 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYA----RIMAPITKYWCCKM 407 V + + A AL + L++ D AK + +A ++ PI K + + Sbjct: 344 AVRNMLLTEKAF-AEGGRALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLTET 402 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 ++ GG G+I E + ++ R++ + G+ LD+L Sbjct: 403 GLEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLG----------- 451 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 + LGS GK + ++ + C+E+K Sbjct: 452 -----RKVLGSQGKLLANFVKIIQTFCEENK 477 >gi|330826857|ref|YP_004390160.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] gi|329312229|gb|AEB86644.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans K601] Length = 597 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 146/356 (41%), Gaps = 65/356 (18%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 P+ + + G + LTE G+ + I + + DG Y +SGHK F+S D Sbjct: 148 PLMASGICAGTMALTEPGQGSALGDIKTVAEPADDGSYRISGHKMFISGGDQDFSDNIVH 207 Query: 244 IMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEF- 291 ++LA+++G + FLVP+ + G N + L +K+G R+ + L F Sbjct: 208 MVLARIKGAPAGVKGISLFLVPKFIPRADASRGERNDVALAGLLHKMGWRNTTSTVLSFG 267 Query: 292 --SNTFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 G+LLG+ N + + +I + L +A ++ G SLA YAR R Sbjct: 268 EKGGATGWLLGEPNRGLAHMFQLMNEARIGVGLIAACLAYRGFTESLA----YARER-PQ 322 Query: 346 GGI------------LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRS 387 G + +I+ +KR A A+ AL + + F +S + R Sbjct: 323 GRLPSCKNPLSPQVRIIEHADVKRLLLTQKAYAEGALALCLQASAWFEDQHSHPDQTRRE 382 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 ++ P+ K W + A++ +GGSGY E + + YR+ N I G+ Sbjct: 383 LAGHLLDLLTPVVKSWPSRYGCRSNDMAIQVLGGSGYTREYPVEQLYRDQRLNPIHEGTE 442 Query: 448 NAMVLDV----------------LNLLEKGTNLFEQLFSTLEQDL--GSSGKKVIT 485 LD+ LNL+ + ++ E L Q L G+ G + +T Sbjct: 443 AIHGLDLLSRKVRQADGVGLRAFLNLMRQESDAAEAPLQVLAQALRQGADGLEAVT 498 >gi|302383676|ref|YP_003819499.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264] gi|302194304|gb|ADL01876.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 594 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/321 (21%), Positives = 138/321 (42%), Gaps = 43/321 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE + G+D+ A+TS DG Y L+G K +++ DA ++LA++ Sbjct: 163 LTEPQAGSDLGALTSTATPNGDGTYSLTGQKIYITWGDHDATDNIVHMVLARLPDAPAGP 222 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FL + L G N +++K+G ++ T +++ L+G N Sbjct: 223 KGISLFLANKFLVKADGTLGDRNAFRPVGIEHKLGIHASPTCVMQYEGATAELVGRPNEG 282 Query: 306 TGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHV----SGGILIDQPVMKR 357 + M ++ + ++ ++ + +LA A+ + R V +G + D P ++R Sbjct: 283 LAHMFTMMNAARVGVGMEGVGIADRAYQHALAYALDRRQGRSVWTGEAGAPIFDHPDVRR 342 Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + I AA A+ + D A+ R+ ++ PI K W + Sbjct: 343 TLSVMKAKIEAARAICLSTGVAADMARHAATPEMRAHWKGREDLLTPIAKAWSTDAGVEI 402 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 ++ ++ GG G++EE A+ YR++ I G+ +D++ Sbjct: 403 ASQGVQIHGGMGFVEETGAAQFYRDARIAPIYEGTNGIQAMDLVG-------------RK 449 Query: 472 LEQDLGSSGKKVITILRDSIS 492 L QD G+S K VI ++ +++ Sbjct: 450 LSQDGGASAKAVIAEMKATLT 470 >gi|160886528|ref|ZP_02067531.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483] gi|237723365|ref|ZP_04553846.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4] gi|260173358|ref|ZP_05759770.1| acyl-CoA dehydrogenase [Bacteroides sp. D2] gi|293373189|ref|ZP_06619551.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|299149419|ref|ZP_07042476.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23] gi|315921630|ref|ZP_07917870.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108413|gb|EDO10158.1| hypothetical protein BACOVA_04539 [Bacteroides ovatus ATCC 8483] gi|229447887|gb|EEO53678.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_2_4] gi|292631837|gb|EFF50453.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298512606|gb|EFI36498.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_23] gi|313695505|gb|EFS32340.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 568 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 155/343 (45%), Gaps = 36/343 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + DG + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDANLHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468 + ++ GGSG++ E + R YR++ SI G+ + + + G+ + FE + Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFEAI 466 Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 + E + L S KK+ S + KE D+ L F K+ Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEVQDQELLDFTARKL 509 >gi|126324367|ref|XP_001376623.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 412 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ Q D + L+G K W +S + A ++ A + Sbjct: 152 FALSEPGNGSDAGAASTTAQLDGDS-WVLNGTKAWITNSWEASAAVVFATSSKSLKHKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + NV G K Sbjct: 211 TAFLVPM-----PTPGLSLGKKEDKMGIRASSTANLIFEDC---RIPKDNVLGGTGTGFK 262 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA +R G L ++ +AD+AL + Sbjct: 263 IAMQTLDMGRIGIAAQALGIAQAALDCAVDYAEKRMAFGSPLTKLQSIQFKLADMALALE 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K S+EAA A++ A + A + +A++ +GG GY+ E Sbjct: 323 SARLLTWRAAMLKDNQKPFSKEAAMAKLAA-------SEAATQIAHQAIQILGGMGYVTE 375 Query: 428 RSIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 376 MPAERHYRDARITEIYEGT 394 >gi|324326369|gb|ADY21629.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 572 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 38/320 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST 471 L V +L K EQ+ T Sbjct: 403 LTVAKMLMKQMEQMEQIEDT 422 >gi|257457881|ref|ZP_05623040.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii ATCC 35580] gi|257444594|gb|EEV19678.1| acyl-coa dehydrogenase, short-chain specific [Treponema vincentii ATCC 35580] Length = 390 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 26/268 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D ++ + I DG Y L+G K F++ +P +D +++ A Sbjct: 116 PLAKGEKIGAFGLTEPNAGSDAGG--TETEYIDDGSNYILNGSKIFITNAPKADTYVIFA 173 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 G + + + G + +K+G R++AT EL F+ LLG Sbjct: 174 ANPDVPGTKGISAFIVEKGDAGFEFGEHYDKLGIRTSATSELIFNEVTIPHDRLLGKEG- 232 Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358 E KI + LD + ++ + +A EA+ YAR R G + Q + Sbjct: 233 -----EGFKIAMKTLDGGRIGIASQALGIAQGAYEEAVKYARTREQFGKPIGAQQNLAFK 287 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ I AA L ++ A E K E+ MA K + +A V+ +A++ Sbjct: 288 LADMLTKIEAARLLIYKAA----EKKENHEDYGLDSAMA---KMYASDIALEVVNDALQI 340 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GGSG+I+ + + YR++ +I G+ Sbjct: 341 HGGSGFIKGIPVEKMYRDAKITTIYEGT 368 >gi|322492910|emb|CBZ28190.1| putative isovaleryl-coA dehydrogenase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 410 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 41/307 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P W PK+ + E+ +G +G++E GTD+ + +K S+G Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + ++D F++ A+V+G++ F V R ++ G +K G R++ Sbjct: 181 YVLNGSKIWITNGTVADVFLIYAKVDGKITAFAVERGMK-----GFTQGPKIDKCGMRAS 235 Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336 +L F + LLG+ G V M+ L+ ++++ M V +AE Sbjct: 236 HMCQLFFEDVVVPAENLLGE--EGKGMVGMMR---NLELERVTLAAMAVGIAERSVELMT 290 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA R G + + ++R IA+ D AA AL + ++++ R+ Sbjct: 291 SYASERKAFGQSISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNKN-------RLG 343 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + K + +A V A++ +GG GY + + R +R++ I G+ A ++ Sbjct: 344 SDAAKLFATPIAKKVADSAIQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAHHKNITK 403 Query: 457 LLEKGTN 463 L KG N Sbjct: 404 DLLKGHN 410 >gi|226365367|ref|YP_002783150.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226243857|dbj|BAH54205.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 464 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 54/318 (16%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + TP WAP+ F +P N ++ ++ I +E GG+D+ + + Sbjct: 96 SSIGQAATPEQMLRWAPECFG---EPGN---LKLAALCI----SEPEGGSDVRNLRTTAT 145 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + ++D ++ A V+ +G F+VP GSP G+ Sbjct: 146 RDGDD-WVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVP----GGSP-GIELV 199 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN---------------VSTG-PVEDMKI 314 R +K+G R++ T EL+F LLG + V+TG P Sbjct: 200 RKLDKLGCRASHTAELKFHRVRVPADHLLGGDDKLQHRMRKAREVQEEVATGAPRRKSAT 259 Query: 315 LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L + A ++ R +L A YA RR GG +ID + +AD+A I AA Sbjct: 260 LGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLATQIDAA 319 Query: 370 TALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L++R + + + R E + A++ A ++A A++ +GG GYI + Sbjct: 320 RLLTWRASWMAATGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWGYISDH 372 Query: 429 SIARHYRESPANSILLGS 446 + + YR++ +I G+ Sbjct: 373 PVEKWYRDAKLYTIFEGT 390 >gi|56965647|ref|YP_177381.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16] gi|56911893|dbj|BAD66420.1| acyl-CoA dehydrogenase [Bacillus clausii KSM-K16] Length = 380 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 35/287 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 P T+ AIG LTE G+D A+ ++ K +G Y L+G K F+++ +D +++ A Sbjct: 113 PKLATAEAIGAFCLTEPNAGSDARALQTRAVKKGEG-YVLNGSKVFITNGGEADTYLVFA 171 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + G CF+V E G+P GL + + K+G + T E+ F + +L Sbjct: 172 VTDADKGAKGISCFIV----EAGTP-GLIVGKKERKLGLAGSTTTEIIFEDCKVPQTQML 226 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353 G+ + +KI L L++ + ++ + +AEA YA R G L++ Sbjct: 227 GEEG------QGLKIALSNLNAGRIGIAAQALGIAEAALEAACTYANERKQFGKKLLNHQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+A + AA L++ A + ++EA+ A++ A T A V Sbjct: 281 GLAFKLADMATETEAAKQLTYAAARLKEAGTPCAKEASMAKLFASRT-------AMDVAT 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +A++ GG GY++E + R++R++ A I G+ + + EK Sbjct: 334 KAVQVFGGYGYMKEYPVERYFRDAKACEIYEGTSEIQKMVIARQFEK 380 >gi|229173199|ref|ZP_04300748.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3] gi|228610283|gb|EEK67556.1| Butyryl-CoA dehydrogenase [Bacillus cereus MM3] Length = 381 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGVEDNGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|149182452|ref|ZP_01860927.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus sp. SG-1] gi|148849845|gb|EDL64020.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus sp. SG-1] Length = 378 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ +D +I+ A + G + Sbjct: 124 LTEPSAGSDAGSLKSRAIK-KDDHYVINGAKVFITNGGEADVYIVFAATDPDKGGRGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLHGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +AEA YA+ R G + Q + +AD+A + Sbjct: 232 KIAMANLDVGRIGIAAQALGIAEAAFEHSTAYAKERAQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L +R AN E + +EA+ I K + K A V EA++ GG GY E Sbjct: 292 EASKLLVYRAANMRSEGLNCGKEAS-------IAKLFASKTAVDVTTEAIQVYGGYGYTE 344 Query: 427 ERSIARHYRESPANSILLGS 446 E + R +R++ I G+ Sbjct: 345 EYPVERLFRDAKVTEIYEGT 364 >gi|205375296|ref|ZP_03228086.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4] gi|205375427|ref|ZP_03228216.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4] Length = 378 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ ++ D Y L+G K F+++ +D +++ A + G + Sbjct: 124 LTEPSSGSDAGSLRTRAVLEGDQ-YRLNGSKIFITNGGEADTYVVFASTDPEKGTRGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + GL + + K+G + TV+L F + L+ N+ E KI + LD Sbjct: 183 FIVEKDTPGLVIGKDEEKMGLHGSRTVQLTFED---MLVPASNLLGAEGEGFKIAMANLD 239 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + +AEA + YA+ R G + Q + +AD+ I A+ L + Sbjct: 240 VGRIGIAAQALGIAEAAFDEAVEYAKERVQFGKPIAAQQGLAFKLADMGTAIEASKLLVY 299 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + AN E + +EA+ A++ A K A V EA++ GG GY E+ + R++ Sbjct: 300 QGANLRTEGRPCGKEASMAKLFA-------SKTAVHVTTEAIQVFGGYGYTEDYPVERYF 352 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 353 RDAKVTEIYEGT 364 >gi|119494950|ref|XP_001264273.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181] gi|119412435|gb|EAW22376.1| acyl-CoA dehydrogenase, putative [Neosartorya fischeri NRRL 181] Length = 437 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K +DG Y L+G K W +S + F++ A ++ G + Sbjct: 178 LSEPASGSDAFALQTKAEKTADG-YKLNGSKMWITNSMEAGVFVVFANLDPSKGYKGITA 236 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMK 313 + + G + + K+G R+++T L F + G LLG+ + G + + + Sbjct: 237 FVVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGR 296 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I +++ G + A + RR+ G ++ M+ +A ++IAAA AL Sbjct: 297 IGIAAQMTGLAL-GAWENAASYVWNDRRQF--GQLIGTFQGMQHQLAQAYVEIAAARALV 353 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + ++AA A K++ ++A V + A+E +GG G++ E + Sbjct: 354 YNAARKKEAGQDFVQDAAMA-------KFYASQVAGRVASSAVEWMGGMGFVREGIAEKM 406 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433 >gi|312963450|ref|ZP_07777932.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] gi|311282256|gb|EFQ60855.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] Length = 601 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 49/341 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y +SG K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + L++K+G NAT + F G+L+G N + Sbjct: 233 PKFLPNADGSIGERNAVSCGSLEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ + + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEA 415 + A+ + A D K +++ A + M PI K + ++ Sbjct: 353 MKAFAEGNRAMVYFTAKQVDIVKYGTDDEAKKQADGLLAFMTPIAKAFMTEVGFESANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|254506623|ref|ZP_05118764.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16] gi|219550496|gb|EED27480.1| acyl-coa dehydrogenase family member 8 [Vibrio parahaemolyticus 16] Length = 384 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 46/320 (14%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA T V + + K+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFATDAVKQRYCDKLVTGEW----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCY 272 K D Y L+G K F+S +D +++A+ V F+VP S G+ Y Sbjct: 140 AIKQGD-RYILNGAKAFISGAGDTDVLVVMARTSDDGAKGVSAFVVP-----ASAEGISY 193 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVS 326 R + K+G S T + F G ++ D + E + ++ A S+ Sbjct: 194 GRKEPKMGWNSQPTRSVTFD---GVVIPDDHRLGAEGEGFTFAMKGLDGGRINIATCSIG 250 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + +L +A Y + R G + D ++ +AD+A ++ AA L A D+ + Sbjct: 251 TAQQALNQATQYIQERKQFGKRIADFQSIQFRLADMATELVAARQLVRLAACKLDQ--NS 308 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 S+ AY + K + + V +A++ GG GYI+E + R++R+ + IL G+ Sbjct: 309 SDATAYC----AMAKRYATDIGFKVCDQALQLFGGYGYIQEYPMERYFRDVRVHQILEGT 364 Query: 447 GNAMVLDV-LNLLEKGTNLF 465 M L + LL +G L Sbjct: 365 NEIMRLIISRRLLAQGAQLL 384 >gi|162455189|ref|YP_001617556.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] gi|161165771|emb|CAN97076.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 389 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 17/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQV---EGRVGC 255 LG++E G+D+A I + +K D Y L+G K F+++ F+ +LA+ +G GC Sbjct: 124 LGVSEPAAGSDVAGIRTIARKEGDD-YVLNGQKTFITNGTRADFVTLLAKTSPDKGAHGC 182 Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 FLVP L G + KIGN+S+ T EL + +LLG+ + + Sbjct: 183 SFFLVPTAL-----RGFNVAKKLKKIGNKSSDTAELFLEDVRVPGRYLLGEPDQGFAYLM 237 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L +A+ +++ ++L + Y R R G +I + + + D+ AA Sbjct: 238 QNFQTERLVAAVSAIASSFMTLDGTVEYGRERVAFGKPIIKRESWQHKLVDLYTRCEAAR 297 Query: 371 ALSFRLANSF-DEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A +++ + + DE R ++ + + + K +A V+ ++ GG GYIE+ Sbjct: 298 AFAYKCVDHYNDERYVRKVPISFDTVKLISMAKILAGDVANDVVDTCLQFHGGWGYIEDF 357 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR +R+ I G+ M Sbjct: 358 PIARAWRDQRLLRIGGGTTETM 379 >gi|153006023|ref|YP_001380348.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029596|gb|ABS27364.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 598 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 59/346 (17%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL + + + + PK+ S E+ T + LTE + G+ Sbjct: 125 LCPMLTRGAIAALELKGSEELKRRYLPKLTSGEWTGT-------------MVLTEPQAGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++A+ ++ + DG Y L G K F++ D ++LA+ EG G F+V Sbjct: 172 DLSAVRTRAVRQGDGSYRLEGQKIFITYGDHDLTENIVHLVLARTPDAPEGVKGISLFVV 231 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P++L DGS N + +++K+G ++ T L F + G+L+G+ + +E Sbjct: 232 PKVLVNADGSLGPRNDVRCVSIEHKLGIHASPTAVLAFGDREGAVGWLVGEEHRG---LE 288 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I ++ A +V V LAE A+ YAR R + ++ P ++ Sbjct: 289 YM--FITMNEARYAVGLEAVGLAERAYQAALAYARERLQGTELGARSKEKVPILRHPDVR 346 Query: 357 RAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 R + + +A TA + A +A+ R+ A+ + PI K W A Sbjct: 347 RMLLLMKSRTEAMRAVACVTAAAMDAARCHPDAERRARSQAFVELTIPIVKAWSSDSAIE 406 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + ++ GG GY+EE A+ R++ SI G+ +D++ Sbjct: 407 IASLGIQVHGGMGYVEETGAAQLLRDARITSIYEGTNGIQAVDLVG 452 >gi|116695314|ref|YP_840890.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] gi|113529813|emb|CAJ96160.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] Length = 385 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 30/294 (10%) Query: 151 LMSPSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 L+ +V S LM TP W P++ + E + LTE G+ Sbjct: 85 LLGTTVGIGSQGILMDGTPEQQAAWLPRLATGE-------------ILASFALTEPDAGS 131 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSP 267 D ++ + + D Y ++G K F++ +P + F ++A+ + G V + D Sbjct: 132 DAGSLRTTAVRNGDH-YVVNGTKRFITNAPQAGMFTLMARTNPEIKGSAGVSAFIVDART 190 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAI 322 G+ + + K+G + T ++ F N L+G L G MK+L L A Sbjct: 191 PGISFGKRDVKMGQKGAHTCDVIFDNVRVPAENLIG-LKEGQGFKTAMKVLDKGRLHIAA 249 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 +SV R L +A++YA R G + + +++ +AD ++ AA + A DE Sbjct: 250 VSVGVARRVLRDALNYALERQQFGQPICEFQLIQAMLADSQAELYAAECMVIDAARRRDE 309 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++ S EA+ K + +M V A++ +GGSGYI E I R YR+ Sbjct: 310 GRNVSTEAS-------CCKMFATEMVGRVADRAVQILGGSGYISEFGIERFYRD 356 >gi|220917382|ref|YP_002492686.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955236|gb|ACL65620.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 389 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 22/255 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLV 258 L+E + G+D A+ ++ + DG +W S ++ ++ A+ E G + Sbjct: 125 LSEPQAGSDAGAMRTRAVRRGDGWVIDGAKQWITSGDVAGVLVVWARTGPAEAGGGGGVT 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311 L+E G+P GL R ++K+G R+++TV L F S G + L V+ ++ Sbjct: 185 AFLVEQGTP-GLLVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDG 243 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++ I A + +R +L ++ YAR R G + + + +AD+A++ A Sbjct: 244 GRVGI----ASQATGTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTARL 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ R A + + + EA+ A K W + A + A++ GG GY E+ +A Sbjct: 300 LALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVA 352 Query: 432 RHYRESPANSILLGS 446 R++R++ +I G+ Sbjct: 353 RYFRDARVQTIYEGT 367 >gi|169860487|ref|XP_001836878.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130] gi|116501600|gb|EAU84495.1| acyl-CoA oxidase [Coprinopsis cinerea okayama7#130] Length = 416 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 31/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ ++ +K DG + ++G K W +S ++ F++ A V+ G Sbjct: 160 LSEPASGSDAFALQTRAKK--DGNDWIINGSKMWITNSYEAEIFLIFANVDPSKGYKGIT 217 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFL + + G+ + + K+G R+++T + + + + N+ G + KI Sbjct: 218 CFLATKDM------GVQIAKKEQKLGIRASSTCTISLDD---LKVPEENIIGGIGKGYKI 268 Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I L+ + ++ + LA+ A+ Y R G + M IA A+DI Sbjct: 269 AIEILNEGRIGIAAQMLGLAQGAFDKAVPYTYERKQFGQAIGTFQGMAFQIAQAAIDIET 328 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A +++ A +E ++EAA A KYW +A V +A+E GG G+ E Sbjct: 329 ARLMTYNAARRKEEGLPFTKEAAMA-------KYWASVVAQRVSGQAIEWAGGVGFTRET 381 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I + +R+S +I G+ N + + ++K Sbjct: 382 GIEKFWRDSKIGAIYEGTSNIQLQTIAKFIQK 413 >gi|118480375|ref|YP_897526.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|196045470|ref|ZP_03112701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|225867323|ref|YP_002752701.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|229187567|ref|ZP_04314707.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] gi|118419600|gb|ABK88019.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|196023677|gb|EDX62353.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|225787815|gb|ACO28032.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|228595934|gb|EEK53614.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|27374346|gb|AAO01087.1| Arc42-PA [Drosophila willistoni] Length = 405 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W + ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGD-RWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ ++ G + ++K+G R ++T +L F + + N+ P K Sbjct: 204 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + +A+A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALE 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D +S ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDNKQSYTKEAAMAKLAASEAATLCSH-------QCIQVLGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|319763010|ref|YP_004126947.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330825090|ref|YP_004388393.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317117571|gb|ADV00060.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329310462|gb|AEB84877.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 389 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVE 250 A+ L+E+ G+D AAIT+ + DG + + G K W + S+ FI+ A Sbjct: 123 AVNFALSERGAGSDAAAITATAVREGDG-WRIRGEKCWLGNGGHSEHFIVFALTGEPGAR 181 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNV 304 + F VPR S G ++K+G R T + S+ G L + Sbjct: 182 NNISAFWVPR-----STPGAAVDFYEDKMGIRGTTTTNFKVDVWVPRSSMVGSEGHGLKL 236 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + +I++ + +++ R A +A +R G +ID + +AD A Sbjct: 237 ALSTLNIGRIVVAAQALGIALCSYRA----AAEFATQRQTFGQAIIDHQGVGFMLADAAT 292 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++AA + + A ++DE + S A A++ A + C +AM+ +GG GY Sbjct: 293 SLSAARMMVYEAAKAYDEGRDVSTLGAMAKLFASEAAHKVCD-------DAMQILGGRGY 345 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ ++ R YR+ I G+ Sbjct: 346 VKPSAVERCYRDQRITEIYEGT 367 >gi|157692556|ref|YP_001487018.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032] gi|157681314|gb|ABV62458.1| acyl-CoA dehydrogenase [Bacillus pumilus SAFR-032] Length = 380 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 P+ + GLTE G+D A ++ + + DG Y +SG K W ++ + I+ A Sbjct: 113 PLASGTALGSFGLTEPNAGSD--AKGTKTKAVKDGQEYVISGEKCWITNANFARTIIVTA 170 Query: 248 QVE----GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 + GR + F+V + GL +K+G R + T E+ N + Sbjct: 171 VSDHDEHGRPIISAFIVEK-----GQKGLTITNPYDKMGVRGSDTAEIILDNVRVPAHHI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352 LGD P + K +Y LD +S++ + V +A+A + YA+ R G L Sbjct: 226 LGD------PNKGFKQFLYTLDGGRISIAALSVGIAQAALDASLSYAKERKQFGQTLSSF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A+ I A + ++ A D K ++EAAYA++ A +MA Sbjct: 280 QAIQFKLADMAMQIELARQMVWKAAWLKDHGKPFTKEAAYAKLFA-------SEMATKAS 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG+GY++E + R R+ A + +G G + + Sbjct: 333 LDAVQIHGGTGYMKECGVERLVRD--AKLMEIGEGTSEI 369 >gi|94314426|ref|YP_587635.1| long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93358278|gb|ABF12366.1| Long-chain-acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 385 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 22/321 (6%) Query: 147 EAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 E G ++ P + + S+ + + +H ++A + +E+ P M K + GL +TE Sbjct: 77 EQGRMLCPGLGN-SLHSGIVAHYIH-NFASEQQKQEWLP----KMAKGELVGGLAITEPG 130 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLVPRLL-ED 264 G+D+ +I + +K G Y ++G K ++++ + I ++ + + +G + ++ E Sbjct: 131 AGSDVQSIRTAARK-EGGDYVINGAKTYITNGSTANLICVVVKTDPNLGAKGISIIVVET 189 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LD 319 G R +K+G S T EL F + LLG++ G + MK L + Sbjct: 190 DKVEGFRRGRTLSKVGLHSQDTAELFFDDVRVPQANLLGNVE-GQGFKQLMKELSRERVI 248 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 +A MS++ M ++ E + +A R V G L+ + +A+ + A A+ + S Sbjct: 249 TAFMSMACMERAIEETLKFAADRKVFGQTLLSMQNTRFKLAECETKLTLAKAMLSHCSAS 308 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 E + SE AA A K+W V+ E ++ GG+G++ E IAR Y+ Sbjct: 309 LLEGQLSSEIAAMA-------KWWITDACGQVVDECVQLHGGAGFMLEYPIARLYQNVRI 361 Query: 440 NSILLGSGNAMVLDVLNLLEK 460 + IL G+ M + LEK Sbjct: 362 HRILAGTNEIMKEVIARELEK 382 >gi|119474784|ref|ZP_01615137.1| putative acyl-CoA dehydrogenase protein [marine gamma proteobacterium HTCC2143] gi|119450987|gb|EAW32220.1| putative acyl-CoA dehydrogenase protein [marine gamma proteobacterium HTCC2143] Length = 614 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 96/382 (25%), Positives = 157/382 (41%), Gaps = 84/382 (21%) Query: 160 SMVALMTTPRVHKDW-----APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SM AL + + D+ PK+ + E+ T + LTE GTD+ + Sbjct: 130 SMAALWSLMALGNDFQKSVIVPKLVAGEWTGT-------------MNLTEPHCGTDLKLM 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVE----------GRVGCFLVP 259 ++ DG Y ++G K F+S ++D I ++A+V G V F+VP Sbjct: 177 KTKAVAQDDGTYRITGTKIFISGGDHDLTDNIIHMVIAKVPDDHGKLNDSLGAVNFFMVP 236 Query: 260 RLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL-----------GDLN 303 + L EDGS NG+ ++ K+G + NAT L + N + + G+ Sbjct: 237 KFLINEDGSIGEANGVSTGSIEKKMGIKGNATCVLNYDNAIAYKVPESQPKAASAGGEKK 296 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYA----RRRHVSGGILID-- 351 S + M + ++ A M V GM+ V+ A YA + R +SG D Sbjct: 297 SSVSGMAGM--FLMMNGARMGV-GMQGYAQSEVAYQNAALYANDRLQGRSLSGAKNPDGA 353 Query: 352 -QPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396 P+ M RA + A A LSF L S ++ + E+ A I + Sbjct: 354 ADPIIVFPDVRRMLMMSRAFTEGAR--ALHMWLSF-LGTSASKSTNPEEQMASGEISNLL 410 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 P+ K + M AM+C GG G+I E + + R+S N I G+ LD+L Sbjct: 411 TPVIKGYLTDMGFHCTNAAMQCFGGHGFIREHGMEQFVRDSRINQIYEGANGVQALDLLG 470 Query: 457 --LLEKGTNLFEQLFSTLEQDL 476 + G F+ +++++ Sbjct: 471 RKVFANGMQGTNAFFNMIDEEI 492 >gi|116696491|ref|YP_842067.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] gi|113530990|emb|CAJ97337.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] Length = 385 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252 I LTE G+D A++ ++ + D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGAGASG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENVRVPAANIIGGVP-GVGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YAR R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHISALACGMAHRLITDAVAYARERKQFGKPIGDFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A TK +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E R YR+ Sbjct: 349 IAEYKAERFYRD 360 >gi|229097074|ref|ZP_04228041.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29] gi|229103134|ref|ZP_04233821.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28] gi|229116036|ref|ZP_04245430.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228667431|gb|EEL22879.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228680323|gb|EEL34513.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-28] gi|228686360|gb|EEL40271.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-29] Length = 381 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|255590293|ref|XP_002535231.1| conserved hypothetical protein [Ricinus communis] gi|223523709|gb|EEF27157.1| conserved hypothetical protein [Ricinus communis] Length = 150 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 59/120 (49%) Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 A+EC+GG+G+IE+ ++ R YR++P N I GSGN + LDVL L++ + L L++ Sbjct: 1 ALECLGGAGFIEDSAMPRLYRQAPLNGIWEGSGNVICLDVLRTLQRDALAGQALRGLLKE 60 Query: 475 DLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 S + L D AR L E +AL L R +AD F+ R Sbjct: 61 AAASDRALAEKVAAIETQLRNPDPAQARLLVEDLALVLQGKLLRRHSPPALADAFIATRI 120 >gi|147677911|ref|YP_001212126.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|146274008|dbj|BAF59757.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] Length = 376 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 38/264 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---GRVG- 254 +TE G+DI AI++ +K D Y L+G K F++ ++ +I+ A + G+ G Sbjct: 120 FAMTEPCAGSDIGAISTTARKKGDE-YVLNGTKCFITQGGLAAIYIVFASTDKSKGKKGL 178 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---- 309 F+V R E G+ ++++K+G R++ TVEL +L D+ V + Sbjct: 179 SAFIVERWRE-----GISTGKVEDKMGIRASNTVEL--------ILQDVRVPASHLLGKE 225 Query: 310 -EDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + MK+ + LDS + V+ V +A E + + + R +G L Q + IAD+ Sbjct: 226 GDGMKLAMKALDSGRLMVAAQAVGVARRALDECVKFVKARVDNGKPLASQQAVSFKIADM 285 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + A L +R A D + S +A I K +C +MA V +AME +G Sbjct: 286 VAAVEAGKQLVYRGAMLKDTCQPYSRHSA-------IAKLFCTEMAIRVARDAMEIMGVY 338 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY E + + +R++ SI G+ Sbjct: 339 GYTRETYVEKIWRDARILSIYEGT 362 >gi|299530009|ref|ZP_07043436.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298721989|gb|EFI62919.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 596 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDELKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + DG Y + G K F++ M+D + +LA+V G + F+V Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358 M I++ + + G+ V S A+ YA+ R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGLQGLAVAERSYQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRM 347 Query: 359 IADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + +A A ++ A+ +A+ R + M P+ K + +M+ V Sbjct: 348 LMTMRASNEGCRAMATTAAAAYDAAHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|90416685|ref|ZP_01224615.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2207] gi|90331438|gb|EAS46674.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2207] Length = 603 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 56/356 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ ++ L T T + KD+ K+ S + T + LTE GT Sbjct: 125 MYPGLSEGAVATLETSGTEQQKKDYLVKLISGVWSGT-------------MCLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ DG Y ++G K F+S+ D I+LA++ +G G F++ Sbjct: 172 DLGLMKTKAVPNDDGSYKVNGTKIFISAGEHDLTDNIVHIVLAKLPDAPKGTKGLSLFII 231 Query: 259 PRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L EDGS NG+ +++K+G N T L F + FL+G+ N + Sbjct: 232 PKFLVAEDGSAGERNGVRCGSIEHKMGIHGNGTAVLNFDDAKAFLIGEPNQGLAAMFTYM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 + + +A + S A YAR R +SG +I+ P ++R + Sbjct: 292 NVARIGTASQGAAAAERSYQGAAKYARERLAMRSISGVKNPEGPADAIIEHPDVRRMLLT 351 Query: 362 ---IALDIAAATALSFRLANSFDEAKSRSE-EAAYARI--MAPITKYWCCKMAPAVIAEA 415 IA A + + A+ + S+ E +AA R+ PI K + ++ Sbjct: 352 QRVIAEGGRAMVTYASQFADLYRGGNSQEERDAAEIRLGFCTPILKGFITELGVEAANHG 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468 ++ GG GYI+E + + R+S ++ G+ LD++ L++K F+QL Sbjct: 412 VQVFGGHGYIKEWGMEQILRDSRIATLYEGTTGIQALDLVGRKVLMDK----FKQL 463 >gi|49477755|ref|YP_036653.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218903676|ref|YP_002451510.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|228927603|ref|ZP_04090655.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|49329311|gb|AAT59957.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218538372|gb|ACK90770.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|228832083|gb|EEM77668.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 381 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 39/269 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEG------- 251 GLTE G+D +Q + I DG Y +SG K ++++ I++ V G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTAVNGVEENGRK 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 R+ F+VP E GL +K+G R++ T E+ +LGD+N Sbjct: 181 RISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENILGDVN----- 230 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K +Y LD +S++ + V +A+ A+ YA+ R G + + ++ +AD+ Sbjct: 231 -KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNFQAIQFKLADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ A L + A D K +EAA A++ A + A + +A++ GG Sbjct: 290 ATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIANQAVQIHGGY 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 GY+ E + RH R+ A + +G G + + Sbjct: 343 GYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|304312544|ref|YP_003812142.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301798277|emb|CBL46499.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 599 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFIMLAQV----EGR 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ M+D I+LA++ +G Sbjct: 165 LTEPHCGTDLGILRTKAEPNADGSYNITGTKIFISAGDHDMADNIVHIVLARLPDAPKGT 224 Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + DGS NG+ +++K+G +++AT L F GFL+G N Sbjct: 225 KGISLFIVPKNHVNADGSIGDRNGVVCGSIEHKMGIKASATCVLNFEGARGFLIGPPNRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 285 LNCMFTFMNTARVGTAVQGIAAAELSFQGALTYAKDRLAMRSLSGPKFPEKEADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407 ++R + AL + LA D E + A +MA PI K +C + Sbjct: 345 DVRRMLLTQKAFAEGGRALIYFLAQQIDLVEEGADETSRQAADDLMAFLTPIAKAFCTET 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ ++ G+ +D+L Sbjct: 405 GLESANHGVQVYGGHGFIREWGMEQIVRDTRIATLYEGTTGVQAIDLL 452 >gi|229076818|ref|ZP_04209728.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18] gi|228706307|gb|EEL58570.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock4-18] Length = 371 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + + DG Y +SG K ++++ I++ Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAVLDGDEYVISGEKCWITNAEYANTIIVTA 160 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 161 INGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 215 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 322 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 323 NHAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359 >gi|330938539|gb|EGH42122.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 505 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 30 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 76 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 77 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 136 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 137 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 196 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 197 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 256 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A A+ + A D + + + A M PI K + ++ Sbjct: 257 MKAFAEGARAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 316 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 317 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 368 >gi|298480751|ref|ZP_06998947.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22] gi|298273185|gb|EFI14750.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. D22] Length = 568 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 50/374 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225 P H + P+I E + + LTE G+D+ ++ + DG Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199 Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + L+G K F+++ +D ++LA+ E G + + D G+ +R++NK+G + Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339 T EL + N L GD + G ++ ++ ++ A + ++ V L++A + YA Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385 + R G +I+ P + +A + + A AL ++ + D K+ Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375 Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 R E+ YA++ P+ K + A + ++ GGSG++ E + R YR++ SI Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435 Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496 G+ + + + G+ + FE + + E + L S KK+ S + KE Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEASTNAVKE 495 Query: 497 --DKGLARFLTEKI 508 D+ L F K+ Sbjct: 496 VQDQELLDFTARKL 509 >gi|297617060|ref|YP_003702219.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144897|gb|ADI01654.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 33/284 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K +TE GTD+ A T+ + DG Y ++G K F S+ P++D FI+ A Sbjct: 113 PLAKGEKIGAFAITEPGAGTDVGAATTTA--VLDGDEYVINGTKTFTSNGPVADTFIIFA 170 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTF 295 + G F+VP+ GL + K+G R++ T E+ N Sbjct: 171 WTDKSQGPKGMSAFIVPK-----EAPGLKVGQHFLKMGIRASQTSEIILKDCRVPKENLL 225 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G L ++ ++ +I I A +V M+ +L E+I Y+++R G + + Sbjct: 226 GKEGEGLKIAMASFDNGRIGI----AAQAVGIMQAALDESISYSKQRVQFGKPIARHQAI 281 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + IAD+A D+AAA L++ A ++ S+EAA A++ A + A ++A Sbjct: 282 QWMIADMATDLAAARFLTYYAAWLKEQGLPYSKEAAMAKVFA-------AEAATKHTSKA 334 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458 ++ GG GY + + R R++ I G+ A + + NLL Sbjct: 335 VQIHGGYGYCKGFKVERLMRDAKITEIYEGTSEAQRMVIAGNLL 378 >gi|253583423|ref|ZP_04860621.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725] gi|251833995|gb|EES62558.1| acyl-coA dehydrogenase [Fusobacterium varium ATCC 27725] Length = 636 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F+++ ++ +I+ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDYYILNGGKIFITNADKAETYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ YA+ R G + Q V+ +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIASQALGIAQGAFENALEYAKEREQFGKPIAFQQVISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A E K E A MA K + + ++ EA++ GG+ Sbjct: 289 ATKLRAARFLVYSAA----ELKENHENYAMESAMA---KQYASDVCLEIVNEALQIFGGT 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|55377709|ref|YP_135559.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55230434|gb|AAV45853.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 375 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 50/305 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 + S +A + V DW P++ + P+ L+E + G++ +++ Sbjct: 91 ATSCIAQFGSKAVQDDWLPEMV-------DGRPVG------AFALSEPQAGSNPREMSTT 137 Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCY 272 ++ D Y ++G K W + S I+ A+ + + FLVP+ E GL Sbjct: 138 ARRDGDE-YVINGEKQWITNGKRSGVVIVFAKADPDDPDSITQFLVPKDTE-----GLTV 191 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVSTGPVEDMKILIYLDSAI--MSVS 326 ++K+G R++ T L+F G + + G + IL AI +V Sbjct: 192 GEKEDKLGLRASDTTPLQFD---GVRVPERYQLTEEGKGLAAALSILTTGRVAIAAQAVG 248 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381 + +L EA+ YA+ R DQP+ ++ +AD+A ++ AA L++ A + Sbjct: 249 LAQSALDEALDYAKERE-----QFDQPISEFQTIQHKLADMATNVQAARLLTWNAAQQLE 303 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 R E+A R A + KY+ + A V EA++ GG GY + + R YR++ + Sbjct: 304 ----RGEDA---RAAASMAKYFASETAVEVANEAIQIHGGYGYTTDYPVERFYRDAKVTT 356 Query: 442 ILLGS 446 I G+ Sbjct: 357 IYEGT 361 >gi|316932503|ref|YP_004107485.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600217|gb|ADU42752.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 593 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 100/457 (21%), Positives = 187/457 (40%), Gaps = 60/457 (13%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDG 114 G+Y TAQ L + + L G++ KV P W +R I G Sbjct: 29 FGDYDGEITAQVLDEAGKFASDILAPLNRVGDKHGIKLEHGKVTTAPGWPDAYQRWIAAG 88 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + F A ++ + + G + P +T +++ AL T + + + Sbjct: 89 WNAVSGPEDFGGQGLPMAVNAACTEIWASSNMAFG--LCPLLTLSAIDALHTHGSDELKQ 146 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + K+ S E+ T MQ LTE + G+D+ A+ ++ ++ G Y + G K Sbjct: 147 IYLSKLVSGEWTGT----MQ---------LTEPQAGSDVGALRTRAERAEGGSYRIFGSK 193 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRL 275 F++ M+D + A +G + FLVP+ L G+ N + + Sbjct: 194 IFITYGDHDMTDNIVHFVLARLPDAPAGTKG-ISLFLVPKFLVGADGTLGARNDIYPSGV 252 Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 ++K+G ++ T + + G+L+G+ N + M L + V + Sbjct: 253 EHKLGIHASPTCTMTMGDNGGAIGYLIGEENRGMQCMFTMMNQARLAVGLEGVGIADRAY 312 Query: 333 AEAIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLA 377 +A+ YA+ R I +I P +KR A+ A I +TA++ +A Sbjct: 313 QQALAYAQERKQGRAIGSTGSGSDPIIKHPDVKRTLLTMRALTGAARTICYSTAVALDIA 372 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K ++ AA ++ PI K + + V + ++ GG G+IEE A+HYR++ Sbjct: 373 ARSTDPKVKAAAAARGALLTPIAKAFSTDIGIEVASLGVQIHGGMGFIEETGAAQHYRDA 432 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQ 474 I G+ +D++ + G N +F+ L++ Sbjct: 433 RIAPIYEGTNGIQAIDLVT-RKLGNNGGASVFALLDE 468 >gi|228933834|ref|ZP_04096680.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825906|gb|EEM71693.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 381 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM GLTE G+D +Q + I DG Y +SG K ++++ I++ Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 249 VEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 V G R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 VNGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKAISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELTRNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|167644104|ref|YP_001681767.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167346534|gb|ABZ69269.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 596 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 52/367 (14%) Query: 152 MSPSVTSASMVALMTT-PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P + + A+ T KD + PK+ S E+ T + LTE GT Sbjct: 125 MYPGLAHGAYSAIHTGGSDQQKDLYLPKMVSGEWTGT-------------MNLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ +DG Y ++G K ++S+ M+D + +LA++EG + F+V Sbjct: 172 DLGLLRTKAVPEADGSYRITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIV 231 Query: 259 PRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG----P 308 P+ L EDGS G+ L+ K+G NAT +++ + G+L+G+ N Sbjct: 232 PKFLPKEDGSVGPRNEGVKCVGLEEKMGIHGNATCVMQYEDAKGWLIGEENSGLKLMFVM 291 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQPVMKRAIA 360 + + ++ + L + + + ++A A + R ++G +I P ++R + Sbjct: 292 MNEARLGVGLQGIAQAEAAYQAAVAFAKDRLQGRSLTGPKNPEGPADPIIVHPDVRRMLL 351 Query: 361 DIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + I TAL LA+ + +R++ Y +M P+ K + + ++ Sbjct: 352 ESKALIEGGRAFLFWTALHGDLAHQHPDEATRAKAEDYMGLMTPVLKGYLTDKGFKICSD 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 AM+ GGSG+ E +++ R+ I G+ LD++ L KG F + Sbjct: 412 AMQVHGGSGFTEHFPASQYLRDVRIALIYEGTNGIQALDLVGRKLASKGGRAVMTFFQEV 471 Query: 473 EQDLGSS 479 +Q +G + Sbjct: 472 DQFIGEN 478 >gi|308475057|ref|XP_003099748.1| CRE-ACDH-3 protein [Caenorhabditis remanei] gi|308266403|gb|EFP10356.1| CRE-ACDH-3 protein [Caenorhabditis remanei] Length = 424 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 33/279 (11%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 AIG L+E G+D A+ + +K D + +SG K W ++ + F++ A E G Sbjct: 156 AIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANAEPGKG 214 Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 CFLV R E G+ + ++K+G R+++T + F N +LG+ T Sbjct: 215 YKGITCFLVDRNQE-----GVSVGKKEDKLGIRASSTCSVHFDNVRVHKSAILGEYGKGT 269 Query: 307 GPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 K I L++ + + + LA+ I Y ++R G LID M+ I Sbjct: 270 ----SYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGKRLIDFQGMQHQIG 325 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 + ++I AA L + A + EAA A++ A ++A + +E +G Sbjct: 326 QVRMEIEAARLLVYNAARMKENGIPFVREAAMAKLFA-------SQVATTATSRCVEWLG 378 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 G G+ +E + + YR+S +I G+ N + + L++ Sbjct: 379 GVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 417 >gi|229158902|ref|ZP_04286959.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] gi|228624513|gb|EEK81283.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|30023372|ref|NP_835003.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC 14579] gi|218232901|ref|YP_002370118.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|228961605|ref|ZP_04123214.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051012|ref|ZP_04194560.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] gi|229112755|ref|ZP_04242287.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|229130590|ref|ZP_04259546.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|229147881|ref|ZP_04276222.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|296505765|ref|YP_003667465.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171] gi|29898933|gb|AAP12204.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC 14579] gi|218160858|gb|ACK60850.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|228635531|gb|EEK92020.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|228652929|gb|EEL08811.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|228670589|gb|EEL25901.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|228722321|gb|EEL73718.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] gi|228798087|gb|EEM45091.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326817|gb|ADH09745.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis BMB171] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMRVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|294501895|ref|YP_003565595.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] gi|294351832|gb|ADE72161.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] Length = 375 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 127/260 (48%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ ++ D Y L+G K F+++ +D +I+ A+ G + Sbjct: 123 LTEPSAGSDAASLKTKAERKGDH-YLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312 + + + G + ++K+G + TV+L F N + V PVE+ Sbjct: 182 FIVEKTMEGFSVGKDEHKMGLHGSRTVQLHFEN--------MQV---PVENRLGEEGEGF 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +I + L++ + ++ V +AE A +YA R+ G +++ Q + +AD+ + Sbjct: 231 RIAMANLNAGRIGIAAQAVGIAEGALTAAKNYANERYQFGKLILSQQGIAFKLADMETAV 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L +R A +D+ +EA+ A++ A T A V +A++ +GG GY++ Sbjct: 291 ESAKLLMYRAAFLYDQKLPCKKEASMAKLFASQT-------AMNVAIDAIQVLGGYGYMK 343 Query: 427 ERSIARHYRESPANSILLGS 446 + + R++R++ I G+ Sbjct: 344 DYPVERYFRDAKVCEIYEGT 363 >gi|241766996|ref|ZP_04764787.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241362494|gb|EER58407.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 385 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP +W PK+ + E V LTE G+D A++ + K D Y Sbjct: 102 TPEQQAEWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKNGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K +++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPDDKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ + + V+ R+ L Sbjct: 203 GQRGAHTCDVIFDNVRVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + D +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 RDALAYALDRKQFGQPICDFQLVQAMLADSQAELYAAECMTLDAARRRDDGHNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GG+GY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356 >gi|218906520|ref|YP_002454354.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|218536716|gb|ACK89114.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|49480422|ref|YP_039334.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331978|gb|AAT62624.1| butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR RH G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|302341475|ref|YP_003806004.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075] gi|301638088|gb|ADK83410.1| Isovaleryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075] Length = 386 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 14/256 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258 LG+TE G+D+AAI ++ + D Y ++G K F+++ FI LA + E G + Sbjct: 125 LGVTEPGAGSDVAAIRAKASRQGDH-YLINGAKTFITNGADGHFITLACKTEPGAGARGI 183 Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++ D +P C +RL+ K+G ++ T EL F + L+G N + Sbjct: 184 SLIVVDLDAPGVSCTRRLE-KMGWHASDTAELTFEDVRAPLANLVGQENKGFYYIMQAFQ 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L L A M + ++ L A+ Y R+ G L + + +A+++ AA L++ Sbjct: 243 LERLACAAMGLGLAQLCLEHAVKYMGERNAFGAPLSNLQALAHRLAELSARQEAARQLTY 302 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + + + A+++A C++A V E ++ GG G +EE +AR Sbjct: 303 HAAWLYQNDLPCVAQCSMAKLLA-------CELAKRVADECLQFFGGYGLMEEYPMARLL 355 Query: 435 RESPANSILLGSGNAM 450 R+S +I+ G+ M Sbjct: 356 RDSRLGTIVAGTSEVM 371 >gi|289645155|ref|ZP_06477173.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] gi|289505032|gb|EFD26112.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] Length = 382 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 26/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256 L+E G+D +A+ ++ +DG + L+G K W +D + + A+ + CF Sbjct: 127 LSETHAGSDPSAMRTRATATTDGGFLLAGTKAWVTHGGAADFYTVFARTSDDRSSGISCF 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 + D + +GL Q + K+G R + T + FS+ L D V P + + I L Sbjct: 187 VA-----DATSDGLTTQPPERKMGLRGSPTAIVNFSDVR--LPADRLVGQ-PGQGLSIAL 238 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ V LA+ A+ YAR+R G +I+ + +AD+A + +A Sbjct: 239 SALDSGRLGIAATAVGLAQRALDDAVAYARQRTSFGKPIIEHQGLGFLLADMAAAVESAR 298 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + A D S +A+ A+++A A V +A++ GG+GY + + Sbjct: 299 ATTLAAARRRDAGLPFSRQASIAKLVA-------TDAAMKVTEDAVQVFGGAGYTHDYPV 351 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 352 ERYMREAKVMQIFEGT 367 >gi|254427489|ref|ZP_05041196.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196193658|gb|EDX88617.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 385 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 27/296 (9%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + + + R+Y AP + + ++E G+D+AA+ + K D Sbjct: 93 MATPAIAR-FGSDELRRDY----LAPAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDD 147 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G K W +SP +D F +LA +VP+ G+ + NK Sbjct: 148 -YLINGTKMWITNSPSADFFCLLANTSDAKPHVNKSLIVVPK-----DAAGITVDKPLNK 201 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 +G RS+ T ++ F N L+G + L +A S+ GM + E Sbjct: 202 LGMRSSETAQVFFDNVRVPQRNLIGQEGMGFMMQMMQFQEERLFAAANSLKGMEHVIDET 261 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I YA+ R V G LID + +A++ ++ A AL+++ + K + Sbjct: 262 IAYAKDRKVFGMSLIDNQSVHFRLAELQTEVEALRALTYQACEMYVNGKDVLQ------- 314 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A + K +++ V ++ GG+G++ E + YR+ SI G+ M+ Sbjct: 315 LASMAKLKVGRLSREVADSCLQYWGGNGFMWENPAGQLYRDGRLGSIGGGADEVML 370 >gi|332142140|ref|YP_004427878.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327552162|gb|AEA98880.1| acyl-CoA dehydrogenase-like protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 600 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/360 (20%), Positives = 150/360 (41%), Gaps = 51/360 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 + +A+++ + + + PK+ + ++ T + LTE G+ +A I Sbjct: 130 TAAAANVIKHFASSDIKNAFLPKMLTGDFTGT-------------MALTEPHAGSSLADI 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261 + + DG Y + G K ++S +SD + +LA++ G + F VP RL Sbjct: 177 RTSAKPQDDGTYRIKGSKIYISGGEHELSDNIVHLVLAKIPGGPAGVKGISLFAVPKYRL 236 Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311 DG+P N + L +K+G R + L F + G+L+G+ L + + Sbjct: 237 DADGNPDVRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLIGEPHQGLRYMFMMMNE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-------------VMKRA 358 +I + +A++ G R SL A + R D P + ++A Sbjct: 297 ARIGVGYGAAMIGYRGYRYSLEYAKDRTQGRAAPNLAPEDDPSPIINHGDVRRMLLAQKA 356 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + + + ++ + +++ R+E + ++ P+ K W + P A++ Sbjct: 357 YCEGGMSLCLYGSMLIDKMETETDSEKRTELSQLLDLLTPVFKAWPSEFGPKANDLAIQI 416 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDL 476 +GG+GY E + + +R++ N I G+ LD+L L + E L S + D+ Sbjct: 417 LGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKLWQHDGKGLEALLSRVTGDM 476 >gi|325918170|ref|ZP_08180321.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325918365|ref|ZP_08180498.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325535420|gb|EGD07283.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325535615|gb|EGD07460.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 372 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 115 LTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGITA 174 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + D G + + K+G R++AT E+EF++ L V E K + LD Sbjct: 175 FMVDTDKPGFHRGKTEPKLGIRASATCEIEFADYIAHADDVLGVEG---EGFKTAMSVLD 231 Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ V +A A + Y + R G + + + IAD+ + AA L+ Sbjct: 232 AGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLLTL 291 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A + K EAA A++ A W + +A++ GG GY +E + R++ Sbjct: 292 RAAWLKGQGKKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLERYF 344 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 345 RDAKITEIYEGT 356 >gi|126665781|ref|ZP_01736762.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17] gi|126629715|gb|EBA00332.1| acyl-CoA dehydrogenase family protein [Marinobacter sp. ELB17] Length = 600 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 44/295 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE + G+ + + ++ + DG Y L G+K ++S +S+ I +LA++ G Sbjct: 164 LTEPQAGSSLGDLRTRAEPQPDGTYRLFGNKIYISGGDHELSENIIHMVLARLPGAPLGV 223 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302 + FLVP++L EDGS N + L +K+G R + L F G+L+G+ Sbjct: 224 KGISLFLVPKILVNEDGSLGERNDVALAGLIHKMGYRGTTSTMLNFGEKDGAAGYLVGEA 283 Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------- 348 N + M +I + L S ++ +G A+ YAR R I Sbjct: 284 NNGLAAMFHMMNEARIGVGLGSVMLGYTG----YLHALEYARERRQGRPIGEKDPSAPQV 339 Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITK 401 LI P ++R + + AL + A DE K R+ A ++ P+ K Sbjct: 340 PLIRHPDIRRMLLAQKSYVEGGLALCLQGAMLVDEKKLAATDDQRNLAAGLLDLLTPVIK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 W + + A++ GG GY E + + YR++ N I G+ +D+L Sbjct: 400 SWPSRYCLEANSLAIQVHGGYGYTREYPVEQFYRDNRLNQIHEGTHGIQGIDLLG 454 >gi|229072808|ref|ZP_04206007.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] gi|228710299|gb|EEL62274.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|153808413|ref|ZP_01961081.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185] gi|149128735|gb|EDM19952.1| hypothetical protein BACCAC_02707 [Bacteroides caccae ATCC 43185] Length = 568 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 36/343 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + DG + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTARYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468 + ++ GGSG++ E + R YR++ SI G+ + + + G+ + FE + Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFEAI 466 Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 + E + L S KK+ S + KE D+ L F ++ Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEAQDQELLDFTARRL 509 >gi|111022859|ref|YP_705831.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110822389|gb|ABG97673.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 464 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 54/318 (16%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + TP WAP+ F +P N ++ ++ I +E GG+D+ + + Sbjct: 96 SSIGQAATPEQMLRWAPECFG---EPGN---LKLAALCI----SEPEGGSDVRNLRTTAT 145 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + ++D ++ A V+ +G F+VP GSP G+ Sbjct: 146 RDGD-EWVIEGHKMWIGNGGIADVHVVNATVDPDLGHRGQALFVVP----GGSP-GIELV 199 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN---------------VSTG-PVEDMKI 314 R +K+G R++ T EL+F LLG + V+TG P Sbjct: 200 RKLDKLGCRASHTAELKFHQVRVPADHLLGGDDKLQNRMRKAREVQEEVATGAPQRKSAT 259 Query: 315 LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L + A ++ R +L A YA RR GG +ID + +AD+A I AA Sbjct: 260 LGTFEQTRPMVAAQALGIARAALEYATEYANRREAFGGPIIDNQGIAFPLADLATQIDAA 319 Query: 370 TALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L++R + + + R E + A++ A ++A A++ +GG GYI + Sbjct: 320 RLLTWRASWMAAAGVEFRHGEGSMAKLAA-------SEVAVKTTERALQTMGGWGYISDH 372 Query: 429 SIARHYRESPANSILLGS 446 + + YR++ +I G+ Sbjct: 373 PVEKWYRDAKLYTIFEGT 390 >gi|326799657|ref|YP_004317476.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] gi|326550421|gb|ADZ78806.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] Length = 390 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 47/288 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG GLTE G+D + + D Y ++G K Sbjct: 116 WLPKLASGEW--------------IGAWGLTEANTGSDALNMLTTAVLEGDH-YVINGTK 160 Query: 233 -WFLSSPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 W D +++A+ G + F++ E G+P G + + +NK+G R++ T Sbjct: 161 NWITHGKSGDIAVVMARTGNKGESGGISAFMI----EKGTP-GFMHGKKENKLGMRASET 215 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 EL N LLG G + MK+L D +S++ + + +A+ AI Y Sbjct: 216 TELILDNVRVPKSNLLG--LEGEGFKQAMKVL---DGGRISIAALALGIAKGALDAAITY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +++RH G + + + IAD+A ++ AA L R A E K++ A MA Sbjct: 271 SQQRHQFGQPIANFQAISFKIADMATEVEAAELLIQRAA----EWKNKGIPVTKASAMA- 325 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ ++A V EA++ GG GY ++ + + YR++ +I G+ Sbjct: 326 --KYYASEVAVKVATEAVQIFGGYGYTKDFPVEKFYRDAKLCTIGEGT 371 >gi|258514955|ref|YP_003191177.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778660|gb|ACV62554.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 386 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC-FL 257 GLTE G+D A + D Y L+G K F+++ +D +++ A + G + Sbjct: 124 FGLTEPAAGSDAGATKTTAVLEGDN-YVLNGTKIFITNGYYADIYVITAMTDKSKGLKGI 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 ++E G+P G + + + K+G R++AT EL F N + N+ E K+ + Sbjct: 183 TAFIVEKGTP-GFTFGKKEEKMGIRASATYELVFDNC---KIPKENMLGKEGEGFKVAMA 238 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ V +A+ A++YA R G + Q + +AD+A+ I A+ Sbjct: 239 TLDGGRIGIASQAVGIAQGAYDYALNYANTREQFGKPISAQQAIAFKLADMAMKIEASRL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ + A D R Y + + + K + A V EA++ GG+GY E + Sbjct: 299 LTLKAAYMKDAGDKR-----YG-LYSAMAKCFAGDTAMEVTTEAVQICGGNGYTREYPVE 352 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 353 RMMRDAKITQIYEGT 367 >gi|306821130|ref|ZP_07454746.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550823|gb|EFM38798.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 646 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 18/268 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + + D Y L+G K F+++ +D +++ A Sbjct: 115 PLAKGEKIGAFGLTEPEAGSDAGGTQTTAELDGD-YYILNGGKIFITNAGKADIYVVFAV 173 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + +K+G RS+ T EL F N + N+ Sbjct: 174 TTPGIGTKGISAFIVEKGWDGFSFSDHYDKLGIRSSQTCELIFDNV---KVPKENLLGKE 230 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + +I + LD + ++ + +A+ A++YA++R G + Q ++ AD+ Sbjct: 231 GQGFRIAMQTLDGGRIGIASQALGIAQGAYESALNYAKQRVQFGKPIAFQQAIEFKFADM 290 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A+ + + S EAA A K + +A V +A++ GGS Sbjct: 291 ATKLRAARLLIYSAADLKEAHEDYSMEAAMA-------KKYASDIALEVCNDALQIYGGS 343 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY++ + R YR++ +I G+ M Sbjct: 344 GYMKGMDVERFYRDAKITTIYEGTNEIM 371 >gi|322435753|ref|YP_004217965.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium sp. MP5ACTX9] gi|321163480|gb|ADW69185.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium sp. MP5ACTX9] Length = 608 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 30/276 (10%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV--- 249 ++ L+E G+D ++ DG Y L+G K W + +D + + A+ Sbjct: 152 TIVAAYALSESTSGSDAVNARTRAVLSEDGQHYILNGEKMWITNGGFADLYTVFAKCLIP 211 Query: 250 ------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 E ++ FL+ R G+P G ++K+G R ++T L ++ LLG Sbjct: 212 SGKGAGEEKLTAFLIER----GTP-GFTNGPEEHKLGIRGSSTTPLILNDCKIPAANLLG 266 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ ++ + +V R +L AI YAR R G + + +++ +A Sbjct: 267 EVGKGHHIAFNILNVGRYKLGNAAVGAARHTLGNAIRYARDRKAFGKSISEFGLIQEKLA 326 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEA----------AYARIMAPITKYWCCKMAPA 410 D+A+ I AL +R D+A +++E++ +YA + I K W +M Sbjct: 327 DMAVGIYVGEALCYRTVGLIDQALAQTEKSDTPAIQRAIESYA-VECSIVKVWASEMLDF 385 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V+ E ++ G GY+EE R YR++ N I G+ Sbjct: 386 VVDETVQIFAGYGYVEEFPAERAYRDARINRIFEGT 421 >gi|226362475|ref|YP_002780253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240960|dbj|BAH51308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 26/255 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + +DG Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALACK-AAATDGGYVVNGAKAWITHGGIADFYNLFARTGEGSKGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VP+ E GL + + + K+G + T + + F L + ++I Sbjct: 186 VPKDTE-----GLTFGKPEEKMGLHAVPTTSAHYDDAFVPTERRLGAEG---QGLQIAFS 237 Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + V LA EA+ YA+ R G +ID + +AD+A + +A Sbjct: 238 ALDSGRLGIAAVAVGLAQAALDEAVAYAQERTTFGKKIIDHQGLGFLLADMAAAVDSAR- 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D A+ R Y+R A + K A V +A++ +GG GY + + Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVLGGYGYTRDFRVE 350 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 351 RYMREAKITQIFEGT 365 >gi|255690222|ref|ZP_05413897.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM 17565] gi|260624241|gb|EEX47112.1| acyl-CoA dehydrogenase family protein [Bacteroides finegoldii DSM 17565] Length = 568 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 50/374 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGI 225 P H + P+I E + + LTE G+D+ ++ + DG Sbjct: 154 NPDQHSRFIPRICQGE--------------TMSMDLTEPDAGSDLQSVMLKATYSEKDGC 199 Query: 226 YCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + L+G K F+++ +D ++LA+ E G + + D G+ +R++NK+G + Sbjct: 200 WLLNGVKRFITNGDADIHLVLARSEEGTRDGRGLSMFIYDKRQGGVNVRRIENKLGIHGS 259 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YA 339 T EL + N L GD + G ++ ++ ++ A + ++ V L++A + YA Sbjct: 260 PTCELVYKNAKAELCGDRKL--GLIK--YVMALMNGARLGIAAQSVGLSQAAYNEGLAYA 315 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------------- 385 + R G +I+ P + +A + + A AL ++ + D K+ Sbjct: 316 KDRKQFGKAIIEFPAVYDMLAIMKGKLDAGRALLYQTSRYVDIYKALDDIARERKLTPEE 375 Query: 386 RSEEAAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 R E+ YA++ P+ K + A + ++ GGSG++ E + R YR++ SI Sbjct: 376 RQEQKKYAKLADSFTPLAKGMNSEYANQNAYDCIQIHGGSGFMMEYACQRIYRDARITSI 435 Query: 443 LLGSGNAMVLDVLNLLEKGTNL-----FEQLFSTLEQD-LGSSGKKVITILRDSISLCKE 496 G+ + + + G+ + FE + + E + L S KK+ S + KE Sbjct: 436 YEGTTQLQTVAAIRYVTNGSYIATIREFETIPCSPEMEPLMSRLKKMADKFEASTNAVKE 495 Query: 497 --DKGLARFLTEKI 508 D+ L F K+ Sbjct: 496 VQDQELLDFTARKL 509 >gi|118587976|ref|ZP_01545386.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] gi|118439598|gb|EAV46229.1| acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 28/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGCF 256 LTE G+D A++ + + D Y L+G K F+S +SD + ++ + G V C Sbjct: 124 LTEPGSGSDAASLRTSARDDGDH-YILNGSKAFISGGGVSDLYAVMVRTGGEGPSGVSCL 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 LV E G+P GL + + K+G +S T ++ F SN G ++ + Sbjct: 183 LV----EKGTP-GLSFGANEVKLGWKSQPTAQVNFQDCRVPKSNLIGSEGQGFKIAMAAL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I S+ + L A+ Y + R G + D ++ +AD+A ++ AA Sbjct: 238 DGGRLNI----GACSMGAAQACLDHALAYVQERKQFGRPIADFQALQFRLADMATELEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A++ D AKS A +A + K V+ EA++ GG GY+ + Sbjct: 294 RLLLHKAASAVD-AKSHD-----ATKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYP 347 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I R++R+ + IL G+ M L + L K Sbjct: 348 IERYFRDVRVHQILEGTNEIMRLIIARQLLK 378 >gi|315503042|ref|YP_004081929.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315409661|gb|ADU07778.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 377 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 66/309 (21%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT + W P S E + + ++E G+D+A IT+ + D Sbjct: 102 LTTEEQKQRWLPGFCSGE-------------IVTAIAMSEPGAGSDLAGITTTAVRDGDD 148 Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKN--K 278 + L+G K F+S+ ++D +++A+ + GR G L+ ++E G P ++R +N K Sbjct: 149 -WVLNGQKTFISNGILADLVVVVARTDPGAGRRGISLL--VVERGMPG---FERGRNLDK 202 Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 +G ++ T EL FS+ F +L+ +L P+E + I A+ + Sbjct: 203 LGQKAQDTAELFFSDVRVPAANLLGAEGEGFAYLMRNL-----PLERLSI------AVAA 251 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD--IAAATALSFRLANSF-D 381 ++G A+ + Y ++R G R I + + A A RL F D Sbjct: 252 LAGAETVFAQTLDYCKQRQAFG----------RPIGSFQHNRFVLAELATELRLGRVFVD 301 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A MA K+WC ++ V+ ++ GG GY+ E +AR Y ++ + Sbjct: 302 NCLVAPDLTAETAAMA---KWWCTELQQRVVDRCLQLHGGYGYMREYPVARAYLDARVQT 358 Query: 442 ILLGSGNAM 450 I G+ M Sbjct: 359 IYGGTTEIM 367 >gi|260903040|ref|ZP_05911435.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037] gi|308108326|gb|EFO45866.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ4037] Length = 384 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLF 465 + RH+R+ + IL G+ M L + LL +G L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRLIISRRLLTEGVELL 384 >gi|229105933|ref|ZP_04236557.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] gi|228677507|gb|EEL31760.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] Length = 379 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TNPESKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|197105827|ref|YP_002131204.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196479247|gb|ACG78775.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 374 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 41/259 (15%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEG 251 AIG LTE G+D AA+ ++ ++ G Y L+G K F++S ++ F + G Sbjct: 116 AIGAFALTEADAGSDAAAVRTRATRVPGG-YRLNGAKQFITSGKIAKLAIVFAVTDPDAG 174 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297 + G FLVP G ++++K+G ++ T L F + F G+ Sbjct: 175 KRGLSAFLVPT-----DRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGY 229 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + N+ TG +I I A SV + +L A+ YAR+R G +I+ + Sbjct: 230 GIALSNLETG-----RIGI----AAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGF 280 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A + AA L A D + +A+ A++ A T A AV++ A++ Sbjct: 281 RLADLATRLEAARQLVLSAAALKDAGEPALRQASMAKLFASET-------AEAVVSGAIQ 333 Query: 418 CIGGSGYIEERSIARHYRE 436 +GG GY+EE +A+ YR+ Sbjct: 334 TLGGYGYLEEFGLAKIYRD 352 >gi|212697486|ref|ZP_03305614.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM 7454] gi|212675485|gb|EEB35092.1| hypothetical protein ANHYDRO_02056 [Anaerococcus hydrogenalis DSM 7454] Length = 400 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 18/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE GTD + + K+ Y L+G K F+++ ++ +I+ A + G + Sbjct: 144 FALTEPNAGTDASGQQTVA-KLDGDEYVLNGTKIFITNGGYAETYIVFAMTDKSKGNHGI 202 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + L+NK+G ++T+EL F + + N+ + KI + Sbjct: 203 SAFIVEKGTKGFDFGTLENKMGINGSSTMELIFQDC---RIPKENLLGEEGKGFKIAMAT 259 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +AE A+ Y++ R G L + +A++A++I AA L Sbjct: 260 LDGGRIGIAAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAARHL 319 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A+ D ++ S AA A++ A T A V A++ +GG GYI+E + R Sbjct: 320 VYKAASLKDAGENYSVAAAMAKLKASRT-------ASYVANRAVQILGGYGYIKEYDVER 372 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R++ I G+ M++ V Sbjct: 373 MMRDAKITEIYEGTSEVMLMVV 394 >gi|84495592|ref|ZP_00994711.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84385085|gb|EAQ00965.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 391 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 22/342 (6%) Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREY 183 F V Q I A L A +E+G S + +A + TP + + Sbjct: 55 FPESVGGQGGSIVDANLVTEAIIESGG--SGGLIAALFTHGIATPHIVSSGDAHLIDTYV 112 Query: 184 DPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243 PT + + L +TE GG+D+A I + ++ D + ++G K F++S + F Sbjct: 113 RPTLDGQLIGS-----LAVTEPSGGSDVAGILTTARRDGDD-WIVNGAKTFITSGVRADF 166 Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + A G G + L+ D GL R K+G + T EL F + ++G Sbjct: 167 LTTAVRTGDPGHGGISLLVIDKDSPGLTVSRPLRKLGWHCSDTAELSFDDVRVPGHHIVG 226 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ + + + L+ A + + + A A+ YA RH G L + V++ + Sbjct: 227 QVHSGFALIMEQFVSERLNLATQAHATASRATALAVAYAGTRHTFGRSLSQRQVIRHLLV 286 Query: 361 DIALDIAA-------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 D+A AA A + LA S D + E+ A + A K + A V++ Sbjct: 287 DMARRTAAARALTRQAITYAAELAESSDAPDA--EQRRKATLEAVFAKNTAVEAAERVVS 344 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +A++ GG GY+ E + RHYR+ + +G G VL+ L Sbjct: 345 DAVQIFGGMGYMRESEVERHYRD--VRILGIGGGATEVLNDL 384 >gi|218777966|ref|YP_002429284.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759350|gb|ACL01816.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 606 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 67/351 (19%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 ++ M+ T + PKI + E+ T + LTE GTD+ A+T+ Sbjct: 135 TSDMIEKYGTQEQKDLYIPKITTGEWGGT-------------MLLTEPDAGTDVGALTTT 181 Query: 218 GQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-- 264 K DG Y L+G+K F+++ D +LA++EG + F+VP+ + Sbjct: 182 AVKNDDGTYSLTGNKIFITNGEHDLCENIIHPVLARIEGDPAGTKGISIFIVPKYFVNPD 241 Query: 265 ---GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318 G N + +++K G +++AT ++ + GFLLG E MK++ + Sbjct: 242 GSLGDRNDILCTGVEHKHGIKASATCQMSMGSKGKCIGFLLGK------EREGMKVMFNM 295 Query: 319 DSAIMSVSGMR------VSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIA 360 + +G++ S +A++YAR R I +I+ P ++R + Sbjct: 296 MNGARMATGLQALAYASASYLDALNYARDRIQGRSIDDMANHGAPPVAIINHPDVRRNLL 355 Query: 361 DIALDIAA-------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + + ++ L+ + A + DE + + Y +M P+ K + + V Sbjct: 356 WMKSYVCGFRSFFQYSSMLATKAAMAEDEEERKLNNGLY-ELMTPLIKAYLSDLGYEVCV 414 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG 461 + ++ GG G+ ++ ++ R+ SI G+ +D+L +EKG Sbjct: 415 QGIQVYGGVGFCQDFLAEQYARDCKITSIYEGTSGIQSMDLLGRKLGMEKG 465 >gi|77461387|ref|YP_350894.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77385390|gb|ABA76903.1| putative dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 592 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + + G+ N +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVNADGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S AI YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK + A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466 + GG GYI E + R+ I G+ LD++ G+ F Sbjct: 406 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465 Query: 467 QLF--------STLEQDLGSSGKKVITILRDSISLCKE 496 +LF +T DLG K L D++ E Sbjct: 466 KLFADEIRHFTATASADLGEFTKP----LNDAVDTLDE 499 >gi|209965427|ref|YP_002298342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] gi|209958893|gb|ACI99529.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] Length = 599 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 44/298 (14%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI- 244 APM + L+E + G+ +A I + DG Y ++G K ++S+ +S+ + Sbjct: 151 APMLTGRFFGTMALSEPQAGSSLADIRTSAAPEPDGSYSITGTKQWISAGEHELSENIVH 210 Query: 245 -MLAQVEGR------VGCFLVP--RLLEDGSPNGLCYQRLK---NKIGNRSNATVELEFS 292 +LA+++G + F+VP R+ EDGS G RL +K+G R + L F Sbjct: 211 MVLARIKGAPAGVKGISLFIVPRFRVAEDGSLQGDNDVRLVSLLHKMGYRGTTSTILSFG 270 Query: 293 NTF---GFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 GFL+G N + M +I + L +A + +G R SL YAR R Sbjct: 271 EAGRCQGFLVGQENQGLACMFHMMNEARIGVGLGAAALGYAGFRYSL----DYARTRPQG 326 Query: 346 GGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 P +KR + A AL A DE K+ E AA R Sbjct: 327 RPPEARDPASPMIPIAGHADVKRMLLQQKAASEGALALCLYCARLVDEQKTAPEPAARER 386 Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 I+ P+ K W + A++ +GG GY + + ++YR++ N I G+ Sbjct: 387 AGLLLDILTPVAKSWPSEHCLEANKWAIQILGGYGYTRDYPVEQYYRDNRLNPIHEGT 444 >gi|83643932|ref|YP_432367.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83631975|gb|ABC27942.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 376 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 15/280 (5%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W I + P+ +Q +A L +TE GG+D+A + + + D Y ++G K Sbjct: 99 WGSPILQNKVIPS---VLQGEKIA-ALAITEPGGGSDVANLQTHAVRKGD-FYRINGSKT 153 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 F++S F +A G G + +L + NG + K+G ++ T EL F++ Sbjct: 154 FITSGHRADFYTVAVRTGGEGHGGISLILVERDRNGFSTGQPLKKMGWWASDTAELFFND 213 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 L+G N + ++ L +IM+ +++ +A+ YAR+R G + Sbjct: 214 CLVPAENLIGPENSGFIAIMSNFLMERLALSIMAYMTAQIAYEQALSYARQRDAFGRKIA 273 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 V+K + ++A + A + +A + +E A A K +C + A Sbjct: 274 KFQVIKHRLVEMATQVDIARNYTLNIAQRIQNGDNPIKEVAMA-------KNFCSQAAQE 326 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V A++ GG GY+ E + R YR++ SI GS M Sbjct: 327 VTNAAVQIHGGMGYMRESVVERLYRDARILSIGGGSTEIM 366 >gi|73537997|ref|YP_298364.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72121334|gb|AAZ63520.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 379 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 53/295 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ S EY + +G+TE G+D+ AI + + D Y ++G K Sbjct: 112 WLPKVCSGEY-------------VLAIGMTEPGTGSDLKAIRTTAVRDGDE-YVINGSKT 157 Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+S+ + +D IM+ + + G V ++ + G R +K+G + T EL F Sbjct: 158 FISNGLNADLIIMVCKTDPAAGARGVSLIVVEADREGFRRGRKLDKVGQHAQDTAELFFD 217 Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 N F +L+G+L P E + I AI + + + L ++Y Sbjct: 218 NVRVPVGNLLGEEGRGFAYLMGEL-----PQERLSI------AISAAAKLETCLEHTLNY 266 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARI 395 + R + D K +ADI A A A+ + + E R EEAA Sbjct: 267 VKERKAFNQTVWDFQNTKFKLADIK---AQAIAVRLMVDHYLGEHIRRRLTLEEAA---- 319 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I K + + + E ++ GG GY+ E +AR + +S I G+ M Sbjct: 320 ---IAKLYATEALGKALDEMVQLHGGYGYMMEYPVARAFADSRVTRIYGGTSEVM 371 >gi|116053168|ref|YP_793489.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|313110055|ref|ZP_07795958.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|115588389|gb|ABJ14404.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|310882460|gb|EFQ41054.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 600 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 46/308 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + +DG Y + G+K F+S P+S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGSYRIKGNKIFISGGDHPLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L + G N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 + G+L+G L + + +I + + + ++ +G SL YAR R Sbjct: 271 DNGACVGYLVGKPHHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQG 326 Query: 343 HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + G P + ++A + A D+ A F + + ++ + R + Sbjct: 327 RLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQ 386 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 387 AHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHG 446 Query: 449 AMVLDVLN 456 LD+L Sbjct: 447 IQSLDLLG 454 >gi|229087252|ref|ZP_04219396.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus Rock3-44] gi|228696042|gb|EEL48883.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus cereus Rock3-44] Length = 381 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 47/300 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W PK S EY + +TE G+D+A+I + +K D Y Sbjct: 103 TEEQKKRWLPKCVSGEY-------------ITAIAMTEPGAGSDLASIRTTARKEGD-YY 148 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ + +D I++ + + +V G L+ +LE G ++LK KIG Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTKVKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 S T EL F N + S E+ K YL + + V++A Sbjct: 206 LHSQDTAELIFENV------KVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKTAAEV 258 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYARI-- 395 H++ + ++ + I+D + FRLA + E K+ ++ A + Sbjct: 259 MLHITKKYVKERKAFGKHISDFQ-------TVQFRLAEMYTEIEIGKTFVDDCITAHMNG 311 Query: 396 -----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W +A V E ++ GG GY+EE IAR YR+ P +SI G+ M Sbjct: 312 ENIVTKVSMAKWWLTDLAKKVSTECIQLHGGYGYMEEYEIARRYRDIPVSSIYAGTNEIM 371 >gi|184157723|ref|YP_001846062.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|332876406|ref|ZP_08444175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|183209317|gb|ACC56715.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|322508030|gb|ADX03484.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323517616|gb|ADX91997.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332735416|gb|EGJ66474.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 600 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353 + + +A+ ++ +S A+ YA+ R +SG D+ P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q S + + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIDQFISQHQSNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAAS 521 >gi|24216326|ref|NP_713807.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|45656481|ref|YP_000567.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24197600|gb|AAN50825.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|45599716|gb|AAS69204.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 437 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 20/283 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM + +TE G+D+AAI + +K+ D Y L+G K W ++ +D F +L + Sbjct: 162 PMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDE-YILNGSKMWITNAGYADWFFVLTK 220 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301 + G + + D G+ + + +G + + T + F + G Sbjct: 221 TDPSAGHKGITGFIVDSKTPGIIMGKKEINMGQKCSDTRGITFEDVKVPAWQMIGREGEG 280 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ G + + + AI +V R ++ +I YA R+ G +++ + IA+ Sbjct: 281 FKIAMGAFDHTRPGV----AIGAVGVARAAMEHSIQYANTRNTFGRPIMENQGISFMIAE 336 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A DI A L ++ A D + +A+ I K +C M V +A++ +GG Sbjct: 337 MARDIEAGRLLCYQAAWMIDNGFRNTYQAS-------IAKMFCADMCMRVCTDAVQVLGG 389 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G+ E + + R++ I G+ + V L G + Sbjct: 390 YGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 432 >gi|195450120|ref|XP_002072373.1| Arc42 [Drosophila willistoni] gi|194168458|gb|EDW83359.1| Arc42 [Drosophila willistoni] Length = 405 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W + ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGD-RWVLNGTKAWITNGYEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ ++ G + ++K+G R ++T +L F + + N+ P K Sbjct: 204 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDC---EIPKENILGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + +A+A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQSIQQKIADMSLALE 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D +S ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDNKQSYTKEAAMAKLAASEAATLCSH-------QCIQVLGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|195112096|ref|XP_002000612.1| GI22432 [Drosophila mojavensis] gi|193917206|gb|EDW16073.1| GI22432 [Drosophila mojavensis] Length = 406 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ + SD Y L+G K W ++ ++A ++ A ++ + Sbjct: 148 LSEPGNGSDAGAASTVATEKSD-RYVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGISA 206 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + D G + ++K+G R ++T +L F + + N+ G KI + LD Sbjct: 207 FIVDKGIKGFSLGKKEDKLGIRGSSTCQLIFEDCE---IPKENLLGGTGLGFKIAMQTLD 263 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++G + +A+A + YA++R G + +++ IAD++L + +A L++ Sbjct: 264 AGRIGIAGQALGIAQASLELAVDYAQKRQAFGKPISKLQAIQQKIADMSLAVESARLLTW 323 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D ++EAA A++ A C + ++ +GG GY+ + + RHY Sbjct: 324 RAAWLKDNKLPYTKEAAMAKLAASEAATLCAH-------QCIQVLGGMGYVTDMAAERHY 376 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 377 RDARITEIYEGT 388 >gi|308450853|ref|XP_003088452.1| hypothetical protein CRE_07946 [Caenorhabditis remanei] gi|308247223|gb|EFO91175.1| hypothetical protein CRE_07946 [Caenorhabditis remanei] Length = 377 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE + G+D A+ + Q+ D + ++G K F++S ++ V + + C Sbjct: 123 LTEPQAGSDAGALLCKAQRDGDS-WVINGTKQFITSGQHAQVAIVFAVTDKSAAKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP E G R+++K+G + T + F N + N+ E KI Sbjct: 182 FIVPTNTE-----GYIVSRIEDKMGQHCSDTATIVFENC---RIPAENILGNEGEGYKIA 233 Query: 315 LIYLDSAIMSVS----GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L+S + ++ GM R +L A+ YA +R G L+ + +AD+A I AA Sbjct: 234 LSNLESGRIGIAAQCVGMARAALDAAVEYANQRKAFGVELVQHQAVAFRLADMATQIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A+ D + +EA+ A++ A ++A V ++A++ GG GY+ + Sbjct: 294 RQLIYHAASLKDAGLACLKEASMAKLFAS-------EIAEKVCSDAIQIHGGYGYVADFP 346 Query: 430 IARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 347 VERIYRDVRVSQIYEGASD 365 >gi|307545729|ref|YP_003898208.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] gi|307217753|emb|CBV43023.1| acyl-CoA dehydrogenase domain protein [Halomonas elongata DSM 2581] Length = 595 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 42/334 (12%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + P +T+ ++ AL+ H D ++ Y AP+ + + LTE + G+D+ Sbjct: 125 LCPMLTAGAIEALIQ----HGD---EVLCERY----LAPLVEGRWTGTMNLTEPQAGSDL 173 Query: 212 AAITSQGQKIS-DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLVP 259 + + ++ + DG+Y L+G K F++ D ++LA++ EG G FLVP Sbjct: 174 SLVRTRAEPSGEDGVYRLTGQKIFITWGEHDCAENIVHLVLARLPDAPEGNKGISLFLVP 233 Query: 260 RLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVED 311 + L +DG+P N + L++K+G + T L F G+L+G+ + Sbjct: 234 KFLVDDDGAPGERNDVVCTALEHKMGIHGSPTCVLSFGEREGAIGYLVGEPGRGLNHMFT 293 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 M I + + +A+ YAR RR+ + + + +KR + + Sbjct: 294 MMNAARHKVGIQGIGVAERACQQALAYARERRQGRRNGAECAIAEHLDVKRMLLSMRART 353 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420 A AL+ A D+A+ EE R ++ P+ K + A + + ++ G Sbjct: 354 DALRALALTCAAQMDKARHAEEEETRQRAQARVDVLIPVVKAFSTDQAVEIASLGIQVHG 413 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 G GYIEE A+ R++ I G+ LD+ Sbjct: 414 GMGYIEETGAAQLLRDARIAPIYEGTNGIQALDL 447 >gi|228991442|ref|ZP_04151395.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228768287|gb|EEM16897.1| Butyryl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 381 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + DG Y +SG K W ++ ++ I+ A Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP + GL +K+G R++ T E+ + Sbjct: 171 INGVEENGKKRISAFIVPT-----TSKGLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|120436729|ref|YP_862415.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803] gi|117578879|emb|CAL67348.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803] Length = 388 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 123/257 (47%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L ++E GG+D+A + + K D Y ++G K F+++ + +D +++ A+ G + Sbjct: 124 LCISEPFGGSDVAGMKTTAVKKGDK-YIINGSKTFITNGVYADFYVVAAKTAPEKGNKGM 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L D G+ +L NK+G R++ T EL F N +LLG+ + + Sbjct: 183 SMFLVDKEVKGISATKL-NKLGWRASDTAELAFDNVEIPEEYLLGEEGKGFNYIMQHFAM 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L I + + +L A+ Y + R G L V++ ++A++ ++ ++ Sbjct: 242 ERLIMGINAHARSEFALDYAMGYMKEREAFGKTLDKFQVLRHSLAEMVSEVEVIKEFNYA 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A ++ +EA+ ++++A K+A V+ + ++ +GG GY+E+ +AR R Sbjct: 302 TAQRLNDGDYVVKEASMSKLLA-------TKIADEVMYKCLQMLGGYGYMEDYPMARLLR 354 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 355 DSRLGPI--GGGTSEIL 369 >gi|319760924|ref|YP_004124861.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330822828|ref|YP_004386131.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317115485|gb|ADU97973.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329308200|gb|AEB82615.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 382 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 26/265 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + + ++ G Y ++G K F++S M + +A G G V Sbjct: 128 LAITEPGGGSDVAQLATTARR-DGGHYVVNGSKLFITSGMRADWFTVAVRTGGPGAAGVS 186 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL G GL L+ K+G ++ T E+ F++ LLGD + IL+ Sbjct: 187 LLLVPGDTPGLTRSPLQ-KMGWWASDTAEIGFTDCRVPVENLLGDEG------QGFAILM 239 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L A + +V L +A+ +AR R G L ++ V++ + D+A I A Sbjct: 240 RNFNHERLALAAAACGYAQVCLHDAVAWARERRTFGQPLSERQVIRHRLVDMATRIEATR 299 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL LA+ D +S + + A A+ A T +C A++ +GG G++ + Sbjct: 300 ALLDDLASRLDAGESPAAQIAMAKNFATRTFQFCADA-------AVQILGGMGFMRGTRV 352 Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455 R YRE +++G G V+ L Sbjct: 353 ERLYRE--VKVMMIGGGAEEVMKDL 375 >gi|262201939|ref|YP_003273147.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085286|gb|ACY21254.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 366 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 40/291 (13%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W PK+ S E V + +TE G+D+ + ++ + D Y + G Sbjct: 96 KTWLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKTKAIRDGDD-YVIDGS 141 Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ +D I++A+ + G + +L + +G R+ +K+G R T EL Sbjct: 142 KTFITNGAQADLIILVAKTDVSEGAKGISLILVEAERDGFRRGRVLDKVGQRGQDTSELF 201 Query: 291 F-------SNTFGFLLGDLNV---STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 F SN G G + + P E + I A+ SV+GM +LA + Y + Sbjct: 202 FDGVRVPTSNLLGAEEGQGFIQLMAQLPQERLII------AVASVAGMETALAHTLAYTK 255 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPI 399 R G + K +A++A + R+A F D+ ++ + + Sbjct: 256 ERTAFGRPVFGFQNTKFKLAEVATET--------RIARVFVDDCITKHLDGELDIPTVAM 307 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W A V E ++ GG GY+ E IAR + + I G+ M Sbjct: 308 AKWWTSDRAMVVADECLQLFGGYGYMNEYPIARMWSDQRVQKIYAGTNEIM 358 >gi|83859140|ref|ZP_00952661.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83852587|gb|EAP90440.1| Glutaryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 395 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 38/297 (12%) Query: 146 LEAGHLMSPSVTSASMV----ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200 +++G+ + SV S+ ++ A T + HK + PK+ S EY +G Sbjct: 96 IDSGYRSAMSVQSSLVMYPIEAFGTEEQKHK-YLPKLASGEY--------------VGCF 140 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE GG+D A+ + +K +DG Y L+G K W +SP+SD ++ A+++G + F+V Sbjct: 141 GLTEPDGGSDPGAMRTTARK-ADGGYVLNGAKMWITNSPISDLAVVWAKLDGEIRGFIV- 198 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 D G +++ K+ R++ T + ++ F LL + GP + Sbjct: 199 ----DKGTEGFDCPKIEGKLSLRASITGSISLNDAFVPEENLLPHVKGLRGPFSCLNKAR 254 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 Y A ++ L A YA R V G + ++++ +AD+ +IA + L Sbjct: 255 Y-GIAWGAMGAAEFCLHAARDYAMERVVFGKPIAGTQLVQKKLADMQTEIALGYQGALAL 313 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D + A+ + K C A A+ EA + GG+G EE I RH Sbjct: 314 GRMLD-------QGAWIPEAISMMKRNNCGKALAIAREARDIHGGNGIAEEYHILRH 363 >gi|148360485|ref|YP_001251692.1| short chain-specific acyl CoA dehydrogenase [Legionella pneumophila str. Corby] gi|296106448|ref|YP_003618148.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|148282258|gb|ABQ56346.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila str. Corby] gi|295648349|gb|ADG24196.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|307609660|emb|CBW99167.1| hypothetical protein LPW_09511 [Legionella pneumophila 130b] Length = 384 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 153/380 (40%), Gaps = 55/380 (14%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P + WD+ + P +LR + G+ + E + Q ++ AA ++ QL Sbjct: 26 PMADFWDEQGYFPI--EILREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78 Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 G + + + S AS+V + + K W PK+ S E V LT Sbjct: 79 GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262 E G+D A++ ++ K + Y L+G K F+S +SD ++ + + + L+ Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310 E +P GL + +L+ K+G R+ T L F N GF + LN G Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ G L + Y R G L ++ AD+ D AA Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +R A + D A + + K +A + +AM+ GG GY+ + I Sbjct: 295 LMVYRAAAAMDNDDPN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348 Query: 431 ARHYRESPANSILLGSGNAM 450 R +R+ + IL G+ M Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368 >gi|6978433|ref|NP_037216.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Rattus norvegicus] gi|2492630|sp|P70584|ACDSB_RAT RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SBCAD; AltName: Full=2-methyl branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD; AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase; Short=2-methylbutyryl-CoA dehydrogenase; Flags: Precursor gi|1498500|gb|AAB17136.1| short-branched chain acyl-CoA dehydrogenase precursor [Rattus norvegicus] gi|149061278|gb|EDM11701.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b [Rattus norvegicus] Length = 432 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 31/287 (10%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 K+F + KA V LG L+E G+D A+ ++ K S Y ++G K Sbjct: 148 KLFRKHGTEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFALKTRADK-SGNYYVINGSKM 206 Query: 233 WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 W ++ ++ F++ A V+ G CFLV R E G R +NK+G R+++T Sbjct: 207 WISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTE-----GFQIGRRENKMGIRASSTC 261 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341 +L F N + + +V K I L+ + ++ + LA+ I Y + Sbjct: 262 QLTFENV---KVPETSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKE 318 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + D ++ +A +A + AA L++ A + + +EA+ A K Sbjct: 319 RMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNAARLVEAGRPFIKEASMA-------K 371 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 Y+ ++A ++ +E +GG GY ++ + + +R++ +I G+ N Sbjct: 372 YYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGTSN 418 >gi|163943029|ref|YP_001647913.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229014510|ref|ZP_04171628.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] gi|229064991|ref|ZP_04200289.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] gi|229136160|ref|ZP_04264913.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|229170050|ref|ZP_04297741.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|163865226|gb|ABY46285.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis KBAB4] gi|228613397|gb|EEK70531.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|228647319|gb|EEL03401.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|228716292|gb|EEL68004.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] gi|228746860|gb|EEL96745.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] Length = 379 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPSSGSDAGGMRTTAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPDSKQRGTSAFIVESDTLGFSVGKKESKLGIRSSPTTEIIFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A++ + YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQSALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|229085274|ref|ZP_04217516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] gi|228697993|gb|EEL50736.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] Length = 569 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 43/329 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLSEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 TWTLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y + R L+D +++ IA++ + A + ++R A D+A S+E+ ++ Sbjct: 283 QYGKERKQFQKELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDDAIHESDESIMQKMS 342 Query: 397 A-----PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAMECAINKVNASETLGNIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK-----GTNLFEQLFSTLEQD 475 L V +L K G + E F +E++ Sbjct: 403 LTVAKMLMKETKSLGDQVEEDTFENVERN 431 >gi|222109369|ref|YP_002551633.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221728813|gb|ACM31633.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 385 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W PK+ + E V LTE G+D A++ + K D Y Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKDGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K +++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ + + V+ R+ L Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + D +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 RDALAYALERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GG+GY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356 >gi|302341942|ref|YP_003806471.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301638555|gb|ADK83877.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 548 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 34/341 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259 ++E +GG+DI A + D Y L G K+F S+ +D ++ A+V G + G F+VP Sbjct: 180 MSEIQGGSDIPANLLEAVPAGDH-YLLHGSKFFCSAMQADYAVVTAKVSGGEKPGAFIVP 238 Query: 260 RLL----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--DLNVSTGPVEDMK 313 L E N R+K K+G T E+E+ + +G D V+ V + Sbjct: 239 AWLPGDKEREKRNACRINRIKWKMGTAELPTAEVEYDGAVAYAVGPTDRGVANA-VGVVL 297 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L L S + M + EA Y++ R V G + P+ + + TA + Sbjct: 298 TLSRLTVGFSSAAAMVRAAREAGLYSQFRDVFGQKICQTPLAAHQLRGMINTSRRTTAAA 357 Query: 374 FRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 F++ F +E + + R + I K AP VI +AM G Sbjct: 358 FKVFGLFVSLGRRLQGGLDSNEPLAMRRKRFLLRELIIIQKLVTAFEAPEVIRQAMSIFG 417 Query: 421 GSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSS 479 G G IE+ S+ R YR++ N + G N +++ L L + + + G+ Sbjct: 418 GHGVIEDFVSLPRLYRDAAVNELWEGPRNVLLMQALRDLLRVQGWYPAADFVADMLAGAQ 477 Query: 480 GKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520 +V + + LA F+ + A+ ++A ++ RA Sbjct: 478 PARVAELAAE----------LAGFMADPPAVEATAQSMARA 508 >gi|115461843|ref|NP_001054521.1| Os05g0125500 [Oryza sativa Japonica Group] gi|47900455|gb|AAT39231.1| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group] gi|57863927|gb|AAS90672.2| putative isovaleryl-CoA dehydrogenase [Oryza sativa Japonica Group] gi|113578072|dbj|BAF16435.1| Os05g0125500 [Oryza sativa Japonica Group] gi|215694715|dbj|BAG89906.1| unnamed protein product [Oryza sativa Japonica Group] gi|222630047|gb|EEE62179.1| hypothetical protein OsJ_16966 [Oryza sativa Japonica Group] Length = 409 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 14/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K+ DG Y ++G+K W + P + ++ A+ + G + Sbjct: 151 LAMSEPNSGSDVVSMKCKAEKV-DGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGI 209 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P Q+L +K+G R + T EL F N F L V M + Sbjct: 210 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLD 268 Query: 318 LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ +++ + M+ L A+ Y R+R G + + ++ +AD+ + ++ + + Sbjct: 269 LERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVY 328 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A D K ++ A + A + A V +A++C+GG+GYI E R Sbjct: 329 SVARDCDNGKVDRKDCAGVILFA-------AERATQVALQAIQCLGGNGYINEYPTGRLL 381 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 382 RDAKLFEIGAGT 393 >gi|293608460|ref|ZP_06690763.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829033|gb|EFF87395.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 600 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPQYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q + L S +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLMDQFIGQQQSSGTLKSYQEKLAELKQQWLSLTKMIAEKAKHNPEEIGAAS 521 >gi|261334054|emb|CBH17048.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma brucei gambiense DAL972] Length = 411 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 43/275 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ + E+ IG +G++E GTD+ + + K S+G Y L+G K Sbjct: 144 WLPKVLTGEH--------------IGAMGMSEPGAGTDVLGMLTTATKESNGKYILNGGK 189 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + ++D ++ A+V+G + F+V + +G + +K G R + +L F Sbjct: 190 TWVTNGTVADLVLVYAKVDGEITAFVVEK-----GASGFSVGKKIDKCGMRGSHMCQLFF 244 Query: 292 SNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 N +LG+ N+ G V M+ L+ ++++ M V +A+ YA R Sbjct: 245 DNV---VLGEENLLGTEGKGLVAMMR---NLEVERLTLAAMAVGIADRCVELMTCYANER 298 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + ++R IA+ + AA +L++ ++ S R+ + K Sbjct: 299 KTFGKHIWNYGQIQRYIAETFAETEAAKSLTYAVSRSVAPGNCN-------RLGSDAVKL 351 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + +A AM+ +GG GY + + R +R++ Sbjct: 352 FAAPVAKRAADNAMQVMGGMGYARDMPVERLWRDA 386 >gi|153941172|ref|YP_001392122.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum F str. Langeland] gi|170754517|ref|YP_001782454.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum B1 str. Okra] gi|152937068|gb|ABS42566.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum F str. Langeland] gi|169119729|gb|ACA43565.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum B1 str. Okra] gi|295320127|gb|ADG00505.1| acyl-CoA dehydrogenase family protein/electron transfer protein [Clostridium botulinum F str. 230613] Length = 635 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLEGDHYILNGEKIFITNAGEADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + + G + + +K+G RS+AT EL +L D+ V P Sbjct: 172 TTPNIGTRGISAFIVEKTFEGFSFGKHYDKMGIRSSATAEL--------ILNDVKV---P 220 Query: 309 VEDM--------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 E++ KI + LD + ++ + +A+ A+ Y++ R G + Q + Sbjct: 221 KENLLGKEGDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICHQQI 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A + AA L + A+ + + S EAA A K + + ++ + Sbjct: 281 ISFKLADMATKLRAARLLIYSAADMKENHERYSMEAAMA-------KQYASDVCLEIVND 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GGSGY++ + R YR++ +I G+ Sbjct: 334 ALQIFGGSGYMKGMEVERAYRDAKICTIYEGT 365 >gi|159901273|ref|YP_001547520.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159894312|gb|ABX07392.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 386 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 16/269 (5%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP + + + ++E G+D+AAI ++ + D Y ++GHK W + +D +LA Sbjct: 114 APAIRGEMIAAVAISEPDAGSDVAAIRTRAVRDGDE-YVINGHKMWITNGTQADFITLLA 172 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 + G + L+ + G + K+GN S+ T L F + +GD Sbjct: 173 RTSDEPGYKSMSLLIVPTNTPGFHVSKKLEKLGNHSSDTALLAFDDVRVPVANRIGD--E 230 Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G V M+ L A+ +VS M + HY R R G LI+ ++ +A++ Sbjct: 231 GQGFVLQMQQFQKERLIGAVSAVSAMERIVEMTSHYCRERQTFGKPLIENQYIQFRLAEL 290 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +I A L++ ++E + A++ A ++A V ++ GG Sbjct: 291 LTEIEALRQLNYHCTRLLLAGHDITKEVSMAKLKA-------GRLAREVADTCLQFHGGM 343 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 GY+EE +AR++R++ SI G+ M+ Sbjct: 344 GYVEEYPMARYFRDARLLSIGGGADEIML 372 >gi|197104356|ref|YP_002129733.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196477776|gb|ACG77304.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 382 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 29/248 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE------GRVG 254 LTE G+D A+ ++ + D Y L+G K ++++ +D F ++A+ + V Sbjct: 124 LTEPEAGSDSGAVQTKAVRDGDD-YVLNGSKRYITNANRADLFTVMARTDPSKPGGSGVS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLV R L G+ + + K+G + ++ F N + N G E KI Sbjct: 183 AFLVERNLP-----GVTVGKPEKKMGQQGAHICDVNFDNV---RVPAENRLGGEGEGFKI 234 Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD + +S + V +AE ++ YA R G L + +++ IAD + A Sbjct: 235 AMQVLDRGRLHISAICVGVAERLIADSVAYAAERKQFGQALSNFQLVQGMIADCKTEALA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A AL A D +S + EAA A KY+ +M V A++ GG+GYI E Sbjct: 295 ARALVMETARKRDAGQSVTMEAAAA-------KYFASEMVGRVADRAVQIFGGAGYIAEY 347 Query: 429 SIARHYRE 436 I R YR+ Sbjct: 348 GIERFYRD 355 >gi|299144482|ref|ZP_07037561.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517570|gb|EFI41310.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 645 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + D Y L+G K F++ +P +D +++ A +G + Sbjct: 123 FGLTEPEAGSDAGGTETTAELDGD-YYILNGGKIFITNAPKADFYVVFAVTTPGIGTHGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G RS++T EL F+N + N+ + +I + Sbjct: 182 SAFIVEKGWEGFSFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKEGQGFRIAMQT 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ YA+ R G + Q ++ +AD+A + AA L Sbjct: 239 LDGGRIGIASQALGIAQGAYEAALKYAKERIQFGRPIAQQQIISFKLADMATKLRAARFL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A E K E MA K + +A ++ +A++ GG+GY++ + R Sbjct: 299 VYSAA----EMKHNHENYGMESAMA---KQYASDVALEIVNDALQIHGGNGYLKGMDVER 351 Query: 433 HYRESPANSILLGS 446 YR++ +I G+ Sbjct: 352 FYRDAKITTIYEGT 365 >gi|297616691|ref|YP_003701850.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144528|gb|ADI01285.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 382 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 18/262 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D+A ++++ QK+ D Y L+G K F+S+ ++ + + A ++ ++G + Sbjct: 124 LTEPGAGSDVAGLSTRCQKVGDE-YILNGTKQFISNGGVAGQYTVFATLDKKLGHKGICA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + D G+ + ++K+G RS+ T ++ F + + N+ + KI + LD Sbjct: 183 FMVDRDTPGISVGKKEDKLGIRSSNTTQVIFEDV---KVPAKNMLGKEGDGFKIAMKTLD 239 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + V+ M + +A+A + YA R G +I ++ +AD+A I A L Sbjct: 240 ISRACVAAMALGVAQAAFEVSVKYAMERQQFGKPIISFQAIQFMLADMAQLIEAGRLL-- 297 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + EA + ++ A + K +C +A V +A++ GG GY +E + +++ Sbjct: 298 -----YLEASCKQDQGLPYTDAASLAKCFCGDVAMKVATDAVQIYGGYGYTKEYPVEKYF 352 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R++ I G+ + + N Sbjct: 353 RDAKIMQIFEGTAQVQRIVIAN 374 >gi|296269787|ref|YP_003652419.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296092574|gb|ADG88526.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 381 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D AA+ ++ DG Y + G K W ++D + ++A+ EG G CF Sbjct: 127 LSEPHSGSDAAALRTRAAADEDG-YVIDGVKAWITHGGVADFYTLMARTSDEGARGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 VP +GL + + K+G RS+ T ++ F G L + E KI + Sbjct: 186 HVP-----AGVDGLSFGAPERKMGMRSSPTAQVRFD---GVRLRREALLGAEGEGFKIAM 237 Query: 316 IYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ V +A+A YA+ R G + D + +AD+A I+AA Sbjct: 238 AALDGGRLGIAACAVGVAQAAFEAASRYAKERRQFGSRIADFQGISFMLADMATQISAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + +AA A++ A M V +A++ GG GY+E+ + Sbjct: 298 ALYLEAARLRDAGRPYGTQAAMAKLFA-------TDMCMKVTTDAVQVFGGYGYVEDFPV 350 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 351 ERYMREAKVLQIVEGT 366 >gi|228997544|ref|ZP_04157157.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17] gi|229005167|ref|ZP_04162890.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228756142|gb|EEM05464.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228762172|gb|EEM11105.1| Butyryl-CoA dehydrogenase [Bacillus mycoides Rock3-17] Length = 381 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + DG Y +SG K W ++ ++ I+ A Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGVEENGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIILDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 333 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|222529223|ref|YP_002573105.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456070|gb|ACM60332.1| acyl-CoA dehydrogenase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 381 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 36/286 (12%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKEKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + +D +++ A + G PR ++E G C ++ ++K+G R+++T EL Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIIEKGYEGFYCGKK-EDKMGIRASSTTELI 212 Query: 291 FSNTFGFLLGDLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341 F + + N+ TG + MK D V+ M V +A+ AI YA+ Sbjct: 213 FEDC---KVPKENILGREGTGFIIAMKT---FDRTRPGVAAMAVGIAQGAYEHAIRYAKE 266 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPIT 400 R G L ++ +AD+ ++I AA +L + D AK S+E++ ++ A Sbjct: 267 RVQFGQPLSSFQAIQHMLADMYINIEAARSLLYSTCRMIDSGAKDFSKESSACKVFAS-- 324 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG+GY+++ + + R++ I G+ Sbjct: 325 -----DVAMKVTTDAVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|170719703|ref|YP_001747391.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169757706|gb|ACA71022.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 600 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 50/310 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ +A I ++ + DG Y + G+K F+S +S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLADIRTRAEPAGDGSYRIKGNKIFISGGDHELSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGSPNG---LCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS G + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYLVNQDGSCGGRNDVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G + + M +I + + + ++ +G SL YAR+R Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQR--P 324 Query: 346 GGILIDQ--------PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P++ ++A + A D+ A F + D +R Sbjct: 325 QGRLPDSKDPLSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTADGESAR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A ++ PI K W A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 QQAQALLDLLTPIVKSWPSTFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLN 456 LD+L Sbjct: 445 EGIQSLDLLG 454 >gi|297180173|gb|ADI16395.1| acyl-CoA dehydrogenases [uncultured bacterium HF130_12L15] Length = 596 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 36/291 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E + G+ ++ IT++ + DG Y L G K ++S + ++LA++ G Sbjct: 162 LSEPQAGSSLSDITTRAEPAGDGTYRLIGRKMWISGGDQEISENIVHLVLAKIPGGPAGV 221 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGD- 301 + F+VP+ +LE G NG+ L +K+G R L E S G+LLG+ Sbjct: 222 KGISLFIVPKHEVLEGGGIGERNGVTLAGLNHKMGYRGTTNTLLHLGEDSPCVGYLLGEP 281 Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------ILID 351 L+ + + +I + L + + +G + SLA A + R G +I+ Sbjct: 282 HKGLSYMFQMMNEARIGVGLGATALGAAGYQASLAYARERPQGRQPDGKDPSSAQVPIIE 341 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405 ++R + + + AL A+ D + ++E A ++ P+ K W Sbjct: 342 HADIRRLLLAQKAAVEGSLALGLYCADLVDTLRVETDETARRENELLLDLLTPVAKSWPS 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A++ +GG GY + + R YR++ N I G+ LD+L Sbjct: 402 EFCLEANKHAIQILGGYGYTRDFPLERIYRDNRLNPIHEGTHGIQGLDLLG 452 >gi|296284823|ref|ZP_06862821.1| acyl-CoA dehydrogenase family protein [Citromicrobium bathyomarinum JL354] Length = 580 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 84/352 (23%), Positives = 154/352 (43%), Gaps = 55/352 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQVE 250 + LTE + G+D+ A+ + Q I DG Y + G K +++ +++ I +LA++ Sbjct: 162 MNLTESQAGSDVGALRTTAQPIEDGEHAGKYRIKGQKIYITWGEHELAENIIHLVLARLP 221 Query: 251 GR------VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 G + FLVP+ L +DG+P N L L++K+G ++ T + + + G Sbjct: 222 GAPEGSRGISLFLVPKYHLKDDGTPGAHNDLRCVSLEHKLGINASPTCVMSYGDNDECIG 281 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348 L+G N + M +++A ++V V +AE A+ YA R S Sbjct: 282 ELVGAENRGLAAMFTM-----MNNARINVGSQGVQIAERATQQALAYALERVQSARAGAE 336 Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-AYARIMAPITK 401 ++D P ++R + + A L + A D A A A ++ P+ K Sbjct: 337 DRTPVAIMDHPDVRRMLLRMRSLTEAMRGLLYYTAGQVDRGDIGDAAAKARAEVLVPMLK 396 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---L 458 W V + ++ GG G++EE A+H+R++ I G+ D++ L Sbjct: 397 AWATDTGIEVASLGIQVHGGMGFVEETGAAQHFRDARIAPIYEGTNGIQAADLVTRKLGL 456 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510 E G + + LF+ + +D G + +L E +AR++ E +L Sbjct: 457 ENG-EVLQALFADIARDAGEEPQLQ--------ALAGECAAIARWMREDASL 499 >gi|301057558|ref|ZP_07198638.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300448282|gb|EFK11967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 384 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 33/273 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA----QVE 250 IG GLTE G+D A ++ + D + ++G K + +PM+ I+ A + Sbjct: 123 IGFGLTEPNAGSDAGATSTTATRDGDS-WIINGRKTLTTNADTPMTKGSIVQALTGTRPN 181 Query: 251 GRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G+V CF+V E+ +P G LK K+ R + T EL +N + D V P Sbjct: 182 GKVEYTCFIV----ENDTP-GFTRNTLKRKLMWRGSNTAELFLNNC---RVPDNAVLGNP 233 Query: 309 VEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + K +L LD +S+ M + A+ A+ Y++ R G + Q + +AD+ Sbjct: 234 GDGFKQMLATLDGGRLSIGAMGLGCAQGAYEAALRYSKERVQFGKPISRQQAISFKLADM 293 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AL I A L ++ + + +E+A A++ +C ++A V EA++ GG Sbjct: 294 ALKIELARNLLYKACWLAENKRPYGKESAMAKL-------YCSEIAREVADEAVQVHGGY 346 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G ++ + R YR+ + +G G + VL ++ Sbjct: 347 GLFKDYDVERFYRDQ--RLLQIGEGTSEVLRIV 377 >gi|218900467|ref|YP_002448878.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228905095|ref|ZP_04069127.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] gi|228968470|ref|ZP_04129458.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|218543147|gb|ACK95541.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228791176|gb|EEM38790.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|228854538|gb|EEM99164.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] Length = 379 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TNPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|330954906|gb|EGH55166.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae Cit 7] Length = 592 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAPAGTDLGMIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVADDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYARRRHVS------------GGILIDQ 352 + M L I + SG+R S A+ YA+ R S +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYAQDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++AA R ++ P++K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDAARKRADDLVALLTPVSKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI + R+ I G+ LD++ G+N F Sbjct: 405 IGLETTVHGQQVFGGHGYIRGWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAF 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|294339993|emb|CAZ88356.1| acyl-CoA dehydrogenase [Thiomonas sp. 3As] Length = 594 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 172/394 (43%), Gaps = 70/394 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ ++ AL+T T + + P++ S E+ T + LTE + G+ Sbjct: 124 LCPLLSDGAIEALLTAGTDAQKQRYIPRLISGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+A + S+ + DG Y L G K +++ M+D + L A V+G + F+ Sbjct: 171 DLALVRSRAEPQGDGTYRLFGQKIYITYGEHDMADNIVHLVLARLPDAPAGVKG-ISLFI 229 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 V ++LEDG N + +++K+G +++ T L + + G V TG + ++ Sbjct: 230 VLKVLEDGRRNDVWCASIEHKLGIKASPTAVLIYGD------GKGEVGTGAIGELVGEAN 283 Query: 313 ----KILIYLDSAIMSVSGMRVSLAE---------AIHYARRRHVSGGI-----LIDQPV 354 + I +++A +V +++AE A + R V G ++ P Sbjct: 284 RGLEYMFIMMNAARYAVGLQGIAVAERAYQKAAAYAKDRVQSRPVDGSAAQSVSIVHHPD 343 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKM 407 ++R + + AL+ A+ D ++ + EAAY + P+ K + +M Sbjct: 344 VRRMLMTMRALTEGCRALALVAASLHDVGRAHPDAGQRAAHEAAY-EFLVPLVKGYSTEM 402 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNL- 464 + V + ++ GG G+IEE A++YR++ +I G+ D++ + G L Sbjct: 403 SIEVASLGVQVHGGMGFIEETGAAQYYRDARILTIYEGTTAIQANDLVGRKTVRDGGALA 462 Query: 465 --FEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F S +E+ L ++G + + +E Sbjct: 463 LHFAARVSKVEEALTATGDAQAVAMAGQLRQARE 496 >gi|62465535|gb|AAX83264.1| short-chain acyl-CoA dehydrogenase [Equus caballus] Length = 332 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 78 LSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNSWEASATVVFASTDRSLQNKGISA 136 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP GL + ++K+G R+++T L F + + N+ P KI Sbjct: 137 FLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGFKIA 188 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + +A+A ++YA R G L ++ +AD+AL + +A Sbjct: 189 MQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALALESA 248 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R A D K ++EAA A++ A + A A+ +A++ +GG GY+ E Sbjct: 249 RLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVTEMP 301 Query: 430 IARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 302 AERHYRDARITEIYEGT 318 >gi|332305102|ref|YP_004432953.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172431|gb|AEE21685.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 586 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 51/332 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK+ S E+ T + LTE GTD+AA+ ++ D Y Sbjct: 146 SEHLQQSYLPKMLSGEWPGT-------------MNLTEPDAGTDLAAVKTKAVPNGD-HY 191 Query: 227 CLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPR--LLEDGSP----N 268 +SG K F++ M+D + L A V+G + F+VP+ L E+G P + Sbjct: 192 LISGQKIFITWGDHQMTDNIVHLVLARLPDAPAGVKG-ISLFIVPKFNLDENGEPGERND 250 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 C L++K+G + T + F + G +L+G+ + + M + + Sbjct: 251 AYCV-SLEHKLGIHGSPTCVMSFGDNGGAKGYLVGEAHKGLSYMFTMMNHARQGVGLQGL 309 Query: 326 SGMRVSLAEAIHYARRR------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S A+ YA+ R S ++ P ++R + + A AL A Sbjct: 310 AISEGSYQHALAYAKERLQGTNKDGSRFTIMKFPDVRRMLMQMKSSTEAMRALCLVAAAE 369 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D S A + + PI K WC +++ + + GG G++EE A+ YR++ Sbjct: 370 IDRGNS-----ARSELFTPIVKGWCTELSQELTYLGTQIHGGMGFVEETGSAQFYRDARI 424 Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNLFEQL 468 +I G+ LD++ L+ +G +L E L Sbjct: 425 LTIYEGTTGVQALDLVGRKTLVNQGESLGELL 456 >gi|326387565|ref|ZP_08209171.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207611|gb|EGD58422.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 596 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/345 (21%), Positives = 151/345 (43%), Gaps = 57/345 (16%) Query: 152 MSPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T+ ++ A+ + + + + PK+ E+ T + LTE GT Sbjct: 125 LYPGLTNGAIAAIDAYASDTLKETYLPKMVGGEWSGT-------------MCLTEPHCGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFL 257 D+ + ++ + DG Y +SG K F+S+ D ++LA+ V+G + FL Sbjct: 172 DLGLLRTRAEPAGDGSYKVSGAKIFISAGEQDLTDNIVHLVLARLPDAPRGVKG-ISLFL 230 Query: 258 VPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L D + NG +++K+G +++AT ++ F G+L+G+ + +E M Sbjct: 231 VPKFLPDAAGAWSVRNGAHCTMIEHKMGIKASATCQMLFEEATGWLVGEPHRG---LEAM 287 Query: 313 KILIYLDSAIMSVSGMRVSLA---EAIHYARRR----HVSGGILIDQPV--------MKR 357 ++ + + + G+ + A A+ YA+ R +SG D+P ++R Sbjct: 288 FTMMNAERVGVGIQGLGIGEAAYQSAVWYAKERVQGRSLSGTKHPDKPADPIIVHPDVRR 347 Query: 358 AIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAV 411 + I ++ ++ + D K R A +M P+ K + Sbjct: 348 MLLTIRAWNEGCRGIAGWISRALDAEKHGETPEVRQRAADLVALMTPVVKALFTDLGLES 407 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A++C GG G+I E + ++ R++ + G+ LD++ Sbjct: 408 ASLAVQCYGGHGFIRESGVEQYMRDARIAMLYEGTNGIQALDLVG 452 >gi|253682754|ref|ZP_04863549.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] gi|253560953|gb|EES90407.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] Length = 379 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 25/284 (8%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W + F E + P T V +G GLTE GTD A + D Y L+G+K Sbjct: 96 WPIETFGTEEQKSKYLPDLATGVKLGAFGLTEPNAGTDAAGQLTVAVDKGD-YYLLNGNK 154 Query: 233 WFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+++ ++D +++ A + +G + + + G + + K+G ++T EL F Sbjct: 155 IFITNGEVADVYVVFAMTDKALGNRGISAFIVEKGMEGFSFGSHEKKMGIHGSSTCELIF 214 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 + LLG++N + KI ++ LD + V+ + +AE A +V Sbjct: 215 KDVKLPKENLLGEIN------KGFKIAMMTLDGGRIGVAAQALGIAEGALDATVEYVKTR 268 Query: 348 ILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 ++P+ + +A++ I AA L + A + D ++ +E+AA A++ A T Sbjct: 269 EQFNRPLSAFQNTRFTLAEMKTRIEAARYLVYSAAQAKDNGEAYAEKAAMAKLFASET-- 326 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY + + R R++ I G+ Sbjct: 327 -----ARDVTCKAVQLFGGYGYTRDYPVERMMRDAKITEIYEGT 365 >gi|229085424|ref|ZP_04217665.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44] gi|228697900|gb|EEL50644.1| Butyryl-CoA dehydrogenase [Bacillus cereus Rock3-44] Length = 371 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + DG Y +SG K W ++ ++ I+ A Sbjct: 103 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAFLDGDEYVISGEKCWITNAEYANTIIVTA 160 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP + GL +K+G R++ T E+ + + Sbjct: 161 INGVEENGKKRISAFIVPT-----NSEGLTISSPYDKMGVRASNTCEIVLDSVRVPKENI 215 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 216 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKTISNF 269 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 270 QAIQFKLADMATEVELARNLVHKAAWLKDHDKPFGKEAAMAKLFA-------SEAASRIA 322 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 323 NQAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 359 >gi|167768666|ref|ZP_02440719.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1] gi|317498911|ref|ZP_07957195.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167710190|gb|EDS20769.1| hypothetical protein CLOSS21_03225 [Clostridium sp. SS2/1] gi|291559747|emb|CBL38547.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2] gi|316893836|gb|EFV16034.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 380 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 44/267 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253 GLTE G+D + +K D Y L+G K F + P++D A L + E + + Sbjct: 124 FGLTEPNAGSDAGGCVTVAEKDGDD-YILNGLKCFNTNGPLADYTAVYALTEPEKKAKGL 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF+V + G+P G ++++K+G RS E+ +L ++ V P E+M Sbjct: 183 SCFVVKK----GTP-GFSVGKIEDKMGIRSAQVSEM--------ILENVRV---PKENMI 226 Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + + LD + V+ + +AE A Y + R G L + + Sbjct: 227 VESGQGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++I AA + ++ A E + S AA A KY C + A V EA++ + Sbjct: 287 AELEMEIEAAKLMLYKAATDKQEGRPYSLPAAKA-------KYLCTEAAMHVTTEAVQML 339 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY++E + R R++ I G+ Sbjct: 340 GGNGYMKEYHVERMMRDAKITQIYEGT 366 >gi|319787394|ref|YP_004146869.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] gi|317465906|gb|ADV27638.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 382 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D + + + + DG Y ++G K W S P++ I+ A G + Sbjct: 123 FALTEPQSGSDASNMRCRAVRQDDGSYVINGKKSWITSGPVARYIILFAVTNPEQGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D S G + + K+G R++AT E+EF++ ++ V + KI + Sbjct: 183 TAFMIDTSREGFHRGKTEPKLGIRASATCEIEFAD---YVARPEEVVGVEGQGFKIAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + +A A I Y R R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAIGIARAAYEKTIEYVRERKAFGSPIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + K S EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGKPFSAEAAIAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|186683598|ref|YP_001866794.1| acyl-CoA dehydrogenase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186466050|gb|ACC81851.1| acyl-CoA dehydrogenase domain protein [Nostoc punctiforme PCC 73102] Length = 394 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 38/283 (13%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 DW PK+ S E + L+E G+D ++ + +S Y L+GHK Sbjct: 108 DWLPKLASGE-------------IIAAFALSEPNVGSDAKSVETTA-TLSGDAYILNGHK 153 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W ++D F++ AQ EG+ FLV E SP GL + + +G R++ EL Sbjct: 154 KWITYGQIADVFLVFAQCEGKPSAFLV----EKNSP-GLSIKPIFGMLGVRASMLAELHL 208 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH 343 ++ L+G L V LD SV+ V +A+A I Y R Sbjct: 209 NDCRIPQENLVGRLGFGFSYVASSA----LDYGRYSVAWGSVGIAQACLSACIRYTSDRK 264 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G L + ++++ I ++ +I AA L ++ A E S + I I KY+ Sbjct: 265 QFGVYLKEHQLIRQMITNMIANIKAARLLCYQ-AGYLKEIGDPS-----SIIETSIAKYF 318 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V ++A++ GG+G E + R+ R++ I+ GS Sbjct: 319 TSTIASQVASDAVQIHGGNGCSSEYPVERYLRDAKIMEIIEGS 361 >gi|171463650|ref|YP_001797763.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193188|gb|ACB44149.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 595 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 53/342 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +D Y ++G K F+SS D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTKAELQADDTYAITGTKIFISSGDHDLAENIVHLVLARLPDSPIGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F VP+ DGS N + L++K+G NAT + F G L+G+ + Sbjct: 226 KGISLFAVPKFQVGADGSVGKSNAVSCGSLEHKMGIHGNATCVMNFDGAIGTLVGEPHKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + M L + S+ V+ + YA+ R + +I P Sbjct: 286 LNAIFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKERLQMRSLTGAKAPEKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCK 406 ++R + A A S+ +A N DE R E ++ PI K + Sbjct: 346 DVRRMLLTQRAYAEAGRAFSYWVALMIDTELNHPDEG-VRKETGEMVTLLTPIIKAFLTD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 A E M+ GG GYI E + ++ R++ N I G+ LD+L Sbjct: 405 NAFVATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLG---------- 454 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKI 508 + LG GKK +T I +D+G+ + + E I Sbjct: 455 ------RKVLGDMGKK-LTKFGKIIEKFIDDEGVRKEMQEFI 489 >gi|317130792|ref|YP_004097074.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cellulosilyticus DSM 2522] gi|315475740|gb|ADU32343.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cellulosilyticus DSM 2522] Length = 383 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D A I ++ K D Y L+G K F+++ ++D +I+ A+ +G V Sbjct: 123 FALTEPSAGSDAANIKTRAVKKGDQ-YILNGEKVFITNAGVADTYIVFAKTNPNLGSKGV 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306 + + + GL + K+G + T+ + F + GF + N++ Sbjct: 182 TAFIVEKNTPGLFIGTKEKKMGLHGSNTMPIHFDDAIVPAENRLGEEGEGFKIALANLNV 241 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G + A ++ +L +A +YA+ R G + Q + +AD+A + Sbjct: 242 GRI---------GIAAQALGIAEAALEQATNYAKERKQFGKTIGSQQAIALKLADMATKV 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++R A + K +E + ++K + +A EA++ GG GY E Sbjct: 293 EAAKLLTYRAAYLHEHRKPCEKEVS-------MSKSYASTIAMEAATEAIQVFGGYGYTE 345 Query: 427 ERSIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 346 AYPVERFFRDAKVTQIYEGT 365 >gi|303312981|ref|XP_003066502.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106164|gb|EER24357.1| glutaryl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036633|gb|EFW18572.1| glutaryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira] Length = 429 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y L+G K W +SP+SD F++ A++E G++ Sbjct: 165 FGLTEPNHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIK 224 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R + P L +KNK R++ T ++ N +L D+ GP Sbjct: 225 GFIVQR--DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP--- 279 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 280 ---FTCLNSARLGIAFGTMGALEDCIDRARTYSIERKQFKGNPLAKYQLIQKKLADAATD 336 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A DE K E M +TK C A E GG+ Sbjct: 337 AAYGTLAAVQVARLKDEGKCTPE-------MISMTKRQNCDRALVGARTLQEVFGGNAAS 389 Query: 426 EERSIARH 433 +E I RH Sbjct: 390 DEYHIGRH 397 >gi|149924253|ref|ZP_01912626.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1] gi|149814878|gb|EDM74443.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1] Length = 383 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 58/292 (19%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234 PK+ S EY V G L+E G+D A+T++ +K G + L G K W Sbjct: 111 PKLCSGEY------------VVGGFALSETGAGSDPGAMTTKARKTDKG-WVLDGSKLWI 157 Query: 235 LSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 S + F++ A+ G CFLVP G G+ + + K+G R + T L Sbjct: 158 TSGTDAGLFVVWARTSDAPGTKGISCFLVP-----GDAPGVTRGKAEEKMGQRGSPTTAL 212 Query: 290 EFSNT-FG--FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE------------ 334 EF G LLG+L P+ A+M++ G R+ +A Sbjct: 213 EFEGVELGEEALLGELERGF-PI-----------AMMALDGGRIGIASLALGVGLAASEF 260 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 A YA R G + ++ +AD +++AA L+ R A+ D + + EA+ A+ Sbjct: 261 ANKYASERKQFGRPINSFQALQWYMADSHTELSAARLLTLRAASLKDAKQPFTREASMAK 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + + C A++ +GG GY ++ + R+ R+ I G+ Sbjct: 321 LYSSEKAFQACN-------RALQMLGGYGYTQDFPVERYLRDVRVTMIYEGT 365 >gi|121592565|ref|YP_984461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120604645|gb|ABM40385.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 385 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W PK+ + E V LTE G+D A++ + K D Y Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAIKDGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K +++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 IVNGTKRYITNAPHAGMFTLMARTNPADKGAGGVSSFIV-----DAKTPGISFGKYDKKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ + + V+ R+ L Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LQEGRGFKTAMKVLEKGRIHIAAVAVGVA-QRI-L 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + D +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 RDALAYALERKQFGQPICDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GG+GY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356 >gi|152986136|ref|YP_001346285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961294|gb|ABR83319.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 593 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGMIRTRAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNPVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILIDQ--------P 353 + M L I + +S A+ YAR R S G + D+ P Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQGAVAYARERLQSRAPTGPVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S + D AK RS+ A ++ P+ K + Sbjct: 346 DVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + GG GYI E + R+ I G+ LD++ ++ G LF Sbjct: 406 GLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANG-GLF 464 Query: 466 EQLFS 470 +FS Sbjct: 465 LSIFS 469 >gi|153005024|ref|YP_001379349.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028597|gb|ABS26365.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 389 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 24/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + GLTE G+D A + + + D + L+G K F++ + D F++LA Sbjct: 123 PLARGEKLAAWGLTEPGSGSDAAGLRTTAVRRGD-RWLLNGAKTFITQGTVGDTFVVLAN 181 Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNV 304 E R + +LE G+ G + + K+G RS+ T EL E LG++N Sbjct: 182 TEPERKQHGITAFVLEKGA-KGFSQRPIHGKLGMRSSDTAELHLDEVEVPDAQRLGEVN- 239 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 G V ++IL D +++ + V LA E+ YA+ R G + + + + Sbjct: 240 -QGFVNTLQIL---DRGRITIGALAVGLARGALEESRAYAKERRTFGRPIAEHQAVAFML 295 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A ++AAA L R A D + EA+ A++ A + A +A++ Sbjct: 296 ADVATEVAAARLLVHRAAALCDAGEPFGAEASMAKLFA-------SEAAMRATTKAVQIH 348 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY + + R++R++ I G+ Sbjct: 349 GGYGYTRDFPVERYFRDAKLTEIGEGT 375 >gi|237713780|ref|ZP_04544261.1| acyl-CoA dehydrogenase [Bacteroides sp. D1] gi|262409314|ref|ZP_06085857.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644960|ref|ZP_06722694.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294805964|ref|ZP_06764831.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229446227|gb|EEO52018.1| acyl-CoA dehydrogenase [Bacteroides sp. D1] gi|262352766|gb|EEZ01863.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639681|gb|EFF57965.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446846|gb|EFG15446.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 568 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 36/343 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + DG + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKGKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468 + ++ GGSG++ E + R YR++ SI G+ + + + G+ + FE + Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYIATIREFETI 466 Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 + E + L S KK+ S + KE D+ L F K+ Sbjct: 467 PCSPEMEPLMSRLKKMADKFEASTNAVKEVQDQELLDFTARKL 509 >gi|15600213|ref|NP_253707.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107104120|ref|ZP_01368038.1| hypothetical protein PaerPA_01005193 [Pseudomonas aeruginosa PACS2] gi|218894119|ref|YP_002442988.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254238271|ref|ZP_04931594.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719] gi|254244096|ref|ZP_04937418.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192] gi|9951307|gb|AAG08405.1|AE004914_6 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126170202|gb|EAZ55713.1| hypothetical protein PACG_04399 [Pseudomonas aeruginosa C3719] gi|126197474|gb|EAZ61537.1| hypothetical protein PA2G_04932 [Pseudomonas aeruginosa 2192] gi|218774347|emb|CAW30164.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 600 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 46/308 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + +DG Y + G+K F+S P+S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGSYRIKGNKIFISGGDHPLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L + G N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 + G+L+G L + + +I + + + ++ +G SL YAR R Sbjct: 271 DNGACVGYLVGKPHHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARERPQG 326 Query: 343 HVSGGILIDQP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + G P + ++A + A D+ A F + + ++ + R + Sbjct: 327 RLPDGKDPSAPQVAIIRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQ 386 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 387 AHDLLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHG 446 Query: 449 AMVLDVLN 456 LD+L Sbjct: 447 IQSLDLLG 454 >gi|71282231|ref|YP_267920.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] gi|71147971|gb|AAZ28444.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] Length = 598 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + DG Y L+G K F+S+ D I++A++ G Sbjct: 164 LTEPHCGTDLGMLRTKAELNDDGSYSLTGTKIFISAGEHDLSDNIVHIVIARIPGSPEGS 223 Query: 253 --VGCFLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ E N + +++K+G +NAT + F G+L+G++N Sbjct: 224 KGISLFIVPKFNVTNEGETSDRNAVNCGSIEHKMGINANATCVINFDGAKGYLIGEVNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + L A V+ S A+ YA+ R +SG +I P Sbjct: 284 LNCMFTFMNVARLGVATEGVAAAEASFQGALAYAKDRLQMRSLSGVKNPDGPADAIIVHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++R + AL LA D A + EE A A ++ PI K + ++ Sbjct: 344 DVRRMLLTQKSIAEGGRALIAYLAQLVDIGHASTCEEEKATAEAKLALLTPIAKAFLTEL 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ GG G+I+E + + R++ + + G+ LD+L Sbjct: 404 GLECTSHGVQVFGGHGFIKEWGMEQLMRDTKISCLYEGTTGIQALDLL 451 >gi|226305373|ref|YP_002765331.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226184488|dbj|BAH32592.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 380 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E + G+D AA++ + +DG Y ++G K W + +D + + A+ +G G C Sbjct: 127 LSEAQAGSDAAALSCKA-TATDGGYRINGSKAWITNGGKADFYNLFARTSDDGSRGISCL 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LV D GL + + + K+G R+ T + + F + D + + + I Sbjct: 186 LV-----DKDTEGLSFGKPEEKMGLRAVPTASANYDDAF---VPDERLIGQRGQGLPIAF 237 Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + V +A+ A+ YA+ R G +ID + +AD+A + +A Sbjct: 238 SALDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A D A+ R Y+R A + K A V +A++ GG GY ++ + Sbjct: 298 ------ATYLDAARRRDAGVPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPV 350 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 351 ERYMREAKITQIFEGT 366 >gi|225717626|gb|ACO14659.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Caligus clemensi] Length = 411 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 44/266 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 LTE G+D A ++ + DG Y L+G K W ++P + + ++ A + + Sbjct: 151 LTEPGNGSDAGAASTMAKISKDGSYFILNGTKAWITNAPEAKSMVVFATTDSSLKHKGIT 210 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F+VP+ L G+ + ++K+G R ++T + +L D+ V P E + Sbjct: 211 AFIVPKDLP-----GVGLGKKEDKLGIRGSSTSNV--------ILEDVEV---PKEYVLG 254 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 K+ + A+ ++ G R+ +A A+ YA +RH G + +++ IA Sbjct: 255 KLGMGFKIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRHSFGTAIAKLQMVQSKIA 314 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D++ + A+ L +R A + D ++EAA +++ A T W V ++++ +G Sbjct: 315 DMSTRVEASRLLLYRAAAAKDAGMPFTKEAAMSKLFASETATW-------VAHQSIQVLG 367 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G G++ + R+YR++ I G+ Sbjct: 368 GMGFVTDMPSERNYRDARITEIYEGT 393 >gi|297195300|ref|ZP_06912698.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197719618|gb|EDY63526.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 383 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 57/308 (18%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA T +DW P++ S E A+G GLTE G+D + ++ Sbjct: 95 AKTVAAHGTEEQKRDWLPRLTSGE--------------ALGCFGLTEPGTGSDAGNLITR 140 Query: 218 GQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270 ++DG Y ++G K F+++ +D ++ A+ G FLVP GL Sbjct: 141 --AVADGGDYVINGSKMFITNGTWADVVLLFARTNDTPGHKGVSAFLVPT-----DTPGL 193 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIM 323 + + K+G R AT EL +L D+ V GP E I + + M Sbjct: 194 TRRTVHGKLGLRGQATAEL--------VLEDVRVPAAAMLGP-EGKGFSIAMSALAKGRM 244 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 SV+ V +A+A + YA+ R G + +++ ++D+A+D+ AA L++R+A+ Sbjct: 245 SVAAGCVGIAQAALDAAVGYAKEREQFGRSIAHYQLVQELLSDVAVDVDAARLLTWRVAD 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D + + A+ A++ A + A A++ GG GYI+E + + R++ Sbjct: 305 LIDRGQQFATAASQAKLFA-------SEAAVRSANNALQVFGGYGYIDEYPVGKLVRDAR 357 Query: 439 ANSILLGS 446 ++ G+ Sbjct: 358 VMTLYEGT 365 >gi|219363163|ref|NP_001136884.1| hypothetical protein LOC100217040 [Zea mays] gi|194697474|gb|ACF82821.1| unknown [Zea mays] Length = 390 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 31/291 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + PK+ S E+ IG L ++E G+D+ ++ + +K+ DG Sbjct: 112 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 156 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P + ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 157 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 215 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ + M+ L + Y R Sbjct: 216 SDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 275 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 276 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 332 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A V +A++C+GG+GYI E R R+ A +G+G + V Sbjct: 333 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 377 >gi|332992797|gb|AEF02852.1| Acyl-CoA dehydrogenase [Alteromonas sp. SN2] Length = 599 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 166/408 (40%), Gaps = 65/408 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ M + T + + PK+ S E+ T + LTE G+ Sbjct: 125 MYPGLSQGCMETIKAHGTETLQNQYLPKLISGEWTGT-------------MCLTEAHCGS 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + + + DG Y L+G K F+S+ D I+LA++ G + F+V Sbjct: 172 DLGMLKCRAEPQDDGSYSLTGTKIFISAGEHDMSENIVHIVLARLPGAPEGTKGISLFVV 231 Query: 259 PR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + ++G NG+ +++K+G +++AT + F GFL+G N + Sbjct: 232 PKFNVSDEGEKLDRNGVACGSIEHKMGIKASATCVINFDGAKGFLIGQPNRGLNCMFTFM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP--------------VM 355 + + + ++ S A+ YA+ R ++G D P + Sbjct: 292 NTARIGTGLEGLAASEASFQGALRYAKDRIQFRSLTGRKNQDGPADPIIVHPDVRRMLLT 351 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 ++A A+ +AA + D+A+ ++ + PI K + + A + Sbjct: 352 QKAFAEGNRALAAYCMQLVDVTLYGDDAQEKTLADTKLAFLTPIVKAFLTETAQESTSYG 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 M+ GG G+I+E + + R++ ++ G+ +D+L + Sbjct: 412 MQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLG----------------RKV 455 Query: 476 LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMN 523 +GS+G+ + +++ C+ +G A+F AL S + MN Sbjct: 456 MGSNGELLNVFVQEVREYCESLRGKAQFSAWTNALTSHLDEWQQLTMN 503 >gi|229584191|ref|YP_002842692.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] gi|228019240|gb|ACP54647.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] Length = 371 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGIYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A ++ + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|187926711|ref|YP_001893056.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|241665043|ref|YP_002983402.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] gi|187728465|gb|ACD29629.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|240867070|gb|ACS64730.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 385 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 37/277 (13%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 D+ P+I S E + I LTE G+D A++ ++ D Y ++G K Sbjct: 108 DYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATLDGDH-YVINGTK 153 Query: 233 WFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +++ +P + AF ++A+ G + F+VP G+ + K+G R T Sbjct: 154 RYITNAPRAGAFTLMARTGGEGASGISAFIVP-----ADTPGITLGKPDKKMGQRGTKTC 208 Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339 ++ N ++G + G MK+L D + +S + +A +A+ YA Sbjct: 209 DVMLDNVRVPAANIIGGV-AGQGFKTAMKVL---DRGRLHISALACGMAHRLITDAVAYA 264 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G + D +++ +AD ++ A ++ A +D AK ++ ++A Sbjct: 265 KERKQFGQPIADFQLIQAMLADSQAELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASC 323 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 TK +C +M V A++ GG+GYI E R YR+ Sbjct: 324 TKMFCTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360 >gi|330956958|gb|EGH57218.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 592 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + D Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGMIRTRAEPQPDDTYRITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F + G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSVGERNTVSCGSIEHKMGIQASATCVMNFDDAVGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ--------P 353 + M L I ++ S AI YA + R +G D+ P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVQSYQNAIEYALDRIQSRAPTGAQNTDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK ++ A R ++ P+ K + + Sbjct: 346 DVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSDDDTARKRADDLVALLTPVAKAFLSDI 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LFE 466 + GG GYI E + R+ I G+ LD++ G+N F Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAFY 465 Query: 467 QLFS 470 QLFS Sbjct: 466 QLFS 469 >gi|330812184|ref|YP_004356646.1| dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380292|gb|AEA71642.1| putative dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 592 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + + G+ N +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S AI YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK + R ++ P+ K + + Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPVTRKRAEDLVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466 + GG GYI E + R+ I G+ LD++ G+ F Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465 Query: 467 QLFS 470 +LF+ Sbjct: 466 KLFA 469 >gi|251779321|ref|ZP_04822241.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083636|gb|EES49526.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 379 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + +K D Y L+G K F+++ P+S+ F++ A + G + Sbjct: 123 FGLTEPNAGSDAGGCITTAEKKGD-YYILNGSKCFITNGPLSETFLVFALTDKSKGSKGL 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G +++NK G +S EL F N + N+ + I + Sbjct: 182 SAFIVEKEFEGFSIGKIENKCGIKSAQVSELIFENC---KVPAENLVGAEGKGFGIAMKA 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +AE A Y + R G L + +A++ L+I A + Sbjct: 239 LDGGRIGVAAQGLGIAEGAFDIAKQYLKDRQQFGKPLWKNQYLAFKMAELELEIEKAKYI 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A E + S AA A++ C +A V E+++ +GG+GY++E ++ R Sbjct: 299 LYKAAMDKQEGRPYSVSAAKAKLS-------CTDVAMKVTVESVQMLGGNGYMKEYNVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKITQIYEGT 365 >gi|283798801|ref|ZP_06347954.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1] gi|291073488|gb|EFE10852.1| butyryl-CoA dehydrogenase [Clostridium sp. M62/1] gi|295092704|emb|CBK78811.1| Acyl-CoA dehydrogenases [Clostridium cf. saccharolyticum K10] gi|295114947|emb|CBL35794.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SM4/1] Length = 384 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 39/277 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD A Q + + DG + L+G K F+++ +D ++++A Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKIFITNGKEADIYVIIA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NT 294 GR + ++E G+P G + + K+G R +AT EL F+ N Sbjct: 171 VTGTKEDARGRKKKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDCRIPKENL 229 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGIL 349 G N++ + LD + ++ + LAE I Y + R G L Sbjct: 230 LGQQGKGFNIA---------MHTLDGGRIGIAAQALGLAEGALERTIEYVKERKQFGRAL 280 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + +AD+A + AA L +R A + K+ S EAA A++ + ++A Sbjct: 281 GQFQNTQFQLADMATKVKAAQLLVYRAAMAKATQKTYSVEAAMAKL-------YAAEVAM 333 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V +A++ GG GYI E + R R++ I G+ Sbjct: 334 EVTTKAVQLHGGYGYIREYDVERMMRDAKITEIYEGT 370 >gi|146305598|ref|YP_001186063.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145573799|gb|ABP83331.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 622 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 38/293 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ------ 248 + LTE G+ ++ I ++ + +DG Y + G+K F+S P+S+ + +LA+ Sbjct: 183 MALTEPHAGSSLSDIRTKAEPHADGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPP 242 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + FLVP+ +DGS N + L +K+G R + L F + G+L+ Sbjct: 243 GVKG-ISLFLVPKFHVNDDGSLGARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 301 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------I 348 G L+ + + +I + + + ++ +G SL A + + R G Sbjct: 302 GKPHAGLSYMFQMMNEARIGVGMGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPTSPQIS 361 Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +++ ++R A + A D+ A F + + A+ R+ ++ PI K Sbjct: 362 IVEHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTQTLETAEDRTRALELLDLLTPIVKS 421 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 422 WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLL 474 >gi|297819030|ref|XP_002877398.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp. lyrata] gi|297323236|gb|EFH53657.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis lyrata subsp. lyrata] Length = 409 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K+ DG Y L+G+K W + P ++ ++ A+ + + G + Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F N F + + N+ + + +L+ Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENIIDKEGKGVYVLMSG 266 Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ ++S M+ L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 267 LDLERLVLSAGPLGIMQACLDTVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A D K ++ A + A + A V +A++C+GG+GYI E + R Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 380 LLRDAKLYEIGAGT 393 >gi|167769780|ref|ZP_02441833.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM 17241] gi|167668141|gb|EDS12271.1| hypothetical protein ANACOL_01114 [Anaerotruncus colihominis DSM 17241] Length = 664 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE+ G+D A T + Y L+G K F++ +P SD +++ A +G + Sbjct: 151 FGLTEQNAGSD-AGGTETTAVLKGDYYLLNGSKIFITNAPKSDIYVVFAVTTPDIGTRGI 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + +K+G RS++T EL F++ + N+ E KI + Sbjct: 210 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMAT 266 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ YA+ R G + Q + IAD+A + A L Sbjct: 267 LDGGRIGIAAQALGIAQGAFEHAVEYAKERIQFGKPIAFQQALSFKIADMATKLRCARML 326 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A + E+A A++ + +A V +A++ GGSGY++ + R Sbjct: 327 IYSSAELKEHHVPYGMESAMAKM-------YASDIALEVTNDALQIFGGSGYLKGMEVER 379 Query: 433 HYRESPANSILLGS 446 YR++ +I G+ Sbjct: 380 AYRDAKITTIYEGT 393 >gi|11498279|ref|NP_069505.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304] gi|2649946|gb|AAB90570.1| acyl-CoA dehydrogenase (acd-4) [Archaeoglobus fulgidus DSM 4304] Length = 414 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 35/319 (10%) Query: 147 EAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 E G L + S +MV+++ R ++W + F + P+ K GLTE Sbjct: 79 EVGVLGNGIGCSYAMVSIVGEAIYRFGQEWQKEEFLK--------PIIKGKKVSAEGLTE 130 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE------GRVGCFL 257 RGG+D T++ +K + ++ L+G K F++ ++D +++ A+ + + FL Sbjct: 131 PRGGSDFFGTTTRAEKKGN-VWVLNGAKRFIAGGKVADFYLIYARTDPTAPGHKALTAFL 189 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 V R + G+ + L N +G R T + F + + LG++N + M I Sbjct: 190 VERDM------GVEVEELYNLLGFRGMGTARIVFKDVEVPDEYRLGEVNGARVIFNRMMI 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + SA ++ R +L A+ Y+ +R G + + + +A+ + AA AL++ Sbjct: 244 PERMTSAAGALGTARAALEVAVKYSNKRKAFGRKIREFQGVNFMVAEAVTKLDAARALTY 303 Query: 375 ---RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 R + +D K R + KY+ + V+ +AM+ +GG GY + + Sbjct: 304 NAARAVDLYDAGKGPD-----PRRLVSEAKYFATDVGWDVVNKAMQILGGIGYTQVYPVE 358 Query: 432 RHYRESPANSILLGSGNAM 450 R R+ I GS M Sbjct: 359 RMLRDMRLAPIWTGSNEIM 377 >gi|304312977|ref|YP_003812575.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium HdN1] gi|301798710|emb|CBL46943.1| Long chain acyl-CoA dehydrogenase (LCAD) [gamma proteobacterium HdN1] Length = 382 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 15/258 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A + ++ + D Y ++G K F++S + +A G G + Sbjct: 127 LAITEPSGGSDVARLKTRAVREGD-YYRVTGSKTFITSGYYADYYTVAVRTGSEGYGGIS 185 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL + G R K+G ++ T EL F + L+G N+ + + Sbjct: 186 LLLIEKGTLGFSVGRKLKKMGWWASDTAELFFDDCKVPVANLIGAENMGFYAIMSNFQME 245 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L+ A+M+ +++L E++ Y R G L V++ +A++A + A ++R+ Sbjct: 246 RLNLAVMAYMTAQLALEESLRYVHEREAFGKPLAKFQVLRHKLAEMATKVEVAKEYTWRI 305 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A S +E + A K + ++ V EA++ GG G++ E + R YR+ Sbjct: 306 AARIQAGDSVVKEISMA-------KNFATSVSDYVTYEAVQIFGGMGFMRETLVERLYRD 358 Query: 437 SPANSIL-LGSGNAMVLD 453 N IL +G G A +++ Sbjct: 359 ---NRILAIGGGTAEIMN 373 >gi|299768808|ref|YP_003730834.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298698896|gb|ADI89461.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 600 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I S+ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFHVNADGTVGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKDADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRISCLYEGTTEIQALDLL 453 >gi|170694994|ref|ZP_02886143.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170140092|gb|EDT08271.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 600 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 40/310 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D++ + ++ + G Y ++G K F+S D ++LA++ Sbjct: 165 LTEPDSGSDLSRLRTRAEPDEQGSYRITGTKIFISGGDHDLTENIVHLVLARLPDAPPGT 224 Query: 253 --VGCFLVPRLLEDG--------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + F+VP+L+ D S N + +++K+G R++AT L F G+++G Sbjct: 225 RGISLFVVPKLIPDSATGEVAPDSDNLVSTGAIEHKMGIRASATAVLNFEGARGWMIGQP 284 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH------------VSGGILI 350 N + M + A+ SV +S A+ YA+ R + +I Sbjct: 285 NGGLRAMFTMMNSSRIGVAVQSVGVSEISYQNALAYAKERRQGKAPGHCGEQRATPDAII 344 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI--MAPITKYWC 404 D P ++RA+ + + + AL A D + S EAA +R+ + P+ K + Sbjct: 345 DHPDVRRALLTMKVLVEGIRALYVESAMLLDVRASQPDSTEGEAAESRLALLTPVLKSFI 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKG 461 A + ++ GG GY+ E + +R++ + G+ LD++ LE G Sbjct: 405 SDCAVQITDLGVQIHGGYGYVHETGMEHLFRDARIVPLYEGTNGIQALDLVTRKIGLEDG 464 Query: 462 TNLFEQLFST 471 L L ST Sbjct: 465 RVLDAWLAST 474 >gi|121609052|ref|YP_996859.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553692|gb|ABM57841.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 605 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 51/294 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + ++ + +DG Y L G K F++ D ++LA+V G Sbjct: 161 MNLTEPQAGSDLALVRTRAEPQADGSYKLFGTKIFITYGEHDMAENIVHLVLARVPGAPE 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+ P+ L +DGS N + +++K+G +++ T L+F G + GD Sbjct: 221 GVKGLSLFVCPKFLVRQDGSLGARNDVHCVSIEHKLGIKASPTAVLQFGAGPG-VAGD-- 277 Query: 304 VSTGP-------------VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGG 347 STGP +E M I++ + + G+ +S +A+ YAR R S Sbjct: 278 -STGPGAVSHLVGQENRGLEYMFIMMNAARYAVGMQGIAISERAYQKAVQYARERVQSRP 336 Query: 348 I---------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAY 392 + +I P ++R + + I AL+ A +FD +A+ R A Sbjct: 337 VDGSGNASIAIIGHPDVQRMLMTMRAGIEGCRALATVAAAAFDTAQHHPDAQIRQHNRAC 396 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K +C + + + A++ GG G+IEE A++YR++ +I G+ Sbjct: 397 YEFMVPLVKGYCTETSLELTCLALQVHGGMGFIEETGAAQYYRDARILTIYEGT 450 >gi|227827022|ref|YP_002828801.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.14.25] gi|227458817|gb|ACP37503.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.14.25] Length = 371 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A ++ + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|229578811|ref|YP_002837209.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229582443|ref|YP_002840842.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] gi|238619167|ref|YP_002913992.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.4] gi|228009525|gb|ACP45287.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228013159|gb|ACP48920.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] gi|238380236|gb|ACR41324.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.4] Length = 371 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 37/276 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A ++ + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ GG GY + +I R YR+ A + +G G V Sbjct: 321 LQVFGGMGYAKGTTIERIYRD--ARLLRIGEGTDEV 354 >gi|332521255|ref|ZP_08397711.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix algicola 5H-3-7-4] gi|332042983|gb|EGI79181.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 390 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE GG+D+A + + K D Y L+G K F+++ + SD ++ A+ +G + Sbjct: 125 MAVTEPFGGSDVAGMRTTAVKKGD-TYVLNGSKTFITNGVYSDYIVVAAKTSPELGNKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + D G+ +L +K+G R++ T E+ F N L+G+ + Sbjct: 184 SMFIVDRDAKGVSATKL-DKLGWRASDTGEIAFDNVTIPASHLMGEEGKGFPYIMQHFAF 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L I + + +L A+ Y R G + ++ +AD D+ ++ Sbjct: 243 ERLIMGINAHARAEFALEYAVKYMGERQAFGKSIDKFQALRHTMADCFADMEVCKEFNYT 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A D+ + +EA I+K KMA VI + ++ +GG GY+EE +AR R Sbjct: 303 VAARLDKNEYVVKEAT-------ISKLRSTKMADEVIYQCLQMLGGYGYMEEYPMARLLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|294786063|ref|ZP_06751348.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27] gi|294486285|gb|EFG33650.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27] Length = 636 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|237745307|ref|ZP_04575788.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1] gi|229432536|gb|EEO42748.1| acyl-COA dehydrogenase [Fusobacterium sp. 7_1] Length = 637 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|150019864|ref|YP_001312118.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906329|gb|ABR37162.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 634 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGDYYILNGEKIFITNGGEADIYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + + +K+G RS+AT EL F++ + N+ Sbjct: 172 TTPNIGTRGISAFIVEKGSEGFSFGKHYDKMGIRSSATAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERVQFGKPICQQQIIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A + S EAA A K + + ++ +A++ GGS Sbjct: 289 ATKLRAARFLIYSAAELKGNHEHYSMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|326498703|dbj|BAK02337.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 436 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 18/285 (6%) Query: 171 HKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIY 226 H + R PT K P + IG L ++E G+D+ ++ + +K+ DG Y Sbjct: 145 HSNLCINQLVRHGSPTQKEKYLPKLISGDHIGALAMSEPNSGSDVVSMKCKAEKV-DGGY 203 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G+K W + P + ++ A+ + G + ++E G P Q+L +K+G R + Sbjct: 204 VINGNKMWCTNGPSAQTLVVYAKTDITAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRGS 262 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341 T EL F N F L V M + L+ +++ + M+ L + Y R+ Sbjct: 263 DTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVLAGGPIGLMQACLDVVLPYVRQ 322 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 323 REQFGRPIGEFQFLQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA---- 378 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V EA++C+GG+GYI E R R++ I G+ Sbjct: 379 ---AERATQVALEAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGT 420 >gi|323476742|gb|ADX81980.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus HVE10/4] Length = 371 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A ++ + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|262201223|ref|YP_003272431.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084570|gb|ACY20538.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 379 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 30/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + ++DG Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALNCRA-VVADGGYRINGAKAWITHGGIADVYNVFARTGEGSKGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +GL + + ++K+G + T + + + D + T E + I Sbjct: 186 VAR-----DTDGLRFGKPEDKMGLHAVPTTAANYDDAL--VDADRLIGT---EGQGLPIA 235 Query: 318 ---LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LDS + ++ + LA+A + YA+ R G +ID + +AD+A + +A Sbjct: 236 FSALDSGRLGIAAVATGLAQAALDAAVEYAQERTTFGRKIIDHQGLSFVLADMAAAVDSA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A A D + S AA A+++A A V +A++ GG GY + Sbjct: 296 RATYLDAARRRDAGMTYSRAAATAKLVA-------TDAAMKVTTDAVQVFGGYGYTRDFP 348 Query: 430 IARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 349 VERYMREAKITQIFEGT 365 >gi|297204601|ref|ZP_06921998.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197710669|gb|EDY54703.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 380 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 47/302 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TTP W P + S E L L+E G+D+ AI + ++ D Sbjct: 102 LTTPEQKARWLPGVISGE-------------TICALALSEPSAGSDLKAIRTTARRDGDE 148 Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + + G K F+++ ++D I+ + + G + ++ + G R +K+G ++ Sbjct: 149 -WVIDGSKTFITNGILADLVIVACKTDPEAGHKGISLIVVERGAEGFERGRKLDKVGMKA 207 Query: 284 NATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 T EL F F ++G+L P E + I A+ S++ Sbjct: 208 QDTAELFFHEVRVPAENLIGEEGRGFYHMMGNL-----PTERLAI------AVSSLAAAE 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 + A+ YA+ R G + + + A+ADI + AA + + + ++E Sbjct: 257 RAYVLALDYAKTRTAFGQPIGEFQANRFALADIRAKLNAARVYVDGCIMALFQGELTADE 316 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A KYW + VI M+ GG GY+ E IAR +R+S + G+ Sbjct: 317 AAAA-------KYWTSETGWEVIDRCMQLFGGYGYVNEYEIARIWRDSRVQRVFGGTSEI 369 Query: 450 MV 451 M+ Sbjct: 370 ML 371 >gi|148545434|ref|YP_001265536.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148509492|gb|ABQ76352.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 393 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|70996198|ref|XP_752854.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293] gi|66850489|gb|EAL90816.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus Af293] gi|159131607|gb|EDP56720.1| acyl-CoA dehydrogenase, putative [Aspergillus fumigatus A1163] Length = 437 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K +DG Y L+G K W +S + FI+ A ++ G + Sbjct: 178 LSEPASGSDAFALQTKAEKTADG-YKLNGSKMWITNSMEAGVFIVFANLDPSKGYKGITA 236 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMK 313 + + G + + K+G R+++T L F + G LLG+ + G + + + Sbjct: 237 FVVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGR 296 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I +++ G + A + RR+ G ++ M+ +A ++IAAA AL Sbjct: 297 IGIAAQMTGLAL-GAWENAASYVWNDRRQF--GQLIGTFQGMQHQLAQAYVEIAAARALV 353 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + ++AA A++ + ++A V + A+E +GG G++ E + Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVASSAVEWMGGMGFVREGIAEKM 406 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433 >gi|323474188|gb|ADX84794.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus REY15A] Length = 371 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A ++ + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANEIVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|325676123|ref|ZP_08155804.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553033|gb|EGD22714.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 385 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 21/262 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV------EG 251 + +TE G+D+A I + +DG Y L+G K F++ ++D +++ + + Sbjct: 124 IAMTEPGTGSDLANIGTTAVLSADGSHYVLNGAKTFITGGALADLVLVVCRTSPSTPEDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R G + L D + G R +KIG +++ T EL F++ G LG+ + Sbjct: 184 RAGLTI---LAVDTTSEGFAVGRKLHKIGLKASDTAELSFTDVEVPVGDRLGEEGAAFTY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L A+ + R +L AI Y + RHV G + K +A+ A D+ A Sbjct: 241 LTHNLAQERLSIALGGAATARAALQHAIAYVKDRHVFGKPVASFQNTKFVLAECATDVEA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 T ++ R D + +AA A++ +C + A VI + ++ GG GYI E Sbjct: 301 ITLMADRALELHDADELSVADAAKAKL-------FCTETAGKVIDKCLQLHGGYGYITEY 353 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR Y ++ + I G+ M Sbjct: 354 PIARLYADTRVSRIYGGTSEVM 375 >gi|226361951|ref|YP_002779729.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240436|dbj|BAH50784.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 381 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 32/287 (11%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K W P I S E I + ++E G+D+ AI + ++ G + ++G Sbjct: 110 QKRWLPDIVSGER-------------TIAVSMSEPGTGSDLRAIKTTARREGSG-WRITG 155 Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F++S M +D I+ A++ G ++EDG P G R +KIG ++ T EL Sbjct: 156 SKTFVTSGMQADLVIVAARIPDEDGGGFGLFVVEDGQP-GFERGRKLSKIGRKAQDTAEL 214 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLAEAIHYARRRH 343 F N + NV + ++ L+ L A+++V+ +L A+ YA+ R Sbjct: 215 FFQNV---EVQPENVLGEAGKGLRYLMANLAQERLSMAVVAVASAEYALELALSYAKERR 271 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G + + +A+++ + A R ++ + + +AA A K+W Sbjct: 272 AFGSPIGSFQANRFTLAELSTKVQIARIYLDRCLDAHGNGELTAADAAGA-------KFW 324 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ + ++ GG GY+EE +AR +R+S I G+ M Sbjct: 325 TTELEFEALDTCLQLHGGYGYMEEYEVARRWRDSRVQQIYGGTNQIM 371 >gi|197119937|ref|YP_002140364.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] gi|197089297|gb|ACH40568.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] Length = 380 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 31/258 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQV--EGRVGC--F 256 ++E G+D+A+I + + D Y ++G K F + P++ + +LA+ GR G F Sbjct: 124 VSEPGAGSDVASIRTTAVREGDE-YVINGTKVFSTNGPVASVYTVLARTSENGRNGLSFF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R GL +++ K+G R + T E+ N G LLG+ N G MK Sbjct: 183 LVER-----GTAGLSVGKIEKKLGQRGSKTSEMYLDNVRIPAGNLLGEEN--KGFHLAMK 235 Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 D + ++ + +A+ + ++R R G L + ++++ IAD A I A Sbjct: 236 ---DFDMSRPAIGAQALGIAQGAFDQMVRHSRERKTFGQQLCEHQMIQQIIADSATKIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L +R + +D+ + ++ +A + K + A + +A++ GG GY+++ Sbjct: 293 SRGLIYRASALYDKGQRNTK-------LASMGKLFASDAAMQITTDAIQVFGGYGYMQDY 345 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 346 PVERMFRDAKLTQIFEGA 363 >gi|91790023|ref|YP_550975.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91699248|gb|ABE46077.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 376 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-AFIMLAQVEGRVG-----C 255 LTE G+D +++ + K DG Y ++G K F++S + A I++A + G Sbjct: 123 LTEPHVGSDASSLKTAAVKDGDG-YVINGVKQFITSGKNGHAAIVIAVTDKGAGKKGMSA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308 F+VP G RL++K+G S+ T ++ F N G ++ G Sbjct: 182 FIVPT-----DAPGYVVARLEDKLGQHSSDTAQINFDNCRIPAENLIGAEGEGYRIALGA 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A SV R + A+ YA+ R G + + + +A+ A + A Sbjct: 237 LEGGRIGI----AAQSVGMARSAFEFALGYAKERQSFGTAIFNHQAVGFRLAECATKLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A+ D + +EAA A++ A +MA V + A++ +GG GY+ + Sbjct: 293 ARQLIWHAASLRDAGRPCLKEAAMAKLFAS-------EMAEEVCSAAIQTLGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRVCQIYEGTSD 365 >gi|260495500|ref|ZP_05815626.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33] gi|260197037|gb|EEW94558.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33] Length = 637 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|126434102|ref|YP_001069793.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126233902|gb|ABN97302.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 379 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 48/301 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT W P F+R + T LGLTE G+D+AAI + ++ D Sbjct: 102 LTTAEQRDRWLPA-FTRGENVT------------ALGLTEPGAGSDLAAIKTSARRDGDH 148 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K F++S + D I+L + R G +E+G+P G R +KIG R+ Sbjct: 149 L-VLNGQKTFITSGATCDLAIVLVRTGERDGRGTTFVAVENGTP-GFERGRPMHKIGRRA 206 Query: 284 NATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 T EL F + FG + +L P E + I + ++ Sbjct: 207 QDTAELFFDDCRVPVSNIVGEPGRGFGCAIANL-----PRERLSIAVAAVASARH----- 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L + +AR+R G L ++ IA++ DI R + ++ + + E Sbjct: 257 -ALELGLEHARQRSAFGAPLAQLQSVRMQIAEMHTDIVVLQEYVDRCVVALNDGELTAAE 315 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A KY ++ V+ ++ GG GY+EE IAR +R++ I G+ Sbjct: 316 AAGA-------KYKATELQWEVLDRVLQLFGGYGYMEEYPIARMWRDARIQRIYGGANEV 368 Query: 450 M 450 M Sbjct: 369 M 369 >gi|182439898|ref|YP_001827617.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780564|ref|ZP_08239829.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|178468414|dbj|BAG22934.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660897|gb|EGE45743.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 390 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257 L+E G+D A++ ++ + D W ++D + +LA+ VEG G FL Sbjct: 133 LSEPASGSDAASLRTKAVRDGDDWVITGTKAWITHGGVADFYTVLARTGVEGPRGITAFL 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T +L F G +GD + I L Sbjct: 193 VP-----GDAEGLNAAVPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIALS 244 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + LA EA+ YA R G + D ++ +AD+A I A A Sbjct: 245 ALDSGRLGIAACAIGLAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S +AA A K +C A V +A++ +GG GY + + Sbjct: 305 LYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVE 357 Query: 432 RHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 358 RLMREAKVLQIVEGT 372 >gi|26986902|ref|NP_742327.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24981507|gb|AAN65791.1|AE016205_4 glutaryl-CoA dehydrogenase [Pseudomonas putida KT2440] Length = 393 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|330790553|ref|XP_003283361.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum] gi|325086786|gb|EGC40171.1| hypothetical protein DICPUDRAFT_44750 [Dictyostelium purpureum] Length = 419 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 25/258 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D ++ ++ K DG + L+G K W ++ + FI++A V+ G + Sbjct: 160 LSESGSGSDAFSLATRATKQPDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITA 219 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317 + + S GL + ++K+G R+++T E+ N + +LG L + KI I Sbjct: 220 FIVESSNPGLKIGKKEDKLGIRASSTCEVILDNCVVSSDSILGQLG------KGYKIAIE 273 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ + ++ + LAE I Y R G + + M+ AD+A+DI AA Sbjct: 274 GLNEGRIGIAAQMLGLAEGVFESTIPYLMERKQFGKPIAEFQGMQFTYADLAIDIEAAKL 333 Query: 372 LSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++ A R +EA + A + K + ++A + + +GG G+ +E Sbjct: 334 LTYNAA--------RMQEAGLPFVHQASMAKLYASRVAEKTASACISMLGGVGFTKEFPA 385 Query: 431 ARHYRESPANSILLGSGN 448 + +R+S I G+ N Sbjct: 386 EKFFRDSKVGQIYEGTTN 403 >gi|302185797|ref|ZP_07262470.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. syringae 642] Length = 601 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|237741102|ref|ZP_04571583.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13] gi|229430634|gb|EEO40846.1| acyl-COA dehydrogenase [Fusobacterium sp. 4_1_13] Length = 636 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|186472764|ref|YP_001860106.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184195096|gb|ACC73060.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 596 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 91/390 (23%), Positives = 173/390 (44%), Gaps = 70/390 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S ++ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGDWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + ++ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSYRIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVHADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358 M I++ + + G+ +S A A + R V G +I P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + + AL++ A + D+AK R+E A + PI K W +++ V Sbjct: 348 LSTMRALTEGSRALAYVAAAHSDIAHHHADQAK-RAEHLAIYEYLVPIVKGWSTELSVDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 + ++ GG G+IEE A++YR++ I G+ D++ T Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGR------------KT 454 Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLA 501 L +D G+ K ++ + ++ K+ KG A Sbjct: 455 L-RDGGAVAKALLADIAQTVEALKQHKGAA 483 >gi|256846241|ref|ZP_05551698.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2] gi|256718010|gb|EEU31566.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2] Length = 636 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|206890770|ref|YP_002248410.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742708|gb|ACI21765.1| acyl-CoA dehydrogenase, short-chain specific [Thermodesulfovibrio yellowstonii DSM 11347] Length = 386 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 39/267 (14%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC- 255 + LTE G+D I + K D Y L+G K W + ++ + ++A + G Sbjct: 120 VAFALTEPNAGSDAGGIQTTATKDGD-YYILNGRKQWITNGGEAEIYTVIALTDKSKGAR 178 Query: 256 ----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304 F+V E G+P G + + +NK+G R++AT EL F N G Sbjct: 179 GASAFIV----EKGTP-GFSFGKKENKMGIRASATRELIFEDCKIPKENMLG------RE 227 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 G + MK LD + + V + +A EA +A++R G +I ++ + Sbjct: 228 GMGFIVAMKT---LDQSRVGVGAQGLGVAQGAFEEAAKFAKQRVQFGQPVISFQAVQHML 284 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A+ I AA AL + +A D S +++ A MA K + +A V +A++ + Sbjct: 285 ADMAIQIEAARALIYSVARYID---SGAKDITKASAMA---KTFATDVAMKVTVDAVQVM 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GGSGY+++ + + R++ I G+ Sbjct: 339 GGSGYMKDYPVEKMMRDAKILQIYEGT 365 >gi|71737907|ref|YP_276816.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558460|gb|AAZ37671.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 601 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTST-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G+ G + + ++ ++ G LT K+ +A+ Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509 >gi|127513092|ref|YP_001094289.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella loihica PV-4] gi|126638387|gb|ABO24030.1| acyl-CoA dehydrogenase domain protein [Shewanella loihica PV-4] Length = 596 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 41/304 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD+A + ++ + + + Y +SG K F+SS D ++LA+ Sbjct: 162 MNLTEAHAGTDLALLRTKAKPVGEDTYAISGEKIFISSGDHDLADNIVHLVLARLPDAPD 221 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + F VP+ L +DG+ NG+ L++K+G N+T + F G L+G+ Sbjct: 222 GVKG-ISLFAVPKYLVNDDGTLGCRNGVEASALEHKMGIHGNSTCVMVFDGAIGELVGEP 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG---------GIL 349 + + M L + + ++ A+ YAR R +SG IL Sbjct: 281 HQGLRAMFTMMNEARLGVGVQGLGVSEIAYQNALSYARERLQGRALSGVKESESPADPIL 340 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYW 403 + V + +A A + A AL + A DE+ ++ A A + P+ K + Sbjct: 341 VHGDVRRMLMAQKAFN-QGARALMGQQALWLDESHRHQDKAKATIAAKLAALFTPVVKGF 399 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460 +A + GG GYI E + + R+S I G+ LD++ L +K Sbjct: 400 VTDQGFKACVDAQQVYGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKLLADK 459 Query: 461 GTNL 464 G L Sbjct: 460 GEAL 463 >gi|229082555|ref|ZP_04215018.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] gi|228700987|gb|EEL53510.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] Length = 379 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + K+ + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKVAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|77458036|ref|YP_347541.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77382039|gb|ABA73552.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 382 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 17/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + Q + + DG Y +SG K F++S + + +A G G + Sbjct: 127 LAVTEPGGGSDVANL--QTRAVRDGDYYRVSGSKTFITSGVRADYYTVAVRTGAPGFGGI 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 LL + S G R K+G ++ T EL F + G L+G N+ + Sbjct: 185 SLLLIEKSTPGFTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQS 244 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+M+ +++L E++ +A+ R G + V+K +A++A + + ++R Sbjct: 245 ERLALALMANMTAQLALEESVKWAKEREAFGKPIGKFQVIKHRLAEMATTLEVSREFTYR 304 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A +S +E + A+ A T + + EA++ +GG GY+ E + R YR Sbjct: 305 QAAKMAAGQSVIKEISMAKNFATDT-------SDRITNEAVQILGGLGYVRESLVERLYR 357 Query: 436 ESPANSIL-LGSGNAMVLD 453 + N IL +G G V++ Sbjct: 358 D---NRILSIGGGTREVMN 373 >gi|313496530|gb|ADR57896.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 393 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGAMGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|144900128|emb|CAM76992.1| acyl-CoA dehydrogenase family protein [Magnetospirillum gryphiswaldense MSR-1] Length = 586 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 60/311 (19%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ + E+ T + LTE G+D+AAI ++ D Y +SG K F+ Sbjct: 150 PKMVTGEWTGT-------------MNLTEPGAGSDLAAIRTKAVPEGDH-YRISGSKIFI 195 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNK 278 + M + I L A V+G + F+VP+ L + G+ N L++K Sbjct: 196 TYGDHEMVENIIHLVLARLPDAPAGVKG-ISLFIVPKFLVNADGSLGARNDAVCASLEHK 254 Query: 279 IGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---L 332 +G + T + F G L+G+ N +E M ++ + + G+ ++ Sbjct: 255 LGIHGSPTAVMAFGEKDGAIGTLVGEANRG---LEYMFTMMNHARQAVGLQGLAIAERAY 311 Query: 333 AEAIHYARRRHVSG-----------GILIDQPVMKRAIADIALDIAAATALSFR------ 375 +A++YAR R V G GI ++ P ++R + + I A L + Sbjct: 312 QQALYYARER-VQGKPTGWTGSGPTGI-VNHPDVRRMLMTMKCQIEAMRGLIYSAAAYVD 369 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A++ D+A R+ A + P+ K W ++ + + ++ GG GY+EE A+H+R Sbjct: 370 IAHNHDDAAERARAQLLADLYTPLVKGWSTELGNVIASLGVQVHGGMGYVEETGAAQHFR 429 Query: 436 ESPANSILLGS 446 ++ +I G+ Sbjct: 430 DARITTIYEGT 440 >gi|186475529|ref|YP_001856999.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184191988|gb|ACC69953.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 596 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 91/390 (23%), Positives = 172/390 (44%), Gaps = 70/390 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + P++ S + T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSEEQKQTYVPRLISGNWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLV 258 D+A + ++ + DG Y + G K F++ M+D + L EG G F+V Sbjct: 171 DLALVRTRAEPQGDGSYRIFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L DGS N + +++K+G +++ T L+F + G L+G+ N +E Sbjct: 231 PKFLVHADGSLGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS-------LAEAIHYARRRHVSGGI-----LIDQPVMKRA 358 M I++ + + G+ +S A A + R V G +I P ++R Sbjct: 288 YMFIMMNAARFAVGMQGVAISDRAYQKAAAYAKERVQSRPVDGSSKQAVSIIHHPDVRRM 347 Query: 359 IADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ + + AL++ A + D+AK R+E A + PI K W +++ V Sbjct: 348 LSTMRALTEGSRALAYVAAAHSDIAHHHADQAK-RAEHLAIYEYLVPIVKGWSTELSVDV 406 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 + ++ GG G+IEE A++YR++ I G+ D++ T Sbjct: 407 TSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLVGR------------KT 454 Query: 472 LEQDLGSSGKKVITILRDSISLCKEDKGLA 501 L +D G+ K ++ + ++ K+ KG A Sbjct: 455 L-RDGGAVAKALLADIAQTVEALKQHKGAA 483 >gi|121606366|ref|YP_983695.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120595335|gb|ABM38774.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 598 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 59/353 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTDAQKKLYLPKLVSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+ + ++ + +DG + L+G+K F+S+ D ++LA++ +G G F+V Sbjct: 175 DLGMLRTKAEPQADGTFKLTGNKIFISAGEHDMTSNILHLVLARLPDAPQGSKGISLFIV 234 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + EDGS NG+ L++K+G NAT ++ + G ++G N Sbjct: 235 PKFNVNEDGSIGSRNGIYCGGLEHKMGIHGNATAQIVLEDAVGTMVGAPNKGLA-----A 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353 + + +++A + V + L E A+ YA+ R +SG D+P Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIVHPDVR 349 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + +A A+ +A L + K R + ++ PI K + Sbjct: 350 KMLLTAKAYAEGGRALAIYCTLLLDKELYHPDEKVRKDSGEIVALLTPIVKAFLTDNGHI 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 M+ GG GY++E + + R++ N I G+ LD+L G N Sbjct: 410 ATNACMQVFGGHGYVKEWGMEQLVRDNRINMIYEGTNTIQSLDLLGRKILGNN 462 >gi|294783831|ref|ZP_06749153.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA] gi|294479643|gb|EFG27422.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA] Length = 636 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F+++ +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A V+ +A++ GGS Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|212635764|ref|YP_002312289.1| acyl-CoA dehydrogenase [Shewanella piezotolerans WP3] gi|212557248|gb|ACJ29702.1| Acyl-CoA dehydrogenase [Shewanella piezotolerans WP3] Length = 596 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 54/353 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + A+ R+ + + K+ S E+ T + LTE GT Sbjct: 125 MYPGLTHGAYAAIHVHGNDRLKQKYLEKLVSGEWTGT-------------MNLTESHAGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA---------QVEGRVGCFL 257 D+A + ++ + ++G K F+SS ++D I L V+G + F Sbjct: 172 DLALLRTKAVPAGQDTFAITGEKIFISSGDHDLTDNIIHLVLARLPDAPKGVKG-ISLFA 230 Query: 258 VPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+++ EDGS N LC L++K+G N+T + F G L+G + + M Sbjct: 231 VPKVMVNEDGSLGELNSLCAASLEHKMGIHGNSTCVMNFDGAIGELVGAPHQGLRAMFTM 290 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGILIDQPVM---------- 355 L I + ++ A+ YA+ R V L P++ Sbjct: 291 MNQARLGVGIQGLGVSDIAYQNALAYAKDRIQGRALSGVKNANLAADPILVHGDVRRMLL 350 Query: 356 -KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +++ + A + AL A ++ + + A A + PI K + + Sbjct: 351 SQKSFNEGARALMGQQALWLDEAERHNDPQQQKRAAQLAALFTPIVKGFVTDQGFKACVD 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 A + GG GYI E + + R+ + I G+ LD++ + +KG L Sbjct: 411 AQQVFGGHGYIHEWGMEQFVRDIRISMIYEGTNGVQALDLVGRKVMADKGAAL 463 >gi|311695467|gb|ADP98340.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 600 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 37/316 (11%) Query: 177 KIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 ++F E T P M + + LTE G+ +A I + +G Y + G K ++ Sbjct: 138 RVFGNEQQKTTFLPNMLSGRFSGTMALTEPHAGSSLADIRTSASPTDEGHYLIKGAKIYI 197 Query: 236 S---SPMSDAFI--MLAQVEGR------VGCFLVPRLLED--GSP---NGLCYQRLKNKI 279 S ++D + +LA+++G + F+VP+ L D G+P NG+ L +K+ Sbjct: 198 SGGEQSITDNIVHMVLAKIKGAPAGVKGISLFIVPKFLVDDEGNPTERNGVSLAGLIHKL 257 Query: 280 GNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 G R + L F + G+L+G+ L + + ++ + +A++ G SL Sbjct: 258 GYRGTTSTALSFGDDAPCHGYLVGEPHQGLKYMFQMMNEARVGVGFGAAVIGYRGYMHSL 317 Query: 333 AEAIHYARRRHVSGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-- 383 A + R S +ID ++R + AL A D+ Sbjct: 318 EYAKDRLQGRKASEKNPESPQVPIIDHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHT 377 Query: 384 ----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + R E ++ P+ K W + P A++ GG+GY E + + +R++ Sbjct: 378 HPDEQKRQEAGKLLDLLTPVIKAWPSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRL 437 Query: 440 NSILLGSGNAMVLDVL 455 N I G+ +D+L Sbjct: 438 NPIHEGTNGIQAMDLL 453 >gi|71895109|ref|NP_001026411.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus gallus] gi|53132103|emb|CAG31873.1| hypothetical protein RCJMB04_12m17 [Gallus gallus] Length = 433 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ +K D Y ++G K W + + F ++A + G C Sbjct: 177 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWITLAEHAGVFFVMANTDPASGYKGITC 235 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V R E GL + ++K+G R+++T + F N + + N+ + K Sbjct: 236 FIVDRDTE-----GLHVGKKEDKLGIRASSTCPVTFENV---KVPETNILGQIGQGYKYA 287 Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ A+ Y + R G + D M+ IA +A + AA Sbjct: 288 IGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGKRIFDFQAMQHQIAQVATQLEAA 347 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + K +EA+ A KY+ ++A ++ +E +GG G+ + Sbjct: 348 RLLTYNAARLAETGKPFIKEASMA-------KYYAAEVATLTTSKCIEWMGGVGFTKNYP 400 Query: 430 IARHYRESPANSILLGSGN 448 I ++YR+ +I G+ N Sbjct: 401 IEKYYRDCKIGTIYEGTSN 419 >gi|239625370|ref|ZP_04668401.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA] gi|239519600|gb|EEQ59466.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA] Length = 380 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 140/336 (41%), Gaps = 52/336 (15%) Query: 143 MAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 +A+++AG+ ++ T ++ V L TP + +A D N+ G Sbjct: 76 LAKVDAGYAITFVTTFVALRNVILAGTPEQAQYFA--------DIINRGSFA------GF 121 Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LTE G+D A I +G + DG Y L+ K F+++ +SD ++ + G + Sbjct: 122 ALTEPNAGSDPAGI--RGTAVLDGDEYVLNATKTFITNGALSDIYVGFFKTSPEAGHKGI 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 + D + G+ +NK+G R + T +L F N F L LN+ Sbjct: 180 SAFIIDRNMPGVSVGAHENKMGLRLSNTTDLIFENVRVPRDRMLGPEGSGFKLALNALNL 239 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 S V A ++V M+ +L EA+ YA+ R +I+ +++ +AD+A+ Sbjct: 240 SRAFV-----------ATLAVGIMQRALDEAVKYAKERKQFNTPIINFQMVQALLADMAI 288 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ L D +E + ITK + A V + A++ GG GY Sbjct: 289 KVEASRCLVNNTMRMMDAGSLVQKEGS-------ITKTFVTDCAQEVTSNAVQVFGGYGY 341 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E + + R+ I G+ + + N+L K Sbjct: 342 SREYPVEKLMRDVKVFQIFEGTNQIQRMTIANVLNK 377 >gi|152984092|ref|YP_001351076.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150959250|gb|ABR81275.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 600 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/310 (23%), Positives = 134/310 (43%), Gaps = 50/310 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + +DG Y + G+K F+S P+S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEAAADGSYRIRGNKIFISGGDHPLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L + G N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFG 270 Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G + + M +I + + + ++ +G SL YAR R Sbjct: 271 DNGACVGYLVGKPHQGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARER--P 324 Query: 346 GGILIDQ--------PVMKRA-----------IADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ A + A D+ A F + + ++ + R Sbjct: 325 QGRLPDGKDPSAPQVPIIRHADVRRMLLAQKTYVEGAFDLGLYAARLFDDSQTLEDDEQR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ PI K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 RQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLN 456 LD+L Sbjct: 445 HGIQSLDLLG 454 >gi|160895625|ref|YP_001561207.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160361209|gb|ABX32822.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 385 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 47/286 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 TP W PK+ + E + LTE G+D A++ + I DG Sbjct: 102 TPEQQAAWLPKLATGE-------------IMASFALTEPEAGSDAASLRTTA--IRDGDH 146 Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G+K F++ +P + F ++A+ + G V F+V D G+ + + K Sbjct: 147 YVVNGNKRFITNAPHAGMFTLMARTDPANKGAGGVSAFIV-----DAKSPGISFGKNDVK 201 Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334 +G + T ++ F N L+G L G MK+L D + ++ + V +A+ Sbjct: 202 MGQKGAHTCDVFFDNVRVPAANLIG-LKEGQGFKTAMKVL---DKGRIHIAAVSVGVAQR 257 Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 A++YA R G + + +++ +AD ++ AA + A DE ++ S EA Sbjct: 258 ILRDALNYALERKQFGQPICEFQLVQAMLADSQAELYAAECMVIDAARRRDEGRNVSTEA 317 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + K + +M V A++ +GGSGY+ E I R YR+ Sbjct: 318 S-------CCKMFATEMVGRVADRAVQILGGSGYLAEFGIERFYRD 356 >gi|213023648|ref|ZP_03338095.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 145 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%) Query: 25 LNQPPLFIGMNAYSSDSLLVALIANFPSVVHKEL-ELLGEYVLSCTAQELARMANYNTPQ 83 NQP N + SD L ++ + +L +G+ + + + EL R+AN + P+ Sbjct: 9 FNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLASIGQQLGTAESLELGRLANAHPPE 68 Query: 84 LHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLM 143 L Y P G+R D V FHPAWH L++ + +H W+ R + RAAR L Sbjct: 69 LLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLH 124 Query: 144 AQLEAGHLMSPSVTSAS 160 AQ+EAG L ++T A+ Sbjct: 125 AQVEAGTLCPVTMTFAA 141 >gi|330954908|gb|EGH55168.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae Cit 7] Length = 601 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|259488893|tpe|CBF88712.1| TPA: acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_1G14850) [Aspergillus nidulans FGSC A4] Length = 439 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 33/300 (11%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 +V + W PK+ T L+E G+D A+ ++ +K +DG Y L Sbjct: 161 QVQRTWLPKL--------------ATGTVGSFCLSEPVSGSDAFALQTKAEKTADG-YKL 205 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +G K W +S + FI+ A + G + + + G + + K+G ++++T Sbjct: 206 NGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIKASSTC 265 Query: 288 ELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 L F + G LLG+ + G + + +I I +++ G + A+ + R Sbjct: 266 VLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAAKYVWNDR 324 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R+ G ++ + M+ IA +IAAA AL + A + + ++AA A++ Sbjct: 325 RQF--GQLVGEFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL----- 377 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + LL+K Sbjct: 378 --YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435 >gi|254420905|ref|ZP_05034629.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196187082|gb|EDX82058.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 594 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 48/350 (13%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTP--RVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + A A M P +TS++ + + + + PK+ S E+ T Sbjct: 115 MTAGASAAFSMYPGLTSSAYAGIHASASDEIKAKYLPKMVSGEWSGT------------- 161 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGRV- 253 + LTE + GTD+ + ++ DG Y ++G K ++S+ SD I +LA++EG V Sbjct: 162 MNLTEPQCGTDLGMVRTKAVPNGDGSYSITGQKIWISAGEHDFSDNIIHTVLARIEGAVP 221 Query: 254 -----GCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD-- 301 F+VP+ L EDGS N L L++K+G NAT +++ G+LLG+ Sbjct: 222 GIKGLSLFVVPKYLVNEDGSLGERNTLECAGLEHKMGIHGNATCVMQYDGAKGWLLGEEG 281 Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351 +N + + ++ L + + + + A + R ++G +I Sbjct: 282 RGMNNMFVVMNEARLGTGLQGLAIGTAAYQAAAEFAKDRLQGRSLTGPKNPEGPADPIIV 341 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKYWCCK 406 P ++R + + + A A D KS E A Y ++ P+ K + Sbjct: 342 HPDVRRMLLEARAFVEGGQAFILWTALHADLEKSEDEAVATKAKDYMGLLTPVLKAYLTD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 V + AM+ GGSGY E +++ R++ I G+ LD++ Sbjct: 402 KGFHVASLAMQVHGGSGYTEHFPASQYLRDARITMIYEGTNGIQALDLVG 451 >gi|110834101|ref|YP_692960.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110647212|emb|CAL16688.1| isovaleryl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 387 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++T + K D Y L+G+K W + P + +++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMTLRADKQGDH-YVLNGNKMWITNGPDAHTYVIYAKTDTNAGPRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + S G + +K+G R + T EL F + + + NV E +K+L+ Sbjct: 187 TAFIVERSFAGFSQAQKLDKLGMRGSNTCELVFQDC---RVPEENVLGSVGEGVKVLMSG 243 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG + +A + Y R G + + +M+ IAD+ + + A+ + Sbjct: 244 LDYERTVLSGATTGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIADMYVTLNASRSY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + +C + A + EA++ +GG+GYI E R Sbjct: 304 LYNVAKACDRGETNRKDAAGVIL-------YCAENATKMALEAIQALGGNGYINEYPTGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|73539029|ref|YP_299396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72122366|gb|AAZ64552.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 387 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 14/265 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE G+D+A +T+ + D Y ++G K +++S M + +A G G V Sbjct: 133 LAITEPGAGSDVAHLTTSACREGD-HYVVNGTKLYITSGMRADYFTVAVRTGDPGASGVS 191 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL +G GL LK K+G ++ T +L F N L+G+ + Sbjct: 192 LLLIEGDTPGLSRTELK-KMGWWASDTAQLYFDNCRVPVDNLIGEEGKGFAAITKNFNHE 250 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A + +V +A+ +A RH G L D V++ + D+A I A A+ L Sbjct: 251 RLALAAAACGYAQVCFHDALAWAGDRHTFGKRLADHQVVRHQLVDMATRIEATRAMLDDL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A D+ + + A A+ MA T +C A++ +GG GY+ + R YRE Sbjct: 311 AARLDDGAAPVAQIAMAKNMATRTFQFCAD-------RAVQLLGGMGYMRGSRVERLYRE 363 Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461 +++G G ++ L + G Sbjct: 364 --VKVMMIGGGAEEIMKDLAARQLG 386 >gi|285016972|ref|YP_003374683.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73] gi|283472190|emb|CBA14697.1| putative acyl-coa dehydrogenase protein [Xanthomonas albilineans] Length = 387 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 36/281 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLRAEARGD-RYVLNGNKMWITNGPDADVLVVYAKTDPAGGARGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + + G + +K+G R + T EL F N G + G + V Sbjct: 187 TAFVVEKTMPGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENVLGEVGGGVRV------- 239 Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD + +SG M +L + Y RH G + + +M+ +AD+ + + Sbjct: 240 --LMSGLDYERVVLSGGPLGLMAAALDVVLPYVHERHQFGEAIGNFQLMQGKLADMYVGL 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A + +A S D ++ ++AA A + A W + +A++ +GG+GYI Sbjct: 298 NACRAYVYAVARSCDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYIN 350 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R +R++ I G+G + + +L G LFEQ Sbjct: 351 DYPTGRLWRDAKLYEI--GAGTSEIRRIL----IGRELFEQ 385 >gi|312196625|ref|YP_004016686.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311227961|gb|ADP80816.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 383 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 81/311 (26%), Positives = 131/311 (42%), Gaps = 56/311 (18%) Query: 169 RVHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 R H D F R D + + + + LTE G+D+AA+ + ++ D Sbjct: 89 RTHLDVILPYFRRYCDAAQRDRWFPGISSGELMTAIALTEPDTGSDLAAVRTAARREGDH 148 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y L+G K +++ ++D I+L + R G L+ ++EDG P G R K Sbjct: 149 -YVLNGAKTYITGGSLADLVIVLCRTSTDPANRRDGLTLL--VVEDGMP-GFVKGRKLEK 204 Query: 279 IGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 IG ++ TVEL F++ FG+L +L P E + I A+ S Sbjct: 205 IGLKAQDTVELSFTDVVVPVANRLGEADQAFGYLGANL-----PQERLAI------AVGS 253 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR-----LANS 379 V+ R +L + Y RH+ G + K +A ++ +I A A R +A S Sbjct: 254 VAQARAALDLTVEYVMSRHIFGRPVSGFQNTKFELAAMSTEIEAGQAFLDRGIEQLVAGS 313 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A + AR+ K +C ++ V+ ++ GG GYI E IAR Y ++ Sbjct: 314 LSPADA-------ARV-----KLFCTELQGRVVDRCLQLFGGFGYITESPIARLYADARV 361 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 362 TRIYGGTSEVM 372 >gi|194700346|gb|ACF84257.1| unknown [Zea mays] gi|195642912|gb|ACG40924.1| isovaleryl-CoA dehydrogenase [Zea mays] gi|223947637|gb|ACN27902.1| unknown [Zea mays] Length = 407 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 31/291 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + PK+ S E+ IG L ++E G+D+ ++ + +K+ DG Sbjct: 129 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 173 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P + ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 174 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 232 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ + M+ L + Y R Sbjct: 233 SDTCELVFENCFVPCENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 292 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 293 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 349 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A V +A++C+GG+GYI E R R+ A +G+G + V Sbjct: 350 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 394 >gi|237739189|ref|ZP_04569670.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31] gi|229423789|gb|EEO38836.1| acyl-COA dehydrogenase [Fusobacterium sp. 2_1_31] Length = 636 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F+++ +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A V+ +A++ GGS Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|255570831|ref|XP_002526368.1| acyl-CoA dehydrogenase, putative [Ricinus communis] gi|223534327|gb|EEF36039.1| acyl-CoA dehydrogenase, putative [Ricinus communis] Length = 406 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 35/289 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + PK+ S E+ +G L ++E G+D+ ++ + + DG Sbjct: 130 SPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADCV-DGG 174 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P++ ++ A+ + + G + ++E G P Q+L +K+G R Sbjct: 175 YILNGNKMWCTNGPVAQTLVIYAKTDVKAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 233 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIH 337 + T EL F N F + D NV + + +++ L+ ++S M+ L + Sbjct: 234 SDTCELVFENCF---VPDENVLGQEGKGVYVMMSGLDLERLVLSAGPLGIMQACLDVILP 290 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R+R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 291 YIRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDRGKVDPKDCAGVILCA 350 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++C+GG+GY+ E R R++ I G+ Sbjct: 351 A-------ERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 392 >gi|94501687|ref|ZP_01308202.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65] gi|94426174|gb|EAT11167.1| probable acyl-CoA dehydrogenase [Oceanobacter sp. RED65] Length = 594 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 42/294 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE GTD+ I ++ + +DG Y +SG K F++ M++ I L A Sbjct: 164 MDLTEPHCGTDLGIIRTKAEPQADGSYAISGTKIFITWGEHDMAENIIHLVLAKLPDAPA 223 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 +G + FLVP+ L EDGS N + +++K+G + +AT + + G+L+G++ Sbjct: 224 GPKG-ISLFLVPKYLVNEDGSLGEKNTMGCGSIEHKMGIKGSATCVMNYDGAKGWLVGEV 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRV---SLAEAIHYARRR------------HVSGG 347 N + M ++ + + + G+ V S A+ YA R + Sbjct: 283 NKG---LAAMFTMMNYERVAVGIQGLGVAENSYQNAVLYANDRLQSRAPTGKQFPEKAAD 339 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITK 401 +I P ++R + + + + A S + D AK +E A ++ P+ K Sbjct: 340 PIIVHPDVRRMLMTMRANTEGSRAFSTYASRWLDLAKFSEDEDVRKNAEAMVALLTPVVK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + +A E + GG G+I E +H R+ I G+ LD++ Sbjct: 400 SFLTDLALESAIEGQQVFGGHGFIREWGQEQHVRDIRITQIYEGTNGIQSLDLI 453 >gi|257483065|ref|ZP_05637106.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624776|ref|ZP_06457730.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650647|ref|ZP_06481990.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298489178|ref|ZP_07007197.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156260|gb|EFH97361.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326436|gb|EFW82489.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331592|gb|EFW87530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872316|gb|EGH06465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 601 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 85/402 (21%), Positives = 164/402 (40%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G+ G + + ++ ++ G LT K+ +A+ Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509 >gi|124487759|gb|ABN11966.1| putative acyl-coenzyme A dehydrogenase, short chain [Maconellicoccus hirsutus] Length = 297 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 L+E G+D AA T+ QK +D + L+G K W + S+A I+ A + Sbjct: 37 FALSEPGNGSDAGAASTTATQKGND--FVLNGSKCWITNGYESEAGIVFATTDKSKKHKG 94 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + L + GL + ++K+G R ++T L F + ++ N+ P KI ++ Sbjct: 95 ISAFLINKPCPGLTLGKKEDKLGIRGSSTCTLNFEDC---IVNGENILGEPGMGFKIAMM 151 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + +A+A + YA R G ++ ++ IAD+AL + +A Sbjct: 152 SLDAGRIGIASQALGIAQASLDVAVEYASTRTAFGASILKLQAIQTKIADMALRLESARL 211 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEER 428 L++R A D+ + ++EAA A++ A + A + +CI GG GY+ + Sbjct: 212 LTWRAAYLKDKKQPFTKEAAMAKLAA----------SEAATFNSHQCIQILGGMGYVSDM 261 Query: 429 SIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 262 PAERHYRDARITEIYEGT 279 >gi|325969830|ref|YP_004246022.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28] gi|323709033|gb|ADY02520.1| acyl-CoA dehydrogenase [Vulcanisaeta moutnovskia 768-28] Length = 387 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 45/309 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T R ++ PKI S E+ L+E G+D AAI ++ ++ G + Sbjct: 104 TDRQREEILPKIASGEW-------------VASYALSEPCCGSDAAAIETRAER-RGGEW 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV---EGR---VGCFLVPRLLEDGSPNGLCYQRLK-NK 278 ++G K W +D +++ A+ E R V FLV R C + K Sbjct: 150 VINGRKIWITQGAYADIYLLFARTGPKEARHKAVTAFLVKR--------SDCVEVSKLEM 201 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA---- 333 +G R E++F++ ++GD +V E +I ++ LD A + +SG+ + L+ Sbjct: 202 MGMRGAGEAEVKFNDC---VVGDDDVLGKVNEGFRIAMVTLDLARIGISGVALGLSQGVL 258 Query: 334 -EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 EA+ +A+ R G LID ++ +ADI + ++++ A +D +++ ++ Sbjct: 259 DEALEWAKTRTAFGKPLIDWEWVQFQLADIKAKLEIGRTVTYKAAWLYD-----NKDPSF 313 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + A I K + +MA + + ++ +GG GY +E R YR++ I G+ + Sbjct: 314 V-LYASIAKLYTAQMAVEIARDGVQILGGFGYSKESFSERAYRDAKVLEIAEGTNEVQRM 372 Query: 453 DVLNLLEKG 461 + +L +G Sbjct: 373 VIYKILTRG 381 >gi|229542902|ref|ZP_04431962.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229327322|gb|EEN92997.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 380 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 25/258 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 PM K GLTE G+D ++ + DG + ++G K ++++ +++ Sbjct: 113 PMAKGEALGAFGLTEPNAGSDAGGTRTKA--VLDGDEWVINGEKCWITNAEYARQVIVTA 170 Query: 249 VEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 V G+ G ++ ++ G+ K+G R + T ++ N LLGD N Sbjct: 171 VTGKRENGRNIISAIIVPADAPGVAITSPYEKMGVRGSNTCQIVLENVRVPRENLLGDEN 230 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + L LD +S++ + V +A+A + YA+ R G + ++ Sbjct: 231 KGFS-----QFLYTLDGGRISIAALSVGIAQAAFEKALRYAKERMQFGQAISKFQAIQFK 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A++I A ++ A D+ K S+EAAYA++ A + C +A++ Sbjct: 286 LADMAMEIDLARNAVYKAAWLKDQGKPFSKEAAYAKLFASEMGFRVCN-------QAIQI 338 Query: 419 IGGSGYIEERSIARHYRE 436 GGSGY+ E + RH R+ Sbjct: 339 HGGSGYMREYGVERHLRD 356 >gi|330967254|gb|EGH67514.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 601 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|229094455|ref|ZP_04225526.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|301056809|ref|YP_003795020.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI] gi|228688937|gb|EEL42765.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|300378978|gb|ADK07882.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI] Length = 379 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A D+ AA L+++ A E +E+A +++ A A V EA++ Sbjct: 286 ADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GDAAMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|327188068|gb|EGE55295.1| putative acyl-CoA dehydrogenase protein [Rhizobium etli CNPAF512] Length = 591 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/442 (22%), Positives = 183/442 (41%), Gaps = 66/442 (14%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LG+ ++ E R A L G G D +V W L R I G + Sbjct: 31 LGDDLVDAILSEAGRFATEEVAPLSDIGDRQGARLVDGEVRLPDGWRDLYRNWIAGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175 ++F + A ++ + ++P++T ++ A+ T + + + + Sbjct: 91 LTAPQAFGGQALPDMLNVAALEMWNSGSMA--FALAPTLTMGAIEAVHTHGSAALKETYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE G+D+ A+ ++ ++ DG Y + G K F+ Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DGS N L L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + + + G+L+G+ N + M +++A ++V V+ Sbjct: 256 GIHGSPTCTMIYGDGRFGGEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310 Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377 +AEA + YAR R G+ ++D P + R + + A A+S+ A Sbjct: 311 IAEAATQKALAYARERTQGRAPGSTGPGMSPIVDHPDVARMLLTMRALTQGARAISYACA 370 Query: 378 NSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 ++ D A R A ++ PI K + V + ++ GG G+IEE AR+ Sbjct: 371 HAIDMSRRAGDRRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGIGFIEETGAARYL 430 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R++ I G+ +D++ Sbjct: 431 RDARIAPIYEGTNGIQAIDLVT 452 >gi|67517089|ref|XP_658428.1| hypothetical protein AN0824.2 [Aspergillus nidulans FGSC A4] gi|40746498|gb|EAA65654.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 437 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 33/300 (11%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 +V + W PK+ T L+E G+D A+ ++ +K +DG Y L Sbjct: 159 QVQRTWLPKL--------------ATGTVGSFCLSEPVSGSDAFALQTKAEKTADG-YKL 203 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +G K W +S + FI+ A + G + + + G + + K+G ++++T Sbjct: 204 NGSKMWITNSMEAGVFIVFANLNPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIKASSTC 263 Query: 288 ELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 L F + G LLG+ + G + + +I I +++ G + A+ + R Sbjct: 264 VLNFDDVVIPKGNLLGEEGQGYKYAIGLLNEGRIGIAAQMTGLAL-GAWENAAKYVWNDR 322 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R+ G ++ + M+ IA +IAAA AL + A + + ++AA A++ Sbjct: 323 RQF--GQLVGEFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL----- 375 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + LL+K Sbjct: 376 --YASQVAGRVAGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 433 >gi|327479105|gb|AEA82415.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 393 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 44/275 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228 + + PK+ S EY IG GLTE G+D ++ ++ +K+ DG Y L Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164 Query: 229 SGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 SG K W +SP++D F++ A+ + G + F++ + E GL + K+G R++ T Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDAGEIRGFVLEKGWE-----GLSAPTIHGKVGLRASIT 219 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 E+ N F D+ GP L+SA +S + AE A Y Sbjct: 220 GEIVMDNVFCPEENAFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G L ++++ +AD+ +I A RL DE + E + Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 I K C A V A + +GG+G +E +ARH Sbjct: 327 IMKRNSCGKALDVARMARDMMGGNGISDEFGVARH 361 >gi|228915131|ref|ZP_04078728.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844560|gb|EEM89614.1| Butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 381 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 37/278 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 PM GLTE G+D A T + + Y +SG K ++++ I++ V Sbjct: 113 PMASGKTLGAFGLTEPNAGSD-AGGTQTKAILDEDEYVISGEKCWITNAEYANTIIVTAV 171 Query: 250 EG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 G R+ F+VP E GL +K+G R++ T E+ +L Sbjct: 172 NGVEENGRKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENIL 226 Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 GD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 227 GDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKSISNFQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 281 AIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIAN 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A++ GG GY+ E + RH R+ A + +G G + + Sbjct: 334 QAVQIHGGYGYMREYEVERHIRD--AKLLEIGEGTSEI 369 >gi|62988280|ref|NP_001017933.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Bos taurus] gi|75060971|sp|Q5EAD4|ACDSB_BOVIN RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SBCAD; AltName: Full=2-methyl branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD; AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase; Short=2-methylbutyryl-CoA dehydrogenase; Flags: Precursor gi|59857635|gb|AAX08652.1| acyl-Coenzyme A dehydrogenase, short/branched chain precursor [Bos taurus] gi|113911860|gb|AAI22699.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Bos taurus] gi|296472531|gb|DAA14646.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Bos taurus] Length = 432 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T A + ++E G+D A+ ++ K D Y ++G K W S+ ++ F+++A Sbjct: 164 PKLATEKASSICISETGAGSDSFAMKTRADKKGD-YYIINGSKMWISSAEIAGLFVVMAN 222 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + G CFLV DG GL + +NK+G R+++T + F N + N Sbjct: 223 ADFSAGYKGITCFLV-----DGDTEGLHVGKPENKLGIRASSTCPVTFENV---KVPKTN 274 Query: 304 VSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 + K I L+ + ++ + +A+ I Y + R G + D ++ Sbjct: 275 ILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKERKQFGRRVFDFQGLQH 334 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A +A + AA L++ A + + +EA+ A KY ++A + ++ +E Sbjct: 335 QVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMA-------KYHASELAGLITSKCIE 387 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY + + +++R++ +I G+ N Sbjct: 388 WMGGVGYTKSYPVEKYFRDAKIGTIYEGTSN 418 >gi|17548908|ref|NP_522248.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] gi|17431158|emb|CAD17838.1| putative acyl-coa dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 385 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252 I LTE G+D AA+ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAAALQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGAEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISAFIVP-----ADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVPAANIIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YAR R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYARERRQFGQPIADFQLIQAMLADSQT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A K +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGKPDHEVGMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 + E + R YR+ Sbjct: 349 VAEYKVERFYRD 360 >gi|296449145|ref|ZP_06890932.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] gi|296261964|gb|EFH08772.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] Length = 381 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + + + D Y L+G K F+++ P D I++A + G Sbjct: 125 FGLTEPGAGSDAAGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311 + + +G ++K+G R T +L F N LLG ++ G +E Sbjct: 184 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 243 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I + A +++ + +L EA+ Y ++R G + + IAD+ + AA Sbjct: 244 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A D ++E+A A KY+ ++A V +A++ GG G+I++ I Sbjct: 300 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 352 Query: 432 RHYRESPANSILLGS 446 R YR++ SI G+ Sbjct: 353 RMYRDARIVSIYEGT 367 >gi|162457525|ref|YP_001619892.1| isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] gi|161168107|emb|CAN99412.1| Isovaleryl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 387 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 38/272 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S E+ IG +G+TE GTD+ + + ++ D Y L G K Sbjct: 120 YLPKVLSGEW--------------IGAMGMTEPTSGTDVLGMKTFARRDGD-RYILKGRK 164 Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 ++ +P + F++ A +EGRV F+V R G P G K+G R + EL F Sbjct: 165 ALITNAPEAQIFLVYATIEGRVTTFVVER----GFP-GFSTDEKTPKMGMRGSTMSELLF 219 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 + L G + +M + L+ ++++ M + +A+ I YA R G Sbjct: 220 DDCVVPAWNVLGQEGGGIRNMMRNLELER--LTLAAMSLGIADRCLEIMIQYAGERRSFG 277 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARIMAPITKYWCC 405 + + ++R IA+ AA AL + +A N E ++R A AP+ K Sbjct: 278 KPIAEHGQIQRYIAESYAKTEAARALIYAVARNVSPERRNRLGTDAAKLFAAPVGK---- 333 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 V AM+ +GG GY E + R +R++ Sbjct: 334 ----EVADNAMQVLGGWGYCTEYKVERFFRDA 361 >gi|56476574|ref|YP_158163.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56312617|emb|CAI07262.1| putative acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 377 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 22/261 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFLV 258 +TE G+D+ +I + ++ DG Y ++G K W S+P++D F + A+ E ++ FLV Sbjct: 125 MTEPNAGSDLESIATTATRV-DGGYVINGQKTWITSAPVADFFTVFARAGDEKKLTIFLV 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKIL- 315 E P G+ R +K+G + T E+ F F L+ G E K L Sbjct: 184 ----EKDVP-GITVGREIHKMGVWALPTSEVAFDGCFVPDSHRLSKEEGDGEGHLKKTLA 238 Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I + + M++ R +L A+ YA R G + ++ +AD+A + AAT L Sbjct: 239 EIRIITGAMALGVARAALFAAVRYAGERKQFGKPINRFQAIQLKLADMATGLEAATTLVH 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D + +EAA A++ A T C A V+A GY E + R+ Sbjct: 299 RAAWLCDMKRPHHKEAAMAKLFATETAAGICDDAARVLAS-------YGYAMEYPVQRYL 351 Query: 435 RESPANSILLGSGNAMVLDVL 455 R+ L+G G + +L ++ Sbjct: 352 RD--VRFTLIGGGTSEILKLV 370 >gi|15595703|ref|NP_249197.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107099492|ref|ZP_01363410.1| hypothetical protein PaerPA_01000504 [Pseudomonas aeruginosa PACS2] gi|116054232|ref|YP_788676.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|254237269|ref|ZP_04930592.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719] gi|254243599|ref|ZP_04936921.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192] gi|296387005|ref|ZP_06876504.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas aeruginosa PAb1] gi|313111863|ref|ZP_07797655.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|9946370|gb|AAG03895.1|AE004487_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|115589453|gb|ABJ15468.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169200|gb|EAZ54711.1| hypothetical protein PACG_03333 [Pseudomonas aeruginosa C3719] gi|126196977|gb|EAZ61040.1| hypothetical protein PA2G_04422 [Pseudomonas aeruginosa 2192] gi|310884157|gb|EFQ42751.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 601 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ D I+LA++ +G Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L + G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V I YAR R +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407 ++R + + A+ + A D +S+ EE A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLG 453 >gi|323524855|ref|YP_004227008.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323381857|gb|ADX53948.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 396 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEENGKDTIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AEA + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E IARH Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364 >gi|254503377|ref|ZP_05115528.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222439448|gb|EEE46127.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 428 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y L+G K W +SP++D F++ A+ E G + Sbjct: 170 FGLTEPDAGSDPAGMRTRAEKI-DGGYKLTGSKMWISNSPIADVFVVWAKSEAHDGA-IR 227 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ N G LL +++ GP Sbjct: 228 GFVLEKGM-KGLSAPKVGGKLSLRASITGEIVMDNVEVGEGALLPNVSGLKGP------F 280 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 281 GCLNRARYGISWGAMGAAEDCWTRARQYGLDREQFGRPLAQTQLFQKKLADMQTEIALGL 340 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + R+ FD + E M I K C A + +A + GG+G EE + Sbjct: 341 QAALRVGQLFDAGQMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEEYHV 393 Query: 431 ARH 433 RH Sbjct: 394 MRH 396 >gi|209517637|ref|ZP_03266475.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209501933|gb|EEA01951.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 396 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 18/240 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ DG Y LSG K W +SP++D F++ A++E + Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITNSPIADVFVVWAKLEEDGNDNIR 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +LE G GL + K+G R++ T E+ F + + N+ G L Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPEENIMPGVSGLRGPFTCL 251 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATALS 373 +SA ++ + AEA + R++V G L ++++ +AD+ +I Sbjct: 252 NSARYGIAWGALGAAEACWHISRQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL DE + E + I K C A + A + +GG+G +E +ARH Sbjct: 312 LRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARH 364 >gi|225713624|gb|ACO12658.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Lepeophtheirus salmonis] Length = 408 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 28/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 GLTE G+D A ++ + DG Y L+G K W ++P + ++ A + Sbjct: 146 FGLTEPGNGSDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAHCMVVFATTNIKLKHKG 205 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+VP+ S G+ + ++K+G R ++T + + ++ NV G Sbjct: 206 ITAFIVPK-----SIPGVSTGKKEDKLGIRGSSTSNVILEDA---VVPKENVLGGLGMGF 257 Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + V+ +A+ A+ YA +R G + +++ IAD+A+ + Sbjct: 258 KIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRQSFGVPIAKLQMIQSKIADMAMRV 317 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L +R A + D ++EAA ++ A T W V ++++ +GG G++ Sbjct: 318 EASRLLLYRAAAAKDAGMPYTKEAAMTKLFASETATW-------VAHQSIQVLGGMGFVT 370 Query: 427 ERSIARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 371 DMPSERNYRDARITEIYEGT 390 >gi|148260554|ref|YP_001234681.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|146402235|gb|ABQ30762.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5] Length = 386 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 22/247 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A++T++ ++ + Y L+G K +++ +P + F ++A+ G + F Sbjct: 124 LTEPDAGSDAASLTTRAERDGED-YILNGAKRYITNAPRAGGFTLMARTGGPGASGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKIL 315 +VP GL R K+G R T ++ N + N+ G P + + Sbjct: 183 IVP-----ADTPGLKLGRPDRKMGQRGTKTCDVILENA---RVPAANIIGGVPGQGFRTA 234 Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +S + +A EAI YAR R G + + +++ +AD +++A Sbjct: 235 MKVLDRGRLHISAVACGMARRLQDEAIAYARERRQFGRPIGEFQLVQAMLADSEAELSAG 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL +A ++D+ ++ A + A K +C +M V A++ GG+GY+ E Sbjct: 295 WALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTEMVGRVADRAVQVHGGAGYMAEYK 353 Query: 430 IARHYRE 436 + R YR+ Sbjct: 354 VERFYRD 360 >gi|325274718|ref|ZP_08140761.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324100147|gb|EGB97950.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 375 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 28/272 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP+ ++ G LTE + G+D +++ ++ + D Y L+G K F++S + +++ Sbjct: 110 APLASGAMLGGFALTEPQAGSDASSLKTRARLDGDH-YVLNGSKQFITSGQNAGVVIVFA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V G+ G F+VP SP G R+++K+G ++ T ++ F N + L Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 E KI L L+ + ++ V +A A YA R G L++ + Sbjct: 224 GAEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVAREYANERQSFGKALVEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D + A + A + K + +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSHAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|312793411|ref|YP_004026334.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180551|gb|ADQ40721.1| acyl-CoA dehydrogenase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 381 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 34/285 (11%) Query: 178 IFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 ++ +E P + K + LTE G+D+++I + +K D Y L+G K W Sbjct: 99 LYGKEEQKKKYLPKIAKGELIAAFALTEADAGSDVSSIKTTAEKKGD-YYILNGSKHWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + +D +++ A + G PR ++E G C ++ ++K+G R+++T EL Sbjct: 158 NGGEADVYVVFAVTDKSKG----PRGISAFIVEKGYEGFYCGKK-EDKMGIRASSTTELI 212 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR 342 F + LLG TG + MK D V+ M V +A+ A+ YA+ R Sbjct: 213 FEDCKVPKENLLG--REGTGFIVAMKT---FDRTRPGVAAMAVGIAQGAYEHAVRYAKER 267 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITK 401 G L ++ +AD+ ++I AA A+ + D AK S+E++ ++ A Sbjct: 268 VQFGQPLSSFQAIQHMLADMYINIEAARAMLYSTCRMIDSGAKDFSKESSACKVFAS--- 324 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V + ++ +GG+GY+++ + + R++ I G+ Sbjct: 325 ----DVAMKVTTDVVQIMGGNGYVKDYPVEKMMRDAKVTQIFEGA 365 >gi|229017657|ref|ZP_04174549.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] gi|228743640|gb|EEL93748.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] Length = 615 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 26/281 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + L+G K W ++ M+D +++ A+ + F+V Sbjct: 194 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 253 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 254 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 304 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 305 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 364 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 365 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 424 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 + R YR++ + I G+ L V +L K FEQ+ Sbjct: 425 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---FEQI 462 >gi|148380150|ref|YP_001254691.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932288|ref|YP_001384448.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 19397] gi|153934592|ref|YP_001387985.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. Hall] gi|148289634|emb|CAL83737.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium botulinum A str. ATCC 3502] gi|152928332|gb|ABS33832.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930506|gb|ABS36005.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A str. Hall] Length = 377 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|170724225|ref|YP_001751913.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169762228|gb|ACA75544.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 393 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361 >gi|330874800|gb|EGH08949.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 601 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|260777485|ref|ZP_05886379.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] gi|260607151|gb|EEX33425.1| branched-chain acyl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] Length = 384 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 43/305 (14%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 M+A T +++ PK+ + ++ LG LTE G+D A++T+ Sbjct: 96 MIASFATEEAKEEFCPKLITGDW----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCY 272 +K D Y ++G K F+S +++ G + F++P G+ Y Sbjct: 140 AKKQGDE-YIINGGKTFISGAGDTEVLVVMARTGDSSAKGISAFVIP-----ADAEGISY 193 Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R + K+G S T + F N +LLG G MK L ++ A S+ Sbjct: 194 GRKEPKMGWNSQPTRAITFDNVVVPEKYLLG--KEGEGFTFAMKGLDGGRINIATCSIGT 251 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + +L E + Y + R G L ++ +AD+ ++ AA + A+ D Sbjct: 252 AQQALNEVMQYVKERKQFGKELAQFQGLQFRLADMVTELVAARQMVRLAASKLD--NQDP 309 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E AY + K + + + +A++ GG GYI+E + RH+R+ + IL G+ Sbjct: 310 EATAYC----AMAKRFATDVGFKICDQALQLYGGYGYIKEYPMERHFRDVRVHQILEGTN 365 Query: 448 NAMVL 452 M L Sbjct: 366 EIMRL 370 >gi|255654422|ref|ZP_05399831.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-23m63] gi|296880876|ref|ZP_06904824.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] gi|296428163|gb|EFH14062.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] Length = 377 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + + + D Y L+G K F+++ P D I++A + G Sbjct: 121 FGLTEPGAGSDAAGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311 + + +G ++K+G R T +L F N LLG ++ G +E Sbjct: 180 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I + A +++ + +L EA+ Y ++R G + + IAD+ + AA Sbjct: 240 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A D ++E+A A KY+ ++A V +A++ GG G+I++ I Sbjct: 296 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 348 Query: 432 RHYRESPANSILLGS 446 R YR++ SI G+ Sbjct: 349 RMYRDARIVSIYEGT 363 >gi|183220535|ref|YP_001838531.1| putative acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910645|ref|YP_001962200.1| isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775321|gb|ABZ93622.1| Isovaleryl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778957|gb|ABZ97255.1| Putative acyl-CoA dehydrogenase, short-chain specific (SCAD; Butyryl-CoA dehydrogenase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 394 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 21/270 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG---RVG 254 G+G+TE GTD+ +T+Q K D Y ++G K ++++ + F++ +++ ++ Sbjct: 134 GMGMTEPGAGTDVLGMTTQAVKKGDR-YIINGVKQYITNGSVGQVFVLYTKLDKNAKKMT 192 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V + S G + + K+G RS+ T +L F + L V G + M Sbjct: 193 SFVV-----ESSYKGFSVGKKEEKMGMRSSPTTQLVFEDMEVPEENLLGVENGAITHMMR 247 Query: 315 LIYLDSAIMSVSGM----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + ++ ++ + R + R R G L++ ++R IA+ D AA Sbjct: 248 NLEIERVTLAAQSLGIARRCVDIMCDYTVRHREAFGKKLMEFGQIQRLIAESYADYQAAR 307 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL +++A+ S AA A+++A +MA V A++ +GG GY E + Sbjct: 308 ALVYQVASELGPDVRNSLGAASAKLVA-------TQMAERVSRNAIQVLGGYGYCREYPV 360 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R +R++ SI G+ AM ++ + L+K Sbjct: 361 ERLHRDAILLSIGGGTNEAMQKNIASDLKK 390 >gi|15964628|ref|NP_384981.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] gi|307304205|ref|ZP_07583957.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|15073806|emb|CAC45447.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306902673|gb|EFN33266.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 593 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 101/448 (22%), Positives = 186/448 (41%), Gaps = 76/448 (16%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDG 114 LGE ++ E R A+ L G G+R V+ W L R I G Sbjct: 31 LGEDLVDAILGEAGRFASEEVAPL---GDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGG 87 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + +F + H + A + + ++P++T ++ AL T + Sbjct: 88 WNGLTAPEAFGG--QNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKA 145 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S E+ T + LTE G+D+ + ++ ++ DG Y + G K Sbjct: 146 TFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQK 192 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRL 275 F++ +D + L A +G + FLVP+ L EDGS N + L Sbjct: 193 IFITWGEHDFTDNIVHLVLARLPDAPAGTKG-ISLFLVPKFLVNEDGSLGERNDVFCHSL 251 Query: 276 KNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 ++K+G + T + + + G+L+G+ N + M +++A ++V Sbjct: 252 EHKLGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTM-----MNNARLAVGM 306 Query: 328 MRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALS 373 V++AEA I YA+ R SG G+ +I+ P + R + + + A++ Sbjct: 307 QGVAIAEAATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIA 366 Query: 374 FRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A++ D A + E A + ++ PI K + V + ++ GG G+IEE Sbjct: 367 YACAHAVDMAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEET 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456 AR+ R++ I G+ +D++ Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVT 454 >gi|262376431|ref|ZP_06069660.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308570|gb|EEY89704.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 375 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDH-YILNGAKQFITSGHNAGMIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FG 296 G+ G FLVPR G R++ K+G ++ T ++ ++ G Sbjct: 170 TDPAAGKKGMSAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRIHESLRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA R G + +Q + Sbjct: 225 AEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATAYAHDRVAFGKPIFEQQAIS 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + +S EA+ A++ A +MA V ++A+ Sbjct: 281 FRLASMATEIEAARQLVHFAARKKEAGESCLTEASMAKLFA-------SEMAERVCSKAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+++ I R YR++ I G+ + Sbjct: 334 QIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|241666659|ref|YP_002984743.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862116|gb|ACS59781.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 395 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 30/268 (11%) Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234 + F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W Sbjct: 114 ETFGSEAQKLKYLPKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWI 172 Query: 235 LSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++P++D F++ A+ E G + F +LE G GL + K+G R++ T E+ Sbjct: 173 SNAPIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDG 227 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F LL D+ GP L+SA ++ + AE A Y R Sbjct: 228 VFVPEENLLPDVTGLKGP------FTCLNSARFGIAWGALGAAEDCYARARQYTLERKQF 281 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+A +I+ RL +E E + I K C Sbjct: 282 GRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSC 334 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E IARH Sbjct: 335 GKALEIARAARDMLGGNGISDEFGIARH 362 >gi|257094018|ref|YP_003167659.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046542|gb|ACV35730.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 607 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 41/294 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ +T++ + DG Y ++G K F+S+ D I+LA++ G Sbjct: 165 LTEAQCGTDLGQVTTRAESRPDGSYAITGTKMFISAGEHDLAANIVHIVLARLSGAPAGT 224 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L E GSP N + +++K+G R++ T L F G L+ + N Sbjct: 225 RGLSLFVVPKFLPNEGGSPGQRNAVNCGAIEHKMGIRASPTAVLNFDAAVGQLIFEPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352 + L A+ ++ S A+ YAR R V+ ++ Sbjct: 285 LEAMFTFMNTARLGIALQGIAHAEASFQGALAYARERRSMRALSGKKDPDSVADALIWHA 344 Query: 353 PV-----MKRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA---PITKY 402 V ++AIA+ A+ AAA +E R+ +A Y ++ PI K Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYAAAQTADIMFNAVLEE--DRATQAEYDNLLGFYTPILKG 402 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + ++ M+ GG GYI E + + R++ ++ G+ LD+L Sbjct: 403 FLTELGLEAANLGMQVFGGHGYIHEHGMEQMVRDARIATLYEGTTGIQALDLLG 456 >gi|226225961|ref|YP_002760067.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] gi|226089152|dbj|BAH37597.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] Length = 385 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 19/263 (7%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251 TS +G L+E G+D + ++ + ++G + L+G K W + ++ F++ A + Sbjct: 122 TSNTVGAYALSEPGSGSDAFGLATRADR-AEGGWTLNGSKAWITNGGEAEVFVVFANTKP 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 G + + + G + ++K+G R+++T L F N F + D NV + Sbjct: 181 EAGYKGITAFIVERDAKGFSVGKKEDKLGIRASSTTSLHFENVF---VSDANVLGEVGQG 237 Query: 312 MKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 KI I L+ + + + +A+ A Y + R G L D ++ +A A + Sbjct: 238 YKIAIETLNEGRIGIGAQMIGVAQGALSAATAYLKERKQFGKALADFQGIQFQVAQAATE 297 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA + + A D + + E A A++ + +M V + +E GG GY Sbjct: 298 LEAARLMVYNAARLKDAGQDIAREGAMAKL-------YASQMCERVTSLCVELFGGYGYT 350 Query: 426 EERSIARHYRESPANSILLGSGN 448 E + + YR++ +I G+ N Sbjct: 351 REYPVEKFYRDAKIGAIYEGTSN 373 >gi|182439592|ref|YP_001827311.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468108|dbj|BAG22628.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 383 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 49/292 (16%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + W P++ S E AIG GLTE G+D + ++ ++ G Y ++ Sbjct: 107 KRTWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLATRAER-DGGDYVVN 151 Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 G K F+++ +D ++ A+ G FLVP GL + + K+G R Sbjct: 152 GTKMFITNGTWADVVLLFARTNDAPGHRGVSAFLVPT-----DTPGLTRRTVHGKLGLRG 206 Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA---- 335 AT EL G LLG + I + L MSV+ V +A+A Sbjct: 207 QATAELVLQGVRVPAGALLGPEG------KGFSIAMSALAKGRMSVAAGCVGIAQAALDA 260 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + YA R G + +++ ++DIA+D+ AA L++R+A+ D + + A+ A+ Sbjct: 261 AVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLIDRGQEFATAASKAK 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A C A++ GG GYI+E + + R++ ++ G+ Sbjct: 321 LYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVMTLYEGT 365 >gi|315652762|ref|ZP_07905736.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986] gi|315484964|gb|EFU75372.1| butyryl-CoA dehydrogenase [Eubacterium saburreum DSM 3986] Length = 382 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + + LTE G+D A +T+ K D Y L+G K F++ +P+SD ++ A+ Sbjct: 115 PVVRGEKKLSFALTEPGAGSDAAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAK 173 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301 + G V + D G+ + ++K+G AT V + SN G Sbjct: 174 TDMTKGTRGVSAFIIDMKQEGVSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKG 233 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 N++ + LD+ + V+ + +AE A YA+ R G + + Sbjct: 234 FNLA---------MATLDTGRLGVASQAIGVAEGCLEEACKYAKERKQFGKNIGAFQAIG 284 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 IAD+A + AA L++R A D + + A + K + ++ + A+A+ Sbjct: 285 FTIADMATKLEAAKQLTYRAAYMMDTKQDSG-------MAASMAKLYATEVCNEIAAKAV 337 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI++ + R YR+ +I G+ Sbjct: 338 QIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367 >gi|170722619|ref|YP_001750307.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169760622|gb|ACA73938.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 375 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 30/273 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP+ S+ LTE + G+D +++ ++ + D Y L+G K F++S + +++ Sbjct: 110 APLASGSMIGAFALTEPQAGSDASSLKTRARLDGD-YYVLNGSKQFITSGQNAGVVIVFA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V G+ G F+VP L G R+++K+G ++ T ++ F N L Sbjct: 169 VTDPEAGKRGISAFIVPTDLP-----GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G+ ++ +E +I I A SV R + A YA+ R G LI+ + Sbjct: 224 GEEGQGYKIALANLEGGRIGI----ASQSVGMARAAFEVARDYAKERCSFGKPLIEHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A IA A + A D + A + A + K + +MA V ++A Sbjct: 280 AFRLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG GY+ + + R YR+ I G+ + Sbjct: 333 LQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|15789868|ref|NP_279692.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|10580266|gb|AAG19172.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] Length = 397 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 29/283 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP+ + L+E G+D+ A+ + Q+ D Y +SG K W + ++D + A Sbjct: 129 APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDA-YVISGEKLWISNGSVADTVTVFA 187 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 + + G F+V R ED +G ++K+G++ T EL F + LL Sbjct: 188 KTDPDAGHRGISSFIV-RPAED---DGFIVAGTEDKLGDKGCPTAELRFDDMRVPADRLL 243 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G+ + + +I I A SV R +L +A YA+ R G + D + Sbjct: 244 GEEGDGFKHALETLNGGRITI----AARSVGLARAALDDAREYAQDRDQFGQAISDFQTI 299 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+ + AA L + A+ +S +EAA A++ + +++ V E Sbjct: 300 QHKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQAKL-------YASEISREVANEG 352 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 ++ GG GY ++ R+YR++ N I G+ + + N L Sbjct: 353 IQIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 395 >gi|326780257|ref|ZP_08239522.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|326660590|gb|EGE45436.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 383 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 49/292 (16%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + W P++ S E AIG GLTE G+D + ++ ++ G Y ++ Sbjct: 107 KRTWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLATRAER-DGGDYVVN 151 Query: 230 GHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 G K F+++ +D ++ A+ G FLVP GL + + K+G R Sbjct: 152 GTKMFITNGTWADVVLLFARTNDAPGHRGVSAFLVPT-----DTPGLTRRTVHGKLGLRG 206 Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA---- 335 AT EL G LLG + I + L MSV+ V +A+A Sbjct: 207 QATAELVLQGVRVPAGALLGPEG------KGFSIAMSALAKGRMSVAAGCVGIAQAALDA 260 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + YA R G + +++ ++DIA+D+ AA L++R+A+ D + + A+ A+ Sbjct: 261 AVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLIDRGQEFATAASKAK 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A C A++ GG GYI+E + + R++ ++ G+ Sbjct: 321 LYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVMTLYEGT 365 >gi|163748947|ref|ZP_02156198.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] gi|161331323|gb|EDQ02211.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] Length = 585 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 34/288 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ + DG Y ++G K F+++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRGIRTKAVPLDDGSYSITGSKIFITAGDHDLTENVIHLVLAKLPDSNG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ D G N + +++K+G ++++T + + + G+L+G N G Sbjct: 224 ISLFLVPKIKVDDSGALGESNHVTVGSIEHKMGLKASSTCVMNYDDAQGYLIGRAN--RG 281 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRH---VSGGI--------LIDQP 353 V ++ Y AI + G+ S A A YA+ R +GG +I Sbjct: 282 LVCMFTMMNYERLAI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGATSDPIIVHG 340 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMA 408 ++R + +I + A ALS D E +++++ + Y ++ P+ K + Sbjct: 341 DVRRMLLNIRVLTEAGRALSVLTGQQLDIAKYGEGEAQAKASRYVGLLTPVAKAFLSDRG 400 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + GG GYI E I + R++ I G+ +D L Sbjct: 401 LDAAITAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLG 448 >gi|261364332|ref|ZP_05977215.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996] gi|288567591|gb|EFC89151.1| acyl-CoA dehydrogenase family protein [Neisseria mucosa ATCC 25996] Length = 589 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 47/314 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247 + L+E + G+D+ I ++ +G Y LSG K F++ M++ + L Sbjct: 161 MNLSEPQAGSDLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAP 220 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G V F+VP+ L + G NG+ +++K+G ++ T +EF N G+L+G Sbjct: 221 GVQG-VSMFIVPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRA 279 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQP 353 + M L+ I + + A+ YA+ R V G +I P Sbjct: 280 GKGLAYMFTMMKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHP 338 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKM 407 ++R + +AA AL R A D A + R E + PI K W Sbjct: 339 DVRRMLLIQKATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWPTDN 398 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------- 454 + A++ GG+GY+EE +A++ R+ I G+ D+ Sbjct: 399 GVVLTNLAVQIYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKNGALP 458 Query: 455 LNLLEKGTNLFEQL 468 L LL +G +L ++L Sbjct: 459 LKLLAEGKDLADKL 472 >gi|218889247|ref|YP_002438111.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218769470|emb|CAW25230.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 601 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ D I+LA++ +G Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L + G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V I YAR R +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407 ++R + + A+ + A D +S+ EE A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLG 453 >gi|66047905|ref|YP_237746.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] gi|63258612|gb|AAY39708.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] Length = 601 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|289674347|ref|ZP_06495237.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. syringae FF5] gi|330979901|gb|EGH78201.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 601 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQVYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|256026640|ref|ZP_05440474.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp. D11] gi|289764636|ref|ZP_06524014.1| acyl-COA dehydrogenase [Fusobacterium sp. D11] gi|289716191|gb|EFD80203.1| acyl-COA dehydrogenase [Fusobacterium sp. D11] Length = 637 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F++ + +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A L + A E K E MA K + +A V+ +A++ GG+ Sbjct: 289 ATKIRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDAVQIFGGA 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|242240504|ref|YP_002988685.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703] gi|242132561|gb|ACS86863.1| acyl-CoA dehydrogenase domain protein [Dickeya dadantii Ech703] Length = 397 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 21/268 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 L+E + GTDIAA+T + Q+ G + L+G K W ++ I++A+ G Sbjct: 133 AFALSELQAGTDIAALTLEAQRCEGG-WLLNGDKAWIALGDIASDIIVIARTGEGPGPLG 191 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + + D G+ + L + + RS + L F N + N+ P + I L Sbjct: 192 LSAFIVDAVAGGVSARPL-DAVAPRSWS--HLHFDNV---RVSPENLLGQPGQGFIIALD 245 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD M+V+ + A A+ +A +R + G L+D + + +A + + ++AA+ Sbjct: 246 ILDRFRMTVASAAIGFARRAADIALRHAAQRKIYRGRLLDLQLTQATLAKMEVSLSAASL 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ R A D+ + + E+A A KY+ C+ A ++ A++ +G +G + + Sbjct: 306 LTARAAWQHDDDRPFARESAAA-------KYFACEQACKIVDAALQLLGAAGVVAGSQLE 358 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLE 459 R YR+ I G+ A+++++ + L+ Sbjct: 359 RLYRQIRPLRIYEGASEALLMNIASALD 386 >gi|182678727|ref|YP_001832873.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634610|gb|ACB95384.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 594 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 41/292 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQ-------V 249 LTE GTD+ ++ DG Y ++G K F+S+ D ++LA+ + Sbjct: 164 LTEPHCGTDLGLSRTKAVPAEDGTYRITGTKIFISAGEHDLTENILHLVLARLPDAPKGI 223 Query: 250 EGRVGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + FLVP+ +D G+ NG+ +++K+G +++AT + F G+L+G+ + Sbjct: 224 KG-ISLFLVPKFFVHDDNTLGARNGVSCGSIEHKMGIKASATCVINFDEATGWLVGEPHK 282 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP------- 353 + M L + + VS A+ YAR R ++G D+P Sbjct: 283 GMRAMFTMMNTERLAVGLQGLGIAEVSYQGAVAYARERLQGRSLTGAKYPDKPADPIIVH 342 Query: 354 -------VMKRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 + +RA A+ A I AA L R + +A R E + ++ P+ K Sbjct: 343 PDIRRMLLTQRAYAEGCRAFGIWAAKHLDLR---NHPDATVRQEAEEFVALVTPVVKALF 399 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + M+ GG GYI E + ++ R+ I G+ LD + Sbjct: 400 TDLGSEAANLGMQVFGGHGYIREHGMEQYARDVRIAQIYEGTNGVQALDFVG 451 >gi|152986723|ref|YP_001345944.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961881|gb|ABR83906.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 393 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228 + + PK+ S EY IG GLTE G+D ++ ++ +K+ DG Y L Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164 Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 SG K W +SP++D F++ A+ EG++ F++ + E GL + K+G R++ T Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 E+ N F ++ GP L+SA +S + AE A Y Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G L ++++ +AD+ +I A RL DE + E + Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 I K C A + A + +GG+G +E IARH Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361 >gi|21356377|ref|NP_650840.1| Arc42 [Drosophila melanogaster] gi|7300557|gb|AAF55709.1| Arc42 [Drosophila melanogaster] gi|21430902|gb|AAM51129.1| SD24551p [Drosophila melanogaster] Length = 405 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ + G + ++K+G R ++T +L F + ++ N+ P K Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D+ + ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|330824273|ref|YP_004387576.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329309645|gb|AEB84060.1| Long-chain-acyl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 381 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 35/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 + +TE GTD+ AI ++ ++ G Y + G K F+++ + + I++A+ G L Sbjct: 126 IAMTEPGCGTDLKAIGTRARRDGGG-YVIDGAKTFITNGFTCNLLIVVARTGGPGSRGLS 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303 +LE G RL KIG ++ T EL F FG L+G L Sbjct: 185 LIVLETEDLPGFRVGRLLEKIGLHASDTAELFFDGVRVPADQLLGGEEGQGFGQLMGQL- 243 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E M I A+ + + + ++L + YAR R V G L+D + +A++A Sbjct: 244 ----PYERMLI------AVPAAATIELALQLTLDYARERKVFGAPLLDMQNTRFKLAEVA 293 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + K +E AAY + K+WC + V+ E ++ GG G Sbjct: 294 TIAHVVRTFVNDCTQRLVDGKLDAE-AAY------MAKWWCTEQQCRVVDECLQLFGGYG 346 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ E IAR Y S I G+ M Sbjct: 347 YMTEYPIARLYAASRVQKIYGGANEVM 373 >gi|298369590|ref|ZP_06980907.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282147|gb|EFI23635.1| acyl-CoA dehydrogenase family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 595 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 49/346 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL + + + PK+ S E+ T + L+E + G+ Sbjct: 124 LMPMLTLGAVDALFKHGSEEQKQTYLPKMCSGEWAGT-------------MNLSEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFL 257 D+ I ++ +G Y LSG K F++ M++ + L V+G V F+ Sbjct: 171 DLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAPGVQG-VSMFI 229 Query: 258 VPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L + G NG+ +++K+G ++ T +EF N G+L+G + M Sbjct: 230 VPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRAGKGLAYMFTM 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIA 363 L+ I + + A+ YA+ R V G +I P ++R + Sbjct: 290 MKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHPDVRRMLLIQK 348 Query: 364 LDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AA AL R A D A + R E + PI K W + A++ Sbjct: 349 ATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWLTDNGVVLTNLAVQ 408 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 GG+GY+EE +A++ R+ I G+ D+ G N Sbjct: 409 IYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKN 454 >gi|241203347|ref|YP_002974443.1| acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857237|gb|ACS54904.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 592 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 99/443 (22%), Positives = 184/443 (41%), Gaps = 67/443 (15%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L G G D +V W L R I G + Sbjct: 31 LGEDLVDAILAEAGRFATEEVAPLADIGDRQGARLIDGEVRLPDGWRDLYRHWIAGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175 +F + H + A L + ++P++T ++ A+ T + + + Sbjct: 91 LTAPEAFGG--QALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKDTYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE G+D+ + ++ ++ DG Y L G K F+ Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DGS N L L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + + + G+L+G+ N + M +++A ++V V+ Sbjct: 256 GIHGSPTCTMIYGDGKFGSEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310 Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377 +AEA + YAR R S G+ +++ P + R + + A A+S+ A Sbjct: 311 IAEAATQKALAYARERTQGRAPGSGSAGMSPIVEHPDVARMLLTMKALTQGARAISYVCA 370 Query: 378 NSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++ D + + + + A ++ PI K + V + ++ GG G+IEE AR+ Sbjct: 371 HAIDMSHRAGDSSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARY 430 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ I G+ +D++ Sbjct: 431 LRDARIAPIYEGTNGIQAIDLVT 453 >gi|289741097|gb|ADD19296.1| mitochondrial short-chain specific acyl-CoA dehydrogenase precursor [Glossina morsitans morsitans] Length = 407 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A ++ D Y L+G K W ++ A I+ A + + + Sbjct: 147 FALSEPGNGSDAGAASTTASDKGDH-YLLNGTKAWITNAFEGGAAIVFATTDKSLKHKGI 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + NG + ++K+G R+++T +L F + ++ N+ P KI + Sbjct: 206 SAFIVTKGINGFSLGKKEDKLGIRASSTCQLIFEDC---IIPKENMLGQPGYGFKIAMKT 262 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + +A+A + YA++R G + ++ IAD+AL I +A L Sbjct: 263 LDAGRIGIASQALGIAQASLELAVDYAQKRTAFGKPIAKLQAIQGKIADMALKIESARLL 322 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D +S ++EAA A++ A +C + ++ +GG GY+ + + R Sbjct: 323 TWRSAWLKDNNQSYTKEAAMAKLSASEAATFCSH-------QCIQILGGMGYVSDMAAER 375 Query: 433 HYRESPANSILLGS 446 +YR++ I G+ Sbjct: 376 YYRDARITEIYEGT 389 >gi|114762746|ref|ZP_01442180.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114544656|gb|EAU47662.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601] Length = 384 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 47/292 (16%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + + TP + W P + S + V LTE G+D I + ++ Sbjct: 95 IVMDGTPEQKEQWLPGVASGD-------------VVASFALTEPDNGSDAGGIRTSAKR- 140 Query: 222 SDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQR 274 G + ++G K ++++ + + F + A+ + V F+VP G+ + Sbjct: 141 DGGDFVINGTKRYITNAVRAGVFTVFARTDADKPGADGVSAFIVP-----ADTPGITVAK 195 Query: 275 LKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 K+G + T ++ F N + G N+ G MK+L D + V M V Sbjct: 196 PDRKLGQKGTKTSDVIFENVRVPESAIIGGPKNLHKGFRTAMKVL---DRGRIHVGAMAV 252 Query: 331 SLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAK 384 ++ A YA R G + + +++ IAD ++ AA AL A++FD E K Sbjct: 253 GQSQRMLDIATDYALERKQFGKPIGEHQLVQGLIADCQAELHAARALVRASADTFDREGK 312 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A I A TKY+C + A + A++ GG+GY+ E I R YR+ Sbjct: 313 --------AIIEASCTKYFCTEAAGRIADRALQIHGGAGYMAEYDIERLYRD 356 >gi|308474967|ref|XP_003099703.1| hypothetical protein CRE_23552 [Caenorhabditis remanei] gi|308266358|gb|EFP10311.1| hypothetical protein CRE_23552 [Caenorhabditis remanei] Length = 437 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 26/289 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T L+E G+D A+ + +K D Y ++G K W +S S+AF++ A Sbjct: 149 PRSVTEAVGSFALSEVSSGSDAFALKTTAKKDGDD-YIINGSKMWITNSEHSEAFLLFAN 207 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + G + + D G + ++K+G R+++T + F N +LG+ Sbjct: 208 ADPSQGYKGITAFMVDKDSKGFSIGKPEDKLGIRASSTCPIHFDNVRVPKSAILGEYG-- 265 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + K I L++ + + + LA+ I Y ++R G LID M+ I Sbjct: 266 ----KGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGERLIDFQGMQHQI 321 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPA 410 A I +I AA L + A + EAA A++ A ++ ++A Sbjct: 322 AQIRTEIEAARLLVYNAARMKENGLPFVREAAMAKLFASQVTTETESLRSQSTYFQVATN 381 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 ++ +E +GG G+ +E + ++YR+ +I G+ N + + L++ Sbjct: 382 TTSKCVEWLGGVGFTKEFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 430 >gi|253559432|gb|ACT32396.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens] Length = 592 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + + G+ N +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVNADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S A+ YAR R S +I P Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++R + + A S +A D AK + R ++ P+ K + + Sbjct: 346 DVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDPTTRKRAEDLVALLTPVAKAFLTDL 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466 + GG GYI E + R+ I G+ LD++ G+ F Sbjct: 406 GLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 465 Query: 467 QLFS 470 +LF+ Sbjct: 466 KLFA 469 >gi|237802421|ref|ZP_04590882.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025278|gb|EGI05334.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 601 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 83/402 (20%), Positives = 163/402 (40%), Gaps = 59/402 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFISAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R S +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKSADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFS 470 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L F ++ Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVH 472 Query: 471 TLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 Q G+ G + + ++ ++ G LT K+ +A+ Sbjct: 473 KFCQ--GNEGNEAVQEFVTPLAALNKEWGD---LTLKVGMAA 509 >gi|114566040|ref|YP_753194.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336975|gb|ABI67823.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 379 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 30/263 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254 LTE GTD+++ T+ K D Y L+G K F+++ ++D F++ A + G Sbjct: 123 FALTEPGAGTDVSSATTTAVKKGDK-YILNGTKTFITNAILADVFVVFAYTDRSAGAKGM 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVST 306 CFLVP+ +GL + +K+G R + T E+ F + +LG ++ Sbjct: 182 SCFLVPQ-----GSSGLNVGQHFDKMGVRGSQTSEVVFKDCVVAADCMLGKEGDGFKIAM 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ +I I A MS + L E+I Y++ R + Q ++ IA++A DI Sbjct: 237 SALDVGRIGI----AAMSTGITQGCLDESIKYSKERVQFKKPIASQQAIQWFIANMATDI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L A D+ K S A+ A++ +C + A +A++ GG G+++ Sbjct: 293 DAARFLYMNAAFIKDQGKPFSVAASKAKL-------FCSECAARHTTKAVQIQGGYGFMK 345 Query: 427 ERSIARHYRESPANSILLGSGNA 449 + R YR+ I G+ A Sbjct: 346 GAKVERFYRDVKLTEIGEGTSEA 368 >gi|269955842|ref|YP_003325631.1| acyl-CoA dehydrogenase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304523|gb|ACZ30073.1| acyl-CoA dehydrogenase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 388 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 34/277 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P T+ +G L +TE G+D+ A+ + +K+ DG Y ++G K F+SS +D + Sbjct: 118 PRMATAEVLGALAMTEPGAGSDLRAVKTTAKKV-DGGYVVNGAKTFISSGKTADVVVTFV 176 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----------- 295 + EG L+EDG G + + +K+G + T EL F++ F Sbjct: 177 KTGEGNRPDAFSLILVEDGMA-GFEHSKTLHKMGFPGHDTAELSFTDVFVPDENLIGGVE 235 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 GFL +N+ P+E + I ++ + +L + Y R G ++D Sbjct: 236 GRGFLQLMMNL---PLERLSI------GAVAAAVAEAALGWTLDYTTSREAFGQPIVDFQ 286 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +A++A + A A R + + + ++EAA K+WC + V+ Sbjct: 287 NTRFRLAEMATTVDAMWAFLDRAMTLYRQGELTADEAAK-------VKFWCTEREWEVLD 339 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + ++ GG GYI E IAR + ++ + I G+ M Sbjct: 340 QGVQLHGGYGYILEYPIARAFVDARVHRIYGGTNEVM 376 >gi|195569586|ref|XP_002102790.1| GD19319 [Drosophila simulans] gi|194198717|gb|EDX12293.1| GD19319 [Drosophila simulans] Length = 405 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ + G + ++K+G R ++T +L F + ++ N+ P K Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D+ + ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|19704756|ref|NP_604318.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328472|ref|ZP_06870992.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19715082|gb|AAL95617.1| ACYL-COA dehydrogenase, short-chain specific [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154378|gb|EFG95176.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 636 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F+++ +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGD-YYILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A V+ +A++ GGS Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDAVQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|328949605|ref|YP_004366940.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] gi|328449929|gb|AEB10830.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] Length = 393 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 34/277 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252 GLTE G+D A + ++ ++ +DG + L+G K F++ ++ +++ A+ EG+ Sbjct: 132 GLTEPGSGSDAAGMRTRAEETADG-WVLNGTKQFITQGSVAGVYVINARTDPAPEGKKHL 190 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + F+ P G+P GL R + K+G S+ T +L F + L D V Sbjct: 191 GISAFVFP----AGTP-GLKIGRKEEKLGLTSSDTAQLVFEDLK--LPKDALVGERGKGF 243 Query: 312 MKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +L LD A +SV R +L A YA R G + + + +A++A + Sbjct: 244 YDVLRVLDGGRIGIAALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEMATAL 303 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A D K + EAA A++ A C EA++ +GG GYI+ Sbjct: 304 EAARLLYLKAAELKDAGKPFTMEAAQAKLFASEVAVKACD-------EAIQILGGYGYIK 356 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 E + R++R+ A + +G G + +L ++ NLL + Sbjct: 357 EYPVERYWRD--ARLMRIGEGTSEILKIVISRNLLAR 391 >gi|257056459|ref|YP_003134291.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256586331|gb|ACU97464.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 373 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 31/292 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 ++W PK+ S EY +G + +TE G+D+ +IT++ + D Y ++G Sbjct: 103 REWLPKLASGEY--------------VGAIAMTEPGTGSDLQSITTRAVRDGDH-YVING 147 Query: 231 HKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+++ ++D ++ + + G + ++ + S G R+ +K+G R T EL Sbjct: 148 AKTFITNGALADLVVVAVKTDPDAGAKGISLIVVETSTPGFRRGRVLDKVGLRGQDTAEL 207 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344 F + LLGD G ++ M+ L L AI +V+GM ++ + I Y + R Sbjct: 208 FFDDVRVPVENLLGD-EEGQGFIQLMQQLPQERLIIAITAVAGMESAIEQTIAYTKERSA 266 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G +P++K + +A A + DE R A + K W Sbjct: 267 FG-----RPLIK--FQNTRYKLAEAATEAAVARAFLDECIERHLRGELDVQSAAMVKLWS 319 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + V+ E ++ GG GY+ E IAR + + + I G+ N ++ D+++ Sbjct: 320 TERVNKVVDECVQLFGGYGYMTEYPIARAWADVRVSRIFGGT-NEIMKDIIS 370 >gi|50086253|ref|YP_047763.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49532229|emb|CAG69941.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 607 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 129/293 (44%), Gaps = 39/293 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ + +DG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPQCGTDLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G +++AT L F G+L+G++N Sbjct: 225 RGISLFIVPKFIPTQDGGVGERNTVACGSIEHKMGIKASATAVLNFDGATGYLIGEINKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + + +A+ ++ +S A+ YA+ R V+ I+ Sbjct: 285 LHAMFTFMNTARIGTAVQGIAHAELSYQGALPYAKERMSMRALSGKKDPDKVADAIIHHA 344 Query: 353 PVMKRAIADIALD------IAAATALSFRLANSF---DEAKSRSEEAAYARIMAPITKYW 403 V + + A+ I A L+ ++A++ D+AK + PI K + Sbjct: 345 DVRRMLLTQKAIAEGGRAMIYHAAQLADKMADALIIGDQAKFEEYDDKLG-FYTPILKGF 403 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ + M+ GG GYI+E + + R++ ++ G+ LD++ Sbjct: 404 LTELGLEAASHGMQVFGGHGYIKEWGMEQILRDARIATLYEGTTGVQALDLIG 456 >gi|94314827|ref|YP_588036.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93358679|gb|ABF12767.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] Length = 385 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 37/283 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + + PKI S E + I LTE G+D A++ ++ D Y Sbjct: 102 TEEQKQTYLPKIASGE-------------LIISFALTEPNAGSDAASLQTRADLDGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 ++G K F++ +P + AF ++A+ G+ + F+VP G+ + K+G Sbjct: 148 VINGTKRFITNAPRAGAFTLMARTGGQGASGISSFIVP-----ADTPGISLGKPDKKMGQ 202 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----- 333 R T ++ N ++G + G MK+L D + +S + +A Sbjct: 203 RGTKTCDVVLENVRVPAANIIGGVP-GVGFKTAMKVL---DRGRLHISALACGMAHRLIT 258 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 +A+ YA+ R G + D +++ +AD ++ A ++ A +D AK + Sbjct: 259 DAVAYAKERKQFGKPIGDFQLIQGMLADSQAELYAGLSMVRDCAQRYD-AKPAGKSDPEV 317 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 ++A TK +C +M V A++ GG+GYI E R YR+ Sbjct: 318 SMLASCTKMFCTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360 >gi|15595644|ref|NP_249138.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107099431|ref|ZP_01363349.1| hypothetical protein PaerPA_01000443 [Pseudomonas aeruginosa PACS2] gi|116054176|ref|YP_788620.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889187|ref|YP_002438051.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254237322|ref|ZP_04930645.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719] gi|254243543|ref|ZP_04936865.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192] gi|296386944|ref|ZP_06876443.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|313111928|ref|ZP_07797717.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|9946306|gb|AAG03836.1|AE004482_3 glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|115589397|gb|ABJ15412.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169253|gb|EAZ54764.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa C3719] gi|126196921|gb|EAZ60984.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 2192] gi|218769410|emb|CAW25170.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|310884219|gb|EFQ42813.1| glutaryl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 393 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228 + + PK+ S EY IG GLTE G+D ++ ++ +K+ DG Y L Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164 Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 SG K W +SP++D F++ A+ EG++ F++ + E GL + K+G R++ T Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 E+ N F ++ GP L+SA +S + AE A Y Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G L ++++ +AD+ +I A RL DE + E + Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 I K C A + A + +GG+G +E IARH Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361 >gi|255524923|ref|ZP_05391871.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|255511401|gb|EET87693.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] Length = 634 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFGLTEENAGSD-AGGTETTAVLEGDYYILNGEKIFITNGGEADTYIIFAI 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + + +K+G RS+AT EL F+N + N+ Sbjct: 172 TTPNIGTHGISAFIVEKGWEGFSFGQHYDKMGIRSSATAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYENALEYSKERIQFGKPICRQQAIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + +A L + A + + + EAA A K + + ++ +A++ GGS Sbjct: 289 ATKLRSARLLIYSAAELKENHEHYNMEAAMA-------KQYASDVCLEIVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|255065462|ref|ZP_05317317.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256] gi|255050287|gb|EET45751.1| acyl-CoA dehydrogenase family protein [Neisseria sicca ATCC 29256] Length = 589 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 34/296 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA--------- 247 + L+E + G+D+ I ++ +G Y LSG K F++ M++ + L Sbjct: 161 MNLSEPQAGSDLNHIATRAVPKENGAYALSGQKIFITWGDQEMTENIVHLVLARLPDAAP 220 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G V F+VP+ L + G NG+ +++K+G ++ T +EF N G+L+G Sbjct: 221 GVQG-VSMFIVPKYLVNADGSLGGRNGVRAIGIEHKLGIHASPTCTMEFDNAEGYLVGRA 279 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------ILIDQP 353 + M L+ I + + A+ YA+ R V G +I P Sbjct: 280 GKGLAYMFTMMKTARLNVGIEGHAVAERAYQNALAYAKER-VQGRDEADGSDDVAIIRHP 338 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCKM 407 ++R + +AA AL R A D A + R E + PI K W Sbjct: 339 DVRRMLLIQKATLAAQRALYLRAAALTDFAAACPDNVLRKEAERELDFLIPIVKAWPTDN 398 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + A++ GG+GY+EE +A++ R+ I G+ D+ G N Sbjct: 399 GVVLTNLAIQIYGGAGYVEESGVAQYLRDVRITPIYEGTNGIQAADLAGRKTTGKN 454 >gi|218296043|ref|ZP_03496812.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218243420|gb|EED09949.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 372 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 35/270 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K LTE + G+D ++ ++ +++ G + L+G K W S+ + ++++A+ Sbjct: 111 PLAKGEWIGAFCLTEPQAGSDAKSLRAEARRVPGG-FVLNGVKSWITSAGQAHLYVVMAR 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 E + FLV E G+P GL + + K+G + T E+ F LLG Sbjct: 170 TEKGISAFLV----EKGTP-GLSFGPPEEKMGLHAAHTAEVRLEEVFVPEENLLG----- 219 Query: 306 TGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356 E+ + L Y LDS + V+ V +A + YA +R G L + + Sbjct: 220 ----EEGRGLAYALAGLDSGRVGVAAQAVGIARGAYEIAKAYADQREQFGKKLREHQAIA 275 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 IAD+ + + AA AL+ R A D + + EA+ A++ A ++A V EA+ Sbjct: 276 FKIADMHVSLEAARALTLRAAEKKDRGERFTLEASAAKLFA-------SRVAVEVTREAV 328 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + +GG GY + + R+YR++ I G+ Sbjct: 329 QVLGGYGYHRDYRVERYYRDAKVTEIYEGT 358 >gi|114565833|ref|YP_752987.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336768|gb|ABI67616.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 379 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 35/285 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K +TE GTD+ A T+ D Y L+G K F S+ P++D F++ A Sbjct: 113 PLAKGQHIGAFAVTEPGAGTDVGAATTTATLDGDS-YVLNGIKTFTSNGPVADTFVVFAF 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + +G + + GL + K+G R++ T E+ +L D V P Sbjct: 172 TDKSLGGKGMSAFIISKDNPGLKVGQHFYKMGIRASQTSEI--------ILKDCRV---P 220 Query: 309 VEDM------KILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 ED+ + I + S A +V + +L E+I Y+++R G + Sbjct: 221 REDLLGKEGQGLQIAMSSFDHGRIGIAAQAVGITQAALDESISYSKQRVQFGKPISKNQA 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ IAD+A DIAAA L A D+ + S+EAA A++ A +M+ ++ Sbjct: 281 IQWMIADMATDIAAARFLYSYAAFLKDQKQPFSKEAAMAKVFA-------AEMSTRHTSK 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLL 458 A++ GG GYI+ + + R R++ I G+ A + + NLL Sbjct: 334 AVQIHGGYGYIKGQKVERLMRDAKITEIYEGTSEAQRMVIAGNLL 378 >gi|307294245|ref|ZP_07574089.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306880396|gb|EFN11613.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 377 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 41/271 (15%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEG 251 AIG LTE G+D +AI + ++ ++G Y L+G K F++S ++ F + G Sbjct: 117 AIGAFALTEADAGSDASAIRTSARQ-AEGGYVLNGSKQFITSGRIAKLAIVFAVTDVAAG 175 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297 + G FLVP G +++ K+G ++ T + F F G+ Sbjct: 176 KRGISAFLVPT-----DTQGFFVDKVEQKLGQGASDTCAIRFDEMFVADDLILGVPGNGY 230 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + N+ G + + + A MS+ A+ YA+ R G +I+ + Sbjct: 231 AIALSNLEAGRIGIAAQCVGMAQAAMSI---------AVGYAQERRSFGRPIIEHQAVGF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A + A+ L A D +EA+ A+++A T A +V++ A++ Sbjct: 282 RLADLAAKLEASRQLVLHAAAVKDSGGDCLKEASMAKLVASET-------AESVVSGALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+EE +A+ YR+ I G+ + Sbjct: 335 TLGGYGYLEEFGVAKIYRDVRVCQIYEGTSD 365 >gi|237798206|ref|ZP_04586667.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021058|gb|EGI01115.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 600 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + +DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAADGTYRLRGNKIFISGGDHSLSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ + EDGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFMVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L +A++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKAHQGLSYMFQMMNEARIGVGLGAAMLGYSGYLYSL----EYARDR--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KQAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 QGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|169235589|ref|YP_001688789.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] gi|167726655|emb|CAP13441.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] Length = 380 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 29/283 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP+ + L+E G+D+ A+ + Q+ D Y +SG K W + ++D + A Sbjct: 112 APLSRGDDIGAFALSEAGAGSDVPAMETTAQRDGDA-YVISGEKLWISNGSVADTVTVFA 170 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 + + G F+V R ED +G ++K+G++ T EL F + LL Sbjct: 171 KTDPDAGHRGISSFIV-RPAED---DGFIVAGTEDKLGDKGCPTAELRFDDMRVPADRLL 226 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G+ + + +I I A SV R +L +A YA+ R G + D + Sbjct: 227 GEEGDGFKHALETLNGGRITI----AARSVGLARAALDDAREYAQDRDQFGQAISDFQTI 282 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+ + AA L + A+ +S +EAA A++ + +++ V E Sbjct: 283 QHKLADMDTKLQAAELLMHKAADLKIRGESFIKEAAQAKL-------YASEISREVANEG 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 ++ GG GY ++ R+YR++ N I G+ + + N L Sbjct: 336 IQIHGGYGYTKDFDAERYYRDAKLNEIYEGTSEILRNTIANEL 378 >gi|149182451|ref|ZP_01860926.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1] gi|148849844|gb|EDL64019.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. SG-1] Length = 379 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 28/283 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247 PM + G GLTE G+D + + K+ Y L+G K F+++ ++D +++ A Sbjct: 113 PMAQGEKIGGYGLTEPASGSDAGGMKTTA-KLDGDHYILNGSKIFITNGGIADIYVVFAL 171 Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 Q + F++ E G + + K+G RS+ T E+ F N + N Sbjct: 172 TDPSQRQRGTTAFIIESDFE-----GFSVGKKEKKLGIRSSPTTEIVFDNC---RVPKEN 223 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 + E KI ++ LD ++ V +A+ +I YA+ R G + + Sbjct: 224 MLGKEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDASISYAKEREQFGKPIAANQGISF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IAD+A I A+ L+++ A E +E+A +++MA T A V EA++ Sbjct: 284 KIADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLMAGDT-------AMKVTTEAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R+ R++ I G+ L + ++ K Sbjct: 337 IFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMVTK 379 >gi|119713661|gb|ABL97712.1| acyl-CoA dehydrogenase [uncultured marine bacterium EB0_39H12] Length = 380 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 17/267 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 LG+TE GG+D+A + + + DG + L+G K F++ M ++ ++ G+ G + Sbjct: 125 LGITEPGGGSDVAQMKTIAHR--DGNEWVLNGSKTFITGGMQASYFVIGARTGKEGLGGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV-EDMKI 314 + G ++ K+G ++ T L F + L+G+ N + + Sbjct: 183 SLFFVEADTPGFTRSAIEKKMGWWTSDTATLYFDDCRIPADNLMGEENKGFYAIMNNFNY 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 Y+ A M R E + Y++ R G LI+ V++ +AD++ I A A Sbjct: 243 ERYMMGAQMLGMAKRC-FEECVQYSQDRKTFGKSLIEHQVIRHKLADMSAKIDAMDAYLN 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 ++A ++ E A I K++C + ++ +EAM+ GG+GY+ + R Y Sbjct: 302 QVAQLMNDG-----EMPVAEISK--IKFFCSECLESIASEAMQIFGGAGYLRGNPVERIY 354 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 RE +I G G+ ++ L + + G Sbjct: 355 REVKVMAI--GGGSKEIMKDLTVKQLG 379 >gi|104779425|ref|YP_605923.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95108412|emb|CAK13106.1| glutaryl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 393 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGYRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|296330517|ref|ZP_06872995.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674566|ref|YP_003866238.1| short-chain specific acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152199|gb|EFG93070.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412810|gb|ADM37929.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus subtilis subsp. spizizenii str. W23] Length = 380 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 33/270 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256 GLTE G+D +Q + I++G Y ++G K ++++ +++ V G+ G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKN 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311 ++ L+ GL +K+G R + T E+ LL D+ N+ P + Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEI--------LLEDVRVPACNLLGDPTKG 232 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 K +Y LD +S++ + V +A+A + YA+ R G + ++ +AD+A++ Sbjct: 233 FKQFLYTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAME 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + + A D + ++EAAYA++ A +MA +A++ GGSGY+ Sbjct: 293 IDLARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYM 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455 +E + R R+ A + +G G + + ++ Sbjct: 346 KEYGVERMLRD--AKLMEIGEGTSEIQRIV 373 >gi|293332891|ref|NP_001168588.1| hypothetical protein LOC100382372 [Zea mays] gi|223949393|gb|ACN28780.1| unknown [Zea mays] Length = 407 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 29/286 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + PK+ S E+ IG L ++E G+D+ ++ + +K+ DG Sbjct: 129 SPEQRLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 173 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P + ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 174 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 232 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ + M+ L + Y R Sbjct: 233 SDTCELVFENCFVPRENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQACLDVVLPYVR 292 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 293 QREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA--- 349 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++C+GG+GYI E R R++ I G+ Sbjct: 350 ----AENATQVALQAIQCLGGNGYINEYPTGRLLRDAKLFEIGAGT 391 >gi|86157558|ref|YP_464343.1| acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774069|gb|ABC80906.1| Acyl-CoA dehydrogenase, type 1 [Anaeromyxobacter dehalogenans 2CP-C] Length = 385 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 11/265 (4%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP + L ++E G+D+AAI + ++ G ++G K ++++ F+ +A Sbjct: 119 APAVRGERVAALAVSEPDAGSDVAAIRTTARR-DGGDLVVNGSKMWITNGARADFLTMAV 177 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 G G + LL G R K+G S+ T L F + LLG+ + Sbjct: 178 RTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQG 237 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 V L +A+ +V+GM++ L +AI Y R G + + +AD Sbjct: 238 FYHVMANFQGERLVAAVQAVAGMQLMLEDAIRYGGERSAFGRPVGKFQAWRHRLADHLTS 297 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L++R A+ + E + A++ A C++A V + M+ GG GY+ Sbjct: 298 VEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGYV 350 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E IAR +R+ A +I G+ M Sbjct: 351 LESDIARAWRDVRAMTIAGGTSEIM 375 >gi|332978365|gb|EGK15088.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 594 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ I ++ DG Y +SG K F++ D ++LA+ EG Sbjct: 166 LTEPHAGTDLGIIKTKANPNDDGSYSISGTKIFITGGEHDLTENIIHLVLAKTPNAPEGS 225 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + EDGS N L +++K+G + +AT + F G+++G+ N Sbjct: 226 KGISLFVVPKFIVNEDGSLGERNSLAAGSIEHKMGIKGSATCVMNFDGAKGWMIGEENTG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + M + + + G ++ A YA R +I Sbjct: 286 LASMFVMMNYERVTMGLQGLGGTELAYQNAAAYALDRAQGRSDTQIQSPEKPADQIIHHA 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + + A+ + +A DE+K + AA ++ PI K + Sbjct: 346 DVRRMLLNARANAEASRCFAMYVAKQLDESKFSVDPENAKAAAARVALLTPIAKAFLTDK 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + + GG GYI E + + R++ I G+ LD+L Sbjct: 406 ALEATVDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGANGIQALDLL 453 >gi|296445505|ref|ZP_06887462.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] gi|296257071|gb|EFH04141.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] Length = 595 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + LTE + GTD+ +T++ DG Y ++G K F+S+ D + Sbjct: 153 PMAAGRWTGTMNLTEPQCGTDLGLLTTKATPRGDGSYSITGQKIFISAGEHDLSENIIHL 212 Query: 245 MLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++EG + F+VP+ + DGS N + +++K+G NAT + + Sbjct: 213 VLARIEGAPAGVKGISLFIVPKFEVAADGSLGVRNKVVCGAIEHKMGIHGNATCVMNYDG 272 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----------H 343 G L+G+ N + M L A+ ++ V+ A+ YA+ R + Sbjct: 273 ARGHLVGEANRGLAAMFVMMNEARLGVAVQGLALSEVAYQNALSYAKERLQGRSLSGAKN 332 Query: 344 VSGGI--LIDQPVMKRAIADI------ALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 SGG +I P ++R + +I A +A AL +A+ ++A++R + Sbjct: 333 PSGGADPIIVHPDVRRNLLEIRAFNEAARGLALLAALDSDVAHRAEDARARQAAEDRLGL 392 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K M +A + GG GYI E + + R++ I G+ LD++ Sbjct: 393 LTPVLKGVFTDMGFDNAVKAQQIWGGHGYINENGMEQFVRDARIAMIYEGANGIQALDLV 452 Query: 456 N 456 Sbjct: 453 G 453 >gi|32967544|gb|AAP92447.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens] Length = 467 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 35/304 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LT GTD+ I ++ + +DG Y +SG K F++ D ++LA++ Sbjct: 41 LTGPHAGTDLGIIRTKAEPRADGSYAISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGP 100 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + + G N + +++K+G +++AT + F G+L+G+ N Sbjct: 101 KGISLFLVPKFMVNADGSLGERNPVTCGSIEHKMGIQASATCVMNFDQAIGYLVGEPNKG 160 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS------------GGILIDQP 353 + M L I ++ S AI YAR R S +I P Sbjct: 161 LAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARDRLQSRSPTGPQAKDKVADPIIVHP 220 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + A S +A D AK +R + ++ P+ K + + Sbjct: 221 DVRRMLLTMKAANDGGRAFSTYVAMQLDTAKFSEDPDTRKRAESLVALLTPVAKAFLTDL 280 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT-NLFE 466 + GG GYI E + R+ I G+ LD++ G+ F Sbjct: 281 GLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFY 340 Query: 467 QLFS 470 +LF+ Sbjct: 341 KLFA 344 >gi|331002206|ref|ZP_08325725.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411300|gb|EGG90716.1| hypothetical protein HMPREF0491_00587 [Lachnospiraceae oral taxon 107 str. F0167] Length = 382 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + + LTE G+D A +T+ K D Y L+G K F++ +P+SD ++ A+ Sbjct: 115 PVVRGEKKLSFALTEPGAGSDAAGMTTTAVKDGD-YYILNGRKCFITMAPLSDYAVVFAK 173 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301 + G V + D G+ + ++K+G AT V + SN G Sbjct: 174 TDMTKGTRGVSAFIIDMKQEGVSCGKHEDKMGLIGCATSDIVMENVRVHKSNLLGEEGKG 233 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 N++ + LD+ + V+ + +AE A YA+ R G + + Sbjct: 234 FNLA---------MATLDTGRLGVASQAIGVAEGCLEEACKYAKERKQFGKNIGAFQAIG 284 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 IAD+A + AA L++R A D + + A + K + ++ + A+A+ Sbjct: 285 FTIADMATKLEAAKQLTYRAAYMMDTKQDSG-------MAASMAKLYSTEVCNEIAAKAV 337 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI++ + R YR+ +I G+ Sbjct: 338 QIHGGYGYIKDYKVERMYRDCRVFTIYEGT 367 >gi|328545885|ref|YP_004305994.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326415625|gb|ADZ72688.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 403 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y L G K W +SP++D F++ A+ E G + Sbjct: 145 FGLTEPDAGSDPAGMRTRAEKI-DGGYRLKGSKMWISNSPIADVFVVWAKSEAHDGA-IR 202 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + LL +++ GP Sbjct: 203 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP------F 255 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 256 GCLNRARYGISWGAMGAAEDCWHRARQYGLDRKQFGRPLAQTQLFQKKLADMQTEIALGL 315 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A V +A + GG+G EE + Sbjct: 316 QASLRVGRLFDEGKVAPE-------MISIVKRNNCGKALDVARQARDMHGGNGIQEEYHV 368 Query: 431 ARH 433 RH Sbjct: 369 MRH 371 >gi|325273964|ref|ZP_08140125.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51] gi|324100898|gb|EGB98583.1| glutaryl-CoA dehydrogenase [Pseudomonas sp. TJI-51] Length = 393 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRAKKVEGG-YRLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGG 347 + D+ GP L+SA +S + AEA H AR+ R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEACWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 336 ALDIARMARDMLGGNGISDEFGVARH 361 >gi|293402114|ref|ZP_06646253.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304506|gb|EFE45756.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 633 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F++ +P++D +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGGKIFITNAPVADTYVVFAS 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TNPDAGTHGISAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GQGFKIAMATLDGGRIGIAAQALGIAQGAYEHALEYAKERIQFGKPIAQQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + + V+ +A++ GGS Sbjct: 289 ATKLRCARFLVYSAA----ELKEAHEPYGMESAMA---KQYTSDICLEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKICTIYEGT 365 >gi|117920993|ref|YP_870185.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. ANA-3] gi|117613325|gb|ABK48779.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3] Length = 596 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +DG + ++G K F+SS +D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPTADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L DGS N L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ S+ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462 +A + GG GYI E + + R+S I G+ LD++ LL Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460 Query: 463 NLFEQLFSTLEQDLGSSGK 481 +Q + + + + S GK Sbjct: 461 AAMQQWSALVTEFIQSQGK 479 >gi|170722519|ref|YP_001750207.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169760522|gb|ACA73838.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 594 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 40/312 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-----AFIMLAQ----- 248 + LTE + G+D+AA+ +G+ + +G Y + G+K F++ D ++LA+ Sbjct: 162 MNLTEPQAGSDLAAL--RGRAVPEGDHYRIVGNKIFITWGEHDMAENIVHLVLARLPDAP 219 Query: 249 --VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFL 298 V+G + FL P+ L DGS N L +++K+G + T + F + G+L Sbjct: 220 PGVKG-ISLFLCPKFLINADGSLGERNDLICTSIEHKLGIHGSPTASMSFGDGGGAIGYL 278 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILID 351 +G+ + + M L+ + V + A YA +R V G + Sbjct: 279 VGEPHQGLACMFTMMNHARLNVGLEGVGVSERAYQHARSYALQR-VQGKPTLAGSSTIAG 337 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCC 405 ++R + D+ A A+++ A D +A+ R++ ++ P+ K WC Sbjct: 338 HADVRRMLMDMKARTEAMRAVAYFCAGQMDRAAGHPDAQERTQAQDLVGLLTPVVKGWCT 397 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 A + ++ ++ GG GY+EE A+++R++ +I G+ D++ + +G Sbjct: 398 DNAEGITSDGVQIHGGMGYVEETGAAQYFRDARITTIYEGTTGIQANDLIGRKIAREGGR 457 Query: 464 LFEQLFSTLEQD 475 + L + ++ D Sbjct: 458 TIKALLTRIDSD 469 >gi|49088442|gb|AAT51570.1| PA0447 [synthetic construct] Length = 394 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 44/275 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228 + + PK+ S EY IG GLTE G+D ++ ++ +K+ DG Y L Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164 Query: 229 SGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 SG K W +SP++D F++ A+ EG++ F++ + E GL + K+G R++ T Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWE-----GLSAPAIHGKVGLRASIT 219 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 E+ N F ++ GP L+SA +S + AE A Y Sbjct: 220 GEIVMDNVFVPEENAFPEVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G L ++++ +AD+ +I A RL DE + E + Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 I K C A + A + +GG+G +E IARH Sbjct: 327 IMKRNSCGKALDIARLARDMLGGNGISDEFGIARH 361 >gi|295133017|ref|YP_003583693.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87] gi|294981032|gb|ADF51497.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87] Length = 390 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + S +K D Y L+G K F+++ + +D ++ A+ + + Sbjct: 122 LCVTEPFGGSDVAGMRSTAEKKGD-TYILNGSKTFITNGVYADYLVVAAKTSPELKSKGM 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + + G+ +L NK+G R++ T E+ F N ++ S E+ K Y Sbjct: 181 SIFIVNRNAKGVSASKL-NKLGWRASDTGEIAFDNV------EIPASNMLGEENKGFSYI 233 Query: 318 -----LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ IM V+ +L AI+Y R G + + ++ IAD+ ++ Sbjct: 234 MQHFAMERLIMGVNAHARAEFALDYAINYMNEREAFGKKINEFQALRHKIADMVSEVTVI 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ A + + +EA+ +++++ K+A VI +++ +GG GY+E+ Sbjct: 294 KEFNYATAYKLGKGEYPVKEASMSKLLS-------TKIADEVIYGSLQMLGGYGYMEDYP 346 Query: 430 IARHYRESPANSILLGSGNAMVL 452 +AR +R+S I G G + +L Sbjct: 347 LARMFRDSRLGPI--GGGTSEIL 367 >gi|293608467|ref|ZP_06690770.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829040|gb|EFF87402.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 384 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAMKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|269837232|ref|YP_003319460.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786495|gb|ACZ38638.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 383 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA------QVEGRVG 254 LTE G+D AA+T++ ++ D Y L G K F++ + +I+ A + R+ Sbjct: 125 LTEPSAGSDAAALTTRARRDGDH-YVLDGRKIFVTHGDHAGLYIIFAVTDPEARTSRRIS 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 F V R GL R ++K+G R++ E+ + LLG+ G Sbjct: 184 AFAVDR-----DTPGLAVPRREHKLGLRASEIAEVTLTECRVPATRLLGNEGDGFGIA-- 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + LD + + V +A A YAR R G + D ++ +AD+A I Sbjct: 237 ---MALLDGGRIGIGAQAVGIARGAFDLARRYARERQQFGRPIADFQAIQWKLADMATRI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A D+ + + A+ A++ A T + V +A++ GG GY+E Sbjct: 294 DAARLLVWRAATLRDQGQPHTLAASQAKLFASETATF-------VTDQAVQIHGGYGYLE 346 Query: 427 ERSIARHYRESPANSILLGS 446 E ++ R++R++ A I G+ Sbjct: 347 EYAVERYFRDARATVIYEGT 366 >gi|226372490|gb|ACO51870.1| Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Rana catesbeiana] Length = 409 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 18/266 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + + Sbjct: 151 LSEPGNGSDAGAASTVARLDGDH-WVLNGTKSWITNAWDASATVVFATTDKSLKHKGISA 209 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 L + GL + ++K+G R+++T L F + + N+ P KI + LD Sbjct: 210 FLVEMPSPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRENLLGKPGMGFKIAMQTLD 266 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ + +A+A + YA +R G + ++ +AD+AL + +A L++ Sbjct: 267 AGRIGIASQALGIAQAALDCAVDYAEKRIAFGAPITKLQAIQFKLADMALALESARLLTW 326 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D K ++EAA A+++A + A + +A++ +GG GY+ E RHY Sbjct: 327 RAAMLKDNKKPYTKEAAMAKLVA-------SEAATRISHQAIQILGGMGYVTEMPAERHY 379 Query: 435 RESPANSILLGSGNAMVLDVLNLLEK 460 R++ I G+ L + N L K Sbjct: 380 RDARITEIYEGTSEIQRLVIANQLVK 405 >gi|28900976|ref|NP_800631.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|260366187|ref|ZP_05778647.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030] gi|260879829|ref|ZP_05892184.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034] gi|260894503|ref|ZP_05902999.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member 8) (acad-8) (activator-recruitedcofactor 42 kda component) (Arc42) [Vibrio parahaemolyticus Peru-466] gi|28809422|dbj|BAC62464.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|308086388|gb|EFO36083.1| isobutyryl-coa dehydrogenase, (acyl-coa dehydrogenase family member 8) (acad-8) (activator-recruitedcofactor 42 kda component) (Arc42) [Vibrio parahaemolyticus Peru-466] gi|308092698|gb|EFO42393.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus AN-5034] gi|308114759|gb|EFO52299.1| isobutyryl-CoA dehydrogenase [Vibrio parahaemolyticus K5030] Length = 384 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 32/265 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVGCF 256 LTE G+D A++T+ + D + L+G K F+S +D +++A + G V F Sbjct: 124 LTEPNAGSDAASLTTSAVREGDE-FVLNGAKVFISGAGDTDVLVVMARSCGEGAGGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP E G+ Y + + K+G T + F N +LLG+ E K Sbjct: 183 VVPADCE-----GISYGKKEAKMGWNCQPTRMITFENVRIPADYLLGEEG------EGFK 231 Query: 314 I-LIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD A SV + +L EA Y R G L ++ +AD+A ++ Sbjct: 232 FAMLGLDGGRINIATCSVGTAQQALNEAKQYMTERKQFGRSLAQFQALQFKLADMATELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA + +A+ +E++AY + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLAAAKLDAQ-HAEKSAYC----AMAKRFATDVGFKVCDQALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAMVL 452 + RH+R+ + IL G+ M L Sbjct: 346 YPVERHFRDVRVHQILEGTNEIMRL 370 >gi|70733629|ref|YP_257269.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] gi|68347928|gb|AAY95534.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] Length = 393 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A+ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKV-DGGYSLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 + D+ GP L+SA +S + AE A Y R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E IARH Sbjct: 336 SLDIARMARDMLGGNGISDEFGIARH 361 >gi|258591366|emb|CBE67665.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment'] Length = 383 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 29/282 (10%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFL 235 +F E + P + A+G +TE G+D A + Q + +G + L+G K F+ Sbjct: 100 LFGNEAQRSRYLPQLTSGQALGAWAMTEPGSGSDAAGM--QATAVLEGDHWVLNGTKNFI 157 Query: 236 S-SPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++ ++++A E + F+V E G+P GL R ++K+G R++ T ++ Sbjct: 158 TQGSVAGIYVIMALTDRATRERGISAFIV----EQGTP-GLRVGRKEHKMGFRASDTAQV 212 Query: 290 EFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHV 344 + LLGDL+ G ++ + IL + A +SV R L E + YA+ R Sbjct: 213 ILEDVRIPDANLLGDLH--HGFIDALTILDAGRIGMAALSVGIARGCLEEGLKYAKERQA 270 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + ++ +AD+A +I AA L + A D + ++EA+YA++ A T Sbjct: 271 FGRPIANFEAIQWKLADMATEIDAARLLVLQAAYLKDTDQPFTKEASYAKLFASET---- 326 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A EA++ GG GYI+E + R++R++ +I G+ Sbjct: 327 ---AMKAATEAVQIHGGYGYIKEFPVERYFRDAKFCAIGEGT 365 >gi|197097734|ref|NP_001125424.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Pongo abelii] gi|55728011|emb|CAH90758.1| hypothetical protein [Pongo abelii] Length = 412 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 34/277 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + E RHYR++ I G+ L + L +G Sbjct: 373 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRG 409 >gi|297181807|gb|ADI17987.1| acyl-CoA dehydrogenases [uncultured Chloroflexi bacterium HF0200_09I09] Length = 384 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 34/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC-- 255 LTE G+D++A+++ D Y LSG K ++++ + +++ A++E GR G Sbjct: 127 LTEPSAGSDVSALSTTAHLDGDD-YVLSGQKTYVTNGDRAGIYLIFAKLEPGRGRDGIAL 185 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 F+V R GL R+++K+G R++ T ++ + T L+G+ + E Sbjct: 186 FIVER-----KARGLSVVRVEDKMGLRASGTAQIALDDVRVTKNQLVGEAD------EGF 234 Query: 313 KI-LIYLDSAIMSVSGMRVSLA-EAI----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 +I L L+ + + + M + +A EA+ YA R + G + D V + A AD+ ++I Sbjct: 235 RIALGTLNGSRVGIGAMCLGVAKEALELGWQYAHERELFGQTVGDFQVTQHAFADMEVEI 294 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A ++ +R A + EA+ I K + + A ++ +++ GG+GY++ Sbjct: 295 FAIESMVYRTARRLSNGDDVAAEAS-------ICKIFATEAAQRIVDRSLQMHGGAGYLK 347 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +I R YR+ I G+ +V ++++ Sbjct: 348 DSAIERLYRDIRVARIYEGANEVQRNNVYRVMKR 381 >gi|227821069|ref|YP_002825039.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234] gi|227340068|gb|ACP24286.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium fredii NGR234] Length = 593 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 50/301 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE G+D+ + ++ ++ +DG Y + G K F++ +D + L A Sbjct: 160 MNLTEPHAGSDLGVLKTRAERRADGTYRIFGQKIFITWGEHDFTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN--------T 294 +G + FLVP+ L + G+ N L L++K+G + T + + + Sbjct: 220 GTKG-ISLFLVPKFLVNADGSLGARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGA 278 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH------ 343 G+L+G+ N + M +++A ++V V++AEA I YAR R Sbjct: 279 IGYLVGEENRGLACMFTM-----MNNARLAVGMQGVAIAEAATQKAIAYARERTQGRAPG 333 Query: 344 -VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-----ARI 395 G+ +I+ P + R + + A A+++ A++ D A + E A+ + + Sbjct: 334 WTGQGMSPIIEHPDIARTLLTMKALTQGARAIAYACAHAVDMAHASHSEKAHQWQERSSL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + V + ++ GG G+IEE AR+ R++ I G+ +D++ Sbjct: 394 LTPIAKSFATDAGVDVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLV 453 Query: 456 N 456 Sbjct: 454 T 454 >gi|169632453|ref|YP_001706189.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|169151245|emb|CAO99931.1| acyl-CoA dehydrogenase [Acinetobacter baumannii] Length = 600 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|332528089|ref|ZP_08404120.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax benzoatilyticus JA2] gi|332112660|gb|EGJ12453.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Rubrivivax benzoatilyticus JA2] Length = 591 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/331 (22%), Positives = 153/331 (46%), Gaps = 54/331 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P ++ ++ AL+T + + + + P + S + T + LTE + G+ Sbjct: 124 LCPLLSDGAIEALLTAGSHEMQQAYIPNLISGRWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D++ + ++ + DG Y + G K F++ D ++LA+V G + F+ Sbjct: 171 DLSLVRTRAEPQGDGTYKVFGTKIFITWGEHDMAENIVHLVLARVTGAPEGVKGISLFVC 230 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 P++L DG+ N + +++K+G +++ T L+F + G+L+G+ N +E M Sbjct: 231 PKVLADGTRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVGEENRG---LEYM--F 285 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS---------GGILIDQPVMKRAIAD 361 I +++A V ++LAE A+ YAR R S +I P ++R + Sbjct: 286 IMMNAARFGVGVQGIALAERAYQQAVAYARDRVQSRPVDGSTPGAAAIIRHPDVRRMLMT 345 Query: 362 IALDIAA------ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A ++ A++ +A +R + A+ + P+ K +M+ V + Sbjct: 346 MRAHTEGCRAMALVAAAAYDAAHAHPDAAARKQNQAFYEFLVPLVKGLSTEMSLDVASLG 405 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG G+IEE A+H R++ +I G+ Sbjct: 406 VQVHGGMGFIEETGAAQHLRDAKILTIYEGT 436 >gi|254429459|ref|ZP_05043166.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196195628|gb|EDX90587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 591 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/337 (21%), Positives = 137/337 (40%), Gaps = 49/337 (14%) Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 P++TS + +A+ + + + PK++S E+ T + LTE GTD+ Sbjct: 128 PALTSGACLAVDAHASEELKGQYLPKLYSGEWSGT-------------MCLTEPHSGTDL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPR 260 + ++ DG + ++G K F++ D ++LA++ + FLVP+ Sbjct: 175 GILRTKAVPNDDGSFNITGTKIFITGGEHDLTGNHIHLVLAKLPDAPAGSKGISLFLVPK 234 Query: 261 LLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L D G NG +++K+G + +AT + F + G+++G+ N + M Sbjct: 235 FLPDADNNPGEANGATCGSIEHKMGIKGSATCVMNFDDAKGWIIGEPNQGLACMFTMMNY 294 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK-----R 357 L + + S A+ YAR R +G I++ V + R Sbjct: 295 ERLSIGLQGLGLGEASYQSAVEYARERLQGRSATGAKNPEGPADPIIVHGDVRRMLMNMR 354 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 AI + +AA + + ++A ++ + ++ PI K + + Sbjct: 355 AINEGGRALAAYVGMQLDTSKFSEDADAKKKAEDRVALLTPIAKAFFTDRGLDTTITGQQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GG GYI E + + R+ + I G+ LD+ Sbjct: 415 VFGGHGYIREWGMEQFVRDCRISQIYEGTNGIQALDL 451 >gi|304311605|ref|YP_003811203.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301797338|emb|CBL45558.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 387 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 34/278 (12%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQV-------EGRV 253 TE + G+ A T++ K +DG + ++G K F+++ +D A+ ++ V + ++ Sbjct: 125 TEPQAGSWTAGFTTRATKQTDGQWSITGEKAFITNSGADITAYNLICAVTSAPTDPKSKM 184 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP G+P G+ + +K+G RS+ T + G +GD + G D + Sbjct: 185 SLFLVPA----GTP-GVTIGKSYDKLGWRSSDTHPIYLD---GAKVGD-EMMVGNEGDGR 235 Query: 314 ILIY--LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +++ SA +S + L++A I YA+ R G L ++++ IAD+A+ + Sbjct: 236 YIVHKTYQSARCFLSACALGLSQACLDHSIAYAKDRQAFGRTLGGLQLVQKMIADMAVKV 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + L+ + A D+ + E A A KY CC+M+ V A++ GG G++ Sbjct: 296 ETSRLLARQAAMKADQGTASILELAMA-------KYHCCEMSSEVADLALQVHGGFGFMN 348 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + I+R+ R++ I G G++ + ++ E G ++ Sbjct: 349 DCPISRYLRDTRITRI--GDGSSQIQTMIIAKELGLDV 384 >gi|301061812|ref|ZP_07202545.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300444102|gb|EFK08134.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 387 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 34/291 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + + + PK+ S EY G G+TE G+D+ A+ S Q D + Sbjct: 104 TDEIKEKYIPKLVSAEY-------------MGGFGITEPNAGSDVMAMKSTAQDKGDH-W 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K W ++ ++DA I A + G L ++E + NG+ L +K+G+RS+ Sbjct: 150 LINGSKTWISNTSVADALIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSS 208 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 T E+ +T + N+ P + KI+ L+ +S + + LA+A Y Sbjct: 209 PTGEIYLEDT---KVPKENILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAVTSY 265 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397 + R G + + + + I ++ AA + ++ A D+ + E A A Sbjct: 266 CQEREQFGKSIGQFQMNQDMVGQITSELEAARLVVYKAAWQKDQGNLGNTLEVAQA---- 321 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 KY ++A AM+ +G GY E +AR+YR++P ++ GS N Sbjct: 322 ---KYVAGEIAVKASQVAMKILGAYGYSTEYPVARYYRDAPTYQLVEGSTN 369 >gi|317051571|ref|YP_004112687.1| acyl-CoA dehydrogenase domain-containing protein [Desulfurispirillum indicum S5] gi|316946655|gb|ADU66131.1| acyl-CoA dehydrogenase domain-containing protein [Desulfurispirillum indicum S5] Length = 382 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 41/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR----- 252 GLTE G+D ++ + DG + L+G K F+++ +D +++ A+ + + Sbjct: 124 FGLTEPSAGSDAGG--TRTTAVRDGESWILNGSKNFITNGGEADIYVVFARTDPQARKHH 181 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + FLV E G+P G + + + K+G RS+ T EL F N L N+ E Sbjct: 182 GISAFLV----EKGTP-GFSFGKKEVKMGIRSSPTTELVFENCHIPLE---NLLGSESEG 233 Query: 312 MKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIA 360 K+ + LD + ++ + +A+ A+ YAR R DQP+ + A+A Sbjct: 234 FKVAMKTLDGGRIGIAAQALGIAQGALDHAVAYARERR-----QFDQPIGNFQAITFALA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ + AA L +R A D S S EAA A++ A T A V A++ G Sbjct: 289 DMQTRVDAARMLVYRAAVQADSGSSYSREAAMAKLFASET-------AMDVTTRAVQIHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY E + R R++ I G+ Sbjct: 342 GYGYTREYPVERMMRDAKITEIYEGT 367 >gi|257055678|ref|YP_003133510.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256585550|gb|ACU96683.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 384 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 13/241 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A++ + + D Y ++G K F++S F+ A G+ G + Sbjct: 127 LAITEPDGGSDVASLRTTAVRDGDH-YVVNGAKTFITSGCRADFVTTAVRTGQPGAHGLS 185 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G+P +RL+ K+G + T EL F + L+G N + G + + Sbjct: 186 LLVIEKGTPGFFVSRRLE-KMGWHCSDTAELSFDDVRVPASHLVGAENSAFGQIATQFVA 244 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ + + + +L + + R R G LI + ++ +A++A I A + Sbjct: 245 ERLTLAVQAYATAQRALERTVEWCRLRETFGRPLISRQTVQHTLAEMARRIDVARTYVRQ 304 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A + + +A+ A W V+ +A++ GG GY E + RHYR Sbjct: 305 VAARHAAGEEVIAQTCFAKNTAVEAGSW-------VVDKAVQLHGGLGYSRESEVERHYR 357 Query: 436 E 436 + Sbjct: 358 D 358 >gi|187927212|ref|YP_001897699.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|309780089|ref|ZP_07674841.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|187724102|gb|ACD25267.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|308921121|gb|EFP66766.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 384 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 14/259 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A++T++ + D Y +SG K F++S M +I +A G G + Sbjct: 129 LAITEPSGGSDVASLTTRAVRDGDH-YVVSGSKIFITSGMRADYITVAVRTGEAGAGGIS 187 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL +G GL LK K+G + T +L F N G LLG N V Sbjct: 188 VLLVEGDTPGLSRTPLK-KMGWWCSDTAQLHFDNCRVPVGNLLGAENRGFELVMRNFNHE 246 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A+ + R L EA+ +A +R G L+ V ++ + +A I A AL L Sbjct: 247 RLALAMQAYGLARTCLIEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDL 306 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 S + + A + +C A++ +GG G++ R YRE Sbjct: 307 MRRMQAGDSPVAQLCMLKNFATQSLQFCADT-------AVQLLGGMGFMRGTKSERIYRE 359 Query: 437 SPANSILLGSGNAMVLDVL 455 ++G G VL L Sbjct: 360 --VKVYMIGGGAEEVLSDL 376 >gi|113970722|ref|YP_734515.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-4] gi|113885406|gb|ABI39458.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4] Length = 596 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +DG + ++G K F+SS +D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L DGS N L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQNALAYAKDRLQSRAISGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ S+ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462 +A + GG GYI E + + R+S I G+ LD++ LL Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460 Query: 463 NLFEQLFSTLEQDLGSSGK 481 +Q + + + + S GK Sbjct: 461 AAMQQWSALVTEFIQSQGK 479 >gi|229489405|ref|ZP_04383268.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229323502|gb|EEN89260.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 380 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 23/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E + G+D AA++ + +DG Y ++G K W + +D + + A+ G V Sbjct: 127 LSEAQAGSDAAALSCKATP-TDGGYRVNGSKAWITNGGRADFYNLFARTSDD-GSRGVSC 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 LL D GL + + + K+G R+ T + + F L+G P+ Sbjct: 185 LLVDKDTEGLSFGKPEEKMGLRAVPTASANYDDAFIPEERLIGQRGQGL-PI----AFSA 239 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V +A+ A+ YA+ R G +ID + +AD+A + +A Sbjct: 240 LDSGRLGIAAVAVGIAQGALDDAVAYAKERKAFGKRIIDHQGLGFVLADMAAAVDSAR-- 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ GG GY ++ + R Sbjct: 298 ----ATYLDAARRRDAGVPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTQDFPVER 352 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 353 YMREAKITQIFEGT 366 >gi|157961676|ref|YP_001501710.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157846676|gb|ABV87175.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC 700345] Length = 596 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 39/303 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE GTD+A + ++ DG Y ++G K F+SS D A ++LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAIPTGDGNYSITGEKIFISSGDHDLTDNIAHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP++L +DGS N L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFVVPKILINDDGSLGESNSLYAASLEHKMGIHGNSTCVMNFDAAIGELVGEAH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350 + M L + + ++ A+ YA+ R + IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNAVAYAKDRIQGRALSGVKQPEQAADSILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404 V + ++ A + AL + A D+A+ + A + PI K + Sbjct: 342 HGDVRRMLLSQKAFN-QGTRALMGQQALWLDQAQRDCSPEQAKAASKLAALFTPIVKGFV 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 +A + GG GYI E + + R+S I G+ LD++ L +KG Sbjct: 401 TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKG 460 Query: 462 TNL 464 L Sbjct: 461 ATL 463 >gi|319953889|ref|YP_004165156.1| isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] gi|319422549|gb|ADV49658.1| Isovaleryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] Length = 389 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L ++E GG+D+A + + +K D Y ++G K F+++ + D I+ A+ +G + Sbjct: 125 LCISEPFGGSDVAGMLTTAEKKGD-TYVINGSKTFITNGVYCDYMIVAAKTNSELGNKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L D G+ +L NK+G R++ T E+ F N L+G+ N + + L Sbjct: 184 SIFLIDKKTPGVSATKL-NKLGWRASDTGEIAFDNVTIPASNLMGEENKGFSYIMEHFAL 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L I + + +L A+ Y R G + ++ ++ D+ ++ Sbjct: 243 ERLIMGINAHARAEYALDYALQYMSERQAFGKTIDKYQALRHRFVELQADMEMCREYNYL 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A R + Y A I+K KMA VI + ++ +GG GY+E+ +AR R Sbjct: 303 VA-------YRLNKGEYVVKEATISKLKSTKMADEVIYDCLQFLGGYGYMEDYPLARLLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|209965240|ref|YP_002298155.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] gi|209958706|gb|ACI99342.1| acyl-CoA dehydrogenase, putative [Rhodospirillum centenum SW] Length = 597 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 82/387 (21%), Positives = 163/387 (42%), Gaps = 67/387 (17%) Query: 141 YLMAQLEAGHLMS----PSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKT 194 ++M +L G MS P +T ++ A+ + + + + PK+ + E+ T Sbjct: 110 FVMEELMNGANMSFSMYPGLTHGAINAIKVHASDELKRRYLPKMIAGEWSGT-------- 161 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV 249 + LTE GTD+ I ++ DG Y ++G K F+S+ D ++LA++ Sbjct: 162 -----MCLTEPHCGTDLGLIKTRAVPADDGSYRITGTKIFISAGEHDLTQNIIHLVLAKL 216 Query: 250 EGR------VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 + F+VP+ L ED P NG+ +++K+G +++AT + F G+L Sbjct: 217 PDAPAGTKGISLFIVPKFLPTEDNRPGPRNGVMCGAVEHKMGIKASATCVMNFDEATGWL 276 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR------VSLAEAIHYARRR---HVSGGI- 348 +G+ P + M+ + + +A GM+ V+ A+ YA+ R GG Sbjct: 277 VGE------PHKGMRAMFTMMNAARLGVGMQGLGVATVAYQNAVAYAKDRLQGRSLGGTK 330 Query: 349 --------LIDQPVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYAR 394 +I P +++ + A AL + + D + + R E + Sbjct: 331 APEQPADPIIVHPDVRKNLMTAKAFTEGARALGYWVGMMIDVYEKHPDPRVRQEAEDFVA 390 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ P+ K + + + GG GYI E + + R++ I G+ LD+ Sbjct: 391 LLTPVVKAYFTDAGFETAVTSQQMYGGHGYIREWGMEQFVRDARIAMIYEGANGIQALDL 450 Query: 455 LN--LLEKGTNLFEQLFSTLEQDLGSS 479 + + + L + F ++ +L ++ Sbjct: 451 VGRKMPQNMGRLLRRFFHPMQAELAAA 477 >gi|6449060|gb|AAF08800.1|AF184956_7 YngJ [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 380 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 33/270 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRV--GCF 256 GLTE G+D +Q + I++G Y ++G K ++++ +++ V G+ G Sbjct: 123 FGLTEPNAGSDAGG--TQTKAITNGDKYVINGEKCWITNASYARTVIVTAVTGKSKEGKN 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311 ++ L+ GL +K+G R + T E+ LL D+ N+ P + Sbjct: 181 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEI--------LLEDVRVPACNLLGDPTKG 232 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 K +Y LD +S++ + V +A+A + YA+ R G + ++ +AD+A++ Sbjct: 233 FKQFLYTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAME 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + + A D + ++EAAYA++ A +MA +A++ GGSGY+ Sbjct: 293 IDLARQMVLKAAWLKDHNRPFTKEAAYAKLFA-------SEMATRACNQAIQIHGGSGYM 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455 +E + R R+ A + +G G + + ++ Sbjct: 346 KEYGVERMLRD--AKLMEIGEGTSEIQRIV 373 >gi|262281092|ref|ZP_06058874.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262257323|gb|EEY76059.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 600 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I S+ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFHVNADGTIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKDADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|184159453|ref|YP_001847792.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|239501702|ref|ZP_04661012.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] gi|260557139|ref|ZP_05829355.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|332876295|ref|ZP_08444070.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|183211047|gb|ACC58445.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|193078318|gb|ABO13292.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] gi|260409245|gb|EEX02547.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|322509367|gb|ADX04821.1| acdB [Acinetobacter baumannii 1656-2] gi|323519391|gb|ADX93772.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332735567|gb|EGJ66619.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 600 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|326924088|ref|XP_003208264.1| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like [Meleagris gallopavo] Length = 433 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ +K D Y ++G K W + + F ++A + G C Sbjct: 177 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWITLAEHAGVFFVMANTDPASGYKGITC 235 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V R E GL + ++K+G R+++T + F N + + N+ + K Sbjct: 236 FIVDRDTE-----GLHVGKKEDKLGIRASSTCPVTFENV---KVPETNILGQIGQGYKYA 287 Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ A+ Y + R G + D M+ IA +A + AA Sbjct: 288 IGMLNGGRIGIAAQMLGLAQGCFDHAVPYTKERVQFGKRVFDFQAMQHQIAQVATQLEAA 347 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + K +EA+ A KY+ ++A ++ +E +GG G+ + Sbjct: 348 RLLTYNAARLAETGKPFIKEASMA-------KYYAAEVATLTTSKCIEWMGGVGFTKNYP 400 Query: 430 IARHYRESPANSILLGSGN 448 I ++YR+ +I G+ N Sbjct: 401 IEKYYRDCKIGTIYEGTSN 419 >gi|241767637|ref|ZP_04765282.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241361440|gb|EER57913.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 376 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 97/397 (24%), Positives = 159/397 (40%), Gaps = 57/397 (14%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 QE+ R A + Q + P RWDK P + H GL P Sbjct: 7 QEMIRDAVRDFAQTELW-PNAARWDKEHHFP-------KEAHQGLAALGAYGICVPEEFG 58 Query: 131 QAH---KIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSREYD 184 AH A L +A + G + SVT+ + A++ + +DW Sbjct: 59 GAHLDYVTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL--------- 109 Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI 244 P+ + + LTE G+D +A+ + K D Y ++G K F++S + Sbjct: 110 ----TPLARGEMLGAFCLTEPHVGSDASALRTTAVKQGDE-YVINGVKQFITSGKNGHVA 164 Query: 245 MLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---- 294 ++ V G+ G FLVP + G RL++K+G S+ T ++ F N Sbjct: 165 IVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDNCRIPA 219 Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 G ++ G +E +I I S M+ S +LA Y++ R G + + Sbjct: 220 ENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFEAALA----YSKERESFGTPIFN 275 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + +AD A I AA L + A D K +EAA A++ A +MA V Sbjct: 276 HQAVGFRLADCATQIEAARQLIWHAAAMRDAGKPCLKEAAMAKLFAS-------EMAERV 328 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A++ +GG G + + + R YR+ I G+ + Sbjct: 329 CSAAIQTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|111024023|ref|YP_706995.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110823553|gb|ABG98837.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 109/409 (26%), Positives = 180/409 (44%), Gaps = 70/409 (17%) Query: 63 EYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDR 122 E +S TA++ A A + P HA WD+ + P +LR++ G+ I+ R Sbjct: 8 ERAISDTARDFA--AEHLAP--HAV-----EWDQAKHFPV--DVLRKAASLGMG-GIYIR 55 Query: 123 SFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA----SMVALMT----TPRVHKDW 174 E V + ++ AAR++ QL G PS+ + +MV M T + W Sbjct: 56 --EDVGGSELTRVDAARIF--EQLAKG---CPSIAAYISIHNMVTWMIDRFGTDEQRRAW 108 Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234 P + S + Q S LTE G+D AA++++ + D Y L+G K F Sbjct: 109 VPGLCSMD---------QLGSYC----LTEPGAGSDAAALSTRAVRDGDD-YVLNGVKQF 154 Query: 235 LS-SPMSDAFIMLAQV-EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 +S + S+ ++++A+ EG + F+VP+ GSP GL + + K+G + T ++ Sbjct: 155 ISGAGTSEVYVVMARTGEGGPRGISAFIVPK----GSP-GLSFGPNEVKMGWNAQPTRQV 209 Query: 290 EF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 F N G G ++ + ++ I A SV G + +L A+ Y R Sbjct: 210 IFEDVRVPAGNLLGSEGGGFRIAMAGLNGGRLNI----AACSVGGAQTALERAVAYLTDR 265 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITK 401 G L+D ++ +AD+ ++ AA L +R A + D A E A A+ A T Sbjct: 266 KAFGAPLLDSQALQFQLADMRTELEAARTLLWRAAAALEDGAPDVVELCAMAKRFATDTG 325 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + V A++ GG GY+ E I + R+ + IL GS M Sbjct: 326 F-------EVANRALQLHGGYGYLAEYGIEKIVRDLRVHQILEGSNEIM 367 >gi|169794774|ref|YP_001712567.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213157898|ref|YP_002320696.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215482318|ref|YP_002324500.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|332852225|ref|ZP_08434030.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332870447|ref|ZP_08439211.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|169147701|emb|CAM85564.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213057058|gb|ACJ41960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213987206|gb|ACJ57505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|332729355|gb|EGJ60695.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332732184|gb|EGJ63452.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 600 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|330970886|gb|EGH70952.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 601 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGVMRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|307728568|ref|YP_003905792.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307583103|gb|ADN56501.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 396 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEENGKDTIRGFILERGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AEA + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E IARH Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364 >gi|307941533|ref|ZP_07656888.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4] gi|307775141|gb|EFO34347.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4] Length = 593 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 94/447 (21%), Positives = 179/447 (40%), Gaps = 72/447 (16%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLM 152 +V P W L R I G W+ P + + A L L + Sbjct: 69 EVSTPPGWKELYHRWIEGG-----WNGLSSPESAGGQGLPQMLSTAALELWNSGSMAFAI 123 Query: 153 SPSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 P++T ++ AL + ++ + K+ S E+ T + LTE + G+D Sbjct: 124 GPTLTIGAIEALEKHASDKLKATYLEKLVSGEWMGT-------------MNLTEPQAGSD 170 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLV 258 + A+ S+ ++ DG Y + G K +++ M+D + L A G + FLV Sbjct: 171 LNALKSKAERAGDGTYRIFGQKIYITYGEHDMTDNIVHLVLARLPDAPAGTRG-ISLFLV 229 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G + T + + + G+L+G+ N + Sbjct: 230 PKFLVNEDGSLGDRNDVRCAGVEHKMGIHGSPTCTMIYGDNDGAIGWLIGEENKGLACMF 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG------GILIDQPVMKRAI-- 359 M L + + + +A YA R V G + P +KR++ Sbjct: 290 TMMNNARLAVGVQGLGVAERACQDAYAYAMERKQGRVPGQKEEGMAPIAHHPDIKRSLLG 349 Query: 360 ----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A I A A + +AN+ + ++ + A ++ PI K V + Sbjct: 350 MRARTQVARSICYACAHAIDMANTATDRDQKTFWSERAGLLTPIAKALSTDFGVEVASIG 409 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-------------NLLEKGT 462 ++ GG GY+EE +A+H R++ I G+ +D++ +++ Sbjct: 410 VQIHGGMGYVEETGVAQHLRDARIAPIYEGTNGIQSIDLIMRKLPLSGGDHVRGFIQELR 469 Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRD 489 + ++ + DLG++G ++ L D Sbjct: 470 EVADEAIQSNRDDLGTAGARLNAALAD 496 >gi|284167580|ref|YP_003405858.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511] gi|284017235|gb|ADB63185.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 374 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 29/269 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G L+E G++ A +T++ + D Y ++G K W + ++ I+ A Sbjct: 109 PEMVTGRPVGAFALSEPEAGSNPAEMTTEARLEGDE-YVINGTKQWITNGERAEVVILFA 167 Query: 248 QVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + V FLVP+ + +GL + ++K+G R++ T L F G + N Sbjct: 168 KTDRGDPDSVTQFLVPKDV-----DGLEVGKKEDKLGLRASDTTTLVFD---GVRIPAEN 219 Query: 304 VSTGPVEDMKILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 T E +K + + A +V + +L ++I YA R G +ID + Sbjct: 220 RLTEVGEGLKAAFSILTGGRVGIASQAVGVAQAALDDSIAYANDREQFGKPIIDHQAIGH 279 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ D+ AA L+ R A +E ++ AA A KY+ + A V EA++ Sbjct: 280 KLADMQTDVQAARLLT-RDAARKNEGDVDAKSAAMA-------KYFASEAAVDVANEAVQ 331 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY ++ + R+YR++ +I G+ Sbjct: 332 IHGGYGYTKDFDVERYYRDAKITTIYEGT 360 >gi|242089359|ref|XP_002440512.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor] gi|241945797|gb|EES18942.1| hypothetical protein SORBIDRAFT_09g002260 [Sorghum bicolor] Length = 410 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 135/294 (45%), Gaps = 37/294 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + PK+ S E+ IG L ++E G+D+ ++ + +K+ DG Sbjct: 132 NPEQKLKYLPKLISGEH--------------IGALAMSEPNSGSDVVSMKCKAEKV-DGG 176 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P + ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 177 YVLNGNKMWCTNGPSAQTLVVYAKTDLAAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 235 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IH 337 + T EL F N F + NV + + +++ LD + ++G + L +A + Sbjct: 236 SDTCELVFENCF---VPRENVLGEEGKGVYVMMSGLDLERLVLAGGPIGLMQACLDVVLP 292 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R+R G + + ++ +AD+ + ++ + + +A D K ++ A + A Sbjct: 293 YVRQREQFGRPIGEFQFIQGKMADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFA 352 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A V +A++C+GG+GYI E R R+ A +G+G + V Sbjct: 353 -------AENATQVALQAIQCLGGNGYINEYPTGRLLRD--AKLFEIGAGTSEV 397 >gi|52841104|ref|YP_094903.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296890|ref|YP_123259.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris] gi|52628215|gb|AAU26956.1| acyl CoA dehydrogenase, short chain specific [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750675|emb|CAH12082.1| hypothetical protein lpp0931 [Legionella pneumophila str. Paris] Length = 384 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 152/380 (40%), Gaps = 55/380 (14%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P + WD+ + P LR + G+ + E + Q ++ AA ++ QL Sbjct: 26 PMADFWDEQGYFPI--ETLREAAQLGMAGMVVR---EDIGGAQLSRLDAALIF--EQLAT 78 Query: 149 GHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 G + + + S AS+V + + K W PK+ S E V LT Sbjct: 79 GCIPTSAYLSIHNMVASLVDRYGSQEIRKKWGPKLTSME-------------VIASYCLT 125 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL 262 E G+D A++ ++ K + Y L+G K F+S +SD ++ + + + L+ Sbjct: 126 EPESGSDAASLKTRAVKEGE-YYVLNGAKAFISGGSVSDVYLCMVRTGDESHHGISCLLI 184 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVE 310 E +P GL + +L+ K+G R+ T L F N GF + LN G Sbjct: 185 EKNTP-GLTFGKLEKKLGWRNQPTCMLYFENCRVPIANRVGEEGMGFKIA-LNALNGG-- 240 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ G L + Y R G L ++ AD+ D AA Sbjct: 241 ------RVNIASCSLGGALACLRMSQSYMHERKQFGKPLTQMQALRFYFADMLTDYEAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +R A + D A + + K +A + +AM+ GG GY+ + I Sbjct: 295 LMVYRAAAAMDNDDPN------APMYCAMGKRLATDVAFRISDKAMQLHGGYGYLRDYQI 348 Query: 431 ARHYRESPANSILLGSGNAM 450 R +R+ + IL G+ M Sbjct: 349 ERIFRDLRVHQILEGTNEIM 368 >gi|330891274|gb|EGH23935.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 601 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKAADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|330501553|ref|YP_004378422.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328915839|gb|AEB56670.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 601 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/338 (21%), Positives = 148/338 (43%), Gaps = 51/338 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQ------ 248 + LTE G+ ++ + ++ + DG Y + G+K F+S P+S+ + +LA+ Sbjct: 162 MALTEPHAGSSLSDLRTRAEPHVDGSYRIKGNKIFISGGDQPISENIVHMVLAKLPDAPP 221 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + FLVP+ +DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFLVPKFHVNDDGSLGARNDVTLAGLFHKMGWRGTTSTALNFGDNGECVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------I 348 G L+ + + +I + + + ++ +G SL A + + R G Sbjct: 281 GKPHAGLSYMFQMMNEARIGVGMGAIMLGYAGYLYSLDYARNRPQGRQPDGKDPSSPQIS 340 Query: 349 LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +++ ++R A + A D+ A F ++ + A+ R+ ++ PI K Sbjct: 341 IVEHADVRRMLLTQKAYVEGAFDLGLYAARLFDDTHTLETAEDRTRALELLDLLTPIVKS 400 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 401 WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG------ 454 Query: 463 NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500 + Q+ G++ K+++ ++ D E + L Sbjct: 455 -------RKVSQNGGAALKQLLKLINDCCQRASEHESL 485 >gi|281202669|gb|EFA76871.1| acyl-Coenzyme A dehydrogenase [Polysphondylium pallidum PN500] Length = 591 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 26/270 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P T + L+E G+D A+ ++ K D G W ++ + FI++A V Sbjct: 322 PKLATEMVGSFCLSESSSGSDAFALKTRADKQGDYYVINGGKAWITNAKEAGVFIVMANV 381 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + G + L D + GL + ++K+G RS++T E+ F+ D+ V V Sbjct: 382 DPSAGYRGITAFLVDRNTPGLEVGKKEDKLGIRSSSTCEVIFN--------DVKVPASNV 433 Query: 310 -----EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + KI I L+ + ++ + LAE + Y +R G + + M+ Sbjct: 434 LGQVGKGYKIAIEGLNEGRIGIAAQMLGLAEGAFESTLPYLMQRKQFGKPIAEFQGMQFT 493 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AD+A+DI A L++ A + K EA+ A++ +C ++A V + + Sbjct: 494 YADLAVDIEAGKLLTYNAARLQEAGKPFVTEASMAKL-------YCSRIAEKVSSACITM 546 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG G +E +++R+ I G+ N Sbjct: 547 LGGVGITKEFDAEKYFRDCKVGQIYEGTTN 576 >gi|257462359|ref|ZP_05626774.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp. D12] gi|317060022|ref|ZP_07924507.1| acyl-COA dehydrogenase [Fusobacterium sp. D12] gi|313685698|gb|EFS22533.1| acyl-COA dehydrogenase [Fusobacterium sp. D12] Length = 637 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F++ +P +D +I+ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301 +G + + + G + +K+G RS++T +L F+N G Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 N++ ++ +I I A ++ + + EA++YA+ R G + Q + +AD Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L + A E K E MA K + +A ++ +A++ GG Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365 >gi|152986838|ref|YP_001346001.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961996|gb|ABR84021.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 601 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ D I+LA++ +G Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPQGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L + G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ V I YAR R +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA-----RIMAPITKYWCCKM 407 ++R + + A+ + A D +S+ EE A + PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 405 GFESANHGVQIYGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLGRKVLMTQGEAL 464 >gi|54297867|ref|YP_124236.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris] gi|53751652|emb|CAH13074.1| hypothetical protein lpp1922 [Legionella pneumophila str. Paris] Length = 375 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 23/255 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L LTE G+D+ + +Q D K+ ++D F++LA +G L Sbjct: 121 LALTESNIGSDLEHVETQLLDAGDEFILKGSKKYITLGQIADLFLVLANCQGE----LTA 176 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 L+E +P GL + N +G RSN E+ F N LLG++ + V I Sbjct: 177 VLVEKDTP-GLIITPMSNFLGLRSNMLAEIFFDNCRIPKTNLLGNIGIGFNCV----IQT 231 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + + V L +A + Y ++R L + ++++ I ++ + I AA Sbjct: 232 ALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQFDRRLDEHQLIQKMITEMVVQIKAARE 291 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L F E + + A A + I KY KMA V A++ G +G+ E + Sbjct: 292 LCFYAG----ELRQQKNPAYIAETL--IAKYAASKMAVFVSNHALQLFGAAGFEETYPVE 345 Query: 432 RHYRESPANSILLGS 446 R+YR++ I+ G+ Sbjct: 346 RYYRDAKVMEIIEGT 360 >gi|325121799|gb|ADY81322.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 384 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAMKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|91789797|ref|YP_550749.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91699022|gb|ABE45851.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 598 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 88/376 (23%), Positives = 155/376 (41%), Gaps = 64/376 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTDEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ + DG Y L+G+K F+S+ D ++LA++ +G G F V Sbjct: 175 DLGLLRTKAEPQPDGTYKLTGNKIFISAGEHDMTSNIVHLVLARLPDAPQGSKGISLFAV 234 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + +DGS NG+ +++K+G N+T ++ + G ++G N Sbjct: 235 PKFNVNKDGSLGARNGIYCGGIEHKMGIHGNSTCQMVLEDAVGTMVGAPNKGLA-----A 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP----------- 353 + + +++A + V + L E A+ YA+ R +SG D+P Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKPADPIIVHPDVR 349 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + +A A+ +A L + K R E ++ PI K + Sbjct: 350 KMLLTAKAYAEGGRALAIYCTLLLDKELHHPDEKVRKESGEIVALLTPIVKAFLTDNGHI 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465 M+ GG G+I+E + + R++ N I G+ LD+L L G L F Sbjct: 410 ATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGATLKKF 469 Query: 466 EQLFSTLEQDLGSSGK 481 +L L ++ G + K Sbjct: 470 GKLIGALIEEEGVNEK 485 >gi|296162198|ref|ZP_06844994.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295887584|gb|EFG67406.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 396 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AEA + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364 >gi|224007423|ref|XP_002292671.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana CCMP1335] gi|220971533|gb|EED89867.1| hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana CCMP1335] Length = 447 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 17/248 (6%) Query: 199 GLGLTEKRGGTDIAAITSQG--QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 G+ ++E GTD+ + S DG + L+G K W + D F++ A+ Sbjct: 178 GMCMSEPNAGTDVLGMRSNAVYDAKRDG-FVLNGTKMWITNEETGDLFLVYARTGTEKRT 236 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311 + ++E G Q++ +K+G R++ T EL F N F ++GD+N +T + Sbjct: 237 DITQFIVEGGMEGFSVGQKINDKLGMRASPTAELVFENVFLPSKTHVVGDVNGATLCMMR 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAAT 370 + + A M++ R SL E I YA R G L +++ IA+ + A Sbjct: 297 NLEIERVALAAMAIGLARRSLDEMIAYAGNRPAFGKPNLYGFGQIQKHIAESYAEYMAGK 356 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ANS D + Y + A K +C +M+ V A++ +GG GY+ E + Sbjct: 357 CYLYGFANSLD-------LSTYGHGLDADGVKLYCAQMSKNVADRAIQVLGGYGYVGEYT 409 Query: 430 IARHYRES 437 + R +R+S Sbjct: 410 VERLWRDS 417 >gi|195498051|ref|XP_002096360.1| GE25631 [Drosophila yakuba] gi|194182461|gb|EDW96072.1| GE25631 [Drosophila yakuba] Length = 405 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ + G + ++K+G R ++T +L F + ++ N+ P K Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKDNMLGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D+ + ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|170761146|ref|YP_001787571.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169408135|gb|ACA56546.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|117620593|ref|YP_856610.1| acyl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562000|gb|ABK38948.1| acyl-CoA dehydrogenase family member 8 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 407 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 51/315 (16%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 M+ P+V ++W P++ S E LG LTE G+D AA+ ++ Sbjct: 118 MLGSWLPPKVAEEWVPRLASGEL----------------LGSYCLTEPGAGSDAAALKTR 161 Query: 218 GQKISDG-IYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLC 271 + DG Y + G K F+S S D +++A+ G + F+VP G+ Sbjct: 162 A--VRDGEDYVIDGSKVFISGAGSTDVLVVMARTGGEGAKGISAFMVP-----AQTPGVS 214 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMS 324 Y + + K+G S T E+ FS + LG + ++ +I I A S Sbjct: 215 YGKAEEKMGWNSQPTREVNFSAVRIPARYRLGQEGEGFKFAMQALDGGRINI----ATCS 270 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-A 383 V + +L +A+ + ++R G + + ++ +AD+A ++AAA L + A D A Sbjct: 271 VGTAQQALDDALAHVQQRQQFGHPISEFQSVQFRLADMATELAAARLLVRQAAARLDAGA 330 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 +S A A+ A + C +A++ GG GYI E + R+ R++ + IL Sbjct: 331 PDKSAWCAMAKRFATDVGHRICD-------DALQLFGGYGYIREYPLERYLRDTRVHRIL 383 Query: 444 LGSGNAMVLDVLNLL 458 G+ M L + L Sbjct: 384 EGTNEVMRLIIARRL 398 >gi|222109787|ref|YP_002552051.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221729231|gb|ACM32051.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 598 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 49/348 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTDEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ + +DG Y ++G+K F+S+ + ++LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPQADGTYKITGNKIFISAGEHNFTSNIVHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + L++K+G NAT ++ G L+G+ N + M Sbjct: 235 PKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAIGTLVGEPNKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGG---------ILIDQPVMK---- 356 L S+ V+ A+ YA+ R +SG I++ V K Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVHPDVRKMLLT 354 Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A A+ A + L A+S + K R + ++ PI K + Sbjct: 355 AKAYAEGARALQIFCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITDNGHIATNAC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 M+ GG G+I+E + + R++ N I G+ LD+L G N Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNN 462 >gi|163858095|ref|YP_001632393.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163261823|emb|CAP44125.1| probable acyl-CoA dehydrogenase [Bordetella petrii] Length = 605 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 54/283 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D++ I ++ DG Y L G K F++ D ++LA+V+G Sbjct: 161 MNLTESQAGSDLSQIATRAVPQDDGSYRLFGQKIFITYGEHDFAENIVHLVLARVQGAAA 220 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ L +DG+ N + L++K+G + T L F + G Sbjct: 221 GISGLSLFVVPKYLVAQDGTLGPRNDVWCASLEHKLGIHGSPTAMLLFGD------GKGE 274 Query: 304 VSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVS 345 V G V + + I ++SA SV V++++ A+ YA+ R S Sbjct: 275 VGQGAVGHLIGEAGHGLANMFIVMNSARFSVGLQGVAISDRAFQLALGYAKERLQGKGRS 334 Query: 346 GGILIDQPVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 GG QP+ +++ + +A ATA L+ +A R+ A+ Sbjct: 335 GG---SQPIAHHPDVQRMLMTMKSLTESMRALAYATAAHQDLSVHHPDADMRARHEAFFE 391 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + P+ K +C + + V + ++ GG G+IEE A++YR++ Sbjct: 392 FLIPVLKGYCTETSLEVTSLGIQVHGGMGFIEESGAAQYYRDA 434 >gi|16124335|ref|NP_418899.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15] gi|221233017|ref|YP_002515453.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|13421179|gb|AAK22067.1| acyl-CoA dehydrogenase family protein [Caulobacter crescentus CB15] gi|220962189|gb|ACL93545.1| acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] Length = 597 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 62/347 (17%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE GTD+ + ++ +DG Y ++G K ++ Sbjct: 152 PKMVSGEWTGT-------------MNLTEPHCGTDLGLLRTKAVPQADGSYKITGQKIWI 198 Query: 236 SS---PMSDAFI--MLAQVEGR------VGCFLVPRLLE--DGS----PNGLCYQRLKNK 278 S+ M+D + +LA++EG + F+VP+ + DGS G L+ K Sbjct: 199 SAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFIPNADGSVGPRNEGAKCVGLEEK 258 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIH 337 +G NAT +++ G+L+G+ N +KI+ + ++ A + V V+ EA + Sbjct: 259 MGIHGNATCVMQYDEAVGYLIGEEN------SGLKIMFVMMNEARLGVGMQGVAQGEAAY 312 Query: 338 YA---------RRRHVSG--------GILIDQPVMKRAIADIALDIAAA------TALSF 374 A + R ++G +I P ++R + + I TAL Sbjct: 313 QAAVAFAKDRLQGRSLTGPKNAEGPADPIIVHPDVRRMLLESKALIEGGRAFLFWTALHG 372 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 L++ + R + + Y +M P+ K + V + A++ GGSG+ E +++ Sbjct: 373 DLSHVHPDPAVREKSSDYMGLMTPVLKGYLTDKGFQVCSNAVQVHGGSGFTEHFPVSQFM 432 Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQDLGSS 479 R+ I G+ LD++ L KG F ++Q +G + Sbjct: 433 RDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEIDQFIGEN 479 >gi|114047951|ref|YP_738501.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-7] gi|113889393|gb|ABI43444.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7] Length = 596 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 38/319 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ +DG + ++G K F+SS +D + +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPAADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP++L DGS N L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFAVPKVLVNSDGSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGG---------ILI 350 + M L + + ++ A+ YA+ R +SG IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGMQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + A AL + A DEA+ S+ A A + P+ K + Sbjct: 342 HGDVRRMLLSQKAFN-EGARALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFI 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462 +A + GG GYI E + + R+S I G+ LD++ LL Sbjct: 401 TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRG 460 Query: 463 NLFEQLFSTLEQDLGSSGK 481 +Q + + + + S GK Sbjct: 461 AAMQQWSALVTEFIQSQGK 479 >gi|289582550|ref|YP_003481016.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289532103|gb|ADD06454.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 379 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 45/292 (15%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + ++W PK+ + E T M ++E G+++A I + + DG Y L+ Sbjct: 105 MKEEWLPKVANGE---TASCSM----------ISEPAHGSNVAGIETVAEADGDG-YVLN 150 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G+K W + ++D +++A+ G + L + +G+ +++ NK+G R++ E Sbjct: 151 GNKMWITNGTVADVGVLMAKTSPDEGHRGITAFLVEMDTDGISTEKIDNKLGIRASDLAE 210 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE----- 334 + ++ D+ V P E++ +++ + S SV+ V A+ Sbjct: 211 V--------VVDDVRV---PEENVIGEVDKGFYQLMEFFASGRTSVASQAVGAAQGALDA 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI YA R G + + ++ +A++A + AA +L++R A + ++ + AA Sbjct: 260 AIDYAGEREQFGQKIKEFQAIEHKLAEMATRVEAARSLTYRAATEVE--QNNQDVAAQFS 317 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 MA K + ++A V E ++ GGSGY+ + R+YR++ I G+ Sbjct: 318 SMA---KLFASEIAVEVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366 >gi|239624683|ref|ZP_04667714.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47_FAA] gi|239521069|gb|EEQ60935.1| acyl-CoA dehydrogenase [Clostridiales bacterium 1_7_47FAA] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRV-GCFL 257 +TE G+D AAIT+ +K D Y L+G K F+++ P D + A+ + G Sbjct: 119 FAITEPGAGSDTAAITTTAEKDGD-YYILNGRKCFITNGPCCDFVTVFAKTDVNARGVKG 177 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + + + + G ++NK+G + T +L F N + N+ G + KI + Sbjct: 178 ISAFIVESAWEGFSTGAVENKMGMHGSPTCDLIFENV---RVPKENLLGGEGQGFKICMA 234 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS ++V+ + +A EA+ Y + R G + + IAD+A + Sbjct: 235 TLDSGRITVATQGLGIAQGALDEAVKYVKERVQFGKPIAKLQNTQFEIADMATRVECGRQ 294 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A D + S+ AA A KY+C + + +++ GG GY+++ I Sbjct: 295 LVYNAARLKDAGQPYSKNAAMA-------KYYCGDLCNNIAYRSLQLHGGYGYMKDYPIE 347 Query: 432 RHYRESPANSILLGS 446 R +R++ +I G+ Sbjct: 348 RMFRDARLVAIYEGT 362 >gi|71282509|ref|YP_268983.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] gi|71148249|gb|AAZ28722.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] Length = 606 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 45/339 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ + ++ + DG Y ++G K F+S+ D I+LA++ +G Sbjct: 165 LTEPQCGTDLGQVKTKAEPNGDGTYNITGTKIFISAGEHDLTDNIIHIVLARLPDAPKGT 224 Query: 253 VGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP++ +DG+ N + +++K+G +++AT L F N G L+G N Sbjct: 225 RGISLFIVPKVKASQDGTLGDFNNVTCGSIEDKMGIKASATAVLNFDNAVGELIGPENKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQ 352 + L +A+ V ++ ++ YA+ R V+ I++ Sbjct: 285 LECMFTFMNTARLGTALQGVCSAELAFQNSLIYAKERLSMRSLTGKKFPEQVADPIIVHP 344 Query: 353 PVMKRAIADIALDIAAATALSF--RLANSFDEAKSRSEE-AAYARI--MAPITKYWCCKM 407 V K + A+ + + ++ + AK+ E AA R+ + PI K + ++ Sbjct: 345 DVRKMLMTQKAISEGGRAMIYYTAKIVDDISMAKTEEERLAADDRLGFITPILKAFLTEL 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 ++ GG GYI+E + + R+ +++ G+ LD+L + Sbjct: 405 GSESANHGLQIFGGHGYIKEWGMEQIVRDVRISTLYEGTTGIQALDLLG---------RK 455 Query: 468 LFSTLEQDLGSSGKKVITILRDS--ISLCKEDKGLARFL 504 + T + L K+V+ +D+ IS + + RF+ Sbjct: 456 ILMTRGKSLNDFSKEVLGFCKDNSLISSNPHKRQMNRFI 494 >gi|322806444|emb|CBZ04013.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|260548811|ref|ZP_05823033.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260407979|gb|EEX01450.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 600 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGTIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|229023875|ref|ZP_04180359.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228737462|gb|EEL87973.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] Length = 583 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 41/317 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 140 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 185 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 186 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 242 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 243 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 296 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 297 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 356 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 357 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 416 Query: 452 LDVLNLLEKGTNLFEQL 468 L V +L K FEQ+ Sbjct: 417 LTVAKMLMKQ---FEQI 430 >gi|111019512|ref|YP_702484.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819042|gb|ABG94326.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 397 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 41/267 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------- 252 L+E G+D+A I+ + + D + +SG K W + +D ++ A+ + + Sbjct: 132 LSEAEAGSDVANISCRATRDGDD-WVISGTKMWCTYADEADYLVLFARTDPKKDPAKPHR 190 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLL 299 + FL+ + G P G+ +++ KIG +T EL F N GF L Sbjct: 191 GISAFLIEKQ-RGGFPVGISGTKIR-KIGYFGWSTWELSFDNFRVPATAMLGEEGKGFYL 248 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 + G +A ++ R +L ++I Y R G L D ++ I Sbjct: 249 AVSGLEVGRAH---------TAARAIGLARGALEDSIAYLHTRRQFGHELADFQHLRFKI 299 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A +A DI AA L + +A D + S EA+ +++A +MA V +EA++ Sbjct: 300 AKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKLVA-------TEMAERVTSEAVQIH 352 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY + + RH+R++ I G+ Sbjct: 353 GGAGYTTDFQVERHWRDARLTKIFEGT 379 >gi|93006279|ref|YP_580716.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92393957|gb|ABE75232.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 594 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 40/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252 LTE GTD+ I ++ DG Y +SG K F++ ++D I +LA+ EG Sbjct: 166 LTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGS 225 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L EDGS N L +++K+G +++AT + F + G+++G N Sbjct: 226 KGISLFVVPKFLVNEDGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------------HVSGGILI 350 + M I++ + M + G+ ++ A YA R +I Sbjct: 286 ---LSSMFIMMNYERVTMGLQGLGGSELAYQNAALYANDRGQGRSDTQLQSPEKPADAII 342 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 ++R + + + A+ + +A + DE K ++ AA ++ P+ K + Sbjct: 343 HHADVRRMLLNAKANTEASRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKAFL 402 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + + GG GYI E + + R++ I G+ LD+L Sbjct: 403 TDKALEATIDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLL 453 >gi|94311466|ref|YP_584676.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93355318|gb|ABF09407.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans CH34] Length = 378 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 29/298 (9%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +A + T + W P I + KT +A+ + TE GG+D+ A + Sbjct: 96 APYIARLGTEEQKQRWLPDICA-----------GKTILAVAI--TEPGGGSDVKACRTTA 142 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 + D + ++G K F+S+ SD +++ + + G V +L + + G R + Sbjct: 143 VRDGDE-WVINGSKTFISNGFCSDMVMVVCKTDPAAGARGVSLILVETNREGFRRGRKLH 201 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV-EDMKILIYLDSAIMSVSGMRVSLA 333 K+G S T EL F N G LLG++N G + D+ ++ A+ + + + L Sbjct: 202 KVGMHSQDTAELFFDNVRVPAGNLLGEVNKGFGYLMHDLAQERFI-IAVTAAAKIERLLE 260 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALD-IAAATALSFRLANSFDEAKSRSEEAAY 392 + I Y + R GG + D K +AD+ + +A T + + L S EEAA Sbjct: 261 QTIEYVKDRKAFGGTVWDFQNTKFKLADVKANAVALRTMVDYYLGEHMRRRLS-GEEAAI 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A++ A ++ C I + ++ GG GY+ E IAR + + + GS M Sbjct: 320 AKLHATEVQWKC-------IDDMVQLHGGYGYMLEYPIARAFVDMRVARVYGGSNEVM 370 >gi|323137353|ref|ZP_08072431.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] gi|322397340|gb|EFX99863.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] Length = 576 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 46/296 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+A + ++ ++ DG Y L G K F++ D ++LA++ Sbjct: 161 MNLTEPQAGSDLALLRTRAERAGDGTYRLFGQKIFITYGEHDLADNIVHLVLARLPDAPP 220 Query: 253 ----VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFG---FL 298 + FL P+ L D NG +R +++K+G + T + + + G +L Sbjct: 221 GTKGISLFLAPKFLPD--ENGAFTRRNDLRCGGVEHKLGIHGSPTCTMIYGDNGGAVAYL 278 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-------VSG 346 +G+ N + M +++A ++V V+LAE A+ +AR R V Sbjct: 279 VGEENKGLACMFTM-----MNNARLAVGLQGVALAERSTQHALAWARERKQGRAPGAVQT 333 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEA-AYARIMAPIT 400 +++ P + R + +A AA+ A+ + A + D A+ R+ EA A ++ P+ Sbjct: 334 SAIVEHPDVARMLMTMAGMTAASRAICYETAAAIDRARREKNPVRAAEAEERASLLTPVA 393 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + +A + ++ GG GY+EE A+ R++ I G+ +D++ Sbjct: 394 KAFSTDIANEATSLGVQVFGGMGYVEETGAAQLMRDARICGIYEGTNGIQAIDLVT 449 >gi|229144927|ref|ZP_04273324.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|228638649|gb|EEK95082.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] Length = 569 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR+S + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDSRISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|170755992|ref|YP_001781803.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1 str. Okra] gi|169121204|gb|ACA45040.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum B1 str. Okra] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|108800147|ref|YP_640344.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119869275|ref|YP_939227.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108770566|gb|ABG09288.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119695364|gb|ABL92437.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 399 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 20/289 (6%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S V +A + P + + + + R PT M + LG+TE G+D+A Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + ++ + D Y ++G K F++S + F+ A G G V L+ D + G Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R +K+G R + T EL F + L+G N +G ++ M+ L A+ + + Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +L A+ +AR R G L + +++ +A++A + A + + + + Sbjct: 274 AGRALDLAMSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E + MA T + C V+ EA++ GG GY+ E I RHYR+ Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375 >gi|212544850|ref|XP_002152579.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210065548|gb|EEA19642.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 426 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ + ++ G Y LSG K W +SP+SD ++ A++E G++ Sbjct: 162 FGLTEPNHGSDPGSMETVAREHPTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIK 221 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FL+ R P L +KNK R++ T ++ N +L D +GP Sbjct: 222 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPVENMLPDAEGLSGP--- 276 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G+ +L ++I AR R+ G L ++++ +AD + D Sbjct: 277 ---FTCLNSARLGIAFGVTGALEDSISRAREYALDRKQFRGNPLAKYQLIQKKLADASTD 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A D KS E M + K C A A E GG+ Sbjct: 334 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 386 Query: 426 EERSIARH 433 +E I RH Sbjct: 387 DEYHIGRH 394 >gi|182680173|ref|YP_001834319.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636056|gb|ACB96830.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 589 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 35/288 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+ + + DG Y +SG K F+SS D ++LA++ G Sbjct: 163 MALTEAQAGSDLGLLKATATPREDGSYTVSGSKIFISSGDQDLSENVIHLVLARLPGAPA 222 Query: 253 ----VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FL P+ L ED GS N + L++K+G + T + + ++ G+L+G+ N Sbjct: 223 GSRGISLFLCPKFLVNEDGSLGSRNNVNVGSLEHKMGIHAQPTCVMNYDDSQGWLVGEPN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR---HVSGGI----LIDQP 353 + M ++ + + V G+ S A YA+ R GG +I+ P Sbjct: 283 RG---LNAMFTMMNAERLFVGVQGLGLAEASYQTAASYAKERKQGRTPGGKDTTSIIEHP 339 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 +++ + I + AA AL+ A D+ K+ +EA ++ P+ K Sbjct: 340 DVRKMLLTILSFVEAARALTVFTALEMDKEKAHQDEATRKTASGLIALLTPVVKAAFTDF 399 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + +GG GYI E + R++ I G+ D++ Sbjct: 400 GFEATVLGQQVLGGHGYIREWGQEQFVRDARIAMIYEGTNGIQAQDLV 447 >gi|168179877|ref|ZP_02614541.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC 2916] gi|182669242|gb|EDT81218.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum NCTC 2916] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDYYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|163931094|pdb|2VIG|A Chain A, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931095|pdb|2VIG|B Chain B, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931096|pdb|2VIG|C Chain C, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931097|pdb|2VIG|D Chain D, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931098|pdb|2VIG|E Chain E, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931099|pdb|2VIG|F Chain F, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931100|pdb|2VIG|G Chain G, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase gi|163931101|pdb|2VIG|H Chain H, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase Length = 391 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 124 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKSI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 183 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 231 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 232 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 292 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 344 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 345 VTEMPAERHYRDARITEIYEGT 366 >gi|309776307|ref|ZP_07671295.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53] gi|308915903|gb|EFP61655.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53] Length = 379 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE GTD A + K DG Y L+G K F+++ +D +++ A + G + Sbjct: 123 FGLTEPNAGTDAAGQQTTAVKDGDG-YILNGTKIFITNAGEADVYVIFAMTDKTKGTHGI 181 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P G + + K+G R +AT EL F+N LG ++ + KI Sbjct: 182 SAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNV---RLGKEHLLGQEGKGFKI--- 234 Query: 318 LDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 A+M++ G R+ +A E + Y + R G + + +AD+ + Sbjct: 235 ---AMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLADMQVK 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA L + A ++ S EAA A++ A ++A V +A++ +GG GY Sbjct: 292 TDAARWLVYDAAMKKEKGLPYSVEAAKAKLFA-------AEVAMEVTTKAIQLMGGYGYT 344 Query: 426 EERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 RDYPVERMFRDAKITEIYEGT 365 >gi|226949464|ref|YP_002804555.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2 str. Kyoto] gi|226841710|gb|ACO84376.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum A2 str. Kyoto] Length = 377 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDHYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|28867730|ref|NP_790349.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850965|gb|AAO54044.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 601 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|15616361|ref|NP_244666.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125] gi|10176424|dbj|BAB07518.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125] Length = 379 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + + K D Y L+G K F+++ +D +++ A G + Sbjct: 123 FGLTEPSAGSDAANLKTTALKQGDH-YRLNGSKVFITNGGAADTYVVFASTNPSAGRKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + + K+G + T EL F + L+ N+ + KI + Sbjct: 182 SAFIVEKETPGFTVGKKEKKMGLHGSNTTELIFEDA---LVPKENLLGVEGDGYKIAMAN 238 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L++ + ++ + +AEA YA+ R G + Q + +AD+A + AA L Sbjct: 239 LEAGRIGIAAQSLGIAEAALEAATSYAKERKQFGKSIGQQQAIAFKLADLATQVEAAKLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A + S ++E++ A++ A K A EA++ GG GY +E + R Sbjct: 299 TYRAAQLKQQGISCAKESSMAKLFA-------SKTAMKAAIEAVQIFGGYGYTKEYPVER 351 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 352 YFRDAKVCEIYEGT 365 >gi|119504013|ref|ZP_01626094.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine gamma proteobacterium HTCC2080] gi|119460016|gb|EAW41110.1| putative acyl coenzyme A dehydrogenase (HcaD-like) protein [marine gamma proteobacterium HTCC2080] Length = 382 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 16/289 (5%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +H + SR P KA P T +G L +TE G+D+ +I + + D Sbjct: 91 IHSNIIAPYLSRHGTPEQKAHWLPRMVTGECVGALAMTEPGAGSDVQSIRTNAVRDGDE- 149 Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + L+G K F+++ + +D I+ A + G L D G + KIG ++ Sbjct: 150 WVLNGSKIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTS 209 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T L F++ LLG+ N + D L A +V+ +L + Y + Sbjct: 210 DTALLFFTDVRLPADALLGEANKGFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKE 269 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +AD+ DIA A + + SEEAA ++ + Sbjct: 270 REAFGQKIGGFQNTRFKLADVKTDIAINRAFYEKCTEKYANEDLSSEEAAMLKLAS---- 325 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 C+M V + ++C GG GY E I+R Y ++ I G+ M Sbjct: 326 ---CEMQCRVADQCLQCFGGYGYTTEYPISRFYVDARIQPIYGGTSEIM 371 >gi|56421928|ref|YP_149246.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|261420798|ref|YP_003254480.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297531593|ref|YP_003672868.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|319768468|ref|YP_004133969.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|56381770|dbj|BAD77678.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|261377255|gb|ACX79998.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297254845|gb|ADI28291.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|317113334|gb|ADU95826.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 380 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 35/297 (11%) Query: 183 YDPTNKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234 Y N+ QK A+ G L+E G+D+A++ ++ K D Y L+G K W Sbjct: 99 YKFGNEEQKQKYLRALATGEKLGAYALSEPGAGSDVASMKTRAVKDGDH-YILNGSKVWI 157 Query: 235 LSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++ +++ A + + F+V E G+P G + + + K+G RS+ T EL Sbjct: 158 TNGGEAEIYVVFAVTDPEKRHKGISAFIV----EKGTP-GFSFGKKEKKLGIRSSPTTEL 212 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343 F + + N+ E KI ++ LD ++ V +A+ A+ YA++R Sbjct: 213 IFEDC---RIPKENLLGQEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRV 269 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +I+Q + +AD+A I AA L+++ A + +A A++ A T Sbjct: 270 QFGKPIIEQQGVAFKLADMATAIEAARLLTYQAAWLESNGLPYGKASAMAKLFAGDT--- 326 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG+GY ++ + R R++ I G+ L + +L + Sbjct: 327 ----AMKVTVEAVQIFGGNGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|213967729|ref|ZP_03395876.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] gi|301382366|ref|ZP_07230784.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato Max13] gi|302130681|ref|ZP_07256671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927505|gb|EEB61053.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] gi|331015047|gb|EGH95103.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 601 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|19684166|gb|AAH25963.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo sapiens] gi|123982738|gb|ABM83110.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic construct] gi|123997405|gb|ABM86304.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [synthetic construct] gi|311349322|gb|ADP91826.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349344|gb|ADP91837.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349370|gb|ADP91850.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349376|gb|ADP91853.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] Length = 412 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKSI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|87120142|ref|ZP_01076038.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121] gi|86164844|gb|EAQ66113.1| Acyl-CoA dehydrogenase [Marinomonas sp. MED121] Length = 388 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 35/289 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + + PK+ S E+ IG L ++E G+D+ ++ + D Sbjct: 110 TQKQKETYLPKLVSGEH--------------IGALAMSEPNAGSDVVSLKLHARDEGDH- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G+K W + P ++ +++ A+ + G + + + G + +K+G R + Sbjct: 155 YVLNGNKMWITNGPDANVYVIYAKTDLHAGSKGITAFIVERDSEGFTQAQKLDKLGMRGS 214 Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 T EL F N G L G + V G ++ ++++ A + M+ ++ A+ Sbjct: 215 NTCELVFQDCKVPKENILGELNGGVKVLMGGLDYERLVL----AGGPLGIMQAAMDVAVP 270 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R R G + + +++ IAD+ + AA + + +A S D ++ ++AA + Sbjct: 271 YIRDRQQFGKAIGEFELVQGKIADMYTRMNAAKSYVYMVAMSADRGETTRKDAAGVIL-- 328 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +MA + +A++ +GG+GYI E R R++ I G+ Sbjct: 329 -----YAAEMATQIALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 372 >gi|299770613|ref|YP_003732639.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298700701|gb|ADI91266.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 600 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYAR----IMAPITKYWCCKM 407 ++ + AL++ LA D E+ + E+ ++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLE--QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q + + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIDQFIGQQQSSETLKPYLEKLAELKQQWLSLTKTIAEKAKHNPEEIGAAS 521 >gi|239609836|gb|EEQ86823.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3] Length = 428 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D +++ S + G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F++ R + P L +KNK R++ T ++ + + D+ GP Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A DE KS E M I K C A E GG+ Sbjct: 336 AAYGTLAAVQVARLNDEGKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388 Query: 426 EERSIARH 433 +E I RH Sbjct: 389 DEYHIGRH 396 >gi|5596622|gb|AAD45605.1|AF160729_1 isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana] gi|21592889|gb|AAM64839.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana] Length = 409 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K+ DG Y L+G+K W + P ++ ++ A+ + + G + Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F N F + + N+ + + +L+ Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266 Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ +++ M+ L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 267 LDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A D K ++ A + A + A V +A++C+GG+GYI E + R Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 380 LLRDAKLYEIGAGT 393 >gi|322368778|ref|ZP_08043345.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus DX253] gi|320551509|gb|EFW93156.1| acyl-CoA dehydrogenase domain protein [Haladaptatus paucihalophilus DX253] Length = 384 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/269 (21%), Positives = 129/269 (47%), Gaps = 23/269 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP+ +G ++E G+D++++++ +K D + ++G+K W + + D F+++ Sbjct: 111 APVAAGDAVMGTAISEPDTGSDVSSVSTTAEKDGDE-WVINGNKMWITNGSIGDYFVVMT 169 Query: 248 QVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + R F +++ + +G ++ K+G R++ T EL F + + + N Sbjct: 170 KTDPDADDRYAGF--SQIIVESDRDGFEADKITGKLGIRASDTAELIFDDV---RVPEEN 224 Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 V T + ++++ + D +V+ V +A+ A+ YA+ R G + D ++ Sbjct: 225 LVGTRGMGFLQLMQFFDETRTAVAAQGVGIAKGACERALDYAQEREQFGRSISDFQAIQH 284 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A++ AA L+++ A S + + +A + K + ++A EA++ Sbjct: 285 KLAEMHTKTEAARNLTYKSAWSVANGDGQLTQ------LASMAKEFSSRVAVECADEAVQ 338 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GGSGY+ + + R YR++ I G+ Sbjct: 339 IHGGSGYVNDFDVERLYRDAKITQIYEGT 367 >gi|302062363|ref|ZP_07253904.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tomato K40] Length = 601 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 52/352 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTKAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGVGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIAD 361 L +A+ ++ V+ + YAR R + +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLKYARDRLQMRSLTGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + A+ + A D + + + A M PI K + ++ Sbjct: 353 MKAFAEGTRAMVYFTAKQVDIVKYSEDPEQKKSADALLAFMTPIAKAFMTEVGFEAANHG 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 413 VQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEAL 464 >gi|284997063|ref|YP_003418830.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.D.8.5] gi|284444958|gb|ADB86460.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.D.8.5] Length = 371 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A + + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANETVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|119714508|ref|YP_921473.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119535169|gb|ABL79786.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 389 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFL 257 L+E G+D AA+ ++ ++ D Y L+G K W +D + ++A+ G + CFL Sbjct: 127 LSEPHAGSDPAAMRTRARRDGD-EYVLNGAKAWTTHGGHADFYKVMARTGDQRGDISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 VP GL ++K+G +AT + F + LLG G + +KI Sbjct: 186 VP-----ADTPGLSADPPEHKMGLTGSATATMRFDDVRIPAERLLG------GEGDGLKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LD+ + ++ + LA+ A+ YA+ R G +ID + +AD+ + + Sbjct: 235 ALAGLDAGRLGIAAVATGLAQGALDRAVAYAQERETFGRRIIDHQGLAFVLADMEAAVQS 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A + A D EA+ A+++A A V +A++ +GG GY + Sbjct: 295 ARATTLHAARLKDAGLPYGREASVAKLVA-------TDNAMRVTTDAVQVLGGYGYTRDF 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + R+ RE+ I G+ + + L++ T Sbjct: 348 PVERYMREAKVMQIFEGTNQIQRMVISRALDRST 381 >gi|295707243|ref|YP_003600318.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] gi|294804902|gb|ADF41968.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] Length = 375 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ ++ D Y L+G K F+++ +D +I+ A+ G + Sbjct: 123 LTEPSAGSDAASLKTKAERKGDH-YLLNGSKLFITNGGEADTYIVFAKTNPERGSRGMSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312 + + + G + ++K+G + TV+L F N + V PVE+ Sbjct: 182 FIVEKTMEGFSVGKDEHKMGLHGSRTVQLHFEN--------MQV---PVENRLGEEGEGF 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +I + L++ + ++ V +AE A +YA R+ G ++ Q + +AD+ + Sbjct: 231 RIAMANLNAGRIGIAAQAVGIAEGALTAAKNYANERYQFGKPILSQQGIAFKLADMETAV 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L +R A +D+ +EA+ A++ A T A V +A++ +GG GY++ Sbjct: 291 ESAKLLMYRAAFLYDQKLPCKKEASMAKLFASQT-------AMNVAIDAIQVLGGYGYMK 343 Query: 427 ERSIARHYRESPANSILLGS 446 + + R++R++ I G+ Sbjct: 344 DYPVERYFRDAKVCEIYEGT 363 >gi|301631915|ref|XP_002945040.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 389 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 29/262 (11%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVE 250 A+ L+E+ G+D AAIT+ DG + + G K W + S+ FI+ A Sbjct: 117 AVNFALSERAAGSDAAAITTTAVHEGDG-WRIRGEKCWLGNGGHSEHFIVFALTGESGAR 175 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNV 304 + F VPR S G ++K+G R T + S+ G L + Sbjct: 176 NNISAFWVPR-----STPGAAVDFYEDKMGIRGTTTTNFKLDVWRPRSSMVGSEGHGLKL 230 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + +I++ + +++ R A+ +A +R G +ID + +AD A Sbjct: 231 ALSTLTIGRIVVAAQALGIALCSYRA----AVEFATQRQTFGQAIIDHQGVGFMLADAAT 286 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++A + + A ++DE + S A A++ A + C +AM+ +GG GY Sbjct: 287 HLSATRMMVYEAAKAYDEGRDVSTLGAMAKLFASEAAHKVCD-------DAMQILGGRGY 339 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R YR+ I G+ Sbjct: 340 VKPSVVERCYRDQRITEIYEGT 361 >gi|154247194|ref|YP_001418152.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154161279|gb|ABS68495.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 596 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 33/290 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+AA+ ++ K +DG Y + G K F+S D ++LA++ Sbjct: 160 MNLTEPQAGSDLAALRAKAVKQADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPA 219 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----NTFGFLL 299 + FLVP++L + G N + +++K+G + T + F G+L+ Sbjct: 220 GTRGISLFLVPKVLVNADGSFGERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLV 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI-----LIDQ 352 G+ N + M L I V+ + A YA RR+ + G +I Sbjct: 280 GEENRGLACMFTMMNNARLAVGIQGVAVAERATQRAFAYAKDRRQGKAPGFEGSAPIIAH 339 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYWCCK 406 P +KR + + + AA A+ + A++ D A +R+ A A ++ P+ K + Sbjct: 340 PDVKRMLLTMRAETDAARAICLKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTD 399 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + V + ++ GG GY+EE A+H R++ +I G+ +D++ Sbjct: 400 IGIEVASTGVQVHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVT 449 >gi|254304392|ref|ZP_04971750.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324584|gb|EDK89834.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 636 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + K D Y L+G K F+++ +++ +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAVKEGDH-YILNGEKIFITNADVAETYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T +L F+N + N+ Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GDGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A V+ +A++ GGS Sbjct: 289 ATKLRTARFLIYSAA----ELKEHHEPYGMESAMA---KQYASDIALEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|116193399|ref|XP_001222512.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88182330|gb|EAQ89798.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 446 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 24/275 (8%) Query: 187 NKAPMQKTSVAIGLGLTEKRG---------GTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL EK G G+D+ ++ ++ +++ DG Y L+G K W + Sbjct: 160 NGSPEQKQKYLPGLISGEKVGALAMSESGSGSDVVSMRTRAKEV-DGGYILNGSKMWITN 218 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 P +D ++ A+ G + + D SP C ++L +K+G R + T EL F N F Sbjct: 219 GPDADVVVVYAKTVPDGGSKGITAFIVDTASPGFTCLRKL-DKMGMRGSNTGELVFENLF 277 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQ 352 L G V + + L+ ++S M+ +L A+ YA R G + Sbjct: 278 VPAENVLGAVNGGVRVLMEGLDLERLVLSAGPLGLMQAALDVALPYAHTRKQFGTPVAQF 337 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAV 411 +++ +AD+ + A+ A ++ A + DE R+++ A A + A C Sbjct: 338 QLVQGKLADMYTKLQASRAYTYATARAVDEQGLIRTQDCAGAILYAAERATECA------ 391 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ +GG GY+EE +R R++ I G+ Sbjct: 392 -LDAIQVLGGMGYVEEMPASRIMRDAKLYEIGAGT 425 >gi|91781939|ref|YP_557145.1| putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91685893|gb|ABE29093.1| Putative glutaryl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 396 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-RGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AEA + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364 >gi|322417928|ref|YP_004197151.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] gi|320124315|gb|ADW11875.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] Length = 582 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 23/263 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + +DG Y L+G K F++ S +D F + A+++G+ FLV Sbjct: 146 LTEPDCGSDPLSSRTTAVLSADGTHYILNGAKQFITNSSFADLFTVFAKIDGKHFSAFLV 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + E G + K+G + ++T L + LLG++ ++ + Sbjct: 206 EKGFE-----GFSVGAEEKKMGLKGSSTTPLVLQDVKVPVANLLGEVGKGHKIAFNVLNV 260 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A ++ + + ++ Y+ R G ++ D +K +AD++ I A+ ++ +R Sbjct: 261 GRLKVATQTLGMAKAAFGDSAAYSAERKQFGRVIGDFGAIKEKLADMSAAIFASESVIYR 320 Query: 376 LANSFDEAKSRSEEAA---YARIMAPI---------TKYWCCKMAPAVIAEAMECIGGSG 423 +A D + + Y R I K +C + V+ EA++ GG G Sbjct: 321 VAGLLDGQIATLDHGGPDYYERYQKAIEEFAAECAIAKVFCTEQLDFVVDEAVQIHGGYG 380 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI E ++ RHYR+S I G+ Sbjct: 381 YISEYAVERHYRDSRIQRIFEGT 403 >gi|170722319|ref|YP_001750007.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169760322|gb|ACA73638.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 595 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%) Query: 155 SVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 +T +++AL +P + +D+ K+ S E+ T + LTE + GTD+A Sbjct: 126 GLTEGAVLALHRHGSPELKRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLA 172 Query: 213 AITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFLVPR 260 + ++ + DG Y +SG K F+S ++D I L A V G + FLVP+ Sbjct: 173 LLRTRAEPQGDGSYRISGSKIFISGGDQDLTDNIIHLVLARLPDAPAGVRG-ISLFLVPK 231 Query: 261 L--LEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 DG PN L L++K+G + AT + F G+L+G+ N + M Sbjct: 232 FECAADGGPGVPNALGCGALEHKMGIKGAATCVMNFDGARGWLVGEANQGLACMFTM--- 288 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRR------------HVSGGILIDQPVMKR- 357 ++ A V + +AEA + YAR R S +I P ++R Sbjct: 289 --MNDARFQVGLQGLGIAEAAFQGGLTYARERLQSRSLAGPVAPERSADPIICHPDVRRM 346 Query: 358 -----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +++ +AA A + L + + + ++ A ++ P+ K + + V Sbjct: 347 LLTQKTLSEGCRMLAAYAAQALDLEHGAAQPEVQAAAGRRAALLIPVVKAFLTDVGQEVA 406 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ GG GYI E + + R+S + G+ LD++ Sbjct: 407 SLGVQLYGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLV 449 >gi|120555033|ref|YP_959384.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120324882|gb|ABM19197.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 382 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 34/305 (11%) Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 AL T VH D S + K P + A+G + +TE G+D+ A+ + Sbjct: 84 ALSTNVMVHSDIVAPYLSHIGNEQQKQQWLPKMVSGEAVGAIAMTEPGAGSDLQAMRTSA 143 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D Y L+G K F+++ +D I+ A+ + + G + L D S G R + Sbjct: 144 VKDGDD-YILNGSKTFITNGQHADMVIVAAKTDPKAGAKGISLFLVDTSLPGFSKGRNLD 202 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI---------MSVS 326 KIG S T EL FS D+ V + E+ + +YL + + V+ Sbjct: 203 KIGQHSGDTSELFFS--------DMRVPASALLGEEGQGFVYLMRELPRERLVIGALGVA 254 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKS 385 R SL I YA+ R + G L + IA + D +R+ +F D+ Sbjct: 255 AARGSLDMTIQYAQERELFGQKLSQLQNTRFEIARMETD--------YRINKAFVDQCIR 306 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EE A + KY +M V ++ GG GY E I+R++ ++ I G Sbjct: 307 EYEEGKLDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTTEYPISRNFIDARVQRIYGG 366 Query: 446 SGNAM 450 + M Sbjct: 367 TSEVM 371 >gi|294651448|ref|ZP_06728762.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292822694|gb|EFF81583.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 593 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 81/386 (20%), Positives = 161/386 (41%), Gaps = 55/386 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ ++ DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKI 196 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ +D ++LA+ + F+VP+ L EDGS N + +++ Sbjct: 197 FITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNPVGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F G+L+G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R +G ++P ++R + ++ + A+ A + + D K Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A + ++ PI K + A +A GG GYI E + + R+ Sbjct: 377 STDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRI 436 Query: 440 NSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKE 496 I G+ D++ +++ G + + + +D ++ + ++D ++ E Sbjct: 437 AQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI-RDFANTLDADLNFIKDATLDAATE 495 Query: 497 DKGLARFLTEKIA----LASSAAALY 518 + + +F+ E+ A +SAA Y Sbjct: 496 IEAVTQFIIEQAAENVEFPNSAAVDY 521 >gi|17647119|ref|NP_080102.1| short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Mus musculus] gi|26006698|sp|Q9DBL1|ACDSB_MOUSE RecName: Full=Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SBCAD; AltName: Full=2-methyl branched chain acyl-CoA dehydrogenase; Short=2-MEBCAD; AltName: Full=2-methylbutyryl-coenzyme A dehydrogenase; Short=2-methylbutyryl-CoA dehydrogenase; Flags: Precursor gi|12836415|dbj|BAB23646.1| unnamed protein product [Mus musculus] gi|148685767|gb|EDL17714.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_b [Mus musculus] Length = 432 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ K S Y L+G K W + ++ F++ A V+ G C Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E G + +NK+G R+++T +L F N + + N+ K Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV---KVPETNILGKIGHGYKYA 286 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + D ++ +A +A + A Sbjct: 287 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEAT 346 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ +E +GG GY ++ Sbjct: 347 RLLTYNAARLVEAGRPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 399 Query: 430 IARHYRESPANSILLGSGN 448 + + +R++ +I G+ N Sbjct: 400 VEKFFRDAKIGTIYEGASN 418 >gi|25453062|sp|Q9FS88|IVD1_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 1, mitochondrial; Short=IVD 1; Flags: Precursor gi|10129808|emb|CAC08233.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum] Length = 412 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 35/289 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + + PK+ S ++ IG L ++E G+D+ ++ + ++ DG Sbjct: 134 TPDQKQKYLPKLISGDH--------------IGALAMSEPNAGSDVVSMKCRADRV-DGG 178 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P+++ I+ A+ + G + ++E P Q+L +K+G R Sbjct: 179 YVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGITAFIIEKEMPGFSTAQKL-DKLGMRG 237 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMS---VSGMRVSLAEAIH 337 + T EL F N F + NV + + +L+ L+ +++ V M+ + I Sbjct: 238 SDTCELVFENCF---VPKENVLGQEGKGVYVLMSGLDLERLVLAAGPVGIMQACMDIVIP 294 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R+R G + + +++ +AD+ + ++ + + +A D K ++ + ++A Sbjct: 295 YVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLA 354 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++C+GG+GYI E R R++ I G+ Sbjct: 355 -------AERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAAGT 396 >gi|299532697|ref|ZP_07046085.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298719332|gb|EFI60301.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 598 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 94/401 (23%), Positives = 171/401 (42%), Gaps = 68/401 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP K + K+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258 D+ + ++ + ++DG Y ++G+K F+S+ D ++LA++ + VG F+V Sbjct: 175 DLGLLRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVV 234 Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P ++ DGS N + L++K+G NAT ++ G L+G+ N Sbjct: 235 PKFKVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQ---PVMKRAIAD 361 + + +++A + V + L E A+ YA+ R +SG D+ P++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349 Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 L A A A R ++F + K R + ++ PI K + Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465 + + GG G+I+E + + R++ N I G+ LD+L L +G L F Sbjct: 410 ATTLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 +L + L ++ G + K ++ I++ E + +F TE Sbjct: 470 GKLIAQLVEEEGVNEK--MSEFITPIAMLGEQ--MTKFTTE 506 >gi|227829855|ref|YP_002831634.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.S.2.15] gi|227456302|gb|ACP34989.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus L.S.2.15] Length = 371 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 35/262 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM K + LTE GG+DI ++ + +K +G++ + GHK W +D F+ + + Sbjct: 102 PMSKGEMIGSFALTEPSGGSDIGSMKTFAEK-RNGLWRIKGHKMWITQGLYADIFVTVTR 160 Query: 249 VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSN---TFGFLLGD 301 + F+VPR G C + K ++ GNR T E+ F + + +++G+ Sbjct: 161 TGSSRHDLSVFIVPR--------GNCVETRKIEVMGNRGTGTAEVIFHDCEVSKDYVVGE 212 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 +N V + L+ +++SG+ + LAEA +AR R G + D ++ Sbjct: 213 VNNGWNMVNSV-----LEIGRLAISGIAIGLAEAALEEALKWARSRTAFGNSIYDFQGIR 267 Query: 357 RAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD + A +++ ++N FDE +K + A ++++ I +A + + Sbjct: 268 WYFADSVAKLNAVKSMAKDVSNKFDENSKDKGVYVAMLKLLSAI-------IANETVDIS 320 Query: 416 MECIGGSGYIEERSIARHYRES 437 ++ GG GY + +I R YR++ Sbjct: 321 LQVFGGMGYAKGTTIERIYRDA 342 >gi|224368186|ref|YP_002602349.1| Acd4 [Desulfobacterium autotrophicum HRM2] gi|223690902|gb|ACN14185.1| Acd4 [Desulfobacterium autotrophicum HRM2] Length = 379 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 34/282 (12%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-P 238 + E T P+ + + LTE G+D + T+ + D Y ++G K F++S Sbjct: 103 TEEQKQTFLVPLAQGEIIGAFALTEPDAGSDPVSQTTTAVR-DDNNYVINGTKRFITSGK 161 Query: 239 MSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 S A I+ A+ + + FLV + +P GL +++K+G R++ T +L F N Sbjct: 162 NSRAVIVTAKTDETARHKGISAFLVAK----DTP-GLIVGHMEDKMGLRASDTTDLIFEN 216 Query: 294 T---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344 LLG+ + KI + LDS + ++ + +A+A + YA++R Sbjct: 217 CRVPASALLGNEG------DGFKIAMAGLDSGRIGIAAQSLGVAQAALDASVKYAKKRKQ 270 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + ++ IAD+A I AA L A+ D ++ + +A+ A++ A Sbjct: 271 FGKAIANHQGIRWQIADMATQIEAARQLVMSAASMKDRKENYTTQASMAKLFA------- 323 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +M V A A++ GG G+ ++ + R YR++ +I G+ Sbjct: 324 SEMVNQVTARAIQIHGGYGFTKDYPVERFYRDARVFTIYEGT 365 >gi|32450737|gb|AAH54428.1| Acyl-Coenzyme A dehydrogenase, short/branched chain [Mus musculus] Length = 432 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ K S Y L+G K W + ++ F++ A V+ G C Sbjct: 176 LSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITC 234 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E G + +NK+G R+++T +L F N + + N+ K Sbjct: 235 FLVDRDTE-----GFQIGKRENKMGIRASSTCQLTFENV---KVPETNILGKIGHGYKYA 286 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + D ++ +A +A + A Sbjct: 287 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEAT 346 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ +E +GG GY ++ Sbjct: 347 RLLTYNAARLVEAGRPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 399 Query: 430 IARHYRESPANSILLGSGN 448 + + +R++ +I G+ N Sbjct: 400 VEKFFRDAKIGTIYEGASN 418 >gi|31982522|ref|NP_031409.2| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Mus musculus] gi|16740777|gb|AAH16259.1| Acyl-Coenzyme A dehydrogenase, short chain [Mus musculus] gi|74151647|dbj|BAE41170.1| unnamed protein product [Mus musculus] gi|74199397|dbj|BAE33217.1| unnamed protein product [Mus musculus] gi|148687936|gb|EDL19883.1| acyl-Coenzyme A dehydrogenase, short chain, isoform CRA_a [Mus musculus] Length = 412 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ ++ D + L+G K W +S + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA R+ G L ++ +AD+AL + Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALE 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++E+A A++ A + A A+ +A++ +GG GY+ E Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMAKLAA-------SEAATAISHQAIQILGGMGYVTE 375 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 376 MPAERYYRDARITEIYEGT 394 >gi|75762983|ref|ZP_00742780.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218897304|ref|YP_002445715.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228900950|ref|ZP_04065163.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] gi|228965323|ref|ZP_04126415.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|74489529|gb|EAO52948.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543929|gb|ACK96323.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228794313|gb|EEM41827.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T04001] gi|228858648|gb|EEN03095.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] Length = 569 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPVENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|308270656|emb|CBX27267.1| hypothetical protein N47_I06870 [uncultured Desulfobacterium sp.] gi|308272123|emb|CBX28731.1| Acyl-CoA dehydrogenase [uncultured Desulfobacterium sp.] Length = 387 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256 G +TE G+D+ AI S + D + L+G K W ++ ++DA I A + G Sbjct: 123 GFAITEPDAGSDVMAIKSIAEDKGDH-WLLNGSKTWISNANVADAVIYYAYTDKAAGAKG 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L ++E + NG+ L +K+G+RS+ T E+ ++T + N+ P + KI+ Sbjct: 182 LSAFVVELKNFNGIRTTDL-DKMGSRSSPTGEIYLTDT---KVPKENIIGKPGDGTKIVF 237 Query: 317 -YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ +S + V LA+A YA R G + + + + + +I AA Sbjct: 238 GSLNQTRLSAAAGGVGLAQACLDVVTKYAMERKQFGQEIGKFQMNQDMVGQMNAEIEAAR 297 Query: 371 ALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R A + DE + E A A+ A T C A M +G GY E Sbjct: 298 FLVYRAACTKDEGNLNNGLEVAQAKYFAGETASKCANYA-------MRILGAYGYSTEYP 350 Query: 430 IARHYRESPANSILLGSGN 448 +AR+YR++P +++ GS N Sbjct: 351 VARYYRDAPTYTMVEGSAN 369 >gi|302917934|ref|XP_003052548.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733488|gb|EEU46835.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 426 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 30/278 (10%) Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 N +P QK TSV L ++E G+D+ ++ + + + DG Y L+G K W Sbjct: 142 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRTTAKAV-DGGYVLNGSKMWIT 199 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + P +D ++ A+ E + L D G R +K+G R + T EL F N F Sbjct: 200 NGPDADVIVVYAKTEPDKASKGITAFLVDTKTEGFSCARKLDKMGMRGSNTGELMFDNVF 259 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349 +LG +N G V + + L+ ++S M+ +L A+ + +R G + Sbjct: 260 VPTENILGKIN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQFGQPI 316 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMA 408 ++ +AD+ + A+ A ++ A + DE R+++ A A + + + A Sbjct: 317 AHNQFLQGKLADMYTKLQASRAYTYMTAKAVDENGLIRTQDCAGAIL-------YAAERA 369 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ +GG GY+EE +R R++ I G+ Sbjct: 370 TECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 407 >gi|261198997|ref|XP_002625900.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239595052|gb|EEQ77633.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] Length = 428 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D +++ S + G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F++ R + P L +KNK R++ T ++ + + D+ GP Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A DE KS E M I K C A E GG+ Sbjct: 336 AAYGTLAAVQVARLNDEGKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388 Query: 426 EERSIARH 433 +E I RH Sbjct: 389 DEYHIGRH 396 >gi|322434140|ref|YP_004216352.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium sp. MP5ACTX9] gi|321161867|gb|ADW67572.1| acyl-CoA dehydrogenase domain-containing protein [Acidobacterium sp. MP5ACTX9] Length = 387 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 22/254 (8%) Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLV 258 L+E G+D A+ ++ Q+ SD Y L+G K W ++ + +++ A ++ +G + Sbjct: 131 LSEAASGSDAFALQTRATQRGSD--YVLNGQKLWITNAKEAGLYLVFATLDPALGYKGIT 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 ++E G+P G + ++K+G R+++T EL F + ++G V P + KI I Sbjct: 189 GFVVEKGTP-GFSVGKKEDKLGIRASSTCELVFQDC---VVGADQVLGEPGKGYKIAIET 244 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ + + + LA A +A+ R G L++ M+ +A++A +I A + Sbjct: 245 LNEGRIGIGAQMLGLASGAWGHAAKWAKERKQFGKALVEFQAMQFQLAEMATEIEMAKLM 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D +EAA + KY ++A + A+E GGSG+++E + + Sbjct: 305 VYNAARLKDNGSEFLKEAA-------MCKYVASQVAEKTASLAVEVFGGSGFVKEFPVEK 357 Query: 433 HYRESPANSILLGS 446 YR++ I G+ Sbjct: 358 LYRDAKIGKIYEGT 371 >gi|110677891|ref|YP_680898.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] gi|109454007|gb|ABG30212.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] Length = 381 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 41/320 (12%) Query: 160 SMVALMTT------PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 +V L+TT + +D W P I + KT VA +TE GTD++ Sbjct: 86 GLVELITTLLVTHGTQAQRDMWLPDILA-----------AKTKVA--YCITEPEAGTDVS 132 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 I + + +G G W ++P++D +LA+ + G + + D +G+ Sbjct: 133 GIRTTAVRDGEGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFVVDLHADGVAR 192 Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 ++K+G R++ L F N LLG + G M ++ LD + ++ + Sbjct: 193 GPKEHKMGQRASQVGPLHFDNVTLPAHALLG----AEGRGFHM-MMSVLDKGRVGIAALA 247 Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V + + A+ YA +R + + ++ +ADIA D+ AA L+ A+ D Sbjct: 248 VGIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDIGA 307 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 ++ + A+ A MA A A+A++ GGSGYI+ + R YR++ I Sbjct: 308 DATKACSMAKCFA-------GDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQIYE 360 Query: 445 GSGNAMVLDVL-NLLEKGTN 463 G+ + + LL KG + Sbjct: 361 GTNQIQRMIIARELLAKGAD 380 >gi|332285292|ref|YP_004417203.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7] gi|330429245|gb|AEC20579.1| glutaryl-CoA dehydrogenase [Pusillimonas sp. T7-7] Length = 397 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 24/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K +DG Y +SG+K W + Sbjct: 115 FGSEEQKQKYLPKLASGAWIGCFGLTEPNHGSDPGSMETRAVKTADG-YKVSGNKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSN 293 SP++D F++ A+V G + + D GL + K+G R++ T E+ E Sbjct: 174 SPIADVFVVWAKVVGGDDDGKIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDEVEI 233 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348 + +L ++ GP L+SA ++ + AEA H AR+ R G Sbjct: 234 SAEQMLPKVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFGRP 287 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ DI A RL D+ + E + I K C A Sbjct: 288 LAQNQLIQKKLADMQTDITLALQGCLRLGRMKDDGTAAVE-------ITSIMKRNSCGKA 340 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 341 LDIARMARDMLGGNGISDEFGVARH 365 >gi|229133184|ref|ZP_04262017.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|228650273|gb|EEL06275.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] Length = 615 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 23/279 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + L+G K W ++ M+D +++ A+ + F+V Sbjct: 194 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 253 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL +++ I S AT+ LE N G V G + I Sbjct: 254 RTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 304 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 305 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIISTYGAESA 364 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 365 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 424 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 + R YR++ + I G+ L V +L K E Sbjct: 425 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQIEQIE 463 >gi|15230664|ref|NP_190116.1| IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA dehydrogenase [Arabidopsis thaliana] gi|110816334|sp|Q9SWG0|IVD_ARATH RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; Flags: Precursor gi|4995051|emb|CAA73227.1| Isovaleryl-CoA Dehydrogenase [Arabidopsis thaliana] gi|6967096|emb|CAB72479.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana] gi|110738147|dbj|BAF01005.1| isovaleryl-CoA-dehydrogenase precursor [Arabidopsis thaliana] gi|332644499|gb|AEE78020.1| isovaleryl-CoA-dehydrogenase [Arabidopsis thaliana] Length = 409 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K+ DG Y L+G+K W + P ++ ++ A+ + + G + Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F N F + + N+ + + +L+ Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266 Query: 318 --LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ +++ M+ L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 267 LDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A D K ++ A + A + A V +A++C+GG+GYI E + R Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 380 LLRDAKLYEIGAGT 393 >gi|21230969|ref|NP_636886.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769029|ref|YP_243791.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|21112588|gb|AAM40810.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574361|gb|AAY49771.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] Length = 382 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D + G + + K+G R++AT E+EF++ ++ V E K + Sbjct: 183 TAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVLGAEGEGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A+++A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLIASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|327438662|dbj|BAK15027.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 380 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 36/317 (11%) Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 A L +G + + + + A T + K W PK + EY + +T Sbjct: 80 AGLASGISLHSDIVTPYIEAYGTAAQKEK-WLPKSVTGEYISA-------------IAMT 125 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL--VPR 260 E G+D+A I + +K D Y L+G K F+++ + +D +++ + + + + Sbjct: 126 EPGAGSDLAGIQTTAKKDGD-FYILNGEKTFITNGIHADYVVVVCKTDPQASPAYKGISL 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMK 313 L+ + G + +KIG S T EL F + LLG+ N ++ + Sbjct: 185 LIVESGTAGFKRGKKLDKIGMHSADTGELIFEDVRVPAENLLGEENRGFYYLMEKLQQER 244 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +++ L++ I + ++++ + Y + R G + D + +A++A +I Sbjct: 245 LIVALETQIEAECCLKLT----VDYVKERKAFGSRIADFQNTQFKLAEMATEIDLGRTYV 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L + +E + A K+W +MA V+A+ ++ GG GY+EE IAR Sbjct: 301 DSLIAKHIAGQDIVKEVSMA-------KWWISEMAKRVVADCLQLHGGYGYMEEYEIARR 353 Query: 434 YRESPANSILLGSGNAM 450 YR+ P +I G+ M Sbjct: 354 YRDIPVAAIYAGTTEIM 370 >gi|262374895|ref|ZP_06068129.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145] gi|262309908|gb|EEY91037.1| acyl-CoA dehydrogenase A [Acinetobacter lwoffii SH145] Length = 593 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 47/316 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ ++ DG Y +SG K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYSISGTKI 196 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ D ++LA+ + F+VP+ L EDGS N + +++ Sbjct: 197 FITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNEDGSIGERNPVGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F G+L+G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R +G ++P ++R + ++ + A+ A + + D K Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A + ++ PI K + A +A GG GYI E + + R+ Sbjct: 377 STDPEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGLEQCIRDLRI 436 Query: 440 NSILLGSGNAMVLDVL 455 + I G+ D++ Sbjct: 437 SQIYEGTNGVQSQDLI 452 >gi|119476267|ref|ZP_01616618.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119450131|gb|EAW31366.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 561 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 55/335 (16%) Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 AG L++ +A + TP + W P++ S E T AI + TE Sbjct: 247 AGSLITRPEIAARALLKGGTPAQQQQWLPRLASAE-----------TLCAISI--TEPDF 293 Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-------FLVP 259 G+D+A+I+ + +G + L+G K W + ++ + LA+ + G FLV Sbjct: 294 GSDVASISLKATPTENG-WLLNGSKTWCTFAGQAELLVTLARTDTDSGLGFKGLSMFLVE 352 Query: 260 RLLEDG------SPNGLCYQRLKNK----IGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + G P G RL K IG R + +L F + F + + N+ G Sbjct: 353 KPAFSGHQFDYQQPQG---GRLIGKSISTIGYRGMHSFDLFFEDYF---VAENNLVGGEE 406 Query: 310 EDMKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 K + + +A + M+ + +A+ YAR R V + + + + +A Sbjct: 407 GKGKGFYFTMAGLSGGRIQTAARATGVMQAAFEQAVSYARERKVFAKPIGEYQLTQVKLA 466 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 + I A+ S+ +A D+ K + E A + K + C+ A V EAM+ G Sbjct: 467 RMLAAITASRQFSYAVARMMDDGKGQME--------ASLVKLFSCRSAEWVTREAMQIHG 518 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G GY EE +++R++ ++ SI G+ + L V+ Sbjct: 519 GMGYAEETAVSRYFVDARVLSIFEGAEETLALKVI 553 >gi|40063113|gb|AAR37960.1| acyl-CoA dehydrogenase [uncultured marine bacterium 561] Length = 382 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 16/289 (5%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +H + SR P KA P T +G L +TE G+D+ +I + + D Sbjct: 91 IHSNIIAPYLSRHGTPEQKAHWLPRMVTGECVGALAMTEPGAGSDVQSIRTNAVRDGDE- 149 Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + L+G K F+++ + +D I+ A + G L D G + KIG ++ Sbjct: 150 WVLNGSKIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDAHAPGFEKSKKIEKIGQHTS 209 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T L F++ LLG+ N + D L A +V+ +L + Y + Sbjct: 210 DTALLFFTDVRLPADALLGEANKGFAILMDELPRERLGIAAQAVAASEGALDVTVEYVKE 269 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +AD+ DIA A + + SEEAA ++ + Sbjct: 270 REAFGQKIGGFQNTRFKLADVKTDIAINRAFYEKCTEKYANDDLSSEEAAMLKLAS---- 325 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 C+M V + ++C GG GY E I+R Y ++ I G+ M Sbjct: 326 ---CEMQCRVADQCLQCFGGYGYTTEYPISRFYVDARIQPIYGGTSEIM 371 >gi|264679027|ref|YP_003278934.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262209540|gb|ACY33638.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 596 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 158/334 (47%), Gaps = 55/334 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDALKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + DG Y + G K F++ M+D + +LA+V G + F+V Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P+ L +DGS N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDNGGAIGYLVGEENRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI-----LIDQPVMKRA 358 M I++ + + G+ V+ A+ YA+ R V G + +I P ++R Sbjct: 288 YMFIMMNAARYAVGLQGLAVAERAYQHAVAYAKERVQSRPVDGSVKASATIIHHPDVRRM 347 Query: 359 IADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + +A A A ++ A+ +A+ R + M P+ K + +M+ V Sbjct: 348 LMTMRASNEGCRAMATAAAAAYDAAHHHPDAEVRQANQTFYEFMVPLVKGYSTEMSLEVT 407 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 SLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 441 >gi|196009394|ref|XP_002114562.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens] gi|190582624|gb|EDV22696.1| hypothetical protein TRIADDRAFT_58518 [Trichoplax adhaerens] Length = 370 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ Q + ++DG + L+G K W +S +D F++ A G Sbjct: 114 LSEFGSGSDAFAL--QTRAVADGDHFVLNGTKAWISNSEHADIFLVFANASPEKGYKGIT 171 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CF+V R + GL + ++K+G R+++T + N + + N+ E KI Sbjct: 172 CFIVERNMP-----GLSLGKKEDKLGIRASSTCPVILENV---RVPESNIMGKFGEGYKI 223 Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I L+ +S++ V LA+ AI Y R + D ++ IA+++ +AA Sbjct: 224 AIGILNEGRISIASQMVGLAQGALDAAIPYTMERKQFNQRIFDFQGVQHQIAEMSTMVAA 283 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A+++ A K +E A A KY+ +MA V ++A+E +GG G+ ++ Sbjct: 284 ARAITYDAARLKVAGKPVVKEGAMA-------KYFASEMAQKVSSKALEWLGGVGFTKDF 336 Query: 429 SIARHYRESPANSILLGSGN 448 + + YR++ I GS N Sbjct: 337 PVEKFYRDAKIGVIYEGSSN 356 >gi|302550362|ref|ZP_07302704.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302467980|gb|EFL31073.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 383 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 53/306 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + + W P + S E A+G GLTE G+D + ++ Sbjct: 95 AKTVAAWGSEEQRRRWLPGLTSGE--------------AVGCFGLTEPGTGSDAGNLATR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y ++G K F+++ +D ++ A+ G FLVP G+P GL Sbjct: 141 AVRDGDD-YVINGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVP----TGTP-GLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI----MSV 325 + + K+G R AT EL +L D+ V + ++ K SA+ MSV Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRVPASALLGQEGKGFSIAMSALAKGRMSV 246 Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ Sbjct: 247 AAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIAVDVDAARLLTWRVADLI 306 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D +S + E++ A++ A + A A++ GG GYI+E + R++ Sbjct: 307 DRGQSFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVM 359 Query: 441 SILLGS 446 ++ G+ Sbjct: 360 TLYEGT 365 >gi|324515384|gb|ADY46184.1| Short/branched chain specific acyl-CoA dehydrogenase [Ascaris suum] Length = 420 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 24/268 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ + +K D Y ++G K W ++ + FI++A V+ +G + Sbjct: 161 LSESTSGSDAFALKTTAKKDGDD-YVITGSKMWTSNAANAHFFIVMANVDPSMGYKGITT 219 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 L D G+ + ++K+G R+++T + F + +LG++ KI I Sbjct: 220 FLVDRHLKGVEVGKKEDKLGIRASSTCPVHFDDVRVNKDMVLGEVG------NGYKIAIE 273 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L++ + + V LAE I Y + R +ID ++ IADIA I A Sbjct: 274 CLNAGRIGIGAQMVGLAEGCFEATIPYLQERKQFNKRIIDFQGIQHQIADIATQIETARL 333 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + + +EAA A K++ +A ++ +E +GG G+ + + Sbjct: 334 LVYNTARMKEASIDYVKEAAMA-------KWYSSVVATNTTSKCIEWMGGVGFTKSYPVE 386 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLE 459 ++YR+ +I G+ N + + L++ Sbjct: 387 KYYRDCKVGTIYEGTSNIQLNTIAKLID 414 >gi|289674344|ref|ZP_06495234.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. syringae FF5] Length = 592 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSVGERNAVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYA------------RRRHVSGGILIDQ 352 + M L I + SG+R S A+ YA + + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++ A R ++ P++K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N Sbjct: 405 IGLETTIHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAL 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|170726269|ref|YP_001760295.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811616|gb|ACA86200.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC 51908] Length = 596 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 39/303 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247 + LTE GTD+A + ++ +G + +SG K F+SS +++ I L A Sbjct: 162 MNLTESHAGTDLALLRTKAVDAGEGFFAISGEKIFISSGDHDLAENIIHLVLARLPDAPA 221 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + F VP+ L +DGS N LC L++K+G N+T + F G L+G+ Sbjct: 222 GVKG-ISLFAVPKYLVNDDGSIGDANKLCATGLEHKMGIHGNSTCVMNFDGALGELVGEP 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPVM 355 + + M L + + ++ A+ YA+ R G+ + P++ Sbjct: 281 HQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALIYAKGRIQGRGLSGVKAPEMAADPIL 340 Query: 356 -----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 ++A + A + AL A + E + A + PI K + Sbjct: 341 VHGDVRRMLMSQKAFNEGARAMMGQQALWLDKAERHSNPEKAKEASKLAALFTPIVKGFV 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 +A + GG GYI E + + R+ I G+ LD++ L +KG Sbjct: 401 TDRGFNACVDAQQVFGGHGYIHEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKILSDKG 460 Query: 462 TNL 464 L Sbjct: 461 AAL 463 >gi|329888448|ref|ZP_08267046.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] gi|328847004|gb|EGF96566.1| acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas diminuta ATCC 11568] Length = 387 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 30/276 (10%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248 +Q + + +TE G+D+ + + K D Y L+G K F+++ FI++ Sbjct: 122 LQSGELVGAIAMTEPGAGSDLQGVKTTAVKQGDH-YVLNGSKTFITNGQLANFIIVVAKT 180 Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303 EG G L+ LE G R +KIG +N T EL F++ ++GD Sbjct: 181 DPAEGAKGTSLI--CLETDGAEGFERGRNLHKIGMEANDTSELFFNDVKVPLENVIGDTE 238 Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G V+ M+ L L+ A+ V+ L + Y + R G +ID + +A+ Sbjct: 239 -GQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLAYVKERKAFGKRVIDFQNTQFKLAE 297 Query: 362 IALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 I + A + L D A A + KYW + I E + Sbjct: 298 IKTKLTVAKVFVDHCIGLHLKGQLDAA------------TASMAKYWVTDIQGETIDEML 345 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + GG GY+ E IA+ Y+++ I G+ M L Sbjct: 346 QLFGGYGYMTEYPIAQLYKDARVQRIYGGTNEIMKL 381 >gi|300310260|ref|YP_003774352.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300073045|gb|ADJ62444.1| acyl-CoA dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 382 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 34/303 (11%) Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A T V A I + PT K P+ + + LTE G+D AAI ++ Sbjct: 80 ATSTIVSVQNSLACGITEKYGSPTQKEQWLKPLARGEMLGCFCLTEPHTGSDAAAIRTRA 139 Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCY 272 ++ D + L+G K F++S ++ V R + CFLVP G Sbjct: 140 ERDGDD-FILNGTKQFITSGKHAGVAIVFAVTDRSAGKKGISCFLVP-----CDTPGFVV 193 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSV 325 R + K+G ++ TV++ N LLG ++ +E +I I A SV Sbjct: 194 GRSEEKMGQHASDTVQIMLDNCRVPATALLGKEGEGYRIALSNLEAGRIGI----AAQSV 249 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 R + A+ YAR+R G +I+ + +AD+ + AA + +R A D+ + Sbjct: 250 GMARAAFEAAVSYARQRESFGVPIIEHQAVNFRLADMNTLLDAARLMVWRAAQLKDQGRP 309 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 +EA+ A++ A + A + ++A++ GG GY + + R YR+ I G Sbjct: 310 CLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIYEG 362 Query: 446 SGN 448 + + Sbjct: 363 AND 365 >gi|293606863|ref|ZP_06689211.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292814715|gb|EFF73848.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 391 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 20/260 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + ++E G+D+ ++ + + D +Y ++G K F+++ + +D ++A+ + G G Sbjct: 133 IAMSEPGAGSDLKSVRTTAARDGD-VYVINGSKTFITNGLHADLICVVAKTDPSAGTRGV 191 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L+ ++E G +L K+G +S T EL F + LLG+ G + M Sbjct: 192 SLI--MVETLDLPGFRRGKLLEKLGQKSLDTAELFFDDVRVPVANLLGEAE-GQGFTQLM 248 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L L A+ +V+ MR ++ + + Y + R V G LID + + +A Sbjct: 249 QQLPRERLLIAVGAVATMRRAIDDTVAYTKTRQVFGQALID-------LQNTRFKLAECE 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ A D+ +R + A + K+W +M VI E ++ GG GY+ E I Sbjct: 302 TIATIAARFVDDCIARQLQGTLDLSTAAMAKWWTTQMNCQVIDECLQLHGGYGYMLETPI 361 Query: 431 ARHYRESPANSILLGSGNAM 450 AR Y ++ I GS M Sbjct: 362 ARMYADARVGKIYGGSNEIM 381 >gi|156740271|ref|YP_001430400.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231599|gb|ABU56382.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 383 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 33/267 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A T ++ +G + ++G K W S+ ++ I+ A + + Sbjct: 125 LTEPHAGSDAGA-TRTTARLENGEWVINGAKMWITSASIAGHLIVTAVTDPGERHAISAI 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 +VP G+P GL + + + K+G R + T + F N LLG + Sbjct: 184 IVP----AGTP-GLSFGKPEPKMGLRGSITNAVTFENVRVPEANLLGRRGRGL-----QQ 233 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LD + + M + LA+A YAR R G ++ + IAD+A+ + A Sbjct: 234 FLAVLDGGRIGIGAMAIGLAQAAFEVASAYARERTAFGKLIGAYESVSNMIADMAVGLEA 293 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A D+ + S EAA A++ A C+ +A++ +GG GY E Sbjct: 294 ARLLVYQAAWLKDQGRQYSREAAIAKLYASEVGEKICR-------DAIQVLGGYGYSSEY 346 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455 + R YR+ + +G G + +L V+ Sbjct: 347 PLERIYRDQ--RLLTIGEGTSEILRVV 371 >gi|70730430|ref|YP_260171.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68344729|gb|AAY92335.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 375 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ ++ D Y L+G K F++S + +++ V Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARRDGDH-YVLNGCKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 G+ G F+VP SP G R+++K+G ++ T ++ F +N G Sbjct: 170 TDPAAGKRGISAFIVP----TDSP-GYKVARIEDKLGQHASDTCQILFEDVKVPLANRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E ++ I A SV R + A YAR R G +I+ + Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERETFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D K A + A + K + +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKP-------ALVEASMAKLFASEMAEKVCSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLSDFPVERIYRDVRICQIYEGTSD 365 >gi|294626169|ref|ZP_06704775.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667554|ref|ZP_06732769.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599521|gb|EFF43652.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292602674|gb|EFF46110.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 597 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 81/356 (22%), Positives = 151/356 (42%), Gaps = 58/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y+R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|257066844|ref|YP_003153100.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798724|gb|ACV29379.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM 20548] Length = 379 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 36/275 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 LTE GTD + GQK DG Y L+G K F+++ +D +++ A + G Sbjct: 122 FALTEPDAGTD-----ASGQKTVAKLDGDHYVLNGSKIFITNAGYADTYVVFAMTDKEQG 176 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312 + + + G + +++K+G + ++T+EL F D V + E+ Sbjct: 177 TRGISAFIVEKGMEGFDFGTVEDKMGIKGSSTMELIFR--------DCKVPKENLLGEEG 228 Query: 313 KILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 K Y LD + ++ + +AE A+ Y + R+ G L + +A++A Sbjct: 229 KGFKYAMQTLDGGRIGIAAQALGIAEGALDKAVKYVKERNQFGRPLAKFQNTQFKLAEMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +DI +A L ++ A D +S + AA A++ A ++A V +A++ +GG G Sbjct: 289 IDIESARHLVYKAATLKDAGESYTVAAAEAKLKAS-------RVAMDVTTKAVQLLGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 YI+E + R R++ I G+ M++ V L Sbjct: 342 YIKEYEVERMMRDAKITEIYEGTSEVMLMVVSGAL 376 >gi|114766433|ref|ZP_01445402.1| acyl-CoA dehydrogenase family protein [Pelagibaca bermudensis HTCC2601] gi|114541374|gb|EAU44422.1| acyl-CoA dehydrogenase family protein [Roseovarius sp. HTCC2601] Length = 593 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 88/394 (22%), Positives = 157/394 (39%), Gaps = 72/394 (18%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 148 YLPKMVSCEWGGT-------------MNLTEPHCGTDLGLIKTKAEPQEDGTYKITGSKI 194 Query: 234 FLSSPMSDAF-----IMLAQVEG------RVGCFLVPRLLED-----GSPNGLCYQRLKN 277 ++S+ D ++LA++ G + F+VP+ + + G N + L++ Sbjct: 195 WISAGEHDMVDNIIHLVLAKIPGGPEGVKGISLFIVPKFMVNADGSRGDRNAVSCGGLEH 254 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + + GFL+G+ + + M L + + V+ A+ Sbjct: 255 KMGIHGNATCVMNYDGATGFLVGEAHKGMRAMFTMMNEARLGVGLQGYAQGAVAYQNALG 314 Query: 338 YARR----RHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +A+ R V+G ++ P ++R + D A A F A+ D+A Sbjct: 315 FAKDRLQGRDVTGAKNPEGPADSIMVHPDVRRNLMDQKALTEGARAFVFWGASLIDQAHR 374 Query: 386 RSEEAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 ++ A I + P+ K + A + +GGSG+ E + + R++ I Sbjct: 375 SGDKDAEGLISLLTPVIKGFLTDKGFETAVLAQQTLGGSGFTREWGLEQFVRDARITMIY 434 Query: 444 LGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL--- 500 G+ LD++ L QD GK V+ E KG Sbjct: 435 EGTNGIQSLDLVG-------------RKLAQD---GGKHVMAFFDMVKRFIAEHKGQDEA 478 Query: 501 --ARFLTEKIALASSAAALYRAGMNDIADVFLEN 532 A+FL L +++ L +AGM F++N Sbjct: 479 FDAQFLE---PLKAASKDLQQAGM-----FFMQN 504 >gi|326403749|ref|YP_004283831.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|325050611|dbj|BAJ80949.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 386 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 22/247 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A++T++ ++ + Y L+G K +++ +P + F ++A+ G + F Sbjct: 124 LTEPDAGSDAASLTTRAERDGED-YILNGAKRYITNAPRAGGFTLMARTGGPGASGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKIL 315 +VP GL R K+G R T ++ N + N+ G P + + Sbjct: 183 IVP-----ADTPGLKLGRPDRKMGQRGTKTCDVILENA---RVPAANIIGGVPGQGFRTA 234 Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + +A EAI YAR R G + + +++ +AD +++A Sbjct: 235 MKVLDRGRLHIAAVACGMARRLQDEAIAYARERRQFGRPIGEFQLVQAMLADSEAELSAG 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL +A ++D+ ++ A + A K +C +M V A++ GG+GY+ E Sbjct: 295 WALVRDIARAYDD-RAAGAPVADLPMRASCAKMFCTEMVGRVADRAVQVHGGAGYMAEYK 353 Query: 430 IARHYRE 436 + R YR+ Sbjct: 354 VERFYRD 360 >gi|169796349|ref|YP_001714142.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213156915|ref|YP_002318960.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215483810|ref|YP_002326035.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|239503638|ref|ZP_04662948.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] gi|260553748|ref|ZP_05826019.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|332851995|ref|ZP_08433862.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332871726|ref|ZP_08440186.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] gi|169149276|emb|CAM87159.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213056075|gb|ACJ40977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213988607|gb|ACJ58906.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|260405148|gb|EEW98647.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|322508023|gb|ADX03477.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323517609|gb|ADX91990.1| acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332729572|gb|EGJ60910.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332731294|gb|EGJ62591.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] Length = 384 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|145588701|ref|YP_001155298.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047107|gb|ABP33734.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 595 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 155/336 (46%), Gaps = 60/336 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T +P + + + P + S E+ + + LTE + G+ Sbjct: 126 LCPMLTDGAIEALLTAASPELLERFVPNMISGEWTGS-------------MCLTEPQAGS 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++ + ++ +G Y + G K +++ D ++LA+ EG G F+V Sbjct: 173 DLSMVRARAVPEGNGAYKIFGTKIYITYGEHDMAKNIVHLVLARTPDAPEGVKGISLFVV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L + G N + +++K+G +++ T L+F + G+L+G+ N +E Sbjct: 233 PKFLVNADGSLGDRNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGYLVGEENRG---LE 289 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQPVMKR 357 M + +++A +V +++AE A+ YA+ R S + +I QP +KR Sbjct: 290 YM--FVMMNAARFAVGMQGIAVAERAYQKAVQYAKDRVQSRDLAGSPGPVAIIHQPDVKR 347 Query: 358 AIADI-------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + + A A DEA ++ +A Y + PI K + +M+ Sbjct: 348 MLMTMRAYTEASRALAYYAAAAYDAQHADPDEAVKKANQAIY-EFLVPIVKGFSTEMSIE 406 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A+HYR++ +I G+ Sbjct: 407 VASLGVQVHGGMGFIEETGAAQHYRDARILTIYEGT 442 >gi|77456345|ref|YP_345850.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77380348|gb|ABA71861.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 393 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A+ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKV-DGGYSLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 + D+ GP L+SA +S + AE A Y R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 336 SLEIARMARDMLGGNGISDEFGVARH 361 >gi|332876399|ref|ZP_08444168.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] gi|332735409|gb|EGJ66467.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] Length = 384 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|302561497|ref|ZP_07313839.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302479115|gb|EFL42208.1| butyryl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 384 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 44/302 (14%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + + W P + S Y +G GLTE G+D +T++ Sbjct: 95 AKTVAAWGSEEQKRAWLPGLTSGGY--------------VGCFGLTEPGTGSDAGNLTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + G Y ++G K F+++ +D ++ A+ G V L GL + L Sbjct: 141 AVRDGGGGYVVNGTKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPADTPGLTRRALH 200 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329 K+G R AT EL +L D+ V GP E + + + MSV+ Sbjct: 201 GKLGLRGQATAEL--------VLEDVRVPASAMLGP-EGKGFSVAMSALAKGRMSVAAGC 251 Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ D + Sbjct: 252 VGIAQAALDAAVRYAGEREQFGKAIARHQLVQELISDIAVDVDAARLLTWRVADLVDRGR 311 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + E++ A++ A + A A++ GG GYI+E + R++ ++ Sbjct: 312 PFAVESSKAKLFA-------SEAAVRAANSALQVFGGYGYIDEYPAGKLLRDARVMTLYE 364 Query: 445 GS 446 G+ Sbjct: 365 GT 366 >gi|126642910|ref|YP_001085894.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 562 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 128 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 187 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 188 KGISLFIVPKFNVNADGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 247 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 248 LNCMFTFMNTARIGTAVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 307 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 308 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 367 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 368 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 415 >gi|111334|pir||B30605 acyl-CoA dehydrogenase (EC 1.3.99.3) precursor, short-chain-specific - rat Length = 412 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R+++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|146280837|ref|YP_001170990.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145569042|gb|ABP78148.1| glutaryl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 393 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 44/275 (16%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCL 228 + + PK+ S EY IG GLTE G+D ++ ++ +K+ DG Y L Sbjct: 120 TRQKYLPKLASGEY--------------IGCFGLTEPNHGSDPGSMVTRAKKV-DGGYRL 164 Query: 229 SGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 SG K W +SP++D F++ A+ + G + F++ + E GL + K+G R++ T Sbjct: 165 SGSKMWITNSPIADVFVVWAKDDAGEIRGFVLEKGWE-----GLSAPTIHGKVGLRASIT 219 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHY 338 E+ N F D+ GP L+SA +S + AE A Y Sbjct: 220 GEIVMDNVFCPEENAFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G L ++++ +AD+ +I A RL DE + E + Sbjct: 274 VLDRQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITS 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + K C A V A + +GG+G +E +ARH Sbjct: 327 LMKRNSCGKALDVARMARDMMGGNGISDEFGVARH 361 >gi|116327038|ref|YP_796758.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332303|ref|YP_802021.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119782|gb|ABJ77825.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125992|gb|ABJ77263.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 387 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 20/283 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM + +TE G+D+AAI + +K+ D Y ++G K W ++ +D +LA+ Sbjct: 112 PMTEEFKLAAYAVTEPGAGSDVAAIRTSAKKVGDE-YIINGSKMWITNAGYADWLFVLAK 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301 + G + + D G+ + + +G + + T + F + G Sbjct: 171 TDPSAGHKGITGFIVDAKSPGIIVGKKEINMGQKCSDTRAITFEDVKVPSWQMIGREGEG 230 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ G + + + AI +V R ++ +++YA R G ++D + IA+ Sbjct: 231 FKIAMGAFDRTRPGV----AIGAVGVARAAMEHSVNYANTRSTFGRPIMDNQGISFMIAE 286 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A DI A L ++ A D + +A+ I K +C M V +A++ +GG Sbjct: 287 MARDIEAGRLLCYQAAWIIDNGFRNTYQAS-------IAKMFCADMCMKVCTDAVQVLGG 339 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G+ E + + R++ I G+ + V L G + Sbjct: 340 YGFNTEYPVEKLMRDAKIFQIYEGTSQIQRMIVSRFLADGKGI 382 >gi|260555418|ref|ZP_05827639.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411960|gb|EEX05257.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 384 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|265765878|ref|ZP_06093919.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16] gi|263253546|gb|EEZ25011.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_16] Length = 567 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + D + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + ++ + + A+ Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L + A D K+ R+E+ +A++ P+ K + A Sbjct: 347 SLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++++ + R YR+S SI G+ V+ + + G L Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457 >gi|262371684|ref|ZP_06064963.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter junii SH205] gi|262311709|gb|EEY92794.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter junii SH205] Length = 593 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 101/482 (20%), Positives = 195/482 (40%), Gaps = 60/482 (12%) Query: 71 QELARMANYNTPQLHAYG-PGGERWDKVE-FHPAWHALLRRSIHDGLHCSIW-DRSFEPV 127 +E+A+ A T L+ G G RW+ E F PA R +G + D + Sbjct: 44 EEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKDAFRQYAEGGWIGLGADEEWGGQ 103 Query: 128 VRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDP 185 + + A + L+ P ++ + +AL + + + + PKI+S E+ Sbjct: 104 AMPKMLTVLADEMLFATN--PSFLLYPLLSVGAGMALNSYASQEQKETYLPKIYSGEWSG 161 Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241 T + LTE GTD+ I ++ ++ DG Y ++G K F++ D Sbjct: 162 T-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKIFITGGDHDLAEN 208 Query: 242 -AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVEL 289 ++LA+ + F+VP+ L EDGS N + +++K+G +++AT + Sbjct: 209 IIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGAGSIEHKMGIKASATCVM 268 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVS 345 F GFL+G N + M L I + + A YA + R S Sbjct: 269 NFDGAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQYATDRLQGRSAS 328 Query: 346 G---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 G IL+ V +R + ++ + A+ A + + D K ++ A + Sbjct: 329 GVQSPSKPADSILVHGDV-RRMLLNVRANNEASRAFAVYVGQQLDITKFSTDAEAVKKAN 387 Query: 395 ----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ PI K + A +A GG G+I E + + R+ I G+ Sbjct: 388 DRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGFIREWGMEQCIRDLRIAQIYEGTNGVQ 447 Query: 451 VLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKEDKGLARFLTEK 507 D++ +++ G + + + +D ++ + ++D ++ E + + +F+ E+ Sbjct: 448 SQDLIGRKVIKNGGAFIAEYIAEI-RDFANTLDADLNFIKDATLDAATEVEAVTQFIIEQ 506 Query: 508 IA 509 A Sbjct: 507 AA 508 >gi|213586532|ref|ZP_03368358.1| isovaleryl CoA dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 119 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 5/116 (4%) Query: 97 VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV 156 V FHPAWH L++ + +H W+ R + RAAR L AQ+EAG L ++ Sbjct: 7 VRFHPAWHLLMQGLCANRVHYLAWEEE----ARAGSFVARAARFVLHAQVEAGTLCPVTM 62 Query: 157 T-SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 T +A+ + L P DW + S YD QK + IG+G+TEKRG D+ Sbjct: 63 TFAATPLLLQMLPATFHDWLAPLRSDRYDSHLLPGGQKRGLLIGMGMTEKRGRIDV 118 >gi|75061870|sp|Q5RAS0|ACADS_PONAB RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor gi|55728802|emb|CAH91140.1| hypothetical protein [Pongo abelii] Length = 412 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|186477187|ref|YP_001858657.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184193646|gb|ACC71611.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 396 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 18/240 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ DG Y LSG K W +SP++D F++ AQ+E + Sbjct: 137 FGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGAKMWITNSPIADVFVVWAQLETDGKDEIR 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +LE G GL + K+G R++ T E+ F + + N+ G L Sbjct: 196 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPEENLMPGVKGLRGPFTCL 251 Query: 319 DSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +SA ++ + AE+ H AR+ R G L ++++ +AD+ +I Sbjct: 252 NSARYGIAWGALGAAESCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGV 311 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL DE + E + I K C A + A + +GG+G +E +ARH Sbjct: 312 LRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVARH 364 >gi|53714660|ref|YP_100652.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46] gi|60682673|ref|YP_212817.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343] gi|253565164|ref|ZP_04842620.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5] gi|52217525|dbj|BAD50118.1| acyl-CoA dehydrogenase [Bacteroides fragilis YCH46] gi|60494107|emb|CAH08899.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis NCTC 9343] gi|251946629|gb|EES87006.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_2_5] gi|301164151|emb|CBW23707.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 638R] Length = 567 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + D + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + ++ + + A+ Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L + A D K+ R+E+ +A++ P+ K + A Sbjct: 347 SLLYETARFVDVYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++++ + R YR+S SI G+ V+ + + G L Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457 >gi|294341456|emb|CAZ89873.1| Short-chain specific acyl-CoA dehydrogenase (SCAD) (Butyryl-CoA dehydrogenase) [Thiomonas sp. 3As] Length = 375 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLA 247 P+ + LTE + G+D + + + + D Y L G K F++S + A +M A Sbjct: 111 PVARGEWIGAFALTEPQAGSDASNLRTTARLEGDH-YVLDGVKQFITSGKNGQVAIVMAA 169 Query: 248 --QVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G+ G FLVP G+P G +RL++K G ++ T ++ F +N G Sbjct: 170 TNRAAGKKGISAFLVP----TGTP-GYIVERLEDKAGQSASDTAQIRFEGCRVPAANRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YAR R G + + ++ Sbjct: 225 AEGEGYKIALSGLEGGRIGI----AAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A+ I AA L + A+ D +EAA A++MA +MA V + A+ Sbjct: 281 FRLAEMAMQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMA-------SEMAERVCSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R +R+ I G+ + Sbjct: 334 QIHGGYGYVADFPVERIWRDVRVCQIYEGTSD 365 >gi|224825342|ref|ZP_03698447.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224602263|gb|EEG08441.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 386 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 107/407 (26%), Positives = 167/407 (41%), Gaps = 55/407 (13%) Query: 69 TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128 +A+E AR H P WD+ E P LRR+ G C + + P Sbjct: 15 SAREFAR---------HELAPYAAHWDEEEVFP--KDTLRRAGEMGF-CGL----YTPQQ 58 Query: 129 RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK--DWAPKIFSREYDPT 186 R + +L AG S A +T +H W F+R Sbjct: 59 YGGLGLTRLDAAIVFEELAAG--------CTSTAAYLT---IHNMVSWMIGSFARAEVAE 107 Query: 187 NKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFI 244 P + +G LTE G+D A + ++ ++ D +Y L+G K F+S S D + Sbjct: 108 QWGPALASGAKLGSYCLTEPGAGSDAANLRTRAERDGD-VYRLNGSKAFISGAGSTDVLV 166 Query: 245 MLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297 ++A+ G + F+VP L G+ Y + + K+G S T + F N Sbjct: 167 VMARTGGTGAKGISAFVVPADLP-----GISYGKKERKMGWNSQPTRTITFDNVAVPSAN 221 Query: 298 LLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 LLG+ G MK L ++ A SV + +L A Y + R G L + + Sbjct: 222 LLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQAALEAAARYVQERQQFGQALAEFQTV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD++ ++ AA + A D S S +A MA K + V+ EA Sbjct: 280 QFRLADMSTELVAARQMVRLAAWKLD---SGSPDATAYCAMA---KRFVTDAGFKVVNEA 333 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461 ++ GG GYI+E + RH R+S + IL G+ M V+ LL+ G Sbjct: 334 LQLFGGYGYIKEYPLERHLRDSRVHQILEGTNEIMRVIVARRLLQDG 380 >gi|254502174|ref|ZP_05114325.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222438245|gb|EEE44924.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 379 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 30/264 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCF 256 LTE G+D AA+ + + D Y L+G K F+S +SD + ++ + G + C Sbjct: 124 LTEPGSGSDAAALRTTAKDDGDH-YILNGSKAFISGGGVSDLYAVMVRTGDEGPGGISCL 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 LV E G+P GL + + K+G +S T ++ F SN G ++ + Sbjct: 183 LV----EKGTP-GLSFGANEVKMGWKSQPTAQVNFQDCRVPKSNLIGVEGQGFKIAMAAL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I S+ + L +AI Y R R G L ++ +AD+A ++ AA Sbjct: 238 DGGRLNI----GACSIGPAQECLDQAIAYMRERKQFGKPLTAFQALQFRLADMATELEAA 293 Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L ++ A D + + AA A+ +A T + V+ +A++ GG GY+ + Sbjct: 294 RLLLYKAATEVDAKTPDAPKFAAMAKRLATDTGF-------KVVNDALQLHGGYGYLRDY 346 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 I R R+ + IL G+ M L Sbjct: 347 PIERFLRDVRVHQILEGTNEVMRL 370 >gi|91793117|ref|YP_562768.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans OS217] gi|91715119|gb|ABE55045.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans OS217] Length = 583 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 28/292 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 + +TE + G+D+ I ++ DG Y ++G K F++ D ++LA++ G Sbjct: 164 MDMTEPQAGSDLRNIRTKAVPQEDGSYQITGSKIFITGGDQDLTENVIHLVLAKLPDSNG 223 Query: 255 C--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 FLVP++ + G NG+ +++K+G +++AT + F + GFL+G+ N Sbjct: 224 ISLFLVPKIAVNADGSLGEANGVTVGSIEHKMGLKASATCVMNFDSARGFLIGEANRGLA 283 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------LIDQPVMKR 357 + M L I + + + A YA R + G +I ++R Sbjct: 284 CMFTMMNYERLAIGIQGLGSAQAAYQMARDYANER-IQGTAADATEKRNDPIIVHGDVRR 342 Query: 358 AIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKYWCCKMAPAVI 412 + + A AL+ D AK + + A Y ++ P+ K + Sbjct: 343 MLLTVNAMTQAGRALAVMTGKQLDLAKYATGDIQQKAAKYVGLLTPVAKAFLTDRGLDAT 402 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + + GG GYI E I + R++ I G+ LD + G +L Sbjct: 403 IMSQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQALDFIGRKVTGDDL 454 >gi|307320510|ref|ZP_07599925.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306893786|gb|EFN24557.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] Length = 593 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 101/448 (22%), Positives = 185/448 (41%), Gaps = 76/448 (16%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDK------VEFHPAWHALLRRSIHDG 114 LGE ++ E R A+ L G G+R V+ W L R I G Sbjct: 31 LGEDLVDAILGEAGRFASEEVAPL---GDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGG 87 Query: 115 LHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHK 172 + +F + H + A + + ++P++T ++ AL T + Sbjct: 88 WNGLTAPEAFGG--QNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTDALKA 145 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S E+ T + LTE G+D+ + ++ ++ DG Y + G K Sbjct: 146 TFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERRDDGTYRILGQK 192 Query: 233 WFLS---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRL 275 F++ +D + L A +G + FLVP+ L EDGS N + L Sbjct: 193 IFITWGEHDFTDNIVHLVLARLPDAPAGTKG-ISLFLVPKFLVNEDGSLGERNDVFCHSL 251 Query: 276 KNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 ++K+G + T + + + G+L+G+ N + M +++A ++V Sbjct: 252 EHKLGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLACMFTM-----MNNARLAVGM 306 Query: 328 MRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALS 373 V++AEA I YA+ R SG G+ +I+ P + R + + + A+ Sbjct: 307 QGVAIAEAATQKAIAYAKERTQGRAPGWSGDGMSPIIEHPDIARTLLTMKALTQGSRAIV 366 Query: 374 FRLANSFDEAKSRSEEAAY-----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A++ D A + E A + ++ PI K + V + ++ GG G+IEE Sbjct: 367 YACAHAVDMAHAAQGEDARQWQERSSLLTPIAKSFATDAGVDVASMGIQVHGGMGFIEET 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456 AR+ R++ I G+ +D++ Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVT 454 >gi|312141407|ref|YP_004008743.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325673172|ref|ZP_08152865.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311890746|emb|CBH50065.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325556007|gb|EGD25676.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 611 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/323 (22%), Positives = 135/323 (41%), Gaps = 66/323 (20%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA + R + T + LTE G+D+ A ++ + DG + + G Sbjct: 146 QKQWAATLVERGWGAT-------------MVLTEPDAGSDVGAGRTKAVQQDDGTWHIEG 192 Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRLLED------GSPNGLCY 272 K F++S SD ++LA+ EG + F VP+ D G NG+ Sbjct: 193 VKRFITSATSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKFHFDFEKNELGERNGVFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +++K+G +++AT EL F G+L+G+++ + D+ + ++S + Sbjct: 253 TNVEHKMGLKASATCELTFGGHGTPAVGWLVGEVHNGIAQMFDVIEHARMMVGTKAISTL 312 Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375 A+ YA++R V G L P ++R++A + A A R Sbjct: 313 STGYLNALDYAKQR-VQGSDLTQMTDKTAPRVTITHHPDVRRSLA-----LQKAYAEGMR 366 Query: 376 LANSFDEAKSRSEEAAYAR------------IMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A E A ++ PI K + A + E+++ +GGSG Sbjct: 367 AVYLYTAAHQEPEMAQLVSGADEQLAHRVNDLLLPIVKGVGSERAYQYLTESLQTLGGSG 426 Query: 424 YIEERSIARHYRESPANSILLGS 446 ++++ I ++ R+S +S+ G+ Sbjct: 427 FLQDYPIEQYIRDSKIDSLYEGT 449 >gi|15806336|ref|NP_295042.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6459067|gb|AAF10888.1|AE001978_8 acyl-CoA dehydrogenase [Deinococcus radiodurans R1] Length = 398 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 20/266 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P+ + L+E G+D A + + D + ++G K W + +++ ++ A Sbjct: 131 GPLTEKPGLAAFALSEPNNGSDAAGMHTTAYLDGDE-WVINGTKMWISNGGIAEVTVVFA 189 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLG 300 + + G L+ G Y ++K+K+G R++ T EL F N G L Sbjct: 190 TTDKQGGHRATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPKENQLGGLGD 249 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ ++ +I + A SV R +L E++ YA++R G + ++ +A Sbjct: 250 GFKIAMKTLDKTRIPV----AAGSVGLARRALEESVKYAKQRERFGTPISQFQAIQFKLA 305 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ + + + A D+ + E+A I K +C +MA EA++ G Sbjct: 306 DMAIGVETGRLMYQKAAWLVDQGHTHGAESA-------IAKAYCSEMAFNAANEAIQIHG 358 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ E + + R+ N I G+ Sbjct: 359 GYGYVGEYPVEKLLRDVKLNMIYEGT 384 >gi|330938535|gb|EGH42120.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 592 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 37/305 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEAHAGTDLGIIRTRAEPQADGAYQITGSKIFITGGEHDLTENIIHLVLAKLPDAPPGP 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + +DGS N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 KGISLFLVPKFMVGDDGSIGERNTVSCGSIEHKMGIQASATCVMNFDAATGYLIGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSV-SGMRVSLAEAIHYA------------RRRHVSGGILIDQ 352 + M L I + SG+R S A+ YA + + + +I Sbjct: 286 LAAMFTMMNYERLGVGIQGLASGVR-SYQAAVEYALDRLQSRAPTGAQNKDKAADPIIVH 344 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + A S +A D AK ++ A R ++ P++K + Sbjct: 345 PDVRRMLLTMKAFNEGGRAFSSYVALQLDIAKFSEDDTARKRADDLAALLTPVSKAFLSD 404 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-LF 465 + + GG GYI E + R+ I G+ LD++ G+N Sbjct: 405 IGLETTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSNGAL 464 Query: 466 EQLFS 470 QLFS Sbjct: 465 YQLFS 469 >gi|299770620|ref|YP_003732646.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298700708|gb|ADI91273.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 384 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|242215320|ref|XP_002473476.1| predicted protein [Postia placenta Mad-698-R] gi|220727377|gb|EED81297.1| predicted protein [Postia placenta Mad-698-R] Length = 424 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 27/278 (9%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 ++H+ W +Y P A + S+A ++E G+D+ ++ + +K+ DG Y L Sbjct: 135 QIHR-WGTDAQKEKYLPDLIAGKKVGSLA----MSEPGSGSDVISMKLRAEKV-DGGYKL 188 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 +G+K W + P + ++ A+ G + ++E G +Q+L +K+G R + T Sbjct: 189 NGNKFWITNGPTASTLVVYAKTSPDKGSRGITAFIIESGFAGFSTHQKL-DKLGMRGSDT 247 Query: 287 VELEFSNTFGFLLGDLNVSTGPVED-MKILIY-LDSAIMSVSG-----MRVSLAEAIHYA 339 EL F + F + + +V GPV+ K+L+ LD + +SG M+ + A+ Y Sbjct: 248 CELVFEDCF---VPEESV-LGPVDGGAKVLMSGLDLERLVLSGGPLGLMQAAFDYAVEYV 303 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + +M+ IAD+ + A+ + + +A + D K + A A + Sbjct: 304 HERKQFGQPVGTFQLMQAKIADMYTKLNASRSYVYAVAKACDAGKVSRRDCAGAIL---- 359 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + A V +AM+C+GG+GY E R R++ Sbjct: 360 ---YSSDRAVEVTIDAMQCLGGNGYTNEYPTGRFLRDA 394 >gi|222055284|ref|YP_002537646.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] gi|221564573|gb|ACM20545.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] Length = 380 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LG TE G+D+ + ++ ++ D Y ++G K F+++ ++D ++ A + G + Sbjct: 122 LGATEPNAGSDLLNMKTRAERKGDK-YVINGQKCFITNGSVADITVVYAYTDPSKGAKGI 180 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++E G+P GL Y R + K+G R + EL F N L+G+ TG M+ Sbjct: 181 SAFVVERGTP-GLIYGRDEVKMGMRGSINSELFFENMEIPAENLIGE--EGTGFANLMQT 237 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + A +V + +L A+++AR R G + ++ IAD+A + A+ L Sbjct: 238 LSVNRIFCAAQAVGIAQGALEIAMNHARERVQFGNTIAHLTPIQFMIADMATAVEASRLL 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + A DE + A + + K + A V +A++ +GGSGY++E ++ R Sbjct: 298 TRKAAQLVDEHDKK------AVVFGGMAKTFASDTAMQVTTDAVQVLGGSGYMKENNVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKLTQIYTGT 365 >gi|52842158|ref|YP_095957.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629269|gb|AAU28010.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 375 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 38/282 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P+I S E L LTE G+D+ + +Q D + L+G K Sbjct: 108 WLPRIASGE-------------TLAALALTEPNIGSDLEHVETQLLDAGDE-FILNGSKK 153 Query: 234 FLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +++ ++D F++LA +G+ LV E G+P GL + N +G RSN E+ F Sbjct: 154 YITLGQIADLFLVLANCQGQPTAVLV----EKGTP-GLIISPMSNFLGLRSNMLAEIFFD 208 Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHV 344 N LLG + V V I LD + + V L +A + Y + R Sbjct: 209 NCRIPKTNLLGSIGVGFTYV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQERKQ 264 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 L + ++++ I ++ + + AA L F E + + A A + I KY Sbjct: 265 FNRRLDEHQLIQKMITEMVVQVKAARELCFYAG----ELRQKKNPAYIAETL--IAKYAA 318 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KM V A++ G +G+ E + R+YR++ I+ G+ Sbjct: 319 SKMVVFVSNHALQLFGAAGFDETYPVERYYRDAKVMEIIEGT 360 >gi|194899891|ref|XP_001979491.1| Arc42 [Drosophila erecta] gi|190651194|gb|EDV48449.1| Arc42 [Drosophila erecta] Length = 405 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIAIDKGDH-FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ + G + ++K+G R ++T +L F + ++ N+ P K Sbjct: 204 SAFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D+ + ++EAA A++ A C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTD 368 Query: 428 RSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 369 MAAERHYRDARITEIYEGT 387 >gi|91790028|ref|YP_550980.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666] gi|91699253|gb|ABE46082.1| isovaleryl-CoA dehydrogenase [Polaromonas sp. JS666] Length = 393 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 129 LAMSEPGAGSDVISMKLKAED-NGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL FSN +LG LN +G M L Sbjct: 188 TAFLIEKGMKGFSVAQKLDKLGMRGSHTGELVFSNVEVPAQNILGGLN--SGAKVLMSGL 245 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ + M+ + + Y R G + + +++ +AD+ + A + Sbjct: 246 DY-ERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSF 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ +A + D +E A R WC + A + E ++ GG+GYI + + R Sbjct: 305 AYTVAKNLD--MRGAEHARQVRKDCASVILWCAEKATWMAGEGVQIFGGNGYINDYPLGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|332975850|gb|EGK12728.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 380 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 37/274 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ K GLTE G+D + + D + ++G K F+++ + L V Sbjct: 113 PLCKGESLGAFGLTEPNAGSDAGGTRTTAIREGDD-WVINGSKCFITNASFAKHLALTAV 171 Query: 250 EGRVGCFLVPRLLEDGSP---------NGLCYQRLKN--KIGNRSNATVELEFSNTFGFL 298 GR EDGSP + ++ + N K+G S+ T EL N Sbjct: 172 TGRK---------EDGSPEISAVIVPTDAKGFRVIDNYVKMGLHSSNTTELVMENV---R 219 Query: 299 LGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 + N+ E K LI LD + + M V +A+ A+ YA+ R G + Sbjct: 220 VPHENILGRIGEGFKQFLITLDGGRIGIGAMAVGIAQGAYEAALQYAKERQQFGRPISKF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 V++ +AD+A++I A + ++ A D+ + S+EAA A++ A ++A V Sbjct: 280 QVIQHKLADMAMNIELARNMVYKAAWLKDQGRKFSKEAAMAKLFA-------SEVAMGVC 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY+ E + R +R++ I G+ Sbjct: 333 DQAVQIHGGYGYMHEYRVERFFRDAKLTEIGEGT 366 >gi|281425458|ref|ZP_06256371.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302] gi|281400451|gb|EFB31282.1| acyl-CoA dehydrogenase family protein [Prevotella oris F0302] Length = 576 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 23/307 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 F E P + + LTE G+D+ + + +DG + L+G K F+++ Sbjct: 152 FGTEEQRKKYIPRISAGETMSMDLTEPDAGSDLQRVMLKATLDADGTWRLNGVKRFITNG 211 Query: 239 MSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 SD ++LA+ E G + + D G+ + ++NK+G + T EL + N Sbjct: 212 DSDIHLVLARSEEGTRDGRGLSMFIYDKRDGGVTVRHIENKLGIHGSPTCELVYKNAKCE 271 Query: 298 LLGDLNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 L GD + G ++ + L+ L A SV + + EA+ YA+ R G +I P Sbjct: 272 LCGDRKL--GLIKYVMSLMNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGKKIITFPA 329 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKS--------------RSEEAAYARI---MA 397 + ++ + + A ++ + A D K+ R E Y R+ Sbjct: 330 VYDMLSRMKAKLDAGRSMLYMTARYVDIYKALEDISRERKLTPEERKEMKQYNRLADAFT 389 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 PI K + A +A+ GGSG+I E R YR++ SI G+ V+ + Sbjct: 390 PIAKGTNSEYANQNAYDAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRY 449 Query: 458 LEKGTNL 464 + GT L Sbjct: 450 ITNGTYL 456 >gi|212640554|ref|YP_002317074.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212562034|gb|ACJ35089.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 379 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 28/272 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D++A+ ++ + D Y L+G K W + +D +++ A + + Sbjct: 124 GLSEPGAGSDVSAMKTRAVRDGDH-YVLNGSKVWITNGGEADIYVVFAVTDPEKKHRGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V E G+P G + + K+G RS+ T EL F + + N+ E KI Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGEEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A+ A+ YA+ R G + +Q + +AD+A I A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVEYAKGRVQFGKPIAEQQGIAFKLADMATAIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A +E+A A++ A T A V EA++ GG GY ++ Sbjct: 295 ARLLTYQAAWLESNGLPYGKESAMAKLFAGDT-------AMKVTVEAVQIFGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R R++ I G+ + + +L K Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRIVISRMLTK 379 >gi|169826437|ref|YP_001696595.1| long-chain specific acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] gi|168990925|gb|ACA38465.1| Long-chain specific acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] Length = 382 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 41/290 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 W PK S Y + +TE G+D+A I Q I DG Y ++G K Sbjct: 111 WLPKCISGHY-------------ITAIAMTEPGTGSDLANI--QTTAIRDGDHYIVNGQK 155 Query: 233 WFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F+++ + +++A + G L+ ++EDG+P G R K+G + T Sbjct: 156 TFITNGIHTNLVVVAVKTNPSAEKKHQGISLL--VIEDGTP-GFTKGRKLEKVGMHAQDT 212 Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341 EL F + LLG+ G V M+ L L AI + + + LA + Y + Sbjct: 213 AELFFEDCRVPAHNLLGE--EGKGFVYMMEKLQQERLAVAIAAQTAIEDMLALTLDYVKS 270 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APIT 400 R G + D + IA++A + L SF E A + + Sbjct: 271 RQAFGKSIGDFQNTQFKIAEMATKM--------ELGKSFLETLIEEHLAGKDVVTKVSMA 322 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 KYW + A + + M+ GG GY+EE IAR YR+ P SI G+ M Sbjct: 323 KYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372 >gi|307295365|ref|ZP_07575204.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306878868|gb|EFN10087.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 600 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 48/348 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE GTD+ I ++ +DG Y ++G K F+S+ D ++LA+ E Sbjct: 163 MNLTEPHCGTDLGLIKTRAVPQADGSYIITGTKIFISAGEHDLTENIIHLVLAKTPDAPE 222 Query: 251 GRVGC--FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP+ L DGSP N L L++K+G NAT + + G+L+G+ N Sbjct: 223 GSKGISLFVVPKFLLNVDGSPGERNALSCGSLEHKMGIHGNATCVMNYDGATGWLVGEEN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGILIDQ------- 352 + M L + + ++ A YA R ++G +D+ Sbjct: 283 KGLAAMFIMMNAARLGVGLQGLGQAEIAYQNAALYAHERRQGRALTGPKDLDEKADTLFV 342 Query: 353 -PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 P ++R A+ + + AL LA+ + R +++ P+ K + Sbjct: 343 HPDVRRMLMEAKALTEGLRALMLWGALQVDLAHHAATEEERQAADDLLQLLTPVIKGYGT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 V A + GG GYI E + + R++ I G+ +D++ Sbjct: 403 DKGFDVAVTAQQVFGGHGYIWENGVEQFVRDARIAQIYEGTNGIQAMDLVG--------- 453 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513 L + G + + + I+ D ++ K D+ LA L E + AS Sbjct: 454 ----RKLAMNGGRALQSFLKIVADEVADAKGDEKLAP-LAEALEKASG 496 >gi|229587692|ref|YP_002869811.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|312958214|ref|ZP_07772737.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6] gi|229359558|emb|CAY46399.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|311287645|gb|EFQ66203.1| glutaryl-CoA dehydrogenase [Pseudomonas fluorescens WH6] Length = 393 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A+ ++ +K+ G Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKVEGG-YSLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ + + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWGKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 + D+ GP L+SA +S + AE A Y RH G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRHQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361 >gi|50084774|ref|YP_046284.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter sp. ADP1] gi|49530750|emb|CAG68462.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter sp. ADP1] Length = 375 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 38/276 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE + GTD + + ++ K D Y ++G K F++S +D I+ A Sbjct: 111 PLAQGQMLGAFALTEPQAGTDASNLKTKAIKDGDD-YIITGSKQFITSAQHADVVIVFAV 169 Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G+ G FLVP G RL+ K+G ++ T +++ + +LLG Sbjct: 170 TNPDAGKKGISAFLVPT-----DTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLG 224 Query: 301 DLNVSTGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 + E I LD+ A SV + +L AI YA+ R G +I+ Sbjct: 225 E--------EGQGYKIALDNLAGGRIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEH 276 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + +AD+A +A A + + A+ + ++ EA+ A++ A +MA V Sbjct: 277 QAVGFRLADMATQVAVARQMVWHAASLRESNQASLVEASMAKLFA-------SEMAEKVC 329 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A++ +GG GY+++ + + YR+ I G+ + Sbjct: 330 SGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSD 365 >gi|220916367|ref|YP_002491671.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954221|gb|ACL64605.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 385 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 13/266 (4%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247 AP + L ++E G+D+AAI + ++ DG ++G K ++++ F+ LA Sbjct: 119 APAVRGERVAALAISEPDAGSDVAAIRTTARR--DGADLVVNGSKMWITNGARADFLTLA 176 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 G G + LL G R K+G S+ T L F + LLG+ + Sbjct: 177 VRTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEDCRVPAANLLGEQDQ 236 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 V L +A+ +V+GM++ L +A+ Y R G + + +AD Sbjct: 237 GFYHVMANFQGERLVAAVQAVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLT 296 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L++R A+ + E + A++ A C++A V + M+ GG GY Sbjct: 297 AVEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGY 349 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E IAR +R+ A +I G+ M Sbjct: 350 VLESDIARAWRDVRAMTIAGGTSEIM 375 >gi|325283339|ref|YP_004255880.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP] gi|324315148|gb|ADY26263.1| Acyl-CoA dehydrogenase [Deinococcus proteolyticus MRP] Length = 380 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 22/267 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246 +P+ + L+E G+D A + + + DG + ++G K W + ++ ++ Sbjct: 112 SPLVEKPALAAFALSEPNNGSDAAGMHTTA--VLDGDEWVINGTKMWISNGGEAEVTVVF 169 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLL 299 A E G L+ G Y ++K+K+G R++ T EL F N G L Sbjct: 170 ATTERGAGHKATVALVVPKDAPGFSYNKIKHKMGQRASLTSELVFENVRVPRENQLGGLG 229 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 ++ ++ +I + A SV R +L E++ Y++ R G + ++ + Sbjct: 230 DGFKIAMKTLDKTRIPV----AAGSVGVARRALDESVKYSKEREAFGKPISSFQALQFKM 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A+ I + + A D+ E+A I K +C MA EA++ Sbjct: 286 ADMAMGIETGRLMYLKAAWLVDQGLPHGYESA-------IAKAYCSDMAFDAANEAIQIH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY+ E + + R+ N I G+ Sbjct: 339 GGYGYVGEYPVEKLLRDVKLNQIYEGT 365 >gi|213971499|ref|ZP_03399611.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] gi|301385793|ref|ZP_07234211.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13] gi|302062906|ref|ZP_07254447.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40] gi|302133683|ref|ZP_07259673.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923781|gb|EEB57364.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato T1] Length = 600 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG A+ YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G N +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGNALKQLL 469 >gi|170721232|ref|YP_001748920.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169759235|gb|ACA72551.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 582 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 42/308 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVE----GR 252 LTE + G+D+A + + + + DG Y ++G+K F+S D ++LA++ G Sbjct: 164 LTEPQAGSDLALLRCRAEPLGDGSYAVTGNKLFISGGDHDLTRDILHLVLARLPDAPAGS 223 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G LVP LE G NG+ L++K+G R +AT L F G+L+G + Sbjct: 224 RGLSLLLVPNGLEGGVGNGVQCDGLEHKLGIRGSATCALRFEGGKGWLVGQAHGGLA--- 280 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-----HYA-RRRHV--------SGGILID----Q 352 + + ++SA + V + AEA YA RR + +G D Sbjct: 281 --AMFVMMNSARLHVGLQGLGHAEAAWQLARDYALERRQMRAPGHSPSAGDAAADPIHLH 338 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYWCCK 406 P M+ + ++ + L + A+ D A + R++ + A ++ PI K Sbjct: 339 PAMRLTLLELRVRTEGMRTLGYWTAHWLDVAGASTDPALRAKASTLAALLTPIIKAAFTD 398 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNL 464 ++ ++A++ GG GY E I + R+S I G+ D+L +L G Sbjct: 399 YGFSLSSKALQVFGGYGYTCEFPIEQVLRDSRIAMIYEGTNEIQANDLLLRKVLGDGGEG 458 Query: 465 FEQLFSTL 472 F L L Sbjct: 459 FALLLGEL 466 >gi|257452534|ref|ZP_05617833.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium sp. 3_1_5R] gi|317059075|ref|ZP_07923560.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R] gi|313684751|gb|EFS21586.1| acyl-COA dehydrogenase [Fusobacterium sp. 3_1_5R] Length = 637 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301 +G + + + G + +K+G RS++T +L F+N G Sbjct: 172 TTPDIGTKGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 N++ ++ +I I A ++ + + EA++YA+ R G + Q + +AD Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L + A E K E MA K + +A ++ +A++ GG Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365 >gi|229178697|ref|ZP_04306061.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] gi|228604855|gb|EEK62312.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] Length = 569 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 27/292 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTDKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478 + R YR++ + I G+ L V +L K EQL T +E D+ + Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|310827112|ref|YP_003959469.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612] gi|308738846|gb|ADO36506.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612] Length = 641 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + D Y L+G+K F++ +P +D +++ A Sbjct: 114 PLCKGEKIGAFGLTEPNAGSDAGGTETTAIDKGDH-YLLNGNKIFITNAPKADTYVIFAV 172 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F++ + N+ Sbjct: 173 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAELVFNDV---KVPKENLLGEE 229 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A EA+ YA+ R G + Q + IAD+ Sbjct: 230 GQGFKIAMATLDGGRIGIASQALGIAQGAFEEAVAYAKERVQFGKPIGFQQAISFKIADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L ++ A E K E MA K + +A V +A++ GG+ Sbjct: 290 ATKLHTARLLIYQAA----ELKEYHEPYGMESAMA---KQYASDIALEVTNDALQIFGGT 342 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 343 GYLKGMEVERMYRDAKITTIYEGT 366 >gi|212533453|ref|XP_002146883.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|212533455|ref|XP_002146884.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210072247|gb|EEA26336.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210072248|gb|EEA26337.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 438 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 27/270 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259 L+E G+D A+ ++ +K +DG Y ++G K W +S + FI+ A ++ G + Sbjct: 179 LSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGFFIVFANIDPSKGYKGITA 237 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 ++E G+P G + + K+G R+++T VE+ +N G ++ G + + Sbjct: 238 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKANLLGEEGKGYKIAIGILNEG 296 Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +I I ++G+ + E A YA R G ++ D M+ IA +IAAA Sbjct: 297 RIGI-----AAQMTGLALGAWENAAGYAWNDRKQFGQLIGDFQGMQHQIAQAYTEIAAAR 351 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL + A R +EA +M A + K + ++A V A+E +GG G++ E Sbjct: 352 ALVYNAA--------RKKEAGQDFVMDAAMAKLYASQVAGRVAGSAVEWMGGMGFVREGI 403 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLE 459 + +R+S +I G+ N + + L+ Sbjct: 404 AEKMFRDSKIGAIYEGTSNIQLTTIAKQLQ 433 >gi|116255587|ref|YP_771420.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115260235|emb|CAK03339.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 395 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W ++P++D F++ A Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWA 185 Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + E G + F +LE G GL + K+G R++ T E+ F LL D+ Sbjct: 186 KTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVFVPEENLLPDVT 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 GP L+SA ++ + AE A Y R G L ++++ Sbjct: 241 GLKGP------FTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKK 294 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A +I+ RL +E E + I K C A + A + Sbjct: 295 LADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDM 347 Query: 419 IGGSGYIEERSIARH 433 +GG+G +E IARH Sbjct: 348 LGGNGISDEFGIARH 362 >gi|294862190|dbj|BAJ05798.1| short-chain acyl-CoA dehydrogenase precursor [Homo sapiens] Length = 412 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|163940314|ref|YP_001645198.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229011799|ref|ZP_04168980.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048] gi|229133623|ref|ZP_04262450.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|163862511|gb|ABY43570.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis KBAB4] gi|228650023|gb|EEL06031.1| Butyryl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|228749430|gb|EEL99274.1| Butyryl-CoA dehydrogenase [Bacillus mycoides DSM 2048] Length = 381 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + I DG Y +SG K W ++ ++ I+ A Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + R+ R+ A + +G G + + Sbjct: 333 NHAVQIHGGYGYMREYEVERYIRD--AKLLEIGEGTSEI 369 >gi|167748723|ref|ZP_02420850.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662] gi|167651693|gb|EDR95822.1| hypothetical protein ANACAC_03497 [Anaerostipes caccae DSM 14662] Length = 380 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 44/267 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253 GLTE G+D + ++ D Y L+G K F + P++D A L + E + + Sbjct: 124 FGLTEPNAGSDAGGCVTVAERDGD-EYILNGMKCFNTNGPLADYTAVYALTEPEKKAKGL 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF+V + G+P G ++++K+G RS E+ +L ++ V P E+M Sbjct: 183 SCFVVKK----GTP-GFSVGKVEDKMGIRSAQVSEM--------ILENVRV---PAENMI 226 Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + + LD + V+ + +AE A Y + R G L + + Sbjct: 227 VPSGDGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++I AA + ++ A E +S S AA A KY C + A V EA++ + Sbjct: 287 AELEMEIDAAKLMLYKAATDKQEGRSYSIPAAKA-------KYLCTEAAMHVTTEAVQML 339 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY++ + R R++ I G+ Sbjct: 340 GGNGYMKGYHVERMMRDAKITQIYEGT 366 >gi|27377768|ref|NP_769297.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27350913|dbj|BAC47922.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 592 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/330 (21%), Positives = 148/330 (44%), Gaps = 49/330 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQV 249 LTE + G+D+ A+ ++ +K +DG Y + G K F++ M+D + A Sbjct: 163 LTEPQAGSDVGALRTRAEKQADGTYRIKGTKIFITYGEHDMTDNIVHFVLARLPDAPAGT 222 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 +G + FLVP+ + + G+ N + +++K+G ++ T + + GFL+G+ Sbjct: 223 KG-ISLFLVPKFMVNADGSLGARNDIFASGVEHKLGMHASPTCTMTMGDHGGAIGFLIGE 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQ 352 N + M L + V + +A+ YA+ R + + Sbjct: 282 ENQGMRCMFTMMNQARLGVGLEGVGVADRAYQQALSYAQERKQGRAVGKKGDGSDAIFVH 341 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCK 406 P +KR + + AAA + + A + D + K R++ AA A ++ P+ K + Sbjct: 342 PDVKRMLMRMRAQTAAARTICYATAVAIDVSTRARDPKVRADAAARAALLTPMAKGYSTD 401 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---------- 456 + V ++ GG G+IEE A++YR++ +I G+ +D++ Sbjct: 402 IGNEVAYLGVQVHGGMGFIEETGAAQYYRDARITAIYEGTNGIQAIDLVTRKLAANGGAA 461 Query: 457 ---LLEKGTNLFEQLFSTLEQDLGSSGKKV 483 LL++ + + +Q+ ++ + G++G K+ Sbjct: 462 VWALLDELSAVVKQVEASNDPAFGTTGAKL 491 >gi|332975299|gb|EGK12198.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 601 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 55/341 (16%) Query: 154 PSVTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 P +TSA++ L + + + P++ + E+ T + LTE G+ + Sbjct: 128 PFLTSAAINVLTHFADDTIKQAFIPRMLTGEFTGT-------------MALTEPHAGSSL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP- 259 A I + K DG Y + G K ++S +SD + +LA+V G + F+VP Sbjct: 175 ADIRTTAIKQEDGTYRIRGSKIYISGGDHELSDNIVHLVLAKVPGGPAGVKGISLFVVPK 234 Query: 260 -RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 RL E G N + L +K+G R + L F + G+L+G+ L Sbjct: 235 YRLDEQGQVVERNDVHLAGLIHKLGYRGTTSTALSFGDKNECVGYLIGEEHFGLRYMFKM 294 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVS----GGILIDQPVMKRAIAD 361 + + +I + +A++ G + SLA A + R H+S +I+ +KR + Sbjct: 295 MNEARIAVGFGAAMIGYRGYQYSLAYAKDRLQGRVAPHLSPEDDAAPIIEHGDVKRML-- 352 Query: 362 IALDIAAATALSFRL--------ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 +A +S L N+ D+ + E A ++ P+ K W + P Sbjct: 353 LAQKAYGEGGISLCLYGSNLIDRINTCDDETQKQELAELLDLLTPVLKAWPSEYGPKAND 412 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ +GG+GY E + +R++ N I G+ LD+ Sbjct: 413 LGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDL 453 >gi|308173826|ref|YP_003920531.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus amyloliquefaciens DSM 7] gi|307606690|emb|CBI43061.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus amyloliquefaciens DSM 7] gi|328553248|gb|AEB23740.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus amyloliquefaciens TA208] gi|328911967|gb|AEB63563.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus amyloliquefaciens LL3] Length = 380 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 GLTE G+D ++ +K D Y ++G K ++++ +++ V G+ G + Sbjct: 123 FGLTEPNAGSDAGGTQTKAEKKGDD-YVINGEKCWITNANYARTVIVTAVTGKNSAGKPI 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + L+ G +K+G R + T EL + LLGD P + K Sbjct: 182 ISALIVPTDTPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGD------PEKGFKQ 235 Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +Y LD +S++ + V +A+ ++ YA+ R G + ++ +AD+A++I Sbjct: 236 FLYTLDGGRISIAALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDL 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + + A D+ ++EAA+A++ + +MA +A++ GGSGY++E Sbjct: 296 ARQMVLKAAWLKDQNLPFTKEAAFAKL-------YASEMAVRTCLQAIQIHGGSGYMKEY 348 Query: 429 SIARHYRESPANSILLGSGNAMV 451 + R R+ A + +G G + + Sbjct: 349 GVERMLRD--AKLMEIGEGTSEI 369 >gi|169333728|ref|ZP_02860921.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM 17244] gi|169259577|gb|EDS73543.1| hypothetical protein ANASTE_00112 [Anaerofustis stercorihominis DSM 17244] Length = 634 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D + + D Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGSDAGGTETTAELKGD-YYLLNGGKIFITNADKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS+AT EL F++ + N+ Sbjct: 172 TTPGIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSATAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ YA+ R G + V+ +AD+ Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENAVEYAKEREQFGTAIAHNQVIGFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L++ A E K E MA K + + V+ +A++ GGS Sbjct: 289 ATKLRCARFLNYSAA----ELKEHHEPYGMESAMA---KMYSSDICLEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMDVERAYRDAKICTIYEGT 365 >gi|194293008|ref|YP_002008915.1| acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] gi|193226912|emb|CAQ72863.1| Putative acyl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 385 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR 252 I LTE G+D A++ ++ + D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGPGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENVRVPAANIIGGVP-GVGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYAKERKQFGRPIGDFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A TK +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E R YR+ Sbjct: 349 IAEYKAERFYRD 360 >gi|83773190|dbj|BAE63317.1| unnamed protein product [Aspergillus oryzae] Length = 431 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 29/257 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 + K +A GLTE G+D ++ + ++ G Y LSG K W +SP+SD I+ A Sbjct: 158 LAKGKIAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGTKTWITNSPISDILIVWA 217 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 ++E G++ F+V R + P L +KNK R++ T ++ + + D+ Sbjct: 218 KLESTGKIRGFVVER--DQCPPGTLETPAIKNKTALRASITGMIQMDDCPVPKENMFPDV 275 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 TGP L+SA + ++ G +L + + AR R+ G L +++ Sbjct: 276 EGLTGP------FTCLNSARLGIAFGAMGALEDCLSRARTYALERKQFKGNPLAKYQLIQ 329 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD A D A T + ++A DE KS E M + K C A A Sbjct: 330 KKLADAATDAAYGTLAATQVARLKDEGKSTPE-------MISMIKRQNCDRALANSRILQ 382 Query: 417 ECIGGSGYIEERSIARH 433 E GG+ +E I RH Sbjct: 383 EVFGGNATSDEYHIGRH 399 >gi|257466398|ref|ZP_05630709.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium gonidiaformans ATCC 25563] gi|315917554|ref|ZP_07913794.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|313691429|gb|EFS28264.1| acyl-COA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 637 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYILNGEKIFITNAPYADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGD 301 +G + + + G + +K+G RS++T +L F+N G Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKG 231 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 N++ ++ +I I A ++ + + EA++YA+ R G + Q + +AD Sbjct: 232 FNIAMATLDGGRIGI----ASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L + A E K E MA K + +A ++ +A++ GG Sbjct: 288 MATKLRAARFLVYSAA----ELKEHHEPYGMESAMA---KQYASDVALEIVNDALQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY++ + R YR++ +I G+ Sbjct: 341 AGYLKGMPVERFYRDAKICTIYEGT 365 >gi|257464196|ref|ZP_05628576.1| acyl-CoA dehydrogenase family protein [Fusobacterium sp. D12] gi|317061715|ref|ZP_07926200.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12] gi|313687391|gb|EFS24226.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12] Length = 377 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A+ T+ + D Y L+G K F++ +P++D I+ A + G + Sbjct: 121 FGLTEPGAGSDAASGTTTARWEGDH-YVLNGRKCFITNAPIADFAIISAMTDRTKGVKGI 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D + G +NK+G R T ++ N L+V + KI++ Sbjct: 180 SVFIVDANTEGWSVGAHENKMGIRGTITSDIVLDNVKVPKENLLDVEG---KGFKIMMNT 236 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +A EAI Y + R G L + IA++A + AA L Sbjct: 237 LDYGRIGVAAQALGIAQGALDEAIKYVKERKQFGKPLSKFQNTQFKIAELATKVQAARLL 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + D AK + +E + + + KY+ ++A V A++ GG GYI++ I R Sbjct: 297 VY------DAAKIK-DEGGKPGLQSSMAKYYAAEIANEVAYWALQLHGGYGYIKDYPIER 349 Query: 433 HYRESPANSILLGS 446 YR++ SI G+ Sbjct: 350 MYRDARITSIYEGT 363 >gi|255010864|ref|ZP_05282990.1| putative acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12] gi|313148666|ref|ZP_07810859.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12] gi|313137433|gb|EFR54793.1| acyl-CoA dehydrogenase [Bacteroides fragilis 3_1_12] Length = 567 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 135/291 (46%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + D + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYSEKDQCWYLNGVKRFITNGDADIHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + ++ + + A+ Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDRKQFGKAIIEFPAVAEILSLMKAKLDASR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L + A D K+ R+E+ +A++ P+ K + A Sbjct: 347 SLLYETARFVDIYKALDDIAKERKLTPEERAEQKTFAKLADAFTPLGKGMGSEFANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++++ + R YR+S SI G+ V+ + + G L Sbjct: 407 DCIQIHGGSGFMKDYACERIYRDSRITSIYEGTTQLQVVAAIRYVTTGAYL 457 >gi|220921271|ref|YP_002496572.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219945877|gb|ACL56269.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 413 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + ++ +KI DG Y LSG K W ++P++D F++ A+ + ++ Sbjct: 155 FGLTEPDAGSDPGGMKTRAKKI-DGGYLLSGVKTWISNAPIADVFVVWAKSAAHDNQIRG 213 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F +LE G GL ++K K+ R++ T E+ LL +++ GP Sbjct: 214 F----ILEKGM-KGLSAPKIKGKLSLRASVTGEIVMDGVEVPESALLPNVSGLKGP---- 264 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y R G L +++R +AD+ +IA Sbjct: 265 --FGCLNRARYGISWGAMGAAEDCWHRARQYTLDRTQFGRPLAQTQLVQRKLADMQTEIA 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ FDE + E M I K C A A+ EA + GG+G + E Sbjct: 323 LGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALAIAREARDMHGGNGIMGE 375 Query: 428 RSIARH 433 + RH Sbjct: 376 YHVMRH 381 >gi|262278695|ref|ZP_06056480.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259046|gb|EEY77779.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 384 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGIE-GIGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|254471846|ref|ZP_05085247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] gi|211959048|gb|EEA94247.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] Length = 592 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 78/362 (21%), Positives = 152/362 (41%), Gaps = 53/362 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P++T+ ++ A+ +P + + K+ S E+ T + LTE G+ Sbjct: 123 LCPTLTTGAVEAIEKHGSPELKAKYLEKLTSGEWTGT-------------MNLTEPHAGS 169 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFL 257 D+ A+ ++ + + DG Y +SG K F++ M+D I L A G + F Sbjct: 170 DLNALRAKAEPVGDGSYKISGQKIFITYGDHDMTDNVIHLVLARLPDAPAGTRG-ISLFA 228 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 VP+ +DGS N + +++K+G + T + + + G+L+G+ N + Sbjct: 229 VPKYFVNDDGSLGEKNDVTVAGVEHKLGIHGSPTCTMSYGDNGGAIGWLIGEENRGLACM 288 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI---------LIDQPVMKRAIA 360 M L + + + EA+ Y+ R G+ + P +KR + Sbjct: 289 FTMMNNARLAVGVQGLGIAERAFQEALAYSLDRKQGRGVGSKTDGMDPIAVHPDIKRTLL 348 Query: 361 DIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + A A+ + A++ D +A+ + A A ++ PI K V + Sbjct: 349 SMKSQTQVARAICYACAHALDMAKLAPDAEQKKFWAERAGLLTPIAKALSTDFGVDVASL 408 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL 472 ++ GG G+IEE A+H R++ I G+ +D++ L G + L S + Sbjct: 409 GIQIHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQSIDLVMRKLPMSGGDQVRSLISEI 468 Query: 473 EQ 474 ++ Sbjct: 469 KE 470 >gi|326441280|ref|ZP_08216014.1| acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus ATCC 27064] Length = 385 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 41/272 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 + +TE G+D+A + + ++ DG Y L+G K F++ + +D I+ A+ E R Sbjct: 124 IAMTEPGTGSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDR 183 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F+V LE G R +K+G R++ T EL F+ D+ VS G + Sbjct: 184 RHGISLFVVDTGLE-----GYAVGRKLDKLGLRTSDTAELSFT--------DVRVSAGDL 230 Query: 310 --EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 E+ K YL A+ + + ++ Y R R V G + K Sbjct: 231 LGEEHKGFSYLGQNLPQERLAIAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFE 290 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A ++ AA A+ R ++ D + + EAA A++ +C ++A VI ++ Sbjct: 291 LASCKAEVDAAEAVVDRALDAHDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQL 343 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375 >gi|325123411|gb|ADY82934.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 593 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 165/404 (40%), Gaps = 53/404 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIADIALDI 366 I + + A YA + R +G ++P ++R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANN 357 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420 A+ A + + D K ++ AA + ++ PI K + A +A G Sbjct: 358 EASRAFAVYVGQQLDITKFSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFG 417 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSS 479 G GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 418 GHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAND 477 Query: 480 GKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 478 LDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521 >gi|229060210|ref|ZP_04197579.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603] gi|228719092|gb|EEL70704.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH603] Length = 381 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + I DG Y +SG K W ++ ++ I+ A Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + R+ R+ A + +G G + + Sbjct: 333 NHAVQIHGGYGYMREYEVERYIRD--AKLLEIGEGTSEI 369 >gi|297565526|ref|YP_003684498.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849975|gb|ADH62990.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM 9946] Length = 373 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 23/277 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 K S E P+ K LTE G++ A++ + +++ G + L G K W Sbjct: 99 KFGSLEQKKKYLVPLAKGEWIGAFCLTEPHAGSNPASMKTTAKRVPGG-WQLDGVKSWIT 157 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 S + ++++A+ E + FLV E +P GL + R + K+G + T E F F Sbjct: 158 SGGQAHLYVVMARGEAGICSFLV----EKDTP-GLSFGRPEEKMGLHAAHTTETRFDGVF 212 Query: 296 GFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGIL 349 + + N+ E + + L LDS + ++ V +A A YA R G + Sbjct: 213 ---VPEENLLGVEGEGLAQALAGLDSGRLGIAAQAVGMARAAFELAKQYADERTQFGQRI 269 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + + +A++ IAAA AL+ A D + + EA+ A++ A T A Sbjct: 270 REFQGVSFKLAEMHTKIAAARALTLEAAAKKDRGERFTLEASSAKLFASET-------AV 322 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V +A++ +GG GY + + R+YR++ I G+ Sbjct: 323 DVTRQAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGT 359 >gi|108797080|ref|YP_637277.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119866165|ref|YP_936117.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126432702|ref|YP_001068393.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108767499|gb|ABG06221.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119692254|gb|ABL89327.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126232502|gb|ABN95902.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 380 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ SDG Y ++G K W +D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALRCAAVP-SDGKYVITGEKSWITHGGRADFYTLFARTGEGSRGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +P G GL + + + K+G + T + + D + Sbjct: 186 IP-----GGQPGLSFGKPEEKMGLHAVPTTTAHYDEAR--VDADRRIGAEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA EA YA R G +ID + +AD+A + +A A Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARAT 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D S +A+ A+++A A V +A++ +GG GY + + R Sbjct: 299 YLDAARRRDLGLPYSTQASVAKLIA-------TDAAMKVTTDAVQVLGGVGYTRDFRVER 351 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 352 YMREAKITQIFEGT 365 >gi|4557233|ref|NP_000008.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Homo sapiens] gi|113019|sp|P16219|ACADS_HUMAN RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor gi|337928|gb|AAA60307.1| short chain acyl-CoA dehydrogenase precursor (EC 1.3.99.2) [Homo sapiens] gi|2821942|emb|CAB02492.1| acyl-CoA dehydrogenase [Homo sapiens] gi|4099119|gb|AAD00552.1| short chain acyl CoA dehydrogenase [Homo sapiens] gi|119618624|gb|EAW98218.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Homo sapiens] gi|311349298|gb|ADP91814.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349300|gb|ADP91815.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349302|gb|ADP91816.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349304|gb|ADP91817.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349306|gb|ADP91818.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349308|gb|ADP91819.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349310|gb|ADP91820.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349312|gb|ADP91821.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349314|gb|ADP91822.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349316|gb|ADP91823.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349318|gb|ADP91824.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349320|gb|ADP91825.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349324|gb|ADP91827.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349326|gb|ADP91828.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349328|gb|ADP91829.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349330|gb|ADP91830.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349332|gb|ADP91831.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349334|gb|ADP91832.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349336|gb|ADP91833.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349338|gb|ADP91834.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349340|gb|ADP91835.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349342|gb|ADP91836.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349346|gb|ADP91838.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349348|gb|ADP91839.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349350|gb|ADP91840.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349352|gb|ADP91841.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349354|gb|ADP91842.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349356|gb|ADP91843.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349358|gb|ADP91844.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349360|gb|ADP91845.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349362|gb|ADP91846.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349364|gb|ADP91847.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349366|gb|ADP91848.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349368|gb|ADP91849.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349372|gb|ADP91851.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|311349374|gb|ADP91852.1| mitochondrial short-chain specific acyl-CoA dehydrogenase [Homo sapiens] gi|227487|prf||1704375A short chain acyl-CoA dehydrogenase Length = 412 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|326328649|ref|ZP_08194989.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325953610|gb|EGD45610.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 382 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 40/306 (13%) Query: 156 VTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 +T+ +V L T + + W P + S E + + +G+TE GG+D+AA+ Sbjct: 96 ITAPYLVRLGTEEQKQR-WLPGVASGE-------------ILLAIGMTEPSGGSDLAALK 141 Query: 216 SQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274 + + D + ++G K F+++ S D I + + G + + + G R Sbjct: 142 TTAVRDGDE-WVINGSKTFITNGYSCDLVITAVRTDPEKGAKGITLFAIEATKEGFSRGR 200 Query: 275 LKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMR 329 +K+G + T EL F N T ++G+LN G + M+ L + A+ +++ + Sbjct: 201 KLDKVGMEESDTAELFFENVRVTDAEIIGELN--RGFIHMMEELPQERVSCAVANIAQAK 258 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 L E + YA+ R G + K +A++ I A A + Sbjct: 259 QILLETVQYAKDRKAFGQSIGAFQHNKFLLAELVTQIEVAEAYVDKCV------------ 306 Query: 390 AAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 AA+AR + A K+W + V+ ++ GG G++ E +AR +R++ I Sbjct: 307 AAHARGELTPVEASKAKWWSSQAQSEVLDHCVQIHGGYGFMNEYRVARAWRDARVTKIWA 366 Query: 445 GSGNAM 450 GS M Sbjct: 367 GSNEIM 372 >gi|229170663|ref|ZP_04298307.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621] gi|228612823|gb|EEK70004.1| Butyryl-CoA dehydrogenase [Bacillus cereus AH621] Length = 381 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 39/279 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 PM GLTE G+D +Q + I DG Y +SG K W ++ ++ I+ A Sbjct: 113 PMASGKTLGAFGLTEPNAGSDAGG--TQTKAILDGDEYVISGEKCWITNAEYANTIIVTA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + R+ F+VP E GL +K+G R++ T E+ + Sbjct: 171 INGFEDNGKKRISAFIVPTTSE-----GLTISSPYDKMGVRASNTCEIVLDGVRVPKENI 225 Query: 299 LGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 LGD+N + K +Y LD +S++ + V +A+ A+ YA+ R G + + Sbjct: 226 LGDVN------KGFKQFLYTLDGGRISIAALAVGIAQSAFERALQYAKERQQFGKPISNF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ A L + A D K +EAA A++ A + A + Sbjct: 280 QAIQFKLADMATEVELARNLVHKAAWLKDNDKPFGKEAAMAKLFA-------SEAASRIA 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ GG GY+ E + R+ R+ A + +G G + + Sbjct: 333 NHAVQIHGGYGYMREYEVERYLRD--AKLLEIGEGTSEI 369 >gi|148554517|ref|YP_001262099.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148499707|gb|ABQ67961.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 383 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 15/268 (5%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLA 247 P T IG + +TE G+D+ AI +Q + G Y ++G K F+++ + D +++A Sbjct: 116 PALATGEIIGAIAMTEPGAGSDLKAIRTQARPCEGG-YRITGQKTFITNGQTADLILVVA 174 Query: 248 QVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL 302 + + G + L +E + G R +K+G + T EL F + F L G+ Sbjct: 175 KTDMAAGAKGMSLLAVEAANAEGFVRGRNLDKLGLHAQDTSELFFEDVFVPEENLLGGEP 234 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + + + I L + + + M ++ YAR R G L+D + +A+ Sbjct: 235 GRAFAQLMEQLIWERLTVTLNAATDMERAIEMTAAYARERSAFGQRLMDFQNTQFKLAEC 294 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A AL FD+ R E A KYW + V E ++ GG Sbjct: 295 KASAVVARAL-------FDDMLQRFLEGTLDAATAASAKYWASEALGKVADECLQLFGGY 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR + ++ A+ I G+ + M Sbjct: 348 GYMTEYPIARLWADARASRIYAGASDIM 375 >gi|218780389|ref|YP_002431707.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761773|gb|ACL04239.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 382 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 15/281 (5%) Query: 185 PTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 P KA P+ K LG+TE GG+D+A + + + D Y ++G K F++S Sbjct: 110 PEQKAKFITPVLKGDRIAALGVTEPSGGSDVANLKTTAVRDGDH-YVVNGSKTFITSGTR 168 Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGF 297 + A G G + L+ + G K+G ++ T E+ F N Sbjct: 169 AHQLTTAVRTGGDGHKGISFLVIESDTPGYSTSPPMKKMGWWASDTAEIYFDNCRVPVEN 228 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 L+G+ N + + L A+M+ +++ E + Y ++R G L V + Sbjct: 229 LIGEENKGFYYIMENFQNERLSLAVMANVTAQMAFEECVKYVKQREAFGKTLNAYQVTRH 288 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + D+A I A+T ++R+A + + +E + A K + C++A V +A++ Sbjct: 289 KLVDMATLIEASTEFTYRVAAKMNGGIPQIKEVSMA-------KNFACQIADKVTFDAVQ 341 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GG GY+ + R YR++ SI G+ M + N + Sbjct: 342 IFGGYGYMRGHLVERLYRDNRILSIGGGTTEIMKEIISNFI 382 >gi|148359504|ref|YP_001250711.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby] gi|148281277|gb|ABQ55365.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby] Length = 375 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 116/281 (41%), Gaps = 36/281 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P+I S E L LTE G+D+ + +Q D K+ Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++D F++LA +G++ LV + +GL + N +G RSN E+ F N Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 LLG++ + V I LD + + V L +A + Y ++R Sbjct: 210 CRIPKTNLLGNIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 L + ++++ I ++ + AA L F E + + A A + I KY Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KMA V A++ G +G+ E + R+YR++ I+ G+ Sbjct: 320 KMAVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360 >gi|157961902|ref|YP_001501936.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157846902|gb|ABV87401.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC 700345] Length = 586 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 82/345 (23%), Positives = 146/345 (42%), Gaps = 52/345 (15%) Query: 155 SVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S+T+ + +A+ + + + + P ++S E+ A + +TE + G+D+ Sbjct: 130 SLTAGAALAIHAHGSEEIKEQYLPMMYSGEW-------------AGAMDMTEPQAGSDLR 176 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC--FLVPRLLED- 264 I ++ DG Y ++G K F++ D ++LA++ G FLVP++ + Sbjct: 177 NIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNA 236 Query: 265 ----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 G NG+ +++K+G + +AT + F + G+L+G N G V ++ Y Sbjct: 237 DNSLGDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPN--RGLVCMFTMMNYERL 294 Query: 321 AIMSVSGMRVSLAE---AIHYARRRH---VSGG---------ILIDQPVMKRAIADIALD 365 AI + G+ S A A YA+ R +GG IL+ V +R + I Sbjct: 295 AI-GIQGLGTSQAAYQMAADYAKERVQGVAAGGSPTGANCDPILVHGDV-RRMLLTIRTL 352 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A ALS D AK + A+ ++ P++K + A + Sbjct: 353 TEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDRGLDAAIMAQQVF 412 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 GG GYI E I + R++ I G+ +D L G N+ Sbjct: 413 GGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNV 457 >gi|114647349|ref|XP_001162935.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform 2 [Pan troglodytes] Length = 412 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|120556345|ref|YP_960696.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326194|gb|ABM20509.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 379 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 29/310 (9%) Query: 157 TSASMVALMTT-----PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 TS VA + + P V K WA K + P P+ + L +TE GG+D+ Sbjct: 81 TSGGFVASIGSLDIGLPPVAK-WAKKDIREQIVP----PVLRGDKIAALAVTEPGGGSDV 135 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPN 268 A + ++ K D Y ++G K F++S + +D + + + EG G L+ L++ G+P Sbjct: 136 ANLKTRAVKDGDH-YIVNGSKTFITSGIRADHYTVAVRTGGEGHGGISLL--LIDKGTPG 192 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 +L+ K+G ++ T EL F + L+G N + + L +IM+ Sbjct: 193 FTTGNKLR-KMGWWASDTAELFFEDCRVPADRLIGAENAGFIAIMSNFLAERLSLSIMAY 251 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +++ A+ Y R+R G + V + + D+A I A ++R A K+ Sbjct: 252 MTAQIAYEAALDYTRQRQAFGRPVAGFQVTRHKLVDMATQIDIAREYTYRCAALMQAGKN 311 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 ++ A A K + + V EA++ GG GY+ E + R YR++ SI G Sbjct: 312 PIKQVAMA-------KNFSVDVCEKVTREAVQLFGGIGYMRESVVERLYRDAKILSI--G 362 Query: 446 SGNAMVLDVL 455 G ++ L Sbjct: 363 GGTTEIMKEL 372 >gi|320164485|gb|EFW41384.1| short-chain specific acyl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 416 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ + + D + L+G K W ++ + A I+ A + + Sbjct: 157 FGLSEPGNGSDAGAASTTAKLVGDE-WVLNGTKAWITNAYEASAAIVFATTDRSLKHRGI 215 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+VP + G R ++K+G R ++T +L + LLG E Sbjct: 216 SAFIVPT-----NAPGFSLGRKEDKLGIRGSSTAQLIMEDCRIPKNMLLGKEG------E 264 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI ++ LD + ++G + +A+A + YAR R G + D ++ IAD+ L Sbjct: 265 GFKIAMMTLDGGRIGIAGQGLGIAQASLDCAVKYARDRKAFGKPICDLQAIQFKIADMNL 324 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++ A D +E AA A++ A T + +A++ +GG GY Sbjct: 325 KLHSARLLTWAAAQKADSHLDFTEFAAMAKLAASETATFNAH-------QAIQILGGMGY 377 Query: 425 IEERSIARHYRESPANSILLGS 446 + + RHYR++ I G+ Sbjct: 378 VSDMPAERHYRDARITEIYEGT 399 >gi|311696106|gb|ADP98979.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 388 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 17/285 (5%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 WA K + P P+ + L +TE GG+D+A + ++ + D Y ++G K Sbjct: 111 WAKKDIREQIVP----PVLRGEKIAALAVTEPGGGSDVANLKTRAVRDGDH-YIVNGSKT 165 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 F++S M +A G G + LL D G + K+G ++ T EL F + Sbjct: 166 FITSGMRADHYTVAVRTGGEGHGGISLLLIDRDMPGFSTGKKLRKMGWWASDTAELFFED 225 Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 L+G N + + L AIM+ +++ A+ Y ++R G + Sbjct: 226 CRVPADRLIGAENAGFIAIMSNFLFERLSLAIMAYMTAQLAYEAALEYTQQRTAFGRNIT 285 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 V + + D+A I A ++R A K+ +E A A K + + Sbjct: 286 GFQVTRHKLVDMATQIDVAREYTYRCAALMQAGKNPIKEVAMA-------KNFSVDVCEK 338 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 V EA++ GG GY+ E + R YR++ SI G G ++ L Sbjct: 339 VTREAVQLFGGMGYMRETVVERLYRDAKILSI--GGGTTEIMKEL 381 >gi|264680338|ref|YP_003280248.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262210854|gb|ACY34952.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 598 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 64/376 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP K + K+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKTYLGKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLV 258 D+ + ++ + ++DG Y ++G+K F+S+ D ++LA++ + VG F+V Sbjct: 175 DLGLLRTKAEPLADGSYRVTGNKIFISAGEHDFTSNIVHLVLARLPDAPVGSKGISLFVV 234 Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P ++ DGS N + L++K+G NAT ++ G L+G+ N Sbjct: 235 PKFKVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQ---PVMKRAIAD 361 + + +++A + V + L E A+ YA+ R +SG D+ P++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349 Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 L A A A R ++F + K R + ++ PI K + Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465 + + GG G+I+E + + R++ N I G+ LD+L L +G L F Sbjct: 410 ATMLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469 Query: 466 EQLFSTLEQDLGSSGK 481 +L + L ++ G + K Sbjct: 470 GKLIAQLVEEEGVNEK 485 >gi|121608699|ref|YP_996506.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553339|gb|ABM57488.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 398 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + AIG GLTE G+D A+ ++ K++ G Y L G K W + Sbjct: 114 FGTEAQRQKYLPPLASGAAIGCFGLTEPDHGSDPGAMATRAHKVAGG-YRLEGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G P GL + K+G R++ T E+ Sbjct: 173 SPVADLFVVWAKEVSEAGAVGPIRGFVLEKGMP-GLSAPAIHGKVGLRTSVTGEIVMDAV 231 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F D+ GP L+SA ++ + AE A Y R G Sbjct: 232 FVPEENAFPDVQGLKGP------FTCLNSARYGIAWGALGAAEFCWHRARQYTLERKQFG 285 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +IA RL DE + E + I K C Sbjct: 286 RPLAANQLVQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCG 338 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 339 KALDIARLARDMMGGNGISDEFGVARH 365 >gi|327350756|gb|EGE79613.1| glutaryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188] Length = 428 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D +++ S + G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPSSMESVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 F++ R + P L +KNK R++ T ++ + + D+ GP Sbjct: 224 GFIIER--DQCPPGTLETPAIKNKTALRASITGMIQLDSCPVPEANMFPDVEGLVGP--- 278 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLADAATD 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A DE KS E M I K C A E GG+ Sbjct: 336 AAYGTLAAVQVARLNDERKSVPE-------MISIIKRQNCDRALVGARTLQEIFGGNAAS 388 Query: 426 EERSIARH 433 +E I RH Sbjct: 389 DEYHIGRH 396 >gi|325479865|gb|EGC82950.1| putative butyryl-CoA dehydrogenase [Anaerococcus prevotii ACS-065-V-Col13] Length = 561 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 G GLTE+ G+D A + D Y L+G K F++ +P + +++ A G Sbjct: 122 GFGLTEENAGSDSAGTETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315 + + D G + +K+G RS+ T EL F D+ V + E+ K Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFK--------DVKVPKENLLGEEGKGF 232 Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363 Y A+M + G R+ +A A Y R G + +AD+A Sbjct: 233 KY---AMMILDGGRIGIASQALGIAQGAYESAKEYGLAREQFGEAVARMQHNAFILADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ AA L + D AK + Y + A + K + MA + ++A++ GGSG Sbjct: 290 TELKAARLLIY------DAAKKKDAHVPYG-MDAAMAKLYASDMAEKLTSKALQLYGGSG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452 +I+ + R+YR+S I G+ M L Sbjct: 343 FIKGVDVERYYRDSKITQIYEGTNEIMRL 371 >gi|120402485|ref|YP_952314.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119955303|gb|ABM12308.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 380 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+T + +DG Y ++G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALTCKA-VAADGGYRINGAKAWITHGGIADFYNLFARTGEGSQGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VPR E GL + + + K+G + T + N F+ D + Sbjct: 186 VPRDTE-----GLTFGKPEEKMGLHAVPTTAAHYENA--FVEADRRIGAEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA+ A+ Y++ R G +ID + L A A+ Sbjct: 239 LDSGRLGIAAVAVGLAQAALDAAVDYSQERTTFGRKIIDHQGLA------FLLADMAAAV 292 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ GG+GY + + R Sbjct: 293 DAARATYLDAARRRDAGLPYSR-HASVAKLTATDAAMKVTTDAVQVFGGAGYTRDYRVER 351 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 352 YMREAKITQIFEGT 365 >gi|330809083|ref|YP_004353545.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377191|gb|AEA68541.1| putative oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 590 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 35/322 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + A + LTE GTD+ I ++ + +DG Y ++G K F++ D + Sbjct: 154 PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQADGSYQITGSKIFITGGEQDLTENIIHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP++ D G N + +++K+G +++AT + F Sbjct: 214 VLAKLPDAPAGPKGISLFLVPKIHVDAQGMLGESNAVSCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-------- 345 G+L+G+ N + M L I + S A YA+ R S Sbjct: 274 ASGWLIGEANKGLAAMFTMMNYERLSIGIQGIGCAEASYQNARRYAQERIQSRSPAGAQA 333 Query: 346 ----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARI 395 +I P ++R + + A + + D AK R + A + Sbjct: 334 KDKIADPIIVHPDVRRMLLSMKAMTEGGRAFACYVGQQLDLAKFCEHSQERHDAEALVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 394 LTPVAKAFFTDTGLDSCIHGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLL 453 Query: 456 NLLEKGT-NLFEQLFSTLEQDL 476 G + +LF+T +D Sbjct: 454 GRKVVGNGGVALRLFTTQIRDF 475 >gi|170691314|ref|ZP_02882479.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170143519|gb|EDT11682.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 396 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AE+ + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E IARH Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364 >gi|126697968|ref|YP_001086865.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile 630] gi|254974039|ref|ZP_05270511.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-66c26] gi|255091425|ref|ZP_05320903.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile CIP 107932] gi|255099539|ref|ZP_05328516.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-63q42] gi|255305396|ref|ZP_05349568.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile ATCC 43255] gi|255313085|ref|ZP_05354668.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-76w55] gi|255515842|ref|ZP_05383518.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-97b34] gi|255648935|ref|ZP_05395837.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile QCD-37x79] gi|260682146|ref|YP_003213431.1| acyl-CoA dehydrogenase [Clostridium difficile CD196] gi|260685744|ref|YP_003216877.1| acyl-CoA dehydrogenase [Clostridium difficile R20291] gi|306519049|ref|ZP_07405396.1| acyl-CoA dehydrogenase family protein [Clostridium difficile QCD-32g58] gi|115249405|emb|CAJ67220.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile] gi|260208309|emb|CBA60754.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile CD196] gi|260211760|emb|CBE02105.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile R20291] Length = 377 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + + D Y L+G K F+++ P D I++A + G Sbjct: 121 FGLTEPGAGSDAGGQQTTAELVGDH-YILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGT 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVED 311 + + +G ++K+G R T +L F N LLG ++ G +E Sbjct: 180 SAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVPKENLLGKEGQGFKIAMGTLEV 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I + A +++ + +L EA+ Y ++R G + + IAD+ + AA Sbjct: 240 GRIGV----AALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQFTIADMETKVCAARG 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A D ++E+A A KY+ ++A V +A++ GG G+I++ I Sbjct: 296 LVYDAAQKRDAGMRVAQESAMA-------KYYASEIANEVAYKALQLHGGYGFIKDYEIE 348 Query: 432 RHYRESPANSILLGS 446 R YR++ SI G+ Sbjct: 349 RMYRDARIVSIYEGT 363 >gi|17545475|ref|NP_518877.1| glutaryl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427767|emb|CAD14286.1| probable glutaryl-coa dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 435 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 20/263 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y LSG K W + Sbjct: 153 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLSGAKMWITN 211 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ F Sbjct: 212 SPIADVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDEVF- 270 Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-- 353 + + N+ G V +K L+SA ++ + AE+ + R++V +P Sbjct: 271 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLA 327 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +I RL DE + E + I K C A Sbjct: 328 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALD 380 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E + RH Sbjct: 381 IARMARDMLGGNGISDEFGVIRH 403 >gi|311107961|ref|YP_003980814.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310762650|gb|ADP18099.1| acyl-CoA dehydrogenase, N-terminal domain protein 13 [Achromobacter xylosoxidans A8] Length = 384 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T +G + ++E G+D+ ++ + K G Y L+G K F+++ + +D ++A Sbjct: 115 PRMATGELVGAIAMSEPGAGSDLKSVRTTATK-EGGEYVLNGSKTFITNGLHADLVCVVA 173 Query: 248 QVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + + + G V ++ E G RL K+G +S T EL F LLG + Sbjct: 174 KTDAQAGARGVSLIMVETQGLAGFRRGRLLEKLGQKSLDTAELFFDGARVGQDCLLGGIE 233 Query: 304 VSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + M+ L L A+ +V+ MR ++ E + YA R V G LI+ + + Sbjct: 234 -GRGFAQLMQQLPRERLLIAVGAVATMRRAIEETVAYASTRQVFGQALIE-------LQN 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A ++ A D+ R A + K+W +M VI E ++ GG Sbjct: 286 TRFKLAECETVATIAARFVDDCIERQLAGTLDLSTAAMAKWWTTQMNCQVIDECLQLHGG 345 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y ++ I GS M Sbjct: 346 YGYMLEYPIARMYADARVGKIYGGSNEIM 374 >gi|301311218|ref|ZP_07217146.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3] gi|300830792|gb|EFK61434.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 20_3] Length = 569 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKQEGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTARYVDIYKALDDIARERKLTPEERKEQKQYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457 >gi|255319521|ref|ZP_05360735.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262378455|ref|ZP_06071612.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255303461|gb|EET82664.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262299740|gb|EEY87652.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 378 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI+ + ++ D + ++G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAISCRAERDGDE-WVINGTKQFITSGKHAQVALVFAITDKTSGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 FLVP G +++K+G ++ T + F N LLG ++ Sbjct: 182 FLVPT-----HTPGYVVANIEDKMGQHASDTATIIFENCRIPAKNLLGKEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A SV R +L A+ YA R G ++ + +AD+A I A Sbjct: 237 LEAGRIGI----AAQSVGMARAALDAAVQYANERKAFGVEIVQHQAVAFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L F A+ D +EA+ A++ A MA V +++++ GG GY+ + Sbjct: 293 ARQLVFHAASLKDAGLPCLKEASMAKLFAST-------MAERVCSDSIQIHGGYGYVTDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|148653859|ref|YP_001280952.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572943|gb|ABQ95002.1| isovaleryl-CoA dehydrogenase [Psychrobacter sp. PRwf-1] Length = 395 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 18/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + + DG Y L+G K W + P +D ++ A+ +G + Sbjct: 128 LAMSEPGAGSDVTSMKLRAEA-KDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 L+E G P Q+L +K+G R + T E+ F N F + + N+ G +++L+ Sbjct: 187 TAFLVEKGMPGFGTAQKL-DKLGMRGSHTGEMVFDNVF---VPEENIMGGLNNGVQVLMS 242 Query: 318 ---LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + A+++ V M+ + I Y R G + + +++ +AD+ + AA + Sbjct: 243 GLDYERAVLAAGPVGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAARS 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + + D R A ++R + WC + A + E ++ GG+GY E Sbjct: 303 FLYTVGKNLDMLDKRG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEY 360 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 361 PLGRLWRDAKLYEIGAGT 378 >gi|325123410|gb|ADY82933.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 600 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|294501894|ref|YP_003565594.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] gi|294351831|gb|ADE72160.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] Length = 377 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 28/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 PM GLTE G+D + + + DG Y L+G K F+++ +D +++ A Sbjct: 113 PMATGEKIGAYGLTEPSAGSDAGGMRTLA--VKDGEDYILNGSKIFITNGGEADIYVVFA 170 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 ++ E R F++ + + G + + K+G RS+ T E+ F + + N+ Sbjct: 171 RIDPNEKRTSAFIIEKDMP-----GFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENL 222 Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 E K+ ++ LD ++ V +A+ A+ YA+ R G +I Q + Sbjct: 223 LGNEGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFK 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A I AA L+++ A + +E+A ++K + A V EA++ Sbjct: 283 LADMATSIEAARLLTYQAAWLESQGLPYGKESA-------MSKLYAGDTAMKVTTEAVQV 335 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + L K Sbjct: 336 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRYLAK 377 >gi|78042819|ref|YP_360157.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77994934|gb|ABB13833.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 381 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----V 253 GLTE GTD ++ + K D Y L+G K F+++ ++ +++ A V+ + Sbjct: 123 FGLTEPSAGTDAGSLKTTAVKDGD-YYVLNGSKIFITNGGEAEIYVVFATVDKNKRHKGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V E G+P G + + + K+G RS+ TVEL F N + N+ + K Sbjct: 182 SAFIV----EKGTP-GFNFGKKEKKMGIRSSPTVELIFENC---RIPKENLLGEEGQGFK 233 Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L LD + ++ V +A+ A+ YA+ R G + + + +AD+A I Sbjct: 234 IALSTLDGGRIGIAAQAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQ 293 Query: 368 AATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA L + A N+ K+ A + K + + A V +A++ GG G Sbjct: 294 AARLLVYHAAWLESNNLPYGKA-----------ASMAKLFAAETAMEVTTKAVQIFGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + R R++ I G+ Sbjct: 343 YTREYPVERMMRDAKITEIYEGT 365 >gi|23099150|ref|NP_692616.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22777378|dbj|BAC13651.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 380 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 47/273 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-------EGR 252 GLTE G+D T K+ Y ++G K F+++ FI + V R Sbjct: 123 FGLTEPNAGSDSGG-TKTTAKVDGDDYIINGEKCFITNASYAKFITVTAVTEINKDGRNR 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + LVP GL +K+G R + T E+ +L D+ V P ++ Sbjct: 182 ISAILVPT-----DTPGLTITSNYDKMGVRGSDTAEI--------VLNDVRV---PRSNL 225 Query: 313 ---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + L LD +S++ + V +A+A + YA+ R G + + ++ Sbjct: 226 LGTEHKGHPQFLQTLDGGRISIAALGVGIAQAALDKALAYAKERKQFGKSISNFQAIQFK 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A+++ A + + A DE K+ S+EAAYA++ A T +A++ Sbjct: 286 LADMAMEVELARNMVLKAAWLKDEGKNFSKEAAYAKLFATETATRSAN-------QAIQI 338 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG GY+ E + R+ R+ A + +G G + + Sbjct: 339 HGGYGYMREYEVERYLRD--AKLLEIGEGTSEI 369 >gi|302343873|ref|YP_003808402.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301640486|gb|ADK85808.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 387 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 23/275 (8%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G +TE G+D+ AI+S D + LSG K W ++P++D + A + G Sbjct: 123 GFAITEPNAGSDVMAISSVAVDKGDH-FELSGAKTWISNAPVADCVVFYAYTDRAAGSKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 + + D N +K+G+ + T E+ G + N+ P + KI+ Sbjct: 182 LSAFVVDLKDNPAVRVSTLDKLGSHCSPTGEIVLD---GARVPRENLLGRPGDGAKIVFG 238 Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A V + L +A+ YA R G + +++ IA +A ++ A Sbjct: 239 SLNQTRLQAAAGGVGLAQACLDQAVAYANSREQFGRPIAQNQMIQDQIARMATEVECARL 298 Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L +R A D+ + E A A KY ++A +AM +G GY E + Sbjct: 299 LVYRAAWQKDQGRLDNGREVAMA-------KYKAGEVAAMCAEQAMRILGAYGYSTEYPV 351 Query: 431 ARHYRESPANSILLGSGN----AMVLDVLNLLEKG 461 AR++R++P ++ GS N + LD L L + G Sbjct: 352 ARYHRDAPTYYMVEGSANICKWIVALDELGLRKAG 386 >gi|330961142|gb|EGH61402.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 600 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + +DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPATDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L EDGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNEDGSLGTRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGATMLGYSGYLYSL----EYARDR--P 324 Query: 346 GGILID------QPV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D +PV ++A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPDSKPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTETGETDDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KQAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|327282658|ref|XP_003226059.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Anolis carolinensis] Length = 410 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 34/276 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + + D + L+G K W ++ + A ++ A + + Sbjct: 150 FALSEPGNGSDAGAASTVARLVGDE-WVLNGTKAWITNAWDAAATVVFATTDKGLKHKGI 208 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R+++T L F + LLG+ + Sbjct: 209 SAFLVPM-----PTPGLSLGKKEDKMGIRASSTANLIFEDCRIPKDNLLGEEGMG----- 258 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LDS + ++ + +A+A + YA +R G + ++ +AD+AL Sbjct: 259 -FKIAMQTLDSGRIGIASQALGIAQAALDCAVDYAEKRMAFGAPITKFQAIQFKLADMAL 317 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K ++EAA A++ A + A ++ +A++ +GG GY Sbjct: 318 ALESARLLTWRAAMLKDNGKPYTKEAAMAKLSA-------SEAATSISHQAIQILGGMGY 370 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + E RHYR++ I G+ L + L K Sbjct: 371 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 406 >gi|288922120|ref|ZP_06416323.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288346522|gb|EFC80848.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length = 385 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 18/245 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCFLV 258 LTE+ G+D A + + ++ D + ++G K F++ +P++D F++ A+ + + G + Sbjct: 122 LTEENAGSDPAGLATSARRDGDD-WVINGAKRFITNAPVADVFMVFARTDPDAKGGRGIT 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKI 314 ++E G+P GL +K+G T ++ + + G+ V G M+ Sbjct: 181 AFMVERGTP-GLGVGPKDHKMGQAGAWTADVTLDDVRVPASTVIGGEDGVGRGYATAMRC 239 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + + A + V + L E++ YA R G ++ + +++ +AD A D+ AA AL Sbjct: 240 LAHGRIHIAALCVGLTQRLLDESVAYAASRVQGGSVIGEHQLVQGLLADSATDLYAARAL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +A FD+ RI KY+ + V A++ GG+GY+ + R Sbjct: 300 VTEVAAGFDDGSD-------TRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVER 352 Query: 433 HYRES 437 YR++ Sbjct: 353 FYRDA 357 >gi|253571951|ref|ZP_04849356.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6] gi|251838548|gb|EES66634.1| acyl-CoA dehydrogenase [Bacteroides sp. 1_1_6] Length = 568 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 36/343 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + DG + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEKDGCWLLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R+++K+G + T EL + L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVDVRRIEHKLGIHGSPTCELVYKKAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKGKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTARYVDIYKALDDISRERKLTPEERLEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQL 468 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L FE + Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYLATIREFETV 466 Query: 469 FSTLEQD-LGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 + E + L S KK+ S + KE D+ L F ++ Sbjct: 467 PCSPEMEPLMSRLKKMADQFEASTNAVKEAQDQELLDFTARRL 509 >gi|294651447|ref|ZP_06728761.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292822693|gb|EFF81582.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 600 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQVEGR---- 252 LTE G+D+ I ++ + DG Y +SG K F+S+ M+D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNDDGSYAISGEKIFISAGEHDMADNIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L DGS N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNLNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGATEIQALDLL 453 >gi|292655298|ref|YP_003535195.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] gi|291370626|gb|ADE02853.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] Length = 380 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 33/296 (11%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ + + L+E G+D+ A+ + K D G W + + Sbjct: 103 NEEQKQTYLTPLNEGTDIGAFALSEPGAGSDVPAMETTAVKDGDEYVVDGGKLWISNGSV 162 Query: 240 SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 +D ++ A+ + G F+V ++DG + ++K+G++ T EL F + Sbjct: 163 ADTVVVFAKTDPDAGNKGISSFVVRPEVDDG----FVVEGTEHKLGDKGCPTAELRFDDM 218 Query: 295 F---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 LLG G V+ +K L + A S+ R +L +A+ YA R Sbjct: 219 RIPEDRLLG--GEGDGFVQALKTLNGGRITIAARSIGIARAALDDAVTYAGERE-----Q 271 Query: 350 IDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 DQP+ +K +AD+ + AAT L + A+ ++ +EAA A++ + Sbjct: 272 FDQPIGDFQAIKHELADMDTKVQAATLLMHKAADLKMRDETFIKEAAQAKL-------YA 324 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +++ V E ++ GG GY ++ + R+YR++ N I G+ + + + L+K Sbjct: 325 SEISREVANEGIQIHGGYGYTKDFAAERYYRDAKLNEIYEGTSEILRNTIGDWLQK 380 >gi|168183859|ref|ZP_02618523.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf] gi|237795619|ref|YP_002863171.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4 str. 657] gi|182673115|gb|EDT85076.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Bf] gi|229262853|gb|ACQ53886.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum Ba4 str. 657] Length = 377 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGNHYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWEGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EAI Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGKPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|148652718|ref|YP_001279811.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571802|gb|ABQ93861.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 594 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE GTD+ I ++ DG Y +SG K F++ D ++LA+ EG Sbjct: 166 LTEPHAGTDLGIIKTKATPNEDGSYAISGTKIFITGGEHDLTENIIHLVLAKTPNAPEGS 225 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + + G N L +++K+G + +AT + F G+++G+ N Sbjct: 226 KGISLFVVPKFIVNADGSLGERNALAAGSIEHKMGIKGSATCVMNFDGAKGWMVGEENTG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + M + + + G ++ A YA R +I Sbjct: 286 LASMFVMMNYERVTMGLQGLGGTELAYQNAAAYALDRGQGRSDTQIQSPEKPADAIIHHA 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKM 407 ++R + + + A+ + +A DE+K + AA ++ PI K + Sbjct: 346 DVRRMLLNARANAEASRCFAMYVAKQLDESKFSIDPENAKAAAARVALLTPIAKAFLTDK 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + + GG GYI E + + R++ + I G+ LD+L Sbjct: 406 ALEATVDCQQVFGGHGYIREWGMEQIVRDTRISQIYEGANGIQALDLL 453 >gi|332291020|ref|YP_004429629.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169106|gb|AEE18361.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 394 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 17/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + K D Y ++G K F+++ + SD I+ A+ +G + Sbjct: 125 LCITEPFGGSDVAGMRTTAVKDGDH-YVINGSKTFITNGVYSDYLIVAAKTAPELGGKGM 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L D G+ +L +K+G R++ T E+ F N L+G+ N G + Sbjct: 184 SIFLLDRDMPGVSATKL-DKLGWRASDTGEIAFDNVKVPVANLMGEENAGFGYIMQHFAS 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSF 374 L I + + ++ A+ Y + R ++ G+ ID+ ++ +A+ ++ + A ++ Sbjct: 243 ERLIMGINAHARAEYAIEYALDYMKER-MAFGVTIDKFQALRHKLAERQAEVEMSKAFNY 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A ++ + +EA +++ A K+A VI + ++ +GG GY+EE +AR Sbjct: 302 TIAYRLNKGEYVVKEATMSKLTA-------TKIADEVIYDCLQMLGGYGYMEEYPLARML 354 Query: 435 RESPANSILLGSGNAMVL 452 R+S I G G + +L Sbjct: 355 RDSRLGPI--GGGTSEIL 370 >gi|328869223|gb|EGG17601.1| acyl-Coenzyme A dehydrogenase [Dictyostelium fasciculatum] Length = 426 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 36/263 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ + D + L+G K W ++ + FI++A V+ VG + Sbjct: 169 LSEAGSGSDAFALKTRAEAKGD-YFVLNGTKMWITNAQEAGVFIVMANVDPSVGYKGITA 227 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 L D G+ + ++K+G RS++T E+ +L D+ V P E++ Sbjct: 228 FLVDRDTPGVSIGKKEDKLGIRSSSTCEV--------VLQDVKV---PKENILGHLGKGY 276 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ I L+ + ++ + LA+ + Y +R G L D M+ AD+A+DI Sbjct: 277 KLAIEGLNEGRIGIAAQMIGLAQGAFDSTMPYIMQRTQFGKPLADFQGMQFTYADLAVDI 336 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARI-MAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A L++ A R +EA + A + K C ++A V + + +GG G+ Sbjct: 337 EAGKLLTYNAA--------RMQEAGLPFVHQASMAKLHCSRVAEKVASACISMMGGVGFT 388 Query: 426 EERSIARHYRESPANSILLGSGN 448 +E R++R+ I G+ N Sbjct: 389 KEFDAERYFRDCKVGQIYEGTTN 411 >gi|296165235|ref|ZP_06847782.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899424|gb|EFG78883.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 399 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 20/289 (6%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S V +A + P + + + + R PT M + LG+TE G+D+A Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + ++ + D Y ++G K F++S + F+ A G G V L+ D + G Sbjct: 157 NLRTRAVRDGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R +K+G R + T EL F + L+G N +G ++ M+ L A+ + + Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPAENLVGAAN--SGFLQIMQQFQAERLGIAVQAYAT 273 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +L A +AR R G L + V++ +A++A + A + + + + Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQVIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E + MA T + C V+ EA++ GG GY+ E I RHYR+ Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375 >gi|290967961|ref|ZP_06559510.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] gi|290781867|gb|EFD94446.1| butyryl-CoA dehydrogenase [Megasphaera genomosp. type_1 str. 28L] Length = 381 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 21/270 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVGC 255 GLTE GTD ++ K +DG Y L+G K F + + ++ F + +G G Sbjct: 123 FGLTEPNAGTDALNGSTTATKNADGTYTLNGSKVFNTNGGDAEITIVFAATDKSKGAKG- 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 + ++E G+P G Y + + K+G R+ EL F + ++ N+ E KI Sbjct: 182 -MSAFIVEKGTP-GFSYGKKEVKMGIRACVQRELVFQDV---VVPAANLLGKEGEGFKIA 236 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ LD + V + +AE A+ YA R G ++ Q + +AD+ L I A Sbjct: 237 MMTLDGGRVGVGAQALGIAEGAFNKAVQYANERIQFGKPIMKQQAVAFMLADMKLKIETA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ A + +S Y+ + A I K + +A V +A++ GG G+ + Sbjct: 297 RWAVYKAAWKMGQKDVKS----YS-MDASIAKKYASDIAMQVTTDAVQVFGGYGFTRDYP 351 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLE 459 + R+ R++ I G+ + + L+ Sbjct: 352 VERYMRDAKITQIYEGTNQVQQMIISGFLK 381 >gi|229161302|ref|ZP_04289287.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] gi|228622116|gb|EEK78957.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] Length = 569 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVISAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMVIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|183220511|ref|YP_001838507.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910620|ref|YP_001962175.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775296|gb|ABZ93597.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778933|gb|ABZ97231.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 524 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 140/294 (47%), Gaps = 25/294 (8%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV--EGRVGC 255 G LTE G+D A++ ++ +++ G + L+G K F+++ P+ FI++A+ +GR Sbjct: 129 GFALTEPASGSDAASLLTKAEEVEGG-WKLNGSKTFITNGPVGQVFIVMARTSEKGRGPM 187 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 + ++E +P G ++ K+G+ ++ T EL F + LLG LN TG + Sbjct: 188 GISAFIVESDTP-GFKVSKVLKKLGHHTSMTAELVFEDMIIPKENLLGPLN--TGFMRIG 244 Query: 313 KILIYLDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 K + + + V+G M L + + YA R G + M+ + + I A Sbjct: 245 KETLEWERTVF-VAGLAGAMEFCLRKGLRYANERVQFGKPISSFYGMRDILVRNWVYIQA 303 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + +A D+ E++ ++++ ++A V + ++ GG GY++E Sbjct: 304 ARRLIYWVAERKDKGIPSPLESSLGKLIS-------SELAEDVAKDTVQLFGGYGYMKEY 356 Query: 429 SIARHYRESPANSILLGSGNAMVL-DVLNLLEKGTNLFEQLFSTLEQDLGSSGK 481 ++ R YR+ +I G G + + +++ L G F++ F +E +S K Sbjct: 357 AVERFYRDVKLGTI--GGGTSEIQRSIISSLYPGKEKFQKEFKRIESPSNTSDK 408 >gi|115378539|ref|ZP_01465695.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca DW4/3-1] gi|310822382|ref|YP_003954740.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115364461|gb|EAU63540.1| acyl-CoA dehydrogenase, long-chain specific [Stigmatella aurantiaca DW4/3-1] gi|309395454|gb|ADO72913.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 379 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 13/266 (4%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P K LG++E G+D+A + + +I Y ++G K ++++ FI L Sbjct: 114 PALKGEKIAALGVSEPGVGSDVANMKTTA-RIDGDDYVINGSKMWITNGTRADFITLGVR 172 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306 G G + + G + +K+GN S+ T L F + ++LG N Sbjct: 173 TGEAGYGGISLVTFPTDVKGFSVSKKLDKVGNLSSDTAILFFEDCRIPRRYVLGAENEGF 232 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + L +A+ +V+GM + +A+ Y R G L+ V + + I Sbjct: 233 YSIMTNFQGERLVTALTAVAGMERMVEDALRYGTEREAFGKPLLKFQVWRHKFVEHLTAI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++ FD+ ++ +E + A++ A +A V + + GG GYIE Sbjct: 293 EAAKRLTYHAVAVFDQKENAVKEISMAKLFA-------GDLAQRVAYDCQQFFGGMGYIE 345 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 E IAR +R+ I +G G + V+ Sbjct: 346 ETPIARAWRD--IRLITIGGGTSEVM 369 >gi|30265365|ref|NP_847742.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47530907|ref|YP_022256.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188176|ref|YP_031429.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|65317319|ref|ZP_00390278.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012] gi|165871283|ref|ZP_02215932.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167635753|ref|ZP_02394063.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|167640413|ref|ZP_02398677.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|170688154|ref|ZP_02879365.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|170708036|ref|ZP_02898484.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|177651922|ref|ZP_02934505.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190569104|ref|ZP_03022003.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|196036515|ref|ZP_03103910.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|227818104|ref|YP_002818113.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|228949062|ref|ZP_04111334.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124845|ref|ZP_04254023.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|229601594|ref|YP_002869556.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] gi|254687217|ref|ZP_05151075.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066] gi|254724696|ref|ZP_05186479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055] gi|254735270|ref|ZP_05192979.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North America USA6153] gi|254744473|ref|ZP_05202153.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B] gi|254755811|ref|ZP_05207843.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum] gi|254762151|ref|ZP_05213997.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94] gi|30260043|gb|AAP29228.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47506055|gb|AAT34731.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182103|gb|AAT57479.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|164712950|gb|EDR18478.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167511633|gb|EDR87015.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|167528862|gb|EDR91619.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|170127009|gb|EDS95888.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|170667847|gb|EDT18599.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|172082626|gb|EDT67690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190559772|gb|EDV13758.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|195990848|gb|EDX54821.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|227005111|gb|ACP14854.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|228658636|gb|EEL14298.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|228810635|gb|EEM56984.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229266002|gb|ACQ47639.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] Length = 379 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 129/294 (43%), Gaps = 24/294 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E T PM + GLTE G+D + + ++ D Y L+G K F++ Sbjct: 100 KFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-- 293 + ++D +++ A + + + G + ++K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCR 218 Query: 294 -TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 LLG+ + KI + LD ++ V +A+ ++ YAR R+ G Sbjct: 219 IPVENLLGEEG------QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVAYARERYQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + Q + +AD+A D+ AA L+++ A E +E+A +++ A Sbjct: 273 KPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFA-------GD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V EA++ GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 326 AAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|160915342|ref|ZP_02077554.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991] gi|158432733|gb|EDP11022.1| hypothetical protein EUBDOL_01350 [Eubacterium dolichum DSM 3991] Length = 634 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D A T + Y L+G+K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AGGTETTAVLEGDHYVLNGNKIFITNADKADIYVVFAS 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F++ + N+ Sbjct: 172 TNPELGTKGISAFIVEKGMGGFTFGDHYDKMGIRSSSTAELIFNDV---RVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ YA+ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAYENALAYAKEREQFGKPIAQQQGIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ + E+A A++ + +A V +A++ GGS Sbjct: 289 ATKLRCARMLVYSAAELKEQHEPYGMESAMAKL-------YASDIALEVCNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMDVERAYRDAKITTIYEGT 365 >gi|293611086|ref|ZP_06693385.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826738|gb|EFF85104.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 600 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGSIGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|239940162|ref|ZP_04692099.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239986650|ref|ZP_04707314.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291443592|ref|ZP_06582982.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291346539|gb|EFE73443.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 383 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 53/306 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + + W P++ S E AIG GLTE G+D + ++ Sbjct: 95 AKTIASWGSEEQKRQWLPRLTSGE--------------AIGCFGLTEPGTGSDAGNLVTR 140 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + G Y ++G K F+++ +D ++ A+ G FLVP GL Sbjct: 141 AVR-DGGDYVVNGTKMFITNGTWADVVLLFARTNDSPGHRGVSAFLVPT-----DTPGLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIY--LDSAIMSV 325 + + K+G R AT EL +L D+ + GP L L MSV Sbjct: 195 RRTVHGKLGLRGQATAEL--------VLQDVRIPASCLLGPEGKGFPLAMSALAKGRMSV 246 Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V +A+A + YA R G + +++ ++DIA+D+ AA L++R+A+ Sbjct: 247 AAGCVGIAQAAQDAAVRYAGEREQFGKAIARHQLVQELLSDIAVDVDAARLLTWRVADLI 306 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + + A+ A++ A C A++ GG GYI+E + + R++ Sbjct: 307 DRGQDFATAASKAKLYASEAAVRCAN-------NALQVFGGYGYIDEYPVGKLLRDARVM 359 Query: 441 SILLGS 446 ++ G+ Sbjct: 360 TLYEGT 365 >gi|188992153|ref|YP_001904163.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|167733913|emb|CAP52119.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris] Length = 382 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAIKQGDGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D + G + + K+G R++AT E+EF++ ++ V E K + Sbjct: 183 TAFMVDTARAGFHRGKTEPKLGIRASATCEIEFAD---YVAQPDEVLGAEGEGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|325000273|ref|ZP_08121385.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1] Length = 371 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 33/328 (10%) Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 +++ AG ++P V+S M P + ++ +P+ R + + + + Sbjct: 67 LSRASAGIAITPLVSS-----YMAAPHLVRNGSPEQRDRWL-----SRISGGEAVAAIAV 116 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCFL 257 TE G+D+A +TS+ ++ DG + + G K F+++ ++D I+ A+ G + F Sbjct: 117 TEPGAGSDVAGLTSKARRTDDG-WVIDGRKMFITNAGLADVLIVGARSGGPRHSGITLFE 175 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 VP+ GL + K+G RS+ T E+ ++G N + + Sbjct: 176 VPK-----DAPGLSFGSPLTKMGWRSSDTREVVLDGVVVPHDAVVGAENRGFHQIMEGFQ 230 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L + A M + L + R R G L ++ +A + +D+ AA +++ Sbjct: 231 LERIALAGMGIGQAAECLDLVRAHVREREAFGAPLTGLQTVRHRVATMEIDLDAARLVTY 290 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D A + KY A +I +A++ GG+G++EE +ARHY Sbjct: 291 QAAARMDAGHPE------APVSVARAKYLAAVAANRIIDDAVQLFGGAGFVEETPVARHY 344 Query: 435 RESPANSILLGSGNAMV-LDVLNLLEKG 461 R+ A + +G G V L++L+ KG Sbjct: 345 RD--ARILRIGGGTDEVQLEILSKSMKG 370 >gi|159900483|ref|YP_001546730.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893522|gb|ABX06602.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 376 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 39/271 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D ++ + + + D Y L+G K W ++D F++ AQVEG+V FLV Sbjct: 122 FALSEPNVGSDAKSVETSARLVGDR-YVLNGRKRWMTFGQIADVFLLFAQVEGKVTAFLV 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----------FGFLLGDLNVSTGP 308 R SP G + + +G R + EL + GF L + S Sbjct: 181 ER----NSP-GFSTEPITGILGTRGSMLAELRLDDCEIPKENRLGGLGFGLAAIGTSA-- 233 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 LD SV+ V +A+A + Y R G + D ++++ + ++ Sbjct: 234 ---------LDIGRYSVAWGSVGIAQACLEACVEYTSTRRQFGVPIKDHDLVRQMMTNMI 284 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L ++ D SR+ + I KY+ A + A+A++ G +G Sbjct: 285 TNTKAARMLCYQAGYLKDSGDSRTVMETW------IAKYFASTAAMKIAADAVQLHGANG 338 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454 EE + R++R++ I+ S +++ Sbjct: 339 CSEEYPVQRYFRDAKIMEIIEASTQLQQMNI 369 >gi|111022099|ref|YP_705071.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821629|gb|ABG96913.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 388 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + +TE G+D+AAI++ D + L+G K F+S+ M +D I++A+ + G+ G Sbjct: 131 IAMTEPGAGSDLAAISTTALPDGDDL-VLNGTKIFISNGMLADFVIVVAKTDPAAGKKGV 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 L+ ++EDG G +KIG + T EL F + +LG+ N G + Sbjct: 190 SLL--VVEDGMA-GFTRNGPLHKIGLTAQDTAELVFDDVRVPRENVLGEPNDGFGYLRHN 246 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ S++ MR + +A+ Y+ R G + D + +A++A +I A Sbjct: 247 LPQERLSVAVTSMASMRRTFDQALTYSCDRTAFGRRVADFQANRFYLAELATEIEIAQCF 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R D A +E + A + K+W ++ V+ A++ GG GY+ E +A+ Sbjct: 307 TDRCI--LDAANGTLDE-----VTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYDVAQ 359 Query: 433 HYRESPANSILLGSGNAM 450 Y + I G+ M Sbjct: 360 DYLDCRGGPIYAGTTEIM 377 >gi|94500571|ref|ZP_01307102.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65] gi|94427361|gb|EAT12340.1| acyl-CoA dehydrogenase [Oceanobacter sp. RED65] Length = 386 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 47/311 (15%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 MS + AS++ + + +++ P++ S EY A LTE + G+D Sbjct: 89 MSVTNMVASVIQAVGSDEQKQNYLPRLCSGEYR------------AGAFCLTESQAGSDP 136 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GR-VGCFLVPRLLED 264 +A+ Q K G + +SG K +++S +D I+ A + G+ + CF+V + Sbjct: 137 SAMKCQANKTEKG-WQISGSKLYITSGAYADVLIVWAVTDKTAKPGKGISCFVV-----E 190 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI-YLDS 320 + G+ + +NK+G +AT E+ F N T G LLG++N + KI + L Sbjct: 191 ANRQGISIGKEENKMGQSGSATNEVIFENVVVTEGDLLGEVN------QGFKIAVGELAG 244 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++ + + +A+ AI YA+ R G + D ++ +A+ + A L Sbjct: 245 GRIGIASLALGIAQSAHDYAIEYAKERQQFGQSIADFQGIQWMLAEAETKLNATRLLVL- 303 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 EA R E+ A + K + + + A++ +GG+GY+++ + + R Sbjct: 304 ------EAAHRKEQGQEFATQASMAKLFASEEGNRICYNALQILGGAGYLKDYPLEQKVR 357 Query: 436 ESPANSILLGS 446 + SI G+ Sbjct: 358 DIRITSIYEGT 368 >gi|331698310|ref|YP_004334549.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326952999|gb|AEA26696.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 385 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 37/283 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W P++ S E V GLTE G+D + +++ ++ D Sbjct: 100 TEEQKKSWLPRLASGE-------------VTASFGLTEAEAGSDPSTLSTVARRDGDDWV 146 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++ ++P++D ++ A+ G G FLVP G+P GL +K+G Sbjct: 147 INGSKRYITNAPVADVIMVFARTNPDAPGNRGISTFLVPA----GTP-GLSTGPKDHKMG 201 Query: 281 NRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLA-E 334 T ++ + + G+ + G K L + I +V GM L E Sbjct: 202 QFGAWTSDVHLDDVRVPAEAVVGGEAGIDNGFRIAAKCLAHGRVHIAAVCVGMAARLVHE 261 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + YAR R G + +++ +AD D+ A AL + A +FD+ + A A Sbjct: 262 TVEYARARQAGGKPIAAFQLVQGMVADSVTDLHAGRALVRQAARAFDDGSDKVAGPAAA- 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 KY+C +M V A++ GG+GY+ ++ R YR++ Sbjct: 321 ------KYFCSEMVGRVADRAVQVHGGAGYMRGVAVERFYRDA 357 >gi|226358241|ref|YP_002787980.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226319884|gb|ACO47878.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 598 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 37/317 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + L+E G+ +A IT+ DG Y ++G K ++S + ++LA+++G Sbjct: 161 MALSEPHAGSGLADITTTAAPRGDGTYSITGTKMWISGGEHELSENIVHLVLARIQGAPA 220 Query: 253 ----VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + FLVPR + +DGSP N + L +K+G R L F T G L+G Sbjct: 221 GVKGISLFLVPRYRVQDDGSPGECNHVVLAGLNHKMGYRGTTNTLLNFGEGGETIGELVG 280 Query: 301 DLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-- 354 + + + +I + + + ++ +G SL A + R S + PV Sbjct: 281 EPGRGLAQMFYMMNEARIGVGMGAVMLGYAGYLASLEYARERLQGRPASQKDPLSPPVPI 340 Query: 355 -----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-----AYARIMAPITKYWC 404 ++R + + AL ++ D+ ++ E+ ++ P+ K W Sbjct: 341 IRHADVRRLLLRQKAFVEGGLALGLYASSLVDDLQTGPEDGREDVHLLLDLLTPLVKSWP 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGT 462 K + +++A++ +GG+GY + + +YR++ N I G+ D+L + + G Sbjct: 401 SKYSQEALSDAIQVMGGAGYTRDFPVEMYYRDNRLNPIHEGTEGIQGNDLLGRKITQAGG 460 Query: 463 NLFEQLFSTLEQDLGSS 479 + L S ++ DL +S Sbjct: 461 RGLQVLLSRIQADLRAS 477 >gi|163940124|ref|YP_001645008.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163862321|gb|ABY43380.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis KBAB4] Length = 569 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 RFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|108798473|ref|YP_638670.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119867574|ref|YP_937526.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108768892|gb|ABG07614.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119693663|gb|ABL90736.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 379 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 35/266 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 LGLTE G+D+AAI + ++ D + L+G K F++S + D I+L + R G Sbjct: 124 LGLTEPGAGSDLAAIKTSARRDGDHL-VLNGQKTFITSGATCDLAIVLVRTGERDGRGTT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 +E+G+P G R +KIG R+ T EL F + FG + +L Sbjct: 183 FVAVENGTP-GFERGRPMHKIGRRAQDTAELFFDDCRVPVSNIIGEPGRGFGCAIANL-- 239 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I + ++ +L + +AR+R G L ++ IA + Sbjct: 240 ---PRERLSIAVAAVASARH------ALELGLEHARQRSAFGAPLAQLQSVRMQIAGMHT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI R + ++ + + EAA A KY ++ V+ ++ GG GY Sbjct: 291 DIVVLQEYVDRCVVALNDGELTAAEAAGA-------KYKATELQWEVLDRVLQLFGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 +EE IAR +R++ I G+ M Sbjct: 344 MEEYPIARMWRDARIQRIYGGANEVM 369 >gi|254497654|ref|ZP_05110436.1| acyl CoA dehydrogenase, short chain specific [Legionella drancourtii LLAP12] gi|254353128|gb|EET11881.1| acyl CoA dehydrogenase, short chain specific [Legionella drancourtii LLAP12] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 48/327 (14%) Query: 142 LMAQLEAGHLMSPSVTS-----ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 L QL G + + + S +++ P + W PK+ + + V Sbjct: 72 LFEQLATGCISTSAYLSIHNMVTTVIDRYAGPELRAKWGPKLTAMD-------------V 118 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255 LTE G+D A++ ++ K D Y L+G K F+S SD ++ + + Sbjct: 119 LSSYCLTEPESGSDAASLKTKAIKDGD-YYVLNGSKAFISGGSASDVYLCMVRTGDESHH 177 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303 + L+E +P GL + +L+ K+G R+ T L F N GF + LN Sbjct: 178 GISCLLIEKDTP-GLTFGKLEKKMGWRNQPTCMLYFENCRVPIVNRVGDEGIGFKIA-LN 235 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G ++ A S+ G L Y R R L D ++ AD+ Sbjct: 236 ALNGG--------RVNIASCSLGGALACLRLTQQYMRERRQFHKPLKDMQALRFYFADML 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 D A + +R AN+ D R A + + K +A + +AM+ GG G Sbjct: 288 TDYENARLMVYRAANAMDNNDPR------APMYCAMAKRLATDVAFHISDKAMQLHGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ + I R +R+ + IL G+ M Sbjct: 342 YLRDYQIERIFRDLRVHQILEGTNEIM 368 >gi|147906709|ref|NP_001080869.1| short-chain acyl-CoA dehydrogenase [Xenopus laevis] gi|33417079|gb|AAH55986.1| Acads protein [Xenopus laevis] gi|54311373|gb|AAH84756.1| Acads protein [Xenopus laevis] Length = 409 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 18/268 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A ++ K+ + L+G K W ++ + A ++LA + + + Sbjct: 149 FALSEPGNGSDAGAASTTA-KLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGI 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + GL + ++K+G R+++T L F + + N+ P KI + Sbjct: 208 SAFLVEMPTPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRKNLLGQPGMGFKIAMQT 264 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + + +A + YA +R G + ++ +AD+AL + +A L Sbjct: 265 LDAGRIGIASQALGIGQAAIDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLL 324 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D K+ S+EAA A++ A + A + +A++ +GG GY+ + R Sbjct: 325 TWRAAMLKDNKKTFSKEAAMAKLAA-------SEAATQISHQAIQILGGMGYVTDMPAER 377 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 HYR++ I G+ L + N L K Sbjct: 378 HYRDARITEIYEGTSEIQRLVIANQLLK 405 >gi|322698244|gb|EFY90016.1| acyl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102] Length = 447 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 130/300 (43%), Gaps = 35/300 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K W PK+ T+ L+E G+D A+ ++ ++ +DG Sbjct: 170 LKKKWLPKL--------------ATNTVASFCLSEPVSGSDAFALATRAEETADGFKING 215 Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G W +S + FI+ A ++ G + ++E G+P G + + K+G R+++T Sbjct: 216 GKMWITNSKEAGFFIVFANLDPSKGYRGITAFVVEKGTP-GFSIAKKEKKLGIRASSTCV 274 Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-R 340 L F N G + G + + +I I +++ S A+ Y Sbjct: 275 LNFDDVVVPKENILGERGHGYKYAIGLLNEGRIGIAAQMTGLALG----SFENAVKYVWN 330 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G ++ + M+ IA +IAAA AL + A + + ++AA A++ Sbjct: 331 DRRQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGEDFVKDAAMAKL----- 385 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E +++R+S +I G+ N + + LL+K Sbjct: 386 --YASQVAGRVAGLAVEWMGGMGFVREGLAEKYWRDSKIGAIYEGTSNIQLNTIAKLLQK 443 >gi|184157715|ref|YP_001846054.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|183209309|gb|ACC56707.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EANTP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+HYA R G + + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPISNFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D ++ S EA+ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDNGENISTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E +I R YR+ Sbjct: 347 EYAIERFYRD 356 >gi|188592155|ref|YP_001796753.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|170938529|emb|CAP63516.1| PUTATIVE ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 392 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257 LTE G+D A+ + ++ D Y L+G K F++ +P++D F + A+ + G G Sbjct: 122 FALTEPEAGSDATALQTTARQDGDH-YVLNGSKCFITNAPIADLFTVFARTDPGTPGAHG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + L+E G+P GL + K+G + ++ L D V + K + Sbjct: 181 ISAFLVERGTP-GLSTSEPERKMGQHGSPVGDV--------YLKDCRVPASAIVGGKPNV 231 Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +A+ +++ R++LA E + YA +R G + D ++++ IAD Sbjct: 232 GFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGQPIADYQLVQQMIADSNT 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA AL A D + + EA+ + K + +MA V A++ GGSGY Sbjct: 292 ELHAARALVLETARKRDAGEDVTMEAS-------MCKLFASEMAGRVADRAVQVFGGSGY 344 Query: 425 IEERSIARHYRE 436 + R YR+ Sbjct: 345 MARTVAERFYRD 356 >gi|332993290|gb|AEF03345.1| acyl-CoA dehydrogenase-like protein [Alteromonas sp. SN2] Length = 600 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 53/339 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 + +A++V + + PK+ + ++ T + LTE G+ +A I Sbjct: 130 TAAAANVVKHFANEETKQAFLPKMLTGDFTGT-------------MALTEPHAGSGLADI 176 Query: 215 TSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLVP--RL 261 + DG Y + G K ++S+ +SD + +LA++ G + F+VP RL Sbjct: 177 RTSATLHEDGTYRVKGSKLYISAGEHELSDNIVHLVLAKIPGGPAGVKGISLFVVPKYRL 236 Query: 262 LEDGSP---NGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVED 311 E+G+P N + L +K+G R + L F + G+L+G+ L + + Sbjct: 237 DENGNPGPRNDVTLAGLIHKMGYRGTTSTALTFGENGDCHGYLVGEPHQGLRYMFMMMNE 296 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------SGGILIDQPVMKRAI----- 359 +I + +A++ G R SL A + R +I+ ++R + Sbjct: 297 ARIGVGYGAAMIGYRGYRYSLEYAKDRTQGRAAPKLAPEDEATPIINHGDVRRMLLAQKS 356 Query: 360 ---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AL + +T + L D AK R+E + ++ P+ K W + P A+ Sbjct: 357 YCEGGMALCLYGSTLID-ALETEEDTAK-RTEISQLLELLTPVFKAWPSEFGPKANDLAI 414 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + +GG+GY E + + +R++ N I G+ LD+L Sbjct: 415 QILGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453 >gi|297618236|ref|YP_003703395.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297146073|gb|ADI02830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 380 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 29/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D +++ + +K+ D Y L+G K F++ +++ + + A+ V+G G Sbjct: 125 LTEPNAGSDASSMNTFARKVGDE-YILTGTKCFITHGGIANMYTVFAKTDRSVKGTKGIS 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP G GL ++++K+G+R++ E+ F + DL G E KI Sbjct: 184 AFLVP-----GDAPGLSMGKVEDKMGDRASHIAEVIF-DEVRVPARDLLGKEG--EGFKI 235 Query: 315 LIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD MS+ V +A EA++YA++R G + Q + +AD+A +I A Sbjct: 236 AMQTLDRTRMSIGAAAVGVARRAYEEALNYAKQRVQFGKPIASQQAIAFMLADMATEIEA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A AL ++ A D + A A++ A +A V +A++ +GG GY++E Sbjct: 296 ARALVWKAAWEIDHGNPDPKLGAMAKLYA-------GDVAMKVAVDAVQVLGGYGYMKEY 348 Query: 429 SIARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 349 PVEKLMRDAKILQIYEGT 366 >gi|256379667|ref|YP_003103327.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255923970|gb|ACU39481.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 381 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 34/287 (11%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 +W PK+ S E+ +G + ++E G+D+ IT++ ++ DG Y LSG Sbjct: 112 EWLPKLASGEH--------------VGAIAMSEPGAGSDLQGITTRARRDGDG-YVLSGS 156 Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+S+ +D I+ A+ + G + L+ E G R+ +K+G + T EL Sbjct: 157 KTFISNGAQADLVIVAAKTDPEKGAAGISLLVVEAARAEGFRRGRVLDKLGLKGQDTSEL 216 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344 F + LLG G V+ M+ L L A+ SV+G+ +L + Y ++R Sbjct: 217 FFDDVRLPASALLG--GEGQGFVQLMRQLPQERLVIAVSSVAGIEAALELTLDYVKQRSA 274 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYW 403 G LI + +A+ A + R+A +F DE A + K+W Sbjct: 275 FGRELIKFQNTRFTLAECATEA--------RVARAFVDECVGLHLRGELDVPTAAMAKWW 326 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + V+ E ++ GG GY+ E IAR + ++ I G+ M Sbjct: 327 STERLCRVVDECVQLFGGYGYMTEYPIARAWADARVQKIYGGTNEIM 373 >gi|156976709|ref|YP_001447615.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116] gi|156528303|gb|ABU73388.1| hypothetical protein VIBHAR_05484 [Vibrio harveyi ATCC BAA-1116] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA + V + PK+ + ++ LG LTE G+D A++T+ Sbjct: 96 MVASFASEEVKDAFCPKLITGDF----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K D Y L+G K F+S +D +++A+ G G V + +G+ Y R + Sbjct: 140 ATKQGDN-YILNGGKTFISGAGDTDVLVVMART-GDAGARGVSAFVVPADADGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G V MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|87120053|ref|ZP_01075949.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121] gi|86164755|gb|EAQ66024.1| putative acyl-CoA dehydrogenase [Marinomonas sp. MED121] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 49/383 (12%) Query: 95 DKVEFHPAWHALLRRSIHDGLHCSIWDR-SFEPV-VRKQAHKIRAARLYL--------MA 144 D+V F A R + + + WD SF PV V ++A ++ A LY ++ Sbjct: 8 DQVAFSDMATAFARSELEP--NAAKWDEESFFPVDVIRKAGEMGFASLYSPESVGGLGLS 65 Query: 145 QLEAGHLMSP-SVTSASMVALMTTPRVHK--DWAPKIFSREYDPTNKAPMQKTSVAIG-L 200 +L++ + S+ S A +T +H W F++ A ++ A+G Sbjct: 66 RLDSSIIFERLSMGCTSTTAYLT---IHNMVTWMVTSFAKPSVLEKYAESLISAQALGSY 122 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + +K D Y L+G K F+S S +++ G G V Sbjct: 123 CLTEPNAGSDAASLKTTAKKEGDH-YILNGSKVFISGAGSTDVLVVMARTGGPGARGVSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308 ++ D +G+ Y R ++K+G S T + F N GF+L + G Sbjct: 182 IVVDAHSDGISYGRKEDKMGWNSQPTRMISFDNVKVPVENLLSEEGEGFVLAMKGLDGGR 241 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + A S+ + +L +A Y + R G + D ++ +AD+A ++ A Sbjct: 242 I---------NIASCSLGTAQQALNQARDYMQERKQFGKQIGDFQGLQFRLADMATELLA 292 Query: 369 ATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L A+ D K + A A+ A + C EA++ GG GYI+E Sbjct: 293 ARQLVRLAASKLDLGHKDATTYCAMAKRFATDVGFKVCD-------EALQIFGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + R+ R++ + IL G+ M Sbjct: 346 YPMERYVRDTRVHRILEGTNEIM 368 >gi|224368717|ref|YP_002602878.1| Acd6 [Desulfobacterium autotrophicum HRM2] gi|223691433|gb|ACN14716.1| Acd6 [Desulfobacterium autotrophicum HRM2] Length = 600 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 57/370 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+A IT+ + DG Y L G+K F+S D +LA++E Sbjct: 163 LTESDAGSDLAGITTMAKDNGDGTYSLEGNKIFISGGEQDLTENIVHPVLARLEDSPAGI 222 Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + FLV RL DG+P N + ++ K+G +AT LE G LLG+ Sbjct: 223 KGISLFLVTKYRLNPDGTPGEFNNVVCTGIEEKMGLHGSATCSLELGGKGQCIGTLLGEK 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGI----------L 349 N M +++ ++ + G + A A+ YAR+R S + + Sbjct: 283 NKGMAA---MFLMMNEARQMVGLQGQANASAAYMYALDYARQRIQSKSLTAPAGTPPVAI 339 Query: 350 IDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYARIMAPITKY 402 I+ P +KR + + + +L + RLA + D+++ R + ++ PI K Sbjct: 340 INHPDVKRQLLMMKSWVEGMRSLVYYTGLCHDRLAIAADDSE-RQFYSTLLEVLTPIIKG 398 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LE 459 + A V ++ GG G+IEE +++ R+ + G+ +D++ + Sbjct: 399 YITDRAFDVCNHGVQIYGGYGFIEEFPVSQLLRDCRIFMLYEGTNGIQAMDLVGRKLGMH 458 Query: 460 KGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYR 519 KG F +E K IT R+ L + RF T +A +A R Sbjct: 459 KGEP-FIHFLGLIE--------KTITASREVKGLESLADSMQRFFTNYAEVAHEISA--R 507 Query: 520 AGMNDIADVF 529 A + +VF Sbjct: 508 AASGKVMEVF 517 >gi|281355274|ref|ZP_06241768.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC BAA-548] gi|281318154|gb|EFB02174.1| acyl-CoA dehydrogenase domain protein [Victivallis vadensis ATCC BAA-548] Length = 572 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/359 (21%), Positives = 165/359 (45%), Gaps = 50/359 (13%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + + + + P S EYD + + LTE G+D+ ++ + Sbjct: 146 AETINFFGSDEQKEKYLPGFASGEYDGS-------------MDLTEPDFGSDLQSVRLRA 192 Query: 219 -QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLK 276 Q G + L+G K F+++ + ++LA+ E G + + + P L +R++ Sbjct: 193 WQDEKTGQWYLNGMKRFITNGCAKVHLVLARSEEGTSDGRGLSMFICEACPQ-LVVRRIE 251 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 NK+G AT EL++++ L G G ++ ++ ++ A +++SG + +AEA Sbjct: 252 NKLGIHGVATTELQYNDVPAVLCGKRRF--GLIK--YVMSLMNGARVAISGQAIGIAEAA 307 Query: 337 HYARRRHVSGGIL----IDQ-PVMKRAIADIALDIAAATALSFRLANSFD---------- 381 + R++ + + IDQ P + +A + + + AA AL + D Sbjct: 308 YREARKYAAERMQFKKSIDQFPAIYDMLAGMKVKLTAARALLYETTRVVDLRNGYTHLVE 367 Query: 382 -----EAKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A R+++ Y A ++ P+ K +MA V +A++ GG+G++++ + R Sbjct: 368 HGENVSADDRAKQKYYNKVAAVLTPMCKALATEMANQVAYDAIQIHGGTGFMKDFNAERF 427 Query: 434 YRESPANSILLGSGNAMVLDVL-NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 YR++ +I G+ V+ + ++++ ++ Q ++L+ +GK + LRD++ Sbjct: 428 YRDARITNIYEGTTQLQVVAAIGGVIQRDNDVRIQELASLD----YTGK--LARLRDTV 480 >gi|257066017|ref|YP_003152273.1| acyl-CoA dehydrogenase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256797897|gb|ACV28552.1| acyl-CoA dehydrogenase domain protein [Anaerococcus prevotii DSM 20548] Length = 561 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 G GLTE+ G+D A + D Y L+G K F++ +P + +++ A G Sbjct: 122 GFGLTEENAGSDSAGTETTAVLKGDH-YVLNGKKIFITNAPEAQTYLVTAVTTPGKGNHG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKIL 315 + + D G + +K+G RS+ T EL F D+ V + E+ K Sbjct: 181 ISMFIVDKDFEGFTFSEPYDKLGIRSSVTAELHFK--------DVKVPKENLLGEEGKGF 232 Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363 Y A+M + G R+ +A A Y R G + +AD+A Sbjct: 233 KY---AMMILDGGRIGIASQALGIAQGAYESAKEYGLAREQFGEAIARMQHNSFILADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ AA L + D A+ + Y + A + K + MA + ++A++ GGSG Sbjct: 290 TELKAARLLIY------DAAQKKDAHVPYGK-DAAMAKLYASDMAEKLTSKALQLYGGSG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452 +I+ + R+YR+S I G+ M L Sbjct: 343 FIKGVDVERYYRDSKITQIYEGTNEIMRL 371 >gi|90416082|ref|ZP_01224015.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] gi|90332456|gb|EAS47653.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] Length = 582 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 53/343 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250 + LTE + G+D++A+ ++ D Y +SG K +++ +D I L E Sbjct: 152 MNLTEPQAGSDLSAVKTKAILNGDH-YLISGQKIYITWGDHSCADNIIHLVLARRPDAPE 210 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G G FLVP+ L DGS N + +++K+G S+ T L F + G+L+G Sbjct: 211 GNQGISLFLVPKFLVNSDGSLGERNDVKPVGVEHKLGIHSSPTCTLAFGDNGGAVGYLVG 270 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY-----------ARRRHVSG-GI 348 + N + +++A +SV VSL E + R V G Sbjct: 271 EENKGL-----QCMFTMMNNARLSVGHQGVSLGERAYQQAVAYAADRVQGRAAGVEGRAA 325 Query: 349 LIDQPVMKRAIADIALDIAAATALSF-------RLANSFDEAKSRSEEAAYARIMAPITK 401 +I +KR + + A+S+ R ++ DE + RS+ A ++ P+ K Sbjct: 326 IIHHSDVKRMLMQMRALTEGGRAMSYYAIAAEDRSSHHPDE-QVRSQNAQLVELLTPLVK 384 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLE 459 WC +++ + ++ GG G+IEE A+H R++ I G+ LD + L Sbjct: 385 GWCTEVSMESTSLGVQVHGGMGFIEETGAAQHMRDARILPIYEGTNGIQALDFIGRKCLR 444 Query: 460 KGTNLFEQLFSTLE---QDLGSSGKKVITI---LRDSISLCKE 496 G + L + ++ L S+ V+ + LR I C+E Sbjct: 445 DGGQAVQLLLADMQATVDQLASAHGSVVDLRNRLRHGIEQCQE 487 >gi|56963271|ref|YP_175002.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16] gi|56909514|dbj|BAD64041.1| butyryl-CoA dehydrogenase [Bacillus clausii KSM-K16] Length = 390 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 37/288 (12%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 + E T P+ K GLTE G+D A T +G Y L+G K ++++ M Sbjct: 103 TEEQKQTYLVPLAKGESLGAFGLTEPNAGSD-AGGTQTKAVFENGDYILNGEKCWITNAM 161 Query: 240 SDAFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +++ V G R+ F+VP G +K+G R++ T EL Sbjct: 162 YAQTVIITAVTGTQSNGKKRISAFIVPT-----DTPGFTITAPYDKMGVRASNTCELVLE 216 Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRH 343 + LLGD P + +Y LD +S++ + V +A+A + YA+ R Sbjct: 217 DVRVPESNLLGD------PGKGFSQFLYTLDGGRISIAALAVGIAQAAFDRALAYAKERK 270 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 + ++ +AD+A++I A + + A D +EAAYA++ A Sbjct: 271 QFSKPIGSFQAIQFKLADMAMEIELARNMVHKAAALKDAGAPFGKEAAYAKLFA------ 324 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +MA +A++ GG GY+ E + R R+ A + +G G + + Sbjct: 325 -SEMATRTCNQALQIHGGYGYMREYEVERMLRD--AKLLEIGEGTSEI 369 >gi|308493545|ref|XP_003108962.1| CRE-ACDH-2 protein [Caenorhabditis remanei] gi|308247519|gb|EFO91471.1| CRE-ACDH-2 protein [Caenorhabditis remanei] Length = 425 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 38/273 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG---- 254 L+E G+D A+ + K + + ++G KW +S +P++D F++LA E G Sbjct: 149 FALSETVSGSDAFAMKTTATK-DNNDFLINGSKWGISNAPIADFFLVLANAEPEKGYRGI 207 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 CFL+ R E G+ + +G R+ T ++ F+N ++G+ + Sbjct: 208 TCFLIDRDQE-----GVVVGEQDDNLGMRAGTTAQVHFNNVRVPKSSIVGEYGKGCLYLR 262 Query: 311 DMKILIY---------LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356 + I ++ L+++ + + V LA+ I Y R R G LID ++ Sbjct: 263 IILIFVFIGYKYAIDILNASRILIGAQMVGLAQGCFDQTIPYLRERKQFGSRLIDFQGLQ 322 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-PITKYWCCKMAPAVIAEA 415 IA + +I AA + + A R ++ + + A + KY+ ++A Sbjct: 323 HQIAKVGTEIEAARLMVYNSA--------RMKDCGFPFVKAASMAKYYAPEVACKTTKMC 374 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +E +GG G+ +E S + YR++ I G+ N Sbjct: 375 IEWLGGRGFTKEFSAEKFYRDAVVGGIYEGTSN 407 >gi|291220761|ref|XP_002730394.1| PREDICTED: short-chain acyl-CoA dehydrogenase-like [Saccoglossus kowalevskii] Length = 417 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 37/285 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ ++ + + L+G K W + ++A ++ A + + Sbjct: 154 FGLSEPGNGSDAGAASTTA-RLENDQWVLNGTKAWITNGFEAEAAVVFATTDKSLKHKGI 212 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+ P+ +E GL + ++K+G R+++T L + + LLG+ P Sbjct: 213 SAFITPKPME-----GLSLGKKEDKLGIRASSTTYLIYEDAKIPKDHLLGE------PGF 261 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI ++ LD + ++ + +A+ A+ YA +R G + ++ +AD+ Sbjct: 262 GFKIAMMTLDDGRIGIASQALGIAQASLECAVEYALKRESFGRPIAKLQAIQMKLADMET 321 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L+++ A D K ++E+A A++ A +C +A++ +GG GY Sbjct: 322 RLESARLLTWKAAMLKDAGKPYTKESAMAKLAASEAATFCAH-------QAIQVLGGMGY 374 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLF 469 + E RHYR++ I G+ L + L K F+QL Sbjct: 375 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGQLIK---QFQQLI 416 >gi|241766354|ref|ZP_04764239.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241363501|gb|EER58959.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 396 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 21/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 132 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPEMGARGV 190 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E G P Q+L +K+G R + T EL F+N +LG LN+ K+ Sbjct: 191 TAFLIEKGMPGFSIAQKL-DKLGMRGSHTGELVFNNVEVPAANVLGGLNMGA------KV 243 Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 LMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQA 303 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + ++ +A + D + + R WC + A + E ++ GG+GYI E Sbjct: 304 GRSFAYTVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQVFGGNGYINEY 361 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 PLGRLWRDAKLYEIGAGT 379 >gi|304310681|ref|YP_003810279.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301796414|emb|CBL44622.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 379 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 23/260 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCF 256 + + +TE G+D+ AI ++ + Y L+G K F+S+ +SD I+ A+ V Sbjct: 125 LAIAMTEPSTGSDLQAIKTRLED-KGSHYILNGAKTFISNGILSDLVIVAAKAPEGVTLV 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +V R + DG G R K+G +S T EL F N + NV P + L+ Sbjct: 184 VVERGM-DGFKRG----RRLEKMGLKSQDTAELFFENV---TIPKANVLGAPGQGFVYLM 235 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L AI +V+ + + +E + Y + R G + + +A++ ++ Sbjct: 236 QKLAQERLVCAIGAVATAQFAFSETLKYVKERTAFGKPIGTFQNTRFGLAEMRTEVTIGQ 295 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + + SEEA A K+WC M V+ + ++ GG GY+ E I Sbjct: 296 NFVDTLVMKLNAGQISSEEACMA-------KWWCTDMVNRVVDKGVQFHGGYGYMLEYPI 348 Query: 431 ARHYRESPANSILLGSGNAM 450 AR Y ++ I G+ M Sbjct: 349 ARAYVDARIQPIFAGTNEIM 368 >gi|226364603|ref|YP_002782385.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226243092|dbj|BAH53440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 388 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 12/255 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ AI++ D + L+G K F+S+ M +D I+ A+ + G V Sbjct: 131 IAMTEPGAGSDLGAISTTAVVDGDDL-VLNGTKIFISNGMLADFVIVAAKTDPAAGKKGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L+ + +G K+G + T EL F + G +LG+ N G + Sbjct: 190 SLLVVEAGMDGFTRNGPLPKVGLSAQDTAELVFDDVRVPRGNVLGEPNAGFGYLRHNLPQ 249 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ S++ MR + +A+ Y R G + D + +A++A +I A + R Sbjct: 250 ERLSVAVTSMASMRRTFDQALTYICDRTAFGRRVADFQANRFYLAELATEIEIAQCFTDR 309 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 D A +E + A + K+W ++ V+ A++ GG GY+ E +A+ Y Sbjct: 310 CI--LDAAHGTLDE-----VTAAMAKWWITELQQRVVQRAVQLHGGYGYMREYDVAQDYL 362 Query: 436 ESPANSILLGSGNAM 450 + I G+ M Sbjct: 363 DCRGGPIYAGTTEIM 377 >gi|187779164|ref|ZP_02995637.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC 15579] gi|187772789|gb|EDU36591.1| hypothetical protein CLOSPO_02759 [Clostridium sporogenes ATCC 15579] Length = 377 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ K GLTE G+D A Q + +G Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGA--GQTTAVLEGDHYILNGRKTFITNAPICDFAIVTA 168 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 169 MTEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGK 225 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + KI L LD + V+ + +A EA+ Y + R G L + IAD Sbjct: 226 EGKGFKIALNTLDVGRIGVAAQALGIAQGALDEAVKYVKERVQFGRPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 METKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 339 YGFMKDYPIERMYRDARITSIYEGT 363 >gi|71064718|ref|YP_263445.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71037703|gb|AAZ18011.1| probable acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 606 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 37/291 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ + S+ DG Y LSG K F+SS D I+LA++ EG Sbjct: 165 LTEPQCGTDLGQVKSKAIPQDDGSYKLSGTKIFISSGEHDLTENIIHIVLARLPDAPEGT 224 Query: 253 VGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L + G NG+ +++K+G S+AT L F + G+L+G+ N Sbjct: 225 RGISLFIVPKFLPNAEGNIGERNGVSCGSIEHKMGINSSATCVLNFDDAVGYLIGEPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352 + + + I ++ +S A+ YA+ R V+ I+ Sbjct: 285 LKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLSGTKEPEKVADAIIHHA 344 Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 V + + A + + S R A+ + ++ + + PI K + Sbjct: 345 DVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEKWDDKLGFYTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ + GG GYI+E + R++ ++ G+ LD+L Sbjct: 405 TELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTGIQALDLL 455 >gi|328705939|ref|XP_001952480.2| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Acyrthosiphon pisum] Length = 412 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 46/266 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D +A++++ K Y ++G K W + S ++ A + + C Sbjct: 154 LSEPGLGSDASAVSTKATKKGSN-YIINGTKSWTTNGFESKGLVLFASTDKSKKHKGISC 212 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308 FL+ + G + ++K+G R ++T L F N G L N + Sbjct: 213 FLLKKTFP-----GFFVGKKEDKLGIRGSSTCGLVFEDCPVPEENVLGELGKGFNYA--- 264 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 +I LD+ + V+ +A+A + YA +R+ G + +++ IAD+A Sbjct: 265 ------MITLDAGRIGVAAQACGIAQASLELAVDYASKRNSFGVPIAKLQLIQNKIADMA 318 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---G 420 L + +A L++R A+ D S S+EAA A++ A + A A +CI G Sbjct: 319 LRVESARLLTWRAAHLKDSNASHSKEAAMAKLAA----------SEAATYNAHQCIQVLG 368 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ + R+YR++ I G+ Sbjct: 369 GMGYVSDMPAERYYRDARITEIYEGT 394 >gi|154253338|ref|YP_001414162.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157288|gb|ABS64505.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 379 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 43/384 (11%) Query: 93 RWDKVEFHPAWHALLRRSIHDGL--HCSIWDR-SFEPVVR-KQAHKIRAARLYL------ 142 R+D E A+ + R D L H + WDR +F PV ++A + A +Y+ Sbjct: 2 RFDLTEEQQAFQDVARNFATDELAPHAADWDRDAFFPVATMRKAAALGFAGIYVREDVGG 61 Query: 143 --MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIG 199 + +L+A + + A + W F E P + + Sbjct: 62 SALTRLDAALIFEALSEGCTSTAAFMSIHNMASWMIDRFGNEEQRQKWLPRLTPMDLIAS 121 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D AA+ ++ + D Y L+G K F+S + SD ++ + + G G V Sbjct: 122 YCLTEPSSGSDAAALKTKAVRDGDH-YVLNGSKAFISGAGTSDLYVCMVRT-GEAGAKGV 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306 ++ + G+ + + K+G S T ++ F + GF + + + Sbjct: 180 SCIVVEKDTPGVSFGAPERKMGWNSQPTAQVIFEDARVPVANRIGEEGEGFKIAMMGLDG 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G L+ S+ R +L A Y R G L ++ +AD+A ++ Sbjct: 240 G---------RLNIGACSLGTARAALKRAKDYLGEREQFGKKLAQFQALQFKLADMATEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + + A D +A A + A + K + + VI EA++ GG GY++ Sbjct: 291 EAARLMIMQAATKVDA------KAPDATMHAAMAKRFATDVGFNVINEALQIHGGYGYLK 344 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + + RH R++ + IL G+ M Sbjct: 345 DFPLERHLRDARVHQILEGTNEIM 368 >gi|194205574|ref|XP_001491178.2| PREDICTED: similar to Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SBCAD) (2-methyl branched chain acyl-CoA dehydrogenase) (2-MEBCAD) (2-methylbutyryl-coenzyme A dehydrogenase) (2-methylbutyryl-CoA dehydrogenase) [Equus caballus] Length = 494 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ K D + ++G K W + + F+++A V+ G C Sbjct: 238 LSEAGAGSDSFSLKTRADKKGD-YFVINGSKMWISHAEYAGLFLVMANVDPTRGYKGITC 296 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E GL + +NK+G R++ T L F N + + NV K Sbjct: 297 FLVDRGTE-----GLHIGKPENKLGLRASCTCPLTFDNV---KVPEANVLGQIGHGYKYA 348 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G L D ++ +A +A + AA Sbjct: 349 IGMLNKGRVGIAAQMLGLAQGCFDYTIPYIKERVQFGTRLFDFQGLQHQVAHVATQLEAA 408 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ ++ +GG+GY++ Sbjct: 409 RLLTYNAARLAEAGRPFIKEASMA-------KYYASEIAGRTTSKCIDWMGGAGYVKAYP 461 Query: 430 IARHYRESPANSILLGSGN 448 + +++R++ +I G+ N Sbjct: 462 VEKYFRDAKIGTIYEGTSN 480 >gi|153938986|ref|YP_001391489.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str. Langeland] gi|152934882|gb|ABS40380.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str. Langeland] gi|295319513|gb|ADF99890.1| acyl-CoA dehydrogenase family protein [Clostridium botulinum F str. 230613] Length = 377 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A + D Y L+G K F++ +P+ D I+ A Sbjct: 111 PLAKGEYIGSFGLTEPGAGSDAGAGETTAVLEGD-YYILNGRKTFITNAPICDFAIVTAM 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 E G + + + +G +NK+G R T +L F N + N+ Sbjct: 170 TEKGKGSRGISAFIVESKWDGFSTGAHENKMGIRGTETADLIFENV---KVPKENLIGKE 226 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI L LD + V+ + +A EAI Y + R G L + IAD+ Sbjct: 227 GKGFKIALNTLDVGRIGVAAQALGIAQGALDEAIKYVKERVQFGRPLAKFQNTQFTIADM 286 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 287 ETKVQAARWLVYDAAEKKDNGINPGVESAMA-------KYYAAEIANEVAYKALQLHGGY 339 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G++++ I R YR++ SI G+ Sbjct: 340 GFMKDYPIERMYRDARITSIYEGT 363 >gi|108763214|ref|YP_628693.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108467094|gb|ABF92279.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 604 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/325 (22%), Positives = 150/325 (46%), Gaps = 49/325 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ +++SD ++ + G K F++ S MS+ I +LA+ EG Sbjct: 167 LTEPDAGSDVGAARTKARRVSDDVWEIEGVKRFITNGDSDMSENIIHMVLARPEGAAPGT 226 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + F+VP+ + EDGS NG+ +L+ K+G + + T E+ F + G LLG++ Sbjct: 227 KGLSLFVVPKYWVNEDGSLGEANGVVCTKLEKKMGLKGSVTCEMTFGDGKPCRGLLLGEV 286 Query: 303 NVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + + M +I + + S++ + A+ +++ R + G L+ Sbjct: 287 HDG---IRQMFYIIEQARMAVGVKSMATLSAGYGRALAFSKDR-LQGADLMQARDKTAPR 342 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAA----YARIMAP 398 P ++R + AL A D + R+ EA ++ P Sbjct: 343 VPIFRHPDVRRMLMAQKAHAEGMRALCLYTAFIQDGVERKGGHRATEAGELDTLNDMLLP 402 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--N 456 + K +C + A ++A +++ GGSGY+++ + ++ R+ +++ G+ + LD+L Sbjct: 403 LVKGYCSEKAYELLALSLQVHGGSGYLQDYPVEQYIRDQKIDTLYEGTTHIQALDLLMRK 462 Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGK 481 + G + L S + + +G+ Sbjct: 463 VARDGGATLQGLLSQIRETAERTGE 487 >gi|325921333|ref|ZP_08183191.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325548191|gb|EGD19187.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 416 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 157 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 216 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 217 TAFMVDADRAGFHRGKTEPKLGIRASATCEIEFADYIAQPDEVLGVEG---EGFKTAMSV 273 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 274 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 333 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 334 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 386 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 387 YFRDAKITEIYEGT 400 >gi|229109774|ref|ZP_04239359.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|228673619|gb|EEL28878.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|242790071|ref|XP_002481490.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus ATCC 10500] gi|218718078|gb|EED17498.1| isovaleryl-CoA dehydrogenase IvdA, putative [Talaromyces stipitatus ATCC 10500] Length = 433 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 31/264 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E + Sbjct: 167 LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 225 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + +P G R +K+G R + T EL F + F LLG+LN +K+L Sbjct: 226 SAFIVEKTPKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 279 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R + +++ +AD+ +AA+ Sbjct: 280 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHIRKQFNTPIAHNQLIQGKLADMYTKLAAS 339 Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ A S DE+ + R+++ A A + A C +A++ +GG+ Sbjct: 340 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 392 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI E + R R++ I G+ Sbjct: 393 GYINEIAAGRLLRDAKLYEIGAGT 416 >gi|16554489|ref|NP_444213.1| Acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|169235992|ref|YP_001689192.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] gi|167727058|emb|CAP13843.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] Length = 381 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/274 (21%), Positives = 123/274 (44%), Gaps = 35/274 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ +G ++E G+D+A++++ +K D + + G+K W + + D F++L + Sbjct: 112 PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGDE-WIIDGNKMWITNGSVGDYFVVLCR 170 Query: 249 VE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGF 297 + GR F +++ + +G +++ K+G R++ T EL N G Sbjct: 171 TDPDASGRYEGF--SQIVVESDRDGFTAEKITGKLGIRASDTAELVLDAVRVPEENLIGT 228 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 G ++++ + D +V+ V +A A+ YA+ R G + D Sbjct: 229 RGGGF---------LQLMQFFDETRTTVAAQGVGIARGATERALAYAQEREQFGQPVADF 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +A++ AA L+ + A S D + +A + K + ++A V Sbjct: 280 QAIQHKLAEMQTKTEAARTLTRKSAWSVDHRDDQ------LTALASMAKSFASRIAVEVA 333 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG+GY+ + + R YR++ + G+ Sbjct: 334 DEAVQIHGGAGYVNDFDVERFYRDAKITQLYEGT 367 >gi|148265337|ref|YP_001232043.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter uraniireducens Rf4] gi|146398837|gb|ABQ27470.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens Rf4] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 24/300 (8%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + V + +V +W + R Y P + + + LTE G+D A I Sbjct: 82 SVRTTVSVQVSLVEQVIFNWGSEAQRRSYLPG----LCRGEILGCFALTEPGVGSDAAGI 137 Query: 215 TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + DG + L+G K W + ++D I+ A+ G + + D G Sbjct: 138 GATATPHGDG-WLLNGTKNWITNGGVADIAIVFARTGPAAGNKGISAFIVDTKSPGFSSL 196 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGD-LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS 331 ++ K+G R+++T L F + FL GD L TG +KI L LD+ V+ V Sbjct: 197 EIRGKLGLRASSTAALTFRDC--FLPGDALLGETGA--GLKIALSALDNGRYGVAAGCVG 252 Query: 332 LAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + + + YARRR G + +++ IA +A+D+AAA L FR + + Sbjct: 253 IIQGCVDACVAYARRRQQFGRSIASFQLVQDMIARMAVDLAAARLLVFRAGELKNRGAAN 312 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 S E + A KY+ + A +A++ G GY + R+ R++ +I G+ Sbjct: 313 SLETSMA-------KYFASEAAVRAATDAIQVHGAYGYSNAHPVERYLRDAKVATIYEGT 365 >gi|88798868|ref|ZP_01114450.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297] gi|88778348|gb|EAR09541.1| probable acyl-CoA dehydrogenase [Reinekea sp. MED297] Length = 588 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/339 (21%), Positives = 142/339 (41%), Gaps = 45/339 (13%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + P++T+ + ++L+T H S + T PM + + + LTE GTD+ Sbjct: 126 LYPALTAGACLSLLT----HG-------SEDLKQTYLPPMYEGRWSGSMCLTEPHCGTDL 174 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260 + ++ DG Y ++G K F++ D ++LA++ + FLVP+ Sbjct: 175 GIMKTKAVPKGDGSYDITGTKIFITGGEHDLNENIIHLVLAKLPDAPAGPKGISLFLVPK 234 Query: 261 LL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 ++ +DGS N + +++K+G +++AT + F G+L+G+ N + M Sbjct: 235 IMVNDDGSLGDRNAVRCGSIEHKMGIKASATCVMNFDGATGYLIGEENRGLAAMFTMMNY 294 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQ---PVM-----------KR 357 L + + VS A YA + R +G + DQ P++ +R Sbjct: 295 ERLSIGLQGIGLGEVSYQSARAYALDRIQSRAPTGAVNPDQAADPIIVHPDVRRMLLTQR 354 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A + AA + +A D+A+ + A ++ P+ K + + Sbjct: 355 AYNEGGRAFAAYVGMWLDVAKGSDDAEQKKTAEAMVALLTPVAKAYFTDRGLDATILGQQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY+ E + + R++ I G+ LD++ Sbjct: 415 VFGGHGYVREWGMEQFVRDARIAQIYEGTNGIQALDLMG 453 >gi|229044080|ref|ZP_04191767.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] gi|228725251|gb|EEL76521.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|27374207|gb|AAO00971.1| CG4703-PA [Drosophila erecta] Length = 238 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 114/233 (48%), Gaps = 27/233 (11%) Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + L+G K W ++ ++A I+ A + + F+VP+ + G + ++K+ Sbjct: 3 FVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPK-----ATKGFSLGKKEDKL 57 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA--- 335 G R ++T +L F + ++ N+ P KI + LD+ + ++G + + +A Sbjct: 58 GIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALE 114 Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + YA++R G + +++ IAD++L + +A L++R A D+ + ++EAA A Sbjct: 115 LAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMA 174 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ A C + ++ +GG GY+ + + RHYR++ I G+ Sbjct: 175 KLAASEAATLCSH-------QCIQILGGMGYVTDMAAERHYRDARITEIYEGT 220 >gi|88796987|ref|ZP_01112577.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea sp. MED297] gi|88779856|gb|EAR11041.1| putative acyl CoA dehydrogenase oxidoreductase protein [Reinekea sp. MED297] Length = 381 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255 LTE G+D AA+ ++ + S G + L+G K F+++ ++D I+ A + G+ G Sbjct: 124 LTEPHAGSDAAALKTRAVRTSTG-WRLNGTKQFITNGAIADLAIVFAVTDPDKGKKGLSA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGP 308 FLVP L G +++K+G R++ T +L F + LLG ++ G Sbjct: 183 FLVPAHLP-----GFEVPVVESKMGQRASDTAQLVFKDIELPEDALLGAEGQGYAIALGN 237 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I M+ + V A YA+ R G L+D + +AD+ I A Sbjct: 238 LEGGRIGIAAQCVGMAQAAFDV----AASYAQERESFGTRLMDHQAVAFRLADMDTQIEA 293 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A D EAA A++ A MA V+++AM+ +GG GY+ + Sbjct: 294 ARQLVWNAARRKDAGLPALREAAMAKLFA-------SDMAEKVVSDAMQTLGGYGYLTDF 346 Query: 429 SIARHYRESPANSILLGSGN 448 I + YR+ I G+ + Sbjct: 347 PIEQIYRDVRVARIYEGTSD 366 >gi|313898664|ref|ZP_07832199.1| rubredoxin [Clostridium sp. HGF2] gi|312956548|gb|EFR38181.1| rubredoxin [Clostridium sp. HGF2] Length = 634 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE G+D AA T + Y L+G K F+++ +D +++ A +G + Sbjct: 123 FGLTEVNAGSD-AAGTETTAVLEGDYYILNGGKIFITNADKADTYVVFASTNPEMGTRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI- 314 + + +G + +K+G RS++T EL F++ LLG L + KI Sbjct: 182 SAFIVEKGWDGFTFGDHYDKMGIRSSSTAELIFNDVKVPKENLLGKLG------QGFKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + +A+ A+ YA+ R G + Q V+ +AD+A + A Sbjct: 236 MATLDGGRIGIAAQALGIAQGAYENALEYAKERVQFGKPIAQQQVISFKLADMATKLRCA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A E K E MA K + +A + +A++ GGSGY++ Sbjct: 296 RMLIYSSA----ELKENHEPYGMESAMA---KQYASDVALEICNDALQIFGGSGYLKGME 348 Query: 430 IARHYRESPANSILLGS 446 + R YR++ +I G+ Sbjct: 349 VERAYRDAKITTIYEGT 365 >gi|187922781|ref|YP_001894423.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187713975|gb|ACD15199.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 396 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + +K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLEEDGKDAIRGFILEKGW-KGLSAPTIHSKVGLRASITGEIVLDEVFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +++ GP L+SA ++ + AE+ + R++V G Sbjct: 233 PEENRFPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E IARH Sbjct: 340 LDIARLARDMLGGNGISDEFGIARH 364 >gi|111222047|ref|YP_712841.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a] gi|111149579|emb|CAJ61272.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a] Length = 380 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 44/310 (14%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 AS + MTT + W P + E + + ++E G+D+A + + Sbjct: 96 ASYLVDMTTDEQKERWLPGFVNGE-------------LITAIAMSEPGAGSDLAGVKTSA 142 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQR 274 ++ D Y ++G K F+S+ + SD + + + + GR G L+ +E G G R Sbjct: 143 RRAGDH-YVVNGSKTFISNGLLSDLVVTVVKTDPAAGRKGISLLA--IERGM-EGFERGR 198 Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSV 325 +KIG +S T EL F+ L+G+ N +S P E + I AI +V Sbjct: 199 NLDKIGQKSADTAELVFNEVKVPVENLIGEENRGFYHLMSNLPAERLGI------AINAV 252 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 S R ++ YA R G + V + AIA++++ + R + + + Sbjct: 253 SQARRAVELTKQYASDRSAFGQPIGTFQVNRHAIAEMSVKVDVMQTYVDRCIEAVNAGEL 312 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + EAA A KYW + ++ ++ GG GY+ E IAR +R+S L G Sbjct: 313 TAAEAAGA-------KYWATETQWEILDRCLQLHGGYGYMNEYEIARLWRDSRVQR-LYG 364 Query: 446 SGNAMVLDVL 455 N ++ D++ Sbjct: 365 GTNEIMKDLI 374 >gi|319943206|ref|ZP_08017489.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599] gi|319743748|gb|EFV96152.1| glutaryl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599] Length = 395 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 116 FGTEEQKQKYLPKLATGELIGCFGLTEPNHGSDPGSMVTRARKVEGG-YSLSGAKTWITN 174 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG++ F +LE G GL + K+G R++ T E+ F Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 ++ GP L+SA ++ + AEA + A R++ ++ Sbjct: 230 VPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEACYEAARQYTLDRKQFNR 283 Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 P ++++ +AD+A +I+ R+ DE + E + I K C Sbjct: 284 PLAANQLIQKKLADMATEISLGLQAVLRVGRMKDEGIAPVE-------VTSIVKRNSCGK 336 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 337 ALDIARMARDMLGGNGISDEYPVARH 362 >gi|253582720|ref|ZP_04859940.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium varium ATCC 27725] gi|251835296|gb|EES63837.1| acyl-CoA dehydrogenase domain-containing protein [Fusobacterium varium ATCC 27725] Length = 375 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 39/272 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ K G TE + GT + A+ + G+ Y ++G K +++ + ++ F++ A+ Sbjct: 113 PLAKGEKIGAFGWTEAQAGTRVTAVLN-GEN-----YVINGKKVLITNALEAEIFVVFAK 166 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 E + F++ + E G ++K+G R ++T EL F + +LG Sbjct: 167 TDMEKAENNISAFIIEKGTE-----GFSIGEPEDKMGVRGSSTCELIFEDCIVPKNNMLG 221 Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPV 354 + E KI + L+ + V+ + LA EAI Y + R V+G + Sbjct: 222 KVG------EGFKIAMSTLNGGRIGVAAQAIGLAQGALDEAIKYIKEREVNGKKVSQFQN 275 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + IAD+ I AA L ++ A+ K R EE Y +A ++K+ ++A + Sbjct: 276 TQFLIADLQTRIDAARLLVYKAAD----MKDRGEEYGY---LASMSKFLASEIAMKTTEK 328 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG+GY+++ + R R++ I G+ Sbjct: 329 AVQLFGGNGYLKKYPVERMMRDAKVTEIYEGT 360 >gi|212544852|ref|XP_002152580.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|212544854|ref|XP_002152581.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210065549|gb|EEA19643.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210065550|gb|EEA19644.1| glutaryl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 342 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ + ++ G Y LSG K W +SP+SD ++ A++E G++ Sbjct: 78 FGLTEPNHGSDPGSMETVAREHPTKKGFYSLSGSKTWITNSPISDVLLVWAKLESTGKIK 137 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FL+ R P L +KNK R++ T ++ N +L D +GP Sbjct: 138 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPVENMLPDAEGLSGP--- 192 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G+ +L ++I AR R+ G L ++++ +AD + D Sbjct: 193 ---FTCLNSARLGIAFGVTGALEDSISRAREYALDRKQFRGNPLAKYQLIQKKLADASTD 249 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A D KS E M + K C A A E GG+ Sbjct: 250 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 302 Query: 426 EERSIARH 433 +E I RH Sbjct: 303 DEYHIGRH 310 >gi|166711615|ref|ZP_02242822.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 597 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 58/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G +++ T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348 P + ++ I +++A +SV + L+E A+ Y R R S + Sbjct: 282 ---PHKGLQAIFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338 Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 +I P ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIMHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESEQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 459 ASQAAGLKLFLTDVETFANAQDGSAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|119192250|ref|XP_001246731.1| glutaryl-CoA dehydrogenase [Coccidioides immitis RS] Length = 429 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y L+G K W +SP+SD F++ A++E G++ Sbjct: 165 FGLTEPNHGSDPGSMETVARSHPTKKGYYSLTGAKTWITNSPISDLFLVWAKLESTGKIK 224 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R + P L +KNK R++ T ++ N +L D+ GP Sbjct: 225 GFIVQR--DQCPPGTLETPAIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP--- 279 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 280 ---FTCLNSARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKKLADAATD 336 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A DE K E M + K C A E GG+ Sbjct: 337 AAYGTLAAVQVARLKDEGKCTPE-------MISMIKRQNCDRALVGARTLQEVFGGNAAS 389 Query: 426 EERSIARH 433 +E I RH Sbjct: 390 DEYHIGRH 397 >gi|90420133|ref|ZP_01228041.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90335467|gb|EAS49217.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 598 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/327 (21%), Positives = 144/327 (44%), Gaps = 52/327 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D++A+ ++ ++ DG Y + G K +++ +D + L A Sbjct: 160 MNLTEPQAGSDLSALKTKAERADDGSYRIFGQKIYITYGEHDFTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNAT---------VELEFS 292 V+G + FLVP+ L +DGS + C+ +++K+G + T V+ E + Sbjct: 220 GVKG-ISLFLVPKFLVNQDGSLGRRNDAFCHS-VEHKLGIHGSPTCTMIYGDGSVDGEEA 277 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-------- 344 G+L+G+ N + M L + + + +A+ YAR R Sbjct: 278 GAVGYLIGEENRGLACMFTMMNNARLLVGVQGIGVAEAAFQKALDYARERRQGRATRLAK 337 Query: 345 ---SGGIL---IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------- 391 +GG + +D P + R + + A A+++ ++ D AK+ +A Sbjct: 338 NPEAGGQMSPILDHPDVARMLLTMKSLTGAVRAITYACGHATDMAKAHRGDAEASAAWKE 397 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A ++ PI K + + V + ++ GG G++EE AR R++ I G+ Sbjct: 398 RANLLTPIAKAFSTDVGVEVASLGIQVHGGMGFVEETGAARLLRDARIAPIYEGTNGIQA 457 Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDL 476 +D++ + + G + F+ L++ + Sbjct: 458 IDLVARKIGQSGGEAVRRYFAELDETI 484 >gi|320538366|ref|ZP_08038242.1| rubredoxin [Treponema phagedenis F0421] gi|320144781|gb|EFW36521.1| rubredoxin [Treponema phagedenis F0421] Length = 643 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE+ G+D A T + Y L+G K F++ +P++D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLQGDHYILNGGKIFITNAPVADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWQGFEFGDHYDKLGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A EA+ A+ R G + + +AD+ Sbjct: 229 GQGFKIAMATLDGGRIGIAAQALGIAQGAYEEALEQAKEREQFGNPIGVHQGISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A + +S S E+A A++ + + V+ +A++ GGS Sbjct: 289 ATKLRAARFLIYSAAELKENHESYSMESAMAKM-------YASDICLEVVNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G+++ + R YR++ +I G+ Sbjct: 342 GFLKGMQVERAYRDAKITTIYEGT 365 >gi|313122484|ref|YP_004038371.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312296828|gb|ADQ69424.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 379 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 42/265 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GR----VGC 255 ++E G+D+A+I ++ ++ D Y L+G K W + ++D +++A+ G + Sbjct: 124 ISEPAHGSDVASIETRAEEDGDE-YVLNGTKMWITNGTIADVAVVMAKTTPGERHRGITA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312 FLVP L +G ++ NK+G R++ E+ +L D+ V P E++ Sbjct: 183 FLVPTDL-----DGFETTKISNKLGIRASDLAEV--------VLDDVRV---PAENVIGA 226 Query: 313 ------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 +++ + SV+ V + +A YA R G + + + +A+ Sbjct: 227 VDQGFYQLMTFFAGGRTSVAAQAVGVGQAAVDAATDYANEREQGGQKIHEYQAVSHKLAE 286 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I AA +L++R A ++ ++ A A + K + + A V E ++ GG Sbjct: 287 MATNIEAARSLTYRAATHVEDGDDQT-----AAKFASMAKLFASEQAVDVADEGIQVHGG 341 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +G++ + R YR++ I G+ Sbjct: 342 AGFVTDHPAERFYRDARITKIYEGT 366 >gi|148652993|ref|YP_001280086.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572077|gb|ABQ94136.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 383 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 37/295 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T K W PK+ + EY +G + +TE G+D+ AI + K D Sbjct: 107 TQEQKKAWIPKLATGEY--------------VGAIAMTEPTTGSDLQAIKTYAVKEGDD- 151 Query: 226 YCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 Y ++G K F+++ I+LA + +G G L+ ++E G R K G Sbjct: 152 YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLI--VVETDGLEGFERGRNLKKTGL 209 Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEA 335 + T EL FSN LLG + G ++ M+ L + I+++SG ++++L Sbjct: 210 SAQDTSELFFSNVRVPQNNLLGSIE-GLGFIQMMQELPQ-ERLIIALSGCGAIKLALELT 267 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y ++R G + + +A++ D A AL + E K + +A+ Sbjct: 268 LDYVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVEAMIEGKLTAPQAS---- 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + KYW + VI E ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 324 ---LIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADARVQKIYGGTNEIM 375 >gi|30020420|ref|NP_832051.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579] gi|228939490|ref|ZP_04102078.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972343|ref|ZP_04132954.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978956|ref|ZP_04139321.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|229127729|ref|ZP_04256718.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|29895971|gb|AAP09252.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579] gi|228655806|gb|EEL11655.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|228780738|gb|EEM28951.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228787360|gb|EEM35328.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820190|gb|EEM66227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940036|gb|AEA15932.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar chinensis CT-43] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|260437184|ref|ZP_05791000.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876] gi|292810497|gb|EFF69702.1| butyryl-CoA dehydrogenase [Butyrivibrio crossotus DSM 2876] Length = 384 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 27/261 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVE------G 251 GLTE GTD + Q + + DG + L+G K F+++ +D +I++A + G Sbjct: 123 FGLTEPGAGTDAQGV--QTKAVLDGDEWVLNGSKCFITNGKYADVYIIIAVTDVVEDKKG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R ++E G+P G + + K+G R +AT EL F + + N+ + Sbjct: 181 RKKKLFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDC---RIPKENLLGQQGKG 236 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 I ++ LD + ++ + +AE I Y + R G + Q + +AD+A Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALETTIDYVKERKQFGRSIAQQQNTQFVLADLATK 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L ++ A + K S EAA A++ A ++A V + ++ GG GYI Sbjct: 297 VEAAQLLVYKAACTKMTQKVYSVEAAKAKLFA-------AEVAMEVTTKCVQLHGGYGYI 349 Query: 426 EERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 350 REYDVERMMRDAKITEIYEGT 370 >gi|226954433|ref|ZP_03824897.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226834782|gb|EEH67165.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 595 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/411 (20%), Positives = 173/411 (42%), Gaps = 57/411 (13%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 L+ P ++ + +AL + + + + PKI+S E+ T + LTE G Sbjct: 127 LLYPLLSVGAGMALNSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAG 173 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFL 257 TD+ I ++ ++ DG Y ++G K F++ +D ++LA+ + F+ Sbjct: 174 TDLGIIKTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFI 233 Query: 258 VPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L +DGS N + +++K+G +++AT + F G+L+G N + M Sbjct: 234 VPKYLVNDDGSLGERNPVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVM 293 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIA 360 L I + + A YA + R +G ++P ++R + Sbjct: 294 MNYERLSMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLL 353 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAE 414 ++ + A+ A + + D K ++ A + ++ PI K + A + Sbjct: 354 NVRANNEASRAFAVYVGQQLDITKFSTDPEAVKKANDRVALLTPIAKAYLTDTAFQATLD 413 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTL 472 A GG GYI E + + R+ I G+ D++ +++ G + + + Sbjct: 414 AQMVFGGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKVIKNGGAFIAEYITEI 473 Query: 473 EQDLGSSGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 +D ++ + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 474 -RDFANTLDADLNFIKDATLDAATEIEAVTQFIIEQAAENVEFPNSAAVDY 523 >gi|228958605|ref|ZP_04120323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801026|gb|EEM47925.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|229087834|ref|ZP_04219948.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] gi|228695470|gb|EEL48341.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] Length = 379 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYIVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDAPGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A ++ A+ L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATNVEASRLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|218235650|ref|YP_002367035.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|218163607|gb|ACK63599.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|239501461|ref|ZP_04660771.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] Length = 378 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L AN D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 AHQLVLHAANLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVNDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|120555756|ref|YP_960107.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325605|gb|ABM19920.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 600 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE G+ +A I + +DG Y + G K ++S ++LA+++G Sbjct: 162 MALTEPHAGSSLADIRTSATPTADGHYLIKGAKIYISGGEQSITENIVHMVLAKIKGAPA 221 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F+VP+ E+G+P NG+ L +K+G R + L F + G+L+G Sbjct: 222 GVKGISLFIVPKFHVDENGNPGDRNGVSLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVG 281 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349 + L + + +I + +A++ G SL A + R S + Sbjct: 282 EPHQGLKYMFQMMNEARIGVGFGAAVIGYRGYMHSLEYAKDRLQGRKASEKNPESPQVPI 341 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYW 403 ID ++R + AL A D+ + R E ++ P+ K W Sbjct: 342 IDHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAW 401 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P A++ GG+GY E + + +R++ N I G+ LD+L Sbjct: 402 PSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453 >gi|296502892|ref|YP_003664592.1| acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171] gi|296323944|gb|ADH06872.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478 + R YR++ + I G+ L V +L K EQL T +E D+ + Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|229190414|ref|ZP_04317414.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228593027|gb|EEK50846.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] Length = 569 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478 + R YR++ + I G+ L V +L K EQL T +E D+ + Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|218289139|ref|ZP_03493375.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240722|gb|EED07901.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 593 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 47/275 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + DG Y L+G K F+++ +D F++ A+V+G+ F+V Sbjct: 148 LTEPSSGSDALGAKTTAKLSEDGKYYILNGTKQFITNAGFADVFVVYAKVDGQHFSAFIV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R + G+ + + K+G + ++T ++ +L D+ V PVE++ + Sbjct: 208 ERTMP-----GVSFGPEEQKMGIKGSSTRQV--------ILEDVKV---PVENLLFEVGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I ++ G +++L + YA R G L + P+++R +A + Sbjct: 252 GHQIAFNILNIGRFKLGAGALGGSKIALETSAKYANERKQFGKKLSEFPLIQRKLARMNT 311 Query: 365 DIAAATALSFRLANSFDE-------------AKSRSEEAAYARIMAPITKYWCCKMAPAV 411 I A ++ +R A D +S A YA I I K + ++ V Sbjct: 312 QIYALESVVYRTAGLLDAILETVDVTKPDAGVQSAKAIAEYA-IECSINKVFGSEVLDFV 370 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + EA++ GG G+I+E + + YR+S N I G+ Sbjct: 371 VDEAVQIHGGYGFIKEYGVEQMYRDSRINRIFEGT 405 >gi|309779692|ref|ZP_07674451.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|308921633|gb|EFP67271.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 385 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 29/273 (10%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 D+ P+I S E + I LTE G+D A++ ++ D Y ++G K Sbjct: 108 DYLPRIASGE-------------LIISFALTEPNAGSDAASLQTRATPDGDH-YVINGTK 153 Query: 233 WFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 +++ +P + AF ++A+ G G + L+ G+ + K+G R T ++ Sbjct: 154 RYITNAPRAGAFTLMARTGGE-GAGGISALIVPADTPGITLGKPDKKMGQRGTKTCDVML 212 Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343 N ++G + G MK+L D + +S + +A +A+ YA+ R Sbjct: 213 DNVRVPAANIIGGV-AGQGFKTAMKVL---DRGRLHISALACGMAHRLITDAVAYAKERK 268 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G + D +++ +AD ++ A ++ A +D AK ++ ++A K + Sbjct: 269 QFGQPIADFQLIQAMLADSQTELYAGMSMVRDCARRYD-AKPVGKQDHEVSMLASCAKMF 327 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 C +M V A++ GG+GYI E R YR+ Sbjct: 328 CTEMVGRVADRAVQIHGGAGYIAEYKAERFYRD 360 >gi|113868775|ref|YP_727264.1| glutaryl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113527551|emb|CAJ93896.1| Glutaryl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 397 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYELTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A+++G G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLQGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351 + + N+ G L+SA ++ + AE A Y R G L Sbjct: 233 --VPEENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAA 290 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 TQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365 >gi|167032850|ref|YP_001668081.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166859338|gb|ABY97745.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 375 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKARARLDGDH-YVLTGSKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G+ G F+VP SP G R+++K+G ++ T ++ F N ++ L Sbjct: 170 TDPDAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVVNRLG 224 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357 E KI L L+ + ++ V +A A YA R G LI+ + Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A IA A + A D + A + A + K + +MA V ++A++ Sbjct: 282 RLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+ + + R YR+ I G+ + Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|332875584|ref|ZP_08443396.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] gi|332736157|gb|EGJ67172.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] Length = 375 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERMTFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|187918900|ref|YP_001887931.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187717338|gb|ACD18561.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 381 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 16/251 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GTD++ I + + DG + LSG K W ++P++D +LA+ + G + Sbjct: 122 ITEADAGTDVSGIRTTAMRTPDG-WELSGAKLWIHNAPVADVAFVLARTDPAAGRRGMSI 180 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + D + G+ ++K+G R++ EL F L D + ++ LD Sbjct: 181 FIVDCALAGVSKGAKEHKMGQRASQVGELHFDRV--KLPQDALLGQEGRGFHIMMSVLDK 238 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++ + V +A+ A+ YA+ R G + + ++ +AD+A DI AA L Sbjct: 239 GRVGIAALAVGIAQAGLEAALDYAQTRKQFGSHIAEFQGIQWMLADMATDIQAARLL--- 295 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A R E A I + K + A A A++ GGSGYI + R YR Sbjct: 296 ----VHDAAERLEAGERASIACSMAKCFAGDTAVKHSANAVQIFGGSGYIRGYEVERLYR 351 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 352 DAKITQIYEGT 362 >gi|307596317|ref|YP_003902634.1| acyl-CoA dehydrogenase domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551518|gb|ADN51583.1| acyl-CoA dehydrogenase domain protein [Vulcanisaeta distributa DSM 14429] Length = 401 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 36/293 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + TE GTDI +++ ++ D + L G K F++ +P + ++LAQ Sbjct: 120 PVYRGETTFFGAYTEPEHGTDITQLSTVAERKGDK-FILRGVKTFITNAPTAKYGVVLAQ 178 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------------- 294 + + G+ ++L K+G R++ E+ N Sbjct: 179 TDPEKKHRGQTLFIIHTDWPGVQIRKLSGKMGQRASPVGEITLDNVEVPIDYVVGGEKGI 238 Query: 295 ---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 F + L NVS L A +++ M + +A+ YA++R G +I+ Sbjct: 239 NQGFYWTLAYFNVSR-----------LGPAAIALGIMLAAFDKALEYAQKRAQFGQPIIN 287 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT---KYWCCKMA 408 +++ +A +A+ I + ++ +R A D S + R MA IT K + A Sbjct: 288 FQLIQEKLARMAMLIEVSRSMLYRAAYYVD---SYIKFQIDPRAMAAITSAAKVFITDAA 344 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 VI EA++ GG GY EE + R++R+ I G+ +L + + L +G Sbjct: 345 NQVIDEAIQIHGGYGYFEEFDVERYWRDHRVTRIYEGTNEINLLTITDALRRG 397 >gi|315506020|ref|YP_004084907.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315412639|gb|ADU10756.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E +GG+D AA+T++ + D Y ++G K W + ++D + + + G G + Sbjct: 126 LSEPQGGSDAAALTTRAVRDGDA-YVVTGTKAWITHARVADFYNIFCRTGG-PGPKGISC 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 LL D S G+ Q + +G ++ ++ F + + + G I + LD Sbjct: 184 LLADRSTAGIHPQAAERTMGLHASPIAQIAFDDA---RVPAERLIGGEGAGFTIAMSALD 240 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 S + ++ V LA+ A+ YAR R G +ID + +AD A I+AA AL+ Sbjct: 241 SGRLGIAACAVGLAQGALDYAVGYARERRQFGRAIIDFQGLGFNLADAATQISAARALTL 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D ++ S EAA A++ A +A V +A++ +GG+GY+ + + R+ Sbjct: 301 AAARLRDAGRAYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYM 353 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 RE+ I+ G+ L + L KG Sbjct: 354 REAKVLQIVEGTNQIQRLVISRALAKG 380 >gi|269962592|ref|ZP_06176939.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832705|gb|EEZ86817.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 384 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA V + PK+ + E+ LG LTE G+D A++T+ Sbjct: 96 MVASFANEEVKDAFCPKLITGEF----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K + Y L+G K F+S +D +++A+ G G V + +G+ Y R + Sbjct: 140 ATKQGEN-YILNGGKTFISGAGDTDVLVVMART-GDAGAKGVSAFVVPADADGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G V MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPVSHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|229150554|ref|ZP_04278769.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] gi|228632863|gb|EEK89477.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] Length = 569 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST-LEQDLGS 478 + R YR++ + I G+ L V +L K EQL T +E D+ + Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|169826132|ref|YP_001696290.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus C3-41] gi|168990620|gb|ACA38160.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus sphaericus C3-41] Length = 594 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 156/363 (42%), Gaps = 59/363 (16%) Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 S+T + V + + P V K + PK+ S E + LTE Sbjct: 109 SITHGAHVGIGSLPIVLFGDENQKKKYLPKLASGE-------------LIAAYALTEPGS 155 Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264 G+D + A T+ + Y L+G K W ++ +D F++ A+++G + F+V R Sbjct: 156 GSDALGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFSAFIVERTF-- 213 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319 NG+ + K+G +S++T L + LLG+ + G V IL Sbjct: 214 ---NGVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHVIAFNILNIGRYK 268 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + ++ G + + A+ Y +R L D + K ++ +A + A+ +L++R Sbjct: 269 LGVGTIGGSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASHLYASESLNYRTVGL 328 Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 F++ S+ EE +++A I K + + + EA++ GG G++ E Sbjct: 329 FEDRLSQLSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388 Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475 + R YR+S N I G+ N M++ L LL+ NL ++L + +D Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPED 448 Query: 476 LGS 478 +G+ Sbjct: 449 IGT 451 >gi|319761394|ref|YP_004125331.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317115955|gb|ADU98443.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 598 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL+ T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALLAHGTDAQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+ + ++ + +DG Y ++G+K F+S+ D ++LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPQADGTYRITGNKIFISAGEHDVAANIVHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G+ N + L++K+G NAT ++ G ++G+ N + M Sbjct: 235 PKFHVNADGSLGARNPIYCTGLEHKMGIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG---------GILIDQPVMK---- 356 L S+ V+ A+ YA+ R +SG I++ V K Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLT 354 Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A A+ A + L A+ + K R ++ PI K + Sbjct: 355 AKAYAEGARALQIYCTLLLDKAHHHPDEKERKGCDELVALLTPIVKAFITDNGHIATNAC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M+ GG G+I+E + + R++ N I G+ LD+L Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLL 454 >gi|240167759|ref|ZP_04746418.1| acyl-CoA dehydrogenase, FadE9 [Mycobacterium kansasii ATCC 12478] Length = 386 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 54/312 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ + + V LTE G+D +A+ ++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRLATMD-------------VIASYCLTEPDAGSDASALGTRA 139 Query: 219 -QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 Q SD Y L G K F+S + SD ++++A+ + ++E G+ GL + L+ Sbjct: 140 VQHGSD--YVLDGVKQFISGAGASDVYVVMARTGADGPRGISAFVIEKGTA-GLSFGALE 196 Query: 277 NKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIYLD 319 K+G + T ++ FG + LN L+ Sbjct: 197 EKMGWHAQPTAQVILDGVRVPADAMLGGADGEGAGFGIAMNGLNGGR-----------LN 245 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A S+ G + + +A Y R RH G L+D+P ++ +AD+A + + L +R A++ Sbjct: 246 IAACSLGGAQAAFDKAGVYVRERHAFGASLLDEPTVRFTLADMATGLETSRMLLWRAASA 305 Query: 380 FD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D +A + E A A+ T C ++A +A++ GG GY+ E + + R+ Sbjct: 306 LDCDAADKVELCAMAKRYVTDT---CFEVAD----KALQLHGGYGYLREYGLEKIVRDLR 358 Query: 439 ANSILLGSGNAM 450 + IL G+ M Sbjct: 359 VHRILEGTNEIM 370 >gi|228908102|ref|ZP_04071950.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|228851520|gb|EEM96326.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] Length = 569 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPVENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|205375297|ref|ZP_03228087.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus coahuilensis m4-4] gi|205375428|ref|ZP_03228217.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus coahuilensis m4-4] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 35/287 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + + D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAQGEKIGAYGLTEPGSGSDAGGMRTTARLEGDH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 + G F+V E G + + K+G RS+ T E+ F +L Sbjct: 172 TDSEKKQRGGTTAFIVESGFE-----GFSVGKKEKKLGIRSSPTTEIIFEECKVPKENML 226 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353 G+L E KI ++ LD ++ V +A E+I YA+ R G + Q Sbjct: 227 GNLG------EGFKIAMMTLDGGRNGIAAQAVGIAQGALDESIRYAKEREQFGKPIASQQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + IAD+A I A+ L+++ A E +E+A +++MA T A V Sbjct: 281 GISFKIADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLMAGDT-------AMNVTT 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +A++ GG GY ++ + R R++ I G+ L + +L K Sbjct: 334 DAVQIFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 380 >gi|197122597|ref|YP_002134548.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196172446|gb|ACG73419.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 40/280 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253 LTE G+D A + + + D Y L G K F+++ P +DA ++ A + + Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181 Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 FLVP R G P+ +K+G R++ + L F + LG+ Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCALPARYRLGEEG---- 229 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++G + +A A YA+ R G + ++ +AD Sbjct: 230 --DGFKIAMGTLDGGRIGIAGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I AA L R A++ D S E+A A++ A +M+ V ++A++ GG Sbjct: 288 MATEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 GY++E + RH+R+S I G+ L + + KG Sbjct: 341 YGYVKEFDVERHWRDSRITEIYEGTSEIQRLVISASVLKG 380 >gi|90417198|ref|ZP_01225125.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [marine gamma proteobacterium HTCC2207] gi|90330974|gb|EAS46235.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [marine gamma proteobacterium HTCC2207] Length = 599 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 60/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E + G+ +A I ++ + DG Y L+G K ++S D ++LA++ G Sbjct: 163 LSEPQAGSSLADIRTKAEPKPDGSYALTGTKMWISGGEQDITENIVHMVLAKIPGSPPGV 222 Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + FLVP R+ +DG+ N + L +K+G R L F + G+L+G+ Sbjct: 223 KGISLFLVPKNRVNDDGTIGEYNNIALAGLNHKMGCRGATNCLLNFGESGESIGYLVGEP 282 Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV---- 354 N + M +I + + + + ++ G SL YAR R ++ P Sbjct: 283 NQGLANMFHMMNEARISVGMSAVMSALGGYLYSL----DYARNRPQGRPLVNRNPEDPQI 338 Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITK 401 +KR + I A L + A D K ++ A ++ PI K Sbjct: 339 MISEHADIKRMLMTQKAFIEGAQTLMYYCAELIDTKKLSTDLEANQRRDLLLDLLTPICK 398 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 W + A++ +GG GY E + R YR++ N I G+ +D+L + Sbjct: 399 SWPSEFCLEANKLAIQILGGYGYTREYPVERLYRDNRLNHIHEGTWGIQGIDILGRKVRM 458 Query: 462 TN------LFEQLFSTLEQDLGSSG--------KKVITILRDSISLCK--EDKGLA 501 N L E++ +T++ G +G + + ++ D+IS+ + ED LA Sbjct: 459 QNGAAVKILREEMQATIDSAAGHAGLSSFCDQLNEYLVLIEDTISVVEQAEDPSLA 514 >gi|327440911|dbj|BAK17276.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 378 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 46/272 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254 GLTE G+D A T + +G + ++G K F+++ + L + R G Sbjct: 123 FGLTEPNAGSD-AGGTETTAVLDNGEFVINGSKVFITNASYAKHLALTAITNRDGNKKEI 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312 +VP G + K+G L SNT ++ ++ V P E++ Sbjct: 182 SAIIVPT-----DAKGFTIKSEYEKMG--------LNASNTTELIIENVRV---PEENLL 225 Query: 313 --------KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + L LD + ++ M V +A+ A+ YA+ R G L D + + Sbjct: 226 GIRGNGFKQFLTTLDGGRIGIAAMAVGIAQGALNKAVQYAKERKQFGKALADFQATQFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ + I A ++ A D+ + +EAA I KY+ +MA V EA++ Sbjct: 286 ADMEVKIQLARTFVYKAAWLKDQGRPFGKEAA-------IAKYYASEMAMEVCDEAIQIH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG GY++E + R R+ A + +G G + V Sbjct: 339 GGYGYMKEYEVERFLRD--AKLLEIGEGTSEV 368 >gi|70732972|ref|YP_262745.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68347271|gb|AAY94877.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 601 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L + G N + L++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFLPNADGSVGQRNAVSCGSLEHKMGIHGNATCVMNFDAATGFLIGPANKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + L +A+ ++ + + YAR R + +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + A+ + A D + + + + A M PI K + ++ Sbjct: 345 DVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEV 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + ++ R+S + + G+ LD+L Sbjct: 405 GFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLG 453 >gi|73539142|ref|YP_299509.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72122479|gb|AAZ64665.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----R 252 I LTE G+D A++ ++ + D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPNAGSDAASLQTKAELDGDH-YVINGTKRFITNAPRAGAFTLMARTGGPGASG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N ++G + G Sbjct: 179 ISSFIVP-----ADTPGISLGKPDKKMGQRGTKTCDVVLENARVPAANIIGGVP-GVGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A+ YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAVAYAKERKQFGKPIGDFQLIQGMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A TK +C +M + A++ GG+GY Sbjct: 290 ELYAGLSMMRDCAQRYD-AKPAGKSDPEVSMLASCTKMFCTEMVGRIADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E R YR+ Sbjct: 349 IAEYKAERFYRD 360 >gi|330823264|ref|YP_004386567.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329308636|gb|AEB83051.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 598 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 49/340 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL+ T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALLAHGTDAQKKTYLPKLVSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGRVGC--FLV 258 D+ + ++ + +DG Y ++G+K F+S+ D ++LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPQADGTYRITGNKIFISAGEHDVAANIVHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G+ N + L++K+G NAT ++ G ++G+ N + M Sbjct: 235 PKFHVNADGSLGARNPIYCTGLEHKMGIHGNATAQIAIDGAVGTMVGEPNKGLAAMFVMM 294 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSG---------GILIDQPVMK---- 356 L S+ V+ A+ YA+ R +SG I++ V K Sbjct: 295 NAARLGVGNQSLGLTEVAFQNALAYAKDRLQMRSLSGVKAKDKEADPIIVHPDVRKMLLT 354 Query: 357 -RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A A+ A + L A+ + K R ++ PI K + Sbjct: 355 AKAYAEGARALQIYCTLLLDKAHHHPDEKERKGCDELVALLTPIVKAFITDNGHIATNAC 414 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 M+ GG G+I+E + + R++ N I G+ LD+L Sbjct: 415 MQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLL 454 >gi|195998421|ref|XP_002109079.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens] gi|190589855|gb|EDV29877.1| hypothetical protein TRIADDRAFT_20131 [Trichoplax adhaerens] Length = 420 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 32/261 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A + Q + + DG Y ++G K W ++ +D ++++A G Sbjct: 163 LSEPDSGSD--AFSLQTRAVPDGDDYVINGRKLWITNAEKADLYLIMANAAPEQGYKGIT 220 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELE-----FSNTFGFLLGDLNVSTG 307 CF+V + G+P GL R + K+G SN V L+ SN G + G + Sbjct: 221 CFIV----DAGTP-GLSVPRNEQKMGLNIVSNCPVMLDDVRVPASNIIGNVGGGYKIMAN 275 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + D +I I A + G + L AI Y R G L D M+ IA +++ Sbjct: 276 ALTDGRIGI----AAQVIGGAQGVLDIAIPYVMERKQFGKRLFDFQAMQHQIAQATVEVT 331 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L + A D+ +EA+ A KY+ ++A V + ++ +G GY++E Sbjct: 332 AARLLYYNAAKLLDQKLPSVKEASMA-------KYFATEVACQVCIQGIKWLGALGYMKE 384 Query: 428 RSIARHYRESPANSILLGSGN 448 + + R+ A +I G+ N Sbjct: 385 MPVEKFLRDLVAATIYEGTSN 405 >gi|85709790|ref|ZP_01040855.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1] gi|85688500|gb|EAQ28504.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. NAP1] Length = 593 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/358 (23%), Positives = 157/358 (43%), Gaps = 67/358 (18%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQVE 250 + LTE G+D+ A+ S + I++G Y ++G K +++ +++ I +LA++ Sbjct: 175 MNLTEPAAGSDVGALRSTAEPITEGEHAGKYRIAGQKIYITWGDHQLAENIIHLVLARLP 234 Query: 251 GR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 G + F+VP+ + +DGS N L L++K+G ++ T + + + G Sbjct: 235 GAPEGSRGISLFVVPKYHVNDDGSLGPHNDLRPVSLEHKLGIHASPTCVMSYGDNGECIG 294 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348 L+G N M + +++A ++V V + E AI YA R S Sbjct: 295 ELVGQENRGL-----MAMFTMMNNARINVGNQGVQIGERATQQAIAYATDRVQSARAGSP 349 Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARI 395 +I+ P ++R I + A AL + A D +AK+RSE I Sbjct: 350 DKNPVAIIEHPDVRRMILRMKALTEGARALLYYCAGQVDRGTIGNADAKNRSE------I 403 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K W + V ++ GG G++EE A+H+R++ I G+ D++ Sbjct: 404 LVPLLKAWGTDIGVEVAGIGVQVHGGMGFVEETGAAQHWRDARIAPIYEGTNGIQAADLV 463 Query: 456 NL---LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510 LE G + LF + +D G +L K+ +AR++ ++ +L Sbjct: 464 TRKLGLEGGEAMI-ALFEEIARDAGDEAGLA--------ALAKDCADIARWMQDEASL 512 >gi|109896984|ref|YP_660239.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109699265|gb|ABG39185.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 586 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 51/328 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + + + PK+ S E+ T + LTE GTD+AA+ ++ +D Y Sbjct: 146 SEHLQQSYLPKMLSGEWPGT-------------MNLTEPDAGTDLAAVKTKAVP-NDDHY 191 Query: 227 CLSGHKWFLS---SPMSDAFIML---------AQVEGRVGCFLVPR--LLEDGSP----N 268 ++G K +++ M+D + L A V+G + F+VP+ L E+G+P + Sbjct: 192 LITGQKIYITWGDHQMTDNIVHLVLARLPDAPAGVKG-ISLFIVPKFNLDENGAPAERND 250 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 C L++K+G + T + F + G +L+G+ + + M + + Sbjct: 251 AYCV-SLEHKMGIHGSPTCVMSFGDNGGAKGYLVGEAHKGLSYMFTMMNHARQGVGLQGL 309 Query: 326 SGMRVSLAEAIHYARRR------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + S A+ YA+ R S ++ P ++R + + A AL A Sbjct: 310 AISEASYQHALGYAKERLQGTNKDGSRFTIMKFPDVRRMLMQMKSSTEAMRALCLVAAAE 369 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D A + + PI K WC +++ + + GG G+IEE A+ YR++ Sbjct: 370 IDRGN-----GARSELFTPIVKGWCTELSQELTYLGTQIHGGMGFIEETGSAQFYRDARI 424 Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464 +I G+ LD++ L+ KG L Sbjct: 425 LTIYEGTTGVQALDLVGRKTLVNKGEAL 452 >gi|330829884|ref|YP_004392836.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565] gi|328805020|gb|AEB50219.1| Isovaleryl-CoA dehydrogenase 2 [Aeromonas veronii B565] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 125/256 (48%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ D + L+G+K W + P +D F++ A+ + G + Sbjct: 121 LAMSEPGAGSDVVSMRLTAEREGDH-FVLNGNKMWITNGPDADTFVIYAKTDTSAGPKGI 179 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVE 310 ++E G+P Q+L +K+G R ++T EL F N G L G + V ++ Sbjct: 180 SAFIVEAGTPGFSTAQKL-DKLGMRGSSTCELVFDNCRVPQENLLGTLHGGVKVLMSGLD 238 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ A + M+ + + Y R R G + + +++ +AD+ +A++ Sbjct: 239 YERVVL----AAGPLGIMQACMDVVLPYVRERKQFGQAIGEFQLVQGKLADMYTRLASSR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL + +A++ D+ + ++ A A + A + A + +A++ +GG+GYI E Sbjct: 295 ALVYSVASACDQGHTSRKDCAAAILFA-------AENATQMALDAIQLLGGNGYINEYPT 347 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 348 GRLLRDAKLYEIGAGT 363 >gi|313110252|ref|ZP_07796148.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310882650|gb|EFQ41244.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 596 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLI 449 >gi|84687629|ref|ZP_01015504.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Maritimibacter alkaliphilus HTCC2654] gi|84664419|gb|EAQ10908.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Rhodobacterales bacterium HTCC2654] Length = 369 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 35/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254 L+E G+D++AI + ++ DG + L+G+K ++S+ + ++A R + Sbjct: 113 LSEPHCGSDVSAIRTSAERKGDG-WVLNGYKTYVSNGIKAGQAVVAAYTDRSKGAKDGIS 171 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP G + +G+ + EL F + +L E+ K Sbjct: 172 LFLVP-----ADAPGYKLAGILELMGHHTPGVAELAFDDV------ELPADALIGEEGKG 220 Query: 315 LIYL----DSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 L YL ++ ++++G ++L EA YAR R GG L D ++ +AD+A + Sbjct: 221 LSYLMHGLNAGRLAIAGTSLGMGEMALEEARLYARERPAFGGKLSDFQAVQHMLADMATE 280 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L A +D + +R + + K +C + A + A++ GG+GY+ Sbjct: 281 MRAARLLMLDAAWRYDRGE-------VSRSLCAMAKLFCSEAAGRTVDTALQIFGGAGYV 333 Query: 426 EERSIARHYRESPANSILLGS 446 + + R YR+ I G+ Sbjct: 334 RGQRVERLYRDVRVTRIYEGA 354 >gi|229083243|ref|ZP_04215617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] gi|228700049|gb|EEL52661.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] Length = 569 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQL T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQLEDTEVESDVAN 427 >gi|300778163|ref|ZP_07088021.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] gi|300503673|gb|EFK34813.1| butyryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] Length = 430 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 20/254 (7%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLV 258 GLTE G+D +++ + D + ++G K F++ +S ++ G G Sbjct: 175 GLTEHNTGSDSGGMSTTAVRDGDE-WIINGAKNFITHAISGDIAVVMTRTGEKGAKNNST 233 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G P G + +NK+G R++ T EL F N LG+ V G + MK+L Sbjct: 234 AFVLEKGMP-GFTSGKKENKLGMRASETAELIFDNVRVPDSHRLGE--VGEGFKQAMKVL 290 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A +S+ R + A+ YA+ RH G + D + +AD+A +I AA L Sbjct: 291 DGGRISIAALSLGTARGAYKAALKYAKERHQFGKPIADFQAINFMLADMATEIDAAELLI 350 Query: 374 FRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R A++ AK + ++E A A++ A C +++ A++ GG GY ++ + Sbjct: 351 QR-ASTLKNAKQKMTKEGAMAKLYASEA---CVRISN----NAVQIFGGYGYTKDFPAEK 402 Query: 433 HYRESPANSILLGS 446 YR+S +I G+ Sbjct: 403 FYRDSKLCTIGEGT 416 >gi|166711522|ref|ZP_02242729.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 382 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ +L V E + + Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + ++ EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|54024145|ref|YP_118387.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54015653|dbj|BAD57023.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 382 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 37/295 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W P++ S E V L +TE G+D+ AI ++ + D Y Sbjct: 106 TEEQKRTWLPRLCSGE-------------VVGALAMTEPGTGSDLQAIRTRAVREGDD-Y 151 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 ++G K F+++ +D I++A+ +G G L+ L+E P G R +KIG Sbjct: 152 VINGAKTFITNGGQADLVIVVAKTGAIADGAAGTSLI--LMETDRP-GFRRGRRLDKIGQ 208 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAI 336 R T EL F + G LLG+ + G V+ M+ L I+ SV M +LA+ I Sbjct: 209 RGQDTSELFFDDVRVPVGNLLGE-SEGQGFVQLMQQLPQERLIILVGSVVAMETALAQTI 267 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARI 395 Y++ R G L K +A++A + R+A F D+ ++ Sbjct: 268 SYSKERQAFGKPLFAFQNTKFTLAEVATET--------RIARVFLDDCITKHIRGELDVP 319 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W + + E ++ GG GY+ E I+R + + I G+ M Sbjct: 320 TVAMAKWWITERTMVALDECLQLHGGYGYMTEYPISRAWVDHRVQKIYAGTNEIM 374 >gi|89092373|ref|ZP_01165327.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] gi|89083461|gb|EAR62679.1| putative acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 18/272 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + ++ D Y L+G K F+S S D +++A+ G G + Sbjct: 124 LTEPNAGSDAASLKTTARREGDN-YILNGSKIFISGAGSTDVLVVMART-GEDGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316 D G+ Y R ++K+G S T + F + LLG N G MK L Sbjct: 182 FAVDAKAEGIVYGRKEDKMGWNSQPTRMITFEDVVVPASALLG--NEGDGFKIAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A S+ + +L A Y R G L + ++ +AD+A ++ AA + Sbjct: 240 GRINIATCSIGTAQAALNRARDYMHERKQFGKELANFQALQFKLADMATELVAARQMVRM 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D + ++ AY + K + + V EA++ GG+GYI+E + R+ R Sbjct: 300 AAAKLD--ANHPDKTAYC----AMAKRFATDVGFNVADEALQIFGGNGYIKEYPMERYIR 353 Query: 436 ESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 ++ + IL G+ M + V L+E +L Sbjct: 354 DNRVHRILEGTNEIMRVIVARRVLMEDAADLL 385 >gi|328881353|emb|CCA54592.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 47/304 (15%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + ++W P++ S E A+G GLTE G+D + ++ Sbjct: 95 AKTVAAWGSEEQKREWLPRLASGE--------------ALGCFGLTEPGTGSDAGNLATR 140 Query: 218 G-QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRL 275 + G Y ++G K F+++ +D ++ A+ G V L GL + + Sbjct: 141 AVRDGGSGDYVINGSKMFITNGTWADVVLLFARTNDTPGHRGVSAFLVPADTPGLTRRAV 200 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAI----MSVSG 327 K+G R AT EL +L D+ V GP + K SA+ MSV+ Sbjct: 201 HGKLGLRGQATAEL--------VLEDVRVPAAALLGP--EGKGFTVAMSALAKGRMSVAA 250 Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ D Sbjct: 251 GCVGIAQAALDAAVRYAGEREQFGKPIASYQLVQELISDIAVDVDAARLLTWRVADLIDR 310 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + + A+ A K + + A A++ GG GYI+E + + R++ ++ Sbjct: 311 GQDFATAASKA-------KLYASEAAVRAANNALQVFGGYGYIDEYPVGKLLRDARVMTL 363 Query: 443 LLGS 446 G+ Sbjct: 364 YEGT 367 >gi|328881069|emb|CCA54308.1| Butyryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 392 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255 L+E G+D AA+ ++ + DG + + G K W ++D ++A+ G V Sbjct: 133 LSEPHAGSDAAALRTRAVRDGDGGDWVIDGTKAWITHGGIADFCTVMARTGGAGARGVTA 192 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G GL + K+G + + T +L F G + D + I Sbjct: 193 FLVP-----GDAPGLSAAPPERKMGMKGSPTAQLHFD---GVRVPDERRLGAEGQGFAIA 244 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDS + ++ V L EA+ YA+ R G + D ++ +AD+A + A Sbjct: 245 LDALDSGRLGIAACAVGLGQAALDEAVGYAKERRQFGRPIADFQGLRFLLADMATQVEAG 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL A DE + AA A K +C A + +A++ +GG GY + Sbjct: 305 RALYLEAARLRDEGRPFGRCAAMA-------KLFCTDAAMRITTDAVQVLGGYGYTADFP 357 Query: 430 IARHYRESPANSILLGS 446 + R+ RE+ I+ G+ Sbjct: 358 VERYLREAKMLQIVEGT 374 >gi|91793296|ref|YP_562947.1| butyryl-CoA dehydrogenase [Shewanella denitrificans OS217] gi|91715298|gb|ABE55224.1| Butyryl-CoA dehydrogenase [Shewanella denitrificans OS217] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 29/298 (9%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+ TP + K W+ + + + + LTE G+D A++ Q + Sbjct: 96 MITTWGTPALRKTWSEGLTTGQ-------------LLASYCLTEPGAGSDAASL--QTKA 140 Query: 221 ISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + DG Y L+G K F+S + +++ G G + + +G+ Y + ++K+ Sbjct: 141 VRDGEHYVLNGSKVFISGAGATEMLVVMCRTGEAGAKGISAIAVPADLDGIIYGKAEDKM 200 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAE 334 G + T ++ F N LLG+ G MK L ++ A SV + +L Sbjct: 201 GWNAQPTRQITFDNVRVPVDHLLGE--EGQGFTFAMKGLDGGRINIATCSVGTAQAALER 258 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 A Y R G L ++ +AD+A ++ AA + RLA +F E AY Sbjct: 259 ATQYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLDNQDPEATAYC- 315 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + K + + +V A++ GG GYI E + RH+R+ + IL G+ M L Sbjct: 316 ---AMAKRFATDIGFSVCDSALQIHGGYGYIREYPLERHFRDVRVHQILEGTNEIMRL 370 >gi|290961905|ref|YP_003493087.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] gi|260651431|emb|CBG74553.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] Length = 399 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257 L+E G+D A++ ++ + D W ++D + ++A+ G + FL Sbjct: 142 LSEPASGSDAASLRTKAVREGDEWVITGTKSWITHGGVADFYTVMARTGGEGSRGITAFL 201 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T +L F G +GD + I L Sbjct: 202 VP-----GDAEGLSAAAPEKKMGMKGSPTAQLNFD---GVRVGDARRLGEEGQGFAIALS 253 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ V +A EA+ YA R G + D ++ +AD+A A A Sbjct: 254 ALDSGRLGIAACAVGVAQAALDEAVAYATGRQQFGRPISDFQGLRFMLADMATQTEAGRA 313 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S++AA A+++ C A V +A++ +GG GY + Sbjct: 314 LYLSAARLRDAGRPFSKQAAMAKLL-------CTDAAMRVTTDAVQILGGYGYTADFPAE 366 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 367 RYMREAKVLQIVEGT 381 >gi|258651208|ref|YP_003200364.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258554433|gb|ACV77375.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM 44233] Length = 390 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 46/265 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + ++ D Y L+G K W +D ++++A+ + R G FL Sbjct: 127 LSEAQAGSDPAALRTTARRDGD-EYVLNGAKAWTTHGGHADFYLVMARTSDERTGISSFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIG--NRSNATVELEFSNTFGFLLGDLNVSTGPVE----- 310 VP GL + K+G + ATV LE + PVE Sbjct: 186 VP-----ADTAGLIADPPERKMGLTGSATATVRLEQARV-------------PVERRIGA 227 Query: 311 ---DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 ++I L LDS + ++ + LA+ A+ YAR R G +ID + +AD Sbjct: 228 EGEGLRIALAALDSGRLGIAAVATGLAQGALDRAVAYARERQTFGQAIIDHQGLGFLLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A A+ A D+ S EAA A+++A A V +A++ +GG Sbjct: 288 MEAAVQTARAMYLHAARLRDQGLPFSREAAIAKLVA-------TDNAMKVTTDAVQVLGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 SGY + + R+ RE+ I G+ Sbjct: 341 SGYTRDFPVERYMREAKVMQIFEGT 365 >gi|118465062|ref|YP_883553.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium 104] gi|118166349|gb|ABK67246.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium 104] Length = 386 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 36/367 (9%) Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGH 150 WD E P +LR S G+ +I+ R E V ++ R++ +A Sbjct: 30 WDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIADPTTAA 84 Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +S A M+ TP K W P++ + + V LTE G+D Sbjct: 85 FLSIHNMCAWMIDSYGTPEQRKGWVPRLAAMD-------------VIASYCLTEPGAGSD 131 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 AA++++ + G Y L G K F+S + SD ++++A+ G + ++E GS G Sbjct: 132 AAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEKGSA-G 189 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIM 323 L + + K+G + T ++ L + G I + L+ A Sbjct: 190 LSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRLNIAAC 249 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S+ G + + +A Y R R G L+D+P ++ A+AD+A + + + +R A + D Sbjct: 250 SLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAGALDAD 309 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 E + + K + V +A++ GG GY+ E + + R+ + IL Sbjct: 310 DPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLRVHRIL 363 Query: 444 LGSGNAM 450 G+ M Sbjct: 364 EGTNEIM 370 >gi|108763116|ref|YP_631979.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108466996|gb|ABF92181.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 GLTE G+D AA + + D Y ++G K W + P +DA +++ G Sbjct: 123 FGLTEPEAGSDAAAQKTVAVRKGDE-YVINGSKNWITNGPKADAIVLMTMTNKEAGHKGI 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+VP +P G K+G + + + F + ++LG E Sbjct: 182 TAFMVP----TDTP-GFIRAEPDKKMGISAAWSCSMFFEDMRVPAKYMLGKEG------E 230 Query: 311 DMKILI-YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ R + EA+ Y+ R G + + ++ IAD+A Sbjct: 231 GFKIAMSTLDGGRIGIASQALGIARAAYEEAVRYSGERKSFGKPIREHQAIQFMIADMAT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA L +R A D+ S E+A A++ + +MA V +A++ GG GY Sbjct: 291 EIDAARLLVWRAALQKDKGVRHSAESAMAKL-------YASEMASRVANKALQVHGGMGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 +E + RH R++ I G+ Sbjct: 344 SKEMDVERHVRDARITEIYEGT 365 >gi|294812769|ref|ZP_06771412.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294325368|gb|EFG07011.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 427 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 41/272 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 + +TE G+D+A + + ++ DG Y L+G K F++ + +D I+ A+ E R Sbjct: 166 IAMTEPGTGSDLAGMKTTAKRSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTPEDR 225 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F+V LE G R +K+G R++ T EL F+ D+ VS G + Sbjct: 226 RHGISLFVVDTGLE-----GYAVGRKLDKLGLRTSDTAELSFT--------DVRVSAGDL 272 Query: 310 --EDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 E+ K YL A+ + + ++ Y R R V G + K Sbjct: 273 LGEEHKGFSYLGQNLPQERLAIAVGAYAQASAAIRFTQEYVRDRTVFGQSVASFQNTKFE 332 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A ++ AA A+ R ++ D + + EAA A++ +C ++A VI ++ Sbjct: 333 LASCKAEVDAAEAVVDRALDAHDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQL 385 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 386 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 417 >gi|254776850|ref|ZP_05218366.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium avium subsp. avium ATCC 25291] Length = 386 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 36/372 (9%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQ 145 P WD E P +LR S G+ +I+ R E V ++ R++ +A Sbjct: 25 PHALEWDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIAD 79 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +S A M+ TP K W P++ + + V LTE Sbjct: 80 PTTAAFLSIHNMCAWMIDSYGTPEQRKGWVPRLAAMD-------------VIASYCLTEP 126 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D AA++++ + G Y L G K F+S + SD ++++A+ G + ++E Sbjct: 127 GAGSDAAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEK 185 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318 GS GL + + K+G + T ++ L + G I + L Sbjct: 186 GSA-GLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRL 244 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + A S+ G + + +A Y R R G L+D+P ++ A+AD+A + + + +R A Sbjct: 245 NIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAG 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D E + + K + V +A++ GG GY+ E + + R+ Sbjct: 305 ALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKILRDLR 358 Query: 439 ANSILLGSGNAM 450 + IL G+ M Sbjct: 359 VHRILEGTNEIM 370 >gi|218780925|ref|YP_002432243.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762309|gb|ACL04775.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 531 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 29/283 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG--RVGCFLVP 259 L+E +GG+D+ + + + DG++ L G K+F S+ +D ++ A+ +G +VG F++P Sbjct: 178 LSEIQGGSDVPSNLVEAVE-EDGVWKLYGTKFFCSAAHADYAMVTAKPKGSEKVGLFVMP 236 Query: 260 RLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L N R+K K+G T EL + + +G L+ + + +L Sbjct: 237 SWLPGDKKKERRNSFTIDRIKWKMGTSELPTAELTMNGAVAYQVGPLDRGLANMVGV-VL 295 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 Y L + S M EA Y R G + P++ +AD+ A + Sbjct: 296 TYSRLTVGLSGASSMIRVWREASKYCEFREAFGVNINFFPMVMGQLADMEKTAKRTLAGA 355 Query: 374 FRLANSFDE------AKSRSEEAAYAR---------IMAPITKYWCCKMAPAVIAEAMEC 418 FRL + S+ E+ A + ++ I W C P V+ AM Sbjct: 356 FRLYKEVLDLPGGFLGASKDEDDAMKKKRFMVRELVMLQKICTSWDC---PDVVRAAMSM 412 Query: 419 IGGSGYIEERS-IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG G +E+ S + R YR++ N + G N ++ + L+K Sbjct: 413 FGGHGVMEDFSALPRLYRDAAVNELWEGPRNVLLTQMHRDLQK 455 >gi|120402372|ref|YP_952201.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119955190|gb|ABM12195.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 387 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 154/371 (41%), Gaps = 44/371 (11%) Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQLEAGH 150 WD+ PA +LR + G+ +I+ R + V +I A R++ A Sbjct: 32 WDETHHFPA--DVLREAAELGM-AAIYCR--DDVGGSGLRRIDAVRIFEKLATADPTVAA 86 Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +S A MV T K+W P++ S + LTE G+D Sbjct: 87 FLSIHNMCAWMVDSFGTEEQRKEWVPRLASMD-------------AIASYCLTEPGAGSD 133 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDG 265 +A+ ++ + D Y L G K F+S + SD ++++A+ +G G F+VP+ Sbjct: 134 ASALRTKAVRSGDD-YVLDGVKQFISGAGSSDVYVVMARTGSDGPKGISAFVVPK----- 187 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLD 319 GL + + K+G + T ++ F L G TG MK L ++ Sbjct: 188 DTPGLSFGTDEQKMGWNAQPTKQVIFEGARVPADALLGGPDGEGTGFGIAMKGLNGGRIN 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A S+ G + + ++ Y R GG L+D+P ++ +AD+A + + L +R A + Sbjct: 248 IAACSLGGAQTAYDKSAAYLADRQAFGGALLDEPTIRFTLADMATALETSRVLLWRAATA 307 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D E + + K + V +A++ GG GY+ E + + R+ Sbjct: 308 LDNDHPDRVE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRV 361 Query: 440 NSILLGSGNAM 450 + IL GS M Sbjct: 362 HRILEGSNEIM 372 >gi|297171157|gb|ADI22167.1| acyl-CoA dehydrogenases [uncultured gamma proteobacterium HF0200_24F15] Length = 395 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 108/262 (41%), Gaps = 22/262 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 + E+ P T IG GLTE G+D + S + + G Y W ++ Sbjct: 116 YGSEHQRQKFLPRLATGEVIGCFGLTEPDFGSDPGGMKSHARGVEGGFYVSGTKTWITNA 175 Query: 238 PMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 P++D F++ A+ EG + F LLE G P GL R++ K R++ T E+ N F Sbjct: 176 PIADVFVVWAKDEEGVIRGF----LLERGMP-GLVTTRIEGKFSLRASETGEISMDNVF- 229 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILID 351 + D NV G L+ A ++ + AE +A R RH G L Sbjct: 230 --VPDENVFNGVHGLRGPFACLNLARFGIAWGAMGAAECCWHASRNYTLERHQFGRPLAA 287 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL FD A R EA + K C A + Sbjct: 288 NQLVQKKLADMQTEITLGLTGCLRLGRLFD-AGHRLPEA------VSLLKRNNCGKALDI 340 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + G +G +E + RH Sbjct: 341 ARVARDLHGANGISDEYHVIRH 362 >gi|209546212|ref|YP_002278102.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539069|gb|ACI59002.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 395 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 24/263 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 116 FGSEAQKLKYLPKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISN 174 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +P++D F++ A+ E G + F +LE G GL + K+G R++ T E+ F Sbjct: 175 APIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF 229 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + + N+ G L+SA ++ + AE A Y R G L Sbjct: 230 ---VPEENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLA 286 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+A +I+ RL +E E + I K C A Sbjct: 287 ANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALE 339 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E IARH Sbjct: 340 IARAARDMLGGNGISDEFGIARH 362 >gi|115400327|ref|XP_001215752.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191418|gb|EAU33118.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 430 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 38/284 (13%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 144 NGSPDQKARFLPGLLSGDKIGALAMSEHSAGSDVVSMKTNAKAV-DGGYVLNGTKMWITN 202 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + + +G R +K+G R + T EL F N F Sbjct: 203 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFDGFSCARKLDKLGMRGSNTGELIFDNVFV 262 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG++N +K+L+ L+ ++S M+ +L + Y R G Sbjct: 263 PKENILGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 316 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYARIMAPITKY 402 + +++ +AD+ +AA+ A ++ A D + S R+++ A A + A Sbjct: 317 PIAHNQLIQGKLADMYTKLAASRAYTYATARQIDNSASSGVVIRTQDCAGAILYAAERAT 376 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 C +A++ +GG+GYI E R R++ I G+ Sbjct: 377 ECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|325122697|gb|ADY82220.1| putative acyl-CoA dehydrogenase protein (AcdB-like) [Acinetobacter calcoaceticus PHEA-2] Length = 378 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGC 255 LTE G+D +AI + ++ D + L+G K F++S + +L V + + C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALLFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP + G R+++K+G ++ T + F + L +L G E KI Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITFEDCR-IPLENLVGQEG--EGYKIA 233 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + A SV R + A+ YA R G L+ + +AD+A I AA Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFCLADMATQIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDFP 346 Query: 430 IARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 347 VERIYRDVRVSQIYEGASD 365 >gi|167837676|ref|ZP_02464559.1| putative glutaryl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 395 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 19/251 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ QK+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAQKVPGG-YSLSGSKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +++ + +LE G GL + K+G R++ T E+ F + D N+ G Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF---VPDENILPG 239 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADI 362 L+SA ++ + AE+ + R++V G L ++++ +AD+ Sbjct: 240 VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADM 299 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +I RL DE + E + I K C A + A + +GG+ Sbjct: 300 QTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGN 352 Query: 423 GYIEERSIARH 433 G +E +ARH Sbjct: 353 GISDEFGVARH 363 >gi|254429573|ref|ZP_05043280.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196195742|gb|EDX90701.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 380 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 19/260 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + Q + + DG Y ++G K F++S + + +A G G + Sbjct: 125 LAITEPNGGSDVANL--QTRAVRDGDHYVVNGAKTFITSGVRADYYTVAVRTGDKGYGGI 182 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 LL E G+P ++LK K+G ++ T EL F + L+G N + Sbjct: 183 SLLLIEKGTPGFTVGRKLK-KMGWWASDTAELFFEDCRVPVENLIGPENGGFYCIMSNFQ 241 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L A+ + S +++L EA+ Y + R G L V + +A++A D+ A+T ++ Sbjct: 242 MERLILAVTANSTAQLALDEAMKYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTY 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R+A ++ + + A+ +A + A V +A++ GGSGY+ + R + Sbjct: 302 RVAAQIAAGENCVLDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLF 354 Query: 435 RESPANSIL-LGSGNAMVLD 453 R+ N IL +G G +++ Sbjct: 355 RD---NRILSIGGGTHEIMN 371 >gi|121607229|ref|YP_995036.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121551869|gb|ABM56018.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 388 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 25/283 (8%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 DW E T P L +TE G+D + + + + D + G Sbjct: 107 DWGS-----EEQKTRLLPRIADGALAALAITEPDAGSDATGMRTSFRPVGDDVLVNGGKS 161 Query: 233 WFLSSPMSDAFIMLAQVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + + + +++ + EG G + +LE G+P GL RL++K+G R++ T L Sbjct: 162 FITNGDRAGLYLLFGKWEGIAGARQSISVLILEQGTP-GLSVLRLEDKMGMRASGTATLA 220 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG-----MRVSLAEAIHYARRRHV 344 F G + NV P + +KIL L+ + SV+ R + +A+ Y +R Sbjct: 221 FD---GCRVPQANVLGQPGDGLKILFASLNKSRPSVAAHALGIARAAFEDAVAYINQRRQ 277 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYW 403 SG +++ ++ +AD+A ++A + +++A D A+ EA+ ++ A Sbjct: 278 SGQRILEFQGIQFMVADLAAELALVESWLWQVAGWVDAGAQDFGMEASLLKLRA------ 331 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A V +A++ +GG GY ++ + R R++ I G+ Sbjct: 332 -TDLAMRVATDAVQLLGGYGYCKDYRVERLMRDAKITQIWEGT 373 >gi|121713100|ref|XP_001274161.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus NRRL 1] gi|119402314|gb|EAW12735.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus clavatus NRRL 1] Length = 428 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 18/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E G + Sbjct: 162 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGM 220 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F N F LLG+LN + +++L Sbjct: 221 SAFIVEKTTEGFSCARKLDKLGMRGSNTGELVFDNVFVPKENLLGELN------KGVRVL 274 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ +AA+ Sbjct: 275 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGIPIAHNQLIQGKLADMYTKLAAS 334 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ A D + S +E + + A Y + A +A++ +GG+GYI E Sbjct: 335 RAYTYATARHIDNSASLAEVSIRTQDCAGAILY-AAERATECALDAIQLMGGNGYINEIP 393 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 394 AGRLLRDAKLYEIGAGT 410 >gi|226362825|ref|YP_002780603.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226241310|dbj|BAH51658.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 399 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 16/270 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D +A ++ +G Y ++G KWF++ ++D I+LA VE + Sbjct: 121 VAISEANAGSDFSAASTTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPDNAATIF 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L++ +P G+ + + E F N +LG + G D+ Sbjct: 181 --LIDVDTP-GVKIKHIPRYTHTFVYEHPEFTFENVRVGADAVLGGI----GQGHDLTRD 233 Query: 316 IYLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + +M ++ +L A+ +AR R G LI++ +++ IAD +DI A Sbjct: 234 WFTEERLMIGARTIGAAERALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRA 293 Query: 372 LSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ ++A FD+A + A K + + V+ A++ GG GYI + + Sbjct: 294 LTHQVAWEFDQADPNDADLRKTLHAKAATVKLAASEASNRVVDRAVQIFGGRGYIRDYPV 353 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R +RE + I G+ L + N K Sbjct: 354 ERLWRELRVDRIWEGTSEIQRLVIANEANK 383 >gi|158319685|ref|YP_001512192.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139884|gb|ABW18196.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii OhILAs] Length = 379 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 24/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD +A Q + DG Y L+G K F+++ + +I++A Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDASA--QQTTAVLDGDSYILNGSKIFITNAGYAHIYIIMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 + VG + + D G + K+G + +AT EL F N LLG Sbjct: 171 MTDKSVGTRGISAFIVDADTPGFTVGPKEKKLGIKGSATCELIFENCRIPKENLLGKEGK 230 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 G MK LD + ++ + +A E +HY + R G + + + Sbjct: 231 GFGIA--MKT---LDGGRIGIAAQALGIAQGALDETVHYVKERKQFGKPISAFQNTQFQL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + A+ L ++ A++ D S EAA A++ A + A V +A++ Sbjct: 286 ADMAAKVEASRLLVYKAAHNKDMGLPYSYEAAMAKLFA-------SEAAMEVTTKAVQLH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY E + R R++ I G+ Sbjct: 339 GGYGYTREYPVERMMRDAKITEIYEGT 365 >gi|15600380|ref|NP_253874.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|9951491|gb|AAG08572.1|AE004931_9 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] Length = 596 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVCGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|262198234|ref|YP_003269443.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262081581|gb|ACY17550.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 387 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 20/264 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247 P T+ +G +G+TE GTD+ + + ++ DG Y LSGHK F++ +P ++ F++ A Sbjct: 121 PRTLTAEHVGAMGMTEPAVGTDVLGMRTSARRTDDG-YVLSGHKTFITNAPEAEVFVVYA 179 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 Q++ R+ F+V R + +G K+G R++ EL F + L G Sbjct: 180 QLDKRLTTFVVERGM-----SGFSVSDKIPKMGMRASTMAELVFEDVRVPAANLLGKEGG 234 Query: 308 PVEDMKILIYLDS---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +M + ++ A MS+ L + Y+ R G + D ++R I + Sbjct: 235 GITNMMRNLEIERLGLAAMSLGIANRCLDVMVRYSSEREAFGKPISDFGQIQRYIGESYA 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A L + +A + SR+ R+ K + A V A++ +GG GY Sbjct: 295 KVEAIRGLLYGVARTVSHG-SRN------RLGTDAVKLFAATAAKEVADAAVQVLGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGSGN 448 E + + R+ A I +G G Sbjct: 348 CAEYRVEQFLRD--AKLIEIGGGT 369 >gi|114800213|ref|YP_759397.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] gi|114740387|gb|ABI78512.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] Length = 594 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 51/342 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + ALM + + + PK+ S E+ T + LTE GT Sbjct: 126 MYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWAGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y ++G K ++S D ++LA++EG + F+V Sbjct: 173 DLGLMKTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVV 232 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + EDGS N L+ K+G NAT + + G+L+G+ + + M Sbjct: 233 PKYMVKEDGSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG----GI---------LIDQPVMKRAIA 360 L + +S ++ A+ +A+ R V G G+ +I P ++R + Sbjct: 293 NEARLGVGLQGMSQAEIAYQNALDFAKDR-VQGRSLTGVQAPDKPADPIIVHPDVRRMLL 351 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCCKMAPAVIAE 414 + + A A + +A D +EA Y ++ P+ K + Sbjct: 352 EQKAFLEGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYLTHKGYESANL 411 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GGSG+ E + + R+ + I G+ LD++ Sbjct: 412 GLQVHGGSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVG 453 >gi|319791524|ref|YP_004153164.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315593987|gb|ADU35053.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 598 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 100/421 (23%), Positives = 170/421 (40%), Gaps = 69/421 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALKAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258 D+ + ++ + DG Y ++G K F+S+ M+D I +LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPQPDGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + DGS N + L++K+G NAT ++ G L+G+ N Sbjct: 235 PKFKVKADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLA-----A 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQ---PVMKRAIAD 361 + + +++A + V + L E A+ YA+ R +SG D+ P++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVR 349 Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 L A A A R F + K R + ++ PI K + Sbjct: 350 KMLLTAKAYAEGGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHI 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465 M+ GG G+I+E + + R++ N I G+ LD+L G N F Sbjct: 410 ATNSCMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKF 469 Query: 466 EQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARFLTEKIALASSAAALYRA 520 +L + L ++ G + K I +L D ++ + G F A++ L A Sbjct: 470 GKLVARLVEEEGVNEKMAEFINPIAMLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVA 529 Query: 521 G 521 G Sbjct: 530 G 530 >gi|117619749|ref|YP_856608.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561156|gb|ABK38104.1| isovaleryl-CoA dehydrogenase 2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 382 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 128/260 (49%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + D + L+G+K W + P +D F++ A+ + G Sbjct: 123 LAMSEPGAGSDVVSMRLTAVREGDH-FVLNGNKMWITNGPDADTFVIYAKTDPAAG---- 177 Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306 P+ ++E G+P Q+L +K+G R ++T EL F +N G L G + V Sbjct: 178 PKGISAFIVEAGTPGFSTAQKL-DKLGMRGSSTCELVFDNCRVPQANLLGPLHGGVKVLM 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ ++++ A + M+ + + Y R R G + + +++ +AD+ + Sbjct: 237 SGLDYERVVL----AAGPLGIMQACMDVVLPYVRERKQFGQPIGEFQLVQGKLADMYTRL 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A++ AL + +A++ D+A++ ++ A A + A + A + +A++ +GG+GYI Sbjct: 293 ASSRALVYSVASACDQARTSRKDCAAAILFA-------AENATQMALDAIQLLGGNGYIN 345 Query: 427 ERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 346 EYPTGRLLRDAKLYEIGAGT 365 >gi|71652152|ref|XP_814739.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70879737|gb|EAN92888.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 624 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 54/299 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV--- 253 LTE + GTD+A + ++ + +DG Y L+G K F+S+ D I+LA++ V Sbjct: 189 LTEPQCGTDLAQVKTKAEPCADGSYKLNGTKIFISAGDHDMTENIVHIVLARLPDSVPTT 248 Query: 254 ---GCFLVPR--LLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 FLVPR + DGS N C L++K+G + +AT +L F N+ G+L+G Sbjct: 249 KGISLFLVPRHVVKPDGSLETNKNVKCVG-LESKMGIKGSATAQLSFENSVGYLIG---- 303 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQP- 353 P E MK + ++++A + S V AE A+ YAR +R +SG D+P Sbjct: 304 --APNEGMKQMFTFMNTARVGTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPN 361 Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMA 397 + +A+A+ RL + EAK S A Sbjct: 362 DPLVWHPNVRQNILFAKAVAEGGRAFLTDMG---RLLDIQGEAKDASLRDALEHEIGFYT 418 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + + ++ GG GYI+ + + R++ +++ G+ LD + Sbjct: 419 PIAKGCLTEWGLEASSRCLQVWGGHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIG 477 >gi|296392044|ref|ZP_06881519.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 596 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|94498439|ref|ZP_01304996.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58] gi|94422087|gb|EAT07131.1| Acyl-CoA dehydrogenase [Sphingomonas sp. SKA58] Length = 581 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 46/337 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD+A + ++ + DG Y ++G K F+SS D ++LA+ Sbjct: 161 MALTESGAGTDLALLKTRAAPLDDG-YAITGTKIFISSGDHDFGGNIVHLVLARLPDAPA 219 Query: 249 -VEGRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP+ L D S N L L+ K+G + T + + G+L+G+ Sbjct: 220 GVKG-ISLFLVPKFLPDESGGFTARNTLSVGALEKKMGIHAQPTCVMNYDGATGWLVGEP 278 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-------RRRHVSGGI----LID 351 + + M ++ + ++ + G+ ++ A A + R G +ID Sbjct: 279 HRG---LAAMFTMMNTERLMVGIQGLGIAGAAYQQAAAYAKDRLQGRSADGKAGPVAIID 335 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405 ++R + + + A AL+ A D A++ + + AR ++ P+ K Sbjct: 336 HADVRRMLLGVRAFVEAGRALAGWTALQLDRAQAHPDPSERARADARVALLTPVIKAAFT 395 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 + +A + GG GYI E + + R++ I G+ +D++ L G Sbjct: 396 DLGFEGAVQAQQVFGGHGYIREWGMEQFVRDARIAQIYEGTNGVQAMDLVGRKLGMGGGT 455 Query: 464 LFEQLFSTLEQDLGSSGK-----KVITILRDSISLCK 495 + E+ F+ ++ DL S + V+ R +++L + Sbjct: 456 VVEEFFALIDADLDSLAEAAVNHSVVAQTRQALALLR 492 >gi|27366926|ref|NP_762453.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6] gi|27358493|gb|AAO07443.1| Branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus CMCP6] Length = 384 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 45/365 (12%) Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164 + ++WD + F PV V K+A ++ LY M++L+A + S+ S A Sbjct: 27 NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 86 Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 MT +H +W F ++E + ++ LTE G+D A++ + + Sbjct: 87 MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGALLGSYCLTEPNSGSDAASLKTTATRQ 143 Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLK 276 D Y ++G K F+S + + +++A+ G V F+VP G+ Y R + Sbjct: 144 GDE-YRINGAKAFISGAGETQVLVVMARTGGEGAKGVSAFVVP-----ADAQGVSYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329 K+G S T + F N LG+ + ++ +I I A SV + Sbjct: 198 PKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQ 253 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L A Y + R G L + ++ +AD+A+++ AA L A+ D K + Sbjct: 254 QALNLATQYVQERKQFGHTLAEFQTVQFRLADMAIELIAARQLVRFAASKLD--KGDPDA 311 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AY + K + + V EA++ GG GYI+E + R +R+ + IL G+ Sbjct: 312 TAYC----AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEI 367 Query: 450 MVLDV 454 M L V Sbjct: 368 MRLIV 372 >gi|300704832|ref|YP_003746435.1| dehydrogenase [Ralstonia solanacearum CFBP2957] gi|299072496|emb|CBJ43846.1| dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 397 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ + F Sbjct: 174 SPIADVFVVWAKLPDENGDDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353 + + N+ G L+SA ++ + AE+ + R++V +P Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLAA 290 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365 >gi|282864406|ref|ZP_06273462.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE] gi|282560893|gb|EFB66439.1| Butyryl-CoA dehydrogenase [Streptomyces sp. ACTE] Length = 383 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 45/302 (14%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + + W P++ S E A+G GLTE G+D ++ ++ Sbjct: 95 AKTVASWGSEEQKRQWLPRLTSGE--------------ALGCFGLTEPGTGSDAGSLATK 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y ++G K F+++ +D ++ A+ G V L GL + + Sbjct: 141 AVRDGDD-YVINGSKMFITNGTWADVVLLFARTGDTPGHRGVSAFLVPADAPGLTRRTVH 199 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329 K+G R AT EL +L D+ V GP E I + + MSV+ Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPATALMGP-EGKGFSIAMSALAKGRMSVAAGC 250 Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V +A+A + YA R G + +++ I+DI++D+ AA L++R+A+ D + Sbjct: 251 VGIAQAALDAAVRYAGEREQFGKSIASYQLVQELISDISVDVDAARMLTWRVADLVDRGQ 310 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + A+ A++ A + A A++ GG GYI+E + + R++ ++ Sbjct: 311 DFATAASTAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPVGKLVRDARVMTLYE 363 Query: 445 GS 446 G+ Sbjct: 364 GT 365 >gi|325927007|ref|ZP_08188281.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] gi|325542626|gb|EGD14094.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] Length = 393 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 16/266 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y R + K+G S T + F N LLG N G MK L Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENVRIPAENLLG--NEGEGFKMAMKALDG 248 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A S+ + +L A Y R G L D ++ +AD+A + AA + Sbjct: 249 GRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHT 308 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D A + + K + A+ +A++ GG GYI E I R R Sbjct: 309 AARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLLR 362 Query: 436 ESPANSILLGSGNAMVLDVLNLLEKG 461 +S + IL G+ M + V L G Sbjct: 363 DSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|296161567|ref|ZP_06844372.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295888211|gb|EFG68024.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 387 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 53/307 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +V TP + PK + E+ G+GLTE GTD+ AI + Sbjct: 97 AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271 +++ D Y ++G+K W +S + +L + + PR LL P G Sbjct: 144 KRVGDE-YVVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHRGMSLLLVQKGP-GFE 197 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324 R K+G + T EL F+ D +VST G VE +IL L+ ++ Sbjct: 198 VSRQLEKLGYKGIDTCELSFN--------DYHVSTDALIGGVEGRGLQQILGGLELGRIN 249 Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 V+ V +A E++ Y+++R G + + ++ + ++A + A L A Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQK 309 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D + EA A KY+ + A EAM G GY +E ++ R YR++P Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPL 362 Query: 440 NSILLGS 446 +I G+ Sbjct: 363 LTIGEGT 369 >gi|197121603|ref|YP_002133554.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196171452|gb|ACG72425.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 13/266 (4%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA 247 AP + L ++E G+D+AAI + ++ DG ++G K ++++ F+ LA Sbjct: 119 APAVRGERVAALAISEPDAGSDVAAIRTTARR--DGADLVVNGSKMWITNGARADFLTLA 176 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 G G + LL G R K+G S+ T L F LLG+ + Sbjct: 177 VRTGEAGHGGLSLLLFPTDVKGFQVSRTLEKVGLPSSDTAVLFFEECRVPAANLLGEQDQ 236 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 V L +A+ +V+GM++ L +A+ Y R G + + +AD Sbjct: 237 GFYHVMANFQGERLVAAVQAVAGMQLMLEDAMRYGGERSAFGRPVAKFQAWRHRLADHLT 296 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L++R A+ + E + A++ A C++A V + M+ GG GY Sbjct: 297 AVEAARWLTYRAADLLARGEPAVREISMAKLFA-------CELAQRVAYDCMQLHGGMGY 349 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E IAR +R+ A +I G+ M Sbjct: 350 VLESDIARAWRDVRAMTIAGGTSEIM 375 >gi|304321290|ref|YP_003854933.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] gi|303300192|gb|ADM09791.1| acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] Length = 598 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 54/369 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M S+T ++ AL+ T + PK+ + E+ T + L+E G+ Sbjct: 124 MGMSLTQGAVKALLKYGTDEQKALYLPKMATAEWSGT-------------MNLSEPHAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D++ + + + + DG + + G K ++S D ++LA++ EG G FLV Sbjct: 171 DLSQLKCKAEPVGDGTFKIKGTKCWISYGDHDLTENICHLVLARLPDAPEGTKGISMFLV 230 Query: 259 P--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 P R+ EDGS N + ++ K+G + T + F + G L+G N + Sbjct: 231 PKYRVNEDGSLGSRNDVNIVSIEEKLGQHGSPTCVISFGDDDDCLGTLVGKENEGLKNMF 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------HVSGGILI---DQPVMKRAIAD 361 M +D + S S +A+ YA+ R V G + + P ++R + Sbjct: 291 VMMNSARIDVGMQGTSASEASFQKALQYAQERPQGRPYGVRSGPQVPIYEHPDVRRQLMT 350 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEE----AAYAR--IMAPITKYWCCKMAPAVIAEA 415 + A+ AL + A + D A+ ++E AA R ++ P+ K + A V Sbjct: 351 MRALTDASRALGYAAAIAHDIAEKATDEDVRRAAKEREDLLTPLAKAFPTDRAMEVTNHG 410 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQL--FS 470 ++ GG G++EE A+ YR++ I G+ +D++ + +G F+ + S Sbjct: 411 IQIHGGMGFVEETGAAQFYRDARITQIYEGTNGIQAIDLVGRKLGMGEGKLAFDFMDDIS 470 Query: 471 TLEQDLGSS 479 L Q+L S Sbjct: 471 ALSQELADS 479 >gi|116053335|ref|YP_793659.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115588556|gb|ABJ14571.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 596 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLAKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKAADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|317130791|ref|YP_004097073.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cellulosilyticus DSM 2522] gi|315475739|gb|ADU32342.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cellulosilyticus DSM 2522] Length = 379 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 26/271 (9%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRV---GC 255 GLTE G+D A + + ++ DG Y L G K F+++ ++ +++ A + GC Sbjct: 124 GLTESGSGSDAAGMRTTAKR--DGSDYVLDGSKIFITNAGEAEIYVVFALTDPESKHKGC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 ++E G P G + ++K+G RS+ T+E+ F G + N+ E KI Sbjct: 182 SAF--IVEKGMP-GFSMGKKESKLGIRSSPTLEIIFD---GCRVPKENLLGKEGEGFKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ LD ++ V +A+ +I YA+ R G + Q + IA++A + A+ Sbjct: 236 MMTLDGGRNGIAAQAVGIAQGALDASIEYAKERKQFGKPIGAQQAISFKIAEMATKVEAS 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+++ A E S +E+A ++K + A V EA++ GG GY +E Sbjct: 296 RLLTYQAAWRESEGLSYGKESA-------MSKLFAGDSAMEVTTEAVQVFGGYGYTKEYP 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R+ R++ I G+ L + +L K Sbjct: 349 VERYMRDAKITQIYEGTNEIQRLVISKMLLK 379 >gi|217959850|ref|YP_002338406.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|229139044|ref|ZP_04267621.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|217065597|gb|ACJ79847.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|228644399|gb|EEL00654.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] Length = 569 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|315506402|ref|YP_004085289.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315413021|gb|ADU11138.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 606 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 55/304 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E + G+ +A +T++ + DG Y + G K ++S + ++LA++ G Sbjct: 166 LSEPQAGSSLADLTTRAEPQDDGTYRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGV 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295 + F+VP++L D G N + L +K+G R L F + Sbjct: 226 KGLSLFIVPKVLLDDDGNLGPRNDVVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAV 285 Query: 296 GFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349 G+L+G P + + ++ ++ + A + + +L +++ YAR+R + Sbjct: 286 GYLVGQ------PHQGLAVMFHMMNEARIGIGAGATALGYTAYLKSVAYARQRPQGRPVA 339 Query: 350 IDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394 P ++R + + A AL DE K+ EA R Sbjct: 340 DKDPTTPQMPIVAHSDVRRMLLAQKSYVEGALALVLYCGRLLDEQKTAPAEADRERAQLL 399 Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 ++ PITK W + A A++ GG GY + + +H+R++ N+I G+ L Sbjct: 400 LDLLTPITKSWPAQWCLAANDLAIQVHGGYGYTRDYDVEQHWRDNRLNAIHEGTHGIQAL 459 Query: 453 DVLN 456 D+L Sbjct: 460 DLLG 463 >gi|257094072|ref|YP_003167713.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046596|gb|ACV35784.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 558 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 143/333 (42%), Gaps = 51/333 (15%) Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 AG L++ P + S S++ T + K W PK+ E P+ + +TE Sbjct: 244 AGSLITRPEILSRSLLKGGTEAQREK-WLPKVAVGE-------PL------CAIAVTEPD 289 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC--FLV 258 G+D+AA+ + K G + L G K W + + ++LA+ G G FLV Sbjct: 290 TGSDVAAMRLKATKCEGG-WILDGVKTWCTMAGKAGVLLVLARSNPDRSLGHKGLSMFLV 348 Query: 259 PRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + DG G+ R + IG R + E+ F + F + D N+ GP + Sbjct: 349 EKDSYDGHDFEYRQRQGGVLSGRAISTIGYRGMHSYEVFFDHVF---VPDENLVGGPEGE 405 Query: 312 MKILIY---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 K + + +A ++ M+ + A+ Y++ RH G + + + +A + Sbjct: 406 GKGFYFTMAGFAGGRIQTAARAIGVMQAAFERAVSYSQERHAFGKPIGEFQLTLVKLARM 465 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + + ++ + D+ + + E A + K + C+ A + EAM+ GG Sbjct: 466 ATLLTVSRQFTYAVGALMDQGQGQME--------ASMVKLFTCRTAEWLTREAMQIHGGM 517 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GY EE ++R++ ++ SI G+ + L V+ Sbjct: 518 GYAEESPVSRYFLDARVLSIFEGAEETLALKVI 550 >gi|29833461|ref|NP_828095.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] gi|29610584|dbj|BAC74630.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] Length = 390 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257 L+E G+D A++ ++ + D W ++D + ++A+ G + FL Sbjct: 133 LSEPSSGSDAASLRTKAVRDGDDWVITGTKAWITHGGIADFYTVMARTGGEGARGITAFL 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T ++ F G + D + I L Sbjct: 193 VP-----GDAEGLHAALPEKKMGMKGSPTAQVHFD---GVRVSDERRIGDEGQGFAIALS 244 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ V +A EA+ YA R G + D ++ +AD+A I A A Sbjct: 245 ALDSGRLGIAACAVGVAQAALDEAVAYATGRQQFGRPIADFQGLRFMLADMATQIEAGRA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S++AA A+++ C A V +A++ +GG GY + + Sbjct: 305 LYLAAARLRDAGRPFSKQAAMAKLL-------CTDAAMKVTTDAVQVLGGYGYTADFPVE 357 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 358 RYMREAKVLQIVEGT 372 >gi|300697298|ref|YP_003747959.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957] gi|299074022|emb|CBJ53559.1| putative butyryl-CoA dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252 I LTE G+D A++ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N + ++G + G Sbjct: 179 ISAFIVP-----ADTPGITLGKHDKKMGQRGTKTCDVMLDNVRVSAANIIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAAAYAKGRRQFGQPIADFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A +K +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDCARRYD-AKPAGRQDHEVSMLASCSKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E + R YR+ Sbjct: 349 IAEYKVERFYRD 360 >gi|224106760|ref|XP_002314277.1| predicted protein [Populus trichocarpa] gi|222850685|gb|EEE88232.1| predicted protein [Populus trichocarpa] Length = 420 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 35/307 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + + PK+ S E+ +G L ++E G+D+ ++ + ++ DG Sbjct: 143 NPAQRQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 187 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y ++G+K W + P++ ++ A+ G + ++E G P Q+L +K+G R Sbjct: 188 YIINGNKMWCTNGPVAQTLVVYAKTNVTAGSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 246 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ M+ L + Y R Sbjct: 247 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYIR 306 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ IAD+ + ++ + + +A D + ++ A + A Sbjct: 307 QREQFGHPIGEFQFIQGKIADMYTSLQSSRSYVYSVARDCDSGRIDPKDCAGVILCAA-- 364 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + A V +A++C+GG+GY+ E S R R++ I G+G + + ++ Sbjct: 365 -----ERATQVALQAIQCLGGNGYVNEYSTGRLLRDAKLYEI--GAGTSEIRRMI----I 413 Query: 461 GTNLFEQ 467 G LF+Q Sbjct: 414 GRELFKQ 420 >gi|222095939|ref|YP_002529996.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] gi|221239997|gb|ACM12707.1| acyl-CoA dehydrogenase [Bacillus cereus Q1] Length = 569 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 38/315 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFE 466 L V +L K E Sbjct: 403 LTVAKMLMKQVEQIE 417 >gi|167624790|ref|YP_001675084.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354812|gb|ABZ77425.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length = 385 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ Q + + DG Y +SG K F+S + +++ G G + Sbjct: 124 LTEPGAGSDAAAL--QTKAVRDGDEYVISGSKVFISGAGATELLVVMCRTGGAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y + ++K+G + T E+ F N +LLG+ G MK L Sbjct: 182 IAVPADAAGIIYGKAEDKMGWNAQPTREITFENVRVPASYLLGE--EGQGFTFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A S+ + +L A Y R G L ++ +AD+A ++ AA L R Sbjct: 240 GRINIATCSIGTAQAALERATQYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA +F + E AY + K + + V A++ GG GYI E + RH R Sbjct: 299 LA-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERHVR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|145298893|ref|YP_001141734.1| isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851665|gb|ABO89986.1| Isovaleryl-CoA dehydrogenase [Aeromonas salmonicida subsp. salmonicida A449] Length = 382 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/345 (20%), Positives = 150/345 (43%), Gaps = 26/345 (7%) Query: 116 HCSIWDRSFEPVVRKQA-HKIRAARLYLMAQLE-AGHLMSPSVTSASMVALMTTPRVHKD 173 H +++ R P + + H I A Y L H++ S + ++ + H + Sbjct: 33 HSNVFPRDLWPQMGELGLHGITVAEEYDGVSLGYLAHVLVMEQVSRASASVGLSYGAHSN 92 Query: 174 WAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 R P KA P + +G L ++E G+D+ ++ + D + L+ Sbjct: 93 LCINQIHRHGTPDQKARYLPSLVSGEHVGALAMSETGAGSDVVSMRLTAKHDGDH-FVLN 151 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G+K W + P +D F++ A+ + G + + + G + +K+G R ++T E Sbjct: 152 GNKMWITNGPDADTFVIYAKTDTSAGPKGISAFIVEAGTQGFTTAQKLDKLGMRGSSTCE 211 Query: 289 LEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 L F N G L G V ++ ++++ A + M+ + + Y R Sbjct: 212 LVFDNCRVPQENLLGTLHGGARVLMSGLDYERVVL----AAGPLGIMQACMDVVLPYVRE 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +++ +AD+ +A++ AL + +A++ D+ ++ ++ A A + A Sbjct: 268 RKQFGQAIGEFQLVQGKLADMYTRLASSRALVYSVASACDQGRTSRKDCAAAILFA---- 323 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A + +A++ +GG+GYI E R R++ I G+ Sbjct: 324 ---AENATQMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 365 >gi|148654496|ref|YP_001274701.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148566606|gb|ABQ88751.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1] Length = 383 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 45/273 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A T ++ +G + ++G K W S+ ++ I+ A + + Sbjct: 125 LTEPHAGSDAGA-TRTTARLENGEWVINGAKMWITSASVAGHLIVTAVTDPGERHSISAI 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312 +VP G+P GL + + + K+G R + T + F D+ V P E++ Sbjct: 184 IVP----AGTP-GLSFGKPEAKMGLRGSITNAVTFE--------DVRV---PEENLLGRR 227 Query: 313 -----KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADI 362 + L LD + + M + LA+A YAR R G ++ + IAD+ Sbjct: 228 GRGLQQFLAVLDGGRIGIGAMAIGLAQAAFEIASAYARERTAFGKLIGAYESVSNMIADM 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A+ + AA L ++ A D+ + S EAA A++ A C+ +A++ +GG Sbjct: 288 AVGLEAARLLVYQAAWLKDQGRQYSREAAIAKLYASEVGEKICR-------DAIQVLGGY 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GY E + R YR+ + +G G + +L V+ Sbjct: 341 GYSSEYPLERIYRDQ--RLLTIGEGTSEILRVV 371 >gi|322824208|gb|EFZ29682.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 624 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 54/299 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRV--- 253 LTE + GTD+A + ++ + +DG Y ++G K F+S+ D I+LA++ V Sbjct: 189 LTEPQCGTDLAQVKTKAEPCADGTYKINGTKIFISAGDHDMTENIVHIVLARLPDSVPTT 248 Query: 254 ---GCFLVPR--LLEDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 FLVPR + DGS N C L++K+G + +AT +L F N+ G+L+G Sbjct: 249 KGISLFLVPRHVVKPDGSLETNKNVKCVG-LESKMGIKGSATAQLSFENSVGYLIG---- 303 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYAR----RRHVSGGILIDQP- 353 P E MK + ++++A + S V AE A+ YAR +R +SG D+P Sbjct: 304 --APNEGMKQMFTFMNTARVGTSLEGVCHAELAFQNALKYARERGSQRSLSGTKCPDRPN 361 Query: 354 -------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---IMA 397 + +A+A+ RL + EAK S A Sbjct: 362 DPLVWHPNVRQNILFAKAVAEGGRAFLTDMG---RLLDIQGEAKDASLRDALEHEIGFYT 418 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + + ++ GG GYI+ + + R++ +++ G+ LD + Sbjct: 419 PIAKGCLTEWGLEASSRCLQVWGGHGYIKGNGMEQILRDARISTLYEGTTGIQSLDFIG 477 >gi|304311238|ref|YP_003810836.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301796971|emb|CBL45184.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 558 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 30/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 + +TE G+D+A + + + +DG + L+G K W + + + LA+ G Sbjct: 282 VAVTEPNYGSDVAQMRLKATR-TDGGWHLNGEKTWCTFAGKAGVLLTLARTNPDLSVGHR 340 Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300 G FLV + DG + G + IG R + + F N F + G Sbjct: 341 GLTMFLVEKPSSDGHEFNHTQATGGTVSGKAIPTIGYRGMHSFTVFFDNYFVPDSHVIGG 400 Query: 301 DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + V G M + +A + M+ + I YA+ R V G + P+ Sbjct: 401 EAGVGQGFYFTMAGFAGGRIQTAARATGVMQAAFERGIAYAQERQVFGKPIAAYPLTLVK 460 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IA +A+ ++ + ++ +A DE K E A + K + CK + + EAM+ Sbjct: 461 IARMAMLLSVSRQFTYYVARLMDEGKGHME--------ASLVKLYSCKSSEWLCREAMQI 512 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG GY EE +++R++ +S SI G+ + L V+ Sbjct: 513 HGGMGYAEESAVSRYFIDSRVLSIFEGAEETLALKVI 549 >gi|331224454|ref|XP_003324899.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303889|gb|EFP80480.1| isovaleryl-CoA dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 433 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 26/259 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P TS L+E G+D A+ ++ K S+G Y ++G K W +S ++ F++ A Sbjct: 177 PDLSTSKVACFCLSEPGSGSDAFALATRATKDSNGDYIINGSKMWITNSKEAEIFVVFAN 236 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 ++ G CFL+ + + G+ + + K+G ++++T L F N +L Sbjct: 237 LDPSKGYKGISCFLLEKSM------GVEIAKKEEKLGIKASSTCTLNFDNV-KVPKENLI 289 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 G I I L+ + ++ V LA+ A+ Y +R G + + M+ Sbjct: 290 GQEGLGYKYAIEI-LNEGRIGIAAQMVGLAQGAFDKAVKYTYQRKQFGKPVGEFQGMQFQ 348 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AD+ +I AA L++ A +E K +E MA + K + ++A A+E Sbjct: 349 FADVHTEIEAARMLTYNAARLKEEGKPFTE-------MAAMAKLFSSQVAQNASGSAIEW 401 Query: 419 IGGSGYIEERSIARHYRES 437 GG G+ E I +++R+S Sbjct: 402 CGGVGFTRETGIEKYWRDS 420 >gi|302525971|ref|ZP_07278313.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302434866|gb|EFL06682.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 383 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 15/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LV 258 L +TE GG+D+A I + + D Y L+G K F++S F+ G G L Sbjct: 126 LAVTEPDGGSDVAGIRTTAVREGD-EYVLNGAKTFITSGCRADFVTTVVRTGEAGAHGLS 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 ++E G+P G R K+G ++ T EL + + L+G N V + Sbjct: 185 LIVVERGTP-GFTVSRKLEKMGWAASDTAELSYVDVRVPAENLVGAENSGFAQVATQFVT 243 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ + + + +L + + R R G LI + +++ + ++A + A + + Sbjct: 244 ERLSLAVQAYAHAQRALDLTLDWCRMRETFGRPLISRQLVQHKLTEMAGKVDVARTYARQ 303 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A + EA +A+ A T W V+ EA++ GG GY+ E + RHYR Sbjct: 304 VALRHVSGEEVIAEACFAKNTAVQTAEW-------VVNEAVQLHGGLGYMRESEVERHYR 356 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 357 D--VRILGIGGGTTEILTGL 374 >gi|302381946|ref|YP_003817769.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264] gi|302192574|gb|ADL00146.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 593 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/344 (21%), Positives = 151/344 (43%), Gaps = 56/344 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + + + + + PK+ + E+ T + LTE + GT Sbjct: 124 MYPGLTAGAYAGIHANASEELKTKYLPKMATGEWGGT-------------MNLTEPQCGT 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR------VGCFLV 258 D+ + ++ DG Y ++G K ++S+ +D I +LA+VEG + FLV Sbjct: 171 DLGMVRTKAVPQGDGTYKITGQKIWISAGEHDFTDNIIHTVLARVEGAPAGIKGLSLFLV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+++ +DGS N L L++K+G NAT +++ + G+L+G+ + +M Sbjct: 231 PKVMVNDDGSLGERNSLQCAGLEHKMGIHGNATCVMQYDDATGWLIGEEGRG---MNNMF 287 Query: 314 ILI---YLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRA 358 +++ L + + ++ + A+ +A+ R ++ P ++R Sbjct: 288 VVMNEARLGTGLQGLAIGAAAYQAALEFAKDRIQGRSLTGPKNPDAQADSIMVHPDVRRM 347 Query: 359 IADIALDIAAA------TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + + + TAL L S DEA + ++ Y ++ P+ K + V Sbjct: 348 LLEAKAFVEGGQAFVLWTALQADLEKSADEATA-TKAKDYMGLLTPVLKAYLTDKGFHVA 406 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + M+ GGSGY E +++ R++ I G+ LD++ Sbjct: 407 SLGMQVHGGSGYTEHFQASQYLRDARITMIYEGTNGIQALDLVG 450 >gi|226939920|ref|YP_002794993.1| acyl-CoA dehydrogenase, short chain specific [Laribacter hongkongensis HLHK9] gi|226714846|gb|ACO73984.1| acyl-CoA dehydrogenase, short chain specific [Laribacter hongkongensis HLHK9] Length = 384 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + + D Y ++G K F++ +P + + ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYVINGTKRFITNAPHASIYTVMARTNPEIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R +P G+ + +K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NTP-GVSLGKCDHKMGQKGAHTSDVIFDNVRVPASQLIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV LA+++ YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAAERMLADSLQYAMERKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A DE ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 RCMVLDAARKRDEGRNVSTEASCA-------KMFATEMCGRVADRGVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|190890618|ref|YP_001977160.1| acyl-CoA dehydrogenase [Rhizobium etli CIAT 652] gi|190695897|gb|ACE89982.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CIAT 652] Length = 591 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 46/298 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE G+D+ A+ ++ ++ DG Y + G K F++ DA ++LA++ Sbjct: 160 MNLTEPHAGSDVGALKARAERRPDGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPA 219 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295 + FLVP+ L +DGS N L L++K+G + T + + + Sbjct: 220 GTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGGEKGAI 279 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR-------H 343 G+L+G+ N + M +++A ++V V++AEA + YAR R Sbjct: 280 GWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKALAYARERTQGRAPGS 334 Query: 344 VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMAP 398 G+ ++D P + R + + + A+S+ A++ D ++ + + A ++ P Sbjct: 335 TGPGMSPIVDHPDVARMLLTMKALTQGSRAISYACAHAIDMSRRAGDSRHWQERAALLTP 394 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 I K + V + ++ GG G+IEE AR+ R++ I G+ +D++ Sbjct: 395 IAKAFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVT 452 >gi|312113477|ref|YP_004011073.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311218606|gb|ADP69974.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 387 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 125/255 (49%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ ++ +K D Y L+G K W ++P +D ++ A+ + G + Sbjct: 129 LAMSEAEAGSDVVSMRTRAEKRGD-RYVLNGTKMWITNAPHADVLVVYAKTDPTAGQRGI 187 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 L+E G P +L +K+G R + T EL F + + + NV G + +L+ Sbjct: 188 TAFLIEKGMPGFTVSPKL-DKLGMRGSDTAELVFEDCE---VPEANVMGGEGRGVSVLMS 243 Query: 318 ---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + A+++ M+ +L + Y R G + +++ +AD+A+ + +A A Sbjct: 244 GLDYERAVLAAGPLGIMQAALDIVLPYIHERKQFGKPIGTFQLVQGKVADMAVALNSARA 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D A++ E+AA A + + + A V +A++ +GG+GYI + + Sbjct: 304 YVYAVARACDRAQTTREDAAGAIL-------YAAEAATRVALDAIQLLGGTGYINDTATG 356 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 357 RLLRDAKLYEIGAGT 371 >gi|89901524|ref|YP_523995.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89346261|gb|ABD70464.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 387 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 34/268 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + ++E G+D+ I + + SDG Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMSEPAAGSDLQGIKATAIRQSDGSYLLNGSKTFITNGWHADLVIVVAKTNPAAGAKGT 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKI 314 LL + G + K+G ++ T EL F N L G + + G + M+ Sbjct: 184 SLLLVERGMAGFSVGKRLKKMGMKAQDTSELFFDNVRVPADNLLGGPAHENRGFICLMEQ 243 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367 L + L AI +++ + ++ + Y + R V G QPV + +A++ ++ Sbjct: 244 LPWERLQIAIGAIAASQAAIHWTVDYVKERKVFG-----QPVAAFQNTRFTLAELQTEVQ 298 Query: 368 AATAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + N+ D A A + KYWC + V+ E ++ GG Sbjct: 299 IAQVFIDKCTELLMTNTLDTA------------TASMAKYWCSDLQCKVMDECVQLFGGY 346 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E I R Y ++ I G+ M Sbjct: 347 GYMWEYPITRAYVDARPQRIYGGTNEIM 374 >gi|47565708|ref|ZP_00236748.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] gi|47557344|gb|EAL15672.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241] Length = 569 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|302867189|ref|YP_003835826.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302570048|gb|ADL46250.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 606 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 55/304 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E + G+ +A +T++ + DG Y + G K ++S + ++LA++ G Sbjct: 166 LSEPQAGSSLADLTTRAEPQDDGTYRIVGTKMWISGGDHELAENIVHLVLARIPGAPPGV 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295 + F+VP++L D G N + L +K+G R L F + Sbjct: 226 KGLSLFIVPKVLLDDDGNLGPRNDVVLVGLNHKLGYRGTTNTLLNFGEGVHRPYGRAGAV 285 Query: 296 GFLLGDLNVSTGPVEDMKILIYL-DSAIMSVSGMRVSLA-----EAIHYARRRHVSGGIL 349 G+L+G P + + ++ ++ + A + + +L +++ YAR+R + Sbjct: 286 GYLVGQ------PHQGLAVMFHMMNEARIGIGAGATALGYTAYLKSVAYARQRPQGRPVA 339 Query: 350 IDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394 P ++R + + A AL DE K+ EA R Sbjct: 340 DKDPTTPQVPIVAHSDVRRMLLAQKSYVEGALALVLYCGRLLDEQKTAPAEADRERAQLL 399 Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 ++ PITK W + A A++ GG GY + + +H+R++ N+I G+ L Sbjct: 400 LDLLTPITKSWPAQWCLAANDLAIQVHGGYGYTRDYDVEQHWRDNRLNAIHEGTHGIQAL 459 Query: 453 DVLN 456 D+L Sbjct: 460 DLLG 463 >gi|229091330|ref|ZP_04222545.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|228691959|gb|EEL45701.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] Length = 569 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|229155931|ref|ZP_04284032.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] gi|228627538|gb|EEK84264.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] Length = 569 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|86158090|ref|YP_464875.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774601|gb|ABC81438.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] Length = 380 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253 LTE G+D A + + + D Y L G K F+++ P +DA ++ A + + Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181 Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 FLVP R G P+ +K+G R++ + L F + LG+ Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCAIPARYRLGEEG---- 229 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIAD 361 + KI + LD + ++G + +A A YA+ R G + ++ +AD Sbjct: 230 --DGFKIAMGTLDGGRIGIAGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I AA L R A++ D S E+A A++ A +M+ V ++A++ GG Sbjct: 288 MATEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY++E + RH+R+S I G+ Sbjct: 341 YGYVKEFDVERHWRDSRITEIYEGT 365 >gi|258512022|ref|YP_003185456.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478748|gb|ACV59067.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 377 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 32/274 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 PM + GLTE G+D A T + + ++G+K F ++ +++L V Sbjct: 113 PMARGEALGAFGLTEPGAGSD-AGGTRTTAVLEGDEWVITGNKIFNTNGGYAKYVVLTAV 171 Query: 250 EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F+VP E G + K+G R++ TVEL + LLG L Sbjct: 172 TDPASRGISAFIVPTDAE-----GFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPL 226 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 N + L LD ++++ + V +A A + YA+ R G + ++ Sbjct: 227 NAGF-----KQFLSTLDGGRVAIAALAVGIARAAFETALAYAKTRVQFGQAISKFQAIQH 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A+ I A + A D+ + + EA+YA++ A +M +A++ Sbjct: 282 KLADMAMHIDLARNAVMKAAWLKDQGRPYTLEASYAKLFA-------SEMCTRTCEQAIQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +GG GY+ E + RHYR+ A I +G G + + Sbjct: 335 ILGGYGYMREYPVERHYRD--AKLIEIGEGTSEI 366 >gi|163787861|ref|ZP_02182308.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1] gi|159877749|gb|EDP71806.1| acyl-CoA dehydrogenase [Flavobacteriales bacterium ALC-1] Length = 388 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 16/261 (6%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254 AIG L +TE GG+D+A + + K D Y ++G K F+++ + SD I+ A+ +G Sbjct: 121 AIGCLCITEPFGGSDVAGMRTTAVKKGDS-YIINGSKTFITNGVYSDYLIVAAKTSPELG 179 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 + + D G+ +L +K+G R++ T E+ F N ++G+ N + Sbjct: 180 NKGISIFVMDRDTPGISATKL-DKLGWRASDTGEIAFDNVEIPASNIMGEENQGFPYIMQ 238 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L A+ S + +L A Y R G + ++ AD + Sbjct: 239 HFALERLVMAVNSHARAEYALEYAKQYMSERTAFGRTIDKFQALRHTYADCETQMEICKQ 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ +A D +EA +++ + KMA VI + ++ +GG GY+EE +A Sbjct: 299 FNYYVAKRLDMGDYVVKEATMSKLQS-------TKMADDVIYQCLQFLGGYGYMEEYPLA 351 Query: 432 RHYRESPANSILLGSGNAMVL 452 R R+S I G G + +L Sbjct: 352 RMARDSRLGPI--GGGTSEIL 370 >gi|17064982|gb|AAL32645.1| isovaleryl-CoA-dehydrogenase precursor (IVD) [Arabidopsis thaliana] gi|22136242|gb|AAM91199.1| isovaleryl-CoA-dehydrogenase precursor IVD [Arabidopsis thaliana] Length = 409 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K+ DG Y L+G+K W + P ++ ++ A+ + + G + Sbjct: 151 LAMSEPNAGSDVVGMKCKAEKV-DGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGI 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F N F + + N+ + + +L+ Sbjct: 210 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCF---VPEENILDKEGKGVYVLMSG 266 Query: 318 --LDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ +++ + + L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 267 LDLERLVLAAGPLGIVQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A D K ++ A + A + A V +A++C+GG+GYI E + R Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAA-------ERATQVALQAIQCLGGNGYINEYATGR 379 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 380 LLRDAKLYEIGAGT 393 >gi|254253130|ref|ZP_04946448.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] gi|124895739|gb|EAY69619.1| Acyl-CoA dehydrogenase [Burkholderia dolosa AUO158] Length = 395 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 24/243 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A++ + Sbjct: 136 FGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKLNDDGNDTIR 194 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G GL + K+G R++ T E+ + F L+ ++N GP Sbjct: 195 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDDVFVPEENLMPNVNGLRGP------F 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAAT 370 L+SA ++ + AE+ + R++V G L ++++ +AD+ +I Sbjct: 248 TCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGL 307 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 RL DE + E + I K C A + A + +GG+G +E + Sbjct: 308 QGVLRLGRMKDEGTAAVE-------VTSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 360 Query: 431 ARH 433 ARH Sbjct: 361 ARH 363 >gi|94985281|ref|YP_604645.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] gi|94555562|gb|ABF45476.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 392 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + ++ D + L G K W S +D ++++A+ G + CF Sbjct: 135 LTEPGAGSDAASLCLRAEREGD-EWVLHGSKAWITSGGQADTYLVMARTGGPGARGISCF 193 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 +VP+ + GL + R + K+G + T + F N G L ++ + Sbjct: 194 IVPKDM-----PGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQGLVIALASL 248 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A+ ++ R +L A YA R G L + + +A +A I +A Sbjct: 249 DAGRIGI----AMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAARIESA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ + A D+ + +EA+ A+++A T C + +A++ GG+GY E Sbjct: 305 RLVALKAAWLKDQGRPYGKEASIAKLLASETAVDCAR-------DAIQIFGGNGYSREYP 357 Query: 430 IARHYRESPANSILLGS 446 + R YR++ I G+ Sbjct: 358 VERLYRDAKVTEIYEGT 374 >gi|228914944|ref|ZP_04078549.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844740|gb|EEM89786.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|229000130|ref|ZP_04159700.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] gi|229007651|ref|ZP_04165244.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228753602|gb|EEM03047.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228759667|gb|EEM08643.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] Length = 381 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ +D +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKQGD-YYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V PVE++ Sbjct: 188 FIVEKDTQGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA + YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKICEIYEGT 369 >gi|226939151|ref|YP_002794222.1| CaiA [Laribacter hongkongensis HLHK9] gi|226714075|gb|ACO73213.1| CaiA [Laribacter hongkongensis HLHK9] Length = 386 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/398 (22%), Positives = 157/398 (39%), Gaps = 60/398 (15%) Query: 85 HAYGPGGERWDKVEFHP----------AWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHK 134 H P RWD+ E P + L + + GL S D + V + AH Sbjct: 22 HELAPFAARWDEEETFPLDTLRRAGEMGFLGLYTPACYGGLELSRLDSAI--VFEELAHG 79 Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 + YL H M + M+A P + + W P++ + E Sbjct: 80 CTSTAAYLTI-----HNMV-----SWMIASFGAPALAEAWVPRMVTGEL----------- 118 Query: 195 SVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG 251 LG LTE G+D A+++++ ++ D Y L+G K F+S S +++ G Sbjct: 119 -----LGSYCLTEPGAGSDAASLSTRAERHGDH-YVLNGSKMFISGAGSTQVLVVMARTG 172 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304 G V + G+ Y + + K+G S T + F +N G Sbjct: 173 GPGAKGVSAFVVPADAAGVRYGKKEKKMGWNSQPTRSISFEEVSIPVANRLGEEGEGFTF 232 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + ++ +I I A +V + +L A Y R G L ++ +AD+ Sbjct: 233 AMKGLDGGRINI----ATCAVGTAQAALDAAQRYVGERRQFGAPLAQLQNIQFRLADMLT 288 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA + A D+ + E Y + K +A V +A++C GG GY Sbjct: 289 ELVAARQMVRLAAWQLDQ--QQPEAGCYC----AMAKRLATDLAFNVANQALQCFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461 +++ + RH R+ + IL G+ + M L + LL++G Sbjct: 343 LKDFPLERHVRDLRVHQILEGTNDIMRLIIARRLLQEG 380 >gi|169629171|ref|YP_001702820.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977] gi|23573441|gb|AAN38728.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus] gi|169241138|emb|CAM62166.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus] Length = 399 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S V +A + P + + + + R PT M + LG+TE G+D+A Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + ++ + D Y ++G K F++S + F+ A G G V L+ D + G Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R +K+G R + T EL F + L+G N +G ++ M+ L A+ + + Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +L A +AR R G L + +++ +A++A + A + + + + Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E + MA T + C V+ EA++ GG GY+ E I RHYR+ Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375 >gi|52143125|ref|YP_083705.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] gi|51976594|gb|AAU18144.1| acyl-CoA dehydrogenase [Bacillus cereus E33L] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|134294861|ref|YP_001118596.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134138018|gb|ABO53761.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 395 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGADAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L+ +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PDENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|321460436|gb|EFX71478.1| hypothetical protein DAPPUDRAFT_216649 [Daphnia pulex] Length = 422 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 34/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ K SD Y ++G K W SS ++ ++++A + G C Sbjct: 164 LSEAESGSDAFSLKTRAIK-SDDHYIINGSKMWISSSEIAGVYLVMANANPKDGYKGITC 222 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+V ++ +P G+ + ++K+G R+++T + F N +LG+L + Sbjct: 223 FIVDQI----TP-GVSIGKKEDKLGIRASSTCAVHFDNVQVPASNILGELG------QGY 271 Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K I L+ + + V LA+ + Y +R G + D M+ IA +A I Sbjct: 272 KYAIGMLNEGRIGIGAQMVGLAQGCFDATVPYTLQRTQFGKRIFDFQAMQHQIAQVATQI 331 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L + A + +EAA A KY+ ++A ++ +E +GG G+ + Sbjct: 332 ESARLLVYNAARLKEAGLPFVKEAAMA-------KYYAAEVATLTTSKCIEWMGGVGFTK 384 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + + + YR+ +I G+ N + + +E+ Sbjct: 385 DYPVEKFYRDCKIGTIYEGTSNIQLNTIAKYIEQ 418 >gi|312114047|ref|YP_004011643.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311219176|gb|ADP70544.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 597 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/361 (20%), Positives = 145/361 (40%), Gaps = 51/361 (14%) Query: 154 PSVTSA--SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 P +T+ S +A + + + PK+ S E+ T + LTE GTD+ Sbjct: 127 PGLTAGAYSAIASHASDELKALYLPKMVSGEWSGT-------------MCLTEPHCGTDL 173 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPR 260 + ++ DG Y ++G K F++S D ++LA++ V F+VP+ Sbjct: 174 GLMKTRAVPAEDGSYTITGTKIFITSGEHDLTNNIIHLVLAKLPDAPAGSKGVSLFVVPK 233 Query: 261 LL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L +DG P N + +++K+G +++AT + F G+L+ N + M Sbjct: 234 FLPDDDGEPGARNAVSCGSVEHKMGIKASATCVMNFDGAVGWLVAQPNQGMRAMFTMMNA 293 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQPVMKRAIADIA 363 L I + ++ A+ Y + R LI P +++ + + Sbjct: 294 ARLGVGIQGLGIAEIARQNAVIYTKERLQGRSLTGVKAPEKPADPLIVHPDVRKNLLEAK 353 Query: 364 LDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A AL+ + D +A R + ++ P+ K + M + + Sbjct: 354 AFTEGARALAVMIGLGIDRAAHHPDAAVRQQSNDLVALLTPVIKAYYTDMGVETAIKMQQ 413 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475 GG GYI E + + R++ + + G+ LD++ L + G F+T++ + Sbjct: 414 MFGGHGYIREHGMEQFVRDARISMLYEGANAIQALDLVGRKLPQNGGAAVRAFFATIQTE 473 Query: 476 L 476 + Sbjct: 474 I 474 >gi|146091267|ref|XP_001466486.1| isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5] gi|134070848|emb|CAM69207.1| putative isovaleryl-coA dehydrogenase [Leishmania infantum JPCM5] gi|322500163|emb|CBZ35239.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 410 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 53/311 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P W PK+ + E+ +G +G++E GTD+ + +K S+G Sbjct: 135 SPAQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + ++D F++ A+V+G++ F V R G +K G R++ Sbjct: 181 YVLNGSKIWITNGTVADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRAS 235 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLAE- 334 +L L D+ V P E++ ++ L+ ++++ M V +AE Sbjct: 236 HMCQL--------FLEDVVV---PAENLLGEEGKGMVGMMRNLELERVTLAAMAVGIAER 284 Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 YA R G + + ++R IA+ D AA AL + ++++ Sbjct: 285 SVELMTSYASERKAFGQPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPGNKN---- 340 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 R+ + K + +A V A++ +GG GY + + R +R++ I G+ A Sbjct: 341 ---RLGSDAAKLFATPIAKKVADSAIQVMGGMGYSQGMPVERLWRDAKLLEIGGGTIEAH 397 Query: 451 VLDVLNLLEKG 461 ++ L KG Sbjct: 398 HKNITKDLLKG 408 >gi|126435772|ref|YP_001071463.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126235572|gb|ABN98972.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 399 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S V +A + P + + + + R PT M + LG+TE G+D+A Sbjct: 102 STGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGS-----LGVTEPGAGSDVA 156 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + ++ + D Y ++G K F++S + F+ A G G V L+ D + G Sbjct: 157 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 215 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R +K+G R + T EL F + L+G N +G ++ M+ L A+ + + Sbjct: 216 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 273 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +L A +AR R G L + +++ +A++A + A + + + + Sbjct: 274 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 333 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E + MA T + C V+ EA++ GG GY+ E I RHYR+ Sbjct: 334 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 375 >gi|281350594|gb|EFB26178.1| hypothetical protein PANDA_021175 [Ailuropoda melanoleuca] Length = 396 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 119/248 (47%), Gaps = 28/248 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D+ ++ ++ K + Y ++G K W S+ + F+++A V +G C Sbjct: 162 LSEAGAGSDLFSLKTRADKKGN-YYVINGSKMWISSAEYAGVFLVMANVNPDLGYKGITC 220 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E GL + +NK+G R+++T L F N + + N+ K Sbjct: 221 FLVDRDTE-----GLHIGKAENKMGIRASSTCPLTFENV---KIPEANILGQIGHGYKYA 272 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + D ++ +A +A+ + AA Sbjct: 273 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYMKERMQFGKRIFDFQGLQHQVAHVAIQLEAA 332 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ +E +GG GY ++ Sbjct: 333 RLLTYNSARLLEAGQPFIKEASMA-------KYYASEVAGLTTSKCIEWMGGVGYTKDYP 385 Query: 430 IARHYRES 437 + +++R++ Sbjct: 386 VEKYFRDA 393 >gi|193076005|gb|ABO10592.2| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGD-YYILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|94311467|ref|YP_584677.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93355319|gb|ABF09408.1| isovaleryl-CoA dehydrogenase (IVDHase) [Cupriavidus metallidurans CH34] Length = 379 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 26/264 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCF 256 + +G+TE GG+D+ A + + D + ++G K F+S+ MS IML + + G Sbjct: 123 LAVGITEPGGGSDVKACRTTAVRDGDE-WVINGSKTFISNGMSADLIMLVCKTDPAAGAR 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV---- 309 V +L + + G R +K+G + T EL F N G LLG+ N G + Sbjct: 182 GVSLILVETNREGFRCGRKLHKVGQPAADTAELFFDNVRVPAGNLLGEPNQGFGYLMQEL 241 Query: 310 --EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD-I 366 E + I +Y +A+ + +R++L Y + R GG + D K +AD+ + + Sbjct: 242 AQERLIIALYAATALERL--LRITL----EYVKDRKAFGGTVWDFQNTKFKLADVKANAV 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A T + + L K EAA A++ + T + C I + ++ GG GY+ Sbjct: 296 ALRTMVDYYLGEHM-RRKLTVNEAAIAKLYSTETLWKC-------IDDMVQLHGGYGYML 347 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 E IAR + + + ++ G+ M Sbjct: 348 EYPIARAFTDYRVSRVVGGANEVM 371 >gi|254238116|ref|ZP_04931439.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719] gi|126170047|gb|EAZ55558.1| hypothetical protein PACG_04232 [Pseudomonas aeruginosa C3719] Length = 596 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|311032043|ref|ZP_07710133.1| acyl-CoA dehydrogenase [Bacillus sp. m3-13] Length = 378 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ ++ K D Y L+G K F+++ +D +I+ A +G V Sbjct: 124 LTEPSAGSDAGSLKTRAVKQGDH-YVLNGAKVFITNGGEADTYIVFASTNPELGTKGVSA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + G + ++K+G + TV+L F + + N+ E KI + LD Sbjct: 183 FIVEKDTPGFVIGKDEHKMGLHGSKTVQLTFEDA---KVPVANLLGAEGEGFKIAMANLD 239 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + +AE A YA+ R G + Q + +AD+A + A L++ Sbjct: 240 VGRIGIAAQSLGIAESAVQAATAYAKERVQFGKPIAAQQGVSFKLADMATAVEGARLLTY 299 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R AN K +EA+ A++ A T A V EA++ GG GY ++ + R++ Sbjct: 300 RAANLRALGKPCGKEASMAKLFASQT-------AMNVAIEAVQVFGGYGYTKDYPVERYF 352 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 353 RDAKVCEIYEGT 364 >gi|256788690|ref|ZP_05527121.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289772585|ref|ZP_06531963.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289702784|gb|EFD70213.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 383 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 131/309 (42%), Gaps = 59/309 (19%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + W P + S EY +G GLTE G+D +T++ Sbjct: 95 AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y ++G K F+++ +D ++ A+ G FLVP GL Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPT-----DTPGLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322 + + K+G R AT EL +L D+ V P M + L Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243 Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 MSV+ V +A+A + YA R G + +++ I+DIALD+ AA L++R+A Sbjct: 244 MSVAAGCVGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVA 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D + + E++ A++ A + A A++ GG GYI+E + R++ Sbjct: 304 DLIDRGQPFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDA 356 Query: 438 PANSILLGS 446 ++ G+ Sbjct: 357 RVMTLYEGT 365 >gi|218291431|ref|ZP_03495357.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218238721|gb|EED05939.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 377 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 32/274 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 PM + GLTE G+D A T + + ++G+K F ++ +++L V Sbjct: 113 PMARGEALGAFGLTEPGAGSD-AGGTRTTAVLEGDEWVITGNKIFNTNGGYAKYVVLTAV 171 Query: 250 EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 + F+VP E G + K+G R++ TVEL + LLG L Sbjct: 172 TDPASRGISAFIVPTDAE-----GFSVSKPYEKLGMRASNTVELILDHVRVPKENLLGPL 226 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 N + L LD ++++ + V +A A + YA+ R G + ++ Sbjct: 227 NAGF-----KQFLSTLDGGRVAIAALAVGIARAAFETALAYAKTRVQFGQAISKFQAIQH 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A+ I A + A D+ + + EA+YA++ A +M +A++ Sbjct: 282 KLADMAMHIDLARNAVMKAAWLKDQGRPYTLEASYAKLFA-------SEMCTRTCEQAIQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +GG GY+ E + RHYR+ A I +G G + + Sbjct: 335 ILGGYGYMREYPVERHYRD--AKLIEIGEGTSEI 366 >gi|83748989|ref|ZP_00945997.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|83724327|gb|EAP71497.1| Glutaryl-CoA dehydrogenase [Ralstonia solanacearum UW551] Length = 419 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y L+G K W + Sbjct: 137 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 195 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ + F Sbjct: 196 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 254 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353 + + N+ G L+SA ++ + AE+ + R++V +P Sbjct: 255 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAA 312 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 313 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 365 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 366 ARMARDMLGGNGISDEFGVIRH 387 >gi|302868235|ref|YP_003836872.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302571094|gb|ADL47296.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 384 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 19/257 (7%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255 AI LTE+ G+D A I + ++ G + L G K ++ + S +++ A + + G Sbjct: 122 AISFALTEEGAGSDAARIRTTAEREGAG-WRLRGEKIYIGNGGASRYYVVFALTDPQAGT 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLN----VSTGPV 309 + L D +G+ R ++K+G R T L+ G +LGDLN ++ + Sbjct: 181 RGITAFLVDKDADGVVIDRYEDKMGIRGTLTSNLKLDTWVPDGDVLGDLNRGMRLAMQTL 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +I + S ++++G V+ EA RR G +ID + +AD+A I AA Sbjct: 241 SAGRISVAAQSLGVALAGFDVASREAA----RRETFGRPIIDNQGISFPLADVATGITAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++F EA +E I+ + K + ++A + A++ GG G+ + Sbjct: 297 RMITF-------EAARTHQEGGDVGILGAMAKLYASEVAHRAVDTAVQVFGGDGFCKPCP 349 Query: 430 IARHYRESPANSILLGS 446 R YR+ I G+ Sbjct: 350 AERLYRDQRILEIYEGT 366 >gi|228927410|ref|ZP_04090467.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832306|gb|EEM77886.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|228985439|ref|ZP_04145597.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774293|gb|EEM22701.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|239813819|ref|YP_002942729.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239800396|gb|ACS17463.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 598 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/376 (24%), Positives = 158/376 (42%), Gaps = 64/376 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL+ T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALVAHGTEEQKKTYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGRVGC--FLV 258 D+ + ++ + +DG Y ++G+K F+S+ M+D I +LA++ +G G F+V Sbjct: 175 DLGLLRTKAEPQADGSYRITGNKIFISAGEHDMADNIIHLVLARLPDAPKGSKGISLFVV 234 Query: 259 PR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + DGS N + L++K+G NAT ++ G L+G+ N Sbjct: 235 PKYKVKADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGSLVGEPNKGL-----QA 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQ---PVMKRAIAD 361 + + +++A + V + L E A+ YA+ R +SG D+ P++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVR 349 Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 L A A A R F + K R + ++ PI K + Sbjct: 350 KMLLTAKAYAEGGRALQIFCTMLLDKEHHHPDEKVRKDSGELVALLTPIVKAFITDNGHI 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-----LF 465 M+ GG G+I+E + + R++ N I G+ LD+L G N F Sbjct: 410 ATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKF 469 Query: 466 EQLFSTLEQDLGSSGK 481 +L + L ++ G + K Sbjct: 470 GKLVAKLVEEEGVNEK 485 >gi|196043510|ref|ZP_03110748.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|229184564|ref|ZP_04311766.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] gi|196025819|gb|EDX64488.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|228598881|gb|EEK56499.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|94501688|ref|ZP_01308203.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65] gi|94426175|gb|EAT11168.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65] Length = 601 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 37/300 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 167 LTEPHCGSDLGILKTKAEPNADGSYSISGTKIFISAGEHDMAENIVHIVLARLPGAPEGT 226 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + EDGS N + +++K+G NAT + F G+L+G N Sbjct: 227 KGISLFIVPKFNVAEDGSVADRNAVVCGSIEHKMGIHGNATCVMNFDGAKGYLIGPENKG 286 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + +A+ + S A+ YA+ R + +I P Sbjct: 287 LNCMFTFMNTARIGTALQGATAAEGSYQGALAYAKDRLAMRSLTGPKAPEKAADPIIVHP 346 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEA-KSRSEEAAYAR-----IMAPITKYWCCKM 407 ++R + AL + A D K SEE A + PI K + ++ Sbjct: 347 DVRRMLLTQKAFAEGGRALVYLAAQQNDIVHKGESEEERKAADELLGFLTPIAKAFLTEV 406 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ GG G+I E + + R++ ++I G+ LD+L L+ +G +L Sbjct: 407 GCEATNLGVQVFGGHGFIAEWGMEQLVRDAKISTIYEGTTGIQALDLLGRKVLMSQGQSL 466 >gi|49479443|ref|YP_036455.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196033753|ref|ZP_03101164.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|196039887|ref|ZP_03107190.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|228933642|ref|ZP_04096492.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945958|ref|ZP_04108300.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121901|ref|ZP_04251120.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|49330999|gb|AAT61645.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195993433|gb|EDX57390.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|196029146|gb|EDX67750.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|228661550|gb|EEL17171.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|228813706|gb|EEM59985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826102|gb|EEM71885.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|88704121|ref|ZP_01101836.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] gi|88701948|gb|EAQ99052.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] Length = 586 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 27/282 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQV----E 250 + LTE G+D+ + ++ D Y +SG K +++ DA ++LA++ E Sbjct: 163 MNLTESGAGSDLGVMKTRAVPNGD-HYLISGQKIYITWGDHDAVDNIVHLVLAKLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G G FLVP+ L + G N + ++K+G + T + F + G+L+G Sbjct: 222 GSSGISLFLVPKFLVNADGSLGERNDVYPVSTEHKLGIHGSPTCVMAFGDDGGAVGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAI 359 + N + M L + + + +A+ YA+ R V GG+ +I+ P +KR + Sbjct: 282 EENRGLTCMFTMMNEARLKVGLQGLGASEGAYQQALAYAKER-VQGGVPIIEHPDVKRML 340 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEE---AAYARI--MAPITKYWCCKMAPAVIAE 414 + A AL++ A + D A E A+ ARI M P+ K W ++ + + Sbjct: 341 LTMKALNEAMRALAYSEAVTMDLAHYGPESDRVASQARIDLMIPVIKGWMTEVGVELTSL 400 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG GY+EE A++ R+ I G+ D++ Sbjct: 401 GVQVHGGMGYVEETGAAQYLRDVRITPIYEGTNGIQAADLVG 442 >gi|326577417|gb|EGE27301.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis O35E] Length = 509 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/330 (21%), Positives = 139/330 (42%), Gaps = 50/330 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRS-EEAAYA----RIMAPITKYWCCKM 407 ++ + AL + L+ D AK S E +A ++ PITK + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGESPSEVKFADEMLSLLTPITKAFLTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 404 GLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLLG----------- 452 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKED 497 + LGS G+ + + C+E+ Sbjct: 453 -----RKVLGSQGRMLANFTKIIHKFCQEN 477 >gi|260433872|ref|ZP_05787843.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260417700|gb|EEX10959.1| isobutyryl-coa dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 380 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ ++ +DG Y L+G K F+S SDA++ + + G + Sbjct: 124 LTEPGSGSDAAALKTRAERTNDG-YTLNGTKAFISGGGYSDAYVCMVRTGGDGPKGISTV 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 +EDG+P GL + L+ K+G +S T +++F + + N+ + K ++ LD Sbjct: 183 YVEDGTP-GLSFGALEQKMGWKSQPTAQVQFDDC---KIPAENLVGTEGDGFKYAMMGLD 238 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+A + Y R G + ++ +AD+ +++ AA Sbjct: 239 GGRLNIASCSLGAAQAGLDMTLQYMSERKAFGQTIDQFQALQFRLADMEIELQAARTFLR 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D+ A A + K + + V+ + ++ GG GY+ + I + Sbjct: 299 QAAWKLDQG------APDATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKLV 352 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 RDLRVHQILEGTNEIM 368 >gi|188577058|ref|YP_001913987.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521510|gb|ACD59455.1| acyl-CoA dehydrogenase, short-chain specific [Xanthomonas oryzae pv. oryzae PXO99A] Length = 382 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ +L V E + + Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + ++ EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|58581642|ref|YP_200658.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577120|ref|YP_001914049.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426236|gb|AAW75273.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188521572|gb|ACD59517.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 597 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 55/339 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G +++ T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348 P + ++ + +++A +SV + L+E A+ Y R R S + Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338 Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 +I P ++R + I + LS A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSIS 492 G LF T QD ++ + I LRD S Sbjct: 459 TSQAAGLKLFLTDVDTFANAQDGNAALAEFIKPLRDKCS 497 >gi|317507483|ref|ZP_07965209.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974] gi|316254221|gb|EFV13565.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974] Length = 611 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 43/296 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAALQPDGTWHIEGVKRFITSATSDDVFENIFHLVLARPEGAKAG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ D G NG+ +++K+G +++ T EL F G+L+ Sbjct: 224 TKGLSLFFVPKWHYDFTTRTKGERNGVFVTNVEHKMGIKASTTCELTFGQHGVPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + I S+S + + A+ +A+ R V G Sbjct: 284 GEVHDGIAQMFDVIENARMMVGIKSISTLSTAYLNALEFAKER-VQGQDMTQMLNKEAPK 342 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARIMAPI 399 ++ P ++R++ + AL A D A + ++ AY + P+ Sbjct: 343 VTIVHHPEVRRSLLEQKAYAEGLRALYLLTATYQDAAAAERLFGADKDLAYRVNDFLLPL 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 K + A +A+A++ GGSG++++ I ++ R++ +++ G+ LD L Sbjct: 403 VKGVGSEQGYAHLADALQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQALDFL 458 >gi|153833122|ref|ZP_01985789.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01] gi|148870552|gb|EDL69460.1| acyl-CoA dehydrogenase family member 8 [Vibrio harveyi HY01] Length = 384 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA + V + PK+ + ++ LG LTE G+D A++T+ Sbjct: 96 MVASFASEEVKDAFCPKLITGDF----------------LGSYCLTEPNAGSDAASLTTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 K D Y L+G K F+S +D +++A+ G G V + G+ Y R + Sbjct: 140 ATKQGDN-YILNGGKTFISGAGDTDVLVVMART-GDAGAKGVSAFVVPADAEGISYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVS 331 K+G S T + F N LLG+ G V MK L ++ A SV + + Sbjct: 198 PKMGWNSQPTRAVTFDNVSIPASHLLGE--EGQGFVFAMKGLDGGRINIATCSVGTAQQA 255 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L +A Y + R G L ++ +AD+A ++ AA L A+ D Sbjct: 256 LNQAAQYMQERKQFGKSLAQFQALQFKLADMATELVAARQLVRYAASKLDRGDPD----- 310 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + V +A++ GG GYI+E + R++R+ + IL G+ M Sbjct: 311 -ATTYCAMAKRFATDVGFQVCDQALQLYGGYGYIKEYPMERYFRDVRVHQILEGTNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|332262574|ref|XP_003280337.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform 1 [Nomascus leucogenys] Length = 412 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|226361662|ref|YP_002779440.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240147|dbj|BAH50495.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 397 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 41/267 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------- 252 L+E G+D+A I+ + + D + ++G K W + +D ++ A+ + Sbjct: 132 LSEAEAGSDVANISCRATRDGDD-WVVNGTKMWCTYADEADYLVLFARTDPHKDPAKPHR 190 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLL 299 + FL+ + G P G+ +++ KIG +T EL F N GF L Sbjct: 191 GISAFLIDKQ-RGGFPEGISGTKIR-KIGYFGWSTWELSFDNFRVPATAMLGEEGKGFYL 248 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 + G +A ++ R +L ++I Y R G L D ++ + Sbjct: 249 AVSGLEVGRAH---------TAARAIGLARGALEDSIAYLHTRRQFGHELADFQHLRFKV 299 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A +A DI AA L + +A D + S EA+ +++A +MA V +EA++ Sbjct: 300 AKMAADIEAARQLMYSVATDIDTGRRCSLEASMCKLVA-------TEMAERVTSEAVQIH 352 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY + + RH+R++ I G+ Sbjct: 353 GGAGYTTDFQVERHWRDARLTKIFEGT 379 >gi|254462842|ref|ZP_05076258.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206679431|gb|EDZ43918.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 379 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----VEGRVGC 255 L +TE GG+D+ AI ++ K + Y L+G K F+++ I++A EG G Sbjct: 122 LAMTEPSGGSDVQAIKTRAIKEGNS-YKLNGQKTFITNGQHANLILVAAKTNPAEGSKGT 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVED 311 LV +LE G R +KIG + T EL F N L G+ N+ G + Sbjct: 181 SLV--ILETEGAEGFARGRNLDKIGAHAADTSELFFDNVDIPAENILGGEENL--GFYQM 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M+ L L +V M ++A I Y + R GG ++ + +A+ A Sbjct: 237 MQQLPQERLIIGCGAVGAMEGAVARTIEYCKERQAFGGPIMQFQNTRFKLAECQTKTTVA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A DE S + A + KYW + V+ E ++ GG G+++E + Sbjct: 297 RAF-------LDECISEHLKGELTVEKAAMAKYWLTETQGEVLDECLQLHGGYGFMQEYA 349 Query: 430 IARHYRESPANSILLGSGNAM 450 +A + ++ I G+ M Sbjct: 350 VAEMWTDARVQRIYGGTNEIM 370 >gi|83593283|ref|YP_427035.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] gi|83576197|gb|ABC22748.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] Length = 387 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ ++ D + L+G K W + P +D ++ A+ + + + Sbjct: 128 LAMSETGAGSDVVSMRTRAERRGD-TFVLNGSKMWITNGPDADVLVVYAKSDPDLKSRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G +K+G R + T EL F + + NV G E +K+L+ Sbjct: 187 TAFIVEKGWKGFTTGPKLDKLGMRGSNTGELVFEDCE---VPAENVLGGVGEGVKVLMSG 243 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++G + + EA + Y R G + +M+ +AD+ + A A Sbjct: 244 LDYERLVLAGGPLGIMEACLDAVLPYVHERQQFGRAIGSFQLMQGKLADMYTTLCACKAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D K+ S++AA A + A W + EA++C+GG+GYI + R Sbjct: 304 VYAVAQACDRGKATSKDAAGAILFAAEKATW-------MALEAIQCLGGNGYINDYPTGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|41410312|ref|NP_963148.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399146|gb|AAS06764.1| FadE9 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 386 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 36/372 (9%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY---LMAQ 145 P WD E P +LR S G+ +I+ R E V ++ R++ +A Sbjct: 25 PHALEWDAAEHFPV--DVLRESAELGM-AAIYCR--EDVGGSGLRRLDGVRIFEQLAIAD 79 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205 +S A M+ TP K W P++ + + V LTE Sbjct: 80 PTTAAFLSIHNMCAWMIDSYGTPEQRKAWVPRLAAMD-------------VIASYCLTEP 126 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D AA++++ + G Y L G K F+S + SD ++++A+ G + ++E Sbjct: 127 GAGSDAAALSTRAVR-QGGDYVLDGVKQFISGAGASDVYLVMARTGGEGPRGISAFVVEK 185 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YL 318 GS GL + + K+G + T ++ L + G I + L Sbjct: 186 GSA-GLSFGSPEEKMGWHAQPTAQVILEGVRVPADAMLGGAEGEGAGFGIAMNGLNGGRL 244 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + A S+ G + + +A Y R R G L+D+P ++ A+AD+A + + + +R A Sbjct: 245 NIAACSLGGAQAAFDKAGAYVRDRQAFGSPLLDEPTIRFALADMATGLETSRMMLWRAAG 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D E + + K + V +A++ GG GY+ E + + R+ Sbjct: 305 ALDADDPDKVE------LCAMAKRYVTDTCFEVADKALQLHGGYGYLREYGLEKIVRDLR 358 Query: 439 ANSILLGSGNAM 450 + IL G+ M Sbjct: 359 VHRILEGTNEIM 370 >gi|326569434|gb|EGE19494.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC8] Length = 559 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFMNVALLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE-AKSRS-EEAAYA----RIMAPITKYWCCKM 407 ++ + AL + L+ D AK S E +A ++ PITK + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSYFADTVAKGESPSEVKFADEMLSLLTPITKAFLTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 404 GLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLL 451 >gi|229196565|ref|ZP_04323309.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] gi|228586921|gb|EEK44995.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|254515219|ref|ZP_05127280.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3] gi|219677462|gb|EED33827.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR5-3] Length = 586 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 29/283 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQV----E 250 + LTE G+D+ + ++ D Y ++G K +++ DA ++LA++ E Sbjct: 163 MNLTESGAGSDLGVMKTRAVPQGD-HYLITGQKIYITWGDHDAVDNIVHLVLAKLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G G FLVP+ L + G N + ++K+G + T + F + G+L+G Sbjct: 222 GSSGISLFLVPKFLVNADGSLGERNDVYPVSTEHKLGIHGSPTCVMAFGDEGGAIGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKR-- 357 + N + M L + S+ S A+ YA+ R V GG+ +I+ +KR Sbjct: 282 EENRGLACMFTMMNEARLKVGLQSLGATEGSYQLALAYAKDR-VQGGVPIIEHADVKRML 340 Query: 358 ----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 A+++ +A + A++ LA+ DEA+ R+ A +M P+ K W ++ + + Sbjct: 341 LTMKALSEAMRALAYSEAVTMDLAHYGDEAE-RTAAQARIDLMIPVIKGWMTEVGVELTS 399 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG GY+EE A++ R+ I G+ D++ Sbjct: 400 LGVQVHGGMGYVEETGAAQYLRDVRITPIYEGTNGIQAADLVG 442 >gi|207744057|ref|YP_002260449.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|206595459|emb|CAQ62386.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 397 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ + F Sbjct: 174 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353 + + N+ G L+SA ++ + AE+ + R++V +P Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLNRTQFGRPLAA 290 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365 >gi|118477758|ref|YP_894909.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|225864317|ref|YP_002749695.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|118416983|gb|ABK85402.1| acyl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|225789193|gb|ACO29410.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|58581699|ref|YP_200715.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426293|gb|AAW75330.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 439 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 180 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 239 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ +L V E + + Sbjct: 240 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 296 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 297 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 356 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + ++ EAA A++ A W + +A++ GG GY +E + R Sbjct: 357 TLRAAWLKGQGQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 409 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 410 YFRDAKITEIYEGT 423 >gi|21242313|ref|NP_641895.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21107744|gb|AAM36431.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 382 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFLINGKKSWITSGPVAKYIVLFAMTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|301060097|ref|ZP_07200967.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300445799|gb|EFK09694.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 387 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 34/291 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + + + PK+ S EY G G+TE G+D+ A+ S Q D + Sbjct: 104 TDDIKEKYIPKLVSAEY-------------MGGFGITEPNAGSDVMAMKSTAQDKGDH-W 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K W ++ ++D I A + G L ++E + NG+ L +K+G+RS+ Sbjct: 150 LINGSKTWISNTSVADVLIFYAYTDRAARGKGLSAFVIEPKNFNGISTTDL-DKMGSRSS 208 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 T E+ +T + N+ P + KI+ L+ +S + + LA+A Y Sbjct: 209 PTGEIYLEDT---KVPKENILGKPGDGAKIVFGSLNQTRLSAAAGGIGLAQACLDAATSY 265 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397 + R G + + + + I ++ AA + ++ A D+ + E A A Sbjct: 266 CQEREQFGKSIGQFQMNQDMVGQITSELEAARLVVYKAAWQKDQGNLGNTLEVAQA---- 321 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 KY ++A AM+ +G GY E +AR+YR++P ++ GS N Sbjct: 322 ---KYVAGEIAVKASQVAMKILGAYGYSTEYPVARYYRDAPTYQLVEGSTN 369 >gi|300787183|ref|YP_003767474.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299796697|gb|ADJ47072.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 386 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 36/310 (11%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP +H+ S E P + +TE G+D+AA+T++ + D Sbjct: 94 MATPSLHR-----YGSEELKQRYLVPAISGEAVCAVAVTEPDTGSDVAALTTRAVRDGDD 148 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 + ++G K ++++ +D +LA+ G G L ++ +P G R +K Sbjct: 149 -WVINGSKAYITNGTQADWICLLARTSDKPAGGGAGVGLSQIIVPADTP-GFHVSRKLDK 206 Query: 279 IGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329 +G RS+ T EL F+ NT G + G + M L +V GM Sbjct: 207 LGMRSSDTAELTFTDARVPVANTIG------EIDLGFYQQMSQFQNERLAMGYAAVGGME 260 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L Y + R V G LID + +A+++ + ++ A EA R E+ Sbjct: 261 TALTRTADYLKTRKVFGKPLIDNQHLAFTLAELSARLDVLRHYNYAAA----EAYIRGED 316 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A + K ++A + A ++ G GY+EE AR++R+SP SI G + Sbjct: 317 V---NRFATVGKLEAGRLAREISATCLQFHGAIGYMEEMWTARYFRDSPVWSI-GGGADE 372 Query: 450 MVLDVLNLLE 459 ++L VL+ L+ Sbjct: 373 VMLYVLSRLD 382 >gi|300784058|ref|YP_003764349.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793572|gb|ADJ43947.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 378 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 23/270 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 LTE G+D +TS+ + D Y LSG K F++ +P+++ F+ A+ + + Sbjct: 122 LTEAEAGSDPGGLTSRAVRDGD-RYRLSGTKRFITNAPLAEVFVAFARTDPESTGSHGIS 180 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLVP G+P G+ K+G T E+ F + L+G+ G Sbjct: 181 AFLVP----AGAP-GVTVGPHDAKMGQAGAWTSEVVFDDVELAADTLVGEEGKGFGIAMA 235 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L A + V +LAEA+ YAR G ++ + +++ +A+ ++AA A Sbjct: 236 SLARGRLHIAALCVGLAERALAEAVEYARTARQGGRVIGEYQLVQALLAESHAELAAGRA 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +D + R ++ K +C +M V A++ GG+GY+ ++ Sbjct: 296 MVHEAAAKYDSGEDR-------KLGPSSAKLFCTEMLGRVADRAVQVHGGTGYVRGVTVE 348 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R YR++ I G+ L + L KG Sbjct: 349 RIYRDARLFRIYEGTSEIQKLVIARQLLKG 378 >gi|285018539|ref|YP_003376250.1| acyl-CoA dehydrogenase oxidoreductase [Xanthomonas albilineans GPE PC73] gi|283473757|emb|CBA16260.1| putative acyl-coa dehydrogenase oxidoreductase protein [Xanthomonas albilineans] Length = 382 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 30/277 (10%) Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238 ++A QK AI G LTE + G+D A+ + DG + ++G K W S P Sbjct: 103 DEAQKQKYVRAIAQGEQIGAFALTEPQSGSDATAMRCRAVPRDDGSFVINGKKSWITSGP 162 Query: 239 MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TF 295 ++ ++ A E G + + D G + + K+G R++AT E+EF + T Sbjct: 163 VAKYIVLFAMSEPERGARGITAFVIDTDKPGFHRGKTEPKLGIRASATCEIEFQDYHATA 222 Query: 296 GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349 +LG P E KI + LD+ + ++ + LA A + Y + R G + Sbjct: 223 DEVLGT------PGEGFKIAMSVLDAGRIGIASQAIGLARAAYQATLGYVKERKAFGSPI 276 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + + +AD+ + AA L+ R A + + + EA+ A++ A W Sbjct: 277 GAFQMTQAKVADMKCKLDAALLLTLRAAWLKGQGQQFTTEASVAKLTASEAAMW------ 330 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +A++ GG GY +E + R++R++ I G+ Sbjct: 331 -ITHQAVQIHGGMGYSKEMPLERYFRDAKITEIYEGT 366 >gi|228952672|ref|ZP_04114746.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228806948|gb|EEM53493.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST 471 L V +L K EQL T Sbjct: 403 LTVAKMLMKQ---IEQLEDT 419 >gi|221633320|ref|YP_002522545.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159] gi|221156735|gb|ACM05862.1| acyl-CoA dehydrogenase [Thermomicrobium roseum DSM 5159] Length = 408 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 128/283 (45%), Gaps = 35/283 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W P++ + EY LTE G+D+AA+ ++ ++ D +Y L+GH Sbjct: 124 RRWLPRLAAGEY--------------ASFALTEPDAGSDVAALATRAERCGD-VYVLNGH 168 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W ++P++ F++ A+ + + G + + + G+ + L+ K+G R+ + E+E Sbjct: 169 KRWIGNAPIASFFVVFAKTDPQAGHNGISVFVVERESTGIVTRPLR-KLGQRAISNGEIE 227 Query: 291 FSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 F + G ++ + + ++ A +R L E++ YA++R Sbjct: 228 FHDVVVPANQRIGREGEGFAIAMQTLRRTRPMV----AAFGAGIIRRCLDESLAYAQQRR 283 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +I + +AD+ + + AA L++ A D+ + + AA A+ A + W Sbjct: 284 TMGQPIIRHQAIGHKLADMQIRLEAARQLTYLAAWLADQGEDNTMAAAVAKAFAADSAMW 343 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG+GY + + + +R++ I G+ Sbjct: 344 AA-------TEAVQVFGGNGYSPDYPVEKLFRDAKLLQIYEGT 379 >gi|154686272|ref|YP_001421433.1| YngJ [Bacillus amyloliquefaciens FZB42] gi|42491133|emb|CAE11270.1| YngJ protein [Bacillus amyloliquefaciens FZB42] gi|154352123|gb|ABS74202.1| YngJ [Bacillus amyloliquefaciens FZB42] Length = 380 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 GLTE G+D ++ +K G Y ++G K ++++ +++ V G+ G + Sbjct: 123 FGLTEPNAGSDAGGTQTKAEK-KGGDYVINGEKCWITNANYARTVIVTAVTGKNSAGKPI 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + L+ G +K+G R + T EL + LLGD P + K Sbjct: 182 ISALIVPTDTPGFTITNPYDKMGVRGSDTAELVLEDVRVPADNLLGD------PEKGFKQ 235 Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +Y LD +S++ + V +A+ ++ YA+ R G + ++ +AD+A++I Sbjct: 236 FLYTLDGGRISIAALAVGIAQGALEASLSYAKERKQFGSPISSFQAIQFKLADMAMEIDL 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + + A D+ ++EAA+A++ + +MA +A++ GGSGY++E Sbjct: 296 ARQMVLKAAWLKDQNLPFTKEAAFAKL-------YASEMAVRTCLQAIQIHGGSGYMKEC 348 Query: 429 SIARHYRESPANSILLGSGNAMV 451 + R R+ A + +G G + + Sbjct: 349 GVERMLRD--AKLMEIGEGTSEI 369 >gi|309774765|ref|ZP_07669787.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53] gi|308917450|gb|EFP63168.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53] Length = 634 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K GLTE G+D AA T + Y L+G K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSD-AAGTETTAVLEGDHYILNGGKIFITNADKADTYVVFAS 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + +K+G RS++T EL F++ + N+ Sbjct: 172 TNPDMGTRGISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q V+ +AD+ Sbjct: 229 GQGFKIAMSTLDGGRIGIAAQALGIAQGAYEHALEYAKERVQFGKPIAQQQVISFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A E K E MA K + +A + +A++ GGS Sbjct: 289 ATKLRCARMLIYSSA----ELKENHEPYGMESAMA---KQYASDVALEICNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|207728208|ref|YP_002256602.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206591453|emb|CAQ57065.1| glutaryl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 397 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ + F Sbjct: 174 SPIADVFVVWAKLPDENGEDPIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDDVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--- 353 + + N+ G L+SA ++ + AE+ + R++V +P Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRTQFGRPLAA 290 Query: 354 --VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 NQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARMARDMLGGNGISDEFGVIRH 365 >gi|10580725|gb|AAG19565.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] Length = 340 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 125/274 (45%), Gaps = 35/274 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ +G ++E G+D+A++++ +K D + + G+K W + + D F++L + Sbjct: 71 PVTAGDAIMGSAISEPDTGSDVASVSATAEKDGD-EWIIDGNKMWITNGSVGDYFVVLCR 129 Query: 249 VE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGF 297 + GR F +++ + +G +++ K+G R++ T EL N G Sbjct: 130 TDPDASGRYEGF--SQIVVESDRDGFTAEKITGKLGIRASDTAELVLDAVRVPEENLIGT 187 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 G ++++ + D +V+ V +A A+ YA+ R G + D Sbjct: 188 RGGGF---------LQLMQFFDETRTTVAAQGVGIARGATERALAYAQEREQFGQPVADF 238 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +A++ AA L+ + A S D R ++ +A + K + ++A V Sbjct: 239 QAIQHKLAEMQTKTEAARTLTRKSAWSVDH---RDDQLT---ALASMAKSFASRIAVEVA 292 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG+GY+ + + R YR++ + G+ Sbjct: 293 DEAVQIHGGAGYVNDFDVERFYRDAKITQLYEGT 326 >gi|107104289|ref|ZP_01368207.1| hypothetical protein PaerPA_01005363 [Pseudomonas aeruginosa PACS2] gi|254243932|ref|ZP_04937254.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192] gi|126197310|gb|EAZ61373.1| hypothetical protein PA2G_04762 [Pseudomonas aeruginosa 2192] Length = 596 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|225182056|ref|ZP_03735487.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167269|gb|EEG76089.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 381 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 39/306 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S EY +G LTE G+D +A+ + ++ D Sbjct: 103 TEEQKQKYVPKLASGEY--------------VGAFALTEPGAGSDASALRTSAKRDGDD- 147 Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+S+ + + + A V+ G + L + G ++ K+G ++ Sbjct: 148 YVLNGTKIFISNGGHAQVYTVFATVDKGQGTKGITAFLVEKDTPGFKVGAIEKKMGLNAD 207 Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EA 335 T EL F + LG E KI + LD + + + +A EA Sbjct: 208 VTTELVFEDCRIPASQRLGKEG------EGFKIAMSLLDGGRIGIGAQGLGIAQAAYDEA 261 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + YA+ R G + + + +AD+A +I AA L + +A R E Sbjct: 262 LKYAQFREQFGQPIFNNQAIAFKLADMATEIEAARLLVY-------QAAFRKENGLPNGK 314 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + K++ A V EA++ +GG GY E + R R++ I G+ L + Sbjct: 315 QASMAKFYATDTAMKVTTEAVQVLGGYGYSREYPVERLMRDAKITQIYEGTNQIQRLVIS 374 Query: 456 NLLEKG 461 +EKG Sbjct: 375 KAIEKG 380 >gi|297195580|ref|ZP_06912978.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197721403|gb|EDY65311.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 390 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257 L+E G+D A++ ++ + D W ++D + +LA+ VEG G FL Sbjct: 133 LSEPASGSDAASLRTKAVRDGDDWVVTGTKAWITHGGVADFYTVLARTGVEGPRGITAFL 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T +L F G + D + I L Sbjct: 193 VP-----GDAPGLNPAVPEKKMGMKGSPTAQLHFD---GVRIPDSRRIGEEGQGFAIALS 244 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A A Sbjct: 245 ALDSGRLGIAACAIGVAQAALDEALGYATGRKQFGRPIADFQGLRFMLADMATRIEAGRA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S +AA A K +C A +V +A++ +GG GY ++ + Sbjct: 305 LYLAAARLRDAGRPFSRQAAMA-------KLFCTDAAMSVTTDAVQVLGGYGYTQDFPVE 357 Query: 432 RHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 358 RFMREAKVLQIVEGT 372 >gi|307296301|ref|ZP_07576128.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1] gi|306878103|gb|EFN09326.1| Butyryl-CoA dehydrogenase [Sphingobium chlorophenolicum L-1] Length = 403 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 32/264 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEG------RVG 254 L+E G+D++ IT Q ++ D + ++G+K++ + FI +L ++EG + Sbjct: 131 LSEPGTGSDLSGITCQARRDGD-HWVITGNKYWCTYADGANFIRVLCRLEGEDEPSGKAK 189 Query: 255 CFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT-----------FGFLLGDL 302 ++P G P G+ + KIG T EL F + G+ G + Sbjct: 190 TAIIPVEKPAGQLPEGVTGNPIP-KIGYYGWKTWELRFEDVRVPIQSTDEAPLGYGGGGV 248 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 N + + L +A S+ R +L +AI YA+ R G + D ++ IA + Sbjct: 249 NAAAQSLS----LARAHTAARSIGLARGALEDAIAYAKDRVQFGQPISDFQAIRFKIATM 304 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ AA L + D ++ R+ + KY+ +MA V +EA++ GGS Sbjct: 305 ATEVEAARQLLHYVCAEIDAGRAE-------RVHTSMVKYFAAEMAERVTSEALQIHGGS 357 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY ++ RH+R++ I G+ Sbjct: 358 GYTTLHAVERHWRDARLTKIFEGT 381 >gi|260557633|ref|ZP_05829847.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260408806|gb|EEX02110.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSNAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|255595297|ref|XP_002536273.1| acyl-CoA dehydrogenase, putative [Ricinus communis] gi|223520232|gb|EEF26111.1| acyl-CoA dehydrogenase, putative [Ricinus communis] Length = 367 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 26/279 (9%) Query: 168 PRVH--KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225 P VH D + +++ P + + +AI TE G+D A + + ++ D Sbjct: 81 PGVHIIVDHGSEALKKKWLPEIASGRSRNCIAI----TEPHAGSDAARMLTSARREGDH- 135 Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+S+ + + +LA + G + L D + G R +G + Sbjct: 136 YVLNGTKTFISNANHAHSITVLASTDRAAGKHGISAFLLDTTTPGFEVARTMPTMGWMDD 195 Query: 285 ATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 + E+ F++ LLG+ L+ + + + + L+ ++ +++L E I Sbjct: 196 SLCEITFTDCRIPVENLLGEEGRGLSYAMSGLNEGR----LNVGCQALGPAQIALDETIE 251 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 +AR R G L + ++ IAD+A+D+ AA + F EA R+ AR+ A Sbjct: 252 HARTRVTFGQALAEHQAIQHMIADMAMDLHAARMVLF-------EAVWRATRGEDARMKA 304 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + K C + A + +A++ GGSGY + R YR+ Sbjct: 305 SMVKVICTEAACRIADKALQIFGGSGYCRGTIVERVYRD 343 >gi|289670077|ref|ZP_06491152.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 382 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|226360658|ref|YP_002778436.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226363908|ref|YP_002781690.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226239143|dbj|BAH49491.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242397|dbj|BAH52745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 384 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 45/375 (12%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ + P +LR++ G+ I+ R E V + ++ AAR++ QL Sbjct: 25 PHAVEWDQTKHFPV--DVLRKAASLGMG-GIYVR--EDVGGSELTRVDAARIF--EQLAK 77 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207 G PS+ + + M T W F E P +G LTE Sbjct: 78 G---CPSIAAYISIHNMVT------WMIDRFGTEEQRHQWVPRLCAMDQLGSYCLTEPGA 128 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGR---VGCFLVPRLL 262 G+D AA++++ + D + L+G K F+S + S+ ++++A+ EG + F+VP+ Sbjct: 129 GSDAAALSTRAVRDGDD-FVLNGVKQFISGAGTSEVYVVMARTGEGGPRGISAFIVPK-- 185 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKIL 315 GL + + K+G + T ++ F +N G G ++ + ++ Sbjct: 186 ---ESAGLSFGPNEVKMGWNAQPTRQVIFEDVRVPAANLLGSEGGGFRIAMAGLNGGRLN 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 I A SV G + +L +A+ Y R G L+D ++ +AD+ ++ AA L +R Sbjct: 243 I----AACSVGGAQTALDKAVAYLADRKAFGAALLDSQALQFQLADMRTELEAARTLLWR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + +E E + + K + V A++ GG GY+ E I + R Sbjct: 299 AAAALEEGAPDVVE------LCAMAKRFATDTGFEVANRALQLHGGYGYLAEYGIEKIVR 352 Query: 436 ESPANSILLGSGNAM 450 + + IL GS M Sbjct: 353 DLRVHQILEGSNEIM 367 >gi|152996282|ref|YP_001341117.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp. MWYL1] gi|150837206|gb|ABR71182.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1] Length = 589 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 53/336 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S+ + ++L + + + PK+ + E+ T + LTE G+D+AAI Sbjct: 129 SLGAIEAISLHASAELKNLYLPKMLAGEWAGT-------------MNLTEPAAGSDLAAI 175 Query: 215 TSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---------QVEGRVGCFLVPR-L 261 + D ++ + G K F++ MSD I L V+G + F+VP+ + Sbjct: 176 ACKATPDGD-VFRIKGQKIFITWGDHQMSDNIIHLVLARLPNAPDGVKG-ISLFIVPKFI 233 Query: 262 LED-GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 L D G P N + +++K+G ++ T + F + G+L+G N ++ M Sbjct: 234 LNDLGEPAHRNDVQVVSVEHKMGIHASPTCVMSFGDKEGAVGYLVGQENEG---IKAMFT 290 Query: 315 LIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGI-------LIDQPVMKRAIADIAL 364 ++ + + G+ +S +A+ YA+ R + +I+ P + R + + Sbjct: 291 MMNNARQGVGLQGLAISERAYQQALAYAKERKQGMNVERTARAAIIEHPDVLRMLMTMKS 350 Query: 365 DIAAATALSFRLANSFDE---AKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECI 419 I A +L + A D A ++ A AR + PI K W + A + + A++ Sbjct: 351 QIDAMRSLIYVAAVENDMSHLASGDDQQQAIARTALYTPIVKGWITEQAQEITSLAVQVH 410 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG G+IEE +A+H R++ I G+ +D++ Sbjct: 411 GGMGFIEETGVAQHARDARILPIYEGTNGIQAIDLI 446 >gi|73544305|ref|XP_848047.1| isovaleryl-coA dehydrogenase [Leishmania major strain Friedlin] gi|321438401|emb|CBZ12155.1| putative isovaleryl-coA dehydrogenase [Leishmania major strain Friedlin] Length = 410 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 43/282 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P W PK+ + E+ +G +G++E GTD+ + +K S+G Sbjct: 135 SPEQRARWLPKVLTGEH--------------VGAMGMSEPSAGTDVLGMRMTAKKDSNGN 180 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + ++D F++ A+V+G++ F V R G +K G R++ Sbjct: 181 YVLNGSKIWITNGSVADVFLIYAKVDGKITAFTVER-----GTKGFTQGPKIDKCGMRAS 235 Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336 +L + LLG+ G V M+ L+ ++++ M V +AE Sbjct: 236 HMCQLFLEDVVVPAENLLGE--EGKGMVGMMR---NLELERVTLAAMAVGIAERSVELMT 290 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA-NSFDEAKSRSEEAAYARI 395 YA R+ G + + ++R IA+ D AA AL + ++ N + K+R A Sbjct: 291 SYASERNAFGQPISNFGQIQRYIAEGYADTEAAKALVYSVSHNVHPDNKNRLGSDAAKLF 350 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 PI K V A++ +GG GY + + R +R++ Sbjct: 351 ATPIAK--------KVADSAIQVMGGMGYSKGMPVERLWRDA 384 >gi|307610654|emb|CBX00242.1| hypothetical protein LPW_19871 [Legionella pneumophila 130b] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 36/281 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P+I S E L LTE G+D+ + +Q D K+ Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++D F++LA +G+ L L+E G+ +GL + N +G RSN E+ F N Sbjct: 155 ITLGQIADLFLVLANCQGQ----LTAVLVEKGT-SGLIITPMSNFLGLRSNMLAEIFFDN 209 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 LLG + + V I LD + + V L +A + Y ++R Sbjct: 210 CRIPKTNLLGSIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 L + ++++ I ++ + + AA L F E + + A A + I KY Sbjct: 266 DRRLDEHQLIQKMITEMVVQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KM V A++ G +G+ E + R+YR++ I+ G+ Sbjct: 320 KMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360 >gi|301059557|ref|ZP_07200469.1| putative gas vesicle protein GvpC repeat protein [delta proteobacterium NaphS2] gi|300446322|gb|EFK10175.1| putative gas vesicle protein GvpC repeat protein [delta proteobacterium NaphS2] Length = 385 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 41/272 (15%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-- 253 + GLTE G+D++ + ++ + DG Y ++G K F+S + ++D + A+ + V Sbjct: 120 VAFGLTEPNAGSDVSGLKTRA--VRDGEDYIINGTKIFISHADIADVICIAARTDTTVPG 177 Query: 254 ----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--- 306 G F+V E GS +G + ++K+G R ++TVE+ +L D+ V Sbjct: 178 PRGTGIFIV----EKGS-SGFTIGKHEDKMGVRGSSTVEI--------ILEDVRVPAKNL 224 Query: 307 --GPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 G IL+ LD + V+ V +A+ AI Y + R G L ++ Sbjct: 225 LGGESLGFPILMKTLDLTRIPVASQAVGIAQGALDYAISYTKERTQFGKPLFSFQGLQWM 284 Query: 359 IADIALDIAAATALSFRLANSFDEAKSR----SEEAAYARIMAPITKYWCCKMAPAVIAE 414 +AD+A + AA L+++ A+ F++ +EA MA K + + A V + Sbjct: 285 MADMATQVEAARQLTYKAASVFEKFPKNLDRLPKEAVRQSAMA---KLFAGETAMKVTTD 341 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ +GG G+++E + R R++ I G+ Sbjct: 342 AVQLLGGYGFVKEYPVERMMRDAKITQIYEGT 373 >gi|116330037|ref|YP_799755.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123726|gb|ABJ74997.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 586 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 56/361 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W P+I + +Y + + LTE G+D+ + ++ + ++G++ ++G Sbjct: 170 EKWLPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDTNGVWRVNGA 216 Query: 232 KWFLSSPMS-----DAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 K F++ + LA+ G + L G N + +++K+G + Sbjct: 217 KRFITHACGYIGAPSVILTLARTGSLESGARGLSFFLVKG--NDVHIAGVEHKMGLHCSP 274 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 T E+ F N+ G L+G TG + +++A ++++ + +A A +Y +++ S Sbjct: 275 TCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAYYEGKKYAS 330 Query: 346 GGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------EAKSRSEE- 389 I +P+ + R I D + +I A L + D +A+ +SE Sbjct: 331 ERIQFGKPIEQIPAVRKILDRMEREILATRVLIVETGKAIDLYHWPKERLIKAEGKSERD 390 Query: 390 ----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 A + P++KY+ + A+ ++A++ GGSGY E+ +AR YR+S Sbjct: 391 VSQDETIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVARIYRDSRI 450 Query: 440 NSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITILRDSISLC 494 +I G+ ++ + + G + QL E++L KKV + L S+ L Sbjct: 451 TTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYAEEELSKFSPSEDLKKVWSDLNTSVGLY 510 Query: 495 K 495 K Sbjct: 511 K 511 >gi|316934920|ref|YP_004109902.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602634|gb|ADU45169.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + + ++ D Y ++G K F++S + I+L V G+ G Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R+++K+G S+ T +L F++ + DL + E + Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAA + A+ + EA+ A+++A T A AV + A++ +GG GY++ Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLLASET-------AEAVCSSAIQTLGGYGYLK 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365 >gi|54024525|ref|YP_118767.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54016033|dbj|BAD57403.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 381 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 21/266 (7%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--- 250 + + +G+TE G+D+ I ++ + D Y ++G K F+++ + D I+ A+ + Sbjct: 119 EMVLSIGMTEPGTGSDLQNIKTRAVREGDE-YVITGSKIFITNGWLCDGIIIAAKTDPTK 177 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307 G G L+ + D +P G R+ +KIG + T EL F LLG+ G Sbjct: 178 GAAGVSLIFAEVGDDTP-GFTRGRILSKIGGKGQDTAELFFDGLRVPASNLLGEAE-GQG 235 Query: 308 PVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + M++L L +A+++V M ++ + Y + R G +P+ A+ + + Sbjct: 236 FYQMMQLLAQERLVTAVIAVPMMEKAVQLTVEYTKGREAFG-----KPLY--AMQNTKFE 288 Query: 366 IAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +A ++ R+A +F D+A + A +TKYW V+ ++ GG GY Sbjct: 289 LAECATIA-RVARTFLDDAIVKHLRGELDIPTAAMTKYWITDQLGGVVDRCLQLFGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E I++ Y + IL GS M Sbjct: 348 MTEYPISQLYTGARVLRILAGSNEVM 373 >gi|304392107|ref|ZP_07374049.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] gi|303296336|gb|EFL90694.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] Length = 390 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 43/315 (13%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ + T + W PK+ S + V LTE G+D AA+ ++ Sbjct: 102 AWMIDVNGTEEQRQHWLPKMTSMD-------------VVASYCLTEPGSGSDAAALKTK- 147 Query: 219 QKISDGI-YCLSGHKWFLSSPMSDA-FIMLAQVE----GRVGCFLVPRLLEDGSPNGLCY 272 + DG Y LSG K F+S ++ + ++A+ G V CFL+ EDG+P GL + Sbjct: 148 -AVKDGNEYVLSGTKQFISGAGTNGLYAVMARTSDDGAGGVSCFLI----EDGTP-GLSF 201 Query: 273 QRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 + K+G T ++ +N G ++ ++ ++ I SV Sbjct: 202 GPQEKKMGWHVQPTAQVILDDCRVPPANMLGGEGNGFRIAMSGLDGGRLNI----GACSV 257 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 G +++L +A YA R G + + +AD+A ++ AA L + A D + Sbjct: 258 GGAQLALEKAQAYATERSAFGKPIGQFQATQFKLADMATELEAARVLLYSAAAKLD---A 314 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 ++ +A A MA K + V +A++ GG GY+ + + + R+ + IL G Sbjct: 315 KAPDATKACAMA---KRFATDTGSKVANDALQIFGGYGYLADYGVEKIVRDLRVHQILEG 371 Query: 446 SGNAMVLDVLNLLEK 460 + M + + +EK Sbjct: 372 TNEIMRVIISRAMEK 386 >gi|302867580|ref|YP_003836217.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302570439|gb|ADL46641.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 380 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E +GG+D AA+T++ + D Y ++G K W + ++D + + + G G + Sbjct: 126 LSEPQGGSDAAALTTRAVRDGDA-YVVTGTKAWITHARVADFYNIFCRTGG-PGPKGISC 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 LL D S G+ Q + +G ++ ++ F + + + G I + LD Sbjct: 184 LLADRSTAGIHPQAAERTMGLHASPIAQIAFDDA---RVPAERLIGGEGAGFTIAMSALD 240 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 S + ++ V LA+ A+ YAR R G +ID + +AD A I+AA AL+ Sbjct: 241 SGRLGIAACAVGLAQGALDYAVGYARERRQFGRAIIDFQGLGFNLADAATQISAARALTL 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D + S EAA A++ A +A V +A++ +GG+GY+ + + R+ Sbjct: 301 AAARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVERYM 353 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 RE+ I+ G+ L + L KG Sbjct: 354 REAKVLQIVEGTNQIQRLVISRALAKG 380 >gi|262279538|ref|ZP_06057323.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259889|gb|EEY78622.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 378 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + ++G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDQ-WVINGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP + G R+++K+G ++ T + N L +L G E KI Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLENCR-IPLENLVGQEG--EGYKIA 233 Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + A SV R + A+ YA +R G L+ + +AD+A I AA Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANQRKAFGVELVQHQAVSFRLADMATQIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A DE +E++ A++ A MA V ++A++ GG GY+ + Sbjct: 294 HQLVLHAATLKDEGLPCLKESSMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDFP 346 Query: 430 IARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 347 VERIYRDVRVSQIYEGASD 365 >gi|71065524|ref|YP_264251.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71038509|gb|AAZ18817.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 594 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 40/291 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----EGR 252 LTE GTD+ I ++ DG Y +SG K F++ ++D I +LA+ EG Sbjct: 166 LTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGS 225 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L EDGS N L +++K+G +++AT + F + G+++G N Sbjct: 226 KGISLFVVPKFLVNEDGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGM---RVSLAEAIHYARRR------------HVSGGILI 350 + M I++ + M + G+ ++ A YA R +I Sbjct: 286 ---LSSMFIMMNYERVTMGLQGLGGSELAYQNAALYANDRGQGRSDTQVQSPEKPADAII 342 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 ++R + + + A+ + +A + D K ++ A ++ P+ K + Sbjct: 343 HHADVRRMLLNAKANTEASRCFAMYVAKNLDAEKFSTDPEAAQAATARVALLTPVAKAFL 402 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + + GG GYI E + + R++ I G+ LD+L Sbjct: 403 TDKALEATVDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLL 453 >gi|288959447|ref|YP_003449788.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] gi|288911755|dbj|BAI73244.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] Length = 611 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 49/298 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + +TE + G+D+AA S+ D + ++G K F++ +++ I L + Sbjct: 167 MNITEPQAGSDLAATRSRAVPNGD-HHLVTGQKIFITYGDHDLTENIIHLVLARLPDAPS 225 Query: 248 QVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 V+G + F+VP+ L + G+ N + L++K+G + T L F + GFL+ Sbjct: 226 GVKG-ISLFVVPKFLVNADGGLGARNQVKCVSLEHKLGIHGSPTAVLSFGDEGGATGFLV 284 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL----- 349 G+ N +E M ++ A ++V+ +S+AE A+ YAR R V G L Sbjct: 285 GEPNRG---LEYM--FTMMNHARLAVAMQGLSIAERAYQQALAYARDR-VQGKPLGWTEG 338 Query: 350 -----IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAP 398 ++ P ++R + + I A L + A + D A ++E A R ++ P Sbjct: 339 RPKGIVNHPDVRRLLMGMKARIEAMRGLLYTAAAAVDVAHHHADEDARGRAALLVDLLTP 398 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 I K WC + A+ ++ ++ GG G+IEE A+H R++ +I G+ D++N Sbjct: 399 IAKGWCTETGQALASDGVQVHGGMGFIEETGAAQHLRDARITTIYEGTTAIQANDLIN 456 >gi|315499057|ref|YP_004087861.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] gi|315417069|gb|ADU13710.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] Length = 389 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 28/243 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A++ + ++ +DG Y L+G K W +SP++D F++ A+++G + F++ Sbjct: 134 FGLTEPDAGSDPASMRTTARRAADG-YVLNGTKMWISNSPIADVFVVWAKLDGIIRGFVL 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 D +GL ++ K+ R++ T E+ N LL ++ GP Sbjct: 193 -----DKGMSGLSAPKIHGKLSLRASITGEIVMDNVLVGEDALLPNVEGLKGPFG----- 242 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +I Sbjct: 243 -CLNRARYGISWGVMGAAEDCWHRARQYGLDRQQFGRPLAQTQLFQKKLADMQTEITLGL 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FD + + E M + K C A + A + GG+G EE + Sbjct: 302 QASLRVGQLFDAGQVQPE-------MISLIKRNNCGKALDIARMARDMHGGNGIHEEYHV 354 Query: 431 ARH 433 RH Sbjct: 355 MRH 357 >gi|229069862|ref|ZP_04203144.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] gi|228713265|gb|EEL65158.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST 471 L V +L K EQL T Sbjct: 403 LTVAKMLMKQ---IEQLEDT 419 >gi|229173035|ref|ZP_04300586.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] gi|228610368|gb|EEK67639.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAQNVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|242814012|ref|XP_002486284.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218714623|gb|EED14046.1| glutaryl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 426 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ + ++ G Y LSG K W +SP+SD ++ A++E G++ Sbjct: 162 FGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGAKTWITNSPISDVLLVWAKLESTGKIK 221 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 FL+ R P L +KNK R++ T ++ N +L + +GP Sbjct: 222 GFLIER--SKCPPGTLETPAIKNKTALRASITGMIQMDNCPVPEENMLPTVEGLSGP--- 276 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G+ +L +A+ AR R+ G L ++++ +AD A D Sbjct: 277 ---FTCLNSARLGIAFGVTGALEDALSRAREYSLDRKQFKGNPLAKYQLIQKKLADAATD 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A D KS E M + K C A A E GG+ Sbjct: 334 AAFGTLAAIQVARLKDAGKSTPE-------MISMIKRQNCDRALANARTLQEIFGGNATS 386 Query: 426 EERSIARH 433 +E I RH Sbjct: 387 DEYHIGRH 394 >gi|296269561|ref|YP_003652193.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296092348|gb|ADG88300.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 389 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 44/269 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L +TE G+D AA+ ++ + D Y L+G K W ++P ++ FI+ A ++ V Sbjct: 131 LAVTEPGVGSDAAALQTRAVRQGDH-YVLNGQKTWISNAPYAEYFIIFATIDPSLRSKGV 189 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311 F+VPR + GL + K+G R E+ L D+ V PVE+ Sbjct: 190 TAFVVPR-----NTPGLSVGKPMRKMGQRGIVNAEV--------FLDDVRV---PVENRL 233 Query: 312 -------MKILIYLDSAIM----SVSGMRVSLAEAI-HYARRRHVSGGILIDQPVMKRAI 359 ++ D++ + S +G+ + +A YA+ R G +I+ + + Sbjct: 234 GDEGQGFYGLMRTFDASRILIGASATGLARAALDAALQYAKERRQFGTAIINHQAVAFRL 293 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + A L+ R A +D+ S +EEA+ A+++A W V A A++ Sbjct: 294 ADMAAKVDTAHLLTVRAARLYDQGLSVTEEASMAKLVASENASW-------VTAAALQTH 346 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448 GG GY E + R R++ I G+ + Sbjct: 347 GGWGYSREFPLERWMRDAKLEEIEEGTSD 375 >gi|70729530|ref|YP_259268.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] gi|68343829|gb|AAY91435.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens Pf-5] Length = 628 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + A + LTE GTD+ I ++ + ++G Y +SG K F++ D + Sbjct: 192 PMYEGRWAGSMCLTEAHAGTDLGIIRTRAEPQANGSYRISGSKIFITGGEQDLTENIIHL 251 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP++ D G+ N + +++K+G +++AT L F Sbjct: 252 VLAKLPDAPAGPKGISLFLVPKIHVDANGNLGAANAVSCGSIEHKMGIKASATCVLNFDG 311 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGIL 349 G+L+G+ N + M L I + S A YAR R S G + Sbjct: 312 ASGWLIGEANKGLAAMFTMMNYERLSIGIQGIGCAENSYQNARTYARERIQSRSPAGPVA 371 Query: 350 IDQ--------PVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 D+ P ++R A+ + A+ LA D+ R A + Sbjct: 372 KDKIADPIIVHPDVRRMLLTMKAMTEGGRAFASYVGQQLDLAKFADQPHERHNAEALVAL 431 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 432 LTPVAKAFFTDTGLDSCVLGQQIFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLL 491 Query: 456 N 456 Sbjct: 492 G 492 >gi|71905738|ref|YP_283325.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] gi|71845359|gb|AAZ44855.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] Length = 378 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255 LTE G+D AAIT++ + D + L+G K F+++ M+ F + + G+ G C Sbjct: 123 LTEPHTGSDAAAITTRADRDGDH-FVLNGVKQFITTGKYAHMAIVFAVTDKAAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 FL+P G R ++K+G ++ TV++ F + LLG ++ Sbjct: 182 FLIPT-----DTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A S+ R + A+ YA+ R G +I+ + +AD+ + A Sbjct: 237 LEAGRIGI----ASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + +R A D K +EA+ A++ A + A + ++A++ GG GY + Sbjct: 293 ARLMVWRAAMLKDAGKPCLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRICQIYEGAND 365 >gi|169767448|ref|XP_001818195.1| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus oryzae RIB40] gi|238484315|ref|XP_002373396.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|83766050|dbj|BAE56193.1| unnamed protein product [Aspergillus oryzae] gi|220701446|gb|EED57784.1| acyl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 437 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K+SDG Y L+G K ++++ M S FI+ A ++ G + Sbjct: 178 LSEPASGSDAFALQTKAEKLSDG-YKLNGSKMWITNAMESGVFIVFANLDPSQGYKGITA 236 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + + G + + K+G R+++T L F + ++ N+ + K I L+ Sbjct: 237 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKSNLLGEEGQGYKYAISVLN 293 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373 + ++ LA A Y G LI M+ +A +IAAA AL Sbjct: 294 EGRIGIAAQMTGLALGAWENAARYVWNDRRQFGQLIGTFQGMQHQLAQAYTEIAAARALV 353 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEKM 406 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433 >gi|45361383|ref|NP_989269.1| short-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis] gi|39795787|gb|AAH64210.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus (Silurana) tropicalis] gi|89271279|emb|CAJ83244.1| acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Xenopus (Silurana) tropicalis] Length = 409 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 18/268 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A ++ K+ + L+G K W ++ + A ++LA + + + Sbjct: 149 FALSEPGNGSDAGAASTTA-KLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLKHKGI 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + GL + ++K+G R+++T L F + + N+ P KI + Sbjct: 208 SAFLVEMPTPGLSLGKKEDKLGIRASSTANLIFEDC---RIPRQNLLGQPGMGFKIAMQT 264 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + + +A + YA +R G + ++ +AD+AL + +A L Sbjct: 265 LDAGRIGIASQALGIGQAALDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLL 324 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D K ++EAA A++ A + A + +A++ +GG GY+ + R Sbjct: 325 TWRAAMMKDNKKPFTKEAAMAKLAA-------SEAATQISHQAIQILGGMGYVSDMPAER 377 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 HYR++ I G+ L + N L K Sbjct: 378 HYRDARITEIYEGTSEIQRLVIANQLLK 405 >gi|169797690|ref|YP_001715483.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|184156452|ref|YP_001844791.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213155516|ref|YP_002317561.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215485044|ref|YP_002327285.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|239503089|ref|ZP_04662399.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] gi|301347774|ref|ZP_07228515.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301511935|ref|ZP_07237172.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|301597247|ref|ZP_07242255.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|332853580|ref|ZP_08434832.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332869303|ref|ZP_08438701.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] gi|169150617|emb|CAM88526.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|183208046|gb|ACC55444.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213054676|gb|ACJ39578.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213987328|gb|ACJ57627.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|322506318|gb|ADX01772.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323516189|gb|ADX90570.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332728544|gb|EGJ59917.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332732811|gb|EGJ64026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|17508101|ref|NP_491859.1| Acyl CoA DeHydrogenase family member (acdh-3) [Caenorhabditis elegans] gi|13384503|gb|AAK21433.1| Hypothetical protein K06A5.6 [Caenorhabditis elegans] Length = 419 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 50/317 (15%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A ++ + T + + PKI + AIG L+E G+D A+ + Sbjct: 130 APLIIQLGTEEQKQKYLPKIVTE---------------AIGSFALSETGSGSDAFALKTT 174 Query: 218 GQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 +K D + +SG K W ++ + F++ A + G CFLV R E G+ Sbjct: 175 AKKDGDD-FVISGSKMWITNAGHAQFFLVFANADSAKGYKGITCFLVDRNQE-----GVS 228 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327 + ++K+G R+++T + F N +LG+ + K I L++ + + Sbjct: 229 VGKKEDKLGIRASSTCSVHFDNVRVHKSSILGEYG------KGYKYAIECLNAGRIGIGA 282 Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + LA+ I Y ++R G LID M+ I ++I AA L + A Sbjct: 283 QMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARMKQN 342 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 EAA A++ A ++A ++ +E +GG G+ +E + + YR+S +I Sbjct: 343 GLPFVREAAMAKLFA-------SQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTI 395 Query: 443 LLGSGNAMVLDVLNLLE 459 G+ N + + L++ Sbjct: 396 YEGTSNIQLNTIAKLVD 412 >gi|169780668|ref|XP_001824798.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus oryzae RIB40] gi|46430489|dbj|BAD16690.1| isovaleryl-coenzyme A dehydrogenase [Aspergillus oryzae] gi|83773538|dbj|BAE63665.1| unnamed protein product [Aspergillus oryzae] Length = 430 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 27/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +++ DG Y L+G K W + Sbjct: 143 NGSPEQKERFLPGLLSGDKIGALAMSEHSAGSDVVSMKTTAKEV-DGGYVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E + G + + + + +G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPQKGSKGITAFVVEKTFDGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG++N +K+L+ L+ ++S M+ +L + Y R G Sbjct: 262 PKENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ + A+ A ++ A D + S SE + + A Y + Sbjct: 316 PIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASLSEVSIRTQDCAGAILY-AAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413 >gi|228921051|ref|ZP_04084386.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838597|gb|EEM83903.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 26/284 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPADNVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 + R YR++ + I G+ L V +L K EQL T Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDT 419 >gi|254293966|ref|YP_003059989.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254042497|gb|ACT59292.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 382 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 43/293 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + K + PK+ S E+ + L ++E G+D+ + ++ +K+ DG Y Sbjct: 106 TDQQKKKYLPKLISGEHVGS-------------LAMSEAGAGSDVLGMVTKAEKV-DGGY 151 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 L+G K W ++P +D ++ A+ + V FL+ + E G + +K+G Sbjct: 152 LLNGTKFWITNAPEADTLVVYARTDPNNKNQGVTTFLIEKEFE-----GFSVSKKLDKLG 206 Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 R + T EL F SN G + G V ++ +++ L + + + ++ L Sbjct: 207 MRGSDTAELVFEDCFVPESNIMGEVHGGAKVLMSGLDYERVV--LSAGPLGI--IQACLD 262 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 I Y + R G + +++ IAD+ + + +A A ++ +A + D ++ +AA A Sbjct: 263 VCIPYVKDRKQFGKPIGSFQLVQAKIADMYVALNSARAYTYAVARACDAGQTTRFDAAGA 322 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++A + A EA++ +GG+GY++E + R R++ I G+ Sbjct: 323 ILLA-------SENAVKSSLEAIQTLGGAGYLKEWPVERFLRDAKLYDIGAGT 368 >gi|319760919|ref|YP_004124856.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330822823|ref|YP_004386126.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317115480|gb|ADU97968.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329308195|gb|AEB82610.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 385 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 43/284 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP W PK+ + E V LTE G+D A++ + D Y Sbjct: 102 TPEQQAQWLPKLATGE-------------VIASFALTEPEAGSDAASLRTTAILQGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K F++ +P + F ++A+ G V F+V D G+ + + K+ Sbjct: 148 VVNGTKRFITNAPHAGMFTLMARTNPQDKGAGGVSSFIV-----DAKSPGISFGKYDKKM 202 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G R T ++ F N L+G L G MK+L I++ A ++V + L Sbjct: 203 GQRGAHTCDVIFDNVKVPAANLIG-LKEGQGFKTAMKVLEKGRIHI--AAVAVGVAKRIL 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +A+ YA R G + + +++ +AD ++ AA ++ A D+ + S EA+ Sbjct: 260 RDALAYALERKQFGQPICEFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASC 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A++ A +M V A++ +GG+GY+ E I R YR+ Sbjct: 320 AKMFA-------TEMCGRVADRAVQILGGAGYMAEYGIERFYRD 356 >gi|294012375|ref|YP_003545835.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S] gi|292675705|dbj|BAI97223.1| isovaleryl-CoA dehydrogenase [Sphingobium japonicum UT26S] Length = 381 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 47/294 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ + L ++E G+D+ ++ + +K D Y Sbjct: 106 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEKRGD-RY 151 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++P +D ++ A+ EG G + L+E G Q++ +K+G R + Sbjct: 152 ILNGTKFWITNAPYADTLVVYAKTGEGARG--ITAFLIEKGFKGFSIGQKI-DKVGMRGS 208 Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-- 335 T EL F N G L G + V ++ LD +SG+++ + +A Sbjct: 209 PTAELVFDDCEVPEDNVMGPLNGGVGV---------LMSGLDYERAVLSGIQLGIMQACL 259 Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y R R G + +M+ +AD+ + + +A A + +A + D K+ +AA Sbjct: 260 DVVLPYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACDRGKTTRFDAAG 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A ++A + A V EA++ +GG+GY ++ + R+ R++ I G+ Sbjct: 320 AILLA-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLDIGAGT 366 >gi|255318694|ref|ZP_05359921.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262378125|ref|ZP_06071282.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255304192|gb|EET83382.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262299410|gb|EEY87322.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 375 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D + ++G K F++S + I++ + Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKNGDD-WIINGAKQFITSGNNAGVIIVFAI 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G F+VPR G R + K+G ++ T ++ +N +LG Sbjct: 170 TDPEAGKKGISAFIVPR-----ETQGYEVVRTEEKLGLHASDTCQIALTNVRVPNTLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 QQGEGLKIALSNLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGQPIFEHQAIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + K EA+ A K + +MA V + A+ Sbjct: 281 FRLASMATEIEAARQLVHHAARLKEAGKPCLNEASMA-------KLFSSEMAERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+++ I R YR++ I G+ + Sbjct: 334 QIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|229007037|ref|ZP_04164664.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides Rock1-4] gi|228754186|gb|EEM03604.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides Rock1-4] Length = 381 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 59/318 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W PK S E + +TE G+D+A+I + +K D Y Sbjct: 103 TEEQKKRWVPKCVSGE-------------CITAIAMTEPGAGSDLASIRTTARKEGD-YY 148 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ + +D I++ + + + G L+ +LE G ++LK KIG Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 S T EL F D+ V + E+ K YL + + V++A Sbjct: 206 LHSQDTAELIFE--------DVKVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKTAA 256 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSR 386 H++ + ++ ++I+D + FRLA + E A Sbjct: 257 EVMLHITKNYVQERKAFGKSISDF-------QTVQFRLAEMYTEIEIGRTFVDDCIANHM 309 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + E ++ + K+W +A V AE ++ GG GY+EE IAR YR+ P ++I G+ Sbjct: 310 NGENIVTKV--SMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAIYAGA 367 Query: 447 GNAMVLDVLNLLEKGTNL 464 M N++ KG L Sbjct: 368 NEIM----KNIIAKGMGL 381 >gi|229060001|ref|ZP_04197373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] gi|229167168|ref|ZP_04294909.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|228616206|gb|EEK73290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|228719318|gb|EEL70924.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] Length = 569 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENILG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|254516151|ref|ZP_05128211.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR5-3] gi|219675873|gb|EED32239.1| acyl-CoA dehydrogenase domain protein [gamma proteobacterium NOR5-3] Length = 669 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/341 (21%), Positives = 148/341 (43%), Gaps = 48/341 (14%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 LM P ++ + L +P + + PK+ S + T + LTE G Sbjct: 197 LMYPGLSHGCIKTLEAHGSPEQKQQYLPKLVSGNWTGT-------------MCLTESHCG 243 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFIMLAQV----EGRVGC--FL 257 +D+ + ++ + +DG Y ++G K F+S+ MSD I++A++ EG G F+ Sbjct: 244 SDLGLLRTKAEPQADGSYAITGTKIFISAGEHDMSDNIVHIVIARMPDAPEGTKGISLFV 303 Query: 258 VPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ + EDGS NG+ ++ K+G +++AT + F G+L+G+ N + Sbjct: 304 VPKFNVNEDGSIGERNGVHCASIEKKMGIKASATCVMNFDGAKGYLIGEPNRGLNMMFTF 363 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIA 360 + +AI ++ ++ ++ YAR R + +I P ++R + Sbjct: 364 MNTARIGTAIQGLAHAELAYQGSLEYARERLAMRSLTGPKNPDGPADPIIVHPDVRRMLL 423 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEA 415 + A+ + LA D + EE+A ++ PI K + + Sbjct: 424 TQKSIAEGSRAMLYYLAQLGDIVERGDEESAKKADDLMALLTPIAKAFVTEAGLEAANHG 483 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + + R++ ++ G+ LD++ Sbjct: 484 IQIYGGHGFIREWGMEQIARDARIATLYEGTTGIQALDLIG 524 >gi|153000023|ref|YP_001365704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS185] gi|160874644|ref|YP_001553960.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS195] gi|304409611|ref|ZP_07391231.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|307303969|ref|ZP_07583722.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] gi|151364641|gb|ABS07641.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185] gi|160860166|gb|ABX48700.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195] gi|304352129|gb|EFM16527.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|306912867|gb|EFN43290.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] gi|315266886|gb|ADT93739.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS678] Length = 385 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ Q + + DG Y +SG K F+S + +++ G+ G + Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y + ++K+G + T ++ F N LLG+ G MK L Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + R Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA +F S E AY + K + + V A++ GG GYI E + RH+R Sbjct: 299 LA-AFKLDSSDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|6942167|gb|AAF32336.1|AF218939_4 acyl-CoA dehydrogenase [Bacillus subtilis] Length = 370 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 29/268 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCF 256 GLTE G+D +Q + + DG Y ++G K ++++ +++ V G+ G Sbjct: 113 FGLTEPNAGSDAGG--TQTKAVIDGDEYVINGEKCWITNASYARTVIVTAVTGKNESGNN 170 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++ L+ GL +K+G R + T E+ + +LLGD P + K Sbjct: 171 IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVHASYLLGD------PSKGFK 224 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD +S++ + V +A+A + YA+ R G + ++ +AD+A++I Sbjct: 225 QFLHTLDGGRISIAALAVGIAQAALEASLAYAKERKQFGQPISSFQAIQFKLADMAMEID 284 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + A D + ++EAAYA++ A +MA +A++ GSGY+ E Sbjct: 285 LARQMVLKAAWLKDHKRPFTKEAAYAKLFA-------SEMATRACNQAIQIHAGSGYMRE 337 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455 ++ R R+ A + +G G + + ++ Sbjct: 338 YAVERMLRD--AKLMEIGEGTSEIQRIV 363 >gi|282866161|ref|ZP_06275208.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] gi|282558945|gb|EFB64500.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] Length = 390 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVG--CF 256 L+E G+D A++ ++ + D + L+G K W ++D +LA+ VEG G F Sbjct: 133 LSEPASGSDAASLRTKAVRDGDD-WVLTGTKAWITHGGIADFCTVLARTGVEGPRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G GL + K+G + + T +L F G +GD + I L Sbjct: 192 LVP-----GDAEGLGAAPPEKKMGMKGSPTAQLHFD---GVRIGDDRRIGDEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ V +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDSGRLGIAACAVGVAQAALDEAVGYATGRRQFGRPVADFQGLRFMLADMATRIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D S +AA A K +C +A V +A++ +GG GY + + Sbjct: 304 ALYLEAARLRDAGLPFSRQAAMA-------KLFCTDVAMQVTTDAVQVLGGYGYTLDFPV 356 Query: 431 ARHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 357 ERLMREAKVLQIVEGT 372 >gi|288959960|ref|YP_003450300.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] gi|288912268|dbj|BAI73756.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] Length = 377 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 PM + + LTE + G+D +AI ++ ++ D + L G K F++S +D I+ A Sbjct: 111 PMARGEMLGAFCLTEPQAGSDASAIRTRARRDGDH-WVLDGTKQFITSGSQADVAIVFAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL- 302 + G F+VP G R + K+G + T ++ F + + GDL Sbjct: 170 TDPAAGKKGLSAFIVPT-----DTPGYQVARTEEKLGQHCSDTCQILFEDCR--VPGDLM 222 Query: 303 --------NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 V+ +E +I I A +V R +L A+ YA+ R G +I Sbjct: 223 LGAEGAGYKVALANLEGGRIGI----ASQAVGMARAALDHAVRYAQERQSMGVPIIQHQA 278 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A + AA L A+ D +EAA A++ A +MA V ++ Sbjct: 279 VAFRLADMATKVEAARQLVLHAASLRDAGVPCMKEAAMAKLFAS-------EMAEKVCSD 331 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A++ GG GY+ + + R YR+ I G+ + Sbjct: 332 AIQIHGGYGYLNDFPVERIYRDVRVCQIYEGTSD 365 >gi|110834633|ref|YP_693492.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110647744|emb|CAL17220.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 380 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 19/260 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + Q + + DG Y ++G K F++S + + +A G G + Sbjct: 125 LAITEPNGGSDVANL--QTRAVRDGDHYVVNGAKTFITSGVRADYYTVAVRTGDKGYGGI 182 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 LL E G+P ++LK K+G ++ T EL F + L+G N + Sbjct: 183 SLLLIEKGTPGFTVGRKLK-KMGWWASDTAELFFEDCRVPAENLIGPENGGFYCIMSNFQ 241 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + L A+ + S +++L EA+ Y + R G L V + +A++A D+ A+T ++ Sbjct: 242 MERLVLAVTANSTAQLALDEALRYVKEREAFGRPLAGFQVTRHKLAEMATDVKASTEFTY 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R+A ++ + + A+ +A + A V +A++ GGSGY+ + R + Sbjct: 302 RVAAKIAAGENCVLDVSMAKNVA-------TRCADRVTYDAVQLFGGSGYMRGTVVERLF 354 Query: 435 RESPANSIL-LGSGNAMVLD 453 R+ N IL +G G +++ Sbjct: 355 RD---NRILSIGGGTHEIMN 371 >gi|84623614|ref|YP_450986.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367554|dbj|BAE68712.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 393 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ +L V E + + Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFAD---YLAQPDEVLGVEGEGFRTAMSV 250 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + ++ EAA A++ A W + +A++ GG GY +E + R Sbjct: 311 TLRAAWLKGQRQTFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 364 YFRDAKITEIYEGT 377 >gi|328877386|pdb|3R7K|A Chain A, Crystal Structure Of A Probable Acyl Coa Dehydrogenase From Mycobacterium Abscessus Atcc 19977 DSM 44196 gi|328877387|pdb|3R7K|B Chain B, Crystal Structure Of A Probable Acyl Coa Dehydrogenase From Mycobacterium Abscessus Atcc 19977 DSM 44196 gi|328877388|pdb|3R7K|C Chain C, Crystal Structure Of A Probable Acyl Coa Dehydrogenase From Mycobacterium Abscessus Atcc 19977 DSM 44196 gi|328877389|pdb|3R7K|D Chain D, Crystal Structure Of A Probable Acyl Coa Dehydrogenase From Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 403 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 20/289 (6%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 S V +A + P + + + + R PT M + LG+TE G+D+A Sbjct: 106 STGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGS-----LGVTEPGAGSDVA 160 Query: 213 AITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + ++ + D Y ++G K F++S + F+ A G G V L+ D + G Sbjct: 161 NLRTRAVREGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEV 219 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 R +K+G R + T EL F + L+G N +G ++ M+ L A+ + + Sbjct: 220 SRRLDKMGWRCSDTAELSFVDVRVPADNLVGAEN--SGFLQIMQQFQAERLGIAVQAYAT 277 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +L A +AR R G L + +++ +A++A + A + + + + Sbjct: 278 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 337 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E + MA T + C V+ EA++ GG GY+ E I RHYR+ Sbjct: 338 AEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEIERHYRD 379 >gi|320168731|gb|EFW45630.1| isovaleryl-CoA dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 427 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + R G V Sbjct: 165 LAMSEPGSGSDVVSMQLRAEKKGD-KYVLNGNKFWITNGPDADVLVVYAKTDVRGGSKGV 223 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G +K G R + T EL F + + NV G + + +L+ Sbjct: 224 TAFLVEKGFKGFTTGPKLDKFGMRGSNTCELIFEDC---EIPAENVMGGVGKGVYVLMSG 280 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++G M+ +L AI YA R G + + +M+ +AD+ +A++ + Sbjct: 281 LDYERLVLAGGSTGLMQAALDIAIPYAHTRKQFGQKIGEFQLMQGKLADMYTKLASSRSF 340 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A + D + ++ A ++ C + A V EA++ +GG+GYI E R Sbjct: 341 LYAAARAADRGEIDGKDCAAVILL-------CAENATQVCLEALQTLGGNGYINEYDTGR 393 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 394 LVRDAKLYEIGAGT 407 >gi|320158804|ref|YP_004191182.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O] gi|319934116|gb|ADV88979.1| branched-chain acyl-CoA dehydrogenase [Vibrio vulnificus MO6-24/O] Length = 384 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 45/365 (12%) Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164 + ++WD + F PV V K+A ++ LY M++L+A + S+ S A Sbjct: 27 NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 86 Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 MT +H +W F ++E + ++ LTE G+D A++ + + Sbjct: 87 MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGTLLGSYCLTEPNSGSDAASLKTTATRQ 143 Query: 222 SDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLK 276 D Y ++G K F+S + + +++A+ G V F+VP G+ Y R + Sbjct: 144 GDE-YRINGAKAFISGAGETQVLVVMARTGGEGAKGVSAFVVP-----ADAQGVSYGRKE 197 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMR 329 K+G S T + F N LG+ + ++ +I I A SV + Sbjct: 198 PKMGWNSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQ 253 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L A Y + R G L + ++ +AD+A ++ AA L A+ D K + Sbjct: 254 QALNLATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFAASKLD--KGDPDA 311 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AY + K + + V EA++ GG GYI+E + R +R+ + IL G+ Sbjct: 312 TAYC----AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEI 367 Query: 450 MVLDV 454 M L V Sbjct: 368 MRLIV 372 >gi|330984630|gb|EGH82733.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D PV +++A + A D+ + F + + +R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|289670333|ref|ZP_06491408.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 393 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 191 FVVPADAPGITYGRKEEKMGWNSQPTRGVTFENV---RIPAENLLGKECEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|149469715|ref|XP_001519538.1| PREDICTED: similar to acyl-CoA dehydrogenase, short-chain-specific [Ornithorhynchus anatinus] Length = 350 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 92 LSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWDASATVVFATTDKALKHKGITA 150 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 FLVP GL + ++K+G R+++T L F + LG+ P + Sbjct: 151 FLVPM-----PTPGLSLGKKEDKLGIRASSTANLIFEDCRIPRHHALGE------PGQGF 199 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+A + YA +R G L ++ +AD+AL + Sbjct: 200 KIAMQTLDMGRIGIASQALGIAQAALDCAVDYAEKRMAFGAPLTKLQGIQFKLADMALAL 259 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K +EAA A++ A + A ++ +A++ +GG GY+ Sbjct: 260 ESARLLTWRAAMLKDNGKPYGKEAAMAKLAA-------SEAATSIAHQAIQVLGGMGYVT 312 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 313 EMPAERHYRDARITEIYEGT 332 >gi|152985952|ref|YP_001351247.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961110|gb|ABR83135.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 596 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 59/327 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEPRADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLE--DGS---PNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + DGS N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLPDAPAGVKG-ISLFLVPKFIARPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +AA Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLAAC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456 + + R+S I G+ LD+++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLVH 450 >gi|145225179|ref|YP_001135857.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145217665|gb|ABP47069.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 381 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 16/268 (5%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P T +G + +TE G+D+ ++T++ ++ D Y ++G K F+++ +D I++A Sbjct: 115 PRLATGEMVGAIAMTEPGTGSDLQSVTTKASRVGDE-YVVNGSKTFITNGAQADLIIVVA 173 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 + + G + +L +G G R+ +K+G R T EL F + LLG Sbjct: 174 KTDPSAGANGISLVLVEGDRPGFRRGRVLDKVGQRGQDTSELYFEDVHIPVENLLGTTE- 232 Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G ++ M+ L L A+ +V+ + +L + Y + RH G + K +A++ Sbjct: 233 GQGFIQLMQQLPQERLILALGAVTVLETALEFTVEYTKDRHAFGKPVFAFQNTKFKLAEV 292 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D + D+ +R + K+W + A + + ++ GG Sbjct: 293 ATDAHISRVF-------IDDCVARHLRGELDIPTVAMAKWWTTERAMVALDDCLQLHGGY 345 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E I R + ++ I G+ M Sbjct: 346 GYMTEYPIGRMWADARVQKIYGGTNEIM 373 >gi|307295790|ref|ZP_07575623.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306878446|gb|EFN09667.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 592 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 57/338 (16%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ S E+ T + LTE GTD+ I ++ DG Y ++G K F+ Sbjct: 150 PKLISGEWSGT-------------MCLTESHSGTDLGLIKTRAVPAKDGSYAITGGKIFI 196 Query: 236 SS---PMSDAFIMLA---------QVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNK 278 S+ M D + L V G + FLVP+ L E+G+P NG+ +++K Sbjct: 197 SAGEHEMVDNIVHLVLAKLPDAPPGVRG-ISLFLVPKYLPDENGAPGARNGVSAGSIEHK 255 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-------RVS 331 +G + + F + G+L+G+ + + M ++ ++ ++S G + S Sbjct: 256 MGMKGAVACVMNFEDATGWLVGEPHRG---LHAMFTMMNVERLLLSAQGQGAAELAYQSS 312 Query: 332 LAEAIHYARRRHVSGG--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 LA A + R +SG +I P ++R + + AL+ + D A Sbjct: 313 LAYARDRVQGRALSGAKYPTLAADPIIVHPDVRRMLLTMKAHAEGGRALALWVMKHVDIA 372 Query: 384 K------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + R + + +M P+ K W ++ GG GYI E + + R+ Sbjct: 373 ERHPDPAEREKASDLVALMTPVVKVWLSDNGSEAANLGVQTFGGHGYIREWGMEQIVRDI 432 Query: 438 PANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLE 473 + G+ LD++ L KG +L +L ++ Sbjct: 433 RILQLYEGANGIQALDLVARKLPMKGGSLLLRLTDPID 470 >gi|325955394|ref|YP_004239054.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922] gi|323438012|gb|ADX68476.1| Butyryl-CoA dehydrogenase [Weeksella virosa DSM 16922] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA 247 P+ K L+E G+D A + + I G Y L+G K W + + +I++A Sbjct: 113 PLAKGEKIGAFCLSEPDAGSD--ATSQKTTAIDKGDYYLLNGTKNWITNGGTASTYIVIA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------F 295 Q G + + + G + K+G R + T L F++ F Sbjct: 171 QTHEEKGHRGINAFIVEKGWEGFEIGPKEQKMGIRGSDTHSLFFNDVKVPKENRIGEDGF 230 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 GF +NV G I + S + ++ LA + YA+ R G +I+ + Sbjct: 231 GFKFA-MNVLNGG------RIGIASQALGIAQGAYELA--LEYAKIRKAFGTEIINHQGV 281 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A +I AA L + A DE K SE A A++ A T W V EA Sbjct: 282 AFKLADMATNITAARMLCLKAAVEKDEGKDISESGAMAKLFASTTAMW-------VTTEA 334 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 ++ GG+GY+ E + R R++ I G+ + + + KG Sbjct: 335 VQIHGGNGYVREYHVERMMRDAKITQIYEGTSEIQKIVISRSIAKG 380 >gi|257482485|ref|ZP_05636526.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/353 (22%), Positives = 147/353 (41%), Gaps = 66/353 (18%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D PV +++A + A D+ + F + + +R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 LD+L L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|239983225|ref|ZP_04705749.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces albus J1074] gi|291455056|ref|ZP_06594446.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces albus J1074] gi|291358005|gb|EFE84907.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces albus J1074] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 34/262 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 ++E G+DI+A+ +G+ DG Y L G K W + +D + + + GR G + Sbjct: 124 ISEAEAGSDISAMACRGRAHPDGSAYTLDGAKAWTSHAGQADYYNIFCRT-GRAGVRGLS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSN--ATVELEFSNTF----------GFLLGDLNVSTG 307 LL + GL R + K+G RS+ ATV L+ + GFL ++TG Sbjct: 183 VLLAPATTRGLTTGRPERKMGVRSSPTATVTLDGAEVAADRMIGRPGKGFL-----IATG 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + ++ I A +V +L +A+ YAR+ SGG ID + +AD++ +A Sbjct: 238 LFDRGRLGI----AACAVGLATAALDQAVSYARKPRSSGGPAIDSQGLAFLLADLSTQVA 293 Query: 368 AATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA AL A + D S EAA A++ A T A V +AM+ +G Sbjct: 294 AARALVREAARTLDSGVRDSVVTAEAARAKLFATDT-------AMRVTTDAMQALGAHSA 346 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ R RE+ I+ G+ Sbjct: 347 GQDHPAERWMREAKLLQIIEGT 368 >gi|297201058|ref|ZP_06918455.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197712157|gb|EDY56191.1| acyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 608 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ L D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399 P ++R++ AL A DE + + + E A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTAAVQDEIQVKEAAGEDVTTENALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + A ++A++++ GGSG+++E I ++ R+S +++ G+ Sbjct: 401 VKGYGSEKAYELLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447 >gi|322420195|ref|YP_004199418.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] gi|320126582|gb|ADW14142.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 31/265 (11%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---- 250 VA LTE G+D A +++ ++ D + L+G K F++S P + F++ A + Sbjct: 121 VAGSFALTEAGAGSDTAGMSTSARRDGD-RWVLNGAKAFITSAPYAGVFVVWAVTDREAP 179 Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303 + CFLV E G+P GL R + K G R++AT + F L+G+LN Sbjct: 180 RGSGISCFLV----EPGTP-GLVIGREEEKTGQRASATCSVSFEECRIPVDALVGELNRG 234 Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 V+ G + +I I +++ +L A YA +R G + + ++ IAD Sbjct: 235 YRVAVGELAGGRIGI----GSLALGVGLAALDFATGYASQRRQFGQKICNFQAIRWMIAD 290 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 ++ AA L + A D + ++EA+ A++ A C A++ +GG Sbjct: 291 AYTELEAARLLLMQAAYLKDAGRPFAKEASMAKLFATEAANRACY-------SAVQILGG 343 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GYI + + R+ R+ SI G+ Sbjct: 344 YGYIADFPVERYARDVRVTSIYEGT 368 >gi|229011604|ref|ZP_04168788.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] gi|228749668|gb|EEL99509.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] Length = 575 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 132 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 177 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 178 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 234 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + +++ ++ Sbjct: 235 TATLILEDVVIPAENILG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAISLSV 288 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 289 QYGKERKQFQTELVDFTMIQEKIANMIISTYGAESAAYRTAGVIDEAIHESDEDLMKKMS 348 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 349 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 408 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 409 LTVAKMLMK 417 >gi|228472001|ref|ZP_04056769.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624] gi|228276613|gb|EEK15326.1| acyl-CoA dehydrogenase [Capnocytophaga gingivalis ATCC 33624] Length = 377 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 43/296 (14%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K W PK+ S E+ IG G+TE G+D + + K + + L+G Sbjct: 108 KRWLPKLASGEH--------------IGAWGITEHNTGSDAGGMLTTAVKQGEE-WVLNG 152 Query: 231 HKWFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K F++ +S +++ G G + ++E G+P G + +K+G R++ T E Sbjct: 153 TKNFITHAISADVVVVIARTGEKGDKHGMTAFVVERGTP-GFSNGKKIDKLGMRASETAE 211 Query: 289 LEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYA 339 L F N + D N V G ++ MKIL D +S+ + + A+ AI YA Sbjct: 212 LVFQNC---RIPDQNRIGAVGEGFIQAMKIL---DGGRISIGALSLGTAKGAVKAAIQYA 265 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G +I + +A+++ +I AA + + A+ + + +++AA A++ A Sbjct: 266 KERSQFGKPIISFQAIGFKLAELSTEIEAAELMLHKAAHLKETHQPVTQQAAMAKLYAS- 324 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 C K + EA++ GG GY + + + YR++ +I G G + +L ++ Sbjct: 325 --ELCVKASN----EAIQIHGGYGYTTDYPVEKFYRDAKLCTI--GEGTSEILKLV 372 >gi|224072021|ref|XP_002199716.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Taeniopygia guttata] Length = 412 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTMARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 211 SAFLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDC---RIPKANLLGQPGMGFK 262 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA +R G + ++ +AD+A+ + Sbjct: 263 IAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFKLADMAVALE 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L++R A D K ++EAA A++ A + A ++ +A++ +GG GY+ E Sbjct: 323 GARLLTWRAAMLKDNGKPFTKEAAMAKLAA-------SEAATSIAHKAIQILGGMGYVTE 375 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 RHYR++ I G+ L + L K Sbjct: 376 MPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 408 >gi|239820039|ref|YP_002947224.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239804892|gb|ACS21958.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 592 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 56/321 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI S E+ T + LTE GTD+ + ++ DG Y ++G K Sbjct: 149 YLPKIASGEWAGT-------------MCLTEPNAGTDLGLMRTRAVAQPDGSYSITGSKI 195 Query: 234 FLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLEDGSPNG-----LCYQRLK 276 F+S D ++LA+ V+G + F+VP+ + D + + ++ Sbjct: 196 FISGGEQDLTENIMHLVLARMPDAPPGVKG-ISLFIVPKFIPDANGAAGARNAVVCGSIE 254 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTG----PVEDMKILIYLDSAIMSVSGMRVSL 332 +K+G N+T + F G+LLG + + M++L+ ++++ M + Sbjct: 255 HKLGIHGNSTCTINFDGATGWLLGAPHKGLAGMFVQMNHMRVLV----GMIAIGLMEAAY 310 Query: 333 AEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 +A+ YA+ R I +I ++R + +I A AL+ + D Sbjct: 311 QKALAYAKERLQGRAIGARPSGDAVDPIIGHADVRRMLLTQKANIEGARALALWTSQLSD 370 Query: 382 ------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + R+E A ++ P+ K +A AM+ GG GYI E + +H R Sbjct: 371 VQRLHPDPAKRNETAELLGLLTPLVKALSSDLAVECTLLAMQVFGGHGYIRENGVEQHLR 430 Query: 436 ESPANSILLGSGNAMVLDVLN 456 + + G+ +D+L Sbjct: 431 DVRIVGLYEGTNGVQAMDLLG 451 >gi|86360546|ref|YP_472434.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86284648|gb|ABC93707.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 395 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 24/252 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W ++P++D F++ A Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWA 185 Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + E G + F +LE G GL + K+G R++ T E+ F + + N+ Sbjct: 186 KTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLP 237 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 G L+SA ++ + AE A Y R G L ++++ +AD Sbjct: 238 GVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYVLERKQFGRPLAANQLIQKKLAD 297 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +IA RL +E E + I K C A + A + +GG Sbjct: 298 MAAEIALGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEMARAARDMLGG 350 Query: 422 SGYIEERSIARH 433 +G +E IARH Sbjct: 351 NGISDEFGIARH 362 >gi|78043397|ref|YP_360564.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77995512|gb|ABB14411.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus hydrogenoformans Z-2901] Length = 384 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC--FLV 258 LTE G+D A+I + K D Y L+G K F+++ P +D F ++A + G + Sbjct: 126 LTEPEAGSDAASIRTTAVKKGDR-YILNGVKHFITNGPDADVFTIIAVTDKSKGAKGGIT 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 ++E P G ++ K+G R + T E+ N G NV G + Sbjct: 185 AFIVEKNFP-GFKVGTIEKKMGLRGSHTSEIILEDCEVPEENVLG------NVGEGYINA 237 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +KIL + A V M+ L + YA++R G + ++ +A++A+DI A Sbjct: 238 LKILAKGRVGLAARCVGSMQKLLELSTRYAQQRVQFGKPISSFQAIQHMLAEMAVDIEAT 297 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++R+A D+ +EAA ++ A + V+ +A++ GG GY++E Sbjct: 298 RWFAYRVAWLVDQGAKVIKEAAAVKLFA-------SEAYGRVVDKAVQIFGGMGYMKEFP 350 Query: 430 IARHYRESPANSILLGS 446 I R+YR++ I G+ Sbjct: 351 IERYYRDARITRIYEGT 367 >gi|299536306|ref|ZP_07049619.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis ZC1] gi|298728292|gb|EFI68854.1| butyryl-CoA dehydrogenase-like protein [Lysinibacillus fusiformis ZC1] Length = 594 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 59/363 (16%) Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 S+T + V + + P V K + PK+ S E + LTE Sbjct: 109 SITHGAHVGIGSLPIVLFGNEDQKKKYLPKLASGE-------------LIAAYALTEPGS 155 Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264 G+D + A T+ + Y L+G K W ++ +D F++ A+++G + F+V R Sbjct: 156 GSDALGAKTTAKLNEAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFSAFIVER---- 211 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319 + NG+ + K+G +S++T L + LLG+ + G + IL Sbjct: 212 -AYNGVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHIIAFNILNIGRYK 268 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + ++ G + +L AI Y +R L D + K ++ +A + A+ +L++R Sbjct: 269 LGVGTIGGSKRALELAIQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGL 328 Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 F++ S+ EE +++A I K + + + EA++ GG G++ E Sbjct: 329 FEDRLSQLSLEEQKQGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388 Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475 + R YR+S N I G+ N M++ L LL+ NL ++L + ++ Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPEE 448 Query: 476 LGS 478 +G+ Sbjct: 449 IGT 451 >gi|228991347|ref|ZP_04151304.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228768410|gb|EEM17016.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 571 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 52/356 (14%) Query: 149 GHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTNKAPMQKTSVAIG-L 200 G+ + SV+ V + T P ++ + + PKI S E+ IG Sbjct: 101 GYAGAFSVSFNIHVGVGTLPYIYYGTNEQKEKYLPKIASGEW--------------IGAY 146 Query: 201 GLTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 147 ALTEPNAGSDALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313 R E G GL +++ I S AT+ LE N G V G + Sbjct: 207 ERTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPVENVLG------EVGKGHYVALN 257 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 IL + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 258 ILNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAES 317 Query: 372 LSFRLANSFDEAKSRSE-EAAYARIMAP------ITKYWCCKMAPAVIAEAMECIGGSGY 424 ++R A DEA + + + R M+ I K + ++ EA++ GG GY Sbjct: 318 AAYRTAGVIDEAIHETNGDGSIMRKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGY 377 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475 ++E + R YR++ + I G+ L V +L K G + E F +E++ Sbjct: 378 MQEYEVERLYRDARISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433 >gi|258511563|ref|YP_003184997.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478289|gb|ACV58608.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 593 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 47/275 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + + DG Y L+G K ++++ +D F++ A+V+G+ F+V Sbjct: 148 LTEPNSGSDALSARTTAKLSEDGKYYILNGTKQYITNAGFADVFVVYAKVDGQHFSAFIV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R + G+ + + K+G + ++T ++ +L D+ V PVE++ + Sbjct: 208 ERTMP-----GVSFGPEEQKMGIKGSSTRQV--------ILEDVKV---PVENLLFEVGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I ++ G +V+L + YA R G L + P+++R +A + Sbjct: 252 GHQIAFNILNIGRFKLGAGALGGSKVALETSAKYANERKQFGKKLSEFPLIQRKLARMNT 311 Query: 365 DIAAATALSFRLANSFDE-------------AKSRSEEAAYARIMAPITKYWCCKMAPAV 411 I A ++ +R A D +S A YA I I K + ++ V Sbjct: 312 QIYALESVVYRTAGLLDAILETVDVTKPDSGVQSAKAIAEYA-IECSINKVFGSEVLDFV 370 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + EA++ GG+G+I+E + + YR++ N I G+ Sbjct: 371 VDEAVQIHGGAGFIKEYGVEQMYRDARINRIFEGT 405 >gi|294665598|ref|ZP_06730878.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604647|gb|EFF48018.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 393 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 250 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 311 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 364 YFRDAKITEIYEGT 377 >gi|187922622|ref|YP_001894264.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187713816|gb|ACD15040.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 387 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 53/307 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +V TP + PK + E+ G+GLTE GTD+ AI + Sbjct: 97 AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271 +++ D Y ++G+K W +S + +L + + PR LL P G Sbjct: 144 KRVGDE-YIVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHLGMSLLLVQKGP-GFE 197 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324 R K+G + T EL F D +VST G VE +IL L+ ++ Sbjct: 198 VSRQLEKLGYKGIDTCELSFH--------DYHVSTDALIGGVEGRGLQQILGGLELGRIN 249 Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 V+ V +A E++ Y+++R G + + ++ + ++A + A L A Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAKK 309 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D + EA A KY+ + A EAM G GY +E ++ R YR++P Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSVEAMRIHGAYGYSKEYNVERLYRDAPL 362 Query: 440 NSILLGS 446 +I G+ Sbjct: 363 LTIGEGT 369 >gi|78047161|ref|YP_363336.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035591|emb|CAJ23258.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 183 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|297564550|ref|YP_003683522.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus silvanus DSM 9946] gi|296848999|gb|ADH62014.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM 9946] Length = 394 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 41/279 (14%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 GLTE G+D AA+ ++ Q+ +G + ++G K F++ ++ +++ A+ + P Sbjct: 132 GLTEPGSGSDAAAMRTRAQETPEG-FVINGSKQFITQGSVAGVYVINARTD--------P 182 Query: 260 RLLED------------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 ED G GL R + K+G S+ T +L F + L V Sbjct: 183 APSEDKKHLGLSAFVFYGPVEGLRIGRKEEKLGLHSSDTAQLLFEDLHLEKDALLGVRGK 242 Query: 308 PVEDMKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 D +L LD A +SV R +L A YA R G + + + +A++ Sbjct: 243 GFYD--VLRVLDGGRIGIAALSVGLGRAALEFAAKYALEREQFGKPIAEFQGVSFKLAEM 300 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ AA L R A D + S EAA A++ A C EA++ +GG Sbjct: 301 ATNLEAARLLYLRAAELKDAGRPFSGEAAQAKMFASEVAVRACD-------EAIQILGGY 353 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLL 458 GYI+E + R++R+ A + +G G VL V+ NLL Sbjct: 354 GYIKEYPVERYWRD--ARLMRIGEGTTEVLKVIIARNLL 390 >gi|110833849|ref|YP_692708.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110646960|emb|CAL16436.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 22/272 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP + + ++E G+D+AA+ + K D Y ++G K W +SP +D F +LA Sbjct: 112 APAIAGDMVASIAVSEPHAGSDVAAVKTTAVKDGDD-YVINGTKMWITNSPSADFFCLLA 170 Query: 248 QV-EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 +G+ +VP+ G+ + NK+G R + T ++ F N L+ Sbjct: 171 NTSDGKPHVNKSLIVVPK-----DAGGITVDKPLNKLGMRCSETAQVFFDNVRVPQRNLI 225 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G + L +A S+ GM + E I YA+ R + G LID + + Sbjct: 226 GQEGMGFMMQMMQFQEERLFAAANSLKGMEHVIDETIAYAKDRKIFGMPLIDNQSVHFRL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++ + AL++R + K + A+ A++ +++ V ++ Sbjct: 286 AELQSEVESLRALTYRACEMYVNGKDVLQLASMAKLK-------VGRLSREVADSCLQYW 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG+G++ E + +R+ SI G+ M+ Sbjct: 339 GGNGFMWENPAGQLFRDGRLGSIGGGADEIML 370 >gi|83648023|ref|YP_436458.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636066|gb|ABC32033.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 599 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 50/328 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE G+D+ + S+ + +DG Y ++G K Sbjct: 150 YLPKLVSGEWTGT-------------MCLTEPHCGSDLGILRSKAEPNADGSYSITGTKI 196 Query: 234 FLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL--EDGS---PNGLCYQRLKN 277 F+S+ D I LA++ +G G F+VP+ L EDGS N + +++ Sbjct: 197 FISAGEHDMAENIVHICLARLPDAPQGTKGISLFIVPKFLVNEDGSLGERNSVTCGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G N+T + F G+L+G N + L +AI +S +S A+ Sbjct: 257 KMGIHGNSTCVMNFDGAKGYLIGPENKGLACMFTFMNFARLGTAIQGLSASELSFQGALT 316 Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381 YA+ R +SG +I P ++R + + AL + A D Sbjct: 317 YAKDRLAMRSLSGVKNPNGPADPIIVHPDVRRMLLTQKAFTEGSRALIYYTAVQGDFVHH 376 Query: 382 --EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + R+E + PI K + ++ M+ GG G+I E + + R++ Sbjct: 377 GATEEVRNEADELMGFLTPIAKAFLTEIGYESANLGMQVYGGHGFISEWGMEQIVRDTRI 436 Query: 440 NSILLGSGNAMVLDVLN---LLEKGTNL 464 + G+ LD+L L+ +G +L Sbjct: 437 ALMYEGTTGIQALDLLGRKILMTQGESL 464 >gi|302533278|ref|ZP_07285620.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] gi|302442173|gb|EFL13989.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] Length = 390 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A++T++ + D + ++G K W ++D + +LA+ G G + Sbjct: 133 LSEPAAGSDAASLTTKAVRDGD-EWVITGTKAWITHGGVADFYTVLART-GAPGAKGITA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 L G GL + K+G + + T +L F G + D + I L LD Sbjct: 191 FLVPGDAPGLTAAVPEKKMGMKGSPTAQLHFD---GVRVPDSRRIGEEGQGFTIALAALD 247 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ + +A EA+ YA R G + D ++ +AD+A I A AL Sbjct: 248 AGRLGIAACAIGVAQAALDEAVSYALGRKQFGHPIADFQGLRFMLADMATKIEAGRALYL 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D K S +AA A K +C A AV +A++ +GG GY + + R Sbjct: 308 AAARLRDAGKPFSRQAAMA-------KLFCTDAAMAVTTDAVQILGGYGYTADFPVERLM 360 Query: 435 RESPANSILLGS 446 RE+ I+ G+ Sbjct: 361 REAKVLQIVEGT 372 >gi|187927802|ref|YP_001898289.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|187724692|gb|ACD25857.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] Length = 397 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPASMITRARKV-DGGYSLSGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351 + + N+ G L+SA ++ + AEA + R++V G L Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAA 290 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 NQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365 >gi|329939155|ref|ZP_08288529.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] gi|329302040|gb|EGG45933.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] Length = 383 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 53/306 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +A + + W P + + EY + GLTE G+D +T++ Sbjct: 95 AKTIAAWGSEEQKRHWLPGLVAGEYVGS-------------FGLTEPGTGSDAGNLTTRA 141 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272 + G + L+G K F+++ +D ++ A+ G FLVP SP GL Sbjct: 142 VR-EGGDHVLNGTKTFITNGTWADVILLFARSTDAPGHKGVTAFLVPA----DSP-GLTR 195 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSV 325 + + K+G R AT EL +L D+ V GP E + + + MSV Sbjct: 196 RTIHGKLGLRGQATAEL--------VLQDVRVPASAMLGP-EGKGFSVAMSALAKGRMSV 246 Query: 326 SGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ Sbjct: 247 AAGCVGIAQAALDAAVRYAGEREQFGKPIARHQLVQELISDIAVDVDAARLLTWRVADLV 306 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + EA+ A++ A + A A++ GG GYI+E + + R++ Sbjct: 307 DRGLPFATEASKAKLFA-------SEAAVRSANNALQVFGGYGYIDEYPVGKLLRDARVM 359 Query: 441 SILLGS 446 ++ G+ Sbjct: 360 TLYEGT 365 >gi|297624543|ref|YP_003705977.1| acyl-CoA dehydrogenase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165723|gb|ADI15434.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM 17093] Length = 381 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 48/267 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D AAIT++ +K+ G Y LSG K W S + ++++A+ + G C Sbjct: 125 LSEPHAGSDAAAITTRARKVEGG-YVLSGTKAWITSGGEAQVYLVMAKTDPSAGPRGVSC 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V + G+P G+ + + + K+G + T + F + F G L+G + Sbjct: 184 FVV----DKGTP-GMHFGKPEEKLGQHAATTTSVIFEDCFVPDGALVGP--------KGQ 230 Query: 313 KILIYLDSAIMSVSGMRVSL-AEAI------------HYARRRHVSGGILIDQPVMKRAI 359 ++I L+ S+ G R+ + A+A+ + RR I Q V + + Sbjct: 231 GLVIALE----SLDGGRIGIAAQAVGIARAALEAALAYAGERRTFGKPIREHQGVAFK-L 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + AA L+ R A D ++EA+ A++ A T A V A++ + Sbjct: 286 ADMATRVDAARLLTQRAAWLKDHGYRVTQEASMAKLFASET-------ASFVTHAALQVL 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY ++ + R++R++ I G+ Sbjct: 339 GGYGYSKDYPVERYFRDARVTEIYEGT 365 >gi|260553825|ref|ZP_05826094.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260405035|gb|EEW98536.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 406 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLSGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ ++IA + R DE + E + + K C Sbjct: 293 GRPLAANQLIQKKLADMQMEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373 >gi|225378408|ref|ZP_03755629.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM 16841] gi|225209742|gb|EEG92096.1| hypothetical protein ROSEINA2194_04076 [Roseburia inulinivorans DSM 16841] Length = 384 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 31/263 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251 LTE GTD A +Q + + DG + L+G K F+++ ++D +I++A G Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R ++E G+P G + + K+G R ++T EL F + LLG P Sbjct: 181 RKKKNFSAFIVEKGAP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKDALLGPEGKGF-P 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 + + LD + ++ + +AE AI Y + R G + Q + +AD+A Sbjct: 239 I----AMHTLDGGRIGIASQALGIAEGALERAIAYTKERKQFGRSIAQQQNTQFKLADMA 294 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L ++ A + K S EAA A++ A T A AV E ++ GG G Sbjct: 295 TRIEAAQMLVYKAAMAKANQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYG 347 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI E + R R++ I G+ Sbjct: 348 YIREYDVERMMRDAKITEIYEGT 370 >gi|146307662|ref|YP_001188127.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145575863|gb|ABP85395.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 17/261 (6%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 + L +TE GG+D+A + ++ + D Y +SG K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRISGSKTFITSGVRADYYTVAVRTGGEGFGG 183 Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 V LL E G+P G R K+G ++ T EL F + L+G N + Sbjct: 184 VSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMANF 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L AIM+ +++L E++ +AR R G + V+K +A++A + + + Sbjct: 243 QSERLSLAIMANMTAQLALEESLKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREFT 302 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A +S +E + A K + +A + +A++ +GG GY+ E + R Sbjct: 303 YRQAAQMAAGRSVIKEISMA-------KNFATDIADRLTYDAVQIMGGMGYMRESLVERL 355 Query: 434 YRESPANSIL-LGSGNAMVLD 453 YR+ N IL +G G +++ Sbjct: 356 YRD---NRILSIGGGTREIMN 373 >gi|157140168|ref|XP_001647622.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108866505|gb|EAT32290.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 378 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255 LTE G+D AIT++ + D + L+G K F+++ M+ F + + G+ G C Sbjct: 123 LTEPHTGSDAGAITTRADRDGDS-FVLNGVKQFITTGKHAHMAIVFAVTDKAAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 FLVP + G R ++K+G ++ TV++ N LLG ++ Sbjct: 182 FLVPT-----ATPGFIVGRTEDKMGQHASDTVQIILENCRVPASSLLGKEGEGYRIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A S+ R + A+ YA+ R G +I+ + +AD+ + A Sbjct: 237 LEAGRIGI----AAQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +R A D K +EA+ A++ A + A + ++A++ GG GY + Sbjct: 293 GRLMVWRAAQLKDAGKPCLKEASMAKMFAS-------EAAEKIASDAIQIHGGVGYTSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRISQIYEGAND 365 >gi|260904522|ref|ZP_05912844.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium linens BL2] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 27/268 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253 + LTE GG+D+ A+ + K + Y ++G K W ++ SD +L + + Sbjct: 120 MALTEPGGGSDLQALRTAAAKDGED-YVINGSKTWITNARKSDLIALLCKTDPSAEPRHK 178 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 G ++ L+E G G + +K+G + T EL F N LLG + G + Sbjct: 179 GISII--LVEKG--EGFTVSKNLSKLGYKGVETCELVFENLRQPQSQLLGSVE-GVGFKQ 233 Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 MK L + A S+ + +L +A+ Y++ R G + + +A +A + A Sbjct: 234 MMKGLEIGRIQVASRSLGVAQAALNDAVKYSQERESMGKPIWRHQAVGNQLAKMATKLEA 293 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A ++D + EA A KY+ +MA V +A+ GG GY E Sbjct: 294 ARQLVLHAARTYDSGERVDMEAGMA-------KYYASEMAAEVALDAIRVHGGYGYSTEY 346 Query: 429 SIARHYRESPANSILLGSG-NAMVLDVL 455 + R+YR++P +++G G N + L V+ Sbjct: 347 DVERYYRDAPL--MIVGEGTNEIQLGVI 372 >gi|319791031|ref|YP_004152671.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315593494|gb|ADU34560.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 386 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 33/324 (10%) Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 Y MA EA GH+ V A V M TP + + + RE+ AP Sbjct: 67 YAMAMAEALGHVSCGGVPMAIGVQTDMCTPALAR-FGSDELRREF----LAPAIAGDTVG 121 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV--- 253 +G++E G+D+A + S +K D Y +SG K W +S +D ML +G V Sbjct: 122 CIGVSEPGAGSDVAGLKSHARKDGDD-YLISGQKMWITNSLQADWMCMLVNTSDGPVHRN 180 Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 +VP SP G+ + KIG S+ T + F N + +G+ G V Sbjct: 181 KSLVMVPM----DSP-GIEKAKKIRKIGMNSSDTGLIYFDNVRVPQRYRIGE--EGQGFV 233 Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M+ L +A S+ M +A+ I +A++RH+ GG L DQ ++ +A++ ++ Sbjct: 234 YQMQQFQEERLWAAASSLEPMEDCIAQTIEWAQQRHMFGGTLADQQWVQFKLAELKTEVE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A AL++R + + + E A+ A++ ++ V ++ GG G+ E Sbjct: 294 ALRALTYRACDLHVQGEDVLELASMAKLKT-------GRLTRQVSDTCLQFWGGMGFTLE 346 Query: 428 RSIARHYRESPANSILLGSGNAMV 451 ++R YR+ SI G+ M+ Sbjct: 347 NRVSRLYRDGRLGSIGGGADEVML 370 >gi|294624408|ref|ZP_06703099.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601292|gb|EFF45338.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 393 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 134 FALTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ L V E K + Sbjct: 194 TAFMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSV 250 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 251 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 310 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 311 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 363 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 364 YFRDAKITEIYEGT 377 >gi|195157174|ref|XP_002019471.1| GL12205 [Drosophila persimilis] gi|198454807|ref|XP_001359731.2| Arc42 [Drosophila pseudoobscura pseudoobscura] gi|194116062|gb|EDW38105.1| GL12205 [Drosophila persimilis] gi|198132962|gb|EAL28883.2| Arc42 [Drosophila pseudoobscura pseudoobscura] Length = 405 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ + D Y L+G K W + + A ++ A + + Sbjct: 147 LSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISA 205 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+VP+ L+ G + ++K+G R ++T +L F + +LG+ P Sbjct: 206 FIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLGE------PGFGF 254 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 255 KIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAM 314 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D ++ ++EAA A++ A C + ++ +GG GY+ Sbjct: 315 ESARLLTWRAAWLKDNKQAYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVA 367 Query: 427 ERSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 368 DMPAERHYRDARITEIYEGT 387 >gi|293609182|ref|ZP_06691485.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829755|gb|EFF88117.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 402 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 118 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 176 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 177 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 234 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F + ++ GP L+SA ++ + AE A Y R Sbjct: 235 VFVPEENVFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 288 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 289 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 341 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 342 GKALDIARMARDMMGGNGISDEFGVARH 369 >gi|153953270|ref|YP_001394035.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri DSM 555] gi|219853903|ref|YP_002471025.1| hypothetical protein CKR_0560 [Clostridium kluyveri NBRC 12016] gi|146346151|gb|EDK32687.1| Acyl-CoA dehydrogenase, short-chain specific [Clostridium kluyveri DSM 555] gi|219567627|dbj|BAH05611.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 562 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 30/280 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ GLTE G+D A T + Y ++G K F+++ +D +++ A Sbjct: 113 PLASGKKIAAFGLTEPNAGSD-AGKTETTAVLEGDHYVINGSKVFITNADYADTYVIFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + NK+G RS+AT EL F N + N+ Sbjct: 172 TTPGLGTKGISAFIIEKGMDGFTFGTHYNKMGIRSSATAELLFKN---LKVPKYNLLGKE 228 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMK 356 E KI A+ ++ G R+ +A +A+ Y++ R G + Q + Sbjct: 229 NEGFKI------AMQTLEGGRIGIAAQALGIAQGAYEKALSYSKERVQFGKPISRQQSIA 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I AA + + A E K+ E+A A++ + + V+ +A+ Sbjct: 283 FKLADMATKIRAARFMVYSAAVLKQEHKNYGMESAMAKL-------YASDICLEVVNDAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GGSG+I+ + R YR++ +I G+ L + N Sbjct: 336 QIYGGSGFIKGFPVERMYRDAKICTIYEGTNEIQRLIISN 375 >gi|42781443|ref|NP_978690.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|42737365|gb|AAS41298.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] Length = 569 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 23/273 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKQMSQFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R YR++ + I G+ L V +L K Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMK 411 >gi|148265075|ref|YP_001231781.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter uraniireducens Rf4] gi|146398575|gb|ABQ27208.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens Rf4] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 31/261 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GR- 252 LTE G+D A +T+ + DG + L+G K F++S P + F++ A + G+ Sbjct: 125 FALTETGAGSDPAGMTTTAVQDGDG-WLLNGSKIFITSAPYAGVFVVWAVTDRSAPKGKG 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VS 305 + CFLV E G P GL + + K+G ++AT EL F N L+G LN ++ Sbjct: 184 ISCFLV----EQGVP-GLIIGKQEEKMGQHASATNELIFDNCRIPKNALMGKLNDGFRIA 238 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 G + +I I + ++ M A YA R G + D ++ IAD + Sbjct: 239 VGELAGGRIGIGSLGLGLGLAAMDF----ATRYATERSQFGQKISDFQAIQWMIADAYTE 294 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L A + KS ++EA+ A++ A C +A++ +GG GY Sbjct: 295 LEAARLLLMNAAFRKETGKSFAKEASMAKMYATEAANKACY-------KAVQMLGGYGYT 347 Query: 426 EERSIARHYRESPANSILLGS 446 ++ + R+ R++ SI G+ Sbjct: 348 KDFPVERYARDARITSIYEGT 368 >gi|197122598|ref|YP_002134549.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196172447|gb|ACG73420.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 24/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCFLV 258 L+E + G+D A+ ++ + G +W S ++ ++ A+ EG G + Sbjct: 125 LSEPQAGSDAGAMRTRAVRRGGGWVIDGAKQWITSGDVAGVLVVWARTGPAEG--GGGVT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311 L+E G+P GL R ++K+G R+++TV L F S G + L V+ ++ Sbjct: 183 AFLVEAGTP-GLQVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAALDG 241 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++ I A + +R +L ++ YAR R G + + + +AD A++ A Sbjct: 242 GRVGI----ASQATGTIRAALDASVRYARDRQAFGVPIAEHQAVAFMLADTAVEHDTARL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ R A + + + EA+ A K W + A + A++ GG GY E+ +A Sbjct: 298 LALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFPVA 350 Query: 432 RHYRESPANSILLGS 446 R++R++ +I G+ Sbjct: 351 RYFRDARVQTIYEGT 365 >gi|115377697|ref|ZP_01464890.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella aurantiaca DW4/3-1] gi|310821553|ref|YP_003953911.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115365303|gb|EAU64345.1| acyl-CoA dehydrogenase, short-chain specific [Stigmatella aurantiaca DW4/3-1] gi|309394625|gb|ADO72084.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 29/287 (10%) Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 ++F E P T +G GLTE G+D + + + + D + L+G K F+ Sbjct: 99 RVFGNEAQKRKYLPKLATGEWLGAWGLTEPGSGSDASGLRATAVRQGDA-WVLNGAKMFI 157 Query: 236 S-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 + + DAF++LA E R + +LE G G + + K+G RS+ T EL Sbjct: 158 TQGTVGDAFVVLALTSPEKRQKG-ITAFILEKGM-KGFSQRPIHGKLGMRSSDTAELILE 215 Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHV 344 N LG+ V G ++ +KIL D +++ + R +L E++ YAR R Sbjct: 216 NVEVPDSQRLGE--VDRGFIDTLKIL---DKGRITIGALAVGLGRGALEESVRYARERSA 270 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + ++ AD+ ++ AA L R A+ D+ + ++ A+ A++ A Sbjct: 271 FGQPIAEFQGLRWMFADMKTELDAARLLVHRAASMADQNQPYTQAASMAKLFASEAATRA 330 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 C +A++ GG GY E + R+ R++ I G G + V Sbjct: 331 CN-------KAVQIHGGYGYTREFPVERYLRDAKLCEI--GEGTSEV 368 >gi|332285779|ref|YP_004417690.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp. T7-7] gi|330429732|gb|AEC21066.1| acyl-CoA dehydrogenase domain-containing protein [Pusillimonas sp. T7-7] Length = 384 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 24/248 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE--GRVGCF 256 LTE G+D A++ + + D Y L+G K F++ +P +D F ++A+ + R G Sbjct: 122 FALTEPGSGSDAASLRTTAVRDGDH-YILNGTKRFITNAPEADVFTVMARTDPAARGGSA 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E + GL ++ K+G R T ++ + L+G G MK Sbjct: 181 ISAFVVEKNTA-GLSLGKIDKKMGQRGAHTCDVVLEDCRVPAANLIGGRE-GVGFKTAMK 238 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +L D + ++ + V +AE A+HYA R G + + +++ +AD +I A Sbjct: 239 VL---DKGRLHIAAVSVGVAERMLNDALHYAMEREQFGQPIAEFQLIQAMLADSKAEIYA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A ++ A DE + S EA+ +K + +M V A++ GG+GY+ + Sbjct: 296 ARSMVIDAARRRDEGQDVSTEAS-------CSKLFATEMCGRVADRAVQIYGGAGYVSDY 348 Query: 429 SIARHYRE 436 I R YR+ Sbjct: 349 GIERFYRD 356 >gi|330505673|ref|YP_004382542.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328919959|gb|AEB60790.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 392 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 114 FGNEATKQKYLPKLASGEYIGCFGLTEPNHGSDPGSMVTRAKKVEGG-YRLTGSKMWITN 172 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 173 SPIADVFVVWAKDDAGEIRGF----VLEKGW-QGLSAPAIHGKVGLRASITGEIVMDNVF 227 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 D+ GP L+SA +S + AE A Y R+ G Sbjct: 228 CPEENAFPDVRGLRGP------FTCLNSARYGISWGALGAAEFCWHTARQYVLDRNQFGR 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 282 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E IARH Sbjct: 335 ALDIARMARDMLGGNGISDEFGIARH 360 >gi|325524811|gb|EGD02776.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. TJI49] Length = 395 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K++ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YSLSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L+ +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PDENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|207724418|ref|YP_002254815.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206589639|emb|CAQ36600.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252 I LTE G+D A++ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N + L+G + G Sbjct: 179 ISAFIVP-----ADAPGITLGKPDRKMGQRGTKTCDVMLDNVRVSAANLIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLVTDAAAYAKARRQFGRPIADFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK + ++A K +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDGARRYD-AKPAGRQDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E + R YR+ Sbjct: 349 IAEYKVERFYRD 360 >gi|218781113|ref|YP_002432431.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762497|gb|ACL04963.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 602 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/370 (22%), Positives = 149/370 (40%), Gaps = 71/370 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252 + LTE + G+ +A IT+ DG Y + G K F+S+ D +MLA++EG Sbjct: 162 MALTEPQAGSSLADITTTAYPQEDGSYKIKGQKVFISAGDHDGVENIVHLMLAKIEGAPP 221 Query: 253 ----VGCFLVP--RLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + F+ P R DG N + ++ +K+G R EL + G+L+G Sbjct: 222 GVKGISLFVAPKYRPTADGKLEYNDIAVSQVFHKMGYRGAPITELAIGDKGECVGWLVGK 281 Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGGIL------- 349 P +K + ++ A + V S+A A +YA ++ G L Sbjct: 282 ------PHHGLKYMFQMMNGARLDVGNAATSIACAAYYASLDYAKQRPQGRKLGQKDLSK 335 Query: 350 -----IDQPVMKRAIADIALDIAAATALSFRL--ANSFDEAKSRSEEAA----YARIMAP 398 I+ +KR + + + +L + + A + EEA I+ P Sbjct: 336 PQVSIIEHADVKRMLLQQKAIVEGSLSLILQCHKYEDLETAAADPEEAEKYNLLCEILTP 395 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 I K + +M + A++C+GG GY ++ + ++YR+ + I G+ +D+L Sbjct: 396 IAKTYPSEMGIISTSNAIQCLGGYGYCQDFPVEQYYRDIRIHPIHEGTTGIQGMDLL--- 452 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518 G+KV+ + + L KE+ + E+ + A L Sbjct: 453 ---------------------GRKVVMLEGKAFKLFKEEMEKTLVMAEESDVYKEYAGLL 491 Query: 519 RAGMNDIADV 528 R + DI +V Sbjct: 492 RDALADIEEV 501 >gi|126739624|ref|ZP_01755316.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] gi|126719270|gb|EBA15980.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 31/324 (9%) Query: 135 IRAARLYLMAQLEAGHL---MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 +RAA MA+ AG + M+ S +A + + + P+I S E + Sbjct: 70 LRAAYSEEMARCGAGGVTAAMAGRTISVEPIARLACDEIRERVLPEILSGEKGSS----- 124 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV 249 LG+TE GG+D+A + + ++ DG + L+G K F++ M SD F++ A+ Sbjct: 125 --------LGVTEPGGGSDVANLKTTARR--DGNHWVLNGSKTFITGGMTSDYFVIPART 174 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG--NRSNATVEL-EFSNTFGFLLGDLNVST 306 G+ G + + G L K+G AT+ L E ++G+ Sbjct: 175 GGK-GLAGISLFFVEADTAGFSRSPLPRKMGWWCSDQATLYLDEVRVPASHMMGEEGTGF 233 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + + L+ + M+ L ++I +A+ R G LI+ V++ IA+++ I Sbjct: 234 LAIMNNFNMERLNLIAAVLGMMKACLEDSIAWAQDRETFGQKLIEHQVIRHKIAEMSARI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A AL + +E + E + A+ A +C +EAM+ +GG+GY+ Sbjct: 294 DAVEALLRMICWQVNEGEMPVAELSKAKFFATKACEFCA-------SEAMQILGGAGYLR 346 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + R YRE +I GS M Sbjct: 347 GNRVERIYREVKVMAIGGGSEEIM 370 >gi|229541829|ref|ZP_04430889.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229326249|gb|EEN91924.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 403 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+A I + +K D Y L+G K W ++D F++ A Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAGIGTTAEKDGD-FYILNGQKTWISLCDVADHFLVFAY 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + F+V R + G + +K K+G R+ T EL F N + N Sbjct: 172 TDKAKKHHGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 223 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + E KI + LD+ +V+ ++ L ++ Y R G + ++++ Sbjct: 224 LLGEEGEGFKIAMSALDNGRFTVAAGACGLIQACLEASVKYCHERKTFGHEIGKHQLVQQ 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA + + L FR ++ K + E + A K+ C A +A++ Sbjct: 284 MIAKMEAGYQMSRLLVFRAGELKNQGKRNTRETSLA-------KWQACDFANEAANDAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY E + R+ R S A I G+ Sbjct: 337 IHGAYGYSSEYPVERYLRNSKAPVIYEGT 365 >gi|78044080|ref|YP_360183.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77996195|gb|ABB15094.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 381 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG---- 254 GLTE G+D ++ + + D Y L+G K F+++ ++ +++ A V+ G Sbjct: 123 FGLTEPSAGSDAGSLKTTAVRDGD-YYILNGSKIFITNGGEAEIYVVFATVDKSKGHRGI 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V E G+P G + + + K+G RS+ TVEL F N + N+ + K Sbjct: 182 SAFIV----EKGTP-GFSFGKKEKKLGIRSSPTVELVFENC---RIPKENLLGEEGQGFK 233 Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L LD + ++ V +A+ A+ YA+ R G + + + +AD+A I Sbjct: 234 IALSTLDGGRIGIAAQAVGIAQGAYEAAVKYAKERTQFGKPIAEFQGVSFVLADMATKIQ 293 Query: 368 AATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA L + A N+ K+ A + K + + A V +A++ GG G Sbjct: 294 AARLLVYHAAWLESNNLPYGKA-----------AAMAKLFASETAMEVTTKAVQIFGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + R R++ I G+ Sbjct: 343 YTREYPVERMMRDAKITEIYEGT 365 >gi|313886903|ref|ZP_07820606.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923600|gb|EFR34406.1| acyl-CoA dehydrogenase, C-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 577 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + +D + L+G K F+++ S+ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSNIHLVLARSEEGTKDA 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL F + L G+ + G + ++ Sbjct: 231 RGLSMFIYDAKKGGVTVRRIENKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + + V ++EA + YA RH G + P + +A I A Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDKFPAVYEMLALIRAKADATR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 A + + D K+ R E+ Y+R+ PI K ++A + Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 + ++ GGSGY+++ + R YR+ +I G+ V+ + + GT F+ LE Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461 Query: 474 Q 474 + Sbjct: 462 E 462 >gi|296392632|ref|YP_003657516.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985] gi|296179779|gb|ADG96685.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM 44985] Length = 611 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 51/300 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEG-RVG 254 LTE G+D+ A T++ + DG + + G K F++S S + ++LA+ EG R G Sbjct: 164 LTEPDAGSDVGAGTTKAVEQPDGTWHIEGVKRFITSATSGDYFDNIFHLVLARPEGARAG 223 Query: 255 C-----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 F VP+ D G NG+ +++K+G +++AT EL F G+L+ Sbjct: 224 TKGLSLFFVPKWHYDFEKRERGERNGVFVTGVEHKMGIKASATCELTFGQHGKPAVGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 G ++ +E+ ++LI I S++ + + A+ +A+ R V G Sbjct: 284 GGVHDGIAQMFDVIENARMLI----GIKSIATLSTAYLNALEFAKER-VQGSDFTQMLNK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARI 395 ++ P ++R++ + AL A D A ++ E+ AY Sbjct: 339 DAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLLAAAYQDPAVAQRLFGADEDLAYRVNDF 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + + A +A++++ GGSG++++ I ++ R++ +++ G+ LD Sbjct: 399 LLPIVKGFGSEQGYAHLADSLQIFGGSGFLQDYPIEQYIRDAKIDTLYEGTTAIQSLDFF 458 >gi|149201869|ref|ZP_01878843.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035] gi|149144917|gb|EDM32946.1| acyl-CoA dehydrogenase [Roseovarius sp. TM1035] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ ++ + G Y L+G K F+S SDA+I++ + G + Sbjct: 124 LTEPGSGSDAAALKTRAERTNAG-YTLNGTKAFISGGGYSDAYIVMVRTGGDGPKGISTV 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 +E G+ GL Y L++K+G RS T +++F N N+S + ED K Y Sbjct: 183 YVEAGT-EGLSYGGLEDKMGWRSQPTRQVQFDNC--------NISAENLVGEDGKGFTYA 233 Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A S+ + L + + Y R G + ++ +AD+ +++ AA Sbjct: 234 MNGLDGGRLNIAACSLGAAQQGLTQTLAYMAERRAFGKPIDQFQALQFRLADMEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D +A A + K + + V+ + ++ GG GY+ + Sbjct: 294 RTFLRQAAWKLD------NDAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372 >gi|94494915|ref|ZP_01301496.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58] gi|94425181|gb|EAT10201.1| isovaleryl-CoA dehydrogenase [Sphingomonas sp. SKA58] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 24/256 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257 L ++E G+D+ ++ + ++ G Y L G K W ++P +D ++ A+ EG G + Sbjct: 128 LAMSEAGAGSDVVSMKLKARETDKG-YVLDGTKYWITNAPYADTLVVYAKTGEGSRG--I 184 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 L+E G Q++ +K+G R + T EL F N G L G + V ++ Sbjct: 185 TAFLIEKGMAGFSIGQKI-DKVGMRGSPTAELVFDGCEVPRENVMGPLNGGVGVLMSGLD 243 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + ++ A + + M+ L I Y R R G + +M+ +AD+ + + +A Sbjct: 244 YERAVL----AGIQLGIMQACLDTVIPYVRERKQFGQPIGSFQLMQAKVADMYVALNSAR 299 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A S D K+ +AA A ++A + A V EA++ +GG+GY + + Sbjct: 300 AYVYAVARSCDAGKTTRFDAAGAILLA-------SENAVRVALEAVQALGGAGYTRDWPV 352 Query: 431 ARHYRESPANSILLGS 446 R+ R++ I G+ Sbjct: 353 ERYMRDAKLLDIGAGT 368 >gi|322705809|gb|EFY97392.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23] Length = 447 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 33/299 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K W PK+ T+ L+E G+D A+ ++ ++ +DG Sbjct: 170 LKKKWLPKL--------------ATNTVASFCLSEPVSGSDAFALATRAEETADGFKING 215 Query: 230 GHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G W +S ++ FI+ A ++ G + ++E G+P G + + K+G R+++T Sbjct: 216 GKMWITNSKEAEFFIVFANLDPSKGYRGITAFVVEKGTP-GFSIAKKEKKLGIRASSTCV 274 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA-RR 341 L F + ++ N+ + K I L+ + ++ LA A+ Y Sbjct: 275 LSFDDV---VVPKENILGERGQGYKYAISLLNEGRIGIAAQMTGLALGSFENAVKYVWND 331 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G ++ + M+ IA +IAAA AL + A + + ++AA A++ Sbjct: 332 RKQFGSLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGEDFVKDAAMAKL------ 385 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + LL+K Sbjct: 386 -YASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 443 >gi|320321950|gb|EFW78046.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. B076] gi|320330944|gb|EFW86918.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872175|gb|EGH06324.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D PV +++A + A D+ + F + + +R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|262278703|ref|ZP_06056488.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259054|gb|EEY77787.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 43/310 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------E 250 LTE G+D+ I ++ + DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTKAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGT 225 Query: 251 GRVGCFLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ D N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVDDEGNLQDRNQVVCSAIEHKMGIHGNATCVLNFDGAQGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPKYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++ + AL++ LA D +S +++ + + PI K + + Sbjct: 346 AVRSMLMTQKAFAEGGRALAYFLAQHVDIVESSADQEQQKQSDNLLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLNSEGKLL 465 Query: 459 EKGTNLFEQL 468 + T+L +Q Sbjct: 466 KNMTDLIDQF 475 >gi|229000129|ref|ZP_04159699.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] gi|228759666|gb|EEM08642.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] Length = 379 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDALGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATSVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|228469299|ref|ZP_04054325.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3] gi|228309198|gb|EEK17800.1| acyl-CoA dehydrogenase family protein [Porphyromonas uenonis 60-3] Length = 576 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + +D + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSDIHLVLARSEEGTKDA 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R+++K+G + T EL F + L G+ + G + ++ Sbjct: 231 RGLSMFIYDAKKGGVTVRRIEHKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + + V ++EA + YA RH G + P + +A I A Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDKFPAVYEMLALIRAKADATR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 A + + D K+ R E+ Y+R+ PI K ++A + Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 + ++ GGSGY+++ + R YR+ +I G+ V+ + + GT F+ LE Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461 Query: 474 Q 474 + Sbjct: 462 E 462 >gi|254386287|ref|ZP_05001596.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194345141|gb|EDX26107.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 390 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256 L+E G+D A++T++ + D + ++G K W ++D + +LA+ + F Sbjct: 133 LSEPAAGSDAASLTTKAVRDGD-EWVITGTKAWITHGGVADFYTVLARTGAPGPKGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G GL + K+G + + T +L F G + D + I L Sbjct: 192 LVP-----GDVEGLTAAVPEKKMGMKGSPTAQLHFD---GVRVPDSRRIGEEGQGFTIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD+ + ++ V +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 AALDAGRLGIAACAVGVAQAALDEAVTYALDRKQFGHPIADFQGLRFMLADMATKIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D K S +AA A K +C A AV +A++ +GG GY + + Sbjct: 304 ALYLAAARLRDAGKPFSRQAAMA-------KLFCTDAAMAVTTDAVQILGGYGYTADFPV 356 Query: 431 ARHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 357 ERLMREAKVLQIVEGT 372 >gi|170732135|ref|YP_001764082.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169815377|gb|ACA89960.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 395 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L+ +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|332978732|gb|EGK15426.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 383 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 35/294 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T K W PK+ + EY +G + +TE G+D+ AI + K D Sbjct: 107 TEEQRKAWIPKLATGEY--------------VGAIAMTEPTTGSDLQAIKTYAVKDGDD- 151 Query: 226 YCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 Y ++G K F+++ I+LA + +G G L+ ++E G R K G Sbjct: 152 YIINGSKTFITNGQHANLIVLACKTDREKGAQGVSLI--VVETDGLEGFERGRNLKKTGL 209 Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 + T EL FSN LLG + G ++ M+ L L A+ ++++L + Sbjct: 210 SAQDTSELFFSNVRVPQKNLLGSVE-GLGFIQMMQELPQERLIIALTGCGAIKLALELTL 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y ++R G + + +A++ D A AL + E K + +A+ Sbjct: 269 DYVKQREAFGRPIWKFQNTRFKLAEVQADYLAVRALCDSAVEAMIEGKLTAPQAS----- 323 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + KYW + VI E ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 324 --LIKYWVTEKQCKVIDECLQLFGGYGYMSEYPIARMYADARVQKIYGGTNEIM 375 >gi|54294833|ref|YP_127248.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens] gi|53754665|emb|CAH16150.1| hypothetical protein lpl1911 [Legionella pneumophila str. Lens] Length = 375 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 36/281 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P+I S E L LTE G+D+ + +Q D K+ Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++D F++LA +G++ LV + +GL + N +G RSN E+ F N Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 LLG + + + I LD + + V L + A+ Y ++R Sbjct: 210 CRIPKTNLLGSIGIGFNCI----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 L + ++++ IA++ + + AA L F E + + A A + I KY Sbjct: 266 DRRLDEHQLIQKMIAEMVVQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KM V A++ G +G+ + + R+YR++ I+ G+ Sbjct: 320 KMVVFVSNHALQIFGAAGFEDTYPVERYYRDAKVMEIIEGT 360 >gi|331009693|gb|EGH89749.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 600 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 64/352 (18%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 245 MLAQVEGRVG------CFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ G F+VP+ L +DGS N + L +K+G + + L F + Sbjct: 212 VLAKLPDAPGGVKGISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFGD 271 Query: 294 T---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 272 NGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--PQ 325 Query: 347 GILIDQ------PV-------------MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 G L D PV +++A + A D+ + F + + +R Sbjct: 326 GRLPDSKSPESTPVPIIQHADVRRMLLIQKAYVEGAFDLCLYASRLFDDTQTGETEDARK 385 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 386 HAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTH 445 Query: 448 NAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 LD+L L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 446 GIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|330906226|ref|XP_003295397.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1] gi|311333343|gb|EFQ96502.1| hypothetical protein PTT_00758 [Pyrenophora teres f. teres 0-1] Length = 437 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 47/307 (15%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 ++ K+W PK+ T+ L+E G+D A+ ++ + +G Y + Sbjct: 159 KLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDNG-YKI 203 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 SG K W +S ++ FI+ A ++ + F+V E G+P G + + K+G + Sbjct: 204 SGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIV----EKGTP-GFSIAKKEKKLGIK 258 Query: 283 SNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334 +++T VE+ N G + G + + +I I ++G+ + E Sbjct: 259 ASSTCVITFDDVEIPRDNLLGKEFEGYKYAIGLLNEGRIGI-----AAQMTGLALGAWEN 313 Query: 335 AIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 A YA G LI + M+ +A +I AA AL + A + + +AA A Sbjct: 314 AASYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARKKEAGEDFIMDAAMA 373 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++MA ++A V +A+E +GG G++ E +++R+S +I G+ N + Sbjct: 374 KLMA-------SQVAGKVSGQAIEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTT 426 Query: 454 VLNLLEK 460 + LL+K Sbjct: 427 IGKLLQK 433 >gi|154484667|ref|ZP_02027115.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC 27560] gi|149734515|gb|EDM50432.1| hypothetical protein EUBVEN_02384 [Eubacterium ventriosum ATCC 27560] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 49/296 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI------SDGIYCLSGHKWFLSS-PMSDA 242 P+ K GLTE GTD +QGQ+ + + L+G K F+++ +D Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD-----AQGQQTKAVFDEATNEWVLNGSKCFITNGKYADV 167 Query: 243 FIMLA---QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS----- 292 +I++A +VE GR+ + ++E G+P G + + K+G R +AT EL F Sbjct: 168 YIVIAVTGKVEKRGRMMKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFEDCRIP 226 Query: 293 --NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 N G N++ + LD + ++ + LAE I Y + R Sbjct: 227 AENLLGKKGKGFNIA---------MHTLDGGRIGIAAQALGLAEGALETTIEYVKERKQF 277 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G + + +AD+A + AA L ++ A + K+ S EAA A++ A Sbjct: 278 GRSIGQFQNTQFQLADMATKVEAAKMLVYKAAMAKATQKTYSFEAAQAKLCA-------A 330 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLE 459 ++A V +A++ GG GYI E + R R++ I G+ MV+ NLL+ Sbjct: 331 EVAMEVTTKAVQLHGGYGYIREYDVERMMRDAKITEIYEGTSEVQRMVISA-NLLK 385 >gi|58584002|ref|YP_203018.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625780|ref|YP_453152.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188574667|ref|YP_001911596.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428596|gb|AAW77633.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369720|dbj|BAE70878.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519119|gb|ACD57064.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 387 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 43/311 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + PK+ S E+ +G L ++E G+D+ ++ + D Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G K W + P +D ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKL-DKLGMRG 211 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL FS N G L G + V ++ ++++ + + M V+L Sbjct: 212 SNTCELVFSDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALP--- 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + + +M+ +AD+ + + A A + +A + D + ++AA A + Sbjct: 269 -YVHERKQFGEPIGNFQLMQAKLADMYVGLNACRAYVYAVARACDAGCTTRQDAAGAILY 327 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A W + +A++ +GG+GYI + R +R++ I G+G + + +L Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377 Query: 457 LLEKGTNLFEQ 467 G LFE+ Sbjct: 378 ---IGRELFER 385 >gi|323485654|ref|ZP_08090992.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum WAL-14163] gi|323401004|gb|EGA93364.1| hypothetical protein HMPREF9474_02743 [Clostridium symbiosum WAL-14163] Length = 638 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + GLTE G+D A T + Y L+G K F++ +P +D +++ A Sbjct: 113 PLARGEKIGAFGLTEPNAGSD-AGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F++ + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A K + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHVPYGMESAMA-------KQYASDIALEVTNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|313901750|ref|ZP_07835177.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] gi|313467986|gb|EFR63473.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter subterraneus DSM 13965] Length = 379 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 42/324 (12%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 S ++T A+ V+L TP +F S E AP + GLTE G++ Sbjct: 82 STALTVAAHVSLGCTPLY-------LFGSEELKARWLAPALRGEKIAAFGLTEPEAGSNT 134 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVGC--FLVPRLLEDG 265 AAI ++ ++ D + + G K F+++ F+++A V GR G LVPR Sbjct: 135 AAIRTRARQEGD-RWVIEGTKIFITNGSHADFVVVAAVTDPEAGRDGISNILVPR----- 188 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 G R K+G ++ T EL F L+G+ + L LD Sbjct: 189 EAPGWRAVRRYEKLGLHASDTAELVFDGCRVPLDHLVGERGKG-----HQQFLQTLDGGR 243 Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 + + + V +A+A + YAR R G + ++ +AD+A + AA L +R A Sbjct: 244 IGIGALSVGIAQACLDAALEYARHRRQFGRPISKFQAIQFKLADMATQLEAARWLVYRAA 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D + EAA A++ A ++A EA++ GG+GY + + R+ R+ Sbjct: 304 WLRDRGRPYRREAAMAKLFA-------SELAVRAALEAIQIHGGAGYTRDFPVERYLRD- 355 Query: 438 PANSILLGSGNAMVLDVLNLLEKG 461 A + +G G + + ++ E G Sbjct: 356 -AKLMEIGEGTSEIQRLVIARELG 378 >gi|262196962|ref|YP_003268171.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262080309|gb|ACY16278.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D AA + + D W + P++D ++ A + G Sbjct: 123 FALSEPEAGSDAAAQRTTAVRDGDEWVIQGTKNWITNGPVADTMVLFAMTDKEQGHRGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE-------LEFSNTFGFLLGDLNVSTG 307 F+VP G+ +K+G R + + + L S G + G V+ Sbjct: 183 SFIVPM-----DTAGVRCGEPDDKLGIRGSKSSQVFLDDARLPASALLGEVGGGFKVAMS 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A ++ R +L +A+ Y+ R G + + +AD+A ++ Sbjct: 238 TLDGGRIGI----AGQALGIARAALEDALDYSLNRKTMGKPIAKHQAISFKLADMATELD 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L+ R A D + + AA A K + +A EA++ GG+GY+ E Sbjct: 294 AARLLTLRAAYLKDSGQPYGKAAAMA-------KLYASDVANRAAREAIQIFGGNGYVTE 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + RH+R++ I G+ L + N L K Sbjct: 347 YPVERHFRDAKITEIYEGTSEIQRLVIANHLFK 379 >gi|167537125|ref|XP_001750232.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771222|gb|EDQ84891.1| predicted protein [Monosiga brevicollis MX1] Length = 395 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 32/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGRVGCF 256 +G+TE G+D+ I++ K D + ++G K F+S+ M D I++A+ +E + Sbjct: 139 IGMTEPGAGSDLQGISTTAVKDGDH-WVINGSKVFISNGQMCDYVIVVAKTDLEAKRAAH 197 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + L D G +K+G ++ T EL F + +LG++N K Sbjct: 198 GLSLFLVDAGTAGFTKGANLDKMGLKAQDTSELFFDDCRVPESAILGEVN---------K 248 Query: 314 ILIYLDSAI----MSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364 YL S + + + M + AEA++ Y R GG L + ++ +A++ Sbjct: 249 GFYYLMSELPQERLLLGVMATAHAEAMYEWTRAYINDRKAFGGTLANLQTVRHTMAELKT 308 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 IA A A + D+ E + MA ++KYWC ++ V ++ GG GY Sbjct: 309 SIAVARAFT-------DQCIQLHAEGRLTQEMASMSKYWCTELEGKVADVCVQLHGGWGY 361 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E I+R + ++ I G+ M Sbjct: 362 MSEYKISRAFTDARVQRIYGGANEIM 387 >gi|126640210|ref|YP_001083194.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 333 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 69 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGD-YYILNGAKQFITSGNNAGVIIVFAV 127 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 128 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 182 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 183 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 238 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 239 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 291 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 292 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 323 >gi|332993525|gb|AEF03580.1| isovaleryl-CoA dehydrogenase [Alteromonas sp. SN2] Length = 389 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ + QK D Y L+G+K W + P + F++ A+ + + G Sbjct: 130 LAMSEPNAGSDVVSMKLRAQKRGDK-YILNGNKMWITNGPDAHTFVIYAKTDPQAGPKGI 188 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R P Q+L +K+G RS+ T EL F + + N+ E ++ Sbjct: 189 TAFIVERDF----PGFTRAQKL-DKLGMRSSNTCELVFQDC---EVPAANILGKEGEGVR 240 Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ LD + +SG M+ + + Y R G + +++ +AD+ + Sbjct: 241 VLMSGLDYERLVLSGGPLGIMQACMDVVVPYIHDREQFGQSIGQFQLVQGKVADMYTQMN 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA A + +A S D + ++AA A + + ++A + +A++ +GG+GYI E Sbjct: 301 AARAYVYTVAKSCDRGDTTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINE 353 Query: 428 RSIARHYRESPANSILLGS 446 S R R++ I G+ Sbjct: 354 YSTGRLLRDAKLYEIGAGT 372 >gi|328952281|ref|YP_004369615.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109] gi|328452605|gb|AEB08434.1| Butyryl-CoA dehydrogenase [Desulfobacca acetoxidans DSM 11109] Length = 385 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K LTE + G+D AI + + D Y L+G K W ++ + + ++A Sbjct: 112 PLAKGDHLAAFALTESQAGSDAGAIQTIAVRDGDS-YILNGTKQWITNAGEAGIYTVIAL 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FG 296 + G + + G+ + + + K+G R++ T E+ F N FG Sbjct: 171 SDRSKGARGASAFIVEADDPGISFGKKEQKMGIRASVTREIVFQNCRIPANRLIAKEGFG 230 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--EAIHYARRRHVSGGILIDQPV 354 F++ +K L + + +++ A EA+ +AR R G +I Sbjct: 231 FVIA-----------LKTLDFSRPGVGALALGLAQAALEEAVIFARERQQFGHPIISFQA 279 Query: 355 MKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +A++A + AA AL + +A + D + K S+E+A A++ + MA V Sbjct: 280 VQHMLANMATQLEAARALVYAVARAIDHDPKEFSKESAMAKL-------FPTDMAMQVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +A++ +GG GY+ E + + R++ I G+ N ++ +V+ Sbjct: 333 DAVQILGGHGYMREYPVEKMMRDAKILQIFEGT-NQILRNVIG 374 >gi|293611087|ref|ZP_06693386.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826739|gb|EFF85105.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 593 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 164/404 (40%), Gaps = 53/404 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSGGILIDQPV--------MKRAIADIALDI 366 I + + A YA + R +G ++P ++R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANN 357 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIG 420 + A + + D K ++ AA + ++ PI K + A +A G Sbjct: 358 EVSRAFAVYVGQQLDITKFSTDAAAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFG 417 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSS 479 G GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 418 GHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAND 477 Query: 480 GKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 478 LDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521 >gi|320354114|ref|YP_004195453.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122616|gb|ADW18162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 382 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 41/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-- 255 GLTE G+D + I + + DG + L+G K W + S + ++A + G Sbjct: 122 FGLTEANAGSDASGIRTTA--VLDGDEWVLNGTKQWITNGGESQIYTIVALTDPNKGARG 179 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------- 304 F+V EDG P G Y + ++K+G R++AT EL +L D + Sbjct: 180 ASIFVV----EDGDP-GFSYGKKEDKMGIRASATREL--------ILKDCRIPKDRLVGK 226 Query: 305 -STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 TG + MK L I S V + +L EA+ YA++R +I ++ +AD Sbjct: 227 RGTGFITVMKTLDMSRPGIASLGVGLAQAALDEAVTYAKQRVQFAKPIISFQAVQHILAD 286 Query: 362 IALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +A+ + AA +L + A D+ K S+ ++ + K + MA V +A++ +G Sbjct: 287 MAIQLEAARSLVYAAAKHIDKHPKDMSK-------VSSMCKVFATDMAMKVTTDAVQVLG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY++E + + R++ I G+ Sbjct: 340 GYGYMKEYPVEKMMRDAKILQIYEGT 365 >gi|300711203|ref|YP_003737017.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] gi|299124886|gb|ADJ15225.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] Length = 372 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 26/256 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCF 256 L+E G++ A ++++ ++ DG Y + G K W + + I+ A+ E + F Sbjct: 120 FALSEPEAGSNPAEMSTRAER--DGEEYVIDGKKQWITNGSRAGVVILFAKTGENEITQF 177 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDM 312 LVP +GL + + K+G R++ T L F G + + N T G + Sbjct: 178 LVP-----ADSDGLEVGKKEEKLGLRASDTTALLFD---GVRVPEENRLTEEGRGLSAAL 229 Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 IL + A SV + ++ +A+ YA R GG + + ++ +AD+ + AA Sbjct: 230 SILTGGRIGIASQSVGLAQAAMDDALAYATEREQFGGPISEIQTIRHKLADMETKLRAAR 289 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ EA R + R+ A I KY+ + A + EA++ GG+GY + + Sbjct: 290 LLTR-------EAARREDAGEDPRLDASIAKYFASEAAMEITNEAVQIHGGAGYTTDFDV 342 Query: 431 ARHYRESPANSILLGS 446 R+YR++ +I G+ Sbjct: 343 ERYYRDARITTIYEGT 358 >gi|256372298|ref|YP_003110122.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008882|gb|ACU54449.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 404 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 22/281 (7%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 W + R Y P + + S L+E G+D+A++T++ + D Y LSG K Sbjct: 120 WGSEDLKRRYLPRVASGEAQASYC----LSEPDAGSDVASMTTRAVRDGDS-YVLSGTKA 174 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------ 286 W ++ +SD + + A+ + G + + + + G+ +L++K+G R + T Sbjct: 175 WITNAGISDTYTVFAKTDPSAGHRGISAFVVE-ADWGVQVAKLEHKLGVRGSPTGQIVLD 233 Query: 287 -VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 V + +N G ++ G ++ + +I +V + +L A+ Y + R Sbjct: 234 EVRVPVANRIGEEGQGFYIAMGTLDRSRPMI----GAQAVGIAQGALDAAVAYGKERRQF 289 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G + D ++ IAD+A I AA L +R D + +E R+ A + K + Sbjct: 290 GRPITDNQGIQFTIADLATQIEAARGLVYRACARIDADEPGTE---LTRLGA-MAKLFAS 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ +GG GY + + R +R++ I G+ Sbjct: 346 DTAMRVTTDALQLLGGYGYTMDFPLERMFRDAKITQIYEGT 386 >gi|169632134|ref|YP_001705870.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|169150926|emb|CAO99533.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii] Length = 375 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AAI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARFKEVGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|117928415|ref|YP_872966.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648878|gb|ABK52980.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus 11B] Length = 391 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 27/272 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256 L+E G+D AA+ +Q + + G Y LSG K W S +D + ++A+ + + CF Sbjct: 121 LSEPHAGSDAAALRTQAEPTAAG-YRLSGTKAWITHSGHADFYTVMARTSPDRDHGISCF 179 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LV GL + K+G R++ T +L ++ ++ E ++I L Sbjct: 180 LV-----SADAPGLQAGVPERKMGLRASPTAQLHLADV---VVEPSRRIGAEGEGLRIAL 231 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ LA+A + YA +RH G + + + +A++ +AAA Sbjct: 232 AALDVGRLGIAACATGLAQAALDAAVDYAAQRHQFGRPIREFQGVAFLLAEMTAAVAAAR 291 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A A S D + + +AA A+++ C A V +A++ GG+GY+E+ + Sbjct: 292 ATYLAAARSLDAGRVVTRDAAIAKLI-------CSDTAMRVTTDAIQIFGGAGYVEDYPV 344 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 R++RE+ A I+ G+ L + L + T Sbjct: 345 ERYFREAKALQIVEGTNQIQRLVIARTLGRDT 376 >gi|71733383|ref|YP_272797.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553936|gb|AAZ33147.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 670 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 52/330 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + Sbjct: 222 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 281 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 282 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 340 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 341 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 394 Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 G L D PV ++R + + A L + FD+ ++ E A Sbjct: 395 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 454 Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 455 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 514 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLFSTLEQ 474 LD+L L + G +QL + + Sbjct: 515 HGIQSLDLLGRKLAQNGGTGLKQLLRLISE 544 >gi|84498103|ref|ZP_00996900.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84381603|gb|EAP97486.1| acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 392 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 30/288 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHK-WFLSSPMSDAFIM 245 P+ + GL+E+ G+D A++ + + D + L+G K W ++ +SD + + Sbjct: 119 PLAAGETSFSYGLSEREAGSDTASMKCRAKLDKSAGDDSWVLNGQKSWITNAGVSDYYTV 178 Query: 246 LAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 LA + + F+V + S G + + K+G + + T EL F N + Sbjct: 179 LAVTDPDGTRGNNISAFVVEK-----SDEGFTFGEKERKLGIKGSPTRELIFDNVR--IP 231 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 GD + P E +KI L LD +++ V +A+ A+ Y + R G + + Sbjct: 232 GD-RIIGAPGEGLKIALRTLDHTRVTIGAQAVGIAQGALDHALAYVKERKQFGKNIAEFQ 290 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+A+++ AA + + A AKS +A + K + +A V Sbjct: 291 GIQFMLADMAMELEAARQMVYVAA-----AKSERGDADLS-FFGAAAKCFASDVAMKVTT 344 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 +A++ +GG+GY + + R R++ I G+ + + L KG Sbjct: 345 DAVQLLGGAGYTRDFPLERMMRDAKITQIYEGTNQVQRIVMARQLLKG 392 >gi|107021888|ref|YP_620215.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116688836|ref|YP_834459.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105892077|gb|ABF75242.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116646925|gb|ABK07566.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 395 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L+ +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|110835600|ref|YP_694459.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110648711|emb|CAL18187.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 604 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 44/306 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + + + LTE + GTD+ + ++ DG Y +SG K F+SS D I Sbjct: 153 PLTEGTWGGTMCLTEPQCGTDLGQVKTKADPQQDGSYKISGTKIFISSGDHDLTENIIHI 212 Query: 245 MLAQV----EGRVGC--FLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 +LA++ +G G F+VP+ L G NG+ L+ K+G +++AT + F G Sbjct: 213 VLARLPDAPKGTKGISLFIVPKYLPGKIGEHNGVSCGSLEKKMGIKASATCVINFDEATG 272 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH----VSG- 346 FL+G + G +E M +++SA + + V+ AE A+ YA+ R +SG Sbjct: 273 FLIGPEH---GGLECM--FTFMNSARIGTAMQGVAHAERSYQGALPYAKERKSMRALSGK 327 Query: 347 -------------GILIDQPVMKRAIAD--IALDIAAATALSFRLANSF-DEAKSRSEEA 390 G + + ++AIA+ A+ AA +A D+ + Sbjct: 328 KEPDAIADSLIHHGDVRRMLLKQKAIAEGGRAMIYYAAQYADNMIAGMLEDDMEKYDHWD 387 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + PI K + + E M+ GG GYI+E + + R++ +++ G+ Sbjct: 388 SELGFLTPILKGFLTEKGLEAANEGMQVFGGHGYIKEHGMEQIARDARISTLYEGTTGIQ 447 Query: 451 VLDVLN 456 LD+L Sbjct: 448 ALDLLG 453 >gi|289663077|ref|ZP_06484658.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 382 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 123 FALTEPQSGSDASAMRCRAVKQADGSFFINGKKSWITSGPVAKYIVLFAVTEPDKGSRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G + + K+G R++AT E+EF++ ++ V E K + Sbjct: 183 TAFMVDTERAGFHRGKTEPKLGIRASATCEIEFAD---YVAQSDEVLGVEGEGFKTAMSV 239 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ V +A A + Y + R G + + + IAD+ + AA L Sbjct: 240 LDAGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A + + EAA A++ A W + +A++ GG GY +E + R Sbjct: 300 TLRAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLER 352 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 353 YFRDAKITEIYEGT 366 >gi|255535005|ref|YP_003095376.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae bacterium 3519-10] gi|255341201|gb|ACU07314.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae bacterium 3519-10] Length = 393 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 26/272 (9%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--FLV 258 GLTE G+D + + K D + ++G K F++ +S ++ G G Sbjct: 137 GLTEHNTGSDSGGMNTTAVKDGDD-WIINGAKNFITHAISGDIAVVMTRTGDKGAKNNST 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKI 314 +LE G G R +NK+G R++ T EL F N + D N V +G + MKI Sbjct: 196 AFVLEKGMA-GFSSGRKENKLGMRASETAELIFDN---IRVPDANRLGEVGSGFKQAMKI 251 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D +S++ + + +A A+ Y+ RH G + + +AD+A +I A+ Sbjct: 252 L---DGGRISIAALSLGIARGAYKAALKYSLERHQFGKPINQFQAINFMLADMATEIDAS 308 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L R +N + K ++E A A++ A C ++A A++ GG GY ++ Sbjct: 309 ELLIQRASNLKNAKKPMTKEGAMAKLYASEA---CVRIAN----NAVQIFGGYGYTKDFP 361 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 ++YR++ +I G+ L + + KG Sbjct: 362 AEKYYRDAKLCTIGEGTSEIQKLVIGREISKG 393 >gi|21231868|ref|NP_637785.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768004|ref|YP_242766.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|21113589|gb|AAM41709.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573336|gb|AAY48746.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] Length = 597 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGL--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRAISGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454 >gi|301167939|emb|CBW27525.1| isovaleryl-CoA dehydrogenase [Bacteriovorax marinus SJ] Length = 382 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 24/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D I ++ +K D Y L+G K W ++ +D + + G+ L Sbjct: 122 MGMSEPEYGSDAVGIQTKAEK-KDDHYLLNGTKMWITNAEYADVAYVYTRT-GKERKNLS 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 ++E G+ G + +K+G R++ T EL F N L+G+ S ++ Sbjct: 180 TFIVEKGA-EGFSIGKPIHKMGMRASPTGELVFDNCKVPHSALVGNEGDSI-----YHMM 233 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ ++++G+ + +A+A + YA R G L + ++++ IA++A + Sbjct: 234 KNLELERITIAGISLGIAQACVDQCVKYAGEREQFGKSLGNYQMIQKMIAEMATETEMMR 293 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +A +D+ K AA ++ P KMA + +A++ GG GY E + Sbjct: 294 RFLYTVAKEYDDGKKGPMVAAQVKLQIP-------KMATKIALDAIQLHGGYGYSREFPV 346 Query: 431 ARHYRESPANSILLGSGNAMVL 452 R R++ N I G+ M++ Sbjct: 347 ERMMRDNKLNEIGAGTNEVMIM 368 >gi|183221848|ref|YP_001839844.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911919|ref|YP_001963474.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776595|gb|ABZ94896.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780270|gb|ABZ98568.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 584 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 57/293 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL-- 257 + LTE G+D+ ++ + K DG Y L+G K F+S GC L Sbjct: 186 MSLTEPDFGSDLNSVRTVAIKQEDGSYRLTGTKRFISQ----------------GCGLGD 229 Query: 258 VPRLL----EDGSPNG--------------LCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 P LL G P+G + ++ K+G + T E+ + N++G +L Sbjct: 230 YPALLLTLARTGKPDGGARGLSVFLVKSSDITVAGIEKKMGLHGSPTCEIVYENSYGEIL 289 Query: 300 GDLNVS-TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 G+ + T M + L SA G + E++ YA R+ G + + P + Sbjct: 290 GEEGLGLTRYTAGMTNFMRLVSASGGCGGGAAAYFESLKYANERNQFGKPIFEIPAVFEM 349 Query: 359 IADIALDIAAATALSFRLANSFDEAK----------------SRSEEAAY----ARIMAP 398 + I + A L+ A D + + E+ Y A I+ P Sbjct: 350 VHKIKRETNAMRLLTLETARVIDMYQHHQIRLEKQGLPDRDIRKDEKVKYWSTLASILTP 409 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I KY+ + + A++ GG+GY E+ I+R +R+S N+I G+ V Sbjct: 410 IAKYYSSEEGHKCTSIAVQVFGGAGYTEDYDISRMFRDSRINTIYEGTSQIHV 462 >gi|167624357|ref|YP_001674651.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354379|gb|ABZ76992.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length = 596 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 42/324 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE GTD+A + ++ S+G + ++G K F+SS D ++LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP++L +DGS N L L++K+G N+T + F G L+G+ + Sbjct: 222 GVKGISLFVVPKVLINDDGSLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350 + M L + + ++ A+ YA+ R + IL+ Sbjct: 282 QGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRALSGVKQAAQAADSILV 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWC 404 V + ++ A + AL + A DEA+ S + A + PI K + Sbjct: 342 HGDVRRMLLSQKAFN-EGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFV 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 +A + GG GYI E + + R+S I G+ LD++ L +K Sbjct: 401 TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKA 460 Query: 462 TNL---FEQLFSTLEQDLGSSGKK 482 L EQ+ +++++G+ K Sbjct: 461 QTLQLWSEQVKLLIQRNMGNDAMK 484 >gi|171685065|ref|XP_001907474.1| hypothetical protein [Podospora anserina S mat+] gi|170942493|emb|CAP68145.1| unnamed protein product [Podospora anserina S mat+] Length = 461 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 24/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ ++ +++ DG Y L+G K W + P +D I+ A+ G + Sbjct: 196 LAMSESGSGSDVVSMRTRAKEV-DGGYVLNGSKMWITNGPDADIVIVYAKTVPDGGSKGI 254 Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 ++E G C ++L +K+G R + T EL F N F +LG +N G V + Sbjct: 255 TAFIVETDKAEGFECLRKL-DKMGMRGSNTGELVFENVFVPKENVLGKVN---GGVRVLM 310 Query: 314 ILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L+ ++S M+ +L A+ YA R G + M+ +AD+ + A+ Sbjct: 311 EGLDLERLVLSAGPLGLMQAALDVALPYAHGRKQFGTPIAQFQFMQGKLADMYTKLQASR 370 Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ A + DE A R+++ A A + A C +A++ +GG GY EE Sbjct: 371 AYTYATAKAVDEQADIRTQDCAGAILYAAERATECA-------LDAIQILGGMGYTEEMP 423 Query: 430 IARHYRESPANSILLGSGNAMV 451 +R R++ I G+G + V Sbjct: 424 ASRILRDAKLYEI--GAGTSEV 443 >gi|170050078|ref|XP_001859196.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167871659|gb|EDS35042.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] Length = 359 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 21/253 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D+AA++++ + DG + L G K W S+ + + I+ A V + + Sbjct: 101 LSEADAGSDVAALSTRAVEDGDG-FVLHGTKAWVTSALEAKSGIIFATVNPELKYKGITA 159 Query: 261 LLED-GSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 L D GL R + K+G R+++T V++ SN G + G ++ ++ Sbjct: 160 FLVDFEKAQGLTIGRPEEKLGIRASSTCNLILENVKIPKSNLLGTIGGGFRLAMEQLDRA 219 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ + SL EAI YA++R G L+ PV++ IA++A+ I ++ L Sbjct: 220 RIGI----ASQALGIAQASLEEAIAYAKQRIAFGEPLLKLPVVRTRIAEMAVRIESSRLL 275 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D + ++ + A+ +A T + + +GG GY+++ R Sbjct: 276 VRKAATEIDRQRPATKSCSMAKWVAGETATFAAH-------NCQQIMGGMGYVKDLPAER 328 Query: 433 HYRESPANSILLG 445 YR++ I G Sbjct: 329 LYRDARITEIYGG 341 >gi|221134901|ref|ZP_03561204.1| probable acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999] Length = 586 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 41/293 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE GTD++ ++++ +DG Y ++G+K F+++ D ++LA+ Sbjct: 162 MNLTEPHAGTDLSLLSTKAVPQNDGSYAITGNKIFITAGDHDWSENIIHLVLARLPDAPK 221 Query: 249 -VEGRVGCFLVPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+G + FLVP++ + D GSPN + ++ K+G +++ T + + GFL+G+ Sbjct: 222 GVKG-ISLFLVPKINVNDDGTLGSPNAVSVGSIEKKMGLKASPTCVMNYDEAQGFLIGEE 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGI---------LI 350 + + M + + S A+ YA R S GI +I Sbjct: 281 HSGLACMFTMMNDARFQVGLQGLGIGEASYQGALEYAVERLQSRAPQGIQAPDKKADPII 340 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEA-AYARIMAPITKY 402 QP ++R + ALS A D EAK+ +E AY + PI K Sbjct: 341 FQPDVRRMLLTQRSLTEGCRALSMLYAKFMDIEKYATGEAKTNAEVVIAY---LTPICKA 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + MA V ++ GG GYI E + ++ R++ + G+ D++ Sbjct: 398 FFTDMATEVSNYGIQIYGGHGYIREWGMEQYVRDTRIAQLYEGTNGIQAADLI 450 >gi|328709833|ref|XP_001947176.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like [Acyrthosiphon pisum] Length = 422 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 26/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 L+E G+D A+ + +K D Y W +S ++ F + A + G CF Sbjct: 164 LSEPSSGSDAFALKTTAKKDGDHYYINGTKMWISNSDIAGIFYVFANTDPSKGHKGVTCF 223 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +V R E G + ++K+G R++ T L F N + N+ E KI I Sbjct: 224 IVEREQE-----GFSVAKKEDKLGMRASGTCVLHFDNV---KVHKDNIVGKIGEGYKIAI 275 Query: 317 -YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +L+ + + V +A+ I Y R G + D M+ IA ++ A Sbjct: 276 TFLNEGRIGIGAQMVGIAQGCLDHTIPYTLERKQFGSSIFDFQSMQHQIARAVTEVETAR 335 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + + A D +EAA A KY+ ++A V + ++ +GG G+ + Sbjct: 336 LIVYNTARLVDAGLPFIKEAAMA-------KYYASEVAGKVTSVCIDWMGGVGFTTDYPQ 388 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + YR+ I G+ N + + ++K Sbjct: 389 EKFYRDCKVGPIYEGTTNMQLSTIAKFIKK 418 >gi|323691729|ref|ZP_08105989.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673] gi|323504207|gb|EGB20009.1| acyl-COA dehydrogenase [Clostridium symbiosum WAL-14673] Length = 638 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ + GLTE G+D A T + Y L+G K F++ +P +D +++ A Sbjct: 113 PLARGEKIGAFGLTEPNAGSD-AGGTETTAVLKGDYYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F++ + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWEGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q ++ +AD+ Sbjct: 229 GEGFKIAMATLDGGRIGIASQALGIAQGAYENALEYSKERIQFGKPICQQQIVSFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A K + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHVPYGMESAMA-------KQYASDIALEVTNDALQIFGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ +I G+ Sbjct: 342 GYLKGMEVERAYRDAKITTIYEGT 365 >gi|300727789|ref|ZP_07061171.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14] gi|299774942|gb|EFI71552.1| acyl-CoA dehydrogenase family protein [Prevotella bryantii B14] Length = 510 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVGCF 256 + + LTE G+D+ + + + DG + L+G K F+++ SD ++LA+ EG Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATQDEDGTWRLNGVKRFITNGDSDIHLVLARSEEGTHDGR 230 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + + D G+ + +++K+G + T EL + N L GD + G ++ + L+ Sbjct: 231 GLSMFIYDKRDGGVDVRHIEHKLGIHGSPTCELTYKNAKAELCGDRKL--GLIKYVMALM 288 Query: 317 ---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A SV + + EA+ YA+ R G +I P + ++ + + A +L Sbjct: 289 NGARLGIAAQSVGVEQEAYNEALAYAKERQQFGKKIITFPAVYDMLSRMKAKLDAGRSLL 348 Query: 374 FRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEAM 416 + A D K+ R E Y+R+ P+ K + A +A+ Sbjct: 349 YMTARYVDIYKALEDISRERKLTPEERKEMKLYSRLADAFTPLAKGTNSEYANQNAYDAV 408 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 GGSG+I E R R++ SI G+ V+ + + GT L Sbjct: 409 SVHGGSGFIMEYKSQRLLRDARIFSIYEGTTQLQVVAAIRYITNGTYL 456 >gi|194366550|ref|YP_002029160.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194349354|gb|ACF52477.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 596 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 50/297 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPPGA 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KGISLFVTPKFKVDRDGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354 P + ++ + +++A + V + L+E A+ Y+R R +SG D+P Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRSLSGAKFPDKPAD 339 Query: 355 -------MKRAIADIA--------LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 ++R + I L + AAT + +A+ D+A R + PI Sbjct: 340 PILVHPDVRRMLLTIKSLVEGSRLLALHAATLID--VAHHADDAAERERADTLVSFLTPI 397 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +K + A++C GG GYI E + + R++ ++ G+ LD++ Sbjct: 398 SKACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454 >gi|111020601|ref|YP_703573.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110820131|gb|ABG95415.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 399 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 14/269 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D +A ++ +G Y ++G KWF++ ++D I+LA VE + Sbjct: 121 VAISEANAGSDFSAASTTATPDGNGGYIINGEKWFVTVGDVADYLIVLANVEPEHAATIF 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316 L++ +P G+ + + E F N +G+ V G D+ Sbjct: 181 --LIDVDTP-GVKIKHIPRYTHTFVYEHPEFTFENV---RVGEDAVLGGIGQGHDLTRDW 234 Query: 317 YLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +M ++ +L A+ +AR R G LI++ +++ IAD +DI AL Sbjct: 235 FTEERLMIGARTIGAAERALTLAVDWARERVQGGEPLINRQLIQGMIADSVVDITTNRAL 294 Query: 373 SFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + ++A FD+A + A K + + V A++ GG GYI + + Sbjct: 295 THQVAWEFDQADPHDADLRKTLHAKAATVKLAASEASNRVADRAVQIFGGRGYIRDYPVE 354 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R +RE + I G+ L + N K Sbjct: 355 RLWRELRVDRIWEGTSEIQRLVIANEANK 383 >gi|261251347|ref|ZP_05943921.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891] gi|260938220|gb|EEX94208.1| putative acyl-CoA dehydrogenase [Vibrio orientalis CIP 102891] Length = 389 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 30/278 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + D Y L+G K W + P +D ++ A+ E G + Sbjct: 130 LAMSEPNAGSDVVSMQLKATLNGD-YYLLTGSKMWITNGPDADVIVVYAKTEPDKGSHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + +G + + +K+G R + T EL F N +LG+LN + +K+L Sbjct: 189 TAFIVEKKFSGFSHAQKLDKLGMRGSNTCELVFDNCPVPKENILGELN------QGVKVL 242 Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++ +G M+ L I Y R G + + +++ +AD+ AA Sbjct: 243 MSGLDYERVVLAAGPLGIMQACLDIVIPYIHDRKQFGRSIGEFQLVQAKVADMYTRTNAA 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D ++ ++AA A + +C ++A + +A++ +GG+GYI E Sbjct: 303 RAYLYTVAKACDNKQTTRKDAAGAIL-------YCAELATQLALDAIQLLGGNGYINEFP 355 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R R++ I G+G + + +L G LFE+ Sbjct: 356 AGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|241763455|ref|ZP_04761509.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241367397|gb|EER61718.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 598 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 62/359 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K + PK+ S E+ T + LTE GTD+ + ++ + +DG Y Sbjct: 145 TEEQKKIYLPKLTSGEWTGT-------------MCLTEPHCGTDLGLLRTKAEPQADGTY 191 Query: 227 CLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC-----FLVPRLLED-----GSPNGL 270 ++G K F+S+ D ++LA++ + VG F+VP+ + G N + Sbjct: 192 KITGAKIFISAGEHDMTSNIVHLVLARLPDAPVGSKGISLFVVPKFKVNADGSLGERNAI 251 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 L++K+G NAT ++ G ++G N + + +++A + V + Sbjct: 252 YCGGLEHKMGIHGNATAQIVIDGATGTMVGQPNKGLA-----AMFVMMNAARLGVGNQSL 306 Query: 331 SLAE-----AIHYARRR----HVSGGILIDQP--------------VMKRAIADIALDIA 367 L E A+ YA+ R +SG D+P + +A A+ + Sbjct: 307 GLTEVAYQNALAYAKDRIQMRSLSGTKAKDKPADPIIVHPDVRKMLLTAKAYAEGGRALQ 366 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AL S + K R E ++ PI K + + GG GYI+E Sbjct: 367 CFCALLLDKELSHPDEKVRKESGEMLALLTPIVKAFITDNGYEAATMCQQVFGGHGYIKE 426 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--FEQLFSTLEQDLGSSGK 481 + ++ R++ N I G+ LD+L L G L F +L L ++ G + K Sbjct: 427 WGMEQYVRDARINMIYEGTNTIQSLDLLGRKILGNNGATLKKFGKLVGQLVEEEGVNEK 485 >gi|219123841|ref|XP_002182225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406186|gb|EEC46126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 437 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSS------PMSDAFIMLA 247 +V G+ ++E GTD+ + + I G + L+G K ++++ D F++ A Sbjct: 161 TVVGGMCMSEPNAGTDVLGMKTNATAIEGGGGWKLNGTKMWITNGTLDGRTTGDIFLVYA 220 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + G L ++E P Q++ +K+G R++ T EL F + ++G++N Sbjct: 221 RT-GPAKTDLTQFVVEKNMPGFSLGQKIVDKLGMRASMTAELVFEDVILSHDHVVGEVNE 279 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIA 363 +T + + + A M++ R S+ E YA R G L + ++R IA+ Sbjct: 280 ATLCMMRNLEIERIGLAAMALGIARRSIDEMKRYALERQAFGARNLFEFGQIQRLIAESY 339 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A + +ANS D K+ + + A TK +C KM+ V A++ +GG G Sbjct: 340 AEYMAGRCYVYGVANSLDLNKAGNG------LDADGTKLYCAKMSKEVADRAIQVMGGYG 393 Query: 424 YIEERSIARHYRES 437 Y+ E + R +R++ Sbjct: 394 YVGEYKVERLWRDA 407 >gi|192290931|ref|YP_001991536.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192284680|gb|ACF01061.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 375 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + + ++ D Y ++G K F++S + I+L V G+ G Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R+++K+G S+ T +L F++ + DL + E + Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAA + A+ + EA+ A++ A T A AV + A++ +GG GY++ Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLFASET-------AEAVCSSAIQTLGGYGYLK 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365 >gi|109897274|ref|YP_660529.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109699555|gb|ABG39475.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 385 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 36/269 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ + K+ Y L+G K F+S + +D +++A+ G + F Sbjct: 124 LTEPGSGSDAAALRTSA-KLDGDDYVLNGSKMFISGAGETDVLVVMARTGGEGPKGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGPV 309 LVP G+ Y + + K+G + T + F N + LLGD + + + Sbjct: 183 LVP-----ADAQGITYGKAEEKMGWNAQPTRLITFDNVRVSHINLLGDEGQGFSFAMQGL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I A S+ + +L A Y + R G L ++ +AD+A ++ AA Sbjct: 238 DGGRVNI----ATCSIGTAQQALNTATAYMKERTQFGKPLAAFQALQFKLADMATELVAA 293 Query: 370 TAL----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + +F+L N E RS A A+ A + C +A++ GG GYI Sbjct: 294 RQMVRLAAFKLDNKDPE---RSAYCAMAKRFATDIGFEVCN-------QALQIHGGYGYI 343 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDV 454 +E + RH R+ + IL G+ M + V Sbjct: 344 QEYPLERHVRDVRVHQILEGTNEIMRMIV 372 >gi|295696335|ref|YP_003589573.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411937|gb|ADG06429.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 381 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFLV 258 LG+TE G+D+A++ + ++ D Y L+G K F++ S ++ + A+ + G V Sbjct: 124 LGVTEPDAGSDVASMRTVARREGDH-YVLTGSKMFITGGASADYVCVAAKTDPSAGHRGV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLNV 304 + + G R K+G R++ T EL E + F +++ + Sbjct: 183 SMFIVEAGMPGFSVGRTLRKLGWRASDTAELILDGVQVPAENLVGEENQGFRYIMINFQW 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +I++ A+ SV+ +L +A+ Y+R R G + ++ + D+A+ Sbjct: 243 E-------RIML----ALSSVAAAEKALEDALRYSRERTQFGRPIGTFQALRHKMVDMAV 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI A +L++R + +R E+ A MA K + +M V A++ GG+GY Sbjct: 292 DIEKARSLTYRALYLY----ARGEDVTVAASMA---KAYAGEMVNRVTDAALQIHGGNGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452 + E + R++R++ SI G G ++ Sbjct: 345 MMEYPVQRYWRDARIMSI--GGGTTQIM 370 >gi|313500924|gb|ADR62290.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 42/295 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248 + LTE G+ +A I ++ + DG Y L G+K F+S +S+ + +LA+ Sbjct: 162 MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPP 221 Query: 249 -VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ + DGS N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ------- 352 G + + M + + +V S ++ YAR+R G L D Sbjct: 281 GQPHQGLACMFQMMNEARIGVGMGAVMLGYASYLYSLEYARQR--PQGRLPDSKDPLSPA 338 Query: 353 -PVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 P++ ++A + A D+ A F + ++ SR++ A ++ P+ Sbjct: 339 VPIIAHTDVKRMLLTQKAYVEGAFDLGLYAARLFDDTQTANDETSRNQAQALLDLLTPVV 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 K W A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 399 KSWPSTFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 453 >gi|293605739|ref|ZP_06688115.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292815864|gb|EFF74969.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%) Query: 84 LHAYGPGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLY 141 L P ERWD+ +PA + + L WD + V + Sbjct: 19 LERLAPNAERWDREHHYPADAIQEMAQLGFFGMLVPEEWDGNDSGYV---------SYAV 69 Query: 142 LMAQLEAGHLMSPSVTSA-SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 + ++ AG ++ S + VA M + D F R P+ + G Sbjct: 70 ALEEIAAGSGACSTIMSVHNSVACMPILKFGNDAQKDQFLR--------PLASGAHIGGF 121 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG-- 254 LTE + G+D +++ ++ ++ + Y L+G K F++S S +++ V G+ G Sbjct: 122 ALTEPQAGSDASSLRTRARRDGED-YILNGAKQFITSGKSGQTVIVFAVTDPDAGKRGIS 180 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTG 307 F+VP G R+++K+G ++ T + F + + LG ++ Sbjct: 181 AFIVPT-----DTPGYQVLRVEDKLGQHASDTCHIAFEDMRIPAAYRLGAEGEGYKIALA 235 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +E +I I A SV R + A YAR R G + D + +AD+A I Sbjct: 236 NLEGGRIGI----ASQSVGMARAAFECARDYARERQAFGKPIFDHQAVAFRLADMATQIH 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + A + E A + A + K + +MA V + A++ +GG GY+++ Sbjct: 292 AARQMVL-------HAAALREAGRPALMEASMAKLFASEMAEKVCSAAIQTLGGYGYLKD 344 Query: 428 RSIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 345 FPVERIYRDVRVCQIYEGTSD 365 >gi|227498693|ref|ZP_03928837.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21] gi|226904149|gb|EEH90067.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21] Length = 377 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 46/276 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255 LTE G+D ++++ K D Y L+G K F+++ ++D+F++ A G C Sbjct: 123 LTEPDAGSDAGGVSTKAVKEGDH-YVLNGSKVFITNGGIADSFLVFANTRKTGGIRGLTC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP+ G+P G R ++K+G R + T EL +L D+ V E M++ Sbjct: 182 FIVPK----GTP-GFSVGRKEDKMGIRPSNTCEL--------ILEDVVVP----ESMRVG 224 Query: 315 ---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 + LDSA V+ + V +A+ A HYAR R G + +++ +A Sbjct: 225 REGQGFRIAMQTLDSARPFVASVAVGVAQSALDIAAHYARERRQFGQPISSFQLIQGMVA 284 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ + A + + D+ EAA ++K + +A V +A++ +G Sbjct: 285 DMAMKVHGARLMVQQACWMRDQGLEFGMEAA-------MSKCFASDVAMEVTTDAVQIMG 337 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 G GY+++ + + R++ I G+ L + N Sbjct: 338 GYGYMKDYPMEKKMRDAKILQIYEGTNQIQRLVIAN 373 >gi|288554424|ref|YP_003426359.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288545584|gb|ADC49467.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 20/277 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 PM + GLTE G+D A + + I DG Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAARMKTTA--IEDGDHYVLNGSKIFITNGGIADIYIVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + + G + + K+G RS+ T E+ F + + N+ Sbjct: 171 VTDPEARHKGTTAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENMLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 E K+ ++ LD ++ V +A+ A+ YA+ R G + Q + +AD Sbjct: 228 EGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVGYAKERKQFGKPIGAQQGIGFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I A+ L+++ A E S +E+A +++ A T A V EA++ GG Sbjct: 288 MATKIEASRLLTYQAAWRESEGVSYGKESAMSKLFAGDT-------AMDVTVEAVQVFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GY ++ + R+ R++ I G+ L + +L Sbjct: 341 YGYTKDYPVERYMRDAKITQIYEGTNEIQRLVISKML 377 >gi|206973583|ref|ZP_03234501.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|206747739|gb|EDZ59128.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] Length = 569 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 38/315 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFE 466 L V +L K E Sbjct: 403 LTVAKMLMKQVEQIE 417 >gi|332300789|ref|YP_004442710.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707] gi|332177852|gb|AEE13542.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707] Length = 576 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 33/301 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + +D + L+G K F+++ S+ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYNEADQQWYLNGVKRFITNGDSNIHLVLARSEEGTKDA 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL F + L G+ + G + ++ Sbjct: 231 RGLSMFIYDAKKGGVTVRRIENKMGIKGVPTCELVFKDAPAELCGERRL--GLIR--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + + V ++EA + YA RH G + P + +A I A Sbjct: 287 SLMNGARLGIMAQAVGISEAAYREAKAYAADRHQYGHAIDRFPAVYEMLALIRAKADATR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 A + + D K+ R E+ Y+R+ PI K ++A + Sbjct: 347 AHLYETSRFVDMYKAYDDIARERKLTPEERKEQKYYSRLADAYTPIGKGMSTELANQNVY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE 473 + ++ GGSGY+++ + R YR+ +I G+ V+ + + GT F+ LE Sbjct: 407 DCIQIYGGSGYMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHVTTGT-----YFARLE 461 Query: 474 Q 474 + Sbjct: 462 E 462 >gi|229590490|ref|YP_002872609.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|229362356|emb|CAY49258.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA----FIM 245 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + F + Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGVVIVFAV 169 Query: 246 LAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 V G+ G F+VP SP G R+++K+G ++ T ++ F +N G Sbjct: 170 TDPVAGKRGISAFIVP----TDSP-GYTVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E ++ I A SV R + A YAR R G +I+ + Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERESFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D K EA+ A++ A +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKPALVEASMAKLFA-------SEMAEKVCSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|221065050|ref|ZP_03541155.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220710073|gb|EED65441.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 598 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/401 (22%), Positives = 166/401 (41%), Gaps = 68/401 (16%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL TP K + K+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAYGTPEQKKIYLGKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLV 258 D+ + ++ + +DG Y ++G+K F+S+ D ++LA++ + F+V Sbjct: 175 DLGMLRTKAEPQADGSYKITGNKIFISAGEHDFTSNIVHLVLARLPDAPPGSKGISLFVV 234 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + G N + L++K+G NAT ++ G L+G+ N Sbjct: 235 PKFKVNADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGEPNKGL-----QA 289 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP---VMKRAIAD 361 + + +++A + V + L E A+ YA+ R +SG D+P ++ Sbjct: 290 MFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGVKAKDKPADPIIVHPDVR 349 Query: 362 IALDIAAATALSFRLANSF-----------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 L A A A R ++F + K R + ++ PI K + Sbjct: 350 RMLLTAKAYAEGGRALSTFCGLLLDKELHHPDEKVRKDSGELVALLTPIVKAFITDNGWT 409 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL--F 465 + + GG G+I+E + + R++ N I G+ LD+L L +G L F Sbjct: 410 ATTLSQQVFGGHGFIKEWGMEQFVRDARINMIYEGTNGIQALDLLGRKILGNQGATLKKF 469 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 +L + L ++ G + K ++ I++ E + +F TE Sbjct: 470 GKLIAQLVEEEGVNEK--MSEFITPIAVLGEQ--MTKFTTE 506 >gi|115492645|ref|XP_001210950.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114197810|gb|EAU39510.1| acyl-CoA dehydrogenase, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 439 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 19/279 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T L+E G+D A+ ++ +K +DG Y ++G K W +S + FI+ A Sbjct: 168 PQLATGTVGSFCLSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGVFIVFAN 226 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + + G + + K+G R+++T L F + ++ N+ Sbjct: 227 LNPSAGYKGITAFIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---VIPKANLLGEE 283 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + K I L+ + ++ LA A + R G ++ + M+ IA Sbjct: 284 GQGYKYAINLLNEGRIGIAAQMTGLALGAWENAASYVWNDRKQFGQLIGNFQGMQHQIAQ 343 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +IAAA AL + A + + ++AA A++ + ++A V + A+E +GG Sbjct: 344 AYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVASSAVEWMGG 396 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G++ E + +R+S +I G+ N + + LL+K Sbjct: 397 MGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435 >gi|317470438|ref|ZP_07929826.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316901953|gb|EFV23879.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 44/267 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSD--AFIMLAQVEGR---V 253 GLTE G+D + +K D Y L+G K F + P++D A L + E + + Sbjct: 124 FGLTEPNAGSDAGGCVTVAEKDGD-EYILNGMKCFNTNGPLADYTAVYALTEPEKKAKGL 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF+V + G+P G ++++K+G RS E+ +L ++ V P E+M Sbjct: 183 SCFVVKK----GTP-GFSVGKVEDKMGIRSAQVSEM--------ILENVRV---PAENMI 226 Query: 314 I---------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + + LD + V+ + +AE A Y + R G L + + Sbjct: 227 VPSGDGFKLAMKTLDGGRIGVAAQGLGIAEGAFEIAKEYLKTREQFGKPLYRNQYLAFKM 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++I AA + ++ A E + S AA A KY C + A V EA++ + Sbjct: 287 AELEMEIDAAKLMLYKAAADKQEGRRYSIPAAKA-------KYLCTEAAMHVTTEAVQML 339 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG+GY++ + R R++ I G+ Sbjct: 340 GGNGYMKGYHVERMMRDAKITQIYEGT 366 >gi|225024858|ref|ZP_03714050.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC 23834] gi|224942387|gb|EEG23596.1| hypothetical protein EIKCOROL_01746 [Eikenella corrodens ATCC 23834] Length = 587 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 46/292 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEG--- 251 + L+E + GTD++ + ++ DG Y +SG K F++ +++ I +LA++ G Sbjct: 161 MNLSEPQAGTDLSQVATKAVPQEDGSYRISGQKTFITWGEHELTENIIHLVLARLPGTTS 220 Query: 252 ---RVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ + DGS NG+ +++K+G ++ T ++F G+L+G Sbjct: 221 GIKSLSLFIVPKYKIKPDGSIGERNGVSATAIEHKMGIHASPTCVMQFDEAEGYLIGKAG 280 Query: 304 VSTGPVEDMKILIYLDSAI------MSVSGMRVSLAEAIHYARRRH--VSGG-------I 348 + L+Y+ + + + + G V+ A H + G Sbjct: 281 ---------RGLLYMFTMMSHARLGVGIEGHAVAEAAYQQALAYAHERIQGSAPDGTPLT 331 Query: 349 LIDQPVMKRAI----ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI--MAPITKY 402 +I P + R + A IA A + L S + +++AA R+ + PI K Sbjct: 332 IIHHPDVARMLLVQKATIAAQRALYLQAAAALDASHQHPEPAAKKAAKGRLDYLIPIVKA 391 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 WC + AM+ GG+GYIEE IA+ R+ +I G+ D+ Sbjct: 392 WCSDNGTVLANLAMQVFGGAGYIEETGIAQLVRDVRITAIYEGTNGVQAADL 443 >gi|297585455|ref|YP_003701235.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus selenitireducens MLS10] gi|297143912|gb|ADI00670.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens MLS10] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 28/270 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VG 254 GLTE G+D A + + ++ D Y L G K ++++ +D +++ A + V Sbjct: 124 GLTEPGAGSDAAGMKTTAKRDGDD-YILDGSKIYITNGGEADIYVVFALTDPEKKHKGVT 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V + +E G + + K+G RS+ T+E+ F G + N E KI Sbjct: 183 AFIVEKGME-----GFTMGKKERKMGIRSSPTLEIIFD---GVRVPKENRLGEEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A EA+ YA+ R G + Q + +AD+A + A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDEAVAYAKERKQFGKPIGAQQGIGFKLADMATKVEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L+++ A E KS + +A ++K + A V EA++ GG GY ++ Sbjct: 295 SRLLTYQAAWLESEGKSYGKASA-------MSKLFAGDSAMEVTTEAVQVFGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R+ R++ I G+ L + +L Sbjct: 348 PVERYMRDAKITQIYEGTNEIQRLVISKML 377 >gi|50084855|ref|YP_046365.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|15812037|gb|AAC37155.2| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49530831|emb|CAG68543.1| acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 43/310 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y ++G K F+S+ D I+LA++ Sbjct: 166 LTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGT 225 Query: 253 --VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ D N + +++K+G NAT + F GFL+G N Sbjct: 226 KGISLFIVPKFNVDEFGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQP 353 + + +A+ ++ +++ A+ YAR R GI +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASQIAFQGALEYARDRLAMRALSGIQYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD---EAKSRSEEAAYARIMA---PITKYWCCKM 407 ++ + AL++ LA D + K ++ A ++A PI K + + Sbjct: 346 AVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQL 468 + T+L +Q Sbjct: 466 KNMTDLIDQF 475 >gi|311108082|ref|YP_003980935.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310762771|gb|ADP18220.1| acyl-CoA dehydrogenase, N-terminal domain protein 16 [Achromobacter xylosoxidans A8] Length = 386 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 38/322 (11%) Query: 149 GHLMSPSVTSASMV-ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 G + S +TSA V + M TP + REY AP + +G++E Sbjct: 76 GEVRSSGLTSAIGVQSTMCTPALAHH-GSDALKREY----LAPTIAGDLVGCIGVSEASA 130 Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------CFLVPR 260 G+D++ I + ++ D Y ++G K W + D +L G +VP Sbjct: 131 GSDVSRIKTWARRDGDD-YIINGSKMWITNGVQGDWICLLCNTSQEGGPHKNKSLIIVPL 189 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 SP G+ R +K+ R++ T EL F SN G ++ + Sbjct: 190 ----KSP-GVSVSRKLDKLVLRASDTAELFFDDVRVPASNCIGEENMGFIYQMEQFQEER 244 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + A S+ M ++ E I YA +R V GG ++ V+ +A++ +I A +L Sbjct: 245 MFV----AARSMRSMERAIEETIEYAGQRQVFGGTILSNQVVYHKLAEMQTEIQALRSLL 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R + + + + ++ A + KY+ K++ + E ++ GG G + E I+R Sbjct: 301 YRAIDLYMDGQDIAQ-------FASMAKYYAGKLSMKIPNECLQFWGGQGVMNENWISRA 353 Query: 434 YRESPANSILLGSGNAMVLDVL 455 YR+ +I G N ++L+V+ Sbjct: 354 YRDLRQTAI-GGGANEIMLEVI 374 >gi|195395796|ref|XP_002056520.1| GJ10995 [Drosophila virilis] gi|194143229|gb|EDW59632.1| GJ10995 [Drosophila virilis] Length = 406 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D Y L+G K W ++ ++A ++ A + + Sbjct: 146 FALSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNAFEAEAAVVFATTNKQLKHKGI 204 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301 F+VP+ ++ G + ++K+G R ++T +L F + FGF + Sbjct: 205 SAFIVPKGIK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKESLLGETGFGFKIAM 259 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + G I + S + ++ + SL A+ YA++R G + +++ IAD Sbjct: 260 QTLDAGR-------IGIASQALGIA--QASLELAVDYAQKRQAFGKPISKLQAIQQKIAD 310 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 ++L + +A L++R A D ++EAA A++ A C + ++ +GG Sbjct: 311 MSLAVESARLLTWRAAWLKDNKLPYTKEAAMAKLAASEAATLCAH-------QCIQVLGG 363 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY+ + + RHYR++ I G+ Sbjct: 364 MGYVTDMAAERHYRDARITEIYEGT 388 >gi|104784423|ref|YP_610921.1| polyketide synthase [Pseudomonas entomophila L48] gi|95113410|emb|CAK18138.1| putative polyketide synthase [Pseudomonas entomophila L48] Length = 669 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 43/287 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 TE G+D +I + G L+G K W S + + AQ Sbjct: 123 FAFTEPVAGSDARSIRTTATSQGAGYQRLNGQKAWIGSGAWAGVTTVFAQ---------- 172 Query: 259 PRLLEDGSPNGLCYQRLKN------------KIGNRSNATVELEFSNTF---GFLLGDLN 303 +L E G P+G+ +K +G R ++F + +LLG N Sbjct: 173 -QLDEAGRPSGISGYIVKAGTPGLEQGPEALTMGMRGMIQNIVDFKDAVVSERYLLGTRN 231 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + + + L A +S+ GM+ + YA RR +S G+L+D PV + ++D++ Sbjct: 232 AGMDIAQQIMMHARLGIAGLSLGGMKRCAQLMLRYAERRRISTGVLLDNPVTQARLSDVS 291 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEA----MEC 418 I A L F + D+ I P Y CK AP + EA + Sbjct: 292 AAITAVDTLVFSIGRLMDQ-----------HIGVPDEVYTACKSTAPELFGEATDHLTQL 340 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 +G GYIE + + R++ I G M + + + KG ++F Sbjct: 341 LGARGYIETNGVPQLLRDARILRIFEGPTETMNMYLGGRILKGADVF 387 >gi|27374374|gb|AAO01112.1| Arc42-PA [Drosophila pseudoobscura] Length = 405 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ + D Y L+G K W + + A ++ A + + Sbjct: 147 LSEPGNGSDAGAASTVATEKGDH-YVLNGTKAWITNGFEAGAAVVFATTNKQLKHKGISA 205 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+VP+ L+ G + ++K+G R ++T +L F + +LG+ P Sbjct: 206 FIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCEIPKDSMLGE------PGFGF 254 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD+ + ++G + + +A + YA++R G + +++ IAD++L + Sbjct: 255 KIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPISKLQSIQQKIADMSLAM 314 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D ++ ++EAA A++ A C + ++ +GG GY+ Sbjct: 315 ESARLLTWRAAWLKDNKQAYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVA 367 Query: 427 ERSIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 368 DMPAERHYRDARITEIYEGT 387 >gi|312222404|emb|CBY02344.1| similar to isovaleryl-CoA dehydrogenase [Leptosphaeria maculans] Length = 443 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 127/266 (47%), Gaps = 30/266 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +++ DG Y L+G K W + P + ++ A+ + + Sbjct: 177 LAMSEHSAGSDVVSMKTTAKEV-DGGYLLNGTKMWITNGPDAHTIVVYAKTQPDAASKGI 235 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + D + G + +K+G R + T EL F + F +LG LN +++L Sbjct: 236 TAFIVDTTTPGFSVTKKLDKLGMRGSNTGELVFEDVFVPRENVLGQLN------RGVRVL 289 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L A+ Y +R G + +++ +AD+ + A+ Sbjct: 290 MEGLDLERLVLSAGPLGLMQAALDNALPYTHQRKQFGIPIAHNQLVQGKLADMYTKLRAS 349 Query: 370 TALSFRLANSFDEAKS----RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + ++ +A + DE+ ++++ A A + + + A V A+A++ +GG GY+ Sbjct: 350 QSFTYAVARAVDESYQSPDVKTQDCAGAIL-------YAAERASEVAADAIQLMGGMGYM 402 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 E + R R++ I G+G + V Sbjct: 403 NEVPVGRILRDAKLYEI--GAGTSEV 426 >gi|300692218|ref|YP_003753213.1| dehydrogenase [Ralstonia solanacearum PSI07] gi|299079278|emb|CBJ51950.1| dehydrogenase [Ralstonia solanacearum PSI07] Length = 397 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 20/263 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPDHGSDPASMVTRAKKV-DGGYSLSGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFLVWAKLPDDNGEDQIRGFILERGWKGLSAPAIHGKVGLRTSITGEIVLDEVF- 232 Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILI 350 + + N+ G V +K L+SA ++ + AE+ + R++V G L Sbjct: 233 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLA 289 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +I RL DE + E + I K C A Sbjct: 290 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALD 342 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E + RH Sbjct: 343 IARMARDMLGGNGISDEFGVIRH 365 >gi|289647594|ref|ZP_06478937.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 2250] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 66/353 (18%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 G L D PV ++R + + A L + FD+ ++ E A Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384 Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 LD+L L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|239939873|ref|ZP_04691810.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239986358|ref|ZP_04707022.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] Length = 434 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVG--CFL 257 L+E G+D A++ ++ + D W ++D +LA+ VEG G FL Sbjct: 177 LSEPASGSDAASLRTKAVRDGDDWVITGTKAWITHGGVADFCTVLARTGVEGARGITAFL 236 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T +L F G +GD + I L Sbjct: 237 VP-----GDAEGLNAALPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIALS 288 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A A Sbjct: 289 ALDSGRLGIAACAIGVAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGRA 348 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S +AA A K +C A V +A++ +GG GY + + Sbjct: 349 LYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPVE 401 Query: 432 RHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 402 RLMREAKVLQIVEGT 416 >gi|154271889|ref|XP_001536797.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150408784|gb|EDN04240.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 428 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 45/256 (17%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 223 Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F++ R D P G +KNK R++ T G + + + PV + Sbjct: 224 GFIIER---DSCPPGTFETPMIKNKTALRASIT-------------GMIQMDSCPVPETN 267 Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357 +L L+SA + ++ G +L + I AR R+ G L+ ++++ Sbjct: 268 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLVRYQLVQK 327 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD A D A T + +A DE KS E M I K C A E Sbjct: 328 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 380 Query: 418 CIGGSGYIEERSIARH 433 GG+ +E I RH Sbjct: 381 IFGGNAVSDEYHIGRH 396 >gi|150395712|ref|YP_001326179.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium medicae WSM419] gi|150027227|gb|ABR59344.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae WSM419] Length = 593 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 100/450 (22%), Positives = 186/450 (41%), Gaps = 80/450 (17%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGER------WDKVEFHPAWHALLRRSIHDG 114 LGE ++ E R A+ L G G+R VE W L I G Sbjct: 31 LGEDLVDAILGEAGRFASEEVAPL---GDAGDRRGARLVGGTVETPEGWRDLYHNWIAGG 87 Query: 115 LHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPR 169 W+ P + H + A + + ++P++T ++ AL T Sbjct: 88 -----WNGLTAPEAYGGQNLPHMLHVAAMEMWNSGSMAFALAPTLTMGAIEALEKHGTEV 142 Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + + PK+ S E+ T + LTE G+D+ + ++ ++ DG Y + Sbjct: 143 LKSVFLPKMVSGEWMGT-------------MNLTEPHAGSDLGVLKTRAERCDDGTYRIF 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQ 273 G K F++ D ++LA++ + FLVP+ L +G + N L Sbjct: 190 GQKIFITWGEHDFTDNIVHLVLARLPDAPPGTKGISLFLVPKFLVNGDGSLGARNDLFCH 249 Query: 274 RLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 L++K+G + T + + + G+L+G+ N + M +++A ++V Sbjct: 250 SLEHKLGIHGSPTCTMIYGDGRFGAEKGAVGYLVGEENRGLACMFTM-----MNNARLAV 304 Query: 326 SGMRVSLAEA-----IHYARRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATA 371 V++AEA I YA+ R SG G+ +I+ P + R + + + A Sbjct: 305 GMQGVAIAEAATQKAIAYAKERRQGRAPGWSGEGMSPIIEHPDVARMLLTMKALTQGSRA 364 Query: 372 LSFRLANSFDEAK-SRSEEAAY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +++ A++ D A + EEA + + ++ PI K + V + ++ GG G+IE Sbjct: 365 IAYACAHAVDMAHFAEGEEARHWQERSSLLTPIAKSFATDAGVDVASLGVQVHGGMGFIE 424 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456 E AR+ R++ I G+ +D++ Sbjct: 425 ETGAARYLRDARIAPIYEGTNGIQAIDLVT 454 >gi|83952653|ref|ZP_00961383.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM] gi|83835788|gb|EAP75087.1| acyl-CoA dehydrogenase [Roseovarius nubinhibens ISM] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 29/270 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ +K G Y L+G K F+S SDA++++ + + Sbjct: 124 LTEPGSGSDAAALKTRAEKTDQG-YRLNGTKAFISGGGYSDAYVVMCRTGDDSPKGISTL 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 L+EDG+P GL + L++K+G RS T +++F D V G + E+ + Y Sbjct: 183 LVEDGTP-GLSFGALEDKMGWRSQPTAQVQFD--------DCTVPAGNLVGEEGRGFSYA 233 Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD +++S + A+ + Y R G + ++ +AD+ +++ AA Sbjct: 234 MQGLDGGRLNISACSLGAAQTAMNLTLQYMSERRAFGKSIDQFQALQFRLADLEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A D A A + K + + ++ + ++ GG GY+ + Sbjct: 294 RTFLRHAAWKLDTG------APDATKFCAMAKKFVTETGSHIVNQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLL 458 I + R+ + IL G+ M L V NLL Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIVARNLL 377 >gi|332284726|ref|YP_004416637.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] gi|330428679|gb|AEC20013.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] Length = 607 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 48/281 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQ------ 248 + LTE + G+D+A + ++ + DG Y LSG K F++ D ++LA+ Sbjct: 161 MNLTEPQAGSDLAQVATRAVRQDDGSYRLSGQKIFITYGEHDMAENIVHLVLARTPDAPK 220 Query: 249 -VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------T 294 V+G + F+VP+ L EDGS N + L++K+G + T L + + Sbjct: 221 GVKG-ISLFIVPKFLVNEDGSLGDRNDVWCASLEHKLGIHGSPTAVLLYGSGKGDVGEGA 279 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGIL-- 349 G+L+G+ N +E M I++ + + G+ +S +A YA R V G L Sbjct: 280 VGYLVGEENRG---LEYMFIMMNAARYAVGIQGVALSERAFQQATAYAHER-VQGQALEG 335 Query: 350 -------IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396 + P ++R + + A +L++ A + D+++ ++A A+ + Sbjct: 336 SAGPVAIANHPDVQRMLFTMKALTEGARSLAYVAAAACDKSRRHPDQAERAKNKALYEYL 395 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 P+ K + +++ V + ++ GG G+IEE A++YR++ Sbjct: 396 VPVVKGFSTELSIEVASLGVQVHGGMGFIEETGAAQYYRDA 436 >gi|228994060|ref|ZP_04153961.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|229007650|ref|ZP_04165243.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228753601|gb|EEM03046.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228765708|gb|EEM14361.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 379 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMRTTAKRDGD-HYILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDPESKQRGTSAFIVESDALGFSVGKKESKLGIRSSPTTEIMFEDCRIPAENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+ ++ YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A + AA L+++ A E +E+A +++ A T A V EA++ Sbjct: 286 ADMATSVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDT-------AMKVTTEAVQVF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|88705176|ref|ZP_01102887.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] gi|88700266|gb|EAQ97374.1| acyl-CoA dehydrogenase [Congregibacter litoralis KT71] Length = 557 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 148/341 (43%), Gaps = 48/341 (14%) Query: 151 LMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 LM P ++ + L +P + PK+ + + T + LTE G Sbjct: 125 LMYPGLSHGCIKTLEAHGSPEQKAQYLPKLVAGNWTGT-------------MCLTESHCG 171 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQV----EGRVGC--FL 257 +D+ + ++ + +DG Y ++G K F+S+ MSD I++A++ EG G F+ Sbjct: 172 SDLGLLRTKAEPQADGSYAITGTKIFISAGEHDMSDNIVHIVIARMPDAPEGTKGISLFV 231 Query: 258 VPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ + EDGS NG+ ++ K+G +++AT + F G+L+G+ N + Sbjct: 232 VPKFNVNEDGSLGERNGVHCASIEKKMGIKASATCVMNFDGAKGYLIGEPNRGLNMMFTF 291 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIA 360 + +AI ++ +S ++ YAR R ++G +I P ++R + Sbjct: 292 MNTARIGTAIQGLAHAELSYQGSLEYARERLAMRSLTGPKNPDGPADPIIVHPDVRRMLL 351 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEA 415 + A+ + LA D EEAA ++ PI K + + Sbjct: 352 TQKAIAEGSRAMLYYLAQLGDIVDRGDEEAAKKADDLMAVLTPIAKAFVTEAGLEAANHG 411 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+I E + + R++ ++ G+ LD++ Sbjct: 412 IQIYGGHGFIREWGMEQIARDARIATLYEGTTGIQALDLIG 452 >gi|325928316|ref|ZP_08189516.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] gi|325541327|gb|EGD12869.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] Length = 423 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D +A+ + K +DG + ++G K W S P++ ++ A E G + Sbjct: 166 LTEPQSGSDASAMRCRAVKQADGSFVINGKKSWITSGPVAKYIVLFAVTEPDKGSRGITA 225 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + D G + + K+G R++AT E+EF++ L V E K + LD Sbjct: 226 FMVDTDRAGFHRGKTEPKLGIRASATCEIEFADYVAQPDEVLGVEG---EGFKTAMSVLD 282 Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ V +A A + Y + R G + + + IAD+ + AA L+ Sbjct: 283 AGRIGIASQAVGIARAAYEATLAYVKERKAFGAAIGTFQMTQAKIADMKCKLDAALLLTL 342 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A + + EAA A++ A W + +A++ GG GY +E + R++ Sbjct: 343 RAAWLKGQGQKFGTEAAVAKLTASEAAMW-------ITHQAVQIHGGMGYSKEMPLERYF 395 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 396 RDAKITEIYEGT 407 >gi|319442756|ref|ZP_07991912.1| acyl-CoA dehydrogenase domain-containing protein [Corynebacterium variabile DSM 44702] Length = 393 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 29/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG------ 254 L+E G+D AA+ + ++ D Y L+G K W + +D + ++A+ G G Sbjct: 127 LSEAHAGSDPAALAMRARREGDS-YVLNGSKAWVTNGGFADFYTVMARTSGEPGDGKGIS 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFLVP G + K+G + T L F + + D + + +KI Sbjct: 186 CFLVP-----ADTPGFSAGPPERKMGLTGSPTAALTFDDVR--IPADQRIGE-EGQGLKI 237 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LDS + +S LA+ A+ YA+ R G +I+ + +AD+ + + Sbjct: 238 ALAALDSGRLGISACATGLAQGALDAAVDYAQERETFGQPIIEHQGLAFLLADMEAAVTS 297 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A A D + +EEA+ A++ +T K V +A++ +GG+GY + Sbjct: 298 SRATMLAAARLKDLGEPFAEEASMAKL---VTTDGAMK----VTTDAVQVLGGAGYTRDF 350 Query: 429 SIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 351 PVERYMREAKVMQIFEGT 368 >gi|149180899|ref|ZP_01859401.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1] gi|148851418|gb|EDL65566.1| acyl-CoA dehydrogenase [Bacillus sp. SG-1] Length = 379 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 49/313 (15%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 ++ P +TS T K W PK + E+ + +TE G+D Sbjct: 93 IVVPYITSYG------TEEQKKRWLPKCTTGEF-------------ITAIAMTEPGTGSD 133 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 +A I + + Y L+G K F+++ + SD ++ + + + V L+ + G Sbjct: 134 LANIKTTAV-LKGNHYILNGQKTFITNGIHSDLIVVACKTDPKAKHKGVSLLVVERDMTG 192 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDS------ 320 R NK+G S T EL F + LLG E+ K IYL Sbjct: 193 FSRGRKLNKVGLHSQDTAELIFEDCVVPKENLLG---------EEGKGFIYLMEKLQQER 243 Query: 321 ---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 AI + + V L + I Y + R G + + IA++A +I A +L Sbjct: 244 LLVAIAAQAASEVMLKQTIDYVKSRDAFGKPVSKFQNTQFKIAEMATEIEMTRAFLDQLI 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 E ++ + + A K+ A + AE M+ GG GY+EE IAR +R+ Sbjct: 304 AEHIEGENIVTKVSMA-------KWKMTDTAKKIAAECMQLHGGYGYMEEYEIARRFRDI 356 Query: 438 PANSILLGSGNAM 450 P SI G+ M Sbjct: 357 PVASIYAGTNEIM 369 >gi|48478468|ref|YP_024174.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus DSM 9790] gi|48431116|gb|AAT43981.1| acyl-CoA dehydrogenase, short-chain specific [Picrophilus torridus DSM 9790] Length = 377 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 18/255 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GL +TE G+D A+I + + S Y L+G K F+S+ ++ F++ A + Sbjct: 118 GLAITEPGAGSDAASIKTTAVR-SGNKYVLNGTKVFISNGRLARFFVVDASTDPERRAKG 176 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 + + D GL R +K+G R ++TVEL F N + + N+ E K+++ Sbjct: 177 ITSFVVDADAPGLKISRDIHKLGIRGSSTVELVFDNV---EVPEENIIGNVNEGFKVIMD 233 Query: 317 YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + S EA+ Y + R +ID ++ IAD+ I A+ Sbjct: 234 TLDAGRIGIAAQALGIAKASFEEALKYIKERKQFNQRIIDFEGVQFMIADMETRIKASEL 293 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + ++ E ++ I K + A V +++ GG GY + Sbjct: 294 LVYDAAEKWQNHENTIE-------ISSIAKMYASDTAMYVAERSLQLFGGYGYTTDFDAE 346 Query: 432 RHYRESPANSILLGS 446 RH R++ I G+ Sbjct: 347 RHLRDAKITQIYEGT 361 >gi|291443305|ref|ZP_06582695.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291346252|gb|EFE73156.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 390 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVG--CF 256 L+E G+D A++ ++ + D + ++G K W ++D +LA+ VEG G F Sbjct: 133 LSEPASGSDAASLRTKAVRDGDD-WVITGTKAWITHGGVADFCTVLARTGVEGARGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G GL + K+G + + T +L F G +GD + I L Sbjct: 192 LVP-----GDAEGLNAALPEKKMGMKGSPTAQLHFD---GVRVGDDRRIGEEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVRYATDRRQFGRPIADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + S +AA A K +C A V +A++ +GG GY + + Sbjct: 304 ALYLEAARLRDAGEPFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPV 356 Query: 431 ARHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 357 ERLMREAKVLQIVEGT 372 >gi|332141156|ref|YP_004426894.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551178|gb|AEA97896.1| Acyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] Length = 609 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 40/339 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ + + + DG Y L+G K F+S+ D I+LA++ EG Sbjct: 164 LTEAHCGSDLGMLKCRAEPQEDGSYSLTGTKIFISAGEHDMSENIVHIVLARLPDAPEGT 223 Query: 253 VGC--FLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + E+G N + +++K+G +++AT + F GFL+G N Sbjct: 224 KGISLFVVPKFNVSEEGEKQDRNAVACGSIEHKMGIKASATCVINFDGAKGFLIGPPNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + + + + ++ S A+ YA+ R ++G D P Sbjct: 284 LNCMFTFMNTARIGTGLEGLAASEASFQGALRYAKDRIQFRSMTGRKNPDGPADPIIVHP 343 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + ++A A+ +AA + D A + E A + PI K + + Sbjct: 344 DVRRMLLTQKAFAEGNRALAAYCMQMVDVTLYGDNAAEKQEAEAKLAFLTPIVKAFLTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 A + M+ GG G+I+E + + R++ ++ G+ +D+L G+N + Sbjct: 404 AQESTSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAVDLLGRKVMGSN--GE 461 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTE 506 L + Q++ + LRD+ L+ L E Sbjct: 462 LLNVFVQEV----RDYCNSLRDNAQFSAWTNALSSHLDE 496 >gi|323486311|ref|ZP_08091636.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum WAL-14163] gi|323693899|ref|ZP_08108087.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium symbiosum WAL-14673] gi|323400293|gb|EGA92666.1| hypothetical protein HMPREF9474_03387 [Clostridium symbiosum WAL-14163] gi|323502050|gb|EGB17924.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium symbiosum WAL-14673] Length = 379 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVG---- 254 GLTE G+D + +K D Y L+G K F + P+SD F + A +G Sbjct: 123 FGLTEPNAGSDAGGCVTIAEKKGD-KYILNGLKCFNTNGPLSDHFAVYALTHPELGSKGL 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 CF V + G+P G +++NK+G RS EL F N LLG+ + Sbjct: 182 SCFHVKK----GTP-GFSIGKIENKMGIRSAQVSELVFENCEIPETALLGEEK------Q 230 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIAL 364 KI + LD + V+ + +AE A AR+ R G L + +A++ Sbjct: 231 GFKIAMKTLDGGRIGVAAQGLGIAEGAFEIARKYLMTREQFGKPLYRNQYLAFKMAELEC 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A + ++ A E + S AA A+++ C A V EA++ +GG+G+ Sbjct: 291 EIEQAKYMLYKAALDKSEGRPYSIPAAKAKLV-------CTDAAMHVTTEAVQMLGGNGF 343 Query: 425 IEERSIARHYRESPANSILLGS 446 ++E + R R++ I G+ Sbjct: 344 MKEYHVERMMRDAKITQIYEGT 365 >gi|188989664|ref|YP_001901674.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|167731424|emb|CAP49599.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris] Length = 387 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + + D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRAEARGD-RFVLNGNKMWITNGPDADVLVVYAKTDPGAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|109098972|ref|XP_001091115.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform 2 [Macaca mulatta] Length = 412 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTARAEGDS-WVLNGTKAWITNAWEASAAVVFASTDRALQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLVP GL + ++K+G R ++T L F + +LG+ P Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE------PGM 259 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + ++ + +A+ A +YA R G L V++ +AD+AL Sbjct: 260 GFKIAMQTLDMGRIGIASQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMAL 319 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGY 372 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 373 VTEMPAERHYRDARITEIYEGT 394 >gi|326433236|gb|EGD78806.1| acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 634 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 42/293 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ K DG Y L+G K F+S D I+LA+ E Sbjct: 189 LTEPQCGTDLGQVKTKAVKQGDGSYKLTGTKIFISCGEHDFTENIVHIVLARTENSPAGT 248 Query: 253 --VGCFLVPRLLE--DGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + FLVP+ LE DGS N C +++K+G + T + F +T G+L+G Sbjct: 249 KGLSLFLVPKYLENSDGSLSKEKNVTC-GSIESKMGIHGSPTCVMHFEDTVGYLIGQ--- 304 Query: 305 STGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRH----VSGGIL---IDQPV 354 +E M + + + +A+ + ++ + YAR R +SG + P+ Sbjct: 305 EFKGLEQMFVFMNTARIGTALQGLGAAELAFQGGLTYARDRGSMRALSGTKAPEKVADPI 364 Query: 355 MKRAIADIALDIAAATALSFR--------LANSFDEAKSRSEEAAYARIMA---PITKYW 403 + L A A R +++ +A++ +E A M PI K Sbjct: 365 IHHGDVRRMLLTCKAVAEGARCMMYDVSMMSDYMLKARTEAERKAIDEEMGFLTPILKGC 424 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ ++C GG GYI+E + ++ R++ ++ G+ LD+L Sbjct: 425 ITELGLEAANLGVQCYGGHGYIKEWGMEQNVRDARIGTLYEGTTGIQALDLLG 477 >gi|330815686|ref|YP_004359391.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3] gi|327368079|gb|AEA59435.1| putative glutaryl-CoA dehydrogenase [Burkholderia gladioli BSR3] Length = 395 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K++ G Y LSG K W + Sbjct: 114 FGSEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YALSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 LL +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLLPEVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLVQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIVKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|320011675|gb|ADW06525.1| Butyryl-CoA dehydrogenase [Streptomyces flavogriseus ATCC 33331] Length = 383 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 47/303 (15%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + + W PK+ S E A+G GLTE G+D + ++ Sbjct: 95 AKTIASWGSEEQKRQWLPKLTSGE--------------AVGCFGLTEPGTGSDAGNLGTK 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y ++G K F+++ +D ++ A+ G V L GL + + Sbjct: 141 AVRDGDD-YVINGSKMFITNGTWADVVLLFARTGDTPGHRGVSAFLVPADAPGLTRRTIH 199 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPVEDMKILIYLDSAI----MSVSGM 328 K+G R AT EL +L D+ V GP + K SA+ MSV+ Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASTLVGP--EGKGFSVAMSALAKGRMSVAAG 249 Query: 329 RVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 V +A+A + YA R G + +++ I+DI++D+ AA L++R+A+ D Sbjct: 250 CVGIAQAALDAAVRYAGEREQFGRSIASYQLVQELISDISVDVDAARMLTWRVADLVDRG 309 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + A+ A++ A + A A++ GG GYI+E + + R++ ++ Sbjct: 310 QDFATAASTAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPVGKLVRDARVMTLY 362 Query: 444 LGS 446 G+ Sbjct: 363 EGT 365 >gi|108761574|ref|YP_633755.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108465454|gb|ABF90639.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 601 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 23/263 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258 LTE+ G+D ++ DG + L+G K +++ + +D F++ A+V+G + F+V Sbjct: 155 LTEQGSGSDALGAKTKAVLSPDGKHWILNGSKLYITNAAFADVFVVFAKVDGDKFTGFIV 214 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMKILIY 317 E +P GL ++K+G R ++T L F + + L V G IL Y Sbjct: 215 ----EKDTP-GLTVGPEEHKMGIRGSSTCPLYFEDARVPVENQLGEVGKGHKIAFNILNY 269 Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + GM++ L A+ + + R ++ P+ + +A +A + A ++++R Sbjct: 270 GRLKLGAGVLGGMKLQLQNALRFTQERKQFNAPIVQFPLSREKLARMAALVYAVESMTYR 329 Query: 376 LANSFDEAKSRSEEAA---YARIMAPITKYWCCKMAPAV---------IAEAMECIGGSG 423 A D + ++ A AR++ + +Y V + +A++ GG+G Sbjct: 330 TAGLVDARLGQGDKDAPDYEARLLEAVEEYAIESSIMKVHGSESFGHLVDDAVQLHGGAG 389 Query: 424 YIEERSIARHYRESPANSILLGS 446 YIEE + R YR++ N I G+ Sbjct: 390 YIEEYPVERSYRDARINRIFEGT 412 >gi|21243295|ref|NP_642877.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21108834|gb|AAM37413.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 597 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 58/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y+R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKSPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + + + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|297624541|ref|YP_003705975.1| acyl-CoA dehydrogenase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165721|gb|ADI15432.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM 17093] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 16/251 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D A+ ++ + D + W + +++ ++ A + + Sbjct: 125 LSEPDNGSDAGAMKTRARLEGDEVVLNGTKMWISNGGLAELTVVFATFDPEAKHRGTLAV 184 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320 + +G+P G+ YQ++ K+G R+ T EL F + + N+ P + +I + LD Sbjct: 185 VVEGTPPGMSYQKIHGKLGQRACVTAELVFEDV---RVPAANILGEPGDGFRIAMKTLDK 241 Query: 321 AIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + V+ V LA E+ Y+ RH G + ++ +AD+ + I A + Sbjct: 242 TRIPVAAGSVGLARRALDESRRYSAERHAFGRPINSFQALQFKMADMKIGIETARLQTLY 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D + +E +A I K + MA A EA++ GG GY+ E + + R Sbjct: 302 AAWLVDSGQPHTEASA-------IAKAYASDMAFAAANEAIQIHGGYGYVGEYPVEKLLR 354 Query: 436 ESPANSILLGS 446 + N I G+ Sbjct: 355 DVKLNQIYEGT 365 >gi|229488597|ref|ZP_04382463.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229324101|gb|EEN89856.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 385 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 21/262 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-------AQVEG 251 + +TE G+D+A I + + SDG Y L+G K F++ + I++ ++V Sbjct: 124 IAMTEPGAGSDLAGIKTTARLSSDGSHYVLNGSKTFITGGVQADLILVVARTSPPSEVNR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R G + L D + +G R K+G R+ T EL F++ LLG+ G Sbjct: 184 RAGLSI---LCVDTTSDGFGVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L +A+ S + ++ Y + R V G + K +A+ + ++AA Sbjct: 241 LTRNLVRERLGAAVGSYANASAAIEFTTEYVKEREVFGAPVAQFQNTKFVLAECSAEVAA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A R + DE + + A ARI K +C +MA VI + ++ GG GY+ E Sbjct: 301 AQAAVDRALD-LDEIRELTVADA-ARI-----KLFCTEMAGRVIDKCLQLHGGYGYMREY 353 Query: 429 SIARHYRESPANSILLGSGNAM 450 I+R Y ++ N I GS M Sbjct: 354 PISRLYADTRVNRIYAGSSEVM 375 >gi|284048916|ref|YP_003399255.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] gi|283953137|gb|ADB47940.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] Length = 377 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 46/278 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG---- 254 LTE G+D A+ ++ K D Y L+G+K F+++ ++D+F++ A G Sbjct: 121 FALTEPSAGSDAGAVATKAVKDGDH-YVLNGNKVFITNGGIADSFLVFANTRKTGGIRGL 179 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP+ +P G R ++K+G R + T EL +L D+ V E M+ Sbjct: 180 TAFIVPK----DTP-GFSVGRKEDKMGIRPSNTCEL--------ILEDVVVP----ESMR 222 Query: 314 I----------LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 + + LDSA V+ + V LA+ A HYAR R G + +++ Sbjct: 223 VGREGQGFRIAMNTLDSARPFVAAVAVGLAQSCLDIAAHYARERRQFGQPIASFQMVQAM 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IAD+A+ + A + + D+ +EAA ++K + +A V +A++ Sbjct: 283 IADMAMKVETARLMVHKACWMRDQGVEFGKEAA-------MSKCFASDVAMEVATDAVQI 335 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +GG GY+++ + + R++ I G+ + + N Sbjct: 336 MGGYGYMKDYPMEKKMRDAKILQIYEGTNQIQRMVIAN 373 >gi|262281354|ref|ZP_06059135.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262257180|gb|EEY75917.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AA+ ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAALKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----DTPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQAIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+++ I R YR++ I G+ + Sbjct: 334 QVFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|194290397|ref|YP_002006304.1| glutaryl-CoA dehydrogenase [Cupriavidus taiwanensis LMG 19424] gi|193224232|emb|CAQ70241.1| GLUTARYL-COA DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424] Length = 397 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKV-DGGYELTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLAGDDGKEDIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232 Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + + N+ G V+ +K L+SA ++ + AE A Y R G L Sbjct: 233 --VPEENIMPG-VKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLA 289 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +I RL DE + E + I K C + Sbjct: 290 QTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLD 342 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E + RH Sbjct: 343 IARVARDMLGGNGISDEFGVIRH 365 >gi|86158089|ref|YP_464874.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774600|gb|ABC81437.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] Length = 387 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 22/257 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGCF 256 L+E + G+D AA+ ++ + D +W S ++ ++ A+ + G Sbjct: 123 FALSEPQAGSDAAAMRTRAVRRGDRWVIDGAKQWITSGDVAGVLVVWARTGPADAGGGGG 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 + L+E G+P GL R ++K+G R+++TV L F S G + L V+ + Sbjct: 183 VTAFLVEAGTP-GLHVGRHEDKLGIRASSTVALSFDGCEVPDSARLGEVGQGLRVAFAAL 241 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I A + +R +L ++ YAR R G + + + +AD+A++ A Sbjct: 242 DGGRVGI----ASQATGTIRAALEASVRYARDRQAFGVPIAEHQAVAFMLADMAVEHDTA 297 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+ R A + + + EA+ A K W + A + A++ GG GY E+ Sbjct: 298 RLLALRAAALKEAGRPFTREASMA-------KLWASEAAQRAVGRAVQIHGGVGYTEDFP 350 Query: 430 IARHYRESPANSILLGS 446 +AR++R++ +I G+ Sbjct: 351 VARYFRDARVQTIYEGT 367 >gi|262381115|ref|ZP_06074253.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B] gi|262296292|gb|EEY84222.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_33B] Length = 569 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 131/291 (45%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKREGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIDFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 L ++ A D K+ R E+ YA++ P+ K + A Sbjct: 347 TLLYQTARYVDIYKALDDIARERKLTLEERKEQKQYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457 >gi|238026355|ref|YP_002910586.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1] gi|237875549|gb|ACR27882.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1] Length = 395 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 19/262 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++++ + + G Y LSG K W + Sbjct: 114 FGSEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGGMSTRAKPVPGG-YVLSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D FI+ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFIVWAKLEENGEDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVF- 230 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351 + + N G LDSA +S + AE+ + R++V G L Sbjct: 231 --VPEENRLPGVKGLRGPFTCLDSARYGISWGALGAAESCWHTARQYVLDRKQFGRPLAA 288 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C A V Sbjct: 289 NQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALEV 341 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E +ARH Sbjct: 342 ARLARDMLGGNGISDEFGVARH 363 >gi|71278527|ref|YP_271124.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] gi|71144267|gb|AAZ24740.1| acyl-CoA dehydrogenase family protein [Colwellia psychrerythraea 34H] Length = 602 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 74/345 (21%), Positives = 140/345 (40%), Gaps = 58/345 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G+K F++ D ++LA++ Sbjct: 166 LTESHSGSDLGIIRTKAIPQDDGSYSITGNKIFITGGEHDLTENIVHLVLAKLPDAPAGP 225 Query: 253 --VGCFLVPRL-LED----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ + D G N + +++K+G ++AT + F ++ GFL+G+LN Sbjct: 226 RGISLFLVPKFNVNDDETLGEYNNVSCGSIEHKMGIHASATCVMNFDDSKGFLIGELNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--------HVSGGILIDQPV--- 354 + M + I +S S A+ YA+ R +G DQ Sbjct: 286 LACMFTMMNFERIGVGIQGLSAAVRSYQNALEYAKDRLQGRALDSKTNGVKNPDQEADSI 345 Query: 355 -----MKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWC 404 ++R + ++ + ALS ++ D E + + + A +M PI K + Sbjct: 346 MVHGDVRRMLLNMKALNEGSRALSSYISMQLDYATYAEGEEQVKGETLAALMTPIAKAFF 405 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + + GG GYI E + R++ I G+ +D+L Sbjct: 406 TDLGFENTVAGQQVFGGHGYIREWGQEQLVRDARITQIYEGTNGIQAMDLL--------- 456 Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISL----CKEDKGLARFLT 505 + + GS G ++ + D ++ C D+ ++ F+T Sbjct: 457 -------MRKVAGSKG-AMLKVFTDEVNTFIESCSHDQAMSEFIT 493 >gi|312960844|ref|ZP_07775349.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] gi|311284502|gb|EFQ63078.1| acyl-CoA dehydrogenase family protein [Pseudomonas fluorescens WH6] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLDGDH-YVLNGCKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 G+ G F+VP SP G R+++K+G ++ T ++ F +N G Sbjct: 170 TDPTAGKRGISAFIVP----TDSP-GYSVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E ++ I A +V R + A YAR R G LI+ + Sbjct: 225 EEGEGYRIALANLEGGRVGI----ASQAVGMARAAFEAARDYARERESFGKALIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D K A + A + K + +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGKP-------ALVEASMAKLFASEMAEKVCSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|293609434|ref|ZP_06691736.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827886|gb|EFF86249.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 378 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP + G R+++K+G ++ T + F + L +L G E KI Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATINFEDCR-IPLENLVGQEG--EGYKIA 233 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + A SV R + A+ YA R G L+ + +AD+A I AA Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDFP 346 Query: 430 IARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 347 VERIYRDVRVSQIYEGASD 365 >gi|319645561|ref|ZP_07999793.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2] gi|317392447|gb|EFV73242.1| hypothetical protein HMPREF1012_00826 [Bacillus sp. BT1B_CT2] Length = 571 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 27/297 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + A T+ + L+G K W ++ ++D +++ A+ + F+V Sbjct: 148 LTEPGAGSDALNAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKTAEGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 R S G+ + K+G + ++T VE+ N G + +V+ + Sbjct: 208 R-----SFKGVSIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILN-- 260 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A ++ + +L A+ YA++R +I +++ IAD+A+ I A + Sbjct: 261 --MARLKLAFSNIGTAKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESA 318 Query: 373 SFRLANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++R A+ D R + I K +C ++ + EA++ GG GY+ Sbjct: 319 AYRTADCLDNVLDSALPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYM 378 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 +E + R YR++ + I G+ L + LL K + + S E LGS G + Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNR 433 >gi|329894555|ref|ZP_08270363.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] gi|328922993|gb|EGG30319.1| acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 47/314 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + DG + L G K F+S+ D I++A++EG Sbjct: 165 LTEPHCGTDLGLLRTKAVRNDDGSFSLHGTKIFISAGEHDMAENIVHIVIARIEGAPEGT 224 Query: 253 --VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + EDG+ N L +++K+G +++AT + F G+L+G N Sbjct: 225 KGISLFVVPKVNVNEDGTLGGRNALNCASIESKMGIKASATCVMNFDGAKGYLIGPENRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353 + L +A+ + ++ A YAR R ++G D P Sbjct: 285 LNCMFTFMNAARLGTAVQGLCHAELAYQGAFSYARERLAMRSLTGPKNPDGPADPILVHP 344 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-----YARIMAPITKY 402 + +RAIA+ + A F LA D ++ +EE A ++ PI K Sbjct: 345 DVRRMLLTQRAIAE------GSRAFLFFLALQGDIIRAGNEEQAKQADNLMALLTPIAKA 398 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEK 460 + ++ ++ +GG GYI E + + R++ + G+ +D++ +L Sbjct: 399 FVTELGFEAANHGVQVLGGHGYIREWGMEQIVRDARIALLYEGTTGVQAMDLIGRKVLGS 458 Query: 461 GTNLFEQLFSTLEQ 474 G L + +++ Sbjct: 459 GGKLLMDFTAIMDE 472 >gi|21230718|ref|NP_636635.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769286|ref|YP_244048.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|188992437|ref|YP_001904447.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|21112310|gb|AAM40559.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574618|gb|AAY50028.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|167734197|emb|CAP52405.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris] Length = 393 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 16/255 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKTRAQRDGDD-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y R + K+G S T + F++ G LLG G MK L Sbjct: 191 FVVAADAPGISYGRKEEKMGWNSQPTRGITFTDVRIPAGNLLG--KEGEGFKMAMKALDG 248 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A S+ + +L A Y R G L D ++ +AD+A + AA + Sbjct: 249 GRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVHT 308 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D A + + K + A+ EA++ GG GYI E I R R Sbjct: 309 AARKLDAGSHD------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIREYPIERLLR 362 Query: 436 ESPANSILLGSGNAM 450 +S + IL G+ M Sbjct: 363 DSRVHRILEGTNEVM 377 >gi|330886281|gb|EGH20182.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 66/353 (18%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ------PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 G L D PV ++R + + A L + FD+ ++ E A Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDAR 384 Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 LD+L L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|325915813|ref|ZP_08178112.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325537934|gb|EGD09631.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 393 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 32/274 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256 LTE G+D A++ ++ Q+ D Y L+G K F+S + +D +++A+ +G G F Sbjct: 133 LTEPGAGSDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 VP G+ Y R + K+G S T + F++ G LLG E K Sbjct: 192 AVP-----ADAPGISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLGKEG------EGFK 240 Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIA 367 + + LD ++++ + A+ A RR++ G L D ++ +AD+A + Sbjct: 241 MAMKALDGGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLV 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + A D A + + K + A+ EA++ GG GYI E Sbjct: 301 AARQMVHTAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDEALQIHGGYGYIRE 354 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 I R R+S + IL G+ M + V L G Sbjct: 355 YPIERLLRDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|254820427|ref|ZP_05225428.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 611 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 83/376 (22%), Positives = 159/376 (42%), Gaps = 61/376 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPI 399 + P ++R++ AL + D + + + A +M P+ Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLFTSTYQDASVAEALHGVDAELAVKVNDLMLPV 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + A A + E+++ GGSG++++ I ++ R++ +S+ G+ D Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462 Query: 457 LLEKGTNLF---EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513 + +KG L EQ+ ++ + G+ L E + LA+ LT+ A+A+S Sbjct: 463 VRDKGVALAHVSEQIQKFVDSESGNG------------RLKTEREYLAKALTDVQAMATS 510 Query: 514 AAALYRAGMNDIADVF 529 A D+ ++ Sbjct: 511 LTGYLMAAQEDVTSLY 526 >gi|167644418|ref|YP_001682081.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167346848|gb|ABZ69583.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 17/266 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I+++ + + G + ++G K F+++ +D +++ + + G + Sbjct: 125 VAMTEPGAGSDLQRISTRAEPVEGG-FRVTGQKTFITNGQNADLIVIVCKTDPAAGGKGI 183 Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 L LE G R KIG + T EL F +TF +LG L G V+ M+ Sbjct: 184 SLLVLETEGAEGFTRGRNLKKIGMHAQDTSELFFQDTFIPKSHVLGVLG--GGFVQLMQQ 241 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + + A+ +V+ M +L I Y + R G +ID + +A+ AA+ A Sbjct: 242 LAWERMVIALDAVACMERALEVTIDYVKSRTAFGKQVIDYQNTQFKLAE--CKTAASVAR 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 F DE R + A + K W + VI + ++ GG GY+EE IAR Sbjct: 300 IF-----VDELMVRLIAGELSPETAAMAKLWTTETQAKVIDDCLQLHGGYGYMEEYPIAR 354 Query: 433 HYRESPANSILLGSGNAMVLDVLNLL 458 Y ++ A I G+ M + + L Sbjct: 355 LYADARATRIYGGTNEIMKMIIARTL 380 >gi|219664379|gb|ACL31229.1| acyl-CoA dehydrogenase [Rhodococcus sp. TFB] Length = 383 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 34/280 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVG 254 GLTE G+D + ++ + D + L+G+K F+++ +D ++ A+ G V Sbjct: 123 FGLTEPDTGSDAGNLKTRATRDGDD-WILNGNKIFITNGTWADVCLVFARTGGPGPKGVS 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLVP G + K+G R AT EL F LLG + Sbjct: 182 AFLVPT-----DTPGFGRTEIHGKLGLRGQATAELSFDGVRVPASALLGAEG------DG 230 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 KI ++ LD +SV+ V + + + Y+ +R G +L +++ IADI++D Sbjct: 231 FKIAMHSLDKGRVSVAAGCVGIIQGCLEAVVDYSTQRQQFGRLLASFQMIQDMIADISVD 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA L++R AN + + A+ A KY+ + A A++ GG GY+ Sbjct: 291 ADAARLLTWRAANLIERGEPFGTAASKA-------KYFASEAAVRAANLAIQAFGGYGYV 343 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 +E + ++ R++ ++ G+ L ++ E G + F Sbjct: 344 DEYPVQKYMRDARVMTLYEGTSQIQKL-LIGRAETGVSAF 382 >gi|104782574|ref|YP_609072.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48] gi|95111561|emb|CAK16281.1| acyl-CoA dehydrogenase protein FadFx [Pseudomonas entomophila L48] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 30/273 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ Sbjct: 110 APLASGAMLGAFALTEPQAGSDASSLKTRARLDGDH-YVLNGSKQFITSGQNAGVVIVFA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V G+ G F+VP G R+++K+G ++ T ++ F N L Sbjct: 169 VTDPDAGKRGITAFIVPT-----DAPGYQVARVEDKLGQHASDTCQIVFDNVRVPVANRL 223 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G+ ++ +E +I I A SV R + A YA R G LI+ + Sbjct: 224 GEEGQGYKIALANLEGGRIGI----ASQSVGMARAAFEVARDYANERQSFGKPLIEHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A IA A + A D + A + A + K + +MA V ++A Sbjct: 280 AFRLADMATRIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG GY+ + + R YR+ I G+ + Sbjct: 333 LQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|299536960|ref|ZP_07050265.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] gi|298727540|gb|EFI68110.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] Length = 397 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 31/269 (11%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ 248 Q V IG GLTE G+D+AA+T+ + DG Y L+G K W ++D FI+ A Sbjct: 114 QAKGVRIGAFGLTEPGAGSDVAAMTTTA--VRDGNHYILNGQKTWISLCDIADHFIVFAY 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + F+V R S G + +K K G R+ T EL F + L N Sbjct: 172 TDKSKKHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFED---LRLPIEN 223 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 E KI + LD+ +V+ V L +A + Y R G + + ++ R Sbjct: 224 RLGEEGEGFKIAMSALDNGRFTVAAGAVGLIQACIEASVKYCHERETFGKPIGEHQLVGR 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA++ + L +R+ ++ + E + A K+ C A +A++ Sbjct: 284 MIANMEAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQSCDFANKAADDAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY +E +AR+ R S A I G+ Sbjct: 337 IHGAYGYSDEYPVARYLRNSKAPVIYEGT 365 >gi|21717402|dbj|BAC02933.1| acyl-CoA dehydrogenase B [Acinetobacter sp. M-1] Length = 599 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ I S+ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 165 LTESHAGSDLGIIRSKAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGT 224 Query: 253 --VGCFLVPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP +++ S + ++K+G NAT + F G+L+G N Sbjct: 225 KGISLFIVPNSTSMLMVQLASVMQYVVVQFEHKMGIHGNATCVINFDQAKGYLIGPENRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ +S S A+ YA+ R +SG +I P Sbjct: 285 LNCMFTFMNTARIGTAVQGLSASESSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + LA D E EE +A ++ PI K + + Sbjct: 345 AVRNMLLTQKSFAEGGRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTET 404 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 405 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 452 >gi|55978205|ref|YP_145261.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8] gi|55773378|dbj|BAD71818.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB8] Length = 378 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 39/268 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255 LTE G+D A++ ++ + D Y L G K F+S + +++ F++ A+ + G C Sbjct: 120 LTEPEAGSDAASLKTRAHREGD-FYVLEGQKTFISHANVAEVFLVFAKTDPEKGAKGITC 178 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310 FLV R +G+ LK K+G R+ ++T L + V V E Sbjct: 179 FLVER------GDGVKTSPLKGKLGLRA--------ADTGMVFLDGVRVPKDRVLGKEGE 224 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +I L LD+ +S++ V L + ++ Y R R G + +++ +A + L Sbjct: 225 GFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYTRERKQFGKPIAQFQLVQEHLAAMKL 284 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D+ AA L++R A + + + EA+ A++ A + A V A++ GG G+ Sbjct: 285 DLEAARLLTYRAAWKKVKGEPYTLEASLAKLFA-------SEAANRVAYRAIQVHGGYGF 337 Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452 EE +AR YR++ ++ G+ L Sbjct: 338 FEEYEVARLYRDARILTLYEGTSEVQKL 365 >gi|326382721|ref|ZP_08204411.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326198311|gb|EGD55495.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 28/283 (9%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ S E V + +TE G+D+ + ++ K D Y + G K Sbjct: 112 WLPKMASGE-------------VVGAIAMTEPGTGSDLQNVKTKAIKDGDD-YVIDGSKT 157 Query: 234 FLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+++ +D I++A+ + G + ++ + G R+ +K+G R T EL F+ Sbjct: 158 FITNGGQADVVIVVAKTDSTEGAKGISLIIVETEREGFSRGRILDKVGMRGQDTAELNFT 217 Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 LLGD G ++ M L L + SV+GM V+L + + Y + R G Sbjct: 218 GVRVPQANLLGDQE-GLGFIQLMTQLPQERLIIGVASVAGMEVALEKTLEYTKERTAFGR 276 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + K +A++A + A D+ + ++K+W + Sbjct: 277 PIYGFQNTKFKLAEVATEAHIARVF-------IDDCIEQHLRGELDIPTVAMSKWWTTEK 329 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A V ++ GG GY+ E IAR + ++ I G+ M Sbjct: 330 AMEVADTCLQLFGGYGYMNEYPIARMWADNRVQMIYGGTNEIM 372 >gi|323486322|ref|ZP_08091647.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum WAL-14163] gi|323693887|ref|ZP_08108075.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673] gi|323400304|gb|EGA92677.1| hypothetical protein HMPREF9474_03398 [Clostridium symbiosum WAL-14163] gi|323502038|gb|EGB17912.1| butyryl-CoA dehydrogenase [Clostridium symbiosum WAL-14673] Length = 384 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 31/273 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD A Q + + DG + L+G K F+++ +D ++++A Sbjct: 113 PLAKGEKLGAFGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKIFITNGKEADVYVIIA 170 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 GR + ++E G+P G + + K+G R +AT EL F++ L Sbjct: 171 VTGIKEDARGRKKKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFTDCRIPKENL 229 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353 LG G + LD + ++ + LAE + Y + R G + Sbjct: 230 LGQQGKGFGIA-----MHTLDGGRIGIAAQALGLAEGALERTVEYVQERKQFGRTIGQFQ 284 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+A + AA L +R A + K S EAA A++ + ++A V Sbjct: 285 NTQFQLADMATKVKAAQLLVYRAAMAKKTQKVYSVEAAMAKL-------YAAEVAMEVTT 337 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY E + R R++ I G+ Sbjct: 338 KAVQLHGGYGYTREYDVERMMRDAKITEIYEGT 370 >gi|291539138|emb|CBL12249.1| Acyl-CoA dehydrogenases [Roseburia intestinalis XB6B4] Length = 384 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 27/261 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251 LTE GTD A +Q + + DG + L+G K F+++ ++D +I++A G Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R +++ G+P G + + K+G R ++T EL F + + N+ + Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236 Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 I ++ LD + ++ + +AE AI Y + R G + Q + +AD+A Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMATR 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L ++ A + K S EAA A++ A T A AV E ++ GG GYI Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYGYI 349 Query: 426 EERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 350 REYDVERMMRDAKITEIYEGT 370 >gi|166714162|ref|ZP_02245369.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 387 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 43/311 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADA-RGAR 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G K W + P +D ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIIEKGMPGFSTAQKL-DKLGMRG 211 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL FS N G L G + V ++ ++++ + + M V+L Sbjct: 212 SNTCELVFSDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVALP--- 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + + +M+ +AD+ + + A A + +A + D ++ ++AA A + Sbjct: 269 -YVHERKQFGEPIGNFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 327 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A W + +A++ +GG+GYI + R +R++ I G+G + + +L Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377 Query: 457 LLEKGTNLFEQ 467 G LFE+ Sbjct: 378 ---IGRELFER 385 >gi|324999836|ref|ZP_08120948.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length = 402 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 25/279 (8%) Query: 184 DPTNKAPMQKTSVAIG----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238 DP +A + + S G + L+E G+D+AA+ ++ + D Y ++G K W ++ Sbjct: 114 DPDRRAELLRRSARGGWIGAIALSEPDAGSDLAAVETRAVRDGD-EYVVTGRKRWTGNAK 172 Query: 239 MSDAFIMLAQV------EGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +D +L + E R +V D P+GL + +KIG T +LE Sbjct: 173 AADFVQVLVRTADPEPGEKRSAGLATVVVEKQRDTFPDGLTGTPI-DKIGYHGFVTWDLE 231 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYL---DSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 F + L D + + + +A +V R ++ + + Y +RR Sbjct: 232 FDGLRVPVANQLGAGGEGFADAQAWLNIARVHTAARAVGLARAAVEDCVRYLQRRRQFEH 291 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + D ++ +A +A + A + +A+ D+ +S EAA A+++A +M Sbjct: 292 PIGDFQAVRFTLATMAARVEQARSFYQHVAHRLDQGESCEREAAMAKLVA-------TEM 344 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V A+ ++ GG+GY E + RH+R++ +I G+ Sbjct: 345 AAEVTADGIQLHGGNGYTTEHQVERHWRDARLTTIFEGT 383 >gi|222053281|ref|YP_002535643.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] gi|221562570|gb|ACM18542.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. FRC-32] Length = 583 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 23/263 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D + + +DG Y L+G K F++ S +D F + A+++G FLV Sbjct: 147 LTEPDCGSDPLSSRTTATLSADGRHYILNGTKQFITNSAFADLFTVFAKIDGLHFSAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + E G + K+G R ++T +L N LLG+ ++ + Sbjct: 207 EKSFE-----GFSVGAEEKKMGLRGSSTTQLVLDNVKVPVENLLGEPGKGHKIAFNVLNV 261 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A ++ + + EA YA R G + + ++ +AD+ I A+ + +R Sbjct: 262 GRLKVATQALGMSKGAFGEAASYATERKQFGRTIGEFGAIREKLADMTAAIFASETVIYR 321 Query: 376 LANSFDEAKS---RSEEAAYARIMAPITKY---------WCCKMAPAVIAEAMECIGGSG 423 +A D + S Y R I +Y +C + V+ EA++ GG G Sbjct: 322 VAGLLDSRLALLDHSGSDYYERYQKAIEEYAAECAIAKVFCTEQLDMVVDEAVQIHGGYG 381 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI E + R+YR+S I G+ Sbjct: 382 YIAEYPVERYYRDSRIQRIFEGT 404 >gi|26991626|ref|NP_747051.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24986719|gb|AAN70515.1|AE016693_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 46/297 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQ------ 248 + LTE G+ +A I ++ + DG Y L G+K F+S +S+ + +LA+ Sbjct: 162 MALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPP 221 Query: 249 -VEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ + G N + L +K+G R + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKYHVNPNGSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLV 280 Query: 300 GDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HV 344 G + + M +I + + + ++ +G SL YAR+R H Sbjct: 281 GQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQGRLPDNKDPHS 336 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA------RIMAP 398 +I+ +KR + + A L A FD+ + +E A ++ P Sbjct: 337 PAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAPDENARKPAQDLLDLLTP 396 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 I K W A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 397 IVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 453 >gi|299771467|ref|YP_003733493.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298701555|gb|ADI92120.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 403 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLSGAKMWITN 177 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIAAVEGTS-------LIKRNNC 342 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370 >gi|296162108|ref|ZP_06844905.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295887614|gb|EFG67435.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 379 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 48/334 (14%) Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKDW-APKI--FSREYDPTNKAPMQKTS 195 Y + GH +++ V A + L VH D AP I E P T Sbjct: 62 YGGGGGDFGHAAILNEEVNRAGLSGLGFG--VHSDIIAPYIARIGNEEQKQKWLPKTCTG 119 Query: 196 VAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253 AI +G+TE G+D+ AI + + D Y ++G K F+S+ + +D I++ + + Sbjct: 120 EAILAIGMTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSA 178 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLL 299 G V ++ + + G R +K+G S T EL F N F +L+ Sbjct: 179 GSRGVSLIVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLM 238 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G+L P E + I AI + + + L I+Y + R + D K + Sbjct: 239 GEL-----PQERLSI------AIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKL 287 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAM 416 ADI A ATA+ + + E R EEAA A++ A + + + + Sbjct: 288 ADIK---AQATAVRVLVDHYLAEHVRRRLTLEEAAIAKLFA-------TESLGKALDDMV 337 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E +AR + ++ N I G+ M Sbjct: 338 QLHGGYGYMLEYPVARAFADARVNRIYGGTSEVM 371 >gi|254719954|ref|ZP_05181765.1| acyl-CoA dehydrogenase [Brucella sp. 83/13] gi|265984964|ref|ZP_06097699.1| acyl-CoA dehydrogenase [Brucella sp. 83/13] gi|306838543|ref|ZP_07471381.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653] gi|264663556|gb|EEZ33817.1| acyl-CoA dehydrogenase [Brucella sp. 83/13] gi|306406410|gb|EFM62651.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653] Length = 384 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTATDVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|195055316|ref|XP_001994565.1| GH15455 [Drosophila grimshawi] gi|193892328|gb|EDV91194.1| GH15455 [Drosophila grimshawi] Length = 336 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 17/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D +A ++ + G Y L+G K W +S + ++ A ++ + + Sbjct: 77 LSEPGSGSDASAASTTAKLNGSGDYLLNGTKAWISNSKEASGGLVFATIDKSLKHKGITA 136 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 LL GL + +NK+G R+++T +L ++ + V G +I + LD Sbjct: 137 LLTAKDVPGLTIAKRENKLGMRASSTCQLVLND---VAIPQSQVLGGAGHGFRIAMESLD 193 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ +A+A + YA +R G L ++++ +AD+AL + A L++ Sbjct: 194 CGRIGIAAQATGIAQAALELAVDYADKRVAFGQRLSRLQLIQQKLADMALRVETARLLTW 253 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D S ++EAA A++ A T +C + ++ +GG GY + +Y Sbjct: 254 RAAWLKDNGLSITKEAAMAKLHASETATFCAH-------QCIQILGGMGYTTDLPAELYY 306 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R + I G+ + + N + KG Sbjct: 307 RNARVTEIYEGTSEIQRIVIANCIMKG 333 >gi|289624132|ref|ZP_06457086.1| butyryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330865822|gb|EGH00531.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 568 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 151/353 (42%), Gaps = 66/353 (18%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHM 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ--------PVMKRA-IADIALDIAAATALSFRL----ANSFDEAKSRSEEAAY 392 G L D P+++ A + + L A +F L + FD+ ++ E A Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDAR 384 Query: 393 AR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 LD+L L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 445 HGIQSLDLLG-------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|311742614|ref|ZP_07716423.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311314242|gb|EFQ84150.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 381 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 120/291 (41%), Gaps = 30/291 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK+ S E V + +TE G+D+ I ++ + D Y Sbjct: 106 TEEQKQHWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAAREGDE-Y 151 Query: 227 CLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 +SG K F+++ +D + + + + + +L S G R+ +KIG + Sbjct: 152 VVSGSKTFITNGSQADLVLTVVKTDPDDRAAGISLMLVPTSAEGFSRGRVLDKIGMKGQD 211 Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340 T EL F N LLG L G V+ M+ L L A+ +V+ M LAE + Y R Sbjct: 212 TSELFFDNVRVPVTNLLG-LTEGQGFVQLMQQLPQERLLVAVSNVAAMEFCLAETLAYVR 270 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPI 399 R G + K +A++A + R+A SF DE A + Sbjct: 271 DRTAFGRPIWGFQNTKFKMAEVATEA--------RVARSFVDECIQLHVGEGLDIPTAAM 322 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K WC + A V ++ GG GY+ E IAR + + + I GS M Sbjct: 323 VKLWCSERAQRVADTCLQLHGGYGYMNEYPIARVWADMRVSQIYAGSSEIM 373 >gi|193713629|ref|XP_001947919.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Acyrthosiphon pisum] Length = 411 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ K S + L+G K W ++ + A ++ A + + Sbjct: 151 FGLSEPGNGSDAGAASTMAVK-SGSSWILNGTKSWITNAHEAKASVVFATTDKTKKHKGI 209 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLV R G + ++K+G R ++T L F + + + N+ P K Sbjct: 210 SAFLVRREYP-----GFSLGKKEDKLGIRGSSTSNLIFEDCS---IPEENILGEPGMGFK 261 Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I ++ LD+ + ++ + +A+A + YA +R G + ++ IAD++L + Sbjct: 262 IAMMTLDAGRIGIASQALGIAQASLDVAVEYATKRIAFGAPISKLQSIQNKIADMSLRVE 321 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGY 424 +A L++R A DE K ++EAA A++ A + A A +CI GG GY Sbjct: 322 SARLLTWRAAVLKDEHKPYTKEAAMAKLAA----------SEAATFNAHQCIQVLGGMGY 371 Query: 425 IEERSIARHYRESPANSILLGS 446 + + RHYR++ I G+ Sbjct: 372 VSDMPAERHYRDARITEIYEGT 393 >gi|126273321|ref|XP_001376267.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, short/branched chain [Monodelphis domestica] Length = 389 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 28/269 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ +K D Y ++G K W ++ + F+++A V +G C Sbjct: 133 LSEAEAGSDAFALKTKAEKKGD-YYIINGSKMWISNAEHAGIFLVMANVNPGLGYKGITC 191 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F++ R E GL + +NK+G R+++T + F N + + N+ K Sbjct: 192 FIIDRDTE-----GLQVGKKENKLGIRASSTNTVIFENV---KVPETNILGQVGHGYKYA 243 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + ++ A +A + AA Sbjct: 244 IGMLNEGRIGIAAQMLGLAQGCFDHTIPYLKERMQFGKTIYSFQGIQHQTAQVATQLEAA 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + K +EA+ A KY+ ++A ++ +E +GG GY + Sbjct: 304 RLLTYNAARLVENGKPFVKEASMA-------KYFSAEVAGLTTSKCIEWMGGVGYTKNYP 356 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + +++R++ +I G+ N + + LL Sbjct: 357 MEKYFRDAKIGTIYEGTSNIQLSTIAKLL 385 >gi|227498681|ref|ZP_03928825.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904137|gb|EEH90055.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 635 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE G+D ++ + DG + L+G+K F+++ +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGSDAGG--TETTAVFDGKNWILNGNKIFITNGGEADTYVVFA 170 Query: 248 QVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + G + +LE G P G + +K+G RS+AT EL F+N LLG L Sbjct: 171 VTDPDAGTRGISAFILEKGMP-GFTFGDHYDKLGIRSSATAELIFNNVKVPQENLLGRLG 229 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 + KI + LD + ++ + +A+ A++Y++ R G + + Sbjct: 230 ------QGFKIAMATLDGGRIGIAAQALGIAQGAYEAALNYSKERIQFGAPICQNQGVSF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A + AA L + A + ++E Y + + + K + +A + +A++ Sbjct: 284 KLADMATRLRAARFLVYSAA------EMKTEHMDYG-MQSAMAKLYASDLAVEITNDALQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG+GY++ I R YR++ +I G+ Sbjct: 337 IFGGTGYLKGMDIERMYRDAKITTIYEGT 365 >gi|148550023|ref|YP_001270125.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148514081|gb|ABQ80941.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 600 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 46/307 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + LTE G+ +A I ++ + DG Y L G+K F+S +S+ + Sbjct: 152 PMIEGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSYRLKGNKIFISGGDHELSENIVHM 211 Query: 245 MLAQ-------VEGRVGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ + DGS N + L +K+G R + L F Sbjct: 212 VLAKLPDAPPGVKG-ISLFIVPKYHVNPDGSRGPRNDVLLAGLFHKMGWRGTTSTALNFG 270 Query: 293 NT---FGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 + G+L+G + + M +I + + + ++ +G SL YAR+R Sbjct: 271 DNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQG 326 Query: 343 --------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA- 393 H +I+ +KR + + A L A FD+ + ++E Sbjct: 327 RLPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAADENTRKL 386 Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W A++ +GG GY E + ++YR++ N I G+ Sbjct: 387 AQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEG 446 Query: 449 AMVLDVL 455 LD+L Sbjct: 447 IQSLDLL 453 >gi|313901888|ref|ZP_07835307.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965] gi|313467829|gb|EFR63324.1| Butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965] Length = 604 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 51/309 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D ++ DG Y L+G K W +S +D F++ A+V+G ++ F+V Sbjct: 159 LTEPDAGSDALGGKTRAVLSPDGKHYILNGQKQWITNSGFADVFVVYAKVDGDKMTAFIV 218 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-- 316 R S G+ K+G ++ S+T L D+ V PVE++ + Sbjct: 219 ER-----SFPGVSVSEEVRKMG--------IKGSSTRTLYLNDVPV---PVENVLHEVGK 262 Query: 317 --YLDSAIMSVSGMRVS----------LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 ++ I+++ +++ +A A YA+ R G + P++++ +A +A Sbjct: 263 GHHIAFNILNIGRWKLAAGNLGACKELIALATQYAQGRKQFGQPIASFPLIQQKLAAMAA 322 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPAV 411 A A+ +R A +FD + S ++ A YA + A I K + + V Sbjct: 323 RTYALEAMVYRTAGAFDASLSEIDQDAPDAGRQAITAISEYA-VEASINKVFGSETLDFV 381 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVL--DVLNLLEKGTNLFEQ 467 + EA++ GG GY++E + R YR++ N I G+ N +++ +++ KG Q Sbjct: 382 VDEAVQIHGGYGYMQEYEVERAYRDARINRIFEGTNEINRLLIPRELMRRTMKGQLPLMQ 441 Query: 468 LFSTLEQDL 476 S +++DL Sbjct: 442 ALSRVQKDL 450 >gi|294828426|ref|NP_714108.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|293386280|gb|AAN51126.2| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 586 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 72/369 (19%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W P+I + +Y + + LTE G+D+ + ++ + ++GI+ ++G Sbjct: 170 EKWIPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDANGIWRINGA 216 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLK----------N 277 K F++ +I V + L GSP GL + +K + Sbjct: 217 KRFITHAC--GYINAPSV--------ILTLARTGSPESGARGLSFFLVKGSDVHIAGVEH 266 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G + T E+ F N+ G L+G TG + +++A ++++ + +A A + Sbjct: 267 KLGLHCSPTCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAY 322 Query: 338 YARRRHVSGGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------- 381 Y +++ S I +P+ + R I D + +I A L + D Sbjct: 323 YEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHLIK 382 Query: 382 -EAKSRSEE---------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 E KS E A + P++KY+ + A+ ++A++ GGSGY E+ +A Sbjct: 383 IEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVA 442 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITI 486 R YR+S +I G+ ++ + + G + QL E +L KKV Sbjct: 443 RIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVWKD 502 Query: 487 LRDSISLCK 495 L SI L K Sbjct: 503 LDTSIGLYK 511 >gi|195396182|ref|XP_002056711.1| GJ10063 [Drosophila virilis] gi|194143420|gb|EDW59823.1| GJ10063 [Drosophila virilis] Length = 408 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 120/263 (45%), Gaps = 19/263 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D +A ++ + ++G Y LSG K W +S + ++ A ++ + + Sbjct: 149 LSEPGSGSDASAASTTAKFNANGDYLLSGTKAWISNSKEASGGLIFATIDKSLKHKGITA 208 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 L + GL + ++K+G R+++T +L S+ G G ++ ++ + Sbjct: 209 FLTEKDVPGLSVGKKESKLGMRASSTCQLTLDDVCVPQSHVLGTPGGGFKIAMESLDCGR 268 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I A S + +L A+ YA +R G L ++++ +AD+AL + A L+ Sbjct: 269 IGI----AAQSTGIAQAALELAVDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLT 324 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D ++EAA A++ A T +C + ++ +GG GY + + Sbjct: 325 WRAAWLKDHGLPITKEAAMAKLHASETATYCAH-------QCIQILGGMGYTTDLPAELY 377 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 YR + I G+ + + N Sbjct: 378 YRNARVTEIYEGTSEIQRIVIAN 400 >gi|13310129|gb|AAK18172.1|AF290950_4 FadFx [Pseudomonas putida] Length = 375 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKARARLDGDH-YVLNGSKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G+ G F+VP SP G R+++K+G ++ T ++ F N + L Sbjct: 170 TDPEAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVRVPVANRLG 224 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357 E KI L L+ + ++ V +A A YA R G LI+ + Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYAHERQSFGKALIEHQAVAF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A IA A + A D + A + A + K + +MA V ++A++ Sbjct: 282 RLADMATKIAVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+ + + R YR+ I G+ + Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|52080477|ref|YP_079268.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52785859|ref|YP_091688.1| hypothetical protein BLi02106 [Bacillus licheniformis ATCC 14580] gi|52003688|gb|AAU23630.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52348361|gb|AAU40995.1| putative protein [Bacillus licheniformis ATCC 14580] Length = 571 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 27/297 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + A T+ + L+G K W ++ ++D +++ A+ + F+V Sbjct: 148 LTEPGAGSDALNAKTTAVLNREGTAWILNGEKQWITNAQVADVYVVFAKTAEGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 R S G+ + K+G + ++T VE+ N G + +V+ + Sbjct: 208 R-----SFKGVSIGPEEKKMGIKGSSTATLILEEVEVPSDNVLGHIGKGHHVALNILN-- 260 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A ++ + +L A+ YA++R +I +++ IAD+A+ I A + Sbjct: 261 --MARLKLAFSNIGTAKQALNLAVSYAKQRKQFNKPIIGFSMIQEKIADMAVSIFGAESA 318 Query: 373 SFRLANSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++R A+ D R + I K +C ++ + EA++ GG GY+ Sbjct: 319 AYRTADCLDNVLDSALPLDDRLRKLTNYASECAINKVYCSEILGRIADEAVQIHGGYGYM 378 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 +E + R YR++ + I G+ L + LL K + + S E LGS G + Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTIAKLLMK--EVQQNGISEPEAQLGSEGNR 433 >gi|85703746|ref|ZP_01034850.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] gi|85672674|gb|EAQ27531.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 380 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + ++G Y L+G K F+S SDA++++ + G G + Sbjct: 124 LTEPGSGSDAAALKTRADRTNEG-YTLNGTKAFISGGGYSDAYVVMVRT-GSDGPKGIST 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 + + GL Y L++K+G RS T +++F N N+S+ + E+ K Y Sbjct: 182 VYVEAGTAGLSYGGLEDKMGWRSQPTRQVQFDNC--------NISSENMVGEEGKGFTYA 233 Query: 318 ---LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD +++S + L + + Y R G + ++ +AD+ +D+ AA Sbjct: 234 MSGLDGGRLNISACSLGAAQQGLTQTLRYMAERKAFGKPIDQFQALQFRLADMEIDLQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D +A A + K + + V+ + ++ GG GY+ + Sbjct: 294 RTFLRQAAWKLD------NDAPDATKFCAMAKKFVTETGSRVVNQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372 >gi|330823850|ref|YP_004387153.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329309222|gb|AEB83637.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 549 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 32/284 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 + +TE G+D+A + + + ++G + L+G K W + + +++A+ + G Sbjct: 270 IAMTEPDFGSDVAGLQLKATR-AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHR 328 Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300 G LV + +G G + R IG R + +L F N F + G Sbjct: 329 GLSLLLVEKPAFEGHEFAVAQEGGGTLHGRAIPTIGYRGMHSFDLVFENFFVPDENLVGG 388 Query: 301 DLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 D + G M ++ + +A ++ MR ++ AI YA R V G L+ + + Sbjct: 389 DAGLGKGFYFTMTGMMGGRMQTAGRALGVMRAAVRAAIRYAGDRQVFGAPLVSYQLTQVK 448 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IA +A A L++ +A D R E A + K C+ A V EA++ Sbjct: 449 IAAMAARFVACRWLAYDVARLLDAGGGRME--------ASLVKLLACRSAELVTREALQI 500 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460 GG GY EE +++R++ ++ SI G+ + L V+ +LLE+ Sbjct: 501 HGGMGYAEETAVSRYFVDARVLSIFEGAEETLALKVIARSLLEQ 544 >gi|329847548|ref|ZP_08262576.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] gi|328842611|gb|EGF92180.1| acyl-CoA dehydrogenase, C-terminal domain protein [Asticcacaulis biprosthecum C19] Length = 382 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 32/331 (9%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R P KA P + +G L ++E Sbjct: 69 HVIAMEEISRASASIGLSYGAHSNLCVNQINRNGTPEQKAKYLPKLISGDHVGALAMSET 128 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + + +D Y L+G K W + P +D ++ A+ + G + L + Sbjct: 129 GAGSDVVSMRLRADRKND-RYVLNGSKMWITNGPDADVLVVYAKTDMDAGSKGITAFLIE 187 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321 G + +K+G R + T EL F + + +LG ++ LD Sbjct: 188 KDFTGFSVAQKLDKLGMRGSHTGELVFEDCEVPYDNVLGTEGRGAAV-----LMSGLDYE 242 Query: 322 IMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + +SG MR L I Y R G + +M+ +AD+ AA A + + Sbjct: 243 RVVLSGGPLGIMRACLDAIIPYIHDREQFGQAIGTFQLMQGKVADMYSTWAACRAYVYAV 302 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + D ++ ++AA + A W + EA++C+GG+GY E + R +R+ Sbjct: 303 AQACDRGETTRKDAAGCILYAAEKATW-------MAGEAIQCLGGNGYTNEYPVGRLWRD 355 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + I G+G + + +L G LFE+ Sbjct: 356 AKLYEI--GAGTSEIRRML----IGRELFEE 380 >gi|326576565|gb|EGE26472.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis 101P30B1] Length = 608 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 52/331 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406 ++ + AL + L+ F + ++ E E +A ++ PI K + K Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTK 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497 + LGS G+ + + C+E+ Sbjct: 453 ------RKVLGSQGRMLANFTQIIHQFCQEN 477 >gi|260222383|emb|CBA31892.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial [Curvibacter putative symbiont of Hydra magnipapillata] Length = 393 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 34/291 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ + E+ +G L ++E G+D+ ++ + + G Sbjct: 109 TPEQRAKYLPKLITGEH--------------VGALAMSEPGAGSDVLSMKLKAED-KGGY 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G+K W + P +D ++ A+ E +G V L + S G + +K+G R + Sbjct: 154 YLLNGNKMWITNGPDADTLVVYAKSEPELGARGVTAFLIEKSMPGFSIAQKLDKLGMRGS 213 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEA 335 T EL F+N +LG +N K+L+ LD +SG M+ + Sbjct: 214 HTGELVFNNVEVPLANVLGQVNGGA------KVLMSGLDYERAVLSGGPLGIMQSVMDNV 267 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I Y R G + + +++ +AD+ + A A ++ +A + D +E R Sbjct: 268 IPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRAFAYTVAKNLDLLG--AEHVRQVRK 325 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + A + E ++ GG+GYI E + R +R++ I G+ Sbjct: 326 DCASVILWTAEKATWMAGEGVQIFGGNGYINEYPLGRLWRDAKLYEIGAGT 376 >gi|21229724|ref|NP_635641.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766601|ref|YP_241363.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|21111212|gb|AAM39565.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571933|gb|AAY47343.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] Length = 387 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRAEARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPSAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|152977528|ref|YP_001377045.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026280|gb|ABS24050.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 376 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 38/262 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-CFLV 258 LTE G+D ++ S+ I DG Y ++G K F+++ +D +I+ A G + Sbjct: 124 LTEPGAGSDAGSLKSRA--IKDGNQYVINGSKIFITNGGEADTYIVFASTNPEAGKSGIS 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 ++E G+P GL + ++K+G + TV+L F D+ V P E++ Sbjct: 182 AFIVEKGTP-GLIIGKDEHKMGLHGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA + YA+ R G + Q + +AD+A Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERKQFGKPIAAQQGVGFKLADMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A+ + +EA+ A++ A K A V EA++ +GG GY Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEASVAKLFA-------SKTAVEVAIEAVQVLGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 +E + R +R++ I G+ Sbjct: 343 TKEYPVERFFRDAKICEIYEGT 364 >gi|255318748|ref|ZP_05359975.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262378073|ref|ZP_06071230.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255304246|gb|EET83436.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262299358|gb|EEY87270.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 384 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 16/242 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A++ + K D Y L+G K F++ +P + AF ++A+ + G + Sbjct: 124 LTEPESGSDAASLRTTAVK-DDDFYILNGTKRFITNAPHAGAFTVMARTNSEIKGARGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 183 AFIIDSKTPGISLGKRDQKMGQKGAHTCDVIFENCRVPASALIGGVE-GVGFKTAMKVLD 241 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A +SV L +A+ YA R G + +++ +AD +I AA + Sbjct: 242 KGRLHIAALSVGAAVRMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEIYAAKCMVL 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D+ ++ S EA+ +K + +M V ++ GG+GYI E SI R Y Sbjct: 302 DAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYISEYSIERFY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|229591979|ref|YP_002874098.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|229363845|emb|CAY51303.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] Length = 382 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 28/290 (9%) Query: 168 PRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC 227 P V + AP++ S E I L +TE GG+D+A++ + + D Y Sbjct: 108 PEVRERVAPQVLSGEK-------------IIALAVTEPGGGSDVASLQTHATRDGDH-YR 153 Query: 228 LSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +SG K F++S + F +A G G + LL + G + K+G ++ T Sbjct: 154 VSGSKTFITSGIRADFYTVAVRTGGPGFAGISLLLIEKDTPGFSVGQPLKKMGWWASDTA 213 Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 EL F + G L+G N+ + L A+M+ +++L E++ +A +R Sbjct: 214 ELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANMTAQMALEESLKWAAQREA 273 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + V+K +A++A + + ++R A S +E + A+ +A T Sbjct: 274 FGKPIGKFQVLKHRLAEMATAVEVSREFTYRQAAKMAAGISVIKEISMAKNLATDT---- 329 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL-LGSGNAMVLD 453 A V +A++ +GG GY+ + R YR+ N IL +G G V++ Sbjct: 330 ---ADRVTYDAVQILGGQGYMRGSLVERLYRD---NRILSIGGGTREVMN 373 >gi|66811156|ref|XP_639286.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium discoideum AX4] gi|74854817|sp|Q54RR5|ACDSB_DICDI RecName: Full=Probable short/branched chain specific acyl-CoA dehydrogenase; Short=SBCAD gi|60467914|gb|EAL65927.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Dictyostelium discoideum AX4] Length = 413 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 25/273 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ + SDG + L+G K W ++ + FI++A V+ G + Sbjct: 154 LSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITA 213 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 + + + GL + ++K+G R+++T E+ N +LG+L KI I Sbjct: 214 FIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVKPTDILGELG------RGYKIAIE 267 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ + ++ + LA+ I Y R G + M+ AD+A+DI A Sbjct: 268 GLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQGMQFTYADLAVDIEAGRL 327 Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++ A R +EA + A + K C ++A + + +GG G+ +E Sbjct: 328 LTYNAA--------RIKEAGLPFVFQASMAKLHCSRVAEKAASACISMLGGVGFTKEFPA 379 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + +R+S I G+ N + + + K N Sbjct: 380 EKFFRDSKVGQIYEGTSNIQLQTIAKEIVKNFN 412 >gi|311070236|ref|YP_003975159.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] gi|310870753|gb|ADP34228.1| acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] Length = 379 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 28/270 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA-----QVEGRVG 254 GLTE G+D + + ++I D Y L+G K F+++ +D +I+ A Q + V Sbjct: 124 GLTEAGSGSDAGGMKTVAERIGDD-YLLNGSKIFITNGGAADIYIVFAVTDPEQRKKSVT 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V + E G + + K+G RS+ T E+ F + L+ N E KI Sbjct: 183 AFIVEKGFE-----GFSIGKKEKKLGIRSSPTTEIIFEDC---LVPAKNRLGEEGEGFKI 234 Query: 315 LI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD ++ V +A+ A+ YA+ R G + +Q + +AD+A I A Sbjct: 235 AMSTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKPVAEQQAIAFKLADMATMIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L+++ A + +A ++++A T A V EA++ GG GY ++ Sbjct: 295 SRLLTYQAAWLESSGLPYGKASAMSKLLAGDT-------AMKVTTEAVQIFGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R+ R++ I G+ L + +L Sbjct: 348 PVERYMRDAKITQIYEGTQEIQRLVISRML 377 >gi|254440209|ref|ZP_05053703.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] gi|198255655|gb|EDY79969.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] Length = 378 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 16/255 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ ++D Y L+G+K F+S SDA+I++A G G + Sbjct: 124 LTEPASGSDAASLKTKAD-VTDTGYALTGNKAFISGGGYSDAYIVMAST-GVSGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNTFG-FLLGDLNVSTGPVEDMKILI- 316 + + G+ + L++K+G RS T V+LE N G LLG ++ G MK L Sbjct: 182 FVVESGAEGVSFGGLEDKMGWRSQPTRQVQLEKCNISGDNLLGVID--QGFKYAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ + +L + IHY R G L ++ +AD+ +D+ +A + Sbjct: 240 GRLNIAACSIGAAQSALDKTIHYMAERQAFGQSLDQFQALQFRLADMEIDMQSARTFLRQ 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D A + + K C + + + ++ GG GY+ + I + R Sbjct: 300 AAWKLDCQDPD------ATVFCAMAKKLCTETGSRIADQCLQLHGGYGYLADYGIEKIVR 353 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 354 DLRVHQILEGTNEIM 368 >gi|157694120|ref|YP_001488582.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032] gi|157682878|gb|ABV64022.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032] Length = 380 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D + + K + Y L+G K F+++ ++D +I+ A + Sbjct: 125 LTESGSGSDAGGMRTTAVK-AGSEYVLNGAKIFITNGGIADYYIVFAVTDQEAASRNTTA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + G + ++K+G RS+ T E+ F + + + N E KI ++ LD Sbjct: 184 FIVEKETPGFSVGKKESKLGIRSSPTTEIRFEDC---RIHEKNRLGQEGEGFKIAMMTLD 240 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 ++ V +A+ A+HYA+ R G +I Q + +AD+A I A+ L++ Sbjct: 241 GGRNGIAAQAVGIAQGALDAAVHYAKERKQFGKPIIQQQGIAFKLADMATAIEASRLLTY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A + +E+A +++ A T A V EA++ GG GY ++ + R+ Sbjct: 301 QAAWLETKGLPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGYGYTKDYPVERYM 353 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 354 RDAKITQIYEGT 365 >gi|295707242|ref|YP_003600317.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] gi|294804901|gb|ADF41967.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] Length = 377 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 28/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 PM GLTE G+D + + + DG Y L+G K F+++ +D +++ A Sbjct: 113 PMATGEKIGAYGLTEPSAGSDAGGMRTLA--VKDGEDYILNGSKIFITNGGEADIYVVFA 170 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + E R F++ + + G + + K+G RS+ T E+ F + + N+ Sbjct: 171 RNDPNEKRTSAFIIEKDMP-----GFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENL 222 Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 E K+ ++ LD ++ V +A+ A+ YA+ R G +I Q + Sbjct: 223 LGNEGEGFKVAMMTLDGGRNGIAAQAVGIAQGALDAAVAYAKERQQFGKPIISQQGIAFK 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A I AA L+++ A + +E+A ++K + A V EA++ Sbjct: 283 LADMATSIEAARLLTYQAAWLESQGLPYGKESA-------MSKLYAGDTAMKVTTEAVQV 335 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + L K Sbjct: 336 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRYLAK 377 >gi|295675288|ref|YP_003603812.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] gi|295435131|gb|ADG14301.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. CCGE1002] Length = 376 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 32/273 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLA 247 P+ + + LTE + G+D +A+ + + DG Y L+G K F++S + D I++A Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATR--DGAAYVLNGVKQFITSGKNGDVAIVMA 168 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295 + G F+VP S G R+++K+G S+ T ++ F +N Sbjct: 169 VTDKTAGKRGISAFIVPT-----STPGYVVARVEDKLGQHSSDTAQIVFEECRVPAANLI 223 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G ++ +E +I I A SV R + A+ YA+ R G L + Sbjct: 224 GAEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALTYAKERESFGAPLFSHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+A + AA L + A+ D + EAA A++ A + A + + A Sbjct: 280 QFRLADMATQLEAARQLIWHAASLKDTGQPCLTEAAMAKLFA-------SEAAERICSAA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ GG GY+ + + R YR+ I G+ + Sbjct: 333 LQIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|218894289|ref|YP_002443159.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218774518|emb|CAW30335.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 596 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + +D+ K+ S E+ T + LTE + GTD+A + ++ + +DG Y +S Sbjct: 143 LRRDYLGKLVSGEWAGT-------------MCLTEPQAGTDLALLRTRAEAQADGSYAIS 189 Query: 230 GHKWFLSSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLLED-----GSPNGLCY 272 G K F+S D ++LA+ V+G + FLVP+ + + G N L Sbjct: 190 GSKIFISGGEQDLTENIVHLVLARLADAPAGVKG-ISLFLVPKFVANPDGSLGERNSLGC 248 Query: 273 QRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 +++K+G + +T + F G+LLG N + M ++ A V + + Sbjct: 249 GAIEHKMGIKGASTCVMNFDGARGWLLGQANQGLACMFTM-----MNDARFQVGLQGLGI 303 Query: 333 AE-----AIHYARRRHVSGGILIDQ-------PVM-----------KRAIADIALDIAAA 369 AE A+ YAR R S ++ Q P++ ++ + + +A+ Sbjct: 304 AERAFQGALGYARERLQSRALVGPQAPDKVADPIIVHPDVRRMLLTQKTLVEGCRMLASC 363 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A L + +A R A ++ PI K + + V + ++ GG G+I E Sbjct: 364 CARQLDLEHGHPDADGRRAATRRAALLIPIVKAFLTDVGQEVASLGVQVYGGHGFIREWG 423 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + + R+S I G+ LD++ Sbjct: 424 MEQLMRDSRITQIYEGTNGIQALDLV 449 >gi|289661727|ref|ZP_06483308.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 597 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 58/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A + V + L+E A+ Y+R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 459 ASQAAGLKLFLADVETFAKAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|325285451|ref|YP_004261241.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489] gi|324320905|gb|ADY28370.1| Isovaleryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489] Length = 389 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + +K D Y L+G K F+++ + +D ++ A+ +G + Sbjct: 125 LCVTEPFGGSDVAGMRTTAEKKGD-TYVLNGSKTFITNGVYADYMVVAAKTSPELGNKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + D + G+ +L NK+G R++ T E+ F N L+G+ + L Sbjct: 184 SIFMVDKNTVGVSASKL-NKLGWRASDTAEIAFDNVTIPAANLMGEEGKGFSYIMQHFAL 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + + +L A Y R G + ++ +D+ D+ ++ Sbjct: 243 ERLVMGVNAHARAEFALDYARQYMSERSTFGKTIDKYQALRHTYSDLYADMEICREYNYS 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A ++ + +EA I+K KMA VI ++ +GG GY+E+ +AR R Sbjct: 303 VAYRLNKGEYVVKEAT-------ISKLKSTKMADEVIYGCLQFLGGYGYMEDYPMARMLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|315925783|ref|ZP_07921990.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620892|gb|EFV00866.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] Length = 377 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++T+ + D Y ++G K F+++ ++D +++ A V+ G + Sbjct: 121 FGLTEPNAGSDAGSVTTTAELDGDH-YVINGRKTFITNGGVADVYVVFASVDKSKGLKGL 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G+ + +NK+G R + T ++ F N ++ N+ E KI ++ Sbjct: 180 SAFIVEKKTPGISVGKEENKMGIRLSNTTDVVFDNV---VIPRANLLGKEGEGFKIAMMT 236 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD A V + +A E I Y + R G + V++ +AD+ + AA A+ Sbjct: 237 LDLARPFVGAIACGIAQRAINECIAYMKERVQFGKPIAKLDVLRNKLADMEIKKEAAVAM 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + D K S EAA I K + A V EA++ GG GY E + + Sbjct: 297 VEHVFKMIDLGKRYSREAA-------IAKAFAGDTAVEVAMEAIQIHGGYGYSREYPVEK 349 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 350 LLRDAKIFQIFEGT 363 >gi|256059546|ref|ZP_05449745.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|261323514|ref|ZP_05962711.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|261299494|gb|EEY02991.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|319787232|ref|YP_004146707.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] gi|317465744|gb|ADV27476.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 385 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 24/258 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257 L ++E G+D+ ++ DG++ +G+K W + P +D ++ + G+ G Sbjct: 124 LAMSEPGAGSDVVGSMRCSAELRDGVWIANGNKMWITNGPEADVLLVYMRTAGKEAGSRC 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + + + G + +K+G R + T EL F N +LG++N + +++ Sbjct: 184 MTAFIVERGMRGFSTAQKLDKLGMRGSNTCELVFDNCEIPQENVLGEVN------QGVRV 237 Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LD+ + ++G M+ +L A+ Y R R + +M+ IAD+ + + Sbjct: 238 LMSGLDTERLVLTGGPIGLMQSALDIALPYVRERKQFDAAIGTFGLMQGKIADMYTALQS 297 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A ++++A FDE + RS AA ++ + A V E ++ +GG+GYI E Sbjct: 298 SRAFAYQVARDFDEGR-RSRAAAAGCLLH------ASEAAVQVALEGIQALGGNGYINEY 350 Query: 429 SIARHYRESPANSILLGS 446 R R++ +I G+ Sbjct: 351 PAGRILRDAKLYAIGAGT 368 >gi|121535631|ref|ZP_01667437.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] gi|121305801|gb|EAX46737.1| acyl-CoA dehydrogenase domain protein [Thermosinus carboxydivorans Nor1] Length = 377 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 20/265 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-FL 257 LTE G+D A+ + K D Y L+G K F+++ ++D +++ A G L Sbjct: 121 FALTEPGAGSDAGAVATSAVKDGD-YYVLNGTKCFITNGGIADIYVVFANARKSAGIRGL 179 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 ++E +P G + ++K+G R++ T EL N + N E KI + Sbjct: 180 TAFIVERDTP-GFSVGKDEDKMGIRASNTCELILDNV---RIPAANRIGREGEGFKIAMK 235 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+A V + V LA+A + Y+R R G + +++ IAD+A+ I AA Sbjct: 236 TLDAARPFVGAVSVGLAQAAFELAVKYSREREQFGKPIASFQLVQAMIADMAMQIEAARL 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ D+ ++EAA A+ A T A V + ++ +GG GY ++ Sbjct: 296 LVYKACWMKDQGLPYAKEAAMAKCFAADT-------AMKVTTDVVQVLGGYGYTKDYPAE 348 Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456 ++ R++ I G+ L + N Sbjct: 349 KYMRDAKIMQIYEGTNQIQRLVIAN 373 >gi|319785584|ref|YP_004145060.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171472|gb|ADV15010.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 390 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 45/296 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229 K W PK+ + E IG + +TE G+D+ + ++ QK DG Y ++ Sbjct: 119 KKWLPKLATGEL--------------IGAIAMTEPGAGSDLQGVKTRAQK--DGNQYKIN 162 Query: 230 GHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 G K F+++ FI++ +G G L+ ++E G R +KIG ++N Sbjct: 163 GSKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFQRGRNLDKIGLKAND 220 Query: 286 TVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 T EL F SN G G G V+ M+ L L +++ + +LA I Sbjct: 221 TSELFFNDMRVPTSNLLGHEEGQ-----GFVQLMQQLPQERLQIGTGAIAMIERALALTI 275 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y + R G +ID + +A++ + +++ +R + Sbjct: 276 DYVKERKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVARHIAGGLDPVT 328 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A + KYW + V+ E ++ GG GY+ E IAR +R++ I G+ M L Sbjct: 329 ASMAKYWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 384 >gi|297560543|ref|YP_003679517.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844991|gb|ADH67011.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 598 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 68/332 (20%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + L+E + G+ +A IT++ ++ +G Y L G+K ++S+ + + Sbjct: 152 PMVEGRFTGTMCLSEPQAGSSLADITTRAEEDGEGGYRLFGNKMWISAGDHELTENIVHL 211 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS- 292 +LA++ G + F+VP+ L + G N + L +K+G R L F Sbjct: 212 VLAKIPGGPPGVRGISLFVVPKYLLEADGTIGERNDVVPAGLNHKMGYRGTVNAMLNFGE 271 Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYL----------DSAIMSVSGMRVSLA 333 G+L+G+ P + +K + ++ +A + +G SLA Sbjct: 272 GRHAPGGRPGAVGYLVGE------PHQGLKYMFHMMNGARIGVGAGAAAVGYTGYLKSLA 325 Query: 334 EAIHYARRRHVSGGILIDQ-------PVM-----KRAIADIALDIAAATALSFRLANSFD 381 YAR R + G L D+ P++ +R + + A AL A D Sbjct: 326 ----YARER-LQGRPLGDKDPGQPQVPIVEHTDVRRMLLAQKSYVEGALALVLYCARLVD 380 Query: 382 EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 E S ++ A R ++ PI K W + + A++ GG GY E + +HYR Sbjct: 381 ETASAEDDKARERAHLLLDVLTPIAKSWPSQWCVEANSLAIQVHGGYGYTREYDVEQHYR 440 Query: 436 ESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 ++ N I G+ LD+L +L+ G+ L Sbjct: 441 DNRLNPIHEGTHGVQALDLLGRKAVLDGGSRL 472 >gi|326385218|ref|ZP_08206884.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196077|gb|EGD53285.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 608 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 42/286 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A T++ + DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGTTKATQQEDGTWHIEGVKRFITSADQDMTENIFHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLG 300 + F VP+ D G NG +++K+G +++AT E+ F + G+L+G Sbjct: 224 KGLSLFFVPKFHFDHETGELGDRNGAFVTGVEHKMGIKASATCEVSFGLHGTPAKGWLVG 283 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--------- 351 +++ + D+ + ++S + A+ YA+ R V G L Sbjct: 284 EVHKGIAQMFDVIEHARMMVGTKAISTLSTGYLNALEYAKER-VQGADLTQMMDKAAPRV 342 Query: 352 ----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPIT 400 P ++RA+ A+ A+ D A ++ A A ++ PI Sbjct: 343 TITHHPDVRRALLTQKAYAEGLRAVYLYTASHQDPAAAQIVSGADAEMAHKVNDLLLPIV 402 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + A + E+++ +GGSG++++ I ++ R+S +S+ G+ Sbjct: 403 KGVGSERAYEKLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGT 448 >gi|317483816|ref|ZP_07942756.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924919|gb|EFV46065.1| acyl-CoA dehydrogenase domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 371 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 21/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + LTE G+D+ AI + + + G Y ++GHK F+++ +D +I+ A+ Sbjct: 106 PMLRGDKLGAFALTEPEAGSDVGAIATTAE-LDGGFYVINGHKIFITNAGRADIYILFAR 164 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G+ G + + GL + K+G R T EL N + D + P Sbjct: 165 TGGQ-GTEGLSAFVVCSDDAGLLISAPQRKMGIRGAQTCELFLRNLC--IPADRLIGR-P 220 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAEA------IHYARRRHVSGGILIDQPVMKRAIAD 361 + +I + LD + ++ V +A+A + RR G L ++ AD Sbjct: 221 GDGFRIAMETLDGGRLGIAAQAVGIADAAFDEACVRLKERRQF-GRTLEHFQGLRWKAAD 279 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L+ A D K EA+ A+++A WC +EA++ GG Sbjct: 280 MWAKVEAARQLTLYAARLRDGGKRFRAEASAAKLVASEAAVWCA-------SEAVQICGG 332 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 SGY++ R YR++ I G+ Sbjct: 333 SGYLQGSVAERLYRDAKITQIYEGT 357 >gi|289668680|ref|ZP_06489755.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 597 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 79/355 (22%), Positives = 149/355 (41%), Gaps = 56/355 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTENIVHLVLAKLPDAPAGA 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KGISLFVTPKFKVDRDGTVGERNALHCGSVEHKMGIKGSVTCVMNFEGAQGYLVGQ---- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV- 354 P + ++ + +++A + V + L+E A+ Y+R R +SG D+P Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPAD 339 Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401 ++R + I + L+ A+ D A + R++ + PI+K Sbjct: 340 PIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGGTEQERTDAETLVSFLTPISK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---- 457 + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 400 ACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAA 459 Query: 458 -LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 460 SQAAGLKLFLADVETFAKAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|330806831|ref|YP_004351293.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374939|gb|AEA66289.1| Putative acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A+ ++ +K+ G Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKVEGG-YSLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ + + G + F +LE G GL + K+G R++ T E+ N F Sbjct: 174 SPIADVFVVWGKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDNVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 + D+ GP L+SA +S + AE A Y R G Sbjct: 229 VPEENIFPDVRGLKGP------FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 336 SLDIARMARDMLGGNGISDEFGVARH 361 >gi|224367429|ref|YP_002601592.1| acyl-CoA dehydrogenase family protein [Desulfobacterium autotrophicum HRM2] gi|223690145|gb|ACN13428.1| acyl-CoA dehydrogenase family protein [Desulfobacterium autotrophicum HRM2] Length = 601 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 36/312 (11%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S+E T PM + LTE G+ ++ IT+ G Y + G K F+S+ Sbjct: 142 SKELIDTYLPPMLAGRWQGTMALTEPHAGSSLSDITTTAFPTDKGFYAIKGQKTFISAGD 201 Query: 240 SDAF-----IMLAQVEGR------VGCFLVPRLL-EDGSP---NGLCYQRLKNKIGNRSN 284 D +MLA++EG + F+VP+L E G N + + +K+G R Sbjct: 202 HDGVDNVVHLMLARIEGEPAGSKGISLFVVPKLRPETGGKFVSNDVVVAGVYHKLGYRGA 261 Query: 285 ATVEL---EFSNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIH 337 EL E ++ GFL+G+ N + M ++ + L + ++ + +L A+ Sbjct: 262 PITELSIGEKNDCRGFLVGEKNRGLACMFQMMNEARLGVGLGATAIATAAYYAALDYAME 321 Query: 338 YARRRHVSGG-------ILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAK 384 + R +S +I+ P +KR AI + +L + L LA + + Sbjct: 322 RPQGRRLSEKNPATPQVPIIEHPDVKRMLLFQRAIVEGSLSLCLQCCLYTDLAKT-TQGD 380 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + ++ PI K + +M ++A++C GG GY E+ + +++R+S + I Sbjct: 381 EQQRNLLLLDLLTPIAKSYPSEMGILSTSQAIQCFGGYGYCEDFPVEQYFRDSRIHPIHE 440 Query: 445 GSGNAMVLDVLN 456 G+ +D+L Sbjct: 441 GTTGMQGMDLLG 452 >gi|255952857|ref|XP_002567181.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588892|emb|CAP95007.1| Pc21g01100 [Penicillium chrysogenum Wisconsin 54-1255] Length = 429 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 5/251 (1%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +++ DG + L+G K W + P +D ++ A+ E +G + Sbjct: 163 LAMSEHSAGSDVVSMKTTAKEV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPELGSKGI 221 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G R +K+G R + T EL F + F LLG++N + + L Sbjct: 222 TAFLVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFVPRENLLGEVNRGVRVLMEGLDL 281 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + M+ +L + Y R G + +++ +AD+ +AA+ A ++ Sbjct: 282 ERLVLSAGPLGIMQAALDLVLPYTHVRKQFGAPIAHNQLVQGKLADMYTKLAASRAYTYA 341 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D A E + + A +A++ +GGSGYI E R R Sbjct: 342 TARQVDNAAVEPGELTVRTQDCAGAILYAAERATECTLDAIQLMGGSGYINEIPAGRLLR 401 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 402 DAKLYEIGAGT 412 >gi|85710062|ref|ZP_01041127.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1] gi|85688772|gb|EAQ28776.1| isovaleryl-CoA dehydrogenase [Erythrobacter sp. NAP1] Length = 443 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 120/256 (46%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + G Y L+G K W ++ +D ++ A+ +G G + Sbjct: 184 LAMSEASAGSDVVSMKLKAEAVQGG-YVLNGTKFWITNATYADTLVVYAKTDGNAGSRGI 242 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G + K+G R + T EL F + ++G LN G ++ Sbjct: 243 TAFLIEKDDEGFSIGQKIEKVGMRGSPTAELVFDDCHIPEDRVMGPLNGGVGV-----LM 297 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++G+++ + +A I Y R R G + +M+ +AD+ + + A Sbjct: 298 SGLDYERVVLAGLQLGIMQACLDTVIPYLRERKQFGKPIGSFQLMQAKVADMYVALQTAR 357 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A ++ +A + D ++ +AA + A + + V AE+++ +GG+GY + + Sbjct: 358 AYTYAVAKACDADQTTRFDAAGVILYASESAF-------KVAAESVQALGGAGYTLDWPV 410 Query: 431 ARHYRESPANSILLGS 446 R+ R++ I G+ Sbjct: 411 ERYMRDAKLLDIGAGT 426 >gi|304393471|ref|ZP_07375399.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] gi|303294478|gb|EFL88850.1| acyl-CoA dehydrogenase [Ahrensia sp. R2A130] Length = 599 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/300 (21%), Positives = 136/300 (45%), Gaps = 43/300 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQV----- 249 + LTE + G+D+ A+ S+ + + DG Y + G K +++ M+D + +LA++ Sbjct: 160 MNLTEPQAGSDLNALKSRAEPVGDGSYRVFGQKIYITYGEHEMTDNIVHLVLARLPDAPA 219 Query: 250 -EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLG 300 + V FLVP++LEDG+ N + +++K+G ++ T + + + G+L+G Sbjct: 220 GQRGVSLFLVPKVLEDGTRNDVYCHSVEHKLGIHASPTCTMLYGDGKFGDEPGAIGWLIG 279 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGGI-------LID 351 + N + M + AI + + +A+ YA RR+ + G +I Sbjct: 280 EENRGLACMFTMMNNARIMVAIQGTAVAEAATQKALAYAQERRQGKAEGFDGEGMAPIIH 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA---------------YARIM 396 P ++R IA + A+ +++ A++ A + +A A ++ Sbjct: 340 HPDVQRNIATMRALTNASRTIAYNCAHAIARADELNHASARNGGEPTPEMPFWQNRAALL 399 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 P+ K + + V + ++ GG G++EE A+ R++ I G+ +D++ Sbjct: 400 TPVAKAFATDIGCEVASIGVQVHGGMGFVEETGAAQLLRDARIAPIYEGTNGIQAIDLVT 459 >gi|254428827|ref|ZP_05042534.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196194996|gb|EDX89955.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 379 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/381 (23%), Positives = 149/381 (39%), Gaps = 55/381 (14%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P ++W+K E P L + +GL C V + + A L A Sbjct: 24 PHYDQWEKAEMFP--RELWNKMGENGLLC---------VDVPEEYGGFGANFRLSA---- 68 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDW-APKIFSREYDPTNKA--PMQKTSVAIG-LGLTE 204 ++ + A AL + VH D AP I + +A P T A+G +G+TE Sbjct: 69 --VIVEEASRAGFGALASNISVHSDIVAPYILHLGNEEQKQAWLPKMVTGEAVGAIGMTE 126 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263 G+D+ + ++ K DG Y +SG K F+++ D ++ + + G + Sbjct: 127 PGAGSDLQGMKTRADKDGDG-YSISGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTV 185 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPV 309 D + +G R K+G+ + T EL F N F L+ +L P Sbjct: 186 DCALDGFARGRNLEKMGHHAADTSELFFENVKVGADQILGGEGKGFANLMNEL-----PR 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E LI AI + GM + I Y + R G + + +AD+ + Sbjct: 241 ER---LILALGAIAACEGM---IERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVVN 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + + +D RSE A A I K ++ V + ++ GG GY++E Sbjct: 295 RAYGEQCIDQYD----RSELTA---TNASIAKLTTTELQGVVADKCLQLFGGYGYMQEYP 347 Query: 430 IARHYRESPANSILLGSGNAM 450 I+R Y ++ I G+ M Sbjct: 348 ISRDYVDARIQRIYGGTSEIM 368 >gi|325121806|gb|ADY81329.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 600 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 79/356 (22%), Positives = 149/356 (41%), Gaps = 45/356 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ I ++ + +G Y + G K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGLIRTKAEPNPNGSYSIMGEKIFISAGEHDLSENIIHIVLARLPQAPTGT 225 Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + +DG N + +++K+G NAT L F G+L+G N Sbjct: 226 KGISLFIVPKFNVSDDGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ +S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEISFQGALSYAKERLAMRSLSGPQYPEKNADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKM 407 ++ + AL++ LA D +S +++ + PI K + + Sbjct: 346 AVRSMLMTQKAFSEGGRALAYFLAQHVDIVESSNDQQQQKHSDELLAFLTPIAKAFLTES 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---------NLL 458 ++ GG G+I E + + R++ +++ G+ LD+L LL Sbjct: 406 GNESAKHGVQVFGGHGFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLL 465 Query: 459 EKGTNLFEQLFSTLEQD--LGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + T+L +Q + + L +K+ + + +SL K A+ E+I AS Sbjct: 466 KNMTDLIDQFIGQQQSNEVLKPYLEKLAELKQQWLSLTKTIADKAKHNPEEIGAAS 521 >gi|262376571|ref|ZP_06069800.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308710|gb|EEY89844.1| acyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 431 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 28/226 (12%) Query: 224 GIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 G Y + G K L +D +++ A ++GR F+V R + + +G + Sbjct: 222 GHYLIRGQKTLVLLGESADLYLVSADLDGRAEVFVVQR-------DSTITAKKSPAMGLK 274 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 + TV L+F NT + LGD ED ++D + M V EA+ + Sbjct: 275 ATETVTLKFENTPAYRLGD--------EDFDYRAFVDLGNLMWCAMAVGTCEAVKKYCVQ 326 Query: 343 HVSGGILIDQPVMKRA-----IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 + + I +P+ R IAD+A++I A L A+ + ++ EA AR++ Sbjct: 327 YANERIAFGEPISHRQSVAFMIADMAIEIDAMQMLILNAASLAESGQAFHREAYIARLL- 385 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 C + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 386 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 425 >gi|294626972|ref|ZP_06705562.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598634|gb|EFF42781.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 408 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 148 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 205 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 206 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 262 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 263 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 322 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 323 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 376 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 377 RDSRVHRILEGTNEVMRMIVARHLLNG 403 >gi|254480257|ref|ZP_05093505.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214039819|gb|EEB80478.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 589 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 30/323 (9%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQG 218 +AL P + A I + + + ++K + +G LTE G+D+ + ++ Sbjct: 124 MALGLAPMLSSGAALAIHAHGTEAQKQTYLEKMNTGQWMGTMNLTESGAGSDLGVMKAKA 183 Query: 219 QKISDGIYCLSGHKWFLS-----SPMSDAFIMLAQV----EGRVGC--FLVPRLL--EDG 265 D Y +SG K +++ S + ++LA++ EG G F+VP+ L +DG Sbjct: 184 VPEGD-HYRISGQKIYITWGDHQSTENIIHLVLAKLPDAPEGSRGISLFIVPKFLVNDDG 242 Query: 266 S---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLD 319 S N + ++K+G + T + F + G+LLG+ N + M Sbjct: 243 SLGERNDVYPVSCEHKLGIHGSPTCVMAFGDDEGAIGYLLGEKNRGLACMFTMMNEARHK 302 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLAN 378 + ++ SL +A YAR R V GG+ +I+ P +KR + + A L++ A Sbjct: 303 VGVQALGASEGSLQKAAAYARDR-VQGGVPIIEHPDVKRMLLTMKSMCEAMRGLAYTEAV 361 Query: 379 SFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + D A + R + + +M P+ K W ++A V + ++ GG G++EE A++ Sbjct: 362 TMDLAHRGPQEDRPLQQSRIDLMIPVIKGWLSEVAQEVTSLGLQVHGGMGFVEETGAAQY 421 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R+ I G+ D+++ Sbjct: 422 LRDVRITPIYEGTNGIQAADLVS 444 >gi|326330373|ref|ZP_08196683.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325951910|gb|EGD43940.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 386 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 20/267 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIML 246 AP+ L+E+ G+D A++ ++ + DG + LSG K W ++ +SD + +L Sbjct: 116 APLAAGKSTFSYALSEREAGSDTASMKTRA--VQDGDHWVLSGQKSWISNAGISDYYTVL 173 Query: 247 AQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 A + GR G + ++E S +G + K+G + + T EL F + L GD + Sbjct: 174 AVTDPDGRRGSNISAFVVEK-SDDGFAIGAPEKKLGIKGSPTCELTFDAVY--LPGDRII 230 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 L LD ++++ V +A+ A Y + R G + D ++ + Sbjct: 231 GEPGTGLQLALRTLDHTRITIAAQAVGIAQGALDHATDYVKERQQFGKRIADFQGIQFML 290 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A+ + AA L + A AKS +A+ K + A + +A++ + Sbjct: 291 ADMAMKLEAARQLVYVAA-----AKSE-RDASDLSFFGAAAKCFASDAAMEITVDAVQLL 344 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GGSGY ++ + R R++ I G+ Sbjct: 345 GGSGYTQDFPLERMMRDAKITQIYEGT 371 >gi|295394569|ref|ZP_06804789.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] gi|294972579|gb|EFG48434.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 33/305 (10%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S A + + T K W P + S E + + +TE G+D+ A+ Sbjct: 96 STIVAHYINAIGTEEQKKRWLPGLASGE-------------LVGAIAMTEPGTGSDLQAV 142 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGL 270 ++ + G Y ++G K F+S+ +D I++A+ G G L+ + D G Sbjct: 143 KTKA-VLDGGEYVINGAKTFISNGTHADIVIIVARTNDQPGGKGLSLIVAEVND--LPGF 199 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325 R+ +K+G R T EL F + LLG + G + M+ L L A+ V Sbjct: 200 SRGRVLDKVGQRGQDTRELFFEDMRVPAENLLGGVE-GKGFIHLMQQLPQERLALAVTGV 258 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + ++ + YA+ R G ++ K +A+ A D AA L + E K Sbjct: 259 TTAEYAVRLTVDYAKEREAFGRPILGFQNTKFVLAECATDTFAARTFVDHLVSQHIEGKL 318 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 +E+A+ KYW + VI ++ GG GY+ E IAR Y ++ I G Sbjct: 319 TTEQASAG-------KYWATDIQNTVIDRCVQVFGGYGYMLEYPIARMYADARVQKIYGG 371 Query: 446 SGNAM 450 + M Sbjct: 372 TNEIM 376 >gi|85858067|ref|YP_460269.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB] gi|85721158|gb|ABC76101.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus aciditrophicus SB] Length = 414 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 35/271 (12%) Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250 +K+++ TE G+D+ A+ ++ K D Y ++G K F+++ ++D + A + Sbjct: 147 EKSTLMTAFAATEPGAGSDLLAMKTRAVKKGDK-YVINGQKCFITNGSVADILTVWAYTD 205 Query: 251 GRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--------------TF 295 G + ++E G+P GL Y + K+G R EL F + F Sbjct: 206 PSKGAKGMSTFVVERGTP-GLIYGHNEKKMGMRGCPNSELFFEDLEVPAENLVGEEGKGF 264 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +L+G L+++ ++ S + ++ + +L A+ + R R G + + Sbjct: 265 AYLMGALSINR---------VFCASQAVGIA--QGALERAMQHTREREQFGKPIAHLTPI 313 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + IAD+A ++ AA L R A + +AK + ++ + K + A V +A Sbjct: 314 QFMIADMATEVEAARLL-VRKATTLLDAKDKR-----GPLIGGMAKTFASDTAMKVTTDA 367 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ +GGSGY++E + R RE+ I G+ Sbjct: 368 VQVMGGSGYMQEYQVERMMREAKLTQIYTGT 398 >gi|332976502|gb|EGK13345.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 606 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 52/343 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T+ + LM T + PK+ + T + LTE + GT Sbjct: 126 MYPGLTTGCINTLMQYGTEEQKDTYLPKLVEGTWSGT-------------MCLTEPQAGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+ + ++ DG Y L+G K F+SS D I+LA++ EG G F+V Sbjct: 173 DLGQVKTKAVPQEDGTYKLNGTKIFISSGEHDLTDNIIHIVLARLPDAPEGTRGISLFIV 232 Query: 259 PRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ E G NG+ +++K+G S+AT L F + G+L+G+ + + Sbjct: 233 PKFNVNEEGEAGERNGVSCGSIEHKMGIASSATCVLNFDDATGYLIGEPHRGLKAMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQPVMKRAIAD 361 + + I ++ ++ A+ YA+ R +SG +I+ ++R + Sbjct: 293 NTARIGTGIQGLAHCELAFQNALPYAKERRSMRTLSGVKEPEKVADAIINHADVRRMLLT 352 Query: 362 IALDIAAATALSF---RLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVI 412 + ++ + R A+ + + + + + PI K + ++ Sbjct: 353 MKSFAEGGRSMIYHAARYADKMSQGIAEGNDEEFEKWDDKLGFYTPILKGFLTELGIEAA 412 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 E + GG GYI+E + R++ ++ G+ LD+L Sbjct: 413 KEGQQVYGGHGYIKEWGMELIARDARIATLYEGTTGVQALDLL 455 >gi|328543528|ref|YP_004303637.1| acyl-CoA dehydrogenase family member 8 [polymorphum gilvum SL003B-26A1] gi|326413272|gb|ADZ70335.1| Acyl-CoA dehydrogenase family member 8 [Polymorphum gilvum SL003B-26A1] Length = 379 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR----VGC 255 LTE G+D A++ ++ ++DG Y L+G K F+S SD ++++A+ G + C Sbjct: 124 LTEPGSGSDAASLRTRA--VADGDHYVLNGSKAFISGGGTSDVYVVMARTGGEGPKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 +V E G+P GL + + K+G +S T ++ F + + N+ E +I Sbjct: 182 LVV----EKGTP-GLSFGAQEVKLGWKSQPTAQVNFEDC---RVPKANLVGTEGEGFRIA 233 Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ S+ + L A+ Y + R G L + ++ +AD+A ++ AA Sbjct: 234 MAGLDGGRLNIGACSLGAAQTCLERAVAYMKERRQFGRALAEFQALQFRLADMATELEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A D +++ EA MA K + V+ EA++ GG GY+ + Sbjct: 294 RLLLHKAAVLVD---AKAPEATRTAAMA---KRLATDVGFTVVNEALQMHGGYGYLRDYP 347 Query: 430 IARHYRESPANSILLGSGNAMVLDV 454 I R R+ + IL G+ M L V Sbjct: 348 IERFLRDVRVHQILEGTNEIMRLIV 372 >gi|325925092|ref|ZP_08186512.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] gi|325544508|gb|EGD15871.1| acyl-CoA dehydrogenase [Xanthomonas perforans 91-118] Length = 597 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 58/356 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ DGS N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVGRDGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y+R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 G LF T QD ++ + I LRD C E L R + ++ A Sbjct: 459 ASQAAGLKLFLADVETFANAQDGNAALAEFIKPLRDK---CSEWAMLTRDVLDRAA 511 >gi|312200902|ref|YP_004020963.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311232238|gb|ADP85093.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 622 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 98/459 (21%), Positives = 191/459 (41%), Gaps = 84/459 (18%) Query: 139 RLYLMAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 RL++ A L G L +P + AS + L + P V A F+ D +K + Sbjct: 94 RLFVPAHL--GGLGAPPTVAWAASELILGSNPAVFMYMAGPTFAGILDQLGTESQKKFAA 151 Query: 197 -------AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFI 244 + LTE G+D+ A ++ + DG + + G K F++S P + + Sbjct: 152 QAVERQWGATMVLTEPDAGSDVGAGRTRAVQQPDGTWHIEGVKRFITSGDWDIPENIFHM 211 Query: 245 MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ EG + F+VP+ + D G+ NG+ +++K+G + +AT EL F Sbjct: 212 VLARPEGHGPGTKGLSMFIVPKFMPDPETGAPGARNGVYVTNVEHKMGLKVSATTELRFG 271 Query: 293 N---TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 G+L+GD++ +E ++++ +++ + A+ +AR R V Sbjct: 272 EKTPAVGWLVGDVHDGIAQMFQVIEHARMMV----GTKAIATLSTGYLNALEFARTR-VQ 326 Query: 346 GG------------ILIDQPVMKRAI-----------------ADIALDIAAATA----L 372 G +I P ++R + A +AAA + Sbjct: 327 GADLAATDKGAPRVTIIHHPDVRRMLMAQKAYAEGMRALVLYTASFQDTVAAAESEGGVP 386 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R A S + + A ++ PI K + + ++A +++ GGSGY+++ + + Sbjct: 387 GSRAALSGADGSAAERAARMNDLLLPIVKGVGSERSYELLASSLQIFGGSGYLQDYPVEQ 446 Query: 433 HYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 + R++ +++ G+ + D+ + ++G L L G +G + RD Sbjct: 447 YIRDAKIDTLYEGTTSIQGQDLFFRKIVRDQGQALTALLIDIQAFAKGDAGNGTLAKERD 506 Query: 490 SISLCKED-----KGLARFLTEKIALASSAAALYRAGMN 523 ++ ED L FLT + A + +Y+ G+N Sbjct: 507 QLAAALEDVQSMVGALVGFLT---SAAENRDEVYKVGLN 542 >gi|255941758|ref|XP_002561648.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586271|emb|CAP94019.1| Pc16g13490 [Penicillium chrysogenum Wisconsin 54-1255] Length = 436 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 35/301 (11%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYC 227 + + W PK+ T+ +G L+E G+D A+ ++ +K +DG Y Sbjct: 158 KAQRTWLPKL---------------TTGTVGSFCLSEPASGSDAFALQTKAEKTADG-YK 201 Query: 228 LSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 L+G K W +S + FI+ A ++ G + + + G + + K+G R+++T Sbjct: 202 LNGSKMWITNSMEAGVFIVFANIDPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIRASST 261 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA- 339 L F + ++ N+ + K I L+ + ++ LA A Y Sbjct: 262 CVLNFDDC---VIPKSNLLGEEGQGYKYAISVLNEGRIGIAAQMTGLALGAWENAARYVW 318 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G ++ + M+ IA +IAAA AL + A + + ++AA A++ Sbjct: 319 NDRRQFGELIGNFQGMQHQIAQAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL---- 374 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++A V + A+E +GG G++ E + +R+S +I G+ N + + LL+ Sbjct: 375 ---YASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQ 431 Query: 460 K 460 K Sbjct: 432 K 432 >gi|332667946|ref|YP_004450734.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] gi|332336760|gb|AEE53861.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] Length = 598 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 49/290 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D A ++ +DG Y +G K W ++ +D FI+ A+++G + F+V Sbjct: 151 LTEPGSGSDALAAKTRADLSADGKNYLFNGQKMWISNAGFADLFIVFAKIDGDKFTGFIV 210 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI-- 314 R GL + K+G + ++T ++ F NT PVE++ KI Sbjct: 211 ER-----DSAGLTLGAEEKKLGIKGSSTRQVFFENT-----------PVPVENVLGKIGK 254 Query: 315 --LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 LI ++ +S+ G + S+ AI YA R G + ++ +A+ A+ Sbjct: 255 GHLIAFNALNTGRFKLCALSLGGAKYSVTTAIRYANERIQFGVPISSFGAIQYKLAEQAI 314 Query: 365 DIAAATALSFRLAN--------------SFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 I + + FR++N SF EA+ ++ E YA I I K + Sbjct: 315 RIFSTESALFRVSNLMELKKQEFEANGASFGEAELKAAEE-YA-IECSILKVTGSEALDY 372 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V+ E ++ GG G+ EE + AR YR++ N I G+ L +++L K Sbjct: 373 VVDETLQVHGGMGFSEEGTAARAYRDARINRIYEGTNEINRLLSIDMLLK 422 >gi|289662786|ref|ZP_06484367.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 191 FVVPADAPGITYGRKEEKMGWNSQPTRGVTFENV---RIPAENLLGKEGEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|226355964|ref|YP_002785704.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226317954|gb|ACO45950.1| putative Acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 388 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256 LTE G+D A++ + ++ D + L+G K W S +D ++++A+ V CF Sbjct: 132 LTENSAGSDAASLRLRAERDGDS-WVLNGSKSWITSGGQADTYLVMARTGESGAKGVSCF 190 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 +V E+G+P GL + + + K+G ++ T + F G + N+ + + I L Sbjct: 191 IV----ENGTP-GLSFGKPEEKLGLHASHTTTVNFE---GVRVSQENMVGAEGQGLIIAL 242 Query: 316 IYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS A+ ++ R ++ A YA R G L + + IA +A I + Sbjct: 243 ASLDSGRIGIAMQALGIARAAMEHATRYANEREQFGKKLREFEGVSFKIARMAARIESTR 302 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ + A D+ + +EA+ A+++A T A V +A++ GG+GY E + Sbjct: 303 LIALKAAWLKDQGLAFGKEASIAKLLASET-------AVDVTRDAIQVFGGNGYSREYPV 355 Query: 431 ARHYRESPANSILLGS 446 R YR++ I G+ Sbjct: 356 ERLYRDAKVTEIYEGT 371 >gi|159043390|ref|YP_001532184.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911150|gb|ABV92583.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL 12] Length = 382 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 132/325 (40%), Gaps = 35/325 (10%) Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 I AR L A AGH + + + ++A + + K W PK+ S E Sbjct: 76 IEIARANLSA-WGAGHGIHSGIVAHYILAYGSEEQKQK-WLPKMVSGE------------ 121 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---- 250 + L +TE G+D+ I ++ K +G Y LSG K F+++ I++A Sbjct: 122 -MVGALAMTEPGAGSDLQGIKTRAVKDGNG-YRLSGSKIFITNGQHANLIVVAAKTDPSA 179 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 G G LV +LE G R +K+G ++ T EL F N LLG V G Sbjct: 180 GAKGVSLV--VLETEGAEGFSRGRNLHKVGMHASDTSELFFDNVAIPPENLLGG-EVGKG 236 Query: 308 PVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + M L L A +V M ++ + YA+ R GG ++ + +A+ Sbjct: 237 FYQMMTQLPQERLIIAAGAVGAMEGAVERTVAYAKERQAFGGPILQFQNTRFKLAECQTK 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A A E K E+AA A KYW VI E ++ GG GY+ Sbjct: 297 TTVARAFLNECMAEHLEGKLSVEKAAMA-------KYWITDTQGEVIDECVQLHGGYGYM 349 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E IA+ + ++ I G+ M Sbjct: 350 AEYDIAQMWSDARVQRIYGGTNEIM 374 >gi|118444538|ref|YP_878944.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(butyryl-CoA dehydrogenase) [Clostridium novyi NT] gi|118134994|gb|ABK62038.1| Acyl-CoA dehydrogenase, short-chain specific (SCAD)(Butyryl-CoA dehydrogenase) [Clostridium novyi NT] Length = 379 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F+++ ++D FI A + G + Sbjct: 123 FGLTEPNAGTDASGQQTVAVKQGDK-YILNGQKIFITNGGVADVFIAFAMTDKSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + G ++++K+G R+++T EL F D V P E++ Sbjct: 182 SAFIVEKGFKGFSIGKVEDKLGIRASSTTELIFE--------DCEV---PAENLIGKEGK 230 Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + VS + +A EAI Y + R G L M A+ Sbjct: 231 GFAIAMKTLDGGRIGVSAQALGIAEGALEEAIEYMKERKQFGKQLYKFQGMGWMAAECKA 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I AA L ++ A + K + EAA A++ A T A V +A++ GG GY Sbjct: 291 KIEAARYLVYKAAYNKMTGKPYTVEAATAKLFAADT-------AMEVATKAVQMFGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 344 TKDYPVERMFRDAKITEIYEGT 365 >gi|260549383|ref|ZP_05823602.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260407492|gb|EEX00966.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 378 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGD-YWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|171060266|ref|YP_001792615.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170777711|gb|ACB35850.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 593 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/333 (22%), Positives = 151/333 (45%), Gaps = 48/333 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 PK+ + E+ T + LTE + G+D++A+ S+ D Y +SG K F+ Sbjct: 151 PKMVAGEWTGT-------------MNLTEPQAGSDLSAVRSRAVPEGDH-YRVSGTKIFI 196 Query: 236 SSPMSD-----AFIMLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278 + D ++LA+ V+G + F+ P+ L +DGS N L +++K Sbjct: 197 TWGEHDLAENIVHLVLARLPEAPAGVKG-ISLFVCPKFLVNDDGSLGARNDLVCASIEHK 255 Query: 279 IGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVS 331 +G ++ T + F G+L+G+ + G + M ++ + L+ +S + + Sbjct: 256 LGIHASPTAVMSFGEGPGAIGYLVGEPHKGLGYMFTMMNHARLNVGLEGVGISERAYQHA 315 Query: 332 LAEAIHYARRRHVSGG-ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-- 388 A A+ + R ++G +I P ++R + D+ A AL++ A D A + ++ Sbjct: 316 RAYALDRVQGRTLTGSKTIIGHPDVRRMLLDMKARTEAMRALAYYAAGQMDRAHAHADAD 375 Query: 389 ----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A ++ P+ K WC + A + ++ ++ GG G++EE A++ R++ +I Sbjct: 376 ARARSQALVELLTPVVKGWCTENALGIASDGVQVHGGMGFVEETGAAQYLRDARITTIYE 435 Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475 G+ D++ L +G L + + D Sbjct: 436 GTTGIQANDLIGRKLAREGGVTMRALIAQMRSD 468 >gi|93006363|ref|YP_580800.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92394041|gb|ABE75316.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 383 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 29/291 (9%) Query: 175 APKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 AP I + KA P T ++G + +TE G+D+ AI + K D Y ++G Sbjct: 99 APYILKHGTEEQKKAWLPKLATGESVGAIAMTEPTTGSDLQAIKTYAVKDGDD-YIINGS 157 Query: 232 KWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 K F+++ I+LA + +G G L+ ++E + G R K G S T Sbjct: 158 KTFITNGQHTNLIVLACKTDRDQGAQGVSLI--VVETDALEGFSRGRNLKKTGLSSQDTS 215 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYL-----DSAIMSVSG---MRVSLAEAIHYA 339 EL FSN + NV G VE + + + + I+++SG ++++L + Y Sbjct: 216 ELFFSNV---RVPQKNV-LGGVEGLGFIQMMQELPQERLIIALSGCGAIKLALELTLEYV 271 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G + + +A++ D A AL D A A + Sbjct: 272 KEREAFGKSIWKFQNTRFKLAEVQADYLAVKALC-------DSAVEAMINGTLTAPQASL 324 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 KYW + V+ E ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 325 IKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIM 375 >gi|330873878|gb|EGH08027.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 600 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 78/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSD--AFI 244 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ A + Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIAHL 211 Query: 245 MLAQ-------VEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 +LA+ V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPSGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|313499664|gb|ADR61030.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 375 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G+ G F+VP SP G R+++K+G ++ T ++ F N + L Sbjct: 170 TDPEAGKRGISAFIVP----TDSP-GYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLG 224 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357 E KI L L+ + ++ V +A A YA R G LI+ + Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKALIEHQAVAF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A I+ A + A D + A + A + K + +MA V ++A++ Sbjct: 282 RLADMATKISVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+ + + R YR+ I G+ + Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|225628681|ref|ZP_03786715.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|254699511|ref|ZP_05161339.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|254706235|ref|ZP_05168063.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10] gi|254711472|ref|ZP_05173283.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|256029898|ref|ZP_05443512.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256158067|ref|ZP_05455985.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|256252978|ref|ZP_05458514.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|260167001|ref|ZP_05753812.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261220071|ref|ZP_05934352.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|261313676|ref|ZP_05952873.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261319081|ref|ZP_05958278.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|261749966|ref|ZP_05993675.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|261756388|ref|ZP_06000097.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265986915|ref|ZP_06099472.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|265996581|ref|ZP_06109138.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|306845537|ref|ZP_07478106.1| acyl-CoA dehydrogenase [Brucella sp. BO1] gi|225616527|gb|EEH13575.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|260918655|gb|EEX85308.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|261298304|gb|EEY01801.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|261302702|gb|EEY06199.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261736372|gb|EEY24368.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261739719|gb|EEY27645.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|262550878|gb|EEZ07039.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|264659112|gb|EEZ29373.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|306273858|gb|EFM55685.1| acyl-CoA dehydrogenase [Brucella sp. BO1] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|170702516|ref|ZP_02893395.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] gi|170132583|gb|EDT01032.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] Length = 395 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D + ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 LL +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C + Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|153004999|ref|YP_001379324.1| acyl-CoA dehydrogenase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028572|gb|ABS26340.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 382 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 121/266 (45%), Gaps = 21/266 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P+ A G GL+E + G+D A++ ++ + D ++ L G K W S ++ ++ A Sbjct: 112 PLASGEWAAGAFGLSEPQAGSDAASMRTRAVRRGD-VWVLDGEKQWITSGDVAGVIVVWA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300 + + G V L + GL R + K+G R+++TV L + G Sbjct: 171 KTDPEAGTRGVTAFLVERDAPGLVVGRHEEKMGIRASSTVSLALDGCEVPEAQRLGPEGE 230 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ ++ ++ I A + +R +L + YA+ RH G + + + +A Sbjct: 231 GFRIALAALDGGRVGI----AAQATGTIRAALDASRRYAKERHAFGRPIAEHQAVAFMLA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A D A+ ++ R A + + EAA A+++A + A ++ A++ G Sbjct: 287 DMATDHEASRLMTLRAAALKEAGAPFAREAAMAKLLA-------SEAAQRAVSRAVQIHG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY + S+ + +R++ ++ G+ Sbjct: 340 GYGYTSDYSVEKLFRDARVQTLYEGT 365 >gi|220917381|ref|YP_002492685.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955235|gb|ACL65619.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 380 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 36/278 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-----V 253 LTE G+D A + + + D Y L G K F+++ P +DA ++ A + + Sbjct: 123 FALTEPMSGSDAAEMRTVAVRRGD-EYVLDGTKNFITNGPQADAVLVFAMTDKAKRHKGI 181 Query: 254 GCFLVP---RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLN 303 FLVP R G P+ +K+G R++ + L F + G Sbjct: 182 SAFLVPTDARGFSRGKPD--------DKVGIRASGSCSLFFEGCAIPARHRLGEEGDGFK 233 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ G ++ +I I A ++ + EA+ YA+ R G + ++ +AD+A Sbjct: 234 IAMGTLDGGRIGI----AGQALGIAVAAFEEAVAYAKERKAFGQPITQFQAIQFMLADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA L R A++ D S E+A A++ A +M+ V ++A++ GG G Sbjct: 290 TEIDAARLLVLRAASAKDRGVRHSAESAMAKLFA-------SEMSERVTSKAIQIHGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 Y++E + RH+R+S I G+ L + + KG Sbjct: 343 YVKEFDVERHWRDSRITEIYEGTSEIQRLVISASVLKG 380 >gi|39935374|ref|NP_947650.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39649226|emb|CAE27746.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 375 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + + ++ D Y ++G K F++S + I+L V G+ G Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGQNGQLIILFAVTDPSAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R+++K+G S+ T +L F++ + DL + E + Sbjct: 179 ITAFIVPT-----DTPGYEVVRVEDKLGQHSSDTCQLAFNDMR--IPADLRLGA-EGEGL 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEAARDYARDRVTFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAA + A+ + EA+ A++ A T A AV + A++ +GG GY++ Sbjct: 291 AAARQMVLYAASLREAGLPCLTEASMAKLFASET-------AEAVCSSAIQTLGGYGYLK 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 344 DFPVERIYRDVRVCQIYEGTSD 365 >gi|90422551|ref|YP_530921.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90104565|gb|ABD86602.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 396 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D + S+ +K+ DG Y LSG K W + Sbjct: 118 FGNEATRQKYLPKLATGEWIGCFGLTEPDHGSDPGGMISRARKV-DGGYRLSGAKMWITN 176 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G P GL + K+G R++ T E+ + F Sbjct: 177 SPIADVFVVWAKDDAGEIRGF----VLEKGWP-GLSAPAIHGKVGLRASITGEIVLDDVF 231 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 232 CPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEDCYLRARQYVLDRKQFGR 285 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I RL DE + E + I K C Sbjct: 286 PLATNQLVQKKLADMLTEITLGLQGCLRLGRLKDEGAAPVE-------ITSIMKRNSCGK 338 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 339 ALEIARAARDMMGGNGISDEFGVARH 364 >gi|158315718|ref|YP_001508226.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158111123|gb|ABW13320.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 385 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 22/247 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259 LTE+ G+D A + + ++ D + ++G K F++ +P++D F++ A+ + G G + Sbjct: 122 LTEENAGSDPAGLATSARRDGD-EWVINGAKRFITNAPLADVFMVFARTDPGAEGGHGIT 180 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKIL 315 + + GL +K+G T ++ ++ + G+ V G M+ L Sbjct: 181 AFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL 240 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + + ++ + V LA E++ YA R GG++ +++ +AD A D+ AA Sbjct: 241 AH---GRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL +A FD+ RI KY+ + V A++ GG+GY+ + Sbjct: 298 ALVLDVAARFDDGSD-------TRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPV 350 Query: 431 ARHYRES 437 R YR++ Sbjct: 351 ERFYRDA 357 >gi|294664870|ref|ZP_06730189.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605362|gb|EFF48694.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|21242066|ref|NP_641648.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21107471|gb|AAM36184.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 21/274 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 191 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RVPAENLLGKEGEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 R+S + IL G+ M + V L G EQL Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNGE---EQL 392 >gi|260557138|ref|ZP_05829354.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter baumannii ATCC 19606] gi|260409244|gb|EEX02546.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter baumannii ATCC 19606] Length = 593 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 164/405 (40%), Gaps = 55/405 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365 I + + A YA + R +G IL+ V +R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSATGVQSPSKPADSILVHGDV-RRMLLNVRAN 356 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 521 >gi|87200121|ref|YP_497378.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135802|gb|ABD26544.1| acyl-CoA dehydrogenase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 600 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/339 (21%), Positives = 138/339 (40%), Gaps = 49/339 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P + + ++ A+ +P + P++ + E+ T + LTE GT Sbjct: 126 MYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLGT-------------MNLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ + DG Y ++G K F+S+ D ++LA+ G + F+V Sbjct: 173 DLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIV 232 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ + +DGS N + ++ K+G NAT + + G+++G+ N + M Sbjct: 233 PKFIVNDDGSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYA--RR--RHVSGGI--------LIDQPVMKRAIAD 361 L + ++ V+ + YA RR R ++G +I P ++R + D Sbjct: 293 NAARLGVGMQGLAQAEVAYQNGLAYALDRRQGRALTGPADPQAKADPIIVHPDVRRMLMD 352 Query: 362 IALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + AL A D + R E ++ P+ K + M V + Sbjct: 353 GKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYGTDMGYKVATDM 412 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + GG GYI E + + R++ I G+ +D+ Sbjct: 413 QQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDL 451 >gi|325919178|ref|ZP_08181233.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325550348|gb|EGD21147.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 597 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVTHRGETEQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454 >gi|240143298|ref|ZP_04741899.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82] gi|257204776|gb|EEV03061.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82] gi|291536834|emb|CBL09946.1| Acyl-CoA dehydrogenases [Roseburia intestinalis M50/1] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 27/261 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251 LTE GTD A +Q + + DG + L+G K F+++ ++D +I++A G Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R +++ G+P G + + K+G R ++T EL F + + N+ + Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236 Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 I ++ LD + ++ + +AE AI Y + R G + Q + +AD+A Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAAR 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L ++ A + K S EAA A++ A T A AV E ++ GG GYI Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGYGYI 349 Query: 426 EERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 350 REYDVERMMRDAKITEIYEGT 370 >gi|188586496|ref|YP_001918041.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351183|gb|ACB85453.1| butyryl-CoA dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 379 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ + + D Y ++G K F+++ +D +I+ A E G + Sbjct: 123 FGLTEPNAGSDAGSQETRAE-LKDDHYLINGTKIFITNGDEADTYIVFAMTEPDKGVKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + D G + + K+G + +AT EL F N + N+ + KI + Sbjct: 182 SAFIVDRDTPGFSVGKREKKMGIKGSATTELIFEN---MKVPKENLLGKEGQGFKIAMKT 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + V+ + +A E ++Y + R + ++ +AD++ + AA L Sbjct: 239 LDGGRIGVAAQALGIAQGALDETVNYTKEREQFNRPIAKFQGLQFEMADMSTQVEAARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + + K ++EAA A++ + ++A V +A++ GG GY ++ + R Sbjct: 299 VYRAAMAKAQGKPYTKEAAMAKL-------YASEVAMHVANKAIQLHGGYGYTKDYPVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MLRDAKITEIYEGT 365 >gi|23499979|ref|NP_699419.1| acyl-CoA dehydrogenase [Brucella suis 1330] gi|161620297|ref|YP_001594183.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|260568457|ref|ZP_05838926.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|23463561|gb|AAN33424.1| acyl-CoA dehydrogenase [Brucella suis 1330] gi|161337108|gb|ABX63412.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|260155122|gb|EEW90203.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|54025518|ref|YP_119760.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54017026|dbj|BAD58396.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 380 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + + G Y + G K W ++D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALACKATAVEGG-YRIDGTKAWITHGGVADFYTLFARTGEGSRGVSCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V D GL + + + K+G + T + N F L + + Sbjct: 186 V-----DKDTEGLSFGKPEEKMGLTAVPTTSAHYDNAF--LPAERRIGAEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V LA EA+ YA+ R G +ID + +AD+A + +A Sbjct: 239 LDSGRLGIAAVAVGLAQAALDEAVAYAQERTAFGRKIIDHQGLGFLLADMAAAVDSAR-- 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ GG GY + + R Sbjct: 297 ----ATYLDAARRRDAGLPYSR-QASVAKLVATDAAMKVTTDAVQVFGGYGYTRDFRVER 351 Query: 433 HYRESPANSILLGS 446 RE+ I G+ Sbjct: 352 FMREAKITQIFEGT 365 >gi|331017847|gb|EGH97903.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++G+ + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRGRSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|229491809|ref|ZP_04385630.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229321490|gb|EEN87290.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 385 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-------QVEG 251 + +TE G+D+A I + + DG Y L+G K F++ + ++A + + Sbjct: 124 IAMTEPGTGSDLAGIKTTARLSEDGTHYILNGAKTFITGARNSELCVVAARTSAPSEEDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L L+ G + R +KIG +S+ T EL F+ D+ V PVE+ Sbjct: 184 RFGLSL---LVVPTDSVGFNFGRKLDKIGMKSSDTNELSFT--------DVRV---PVEN 229 Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + K YL + + ++ A Y R+R V G + K Sbjct: 230 LLGEQDKGFSYLGQNLPRERLSIGVGQTACAAAAIEFASEYVRQRQVFGKPVASFQNTKF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A+ A ++AAA AL+ + + D + + +AA RI K +C +MA VI + ++ Sbjct: 290 VLAECATEVAAAQALADKGLDLDDSGELTAADAA--RI-----KLFCTEMAGRVIDKCLQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GYI E IAR Y ++ + I G+ M Sbjct: 343 LHGGYGYILEYPIARLYADTRVSRIYGGTSEVM 375 >gi|195353562|ref|XP_002043273.1| GM26869 [Drosophila sechellia] gi|194127387|gb|EDW49430.1| GM26869 [Drosophila sechellia] Length = 405 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 118/258 (45%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VG 254 L+E G+D A ++ D W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDHFVVNGTKAWITNAFEAEAAIVFATTNKQLKHKGIS 204 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+VP+ + G + ++K+G R ++T +L F + ++ N+ P KI Sbjct: 205 AFIVPK-----ATKGFSLGKKEDKLGIRGSSTCQLIFEDC---VVPKENMLGEPGFGFKI 256 Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD+ + ++ + + +A + YA++R G + +++ IAD++L + + Sbjct: 257 AMQTLDAGRIGIASQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMES 316 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++R A D+ + ++EAA A++ A C + ++ +GG GY+ + Sbjct: 317 ARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQILGGMGYVTDM 369 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 370 AAERHYRDARITEIYEGT 387 >gi|156324146|ref|XP_001618465.1| hypothetical protein NEMVEDRAFT_v1g154495 [Nematostella vectensis] gi|156199014|gb|EDO26365.1| predicted protein [Nematostella vectensis] Length = 269 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + K D Y ++G K F+++ + +D +++ A+ + +G + Sbjct: 4 LCITEPFGGSDVAGMRTTAIKKGDK-YIINGSKTFITNGVYADYYVVAAKTDPELGNKGI 62 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 L D S G+ +L +K+G R++ T E+ F N + L+G+ + L Sbjct: 63 SIFLMDSSSKGVSATKL-DKLGWRASDTAEIAFDNVEISQENLMGEEGKGFPYIMQHFAL 121 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L AI + + ++ I Y +R G + ++ I + A D+ ++ Sbjct: 122 ERLIMAINAHARAEYAIEYTIEYMSQREAFGKTINKFQALRHTIVEHATDVEHCKLFNYA 181 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 D+ + +EA A++ + K+A I ++ +GG GY+EE +AR R Sbjct: 182 AVARLDKGEYVVKEATMAKLKS-------TKVADETIYSCLQMLGGYGYMEEYPLARLLR 234 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 235 DSRLGPI--GGGTSEIL 249 >gi|108756791|ref|YP_631977.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108460671|gb|ABF85856.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 381 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 27/263 (10%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--G 251 ++A L+E G+D A+ + + D ++ L+G K W S + ++ A+ G Sbjct: 118 AIAGSFALSEPHAGSDPGALRTTAVRRGD-VWVLNGSKQWITSGAYAGVMVVWARTSPAG 176 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G CF+V +G GL + ++K+G RS+ TV L F + + N+ Sbjct: 177 NKGLSCFIV-----EGGTKGLIIGKHEDKMGLRSSNTVSLTFEDC---EVPAENLLGAEG 228 Query: 310 EDMKI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + K+ ++ LD + ++ R +L + Y + R G + + + +AD+ Sbjct: 229 QGFKLAMVALDGGRIGIAAQACGVGRAALEATVAYVKDRQAFGQPIGEFQGPRFMLADMQ 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L+ R A+ ++ + S EA+ A++ A +M+ V +A++ GG G Sbjct: 289 TQLEAAELLTLRAASMKEKGQPFSREASMAKLFA-------SEMSNKVADKAVQLHGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI+E + R +R++ +I G+ Sbjct: 342 YIDEFPVERFFRDARVQTIYEGT 364 >gi|119714538|ref|YP_921503.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119535199|gb|ABL79816.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 381 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 37/336 (11%) Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 D F V+ ++ +K+ AA L + + +T+ +V L T + + W P + + Sbjct: 67 DYRFNAVLLEELNKVNAA-------LGSCVGIHADITAPYLVELGTDEQKQR-WLPGVAA 118 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 E V + +G+TE GG+D+AA+ + K D + ++G K F+++ S Sbjct: 119 GE-------------VLLAIGMTEPSGGSDLAALKTTAVKDGDS-WVINGSKTFITNGYS 164 Query: 241 -DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296 D ++ A+ + + + G R +KIG + T EL F N T Sbjct: 165 ADLVLVAARTSPEKKARGITLFAVESTAPGYSRGRKLDKIGQDESDTAELFFENVRVTDA 224 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 ++G+L+ G + M+ L L AI +V+ + L E + YA+ R G + Sbjct: 225 EIVGELD--GGFIHMMQKLPQERLGCAISNVAHAKQILLETLQYAKDRKAFGQGIGSFQY 282 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 K +A++ I A D+ I A K+W ++ V+ Sbjct: 283 NKFLLAELFTRIEVTEAF-------IDQCVVAHAAGELTPIDAAKAKWWSSQVQNEVLDH 335 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E +AR +R++ + I GS M Sbjct: 336 CVQLHGGYGYMNEYRVARAWRDARVSKIWAGSNEIM 371 >gi|312221598|emb|CBY01538.1| similar to acyl-CoA dehydrogenase [Leptosphaeria maculans] Length = 438 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 31/261 (11%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH- 231 W P +F+ E TS A LG+TE GG+D+A I + K DG Y ++G+ Sbjct: 151 WLPGLFTWE-----------TSFA--LGITEPSGGSDVANIETTATKSPDGTHYIVNGYK 197 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-VELE 290 KW P + + A G G + L+ S GL ++R+ N N A+ VEL+ Sbjct: 198 KWITGMPWA-THMTTAVRTGGPGMTGISVLVIPTSSRGLTHRRIANSGQNSGGASFVELD 256 Query: 291 -FSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVS---GMRVSLAEAIHYARRRH 343 G LLG+ N + +I++ + +MS+ R L+E+ YA RH Sbjct: 257 NVQVPVGNLLGEEN------KGFRIIMKNFNKERFLMSIGCNRKARTCLSESTAYAHTRH 310 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G L+ ++ +A +A I + A +LA +++ ++A A +A +TK Sbjct: 311 TFGKPLVSNQIIAHKLATMARYIESHWAWLEQLAYHIQQSRDGWQDAEIAGQIA-LTKVH 369 Query: 404 CCKMAPAVIAEAMECIGGSGY 424 ++ EA + GG+GY Sbjct: 370 GGRILEMANREAQQIFGGAGY 390 >gi|300790236|ref|YP_003770527.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299799750|gb|ADJ50125.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 378 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 28/255 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E + G+D AA++++ ++ Y ++G K W + ++D + + R G + Sbjct: 127 LSETQAGSDAAALSTRA-RLDGPDYVVNGTKAWITHAGVADFYTTMV----RTGPDEISC 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316 LL DG+ GL + K+G + T ++ F N LLG P ++I L Sbjct: 182 LLVDGATEGLSAAPRERKMGLTGSPTAQMIFENARVPAERLLG------APGAGLRIALS 235 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L S + ++ V LA EA+ YA+ R G +ID ++ +AD+A + A+ A Sbjct: 236 SLSSGRLGIAACAVGLAQAALDEAVAYAKGRSQFGRPIIDFQGVEFLLADMAATVEASRA 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L D A+ R + R A I K A V +A++ +GG+GY + + Sbjct: 296 L------YLDAARRRDRGMPFNR-QASIAKLVATDGAMKVTTDAVQVLGGAGYTRDFPVE 348 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 349 RYMREAKVPQIFEGT 363 >gi|218515203|ref|ZP_03512043.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli 8C-3] Length = 395 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++ ++ +K+ DG Y L+G K W ++P++D F++ A+ E G + F Sbjct: 138 FGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGF- 195 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +LE G GL + K+G R++ T E+ F + + N+ G Sbjct: 196 ---ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTC 248 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+SA ++ + AE A Y R G L ++++ +AD+A +I+ Sbjct: 249 LNSARFGIAWGALGAAEDCYARARQYTLERKQFGRSLAANQLIQKKLADMAAEISLGLQG 308 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 RL +E E + I K C A + A + +GG+G +E IAR Sbjct: 309 CLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361 Query: 433 H 433 H Sbjct: 362 H 362 >gi|166712845|ref|ZP_02244052.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 191 FAVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|126666886|ref|ZP_01737862.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] gi|126628602|gb|EAZ99223.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] Length = 448 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/315 (21%), Positives = 133/315 (42%), Gaps = 38/315 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE G+ +A I + + G Y + G K ++S + ++LA+++G Sbjct: 10 MALTEPHAGSSLADIRTSATPDNAGHYLIKGAKIYISGGEQNITENIVHMVLAKIKGAPA 69 Query: 253 ----VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+VP+L G NG+ L +K+G R + L F + G+L+G Sbjct: 70 GVKGISLFIVPKLRLSETGGSGERNGVALAGLIHKLGYRGTTSTALSFGDDAECHGYLVG 129 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR-RRHVSGGILIDQ-PV 354 + L + + ++ + +A++ G SLA A + RR +Q P+ Sbjct: 130 EPHQGLKYMFQMMNEARVGVGCGAAVIGYRGYMHSLAYAKDRLQGRRAADNNPQSEQVPI 189 Query: 355 M-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 + ++A ++ L + A N+ E + R E ++ P+ K W Sbjct: 190 IEHADVRRMLLAQKAYSEGGLALCLYGARLMDDQNTHPEPQKRQEAGQLLDLLTPVIKAW 249 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKG 461 + P A++ GG+GY E + + +R++ N I G+ LD+L + + Sbjct: 250 PSEYGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLLGRKVWQNQ 309 Query: 462 TNLFEQLFSTLEQDL 476 ++ + L ++ DL Sbjct: 310 SHGLQLLLDAMQADL 324 >gi|167621911|ref|YP_001676696.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167351652|gb|ABZ74382.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 590 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 46/313 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + +G + L+G K F++S D ++LA++ G Sbjct: 163 LTESHAGTDLGLIRTRAEPDGEGAFRLTGGKIFITSGEHDLVENIVHLVLARLPGAPAGV 222 Query: 253 --VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ + P+G +R +++K+G +++AT + F G L+G + Sbjct: 223 KGISLFVVPKFIP--RPDGALGERNAVTCGAIEHKMGLKASATCAMNFDGAVGRLVGQPH 280 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR------------HVSGGI 348 ++ M ++ + ++S G V+ A YAR R Sbjct: 281 RG---LQAMFTMMNAERLLLSAQGQGVAETAYQSAAAYARDRLQGRAPGDHGEASAHADP 337 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKY 402 +I P ++R + + AL + + D A +R+ A +M PI K Sbjct: 338 IIVHPDVRRMLLTMRAHAEGGRALGLWVMRALDVAARDPDPDARASANALVALMTPIVKV 397 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460 W A ++ +GG G+I E + + R++ + G+ LD++ L + Sbjct: 398 WLSDTASETANLGIQVMGGHGFIREWGMEQLVRDARILQLYEGANGIQALDLVARKLPME 457 Query: 461 GTNLFEQLFSTLE 473 L ++L + +E Sbjct: 458 NGRLLDRLTAPIE 470 >gi|120401921|ref|YP_951750.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954739|gb|ABM11744.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 380 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 30/264 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + ++E G+D+A I + + D + L+G K F+S+ + SD I++A+ + G G Sbjct: 124 IAMSEPGAGSDLAGIRTTAVRAGDD-WILNGSKTFISAGINSDLVIVVARTDPDAGHKGF 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VST 306 L+ ++E G P G R +K+G + T EL F++ LLG+ N ++ Sbjct: 183 SLL--VVERGMP-GFERGRKLDKMGQPAQDTAELHFTDVRVPATNLLGEQNRGFYHLMAN 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 P E + I AI +V+G R + + + YA+ R G + + +A++ ++ Sbjct: 240 LPSERLSI------AIAAVAGARETYRQTLQYAKDRTAFGQSIGSFQHNRFVLAELDTEL 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A R + + + +AA A K+WC ++A V+ ++ GG GY+ Sbjct: 294 DIAEQYVDRCLQALLDQDFSAVDAAKA-------KWWCTELAKRVVDACLQLHGGYGYMN 346 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 E +A+ Y ++ +I G+ M Sbjct: 347 EYKVAKDYVDTRIQTIYGGTTEIM 370 >gi|83644527|ref|YP_432962.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83632570|gb|ABC28537.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 599 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + ++ + + DG Y ++G K F+S+ D ++LA++ Sbjct: 164 LTEPHCGSDLGLLKTKAEPLPDGAYAITGTKIFISAGDHDLSDNIVHVVLARLPDAPAGT 223 Query: 253 --VGCFLVPRL-LEDG----SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + DG +PN L L++K+G + +AT + F G+L+G+ N Sbjct: 224 KGISLFIVPKFNVSDGGEITTPNSLSCGSLEHKMGIKGSATCVMNFDGARGYLIGEPNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353 + + + ++ + AI YAR R + G + D+P Sbjct: 284 LNCMFTFMNAARVGVGLEGLAATEAAFQGAISYARDRLQMRSLKGPVNKDKPADPIIVHP 343 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + ++AI + +A L ++A ++ A ++ PI K + + Sbjct: 344 DVRRMLLTQKAIREGGRALAMYCTQQIDLTLYSEDADVKAAAEAKLALLTPIVKAFLTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A + M+ GG G+I+E + + R++ ++ G+ +D+L Sbjct: 404 AQECASYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLL 451 >gi|45658958|ref|YP_003044.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602203|gb|AAS71681.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 595 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 72/369 (19%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W P+I + +Y + + LTE G+D+ + ++ + ++GI+ ++G Sbjct: 179 EKWIPEISAGKY-------------SAAMALTEPNYGSDLPNVQTRATQDANGIWRINGA 225 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLK----------N 277 K F++ +I V + L GSP GL + +K + Sbjct: 226 KRFITHAC--GYINAPSV--------ILTLARTGSPESGARGLSFFLVKGSDVHIAGVEH 275 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G + T E+ F N+ G L+G TG + +++A ++++ + +A A + Sbjct: 276 KLGLHCSPTCEVVFDNSPGELIG----KTGYGLVKYSMGMMNAARLTIATQSLGIATAAY 331 Query: 338 YARRRHVSGGILIDQPVMK----RAIAD-IALDIAAATALSFRLANSFD----------- 381 Y +++ S I +P+ + R I D + +I A L + D Sbjct: 332 YEAKKYASERIQFGKPIEQIPAVRKILDRMEREILATRVLIAETGKAIDLYHWPKEHLIK 391 Query: 382 -EAKSRSEE---------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 E KS E A + P++KY+ + A+ ++A++ GGSGY E+ +A Sbjct: 392 IEGKSEKEVNQNESIRRWEKLADLFTPLSKYYASEGCVAIASDALQIHGGSGYTEDYDVA 451 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSG-----KKVITI 486 R YR+S +I G+ ++ + + G + QL E +L KKV Sbjct: 452 RIYRDSRITTIYEGTTQLQIVAAIGGVVSGMSPTGQLRQYSEMELSKFSASEDLKKVWKD 511 Query: 487 LRDSISLCK 495 L SI L K Sbjct: 512 LDTSIGLYK 520 >gi|319764065|ref|YP_004128002.1| isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC] gi|330823660|ref|YP_004386963.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317118626|gb|ADV01115.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC] gi|329309032|gb|AEB83447.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 390 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 32/264 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G+GLTE GTD+ AI + ++ D Y ++G K W +S + +L + + + Sbjct: 127 GVGLTEPDAGTDLQAIRTVARREGDH-YVVNGSKMWITNSMYGNCLALLVKTDPKA---- 181 Query: 258 VPR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGD-LNV 304 PR LL G + K+G + T L F N G + G L Sbjct: 182 EPRHKGMSLLIAEKGEGFIVSKKLEKLGYKGIDTCALSFENYRVPADRLVGGVEGKGLQQ 241 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G +E L ++ A + + +L EA+ YA+ R G + + ++ + ++A Sbjct: 242 VLGGLE----LGRINVAARGLGIAQAALEEAVAYAQVRKTFGKPIAEHQAIQLKLGEMAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA L + A +FD + EA A KY+ + EAM GG GY Sbjct: 298 RTQAARLLVYAAAEAFDRGERCDMEAGMA-------KYFATEAGQENALEAMRIFGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGN 448 +E ++ R YR++P +L+G G Sbjct: 351 SKEYNVERLYRDAPL--LLIGEGT 372 >gi|295395834|ref|ZP_06806022.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] gi|294971369|gb|EFG47256.1| acyl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] Length = 381 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 20/261 (7%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257 GL+E+ G+D A + ++ + DG + L+G K W ++ +S+ + ++A + G+ G + Sbjct: 124 GLSEREAGSDTAGMKTRAVRDGDG-WVLNGVKTWITNAGVSEFYTVMAVTDPDGKRGNNI 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 ++E G G + + K+G + + T EL F + + + D + +KI L Sbjct: 183 TAFVVEKGD-EGFSFGEKERKLGIKGSPTRELFFEDCW---IPDSRRVGEEGQGLKIALK 238 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD ++++ V +A+ AI Y + R G + D ++ +AD+A + AA Sbjct: 239 TLDHTRVTIAAQAVGVAQGALDYAIDYVKERKQFGKRIADFQAIQFMVADMATKLEAARQ 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++ A AKS + + K + +A + +A++ +GG+GY+ + + Sbjct: 299 LTYAAA-----AKSERNDDDLS-FFGAAAKAYASDVAMEITTDAVQLLGGAGYVVDHPVE 352 Query: 432 RHYRESPANSILLGSGNAMVL 452 R R++ I G+ L Sbjct: 353 RMMRDAKITQIYEGTNQVQRL 373 >gi|212639345|ref|YP_002315865.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212560825|gb|ACJ33880.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 380 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/313 (22%), Positives = 118/313 (37%), Gaps = 63/313 (20%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T K W PK S E + + +TE G+D+A I + K Sbjct: 97 IASYGTEEQKKKWLPKCVSGE-------------LITAIAMTEPGAGSDLAGIQTTAVKQ 143 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR----------LLEDGSPNGLC 271 D Y ++G K F+++ + +++ C P L+ + G Sbjct: 144 GDH-YIVNGQKTFITNGIHADLVLVV-------CKTNPSANPPHKGISLLVVERETTGFT 195 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDS------ 320 R K+G + T EL FS+ + PVE++ K YL Sbjct: 196 RGRKLEKVGLHAQDTAELFFSD-----------AKVPVENLLGEEGKGFYYLMEKLQQER 244 Query: 321 ---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 AI + + V Y + R G + ++ +A++A +IA A Sbjct: 245 LIVAIAAQTAAEVMFDLTKRYVKDRTAFGKTISQFQTVQFRLAEMATEIALGRAF----- 299 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + K+W +MA + +E M+ GG GY+EE IAR YR+ Sbjct: 300 --LDDVIEQHIAGKDVVANVSMAKWWMTEMAKRIASEGMQLHGGYGYMEEYEIARRYRDI 357 Query: 438 PANSILLGSGNAM 450 P ++I G+ M Sbjct: 358 PVSAIYAGTNEVM 370 >gi|111024923|ref|YP_707343.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|40787236|gb|AAR90153.1| putative acyl-CoA dehydrogenase [Rhodococcus sp. DK17] gi|110823902|gb|ABG99185.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 29/298 (9%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + +TT W P + S E V +G+TE GG+D+AA+ + Sbjct: 97 APYLVQLTTDEQKVRWLPGVCSGE-------------VLTAIGMTEPAGGSDLAALKTTA 143 Query: 219 QKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 + DG + LSG K F+++ S D ++ A+ + + S G R + Sbjct: 144 VRDGDG-WLLSGAKTFITNGYSADLVVIAARTSPEKKAKGITLFGVETSLPGFERGRKLD 202 Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332 K+G T EL N T ++G+L+ G + M L L A+ +++ L Sbjct: 203 KVGQDEADTAELFLDNVRVTDAHVIGELD--RGFIHMMSFLPQERLGCAVSNLAHAAQIL 260 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 E + Y R R G + K IAD+ I A + + + S +AA Sbjct: 261 VETVDYCRERTAFGQSIGTFQHNKFLIADLVTQIEVTQAYVDQCVAAHAAGELTSVDAAK 320 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W + VI ++ GG GY+ E +AR +R++ + I GS M Sbjct: 321 A-------KWWTADVQNRVIDHCVQLHGGYGYMNEYRVARAWRDARVSRIWAGSNEIM 371 >gi|296270123|ref|YP_003652755.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296092910|gb|ADG88862.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 383 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/318 (24%), Positives = 131/318 (41%), Gaps = 61/318 (19%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + W P M + + GLTE GG+D+ + +G + Sbjct: 101 TPEQKRRWLPG-------------MARGEILGAFGLTEPGGGSDVPGAMRTTAVLENGEW 147 Query: 227 CLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKN 277 ++G K F+++ +D I +A V GR + LVP G+P GL + + Sbjct: 148 VINGTKAFITNSGTDITGVIAVAAVTGRREDGRPEISTILVP----AGTP-GLTVSKKYS 202 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGM 328 K+G ++ T EL F+ D V P E++ + L LD ++++ + Sbjct: 203 KVGWSASDTRELSFT--------DCRV---PEENLLGVRGRGYAQFLQTLDEGRIAIAAL 251 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 V LA E+I YA+ R G L ++ IAD+ + A + A Sbjct: 252 SVGLAQGCVDESIKYAKERTAFGRELARHQAIQFKIADMEARVHTARLAYYHAAERMLAG 311 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + +EAA A+++A A +A + GG G++ E + R YR+ A + Sbjct: 312 EPFKKEAAIAKLVA-------SNAAMDNARDATQIFGGYGFMNEYPVGRFYRD--AKILE 362 Query: 444 LGSGNAMVLDVLNLLEKG 461 +G G + + +L E G Sbjct: 363 IGEGTSEIQRMLIARELG 380 >gi|296164098|ref|ZP_06846717.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900538|gb|EFG79925.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 399 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 15/242 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE G+D+A + ++ + D Y ++G K F++S + F+ A G G V Sbjct: 144 LAVTEPGAGSDVANLRTRAVRDGD-TYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVS 202 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 L+ D G R +K+G R + T EL F + + G ++I+ Sbjct: 203 LLVIDKGTPGFKVDRRLDKMGWRCSDTAELSFFDVRVPAANLVGAENGGF--LQIMQQFQ 260 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 S + ++ + AE A +AR R G L + V++ +A++A + A A + Sbjct: 261 SERLGIAVQAYATAERALKLAKGWARERQTFGKPLTARQVIRHKLAEMARQVDVARAYTR 320 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + E + MA T + C V+ EA++ GG GY+ E + RHY Sbjct: 321 AVMQRWLAGEDVVTEVS----MAKNTAVYACDY---VVNEAVQIFGGMGYMRESEVERHY 373 Query: 435 RE 436 R+ Sbjct: 374 RD 375 >gi|238026553|ref|YP_002910784.1| acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1] gi|237875747|gb|ACR28080.1| Acyl-CoA dehydrogenase-like protein [Burkholderia glumae BGR1] Length = 596 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 61/337 (18%) Query: 152 MSPSVTSASMVALMTTPRVHKD--WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + PK+ S E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDAQKARYVPKLVSGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + DG Y + G K F++ M+D + +LA+ G + F+V Sbjct: 171 DLALVRARAEPQGDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPGAPEGVKGISLFIV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 P+ L EDGS N + +++K+G +++ T L++ + G L+G+ + +E Sbjct: 231 PKFLVNEDGSLGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGHLVGEEHRG---LE 287 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMK 356 M I +++A V + +AE A +A+ R S + +I P ++ Sbjct: 288 YM--FIMMNAARFGVGMQGIGVAERAYQKAAAFAKERVQSRPVDGSAKQSVTIIHHPDVR 345 Query: 357 RAIADI-------ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 R + + A A S DEA+ + +A Y + P+ K W +M Sbjct: 346 RMLGTMRALTEGARALAYVAAAHSDHAHAHPDEAERKRHQAIY-EYLVPVVKGWSTEMVN 404 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 405 EVASLGVQIHGGMGFIEETGAAQYYRDARILAIYEGT 441 >gi|171320424|ref|ZP_02909459.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171094342|gb|EDT39414.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 395 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D + ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 LL +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C + Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|112253528|gb|ABI14351.1| acyl-CoA dehydrogenase protein 1 [Pfiesteria piscicida] Length = 430 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 26/268 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVP 259 L+E G+D A+ + ++ D + + G+K W +S + F++ A + + + Sbjct: 173 LSEPGSGSDAFALKTAARQDGDD-WIIDGNKCWISNSKEAGLFVVFANADFSKKHRGITA 231 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 ++E +P G+ + ++K+G R+++T EL F N +LG+L E K+ I Sbjct: 232 FVVEKDNP-GMTIGKKEDKLGIRASSTCELNFDNCRVHKSAMLGELG------EGYKMAI 284 Query: 317 -YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + + V LA A+ Y R R G + D M+ A A++I AA Sbjct: 285 GLLNEGRIGIGAQMVGLARGAFDYALEYMRTRKQFGTAVSDFQGMQFQYARAAMEIEAAR 344 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + A + + EAA A++ A ++A V ++A++ +GG G+ +E Sbjct: 345 VLVYNAARMKEAGQPFVTEAAMAKLKAS-------EVAQMVSSQAIDWLGGVGFTKEFIA 397 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLL 458 ++YR+S +I G+ N +L + L Sbjct: 398 EKYYRDSKIGTIYEGTSNIQLLTIAKAL 425 >gi|331696949|ref|YP_004333188.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326951638|gb|AEA25335.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 413 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 25/278 (8%) Query: 184 DPTNKAPMQKTSVA---IG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 DP + + + S + IG + L+E G+D+AA++++ ++ D Y L+G K ++ + Sbjct: 127 DPARRGELLRRSASGEWIGAIALSEPDAGSDLAAVSTRAERDGD-EYVLTGRKRWIGNAK 185 Query: 240 SDAFIMLAQVEGRVG------CFLVPRLLE---DGSPNGLCYQRLKNKIGNRSNATVELE 290 + FI + G L L+E D P GL + +KIG T ELE Sbjct: 186 AADFIQVLVRTADPGPGEKRSAGLATLLVEKERDAFPKGLTGSPI-DKIGYHGFVTWELE 244 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 F + + D G E + L + +A +V R ++ + I Y ++R G Sbjct: 245 F-DGLRVPVADEITEGGFAETQRWLTIARVHTAARAVGLARAAVEDCIGYLQQRRQFGHP 303 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 + D ++ +A +A + A A +A+ D E+A +++A +MA Sbjct: 304 IGDFQAVRFTLARMAARVDQARAFYQHVAHQIDLGVPCERESAMVKLLA-------TEMA 356 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V + ++ GG+GY E + RH+R++ +I G+ Sbjct: 357 AEVTGDGIQLHGGNGYTTEHQVERHWRDARLTTIFEGT 394 >gi|301053873|ref|YP_003792084.1| acyl-CoA dehydrogenase [Bacillus anthracis CI] gi|300376042|gb|ADK04946.1| acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI] Length = 569 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLTFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|299771990|ref|YP_003734016.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298702078|gb|ADI92643.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 375 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AA+ ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAAALKTRAVKDGDD-YILNGAKQFITSGDNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|256015006|ref|YP_003105015.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] gi|255997666|gb|ACU49353.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] Length = 384 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|222081823|ref|YP_002541188.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] gi|221726502|gb|ACM29591.1| glutaryl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] Length = 393 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 114 FGSEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMATRAKKV-DGGYSLTGAKTWISN 172 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +P++D F++ + E G + F +LE G GL + K+G R++ T E+ N F Sbjct: 173 APIADVFVVWGKTEDGVIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEVVMENVF 227 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 LL +++ GP L+SA ++ + AE A Y R G Sbjct: 228 VPEENLLPNVSGLKGP------FTCLNSARFGIAWGALGAAEDCYAKARQYVLDRQQFGR 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I RL ++ E + I K C Sbjct: 282 PLAANQLIQKKLADMVTEITLGLQGCLRLGRMKEDGHPPVE-------LTSILKRNSCGK 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E IARH Sbjct: 335 ALDIARAARDMLGGNGISDEFGIARH 360 >gi|50550801|ref|XP_502873.1| YALI0D15708p [Yarrowia lipolytica] gi|49648741|emb|CAG81061.1| YALI0D15708p [Yarrowia lipolytica] Length = 421 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 35/322 (10%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + PSV+ + V + W +Y P A QK L+E G+D Sbjct: 119 VDPSVSVMNDVHNTLVNTCIRSWGSDALRNKYLPQLAA--QKVG---SFALSEPSSGSDA 173 Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDG 265 A+ S+ K DG Y L+G K W ++ ++ FI+ A ++ G F+V + + Sbjct: 174 FAMKSRATKTDDG-YILNGSKMWITNAAEAELFIVFANLDPSKGYKGITAFVVEKDM--- 229 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMS 324 G+ + + K+G R+++T L F + F + N+ + KI I L+ + Sbjct: 230 ---GVQIAKKEQKLGIRASSTCVLNFEDVF---IPKENLLGEEGKGYKIAIECLNEGRIG 283 Query: 325 VSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++ + LA +A YA R G + + M+ I A +I AA L + A Sbjct: 284 IAAQMLGLAGGAFKKATGYAFNDRKQFGQYIGEFQGMQHQIGQAATEIEAARLLVYNAAR 343 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + ++EAA A++ + ++A V ++A+E +GG G+ E ++ + +R+S Sbjct: 344 LKEAGVPFTKEAAMAKL-------YASQVAGNVASKAVEWMGGVGFTREETLEKFFRDSK 396 Query: 439 ANSILLGSGNAMVLDVLNLLEK 460 +I G+ N + + +++K Sbjct: 397 IGAIYEGTSNIQLQTIAKIIQK 418 >gi|108797222|ref|YP_637419.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119866307|ref|YP_936259.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108767641|gb|ABG06363.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119692396|gb|ABL89469.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 611 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 48/371 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIEGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR-IMAPI 399 + P ++R++ AL A D A ++ SE A +M PI Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457 K + A A + E+++ GGSG++++ I ++ R++ +S+ G+ D + Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462 Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514 + + +EQ + S SG + R ++ ED + +A LT + A + Sbjct: 463 VRDKGQALAYVAGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENP 522 Query: 515 AALYRAGMNDI 525 A LY+ G+ + Sbjct: 523 AELYKVGLGSV 533 >gi|92116392|ref|YP_576121.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14] gi|91799286|gb|ABE61661.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 594 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 107/486 (22%), Positives = 200/486 (41%), Gaps = 74/486 (15%) Query: 62 GEYVLSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGL 115 G+Y TA L + T L G++ +V P W A RR G Sbjct: 30 GDYDADITAAVLEEAGRFATEVLTPLDRTGDQHGARLQDGRVTTAPGWAAAYRRWTAAGW 89 Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKD 173 + F A ++ + + G + P +T +++ AL + + K Sbjct: 90 NAVSGPEDFGGQGLPLAINAACTEIWSASNIAFG--LCPLLTLSAIEALTAHGSDALKKI 147 Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + K+ S E+ T MQ LTE + G+D+ ++ S+ ++ +DG Y + G K Sbjct: 148 YLEKLVSGEWSGT----MQ---------LTEPQAGSDVGSLRSRAERAADGSYRIVGTKI 194 Query: 234 FLS---SPMSDAFI--MLAQV----EGRVGC--FLVPRLLED-----GSPNGLCYQRLKN 277 F++ M+D + +LA++ G G FL+ + L + G+ N + +++ Sbjct: 195 FITYGDHDMTDNIVHFVLARLPDAPAGTKGTSLFLISKFLVNADGSLGARNDIHASGIEH 254 Query: 278 KIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 K+G ++ T + + G+L+G+ N + M L + V + Sbjct: 255 KLGIHASPTCTMTMGDEGGAVGYLIGEENRGMQCMFTMMNQARLGVGLEGVGVAERAYQR 314 Query: 335 AIHYARRRHVSGGI---------LIDQPVMKR------AIADIALDIAAATALSFRLANS 379 A+ YA+ R + +I P +KR A+ A I ATA++ +A Sbjct: 315 ALAYAQERKQGRAVGKSGDGMDAIIVHPDVKRMLMQMRALTAAARTICYATAVALDVAAR 374 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + R+ AA ++ P+ K + + V + ++ GG G+IEE A+HYR++ Sbjct: 375 ATDPDVRAAAAARGALLTPVAKAFSTDIGNEVASLGVQVHGGMGFIEETGAAQHYRDARI 434 Query: 440 NSILLGSGNAMVLDVLNLLEKGTN------LFEQLFSTLEQ-------DLGSSGKKVITI 486 SI G+ +D++ G L ++L +T+++ G++G K Sbjct: 435 TSIYEGTNGIQSIDLVTRKLGGDGGAAVWALLDELSATVKRVEASNDPAFGATGTK---- 490 Query: 487 LRDSIS 492 LRD++ Sbjct: 491 LRDALG 496 >gi|254474141|ref|ZP_05087533.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] gi|211956837|gb|EEA92045.1| long-chain specific acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] Length = 390 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + ++ +G Y L+G K F++S M + +A G G + Sbjct: 136 LAITEPGGGSDVQNLKTVARR-ENGHYVLNGEKTFITSGMRADYYTVAVRTGDTGMGGIS 194 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 +L + G L +K+G ++ T L F N L+G N M I++ Sbjct: 195 LMLVEKGMEGFTQTPL-HKMGWWASDTATLYFDNVKVPVENLIGGENAGF-----MGIMM 248 Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++ + ++ M EA+ +A++R G LI + V++ D+A+ + A A Sbjct: 249 NFNNERLFLASACYGHMLGVFEEALDWAQQRETFGKPLIHRQVIRHKFVDMAMKMQAVRA 308 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + LA +S E A+ +A T + V E ++ +GG+GY+ + Sbjct: 309 VLEELAQRLQLGESPITEICMAKNLATSTLEY-------VANECLQILGGAGYMRGTKVE 361 Query: 432 RHYRESPANSILLGSGNAM 450 R YRE+ +I GS M Sbjct: 362 RIYRETKVMTIGGGSSEIM 380 >gi|297155712|gb|ADI05424.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces bingchenggensis BCW-1] Length = 390 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256 L+E G+D A +T++ + DG + L+G K W ++D + ++ + + F Sbjct: 133 LSEPSSGSDAAGLTTRAAREGDG-WTLTGSKAWITHGGIADFYTVMTRTGPDRTRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G +GL + K+G + + T ++ + + D + I L Sbjct: 192 LVP-----GDASGLSAAAPERKMGMKGSPTAQIHLEDVH---VPDARRIGEEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD+ + ++ + LA EA+ Y +R G + D ++ +AD+A I A Sbjct: 244 SALDAGRLGIAACSIGLAQAALDEAVAYTAQRRQFGHPVADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + S++AA A K +C A V +A++ +GG GY + + Sbjct: 304 ALYLAAARLRDAGRPFSKQAAMA-------KLFCTDTAMKVTTDAVQLLGGYGYTADFPV 356 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 357 ERYMREAKVLQIVEGT 372 >gi|294630414|ref|ZP_06708974.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292833747|gb|EFF92096.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 608 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDKHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399 P ++R++ AL A+ DE + + S E A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDEIQVKEANGEDASAEHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + A +A++++ GGSG+++E I ++ R+S +++ G+ Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447 >gi|239932220|ref|ZP_04689173.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291440583|ref|ZP_06579973.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291343478|gb|EFE70434.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 383 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 45/302 (14%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + + W P + S Y +G GLTE G+D ++++ Sbjct: 95 AKTVAAWGSEEQKRTWLPGLTSGAY--------------VGCFGLTEPGTGSDAGNLSTR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y ++G K F+++ +D ++ A+ G V L GL + + Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHRGVSAFLVPADAPGLTRRAVH 199 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMSVSGMR 329 K+G R AT EL +L D+ V GP E + L + MSV+ Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASAMLGP-EGKGFPVALSALAKGRMSVAAGC 250 Query: 330 VSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ D K Sbjct: 251 VGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELISDIAVDVDAARLLTWRVADLIDRGK 310 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + E++ A++ A + A A++ GG GYI+E + R++ ++ Sbjct: 311 PFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYE 363 Query: 445 GS 446 G+ Sbjct: 364 GT 365 >gi|188991130|ref|YP_001903140.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|167732890|emb|CAP51084.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. campestris] Length = 597 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 46/295 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPPGA 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KGISLFVTPKFKVDRDGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGL---- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV- 354 P + ++ + +++A +SV + L+E A+ Y R R +SG D+P Sbjct: 282 --PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPDKPAD 339 Query: 355 -------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITK 401 ++R + I + L+ A+ D A + R++ + PI+K Sbjct: 340 PIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 400 ACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454 >gi|326571368|gb|EGE21383.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis BC7] Length = 559 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 127/289 (43%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFVNVARLGTAIQGLAAPELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPITKYWCCK 406 ++ + AL + L+ F + ++ E + + ++ PITK + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEMLSLLTPITKAFLTE 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTKIQALDLL 451 >gi|325124630|gb|ADY84153.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 406 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373 >gi|317124404|ref|YP_004098516.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315588492|gb|ADU47789.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 389 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 50/370 (13%) Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYL------MAQLEAGHLMSPSVTSASMVALM 165 HD L S + F P V ++ + A L +A+++A + P+V + L+ Sbjct: 50 HDALVASDF---FAPHVPEEYDGVGADALATCIVIEEVARVDASACLIPAVNKLGSLPLI 106 Query: 166 TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225 A + R Y P P+ GL+E+ G+D A++ + ++ D Sbjct: 107 LA-------ASEDVKRRYLP----PLAHGETTFSYGLSEREAGSDTASMKCRARRDGDD- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 + L+G K W ++ +S+ + +LA + V F+V + S G + + K Sbjct: 155 WVLNGQKSWITNAGVSEYYTVLAVTDPDGPRGNNVTAFVVEK-----SDAGFTFGEKERK 209 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKI-LIYLDSAIMSVSGMRVSLAE-- 334 +G + + T EL F N + GD V G V D +KI L LD +++ + +A+ Sbjct: 210 LGIKGSPTRELHFDNVR--IPGDRVV--GEVGDGLKIALRTLDHTRVTIGAQAIGIAQGA 265 Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 A+ Y + R G + D ++ +AD+A+++ AA + + A AKS + Sbjct: 266 LDQAVAYVKERKQFGKRIADFQGIQFMLADMAMEVEAARQMVYVAA-----AKSERGDKD 320 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 K + +A V +A++ +GG+GY ++ + R R++ I G+ Sbjct: 321 LT-FFGAAAKCFASDVAMKVTTDAVQLLGGAGYTKDFPLERMMRDAKITQIYEGTNQIQR 379 Query: 452 LDVLNLLEKG 461 + + L KG Sbjct: 380 VVMARQLLKG 389 >gi|296107547|ref|YP_003619248.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|295649449|gb|ADG25296.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] Length = 375 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 36/281 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P+I S E L LTE G+D+ + +Q D K+ Sbjct: 108 WLPRIASGE-------------TLAALALTESNIGSDLEHVETQLLDAGDEFILKGSKKY 154 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++D F++LA +G++ LV + +GL + N +G RSN E+ F N Sbjct: 155 ITLGQIADLFLVLANCQGQLTAVLVEK-----DTSGLIITPMSNFLGLRSNMLAEIFFDN 209 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 LLG + + V I LD + + V L +A + Y ++R Sbjct: 210 CRIPKTNLLGSIGIGFNCV----IQTALDEGRYTTAYGCVGLGQACLDAALGYTQKRKQF 265 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 L + ++++ I ++ + AA L F E + + A A + I KY Sbjct: 266 DRRLDEHQLIQKMITEMVAQVKAARELCFYAG----ELRQQKNPAYIAETL--IAKYAAS 319 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KM V A++ G +G+ E + R+YR++ I+ G+ Sbjct: 320 KMVVFVSNHALQIFGAAGFEETYPVERYYRDAKVMEIIEGT 360 >gi|197106815|ref|YP_002132192.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196480235|gb|ACG79763.1| acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 595 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 46/297 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ + ++ +DG Y ++G K ++S D ++LA++EG Sbjct: 162 MNLTEPHCGTDLGLLRTKAVPQADGTYKITGQKIWISGGEQDLTPNIVHLVLARIEGAPA 221 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + F+VP+ + D G N + L+ K+G NAT + G+L+G+ N Sbjct: 222 GVRGISLFIVPKFIPDANGEPGERNSVKCLGLEEKMGIHGNATCVISHEEATGWLVGEEN 281 Query: 304 VSTGPVEDMKIL-IYLDSAIMSVSGMRVSLAEAIHYA---------RRRHVSGGILIDQP 353 + +K++ + ++ A + V ++ AEA + A + R ++G D P Sbjct: 282 ------QGLKLMFVMMNEARLGVGLQGIAQAEAAYQAAAEFAKERLQGRSLTGPKNPDGP 335 Query: 354 --------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + RA+ + A TAL LA++ ++ R + Y +M P+ Sbjct: 336 ADPIIVHPDVRRMLLDSRALIEGGRAFMAWTALHGDLAHASEDEAVRQKGRDYMALMTPV 395 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + V ++AM+ GGSG+ E +++ R+ I G+ LD++ Sbjct: 396 VKAFLTDRGFKVCSDAMQVHGGSGFTEHFPASQYLRDVRIALIYEGTNGVQALDLVG 452 >gi|254482934|ref|ZP_05096170.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214036806|gb|EEB77477.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 610 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 35/308 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAF--IMLAQV----EGR 252 LTE G+D+ + S+ + +DG Y ++G K F+S+ M+D I+LA++ EG Sbjct: 179 LTESHCGSDLGLLRSKAEPQADGSYAITGQKIFISAGEHDMTDNIIHIVLARLPDAPEGT 238 Query: 253 VGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + EDG+ N + +++K+G NAT L F +L+G+ N Sbjct: 239 KGISLFIVPKVNVSEDGTLGELNAVHCASIEHKMGIHGNATAVLNFDGAKAYLIGEENRG 298 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQP 353 + + +A ++ M +S A+ YA+ R + +I P Sbjct: 299 LNCMFTFMNTARVGTAAQGLAHMELSFQGALAYAKDRLAMRSLTGPKNPDGPADPIIVHP 358 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA-----RIMAPITKYWCCKMA 408 ++R + + A + LA D +EE A A ++ PI K + + Sbjct: 359 DVRRMLLTQKAFAEGSRAFLYFLAMQGDIVDKGTEEEAKAADDLMSLLTPIAKAFMTETG 418 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFE 466 ++ GG G+I+E + + R+ + G+ LD++ +L G L Sbjct: 419 YEAANHGVQIFGGHGFIQEWGMEQIVRDCRIAMLYEGTTGIQALDLIGRKVLGSGGKLLT 478 Query: 467 QLFSTLEQ 474 + +E+ Sbjct: 479 NFTAMIEE 486 >gi|152977527|ref|YP_001377044.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026279|gb|ABS24049.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 379 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ + Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTTARREGNH-YILNGSKIFITNGGIADIYVVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + + + G + ++K+G RS+ T E+ F + LLG+ Sbjct: 172 TDLEAKQRGTSAFIVESDAPGFLIGKKESKLGIRSSPTTEIIFEDCRIPVENLLGEEG-- 229 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + KI + LD ++ V +A+A + YAR RH G + Q + + Sbjct: 230 ----QGFKIAMQTLDGGRNGIAAQAVGIAQAALDVSVAYARERHQFGKPIAAQQGISFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A ++ AA L+++ A E +E+A ++K + +A V EA++ Sbjct: 286 ADMATNVEAARLLTYQAAWLESEGLPYGKESA-------MSKLFAGDIAMKVATEAVQIF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 339 GGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|328544910|ref|YP_004305019.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326414652|gb|ADZ71715.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 593 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 34/291 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ D ++LA++ Sbjct: 160 MNLTEPQAGSDLNALKARAERRPDGTYRIFGQKIFITYGEHDITDNIVHLVLARLPDAPA 219 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + FLVP+ L EDGS N + +++K+G + T + + + G+L+G Sbjct: 220 GTRGISLFLVPKFLVNEDGSLGARNDVRCAGVEHKLGIHGSPTCTMIYGDGEGAIGWLVG 279 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA--RRRHVSGG-------ILID 351 + N + M L I + + +A+ YA RR+ + G + Sbjct: 280 EENRGLACMFTMMNNARLAVGIQGLGIAERAFQQALAYALDRRQGRAPGDAGEGMSAIAG 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCC 405 P +KR++ + A A+ F A++ D A ++ A A ++ PI K Sbjct: 340 HPDIKRSLLFMQARTQVARAICFACAHAIDMASLATDPEAKAHWSDRAGLLTPIAKALST 399 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + V + ++ GG GYIEE A+H R++ I G+ +D++ Sbjct: 400 DIGVEVASTGVQIHGGMGYIEETGAAQHLRDARIAPIYEGTNGIQAIDLVQ 450 >gi|304405251|ref|ZP_07386911.1| acyl-CoA dehydrogenase domain protein [Paenibacillus curdlanolyticus YK9] gi|304346130|gb|EFM11964.1| acyl-CoA dehydrogenase domain protein [Paenibacillus curdlanolyticus YK9] Length = 379 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 18/263 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P+ ++ A+G GL+E GTD ++ ++ + D KW ++D +++ A+ Sbjct: 111 PLLESGEAVGAFGLSETSAGTDAQSLETKAVRNGDSFLLQGTKKWISLGQLADIYLIFAK 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 EG++ FLV R + GL + + G R + EL L S G Sbjct: 171 CEGQISLFLVER-----NTPGLTVEPIPPLAGLRGSMLAELRLEQCR-VREDSLVGSIGT 224 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 M L LD +V+ V +A A+ YA R+ G L + ++++ I ++ Sbjct: 225 GLSMIGLFCLDYGRYTVAWGCVGIARSCIEHALAYAASRNQFGSQLSEFQLIQKMITEMV 284 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + + AA L DE S + KY+ K+ ++++ G SG Sbjct: 285 VGLEAARLLCLEAGRMRDEGDPDSIMETWK------AKYFASKLVVETAGKSVQIHGASG 338 Query: 424 YIEERSIARHYRESPANSILLGS 446 ++ + RHYR++ I+ G+ Sbjct: 339 LVQGTPVERHYRDAKVYEIIEGT 361 >gi|294141410|ref|YP_003557388.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] gi|293327879|dbj|BAJ02610.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] Length = 598 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 57/374 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + A+ + + + + K+ S E+ T + LTE GT Sbjct: 125 MYPGLTHGAYAAIHAHGSDALKQKYLEKLVSGEWTGT-------------MNLTESHAGT 171 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + +G++ +SG K F+SS D ++LA++ EG G F V Sbjct: 172 DLALLRTKAVEAGEGLFAISGEKIFISSGDHDLAENIIHLVLARLPNAPEGVKGISLFAV 231 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+++ + G N LC L++K+G N+T + F G L+G+ + + M Sbjct: 232 PKIMVNADGSLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLRAMFTMM 291 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIA 360 L + + ++ A+ YA+ R G IL+ V + +A Sbjct: 292 NQARLGVGVQGLGVSEIAYQNALAYAKDRIQGRGLSGVKDASQAADPILVHGDVRRMLMA 351 Query: 361 DIALDIAAATALSFRLANSFDEAKSR------SEEAAYARIMAPITKYWCCKMAPAVIAE 414 + + A AL + A DEA+ A + PI K + + Sbjct: 352 QKSFN-EGARALIGQQALWLDEAERHPDADKAKAANKLAALFTPIVKGFITDRGFNACVD 410 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF---EQL 468 A + GG GYI E + ++ R+ + G+ LD++ + +KG L E + Sbjct: 411 AQQVFGGHGYIHEWGMEQYVRDIRIAMLYEGTNGVQALDLVGRKVMGDKGATLMVWSEMV 470 Query: 469 FSTLEQDLGSSGKK 482 + + +++G K Sbjct: 471 KTLIGENMGKDAMK 484 >gi|169628168|ref|YP_001701817.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169240135|emb|CAM61163.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length = 385 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T+ ++ D Y ++G K F++S + +++ A G G V Sbjct: 127 LAITEPGGGSDVGHLTTSAKRDGD-HYIVNGAKTFITSGVRADYVVTAVRTGGPGAAGVS 185 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL D G R +K+G RS+ T EL F++ L+G N + + Sbjct: 186 LLLIDKDTPGFEVARKLDKMGWRSSDTAELSFTDVRVPAENLVGSENTGFAQIAGAFVSE 245 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A + + + L + + R R G LI + ++ +A++A I A + L Sbjct: 246 RIGLAAQAYASAQRCLDLTVEWCRNRETFGRPLISRQSVQNTLAEMARRIDVARVYTHAL 305 Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + +S E +A+ A W V + ++ GG GY+ E I R YR Sbjct: 306 VDRAIAGESNLIAEVCFAKNTAVEAGEW-------VANQGVQLFGGMGYMAESEIERQYR 358 Query: 436 ESPANSILLGSGNAMVLDVL 455 + I +G G +L L Sbjct: 359 D--MRIIGIGGGTTEILTSL 376 >gi|93004979|ref|YP_579416.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92392657|gb|ABE73932.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 606 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 37/291 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE + GTD+ + S+ D Y LSG K F+SS D I+LA++ EG Sbjct: 165 LTEPQCGTDLGQVKSKAIPQDDASYKLSGTKIFISSGEHDLTENIIHIVLARLPDAPEGT 224 Query: 253 VGC--FLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ L E G NG+ +++K+G S+AT L F + G+L+G+ N Sbjct: 225 RGISLFIVPKFLPNAEGEIGERNGVSCGSIEHKMGISSSATCVLNFDDAVGYLIGEPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------------VSGGILIDQ 352 + + + I ++ +S A+ YA+ R V+ I+ Sbjct: 285 LKAMFTFMNTARIGTGIQGLAHTELSFQNALPYAKDRRSMRTLSGTKDPEKVADAIIHHA 344 Query: 353 PVMKRAIADIALDIAAATAL--SFRLANSFDEAKSRSEEAAYAR------IMAPITKYWC 404 V + + A + + S R A+ + ++ + + PI K + Sbjct: 345 DVRRMLLTQKAFAEGGRSMIYHSARYADKMAQGIINGDDEEFEKWDDKLGFYTPILKGFL 404 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ + GG GYI+E + R++ ++ G+ LD+L Sbjct: 405 TELGIEAAKHGQQVYGGHGYIKEWGMELIARDARIATMYEGTTGIQALDLL 455 >gi|322371814|ref|ZP_08046357.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] gi|320548699|gb|EFW90370.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] Length = 380 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 23/271 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + + L+E G+D+ A+ + +K D Y L+G K W + ++D + A+ Sbjct: 113 PLNQGTDIGAFALSEPGAGSDVPAMDTTAEKDGD-EYVLNGGKLWISNGSVADTVTVFAK 171 Query: 249 VEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + G V R ED +G + ++K+G++ T EL FS+ LLG+ Sbjct: 172 TDPDAGNKGISSFVVRPEED---DGFHVEGTEHKLGDKGCPTAELRFSDLRIPEDRLLGE 228 Query: 302 LNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G V +K L + A S+ R + +A+ YA++R + D ++ + Sbjct: 229 --EGDGFVHALKTLNGGRITIAARSIGLARAARDDALEYAQQREQFDRPISDFQTIQHKL 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ + AA L R A+ + + AA A++ A +++ V E ++ Sbjct: 287 ADMDTKVQAAKLLMHRAADRKIRGEDFIKHAAQAKLFA-------SEISREVANEGIQIH 339 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY + + R+YR++ N I G+ + Sbjct: 340 GGYGYTTDFDVERYYRDAKLNEIYEGTSEVL 370 >gi|317405891|gb|EFV86173.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 397 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 25/244 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G+D + ++ K +DG Y L+G+K W +SP++D F++ A+ V G + Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTADG-YKLTGNKMWITNSPIADVFVVWAKCVGGEFDGKI 195 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKI 314 +LE G+ GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 196 RGFILEKGT-KGLTAPAIHGKVGLRASITGEIVMDEVEVSADQMMPGVSGLKGP------ 248 Query: 315 LIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AEA H AR+ R G L ++++ +AD+ +I A Sbjct: 249 FTCLNSARYGIAWGAIGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLA 308 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C A + A + +GG+G +E Sbjct: 309 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFG 361 Query: 430 IARH 433 +ARH Sbjct: 362 VARH 365 >gi|301632570|ref|XP_002945354.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 376 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 30/273 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP+ + + LTE G+D +A+ + + DG Y L+G K F++S + ++ Sbjct: 110 APLARGEMLGAFCLTEPHVGSDASALRTTAVQEGDG-YVLNGVKQFITSGQNGQVAIVIA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295 V G+ G FLVP G RL++K+G S+ T ++ F +N Sbjct: 169 VTDKAAGKKGMSAFLVPT-----DTPGYVVARLEDKLGQHSSDTAQIHFDGCRIPAANLI 223 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G ++ +E +I I A S+ R + A+ Y++ R G + + + Sbjct: 224 GAEGEGYKIALSALEGGRIGI----AAQSLGMARAAFECALQYSKERESFGQAIFEHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A+ A I AA L + A+ D + +EAA A++ A +MA V + A Sbjct: 280 GFRLAECATQIEAARQLIWHAASLRDAGQPCLKEAAMAKLFAS-------EMAERVCSAA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG G + + + R YR+ I G+ + Sbjct: 333 IQTLGGYGVVSDFPLERIYRDVRVCQIYEGTSD 365 >gi|167563902|ref|ZP_02356818.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis EO147] gi|167571037|ref|ZP_02363911.1| putative glutaryl-CoA dehydrogenase [Burkholderia oklahomensis C6786] Length = 395 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 19/251 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGSKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +++ + +LE G GL + K+G R++ T E+ + F + + N+ G Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPTIHGKVGLRASITGEIVLDDAF---VPEENIMPG 239 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADI 362 L+SA ++ + AE+ + R++V G L ++++ +AD+ Sbjct: 240 VKGLRGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKLADM 299 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +I RL DE + E + I K C A + A + +GG+ Sbjct: 300 QTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGN 352 Query: 423 GYIEERSIARH 433 G +E +ARH Sbjct: 353 GISDEFGVARH 363 >gi|168186034|ref|ZP_02620669.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum C str. Eklund] gi|169295969|gb|EDS78102.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum C str. Eklund] Length = 379 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F+++ ++D FI A + G + Sbjct: 123 FGLTEPNAGTDASGQQTVAVKQGDK-YILNGQKIFITNGGVADVFIAFAMTDKSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G ++++K+G R+++T EL F + L+G G MK Sbjct: 182 SAFIVEKGFKGFSIGKVEDKLGIRASSTTELIFEDCEVPAENLIGKEGRGFGIA--MKT- 238 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + VS + +A EA+ Y + R G L M A+ I AA Sbjct: 239 --LDGGRIGVSAQALGIAEGALEEAVEYMKERKQFGKQLYKFQGMGWMAAECKAKIEAAR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A + K + EAA A++ A T A V +A++ GG GY ++ + Sbjct: 297 YLVYKAAYNKMTGKPYTVEAATAKLFAADT-------AMEVATKAVQMFGGYGYTKDYPV 349 Query: 431 ARHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 350 ERMFRDAKITEIYEGT 365 >gi|91777411|ref|YP_552619.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91690071|gb|ABE33269.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 379 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 140/334 (41%), Gaps = 48/334 (14%) Query: 141 YLMAQLEAGH--LMSPSVTSASMVALMTTPRVHKD-WAPKIFSREYDPTNKAPMQKTSVA 197 Y + GH +++ V A + L VH D AP I + + + KT Sbjct: 62 YGGGGGDFGHAAILNEEVNRAGLSGLGFG--VHSDVIAPYIARIGNEEQKQKWLPKTCTG 119 Query: 198 ---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV 253 + +G+TE G+D+ AI + + D Y ++G K F+S+ + +D I++ + + Sbjct: 120 ESILAIGMTEPGTGSDLKAIRTTALRDGDE-YVINGSKTFISNGLNADLIILVCKTDPSA 178 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLL 299 G V ++ + + G R +K+G S T EL F N F +L+ Sbjct: 179 GSKGVSLIVVEATREGFRRGRKLDKVGMHSQDTAELFFDNVRVPVSNRLGEEGKGFAYLM 238 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G+L P E + I AI + + + L I+Y + R + D K + Sbjct: 239 GEL-----PQERLSI------AIGAAAKLEACLEHTINYVKDRRAFNQTVWDFQNTKFKL 287 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRS---EEAAYARIMAPITKYWCCKMAPAVIAEAM 416 ADI A ATA+ + + E R EEAA A++ A + + + + Sbjct: 288 ADIK---AQATAVRVLVDHYLAEHVRRRLTLEEAAIAKLFA-------TESLGKALDDMV 337 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E +AR + ++ N I G+ M Sbjct: 338 QLHGGYGYMLEYPVARAFADARVNRIYGGTSEVM 371 >gi|78046920|ref|YP_363095.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035350|emb|CAJ22995.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 407 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 147 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 204 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 + G+ Y R + K+G S T + F N + N+ E K+ + LD Sbjct: 205 FVVPADAPGISYGRKEEKMGWNSQPTRGVSFENV---RIPAENLLGKEGEGFKMAMKALD 261 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 262 GGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQMVH 321 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 322 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 375 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 376 RDSRVHRILEGTNEVMRMIVARHLLNG 402 >gi|260221282|emb|CBA29691.1| Long-chain specific acyl-CoA dehydrogenase,mitochondrial [Curvibacter putative symbiont of Hydra magnipapillata] Length = 412 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + ++E G+D+ I S + DG Y L+G K F+++ +D +++A+ G G Sbjct: 149 IAMSEPAAGSDLQGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGT 208 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311 L+ L+E G P QRLK K+G ++ T EL F N L G + G + Sbjct: 209 SLL--LVERGMPGFSVGQRLK-KMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICL 265 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M+ L + L AI +VS + ++ + Y + R V G + + +A++ + A Sbjct: 266 MEQLPWERLQIAIGAVSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVA 325 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + + A+ A KYW + V+ E ++ GG GY+ E Sbjct: 326 RVFVDKCCELIGKDQLDTATASMA-------KYWTTDLQCKVMDECVQLFGGYGYMWEYP 378 Query: 430 IARHYRESPANSILLGSGNAM 450 I R Y ++ I G+ M Sbjct: 379 ITRAYADARVQRIYGGTNEIM 399 >gi|224370925|ref|YP_002605089.1| Acd12 [Desulfobacterium autotrophicum HRM2] gi|223693642|gb|ACN16925.1| Acd12 [Desulfobacterium autotrophicum HRM2] Length = 387 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 19/258 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256 G G+TE G+D+ A+ + + D Y L+G K W ++ ++D I A + +G Sbjct: 123 GFGITEADAGSDVMAMATTAEDKGDH-YLLNGSKTWISNAAIADVLICYAYTDKEIGTKG 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L ++E + G+ L+ K+G+ S+ T E+ N + N+ P + KIL Sbjct: 182 LSAFVIEPKNFPGITTSALE-KLGSHSSPTGEVFLDNV---KVPKENLLGKPGDGAKILF 237 Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L +A V + L EAI Y R G + + + IA +A +I AA Sbjct: 238 GSLNHTRLSAAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +R A D+ + + KY ++A AM +G GY E + Sbjct: 298 FMVYRAAFEKDQGNINN------GLDVAKAKYLAGEVATKASNFAMRILGAYGYSTEYPV 351 Query: 431 ARHYRESPANSILLGSGN 448 AR YR++P S++ GS N Sbjct: 352 ARFYRDAPTYSMVEGSAN 369 >gi|171057876|ref|YP_001790225.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170775321|gb|ACB33460.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 386 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP D+ P++ S E + + LTE GTD A++ ++ + D Y Sbjct: 102 TPEQKADYLPRVASGE-------------LIMSFALTEPDAGTDAASLKTRAELDGDH-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 L+G K F++ +P + AF ++A+ G V F+VP G P GL + K+G Sbjct: 148 ILNGTKRFITNAPRAGAFTLMARTGGPGAGGVSSFIVPA----GLP-GLKLGKPDKKMGQ 202 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334 R T ++ N + N+ G P + K + LD +++S + LA E Sbjct: 203 RGTKTCDVILENV---RVPAANIIGGVPGQGFKTAMKVLDRGRLNISAVSCGLASRIIDE 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + YAR R G + + +++ +AD ++ A +L +A FD AK Sbjct: 260 SRRYARERKQFGKAIGEFQLIQAMLADSQAEMLAGWSLVKDVALRFD-AKPAHVSDPDVS 318 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + K + +M V ++ GG+GYI E + R YR++ Sbjct: 319 MRVSCAKLFATEMVGRVADRGVQIHGGAGYINEYPVERFYRDA 361 >gi|73540508|ref|YP_295028.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72117921|gb|AAZ60184.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 397 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K++ G Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVNGG-YELTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLAGEDGKEDIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232 Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + + N+ G V+ +K L+SA ++ + AE A Y R G L Sbjct: 233 --VPEENIMPG-VKGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLA 289 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +I RL DE + E + I K C + Sbjct: 290 QTQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLD 342 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E + RH Sbjct: 343 IARVARDMLGGNGISDEFGVIRH 365 >gi|325919917|ref|ZP_08181906.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325549626|gb|EGD20491.1| acyl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 393 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 24/270 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256 LTE G+D A++ ++ Q+ D Y L+G K F+S + +D +++A+ +G G F Sbjct: 133 LTEPGAGSDAASLKTRAQRDGDA-YVLNGSKAFISGAGATDVLVVMARTGDDGARGISAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +VP G+ Y R + K+G S T + F++ G LLG G MK Sbjct: 192 VVP-----ADAPGISYGRKEEKMGWNSQPTRGVTFTDVRIPAGNLLG--KEGEGFKMAMK 244 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L ++ A S+ + +L A Y R G L D ++ +AD+A + AA Sbjct: 245 ALDGGRINIAACSLGAAQGALDAARRYMGERRQFGKKLADFQALQFKLADMATQLVAARQ 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D A + + K + A+ +A++ GG GYI E I Sbjct: 305 MVHTAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIE 358 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R R+S + IL G+ M + + L G Sbjct: 359 RLLRDSRVHRILEGTNEVMRMIIARHLLNG 388 >gi|288931380|ref|YP_003435440.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] gi|288893628|gb|ADC65165.1| acyl-CoA dehydrogenase domain protein [Ferroglobus placidus DSM 10642] Length = 381 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 36/266 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML----AQVEG---R 252 + +TE GTD+AA+ ++ K D + ++G K F+++ + ++ AQV+ Sbjct: 121 IAVTEPDCGTDVAAMRTRAVKEGDE-WVINGTKQFITNGSVGIYTVVLAKTAQVDPPHRG 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + FLV + E Y+ R K+G + T E+ N L+G+ N Sbjct: 180 ISAFLVEQDREG-------YEARPIEKMGMHCHDTCEVALKNVRVPADHLIGEENRGF-- 230 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363 +++ + + + + ++ + +A A+ YA+ R G LI+ ++ +A++ Sbjct: 231 ---YQLMAFFNESRVKIAALHTGIAIGAYERALEYAKERKAFGKPLIEHQAIQFKLAEMF 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 DI AA L F+ A D+ K ++ A++ A +MA V EA++ GG G Sbjct: 288 KDIEAAKLLVFKAAWLIDQGKPDPALSSAAKLFA-------SEMAVKVTYEAVQIFGGYG 340 Query: 424 YIEERSIARHYRESPANSILLGSGNA 449 Y +E + R+YR++ +I G+ A Sbjct: 341 YSKEYDVERYYRDARVGTIYEGTSEA 366 >gi|229102936|ref|ZP_04233628.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] gi|228680481|gb|EEL34666.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] Length = 569 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A D+A S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|197119199|ref|YP_002139626.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] gi|197088559|gb|ACH39830.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] Length = 385 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 49/293 (16%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K + P+I S EY A LTE G+D A +T+ D + L+G Sbjct: 108 KKKYIPRICSGEY------------AAGAFALTETGAGSDPAGMTTSAVAEGDQ-WVLNG 154 Query: 231 HKWFLSS-PMSDAFIMLAQVE-----GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 K F++S P + F++ A + G+ + CFLV E G+P GL + + K G + Sbjct: 155 SKIFITSAPYAGVFVVWAVTDKDAPKGKGISCFLV----EQGAP-GLVIGKQEEKTGQHA 209 Query: 284 NATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334 +AT E+ F N L+G LN ++ G + +I I G+ V LA Sbjct: 210 SATCEVLFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGI-------GSLGLGVGLAAMD 262 Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 A YA R G + + ++ +A+ ++ AA L + A D KS ++EA+ A Sbjct: 263 FATRYASERVQFGQKITNFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGKSFAKEASMA 322 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ A C A++ +GG GY + + R+ R++ +I G+ Sbjct: 323 KMYATEAANRACY-------SAVQMLGGYGYTRDFPVERYARDARITAIYEGT 368 >gi|160896784|ref|YP_001562366.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160362368|gb|ABX33981.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 601 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 89/379 (23%), Positives = 161/379 (42%), Gaps = 67/379 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHVHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV-EGRVGC----- 255 D+ + ++ + ++ +G Y ++G+K F+S+ D ++LA++ + VG Sbjct: 175 DLGLLRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTDNIVHLVLARLPDAPVGSKGISL 234 Query: 256 FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ + DGS N + L++K+G NAT ++ G L+G N Sbjct: 235 FVVPKFVVKADGSLGERNPIFCGALEHKMGIHGNATAQINIDGAIGTLVGQPNKGL---- 290 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQP-------- 353 + + +++A + V + L E A+ YA+ R +SG D+P Sbjct: 291 -QAMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKPADPIIVHP 349 Query: 354 ----VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYARIMAPITKYWCCKM 407 ++ A A A T +F + F+ + K R + A ++ PI K + Sbjct: 350 DVRRMLLTAKAYAEGGRALVTYCAFLIDKEFNHPDEKVRKDSAELVALLTPIVKAFITDN 409 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNL 464 + + GG G+I E + + R++ N I G+ LD+L L +G +L Sbjct: 410 GWTATTMSQQVYGGHGFITEWGMEQFVRDARINMIYEGTNGIQALDLLGRKVLGNQGASL 469 Query: 465 --FEQLFSTLEQDLGSSGK 481 F +L + L ++ G + K Sbjct: 470 KKFGKLVAQLVEEEGVNEK 488 >gi|167645838|ref|YP_001683501.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167348268|gb|ABZ71003.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 387 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 51/296 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + P + S E+ + L ++E G+D+ ++ ++ +K D Y Sbjct: 112 TPEQKRKYLPGLISGEHLGS-------------LAMSEAGSGSDVMSMRTRAEKKGD-RY 157 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 L+G K W +SP +D ++ A+ G V FL+ + + G + +K G R Sbjct: 158 ILNGTKFWITNSPTADTLVVYARTGEGNGGVSTFLIEKGM-----RGFSVSKKLDKFGMR 212 Query: 283 SNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRV 330 + T EL F N G + G + ++ LD +SG M+ Sbjct: 213 GSDTAELVFEDCEVPAENVMGPVGGGAGI---------LMSGLDYERTVLSGGPLGIMQA 263 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 L + Y R R G + +M+ +AD+ + + +A A + +A + D K+ +A Sbjct: 264 CLDVVLPYVRERKQFGKAIGSFQLMQAKVADMYVALNSARAYVYAVARACDAGKTTRFDA 323 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A A ++A + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 324 AGAILLA-------SENAVRVSLEAVQALGGAGYTKEWPVERFVRDAKLYDIGAGT 372 >gi|218903487|ref|YP_002451321.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|218535100|gb|ACK87498.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] Length = 569 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 23/273 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + L+G K W ++ M+D +++ + + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTAWKLNGEKQWITNAHMADVYVVFTKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R YR++ + I G+ L V +L K Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMK 411 >gi|134098043|ref|YP_001103704.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338] gi|291007193|ref|ZP_06565166.1| acyl-CoA dehydrogenase-like protein [Saccharopolyspora erythraea NRRL 2338] gi|133910666|emb|CAM00779.1| acyl-CoA dehydrogenase-like [Saccharopolyspora erythraea NRRL 2338] Length = 389 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 32/265 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259 LTE G+D AA+ Q + + DG Y L G K F+S SD ++++A+ G G + Sbjct: 133 LTEPEAGSDAAAL--QTRAVRDGDHYVLDGVKQFISGGGNSDVYVVMART-GEPGPKGIS 189 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTG 307 + +G GL + + K+G + T ++ F GF + + G Sbjct: 190 TFVVEGDTPGLSFGPNEKKMGWNAQPTRQVVFQGVRVPATHRLGEEGIGFRIAMAGLDGG 249 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L A S+ G R +L +++ Y R G L D V++ +AD+A ++ Sbjct: 250 ---------RLSIAACSLGGGRAALDKSLGYVHERSAFGSKLSDFQVLRFKLADMATELE 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L +R A + D ++ + R+ A + K AV EA++ GG GY+ E Sbjct: 301 AARMLLWRAAWALD-----VKDPSATRLCA-MAKRLATDAGFAVANEALQIHGGYGYLAE 354 Query: 428 RSIARHYRESPANSILLGSGNAMVL 452 + + R+ + IL G+ M L Sbjct: 355 YGLEKIVRDLRVHQILEGTNEIMRL 379 >gi|119896685|ref|YP_931898.1| acyl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119669098|emb|CAL93011.1| probable acyl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 377 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----C 255 LTE G+D +A+ + + D + L+G K F+++ +D I+ A + G C Sbjct: 123 LTEPHVGSDASALRTTAVRDGDD-WVLNGVKQFITTGREADVAIVFAVTDKAAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 F+VP + G R++ K+G +++ T ++ F N LLG ++ Sbjct: 182 FIVPT-----ATPGYIVARIEEKMGQKASDTAQILFENCRVPADALLGAEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A + R +L A+ YA+ R G + + + +AD+A + A Sbjct: 237 LEAGRIGI----ASQCLGMARAALEAAVKYAQERETFGKPIFEHQAVNFRLADMATQLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A+ D + +EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 293 ARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAEKVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRVCQIYEGASD 365 >gi|119718511|ref|YP_925476.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119539172|gb|ABL83789.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 389 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 18/249 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P AIG GLTE G++ A + ++ ++ G + L G K W + ++D ++ A Sbjct: 122 PRMAAGEAIGCFGLTEPDFGSNPAGMRTRARQEPSGDWVLDGTKMWITNGSVADVAVVWA 181 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 Q EG + F+VP G +K K+ R++ T EL +L +++ Sbjct: 182 QTEGGIRGFVVPT-----DTPGFSAPEIKKKMSLRASVTSELVLDGVRLPADAVLPEVSG 236 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +GP+ + + A +V R L AI Y R R + L + + +AD+ L Sbjct: 237 LSGPLSCLNEARF-GIAFGAVGAARDCLETAIAYTREREIFDKPLAAYQLSQAKLADMTL 295 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A L+ +L DE + R E+ + ++ + A A+ E+ +G +G Sbjct: 296 ELGKAMLLALQLGRLKDEGRLRPEQVSLGKLN-------NVREALAIARESRTLLGAAGI 348 Query: 425 IEERSIARH 433 E + RH Sbjct: 349 TLEYPVLRH 357 >gi|119387117|ref|YP_918172.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119377712|gb|ABL72476.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 403 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K G Y L+G K W ++P++D F++ A+ E G+V Sbjct: 145 FGLTEPDAGSDPAGMRTVARKTGGG-YVLNGSKMWISNAPIADVFVVWAKSEAHGGKVRG 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F +L+ G+P GL ++K K+ R++ T E+ N LL ++ GP Sbjct: 204 F----VLDKGTP-GLSAPKIKGKLSLRASITGEIVMENVEVGEDALLPNIEGMGGP---- 254 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y RH L + ++ +AD+ +IA Sbjct: 255 --FGCLNRARYGISWGAMGAAEDCWFRARQYGLDRHQFNRPLAATQLYQKKLADMQTEIA 312 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ FDE K +A M I K C A + +A + GG+G Sbjct: 313 LGLQASLRVGRLFDEGK-------FAPEMISIVKRNNCGKALEIARQARDMHGGNGIQIG 365 Query: 428 RSIARH 433 + RH Sbjct: 366 YHVMRH 371 >gi|332662453|ref|YP_004445241.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] gi|332331267|gb|AEE48368.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] Length = 381 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 30/274 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 GLTE G+D + ++ D Y ++G K F++ S +A V R G L Sbjct: 124 GLTEPNTGSDAGRMKCVAERDGD-YYVINGSKNFITHGASGN---VAVVIVRTGELLDSH 179 Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 ++E G+P G + +NK+G R++ T E+ F N +LG+ G ++ M Sbjct: 180 GMSAFVVERGTP-GFLAGKKENKLGMRASETAEMIFDNCRVHKSQMLGE--EGEGFIQSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 KIL D +S++ + + +A ++ Y++ RH G + + + +AD+A I Sbjct: 237 KIL---DGGRISIAALSLGIARGAYLASVKYSKERHQFGQAIANFQAISFKLADMATKIE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ L + D ++ ++ ++ + KY+ + A V +A++ GG GYI++ Sbjct: 294 ASELLVRKAGELKDLGQNVTK-------LSAMAKYFASETAVEVSTDAVQIHGGYGYIKD 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + + YR++ +I G+ L + + KG Sbjct: 347 FPVEKFYRDAKLCTIGEGTSEIQKLVISREILKG 380 >gi|209964651|ref|YP_002297566.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] gi|209958117|gb|ACI98753.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] Length = 380 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 20/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ +++ D Y L+G K F+S + +D +I++ + G + Sbjct: 124 LTEPGSGSDAASLRTRAERVGD-HYVLNGTKAFISGAGATDLYIVMCRTGGPGPKGISAL 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 ++E G+P GL + + + K+G S T ++ F N G + ++ + Sbjct: 183 VVEKGTP-GLSFGKKERKMGWNSQPTAQVIFEDCRVPVENRLGEEGEGFRFAMKGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I A S+ G R L A + R G + + ++ +AD+A ++ AA + Sbjct: 242 INI----AACSLGGARTCLELARDHMTARQQFGRPIAEFQALQFMLADMATELDAARLMV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R A++ D A + K + + V +A++ GG GYI+E + R Sbjct: 298 HRAADALDRGDPE------ATTFCAMAKRFATDIGFKVCNDALQLHGGYGYIKEYPVERF 351 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ + IL G+ M + V L G Sbjct: 352 VRDLRVHQILEGTNQVMRMIVARRLLAG 379 >gi|206561535|ref|YP_002232300.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|198037577|emb|CAR53514.1| putative glutaryl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 395 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 24/243 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A++E + Sbjct: 136 FGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKLEENGKDAIR 194 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G GL + K+G R++ T E+ F L+ +++ GP Sbjct: 195 GFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPDENLMPNVSGLRGP------F 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAAT 370 L+SA ++ + AE+ + R++V G L ++++ +AD+ +I Sbjct: 248 TCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKLADMQTEITLGL 307 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 RL DE + E + I K C A + A + +GG+G +E + Sbjct: 308 QGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 360 Query: 431 ARH 433 ARH Sbjct: 361 ARH 363 >gi|169632452|ref|YP_001706188.1| acyl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|169151244|emb|CAO99930.1| acyl-CoA dehydrogenase [Acinetobacter baumannii] Length = 593 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 83/392 (21%), Positives = 159/392 (40%), Gaps = 51/392 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365 I + + A YA + R +G IL+ V +R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATARLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509 + ++D ++ E + + +F+ E+ A Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508 >gi|57525201|ref|NP_001006193.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus gallus] gi|53130416|emb|CAG31537.1| hypothetical protein RCJMB04_7j20 [Gallus gallus] Length = 416 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 34/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 158 LSEPGNGSDAGAASTVARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGISA 216 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 FLVP GL + ++K+G R+++T L F + LLG L + Sbjct: 217 FLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMG------F 265 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+A + YA +R G + ++ +AD+A+ + Sbjct: 266 KIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAIQFKLADMAVAL 325 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K ++EAA A++ A + A + +A++ +GG GY+ Sbjct: 326 ESARLLTWRAAMLKDNGKPFTKEAAMAKLAA-------SEAATNIAHQAIQILGGMGYVT 378 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E RHYR++ I G+ L + L K Sbjct: 379 EMPAERHYRDARITEIYEGTSEIQRLVIAGQLLK 412 >gi|260551298|ref|ZP_05825499.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260405612|gb|EEW99103.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 375 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|111222212|ref|YP_713006.1| butyryl-CoA dehydrogenase [Frankia alni ACN14a] gi|111149744|emb|CAJ61436.1| Butyryl-CoA dehydrogenase [Frankia alni ACN14a] Length = 382 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVGCF 256 L+E G+D AA+T+ + DG Y LSG K W +D + + A+ G + CF Sbjct: 127 LSEPHAGSDPAAMTTAARPDPDGGYRLSGTKAWVTHGGAADFYTVFARTSEDRSGGISCF 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LV D G+ + K+G ++ T ++ F + D + T L Sbjct: 187 LV-----DAGTAGMDVHPPERKMGLTASPTTQIGFDAAP--VPADRLIGTEGNGLRIALA 239 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ V LA+ A+ YA+ R G +ID + +AD+A + +A A Sbjct: 240 ALDAGRLGIAAAAVGLAQRALDDAVAYAKERQAFGKAIIDHQGLGFLLADMAAAVESARA 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D + A+ A+++A V +A++ GG+GY ++ + Sbjct: 300 TTLAAARRRDAGLPAGKAASIAKLVA-------TDAVMKVTEDAVQVFGGAGYTKDYPVE 352 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ RE+ I G+ L + L +G Sbjct: 353 RYMREAKIMQIFEGTNQIQRLVISRHLARG 382 >gi|126432845|ref|YP_001068536.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126232645|gb|ABN96045.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 611 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 48/371 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFLVDFETGELGERNGAFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDKTAPR 342 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR-IMAPI 399 + P ++R++ AL A D A ++ SE A +M PI Sbjct: 343 VTITHHPDVRRSLMTQKSYAEGLRALYLYTATFQDTAVAKAVHDVDSELAVRVNDLMLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457 K + A A + E+++ GGSG++++ I ++ R++ +S+ G+ D + Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462 Query: 458 LEKGTNLFEQLFSTLEQDLGS-SGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514 + + +EQ + S SG + R ++ ED + +A LT + A + Sbjct: 463 VRDKGQALAYVAGQIEQFVKSESGNGRLKAERALLATALEDVQAMAASLTGYLMAAQENP 522 Query: 515 AALYRAGMNDI 525 A LY+ G+ + Sbjct: 523 AELYKVGLGSV 533 >gi|91977574|ref|YP_570233.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91684030|gb|ABE40332.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 375 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + + ++ D Y ++G K F++S + I++ V G+ G Sbjct: 120 GFALTEPQAGSDASNLRTTARRDGDH-YVINGAKQFITSGKNGQLIIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R+++K+G S+ T +L F++ L DL + E + Sbjct: 179 ITAFIVPT-----DTPGFEVVRVEHKLGQHSSDTCQLAFNDMR--LPADLRLGA-EGEGL 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALSNLEGGRIGIASQAVGMARAAFEVARDYARERITFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAA + A+ + EA+ A+++A + A AV + A++ +GG GY+ Sbjct: 291 AAARQMVLHAASLREAGLPCLTEASMAKLLA-------SEAAEAVCSAAIQTLGGYGYLN 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 344 DFPLERIYRDVRVCQIYEGTSD 365 >gi|304311073|ref|YP_003810671.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301796806|emb|CBL45018.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 596 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 79/359 (22%), Positives = 143/359 (39%), Gaps = 64/359 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE + G+D+ + ++ + +DG Y ++G K Sbjct: 149 YLPKLVSAEWTGT-------------MCLTEPQAGSDVGLVKTRAEPENDGSYRITGTKI 195 Query: 234 FLSSPMSD-----AFIMLAQV----EGRVGC--FLVPRLL-----EDGSPNGLCYQRLKN 277 F++ +D ++LA++ +G G F+VP+ L E GS N + L+ Sbjct: 196 FITQGENDYSTNIIHLVLARLPDAPKGPKGISLFIVPKFLPTPKNEPGSRNAVSCGALEK 255 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++ T L F G+++G N + M LD I + +S A+ Sbjct: 256 KMGLKASPTCVLNFDGATGWMIGSPNGGLAAMFTMMNAARLDVGIEGLGAAELSFQGALA 315 Query: 338 YARRR------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD---- 381 YAR R +I P ++R + AL++ +A + D Sbjct: 316 YARERLQMRAPTEPVCPEKPADPIIAHPDVRRMLMTQKALSEGCRALAYSIALALDTQDH 375 Query: 382 -EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 + + A ++ PI K + ++ GG GYI E + + Sbjct: 376 ASGDVKKQAADLIALLTPINKAFLTDRGLECANYGVQVFGGHGYICENGMEQ-------- 427 Query: 441 SILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDK 498 +V DV + L+ +GTN + + GS GK V + + + C +K Sbjct: 428 ---------IVRDVRIALIYEGTNGIQANDLIGRKLAGSRGKLVFDYIDQAEAFCLGNK 477 >gi|163761042|ref|ZP_02168120.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] gi|162281823|gb|EDQ32116.1| probable acyl-CoA dehydrogenase [Hoeflea phototrophica DFL-43] Length = 593 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 105/469 (22%), Positives = 191/469 (40%), Gaps = 78/469 (16%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGP--GGERWDK-VEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L+ G G D V P W L R I G + Sbjct: 31 LGEDLVDAILAEAGRFATDQIAPLNEIGDTHGAVLEDAAVTTPPGWKELYRNWIDGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALM--TTPRVHKDWA 175 F + A ++ L G + P++T ++ AL T + + Sbjct: 91 LTGPEEFGGQGLPMLLSVAALEMWNSGSLAFG--IGPTLTMGAVEALEKHATDELKARYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 ++ + E+ T + LTE + G+D+ A+ ++ + + DG Y + G K ++ Sbjct: 149 EQLVTGEWMGT-------------MNLTEPQAGSDLNALKARAEPVGDGTYRIFGQKIYI 195 Query: 236 S---SPMSDAFIML---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNK 278 + +D I L A G + FLVP+ +DGS N + L++K Sbjct: 196 TYGEHDFTDNIIHLVLARLPDAPAGTRG-ISLFLVPKFFVGDDGSLGARNDVFCSGLEHK 254 Query: 279 IGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +G ++ T + + + G+L+G+ N + M +++A ++V V Sbjct: 255 LGIHASPTCTMIYGDGKFGDQPGAIGWLIGEENRGLACMFTM-----MNNARLAVGMQGV 309 Query: 331 SLAE-----AIHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRL 376 ++AE A+ YAR R G+ +I+ P + R + + A A+ + Sbjct: 310 AIAETAYQKALAYARERTQGRAPGFKGEGMSPIIEHPDVARMLMTMKALTQGARAICYSC 369 Query: 377 ANSF--------DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + DEAK+ +E A+ ++ PI K + + V + ++ GG G+IEE Sbjct: 370 AEALELARVSEGDEAKAWAERAS---LITPIAKAFATDIGMEVASLGVQVHGGMGFIEET 426 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475 AR+ R++ I G+ +D++ L G + + L S + D Sbjct: 427 GAARYLRDARIAPIYEGTNGIQAIDLVMRKLPLSGGDTVKALISDFKAD 475 >gi|268568006|ref|XP_002640134.1| Hypothetical protein CBG12633 [Caenorhabditis briggsae] Length = 421 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 36/281 (12%) Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252 S AIG L+E G+D A+ + +K D + +SG K W ++ + F++ A + Sbjct: 154 SEAIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANADPS 212 Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G CFLV R E G+ + ++K+G RS +T + F N +LG+ Sbjct: 213 KGYKGITCFLVDRNQE-----GVSVGKKEDKLGIRS-STCSVHFDNVRVHKSAILGEYG- 265 Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + K I L++ + + + LA+ I Y ++R G LID M+ Sbjct: 266 -----KGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQ 320 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 I + ++I AA L + A + EAA A++ A ++A ++ +E Sbjct: 321 IGQVRMEIEAARLLVYNAARMKENGLPFVREAAMAKLFA-------SQVATTATSKCVEW 373 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 +GG G+ +E + + YR+S +I G+ N + + L++ Sbjct: 374 LGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 414 >gi|332969068|gb|EGK08107.1| acyl-CoA dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 395 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/257 (21%), Positives = 116/257 (45%), Gaps = 16/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + DG Y L+G K W + P +D ++ A+ +G + Sbjct: 128 LAMSEPGAGSDVTSMKLRAEA-KDGGYVLNGSKMWITNGPDADVMVVYAKTNPELGPKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T E+ F+N F + + N+ G +++L+ Sbjct: 187 TAFLVEKGMEGFGTAQKLDKLGMRGSHTGEMTFNNVF---VPEENIMGGLNNGVQVLMSG 243 Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + A+++ V M+ + I Y R G + + +++ +AD+ + A + Sbjct: 244 LDYERAVLAAGPVGIMQAVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTILQAGRSF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + D R A ++R + WC + A + E ++ GG+GY E Sbjct: 304 LYTVGKNLDLLDQRG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRFWRDAKLYEIGAGT 378 >gi|298484981|ref|ZP_07003079.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160535|gb|EFI01558.1| Acyl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 600 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 145/343 (42%), Gaps = 66/343 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------A 247 + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + + Sbjct: 162 MALTEPHAGSSLSDIRTRAEPAEDGTYRLRGNKIFISGGDHALSENIVHMVLAKLPDAPG 221 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V+G + F+VP+ L +DGS N + L +K+G + + L F + G+L+ Sbjct: 222 GVKG-ISLFIVPKFLVNDDGSLGKHNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLV 280 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ--- 352 G L+ + + +I + L + ++ SG SL YAR R G L D Sbjct: 281 GKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--PQGRLPDSKSP 334 Query: 353 ---PV-------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IM 396 PV ++R + + A L + FD+ ++ E A ++ Sbjct: 335 ESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGEAEDARKHAHELLDLL 394 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 P+ K W + A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 395 TPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLG 454 Query: 457 LLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG 499 L Q+ G+ K+++ ++ D+ C+ +G Sbjct: 455 -------------RKLAQNGGTGLKQLLRLISDT---CERAQG 481 >gi|289669926|ref|ZP_06491001.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 387 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 138/311 (44%), Gaps = 43/311 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + PK+ S E+ +G L ++E G+D+ ++ + D Sbjct: 108 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G K W + P +D ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 153 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 211 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL F+ N G L G + V ++ ++++ + + M V L Sbjct: 212 SNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + + A A + +A + D ++ ++AA A + Sbjct: 269 -YVHERKQFGEPIGSFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 327 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A W + +A++ +GG+GYI + R +R++ I G+G + + +L Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377 Query: 457 LLEKGTNLFEQ 467 G LFE+ Sbjct: 378 ---IGRELFER 385 >gi|238505142|ref|XP_002383800.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus NRRL3357] gi|220689914|gb|EED46264.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus flavus NRRL3357] Length = 430 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 27/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +++ DG Y L+G K W + Sbjct: 143 NGSPEQKERFLPGLLSGDKIGALAMSEHSAGSDVVSMKTTAKEV-DGGYVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E + G + + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPQKGSKGITAFVVEKTFAGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG++N +K+L+ L+ ++S M+ +L + Y R G Sbjct: 262 PKENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGT 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ + A+ A ++ A D + S SE + + A Y + Sbjct: 316 PIAHNQLIQGKLADMYTKLQASRAYTYSTARHIDNSASLSEVSIRTQDCAGAILY-AAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECALDAIQLMGGNGYINELPAGRLLRDAKLYEIGAGT 413 >gi|158318151|ref|YP_001510659.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158113556|gb|ABW15753.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 381 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 33/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVGCF 256 L+E G+D AA+ DG Y L+G K W +D + + A+ G + CF Sbjct: 127 LSEAHAGSDPAAMRVTATATDDG-YLLNGTKAWVTHGGAADFYTVFARTSSDTRGGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 LV + G+PN + + + K+G ++ T ++ F + L+G + + + Sbjct: 186 LV----DAGTPN-IRFHPPEKKMGLTASPTTQISFDDVAVPASRLIGKVG------QGLS 234 Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L LDS + ++ V L + A+ YA+ R G +ID + +AD+A + Sbjct: 235 IALSALDSGRLGIAATAVGLGQRALDDAVAYAKEREAFGKAIIDHQGLGFLLADMAAAVE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A A + A D A+ A+++A A V +A++ +GG+GY ++ Sbjct: 295 SARATTLAAARRRDAGLQYGRAASVAKLVA-------TDAAMKVTEDAVQVLGGAGYTKD 347 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + R+ RE+ I G+ L + L +G Sbjct: 348 FPVERYMREAKVMQIFEGTNQIQRLVISRHLARG 381 >gi|145548916|ref|XP_001460138.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124427966|emb|CAK92741.1| unnamed protein product [Paramecium tetraurelia] Length = 397 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 16/253 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ S +K+ D Y L+G K W + P+SD I+ A+ E + Sbjct: 141 LAMSEPNAGSDVVSMKSTAKKVGDK-YILNGSKMWITNGPISDILIVYAKTEPEKKQHGI 199 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + + G + +KIG + + T + F N +LG++N G M L Sbjct: 200 TAFIVEANMKGFSKGKKLDKIGMKCSDTGPIYFDNVEIPAENVLGEVN--QGVYVLMSGL 257 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 Y L A V M+ + + Y R G + +M++ +A++ + A+ A+ Sbjct: 258 DYERLVLAAGPVGLMQAAFDISRDYCNTREQFGKKIGQFQMMQQKLAEMYTTLQASRAML 317 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A + D+ + + A A I Y+ A V EA++C+GG+GY +E + R Sbjct: 318 YSVARAVDQGNITNTDCA-ALI------YYTSANATQVGLEAIQCLGGNGYTKEYPVGRI 370 Query: 434 YRESPANSILLGS 446 +S I G+ Sbjct: 371 MLDSKLYEIAAGT 383 >gi|153206796|ref|ZP_01945637.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177'] gi|212218459|ref|YP_002305246.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154] gi|120577159|gb|EAX33783.1| acyl-CoA dehydrogenase [Coxiella burnetii 'MSU Goat Q177'] gi|212012721|gb|ACJ20101.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuK_Q154] Length = 387 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ D I+ L+G K W + P +D I+ A+ + G + Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E P Q+L +K+G R + T EL F + +LG+LN + M Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L Y L + M+ L + Y R + + +++ IAD+ + A+ A Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D K S++AA A + A + A V +A++C+GG+GYI E + R Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 356 FLRDAKLYEIGAGT 369 >gi|312131646|ref|YP_003998986.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella byssophila DSM 17132] gi|311908192|gb|ADQ18633.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella byssophila DSM 17132] Length = 372 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 20/252 (7%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP 259 GLTE G+D + + +K D Y L+G K F++ + SD +++A R G + Sbjct: 122 GLTETFSGSDAGGMRTVAEKDGD-YYVLNGSKNFITHAISSDVAVVIA----RTGKEMSA 176 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++E G+P G + +NK+G R++ T L F N + D + + L LD Sbjct: 177 FIIEKGTP-GFSAGKKENKLGMRASETACLFFDNC--RVHKDQRIGDEGTGFKQALQLLD 233 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 +S++ + + +A A+ YA+ R G + D + +A++A I AA L Sbjct: 234 GGRISIAALSLGIARGAYECALKYAKEREQFGKPIFDFQAISFKLAEMATKIEAAELLCR 293 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A+ D +A + K + + A V E+++ GG GY ++ + + Sbjct: 294 QAAHFKDNGGGNVSKA------GAMAKLFASETAVEVATESVQIHGGYGYTKDYPAEKFF 347 Query: 435 RESPANSILLGS 446 R+S +I G+ Sbjct: 348 RDSKLCTIGEGT 359 >gi|293611198|ref|ZP_06693496.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826449|gb|EFF84816.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 375 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGNNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|228994061|ref|ZP_04153962.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228765709|gb|EEM14362.1| Acyl-CoA dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 381 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ +D +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKQGDH-YVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V PVE++ Sbjct: 188 FIVEKDTPGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA + YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKICEIYEGT 369 >gi|15616360|ref|NP_244665.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125] gi|10176423|dbj|BAB07517.1| acyl-CoA dehydrogenase [Bacillus halodurans C-125] Length = 380 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 18/276 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D A + + D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAANMKTTAVLEGDD-YILNGSKIFITNGGIADIYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 E V + + G + + K+G RS+ T E+ F + + N+ Sbjct: 172 TEPEKRHKGVSAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDC---RVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI ++ LD ++ V +A+ A+ YA R G + Q + +AD+ Sbjct: 229 GDGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVAYANERKQFGKPIGQQQGIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A+ L+++ A E S +E+A +++ A T A V EA++ GG Sbjct: 289 ATKVEASRLLTYQAAWRESEGLSYGKESAMSKLFAGDT-------AMDVTVEAVQVFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GY +E + R+ R++ I G+ L + +L Sbjct: 342 GYTKEYPVERYMRDAKITQIYEGTNEIQRLVISKML 377 >gi|88859250|ref|ZP_01133890.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata D2] gi|88818267|gb|EAR28082.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas tunicata D2] Length = 385 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 26/264 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A++ ++ +K D Y L+G K F+S + ++ +++A+ G + F Sbjct: 124 LTEPGSGSDAASLKTKAEKQGDN-YVLNGSKMFISGAGETEVLVVMARTGGEGAAGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP G+ Y + + K+G + T + F N ++ N+ E K + Sbjct: 183 VVP-----ADAKGVIYGKAEEKMGWNAQPTRLITFENV---IISQDNLLGQEGEGFKFAM 234 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ + +L A +Y + R G L ++ +AD+ ++ AA Sbjct: 235 QGLDGGRINIATCSIGTAQQALNTAKNYMQEREQFGKPLAAFQALQFKLADMNTELVAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + RLA +F ++ E+ AY + K + + V +A++ GG GYI+E + Sbjct: 295 HM-VRLA-AFKLDQNDPEKTAYC----AMAKRFATDVGFKVCDDALQIHGGYGYIKEYPL 348 Query: 431 ARHYRESPANSILLGSGNAMVLDV 454 RH R+ + IL G+ M L V Sbjct: 349 ERHVRDVRVHQILEGTNEIMRLIV 372 >gi|331697784|ref|YP_004334023.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952473|gb|AEA26170.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 600 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 53/303 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 L+E + G+ ++ +T++ + DG Y L+G K ++S +S+ + +LA+V G Sbjct: 166 LSEPQAGSSLSDVTTRAEPQPDGTYRLTGTKMWISGGDHELSENIVHLVLARVPGSPPGV 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEF----------SNTF 295 + F+VPR L DGS N + L +K+G R L F + Sbjct: 226 KGISLFVVPRFLVAPDGSIGERNDVVLAGLNHKMGYRGTVNTLLNFGEGRHTPGGRAGAV 285 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILI 350 G+L+G+ N + M ++ A + V +L A+ YAR R + Sbjct: 286 GYLVGEQNRGLAQMFHM-----MNEARVGVGAGATALGYAGYLHALDYARSRPQGRPVAA 340 Query: 351 DQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----- 394 P +KR + + A AL A DE ++ + A R Sbjct: 341 KDPAAPQVPIIAHADVKRMLLASKSYVEGALALVLYCARLLDEEQTADDPADRERAHLLL 400 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++ P+ K W + A A++ GG GY E + + YR++ N+I G+ +D Sbjct: 401 EMLTPVAKSWPAQWCLAANDLAIQVHGGYGYTREYDVEQLYRDNRLNAIHEGTHGIQAID 460 Query: 454 VLN 456 +L Sbjct: 461 LLG 463 >gi|306840952|ref|ZP_07473693.1| acyl-CoA dehydrogenase [Brucella sp. BO2] gi|306289009|gb|EFM60274.1| acyl-CoA dehydrogenase [Brucella sp. BO2] Length = 460 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 200 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 258 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 259 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 312 Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 313 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 372 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 373 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 425 Query: 430 IARHYRE 436 I R YR+ Sbjct: 426 IERFYRD 432 >gi|157104649|ref|XP_001648505.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108880278|gb|EAT44503.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 404 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ +++ ++ A + + Sbjct: 144 FALSEPGNGSDAGAASTVAVLKGD-RWVLNGTKCWITNAYEAESAVVFATTDKSLKHKGI 202 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VPR +G + ++K+G R ++T +L F + + N+ P K Sbjct: 203 SAFIVPR-----GASGFTLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGFGFK 254 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++ + +A+A + YA +R G + +++ IAD++L++ Sbjct: 255 IAMQTLDAGRIGIASQALGIAQASLECAVDYANKRIAFGKPISKLQAIQQKIADMSLNLE 314 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++EAA A++ A +C + ++ +GG GY+ + Sbjct: 315 SARLLTWRAAWLKDNKKPYTKEAAMAKLAASEAATFCSH-------QCIQVLGGMGYVSD 367 Query: 428 RSIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 368 MPAERHYRDARITEIYEGT 386 >gi|120406664|ref|YP_956493.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959482|gb|ABM16487.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 464 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/332 (22%), Positives = 141/332 (42%), Gaps = 58/332 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P WAP+ F D ++ ++AI +E GG+D+ + + + Sbjct: 96 SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145 Query: 220 KI---SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270 + +D + + GHK W + ++D ++ A V+ +G F+VP G+P GL Sbjct: 146 RAGPGADADWIIDGHKMWIGNGGIADVHVVNAVVDQELGHKGQALFIVP----GGTP-GL 200 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306 R +K+G R++ T EL+ + LLG + + Sbjct: 201 DMVRKLDKLGCRASHTAELKLTGVRVPADHLLGGQEKLDHKLARAREAIEGARHSGSATL 260 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G E + ++ A ++ R +L YA RR G +ID + +AD+A + Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGAPIIDNQGISFPLADLATGL 316 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++R S+ A + R ++K ++A A++ +GG GY++ Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAVQTMGGWGYVK 370 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + + + YR++ +I G+ + + N L Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRMVISNAL 402 >gi|212212590|ref|YP_002303526.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212] gi|212011000|gb|ACJ18381.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii CbuG_Q212] Length = 387 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ D I+ L+G K W + P +D I+ A+ + G + Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E P Q+L +K+G R + T EL F + +LG+LN + M Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L Y L + M+ L + Y R + + +++ IAD+ + A+ A Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D K S++AA A + A + A V +A++C+GG+GYI E + R Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVAIQAIQCLGGNGYITEFPVER 355 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 356 FLRDAKLYEIGAGT 369 >gi|209548161|ref|YP_002280078.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533917|gb|ACI53852.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 592 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 96/430 (22%), Positives = 186/430 (43%), Gaps = 69/430 (16%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 +E+A +A+ Q A GGE V W L R I G + +F + Sbjct: 49 EEVAPLADIGDRQ-GARLEGGE----VRLPDGWRDLYRSWIAGGWNGLTAPEAFGG--QA 101 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNK 188 H + A L + ++P++T ++ A+ T + + + + K+ S E+ T Sbjct: 102 LPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGT-- 159 Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----F 243 + LTE G+D+ + ++ ++ +DG Y + G K F++ DA Sbjct: 160 -----------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIH 208 Query: 244 IMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 ++LA++ + FLVP+ L +DGS N L L++K+G + T + + Sbjct: 209 LVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGIHGSPTCTMIYG 268 Query: 293 N--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA 339 + G+L+G+ N + M +++A ++V V++AEA + YA Sbjct: 269 DGRFGDEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKAVAYA 323 Query: 340 RRRHV------SG-GI--LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 + R SG G+ +++ P + R + + A A+S+ A++ D + + + Sbjct: 324 KERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHAIDMSHRAGDVS 383 Query: 391 AY----ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A ++ PI K + V + ++ GG G+IEE AR+ R++ I G+ Sbjct: 384 RHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGT 443 Query: 447 GNAMVLDVLN 456 +D++ Sbjct: 444 NGIQAIDLVT 453 >gi|172059771|ref|YP_001807423.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171992288|gb|ACB63207.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 395 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D + ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSLSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEEDGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 LL +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C + Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|221067817|ref|ZP_03543922.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220712840|gb|EED68208.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 384 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 31/312 (9%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 + S +A + TP + W PK+ S E + G+ +TE G+D Sbjct: 91 ITSVHTITAHYLDTYGTPEQKQRWLPKLCSGE-------------LLAGIAMTEPSVGSD 137 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNG 269 + A+ ++ Q+ D Y ++G K F+++ + +++A G G V + LE + G Sbjct: 138 LKAMRTRAQRDGDH-YVINGSKTFITNGCTANLLVVAVRTGEAGSAGVSLVVLETENLPG 196 Query: 270 LCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 R KIG + T EL F + LLG + G + M L Y + ++ VS Sbjct: 197 FRVGRRLGKIGQHISDTAELFFEDLNIPASHLLGGIE-GQGFKQLMSQLPY-ERMLLGVS 254 Query: 327 GMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 + Y ++R G + D + +A+ A A SF ++ Sbjct: 255 AAAAIEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSF-----VNDC 307 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 R + A + K+WC + V+ E ++ GG GY+EE I R Y ++ I Sbjct: 308 IQRLLDGTLENEAAYMAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIGRMYADARIQKI- 366 Query: 444 LGSGNAMVLDVL 455 G N ++ D++ Sbjct: 367 YGGANEIMKDLI 378 >gi|229074975|ref|ZP_04207980.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] gi|228708148|gb|EEL60316.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] Length = 569 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 42/328 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A D+A S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEKGTNLFEQLFST-LEQDLGS 478 L V +L K EQ+ +T +E D+ + Sbjct: 403 LTVAKMLMKQ---IEQIEATEVEIDIAT 427 >gi|262196959|ref|YP_003268168.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262080306|gb|ACY16275.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 386 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 40/317 (12%) Query: 143 MAQLEAGHLMSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 +A+ +A ++ SVT+ A++VA + + K P++ Y V Sbjct: 76 LARADASVAVAVSVTNMVAALVAQVGSEAQRKQHVPRLVDGSY------------VCGAF 123 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E + G+D +A+ + + G +W + ++ A + G Sbjct: 124 ALSEPQAGSDPSAMRTSATRTGSGWRLRGSKQWITGGDRAGVMVVWAVTDAEAGNRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G GL R ++K+G + TV L F + +G+ + E K+ Sbjct: 184 FLVP-----GGAAGLSVSRSEDKMGLHGSTTVGLSFDDVE---VGEDALLGREGEGFKLA 235 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ LD + +S + +AE A+ YA R G + + + +AD A + AA Sbjct: 236 MMALDGGRIGISSQAIGIAEGALDAAVAYACERVQFGKPIGQHQGVSQMLADAATWLDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+ R A DE K S+EA+ A++ + C + A++ GG GY + Sbjct: 296 KLLTLRAAARKDEGKPFSQEASMAKLFSTEHAGRICDI-------ALQVHGGYGYTRDFP 348 Query: 430 IARHYRESPANSILLGS 446 + R YR+ I G+ Sbjct: 349 VERAYRDVRVTRIYEGT 365 >gi|169794773|ref|YP_001712566.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|184159454|ref|YP_001847793.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213157899|ref|YP_002320697.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215482317|ref|YP_002324499.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|239501701|ref|ZP_04661011.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB900] gi|301347102|ref|ZP_07227843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB056] gi|301510411|ref|ZP_07235648.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB058] gi|301597306|ref|ZP_07242314.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB059] gi|332852224|ref|ZP_08434029.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332870446|ref|ZP_08439210.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332876296|ref|ZP_08444071.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|169147700|emb|CAM85563.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|183211048|gb|ACC58446.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|193078319|gb|ABO13293.2| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978] gi|213057059|gb|ACJ41961.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213986221|gb|ACJ56520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|322509368|gb|ADX04822.1| acdA [Acinetobacter baumannii 1656-2] gi|323519392|gb|ADX93773.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332729354|gb|EGJ60694.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332732183|gb|EGJ63451.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332735568|gb|EGJ66620.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 593 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 51/392 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365 I + + A YA R + IL+ V +R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509 + ++D ++ E + + +F+ E+ A Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508 >gi|89902601|ref|YP_525072.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89347338|gb|ABD71541.1| isovaleryl-CoA dehydrogenase [Rhodoferax ferrireducens T118] Length = 392 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 21/276 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +T + + G Y L+G K W + P +D ++ A+ + +G V Sbjct: 128 LAMSESGAGSDVLGMTLKAED-KGGFYLLNGSKMWITNGPDADTLVVYAKSDPELGARGV 186 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E G P Q+L +K+G R + T EL F+N +LG LN G M Sbjct: 187 SAFLIEKGMPGFSVAQKL-DKLGMRGSHTGELVFNNVEVPAQNILGGLN--NGAKVLMSG 243 Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L Y + A+++ + M+ + + Y R G + + +++ +AD+ + A A Sbjct: 244 LDY-ERAVLTGGPLGIMQAVMDNVMPYIHDRKQFGQSIGEFQLIQGKVADLYTVLQAGRA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ +A + D +E R W + A + E ++ GG+GYI E + Sbjct: 303 FAYTVAKNLDLLG--AEHVRQVRKDCASVILWTAEKATWMAGEGVQIFGGNGYINEYPLG 360 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LF Q Sbjct: 361 RLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390 >gi|190895532|ref|YP_001985824.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652] gi|190699477|gb|ACE93561.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CIAT 652] Length = 395 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++ ++ +K+ DG Y L+G K W ++P++D F++ A+ E G + F Sbjct: 138 FGLTEPDHGSDPGSMATRARKV-DGGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGF- 195 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +LE G GL + K+G R++ T E+ F + + N+ G Sbjct: 196 ---ILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTC 248 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+SA ++ + AE A Y R G L ++++ +AD+A +I+ Sbjct: 249 LNSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQG 308 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 RL +E E + I K C A + A + +GG+G +E IAR Sbjct: 309 CLRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIAR 361 Query: 433 H 433 H Sbjct: 362 H 362 >gi|83646653|ref|YP_435088.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83634696|gb|ABC30663.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 389 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 39/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + + PK+ S E+ IG L ++E G+D+ ++ Q K D Sbjct: 110 TPEQRQKYLPKLISGEH--------------IGALAMSEPNAGSDVVSMKLQAVKKGDK- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P + +++ A+ + + G + + + G +K+G R + Sbjct: 155 YVLNGAKMWITNGPDAHTYVIYAKTDVQAGPRGITAFIVERDYPGFSRSPKLDKLGMRGS 214 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDS-----AIMSVSGMRVSLAEAIHY 338 T EL F N + + N+ G + +K+L+ LD A + M+ + + Y Sbjct: 215 NTCELVFDNC---EVPEENILGGLNQGVKVLMSGLDYERVVLAAGPIGIMQACMDAVVPY 271 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + +++ +AD+ + A A + +A + D ++ ++AA + Sbjct: 272 IHEREQFGQPIGQFQLIQGKVADMYTTLNACRAYLYAVAAACDRGETTRKDAAGVIL--- 328 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 +C + A + +A++ +GG+GYI E S R R++ I G+G + + +L Sbjct: 329 ----YCAEKATQMALDAIQILGGNGYINEFSTGRLLRDAKLYEI--GAGTSEIRRML--- 379 Query: 459 EKGTNLFEQ 467 G LFE+ Sbjct: 380 -IGRELFEE 387 >gi|294667775|ref|ZP_06732985.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602401|gb|EFF45842.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 387 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D Y L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RYVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI + Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|52082252|ref|YP_081043.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52787644|ref|YP_093473.1| MmgC [Bacillus licheniformis ATCC 14580] gi|52005463|gb|AAU25405.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52350146|gb|AAU42780.1| MmgC [Bacillus licheniformis ATCC 14580] Length = 376 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 40/263 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGC 255 LTE G+D ++ ++ +K D Y L+G K F+++ +D +++ A + G + Sbjct: 124 LTEPSAGSDAGSLKTRAEKRGD-TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303 F+V E G+P G + + K+G + TV L F N GF + N Sbjct: 183 FIV----EKGTP-GFFIGKNEEKMGLHGSLTVTLNFDNAVIPARQLLGEEGMGFKMALSN 237 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + TG + A ++ +L+EA+ + ++R+ G + + + +AD+A Sbjct: 238 LDTGRI---------GIAAQALGIAEGALSEAVQFLKKRYPDGELYKNGQALAFKLADMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA L ++ A+ + + A+ A++ A T + V EA++ +G G Sbjct: 289 ARTEAARLLVYQAASLKQQGMQTGKAASMAKLFASETAMY-------VAGEAVQLLGDFG 341 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y ++ S R++R++ I G+ Sbjct: 342 YTKDFSAERYFRDAKVCEIYEGT 364 >gi|323524561|ref|YP_004226714.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323381563|gb|ADX53654.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 376 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE + G+D +A+ + + D Y L+G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNAQVAIVMAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+VP +G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DSSGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAAALKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|164660180|ref|XP_001731213.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966] gi|159105113|gb|EDP43999.1| hypothetical protein MGL_1396 [Malassezia globosa CBS 7966] Length = 446 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 45/284 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ + +K DG Y ++G K W +S ++ FI+ AQ + G Sbjct: 187 LSEPNSGSDAFAMKTTVKKSDDGSHYIINGSKMWITNSAEAEFFIVFAQGDASKGYKGIS 246 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F V + + G+ + ++K+G R+++T + F ++ V P E++ Sbjct: 247 AFAVEKDM------GVEIAKKESKLGIRASSTCTVNFD--------EVKV---PAENLIG 289 Query: 313 ------KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 KI I L+ + + V LA+ A+ Y R G + M+ +A Sbjct: 290 EEGKGYKIAIEILNEGRVGIGAQMVGLAQGAFDRALAYTFERQQFGKPIAKFQGMQFQMA 349 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 IA +I AA + + A +E + +++AA A++ + + A A+E G Sbjct: 350 QIATEIEAARLMVYNAARLKEEGRPFTKQAAMAKL-------YSSQAAERAAGRAIEWCG 402 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G G+ E+ I +++R+S +I G+ N + + NL K L Sbjct: 403 GQGFTREQGIEKYWRDSKIGAIYEGTSNIQLNTIFNLTAKEQGL 446 >gi|260548810|ref|ZP_05823032.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] gi|260407978|gb|EEX01449.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] Length = 593 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 51/392 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 178 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 KEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365 I + + A YA R + IL+ V +R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 356 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 416 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA 509 + ++D ++ E + + +F+ E+ A Sbjct: 477 DLDTDLNFIKDATLDAATEIEAITQFIIEQAA 508 >gi|171057535|ref|YP_001789884.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170774980|gb|ACB33119.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 386 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 26/253 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251 + LTE G+D A+ ++G + DG Y L G K ++++ + AF ++A+ +G Sbjct: 120 VSFALTEPDAGSDAGALKTRG--VIDGDDYLLDGTKRYITNATRAGAFTLMARTDGPGTA 177 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310 + F+VP GL + K+G R T ++ N + N+ G P Sbjct: 178 GISAFIVP-----ADAAGLSLGKPDKKMGQRGTKTCDVNLDNV---RVPAANIIGGVPGR 229 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 K + LD + VS + +A E+I YA++R G + D +++ +AD Sbjct: 230 GFKTAMKVLDRGRLHVSALACGMAQRILQESIAYAQQRRQFGQRIGDFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ A A+ A +DE A R++ + A TK + +M V ++ GG+G Sbjct: 290 ELLAGWAMVQATARRYDERAAGRTDPDVG--MQASCTKLFTTEMVGRVADRGVQIHGGAG 347 Query: 424 YIEERSIARHYRE 436 YI E + R YR+ Sbjct: 348 YINEYKVERFYRD 360 >gi|154706589|ref|YP_001424445.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111] gi|154355875|gb|ABS77337.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii Dugway 5J108-111] Length = 387 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ D I+ L+G K W + P +D I+ A+ + G + Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E P Q+L +K+G R + T EL F + +LG+LN + M Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L Y L + M+ L + Y R + + +++ IAD+ + A+ A Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D K S++AA A + A + A V +A++C+GG+GYI E + R Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 356 FLRDAKLYEIGAGT 369 >gi|300784791|ref|YP_003765082.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299794305|gb|ADJ44680.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 382 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 15/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF-LV 258 L +TE GG+D+A I + + D Y ++G K F++S F+ G G L Sbjct: 125 LAVTEPDGGSDVAGIRTTAVREGDE-YVINGAKTFITSGCRADFVTTVVRTGGDGAHGLS 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 ++E G+P G R K+G + T EL + + L+G N V + Sbjct: 184 LIVVERGTP-GFTVSRKLEKMGWLCSDTAELSYVDVRVPVEHLVGAENSGFAQVATQFVT 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ + + + +L + + R R G LI + V++ + ++A I A + + Sbjct: 243 ERLSLAVQAYAHAQRALDLTLDWCRLRETFGRPLISRQVVQHKLTEMARKIDVARTYTRQ 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + EA +A+ A W V++EA++ GG GY+ E + RHYR Sbjct: 303 AAIRHVSGEEVIAEACFAKNTAVEAAEW-------VVSEAVQLHGGLGYMRESEVERHYR 355 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 356 D--VRILGIGGGTTEILTGL 373 >gi|262371617|ref|ZP_06064896.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] gi|262311642|gb|EEY92727.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] Length = 390 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG 201 L+A +E S V + M+ + TP +H P+I E P A + +++AI Sbjct: 77 LLAAIEMAKAASGGVHISLMIHSIGTPPIHHFARPEI-RDEVMPQIIAGEKISALAI--- 132 Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259 TE GG+D+AA+ ++ + D Y +SG K F++S + +D + + + + G + Sbjct: 133 -TEPSGGSDVAALKTKAVRDGD-YYIVSGEKTFITSGIRADYYTVAVRTDPNGQGPKGIS 190 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL D G+ LK K+G ++ T L F LLG N + + + Sbjct: 191 MLLMDAHSEGITKSPLK-KMGWWASDTAHLHFDEVRVPVSHLLGQENAGFKVIMNNFNME 249 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL---- 372 ++ V EA+ +A++R G LID V++ + D+A + A AL Sbjct: 250 RFWLGAIAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTATRALLEDT 309 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R+ + + + + +A T +C A++ +GG G++ R Sbjct: 310 AYRMGKKELQGSELIAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGMKSER 362 Query: 433 HYRESPANSILLGSGNAM 450 YRE N I G+ M Sbjct: 363 IYREVKVNMIGGGAEEIM 380 >gi|270008823|gb|EFA05271.1| hypothetical protein TcasGA2_TC015428 [Tribolium castaneum] Length = 439 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W + S+A ++LA + + Sbjct: 179 FALSEPGNGSDAGAASTTARLDGDQ-WMLNGTKAWITNGFESEAAVVLATTDKSLKHKGI 237 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 +VP+ GL + ++K+G R ++T L F + + N+ P + K Sbjct: 238 SAIIVPK-----PTKGLELGKKEDKLGIRGSSTCSLIFEDC---QVPKANLLGEPGQGFK 289 Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I ++ LD+ + ++ + +A+A YA +R G L+ ++ +A++AL + Sbjct: 290 IAMMTLDAGRIGIASQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLD 349 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L++R A D K+ ++EAA A++ A + A + + ++ +GG GY+ + Sbjct: 350 AARLLTWRAAWLKDNHKNFTKEAAMAKLAA-------SEAATYLSHQCIQILGGMGYVSD 402 Query: 428 RSIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 403 MPAERHYRDARITEIYEGT 421 >gi|326436268|gb|EGD81838.1| long-chain specific acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 436 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 24/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGRVGCF 256 + +TE G+D+ +++ K D + L+G K F+S+ +SDA +++A+ +E + Sbjct: 180 IAMTEPGAGSDLQGVSTTAIKDGDE-WVLNGSKVFISNGQLSDAVVVVAKTDLEAKRAAH 238 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + + D G + +K+G ++ T EL F + LLG LN Sbjct: 239 GLSLFIVDAGTPGFSKGKNLHKMGLKAQDTSELFFEDCRVPESALLGQLNKGF-----YH 293 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ L + + M V+ AEA + Y R G L + ++ +A++ DIA Sbjct: 294 LMTELPQERLLLGVMAVAHAEACYEWTREYINERKAFSGTLANLQTVRHKMAELKTDIAV 353 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + + E + +E MA + KYWC + V ++ GG GY+ E Sbjct: 354 CRAFADQCILLHSEGRLNTE-------MASMVKYWCTDLESRVADACVQLHGGYGYMWEY 406 Query: 429 SIARHYRESPANSILLGSGNAM 450 + R Y ++ I G+ M Sbjct: 407 PVCRAYVDARVQRIYGGANEIM 428 >gi|260425978|ref|ZP_05779957.1| acyl-CoA dehydrogenase [Citreicella sp. SE45] gi|260420470|gb|EEX13721.1| acyl-CoA dehydrogenase [Citreicella sp. SE45] Length = 375 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 30/261 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254 G LTE G+D +AI ++ + D Y L+G K F++S + D I A + G Sbjct: 120 GFALTEPHTGSDASAIRTKAVRDGDH-YVLNGSKQFITSGKNGDVIITFAVTDPTAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305 F+VP G ++ K+G S+ T L F+ N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMAVERKLGQHSSDTCALAFNEMRLPAENLLGAEGEGYRIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR RH G +++Q + +AD+A Sbjct: 234 LSNLEGGRIGI----ASQAVGMARAAFEAARDYARDRHAFGKPILEQQAVAFKLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA + A + + EA+ A++MA +MA V + A++ GG GY+ Sbjct: 290 IEAARQMVLHAAALREAGRPCLTEASMAKLMA-------SEMAEEVCSGAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGS 446 + + R YR+ I G+ Sbjct: 343 ADYPVERIYRDVRVCQIYEGT 363 >gi|150002926|ref|YP_001297670.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482] gi|254884707|ref|ZP_05257417.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA] gi|294775842|ref|ZP_06741342.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides vulgatus PC510] gi|319642377|ref|ZP_07997031.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A] gi|149931350|gb|ABR38048.1| acyl-CoA dehydrogenase [Bacteroides vulgatus ATCC 8482] gi|254837500|gb|EET17809.1| acyl-CoA dehydrogenase [Bacteroides sp. 4_3_47FAA] gi|294450302|gb|EFG18802.1| acyl-CoA dehydrogenase, C-terminal domain protein [Bacteroides vulgatus PC510] gi|317385992|gb|EFV66917.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_40A] Length = 568 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P++K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|116250739|ref|YP_766577.1| Acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115255387|emb|CAK06462.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 592 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 99/446 (22%), Positives = 182/446 (40%), Gaps = 73/446 (16%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L G G D +V W L R I G + Sbjct: 31 LGEDLVDAILAEAGRFATEEVAPLAEIGDRQGARLIDGEVRLPDGWRDLYRHWIAGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASM--VALMTTPRVHKDWA 175 +F + A ++ + G ++P++T ++ V + + + Sbjct: 91 LTAPEAFGGQALPHMLNVAALEMWNSGSMAFG--LAPTLTMGAIEAVGAHGSAALKDKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE G+D+ + ++ ++ DG Y L G K F+ Sbjct: 149 EKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRDDGSYRLFGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DGS N L L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGPRNDLFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + + + G+L+G+ N + M +++A ++V V+ Sbjct: 256 GIHGSPTCTMIYGDGKFGGEKGAVGWLVGEENKGLACMFTM-----MNNARLAVGMQGVA 310 Query: 332 LAEA-----IHYARRR-------HVSGGI--LIDQPVMKRAIADIALDIAAATALSFRLA 377 +AEA + YAR R S G+ +++ P + R + + A A+S+ A Sbjct: 311 IAEAATQKALAYARERTQGRAPGSSSAGMSPIVEHPDVARMLLTMKALTQGARAISYACA 370 Query: 378 NSFDEA-------KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ D + + E AA ++ PI K + V + ++ GG G+IEE Sbjct: 371 HAIDMSHRAGDISRQWQERAA---LLTPIAKSFSTDSGVDVASLGIQVHGGMGFIEETGA 427 Query: 431 ARHYRESPANSILLGSGNAMVLDVLN 456 AR+ R++ I G+ +D++ Sbjct: 428 ARYLRDARIAPIYEGTNGIQAIDLVT 453 >gi|120599501|ref|YP_964075.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. W3-18-1] gi|146292501|ref|YP_001182925.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella putrefaciens CN-32] gi|120559594|gb|ABM25521.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. W3-18-1] gi|145564191|gb|ABP75126.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens CN-32] gi|319425805|gb|ADV53879.1| acyl-CoA dehydrogenase domain protein [Shewanella putrefaciens 200] Length = 385 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ Q + + DG Y +SG K F+S + +++ G+ G + Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y + ++K+G + T ++ F N LLG+ G MK L Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + R Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA +F E AY + K + + V A++ GG GYI E + RH+R Sbjct: 299 LA-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|297171976|gb|ADI22961.1| acyl-CoA dehydrogenases [uncultured nuHF2 cluster bacterium HF0500_39O04] Length = 423 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 19/264 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + ++E GG+D+AA+ + K+ YCL+G K W ++ +++ +++ A+ Sbjct: 155 PVAEGKKIAAFAISEPEGGSDVAAMRTTA-KLDGNEYCLNGKKAWISNAGIANYYVLFAR 213 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLN 303 + G + + D G+ N I T+ L+ N G Sbjct: 214 TDDAPGAKGLSAFIVDSDTPGITVSERINVIAPHPLGTLSLKNCRIPTVNILGSSGDGFK 273 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 V+ ++ + + S+ R ++ EAI +++R G + + +++ IAD+A Sbjct: 274 VAMATLDVFRTTV----GAASLGFARRAMDEAIARSKQREAFGKPISEFQLIQEKIADMA 329 Query: 364 LDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 L I A L +R A DE +R + E++ A++ + + A VI +A++ GG Sbjct: 330 LKIDAMALLIYRSAWVKDEKGTRVTRESSMAKL-------YGTEAAQEVIDQAVQIFGGM 382 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G + ++ R YRE A I G+ Sbjct: 383 GVVSGVTVERLYREIRALRIYEGT 406 >gi|320011992|gb|ADW06842.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 390 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--C 255 L+E G+D A++ ++ + DG + L+G K W ++D + +LA+ +G G Sbjct: 133 LSEPSSGSDAASLRTK--AVRDGEDWVLTGTKAWITHGGVADFYTVLARTGEDGPRGITA 190 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP G GL + K+G + + T +L F + GD + L Sbjct: 191 FLVP-----GDAQGLDAALPEKKMGMKGSPTAQLHFDGVR--ISGDRRIGEEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ V +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDSGRLGIAACAVGVAQAALDEAVRYATDRRQFGRPVADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + S +AA A K +C A V +A++ +GG GY + + Sbjct: 304 ALYLEAARLRDAGLAFSRQAAMA-------KLFCTDAAMRVTTDAVQVLGGYGYTLDFPV 356 Query: 431 ARHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 357 ERLMREAKVLQIVEGT 372 >gi|165918615|ref|ZP_02218701.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334] gi|165917743|gb|EDR36347.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 334] Length = 387 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ D I+ L+G K W + P +D I+ A+ + G + Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E P Q+L +K+G R + T EL F + +LG+LN + M Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L Y L + M+ L + Y R + + +++ IAD+ + A+ A Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D K S++AA A + A + A V +A++C+GG+GYI E + R Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 356 FLRDAKLYEIGAGT 369 >gi|78043883|ref|YP_360552.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77995998|gb|ABB14897.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 380 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D++AI + + D + L+G K F+++ ++ + + A V+ G + Sbjct: 125 LTEPEAGSDVSAIKTTARLEGDE-WVLNGTKCFITNGGVASLYTVFATVDRSKGIKGITA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMK 313 L G G+ + + K+G+R++ E+ N G + ++ ++ + Sbjct: 184 FLVPGDTPGIYGGKKEKKMGDRASHVAEVILENVRIPRENVLGEVGSGFKIAMQTLDQTR 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +I +V R +L EA+ YA+ R G + + ++ +AD+A+ I AA AL Sbjct: 244 PMI----GATAVGVARRALDEALKYAKERKQFGRPIAEFQAIQFMLADMAMQIEAARALV 299 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++ D+ ++E A A+ A +A V +A++ +GG GY+ + + + Sbjct: 300 WKACWMLDQGMKATKEGAMAKCFA-------SDVAMRVTVDAVQILGGYGYMRDYPVEKL 352 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 353 MRDAKITQIYEGT 365 >gi|332307811|ref|YP_004435662.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175140|gb|AEE24394.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 385 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 127/311 (40%), Gaps = 51/311 (16%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+A P + W P + + + + LTE G+D AA+ + K Sbjct: 96 MIAKWGKPELKDKWCPDLVTGK-------------LLASYCLTEPGSGSDAAALRTSA-K 141 Query: 221 ISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRL 275 + Y L+G K F+S + +D +++A+ G + FLVP G+ Y + Sbjct: 142 LDGDEYVLNGSKMFISGAGETDVLVVMARTGGEGPKGISAFLVP-----ADAKGVVYGKA 196 Query: 276 KNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYLDSAIM 323 + K+G + T + F N GF + G V + A Sbjct: 197 EEKMGWNAQPTRLITFDNVRISQINLLGEEGQGFSFAMQGLDGGRV---------NIATC 247 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 S+ + +L A Y + R G L ++ +AD+A ++ AA + RLA +F Sbjct: 248 SIGTAQQALNTATAYMQERTQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLD 305 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 SE +AY + K + + V +A++ GG GYI+E + RH R+ + IL Sbjct: 306 NKDSERSAYC----AMAKRFATDVGFEVCNQALQIHGGYGYIQEYPLERHVRDVRVHQIL 361 Query: 444 LGSGNAMVLDV 454 G+ M + V Sbjct: 362 EGTNEIMRMIV 372 >gi|293607052|ref|ZP_06689395.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292814542|gb|EFF73680.1| glutaryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 397 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 GLTE G+D + ++ K SDG Y +SG+K W +SP++D F++ A+ +G++ Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTSDG-YKISGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 F++ D GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 196 RGFIL-----DKGMKGLSAPAIHGKVGLRASITGEIVMDEVEVSEDQMMPGVSGLKGP-- 248 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365 L+SA ++ V AEA H AR+ R G L ++++ +AD+ + Sbjct: 249 ----FTCLNSARYGIAWGAVGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTE 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A RL DE + E + I K C A + A + +GG+G Sbjct: 305 ITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357 Query: 426 EERSIARH 433 +E +ARH Sbjct: 358 DEFGVARH 365 >gi|265754313|ref|ZP_06089502.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA] gi|263235022|gb|EEZ20577.1| acyl-CoA dehydrogenase [Bacteroides sp. 3_1_33FAA] Length = 568 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P++K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|295400654|ref|ZP_06810631.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112656|ref|YP_003990972.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|294977235|gb|EFG52836.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217757|gb|ADP76361.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 379 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D+A++ ++ + D Y L+G K W + ++ +++ A + + Sbjct: 124 GLSEPGAGSDVASMKTRAVRDGD-YYVLNGSKVWITNGGEAEIYVVFAITDPEKRHKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V E G+P G + + K+G RS+ T EL F + + N+ E KI Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A+ AI YA++R G + +Q + +AD+A I A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A + +A A++ A T A V +A++ GG+GY ++ Sbjct: 295 ARLLTYQAAWLETNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R R++ I G+ L + +L + Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|29654289|ref|NP_819981.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493] gi|161830802|ref|YP_001596739.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331] gi|29541556|gb|AAO90495.1| isovaleryl-CoA dehydrogenase [Coxiella burnetii RSA 493] gi|161762669|gb|ABX78311.1| acyl-CoA dehydrogenase [Coxiella burnetii RSA 331] Length = 387 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ D I+ L+G K W + P +D I+ A+ + G + Sbjct: 127 LAMSETEAGSDVVGMRLRAEQKGD-IFILNGTKMWITNGPEADVVIVYAKTDPGAGSRGI 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E P Q+L +K+G R + T EL F + +LG+LN + M Sbjct: 186 TAFLIEKDFPGYRTAQKL-HKLGMRGSDTCELVFDHCEVPKENILGELNKGISVL--MSG 242 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L Y L + M+ L + Y R + + +++ IAD+ + A+ A Sbjct: 243 LDYERLVLGGGPLGLMQACLDTVLPYVHERKQFKKSIGEFQLIQAKIADMYTALNASRAY 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D K S++AA A + A + A V +A++C+GG+GYI E + R Sbjct: 303 LYAIAQSADAGKIHSKDAASALMFA-------AENATQVALQAIQCLGGNGYITEFPVER 355 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 356 FLRDAKLYEIGAGT 369 >gi|212690639|ref|ZP_03298767.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855] gi|237709681|ref|ZP_04540162.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA] gi|237725166|ref|ZP_04555647.1| acyl-CoA dehydrogenase [Bacteroides sp. D4] gi|212666739|gb|EEB27311.1| hypothetical protein BACDOR_00126 [Bacteroides dorei DSM 17855] gi|229436432|gb|EEO46509.1| acyl-CoA dehydrogenase [Bacteroides dorei 5_1_36/D4] gi|229456317|gb|EEO62038.1| acyl-CoA dehydrogenase [Bacteroides sp. 9_1_42FAA] Length = 568 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +ID P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIDFPAVYDMLSIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P++K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKVYAKLADSFTPLSKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|160942851|ref|ZP_02090091.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii M21/2] gi|158445903|gb|EDP22906.1| hypothetical protein FAEPRAM212_00328 [Faecalibacterium prausnitzii M21/2] Length = 637 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A++ + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ ++ G+ Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365 >gi|120613007|ref|YP_972685.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1] gi|120591471|gb|ABM34911.1| isovaleryl-CoA dehydrogenase [Acidovorax citrulli AAC00-1] Length = 395 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G+K W + P +D ++ A+ E +G V Sbjct: 131 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPELGARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F N +LG +N K+L Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVNGGA------KVL 243 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 MSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + E R WC + A + E ++ GG+GYI E Sbjct: 304 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRLWRDAKLYEIGAGT 378 >gi|78045829|ref|YP_362004.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034259|emb|CAJ21904.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 387 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D + L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|225175023|ref|ZP_03729020.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225169663|gb|EEG78460.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 377 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D A++ + + + DG Y L+G K F+++ ++D F++ A V+ G Sbjct: 123 LTEPNAGSDAASVATNAKAV-DGGYVLNGSKCFITNGDVADLFVVFATVDKSKGLKGLTA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308 F+VP+ +G+ + + K+G R+++TV + F N G V+ Sbjct: 182 FVVPK------SDGVSAGKKEIKLGIRASSTVVVNFDNVFVPAENVLGGEGMGFKVAMQT 235 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ + LI +SV R + A+ YA+ R G + + +++ +A++A I A Sbjct: 236 LDTSRPLI----GALSVGVARGAYESAVKYAKERVQFGQPIANFQMIQAMLANMATRIDA 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L +R A+ D+ ++A++A+ A + K + +A V +A++ +GG GY E Sbjct: 292 SRLLVWRAADMVDQ-----KDASFAKESA-MAKMYASDVAMDVTTDAVQILGGYGYSREY 345 Query: 429 SIARHYRESPANSILLGS 446 + ++ R++ I G+ Sbjct: 346 PVEKYMRDAKIMQIYEGT 363 >gi|297198581|ref|ZP_06915978.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197715453|gb|EDY59487.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 384 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 49/304 (16%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA T + W P + S EY +G GLTE G+D + ++ Sbjct: 96 AKTVAAWGTEEQKRHWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLATR 141 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y + G K F+++ +D ++ A+ G FLVP GL Sbjct: 142 AVRDGDD-YVIDGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVPT-----DTPGLT 195 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI----MSVSG 327 + + K+G R AT EL + S E+ K SA+ MSV+ Sbjct: 196 RRTIHGKLGLRGQATAELVLEGV------RVPASAMVGEEGKGFSVAMSALAKGRMSVAA 249 Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ D Sbjct: 250 GCVGIAQAALDAALRYAGEREQFGKPIAGHQLVQELISDIAVDVDAARLLTWRVADLIDR 309 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + + E++ A++ A + A A++ GG GYI+E + R++ ++ Sbjct: 310 GEPFAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTL 362 Query: 443 LLGS 446 G+ Sbjct: 363 YEGT 366 >gi|220928421|ref|YP_002505330.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum H10] gi|219998749|gb|ACL75350.1| acyl-CoA dehydrogenase domain protein [Clostridium cellulolyticum H10] Length = 378 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 25/265 (9%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG-HKWFLSSPMSDAFIMLAQV 249 M K + GLTE G+D +I + D Y L+G KW ++D F++ A+ Sbjct: 113 MSKGHIIGAFGLTEPNVGSDAKSIETTAVLNGD-CYVLNGKKKWITMGQVADVFLIFARC 171 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 E + FLV R +G + +K +G R++ EL + ++G + Sbjct: 172 EDKPTAFLVNR-----DTSGFSTKPIKGLMGARASMVAELIMEDCHIPKENIVGRVGTGL 226 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 V L LD +++ V L EA + Y+R+R G L ++++ + + Sbjct: 227 SHVG----LNSLDYGRYTIAWGCVGLGEACLEESVRYSRKRKQFGQPLRQNQLIQKMVTE 282 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 ++++I AA L D + + KY+ KM V ++A++ G Sbjct: 283 MSVNIKAARLLCLNAGYLKDIGDPDTIMETWN------AKYFAAKMVVKVASDAVQIHGA 336 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G E + R+YR+S N I+ G+ Sbjct: 337 KGCCNEYPVERYYRDSKINEIIEGT 361 >gi|260461926|ref|ZP_05810171.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032173|gb|EEW33439.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 389 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 37/292 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229 K W PK+ + E IG + +TE G+D+ + ++ QK DG Y ++ Sbjct: 118 KKWLPKLATGEL--------------IGAIAMTEPGAGSDLQGVKTRAQK--DGNQYKVN 161 Query: 230 GHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 G K F+++ FI++ +G G L+ ++E G R +KIG ++N Sbjct: 162 GSKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFERGRNLDKIGLKAND 219 Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYAR 340 T EL F++ LLG G ++ M+ L L +++ + +LA I Y + Sbjct: 220 TSELFFNDVRVPTSNLLGH-EEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIDYVK 278 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G +ID + +A++ + +++ +R + A + Sbjct: 279 ERKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVARHINGGLDPVTASMA 331 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 KYW + V+ E ++ GG GY+ E IAR +R++ I G+ M L Sbjct: 332 KYWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 383 >gi|256824680|ref|YP_003148640.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] gi|256688073|gb|ACV05875.1| butyryl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] Length = 394 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 28/273 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG---- 254 G GLTE G+D A+ T + +G + ++G K F+++ +D V R G Sbjct: 125 GFGLTEPDAGSD-ASGTRTKASLENGEWVVNGAKSFITNSGTD-ITSCVTVTARTGTREN 182 Query: 255 ------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +VP G+P G + K+G + T L F N + + N+ G Sbjct: 183 GKPEISAIIVP----SGTP-GFTVEPAYRKLGWHISDTHGLTFENC---RVPESNLLGGV 234 Query: 309 VEDMK-ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 E K L LD +++S + V LA+A YA+ R G + + IAD+ Sbjct: 235 GEGYKQFLKTLDDGRIAISALAVGLAQACLEQTTQYAKTRTAFGKPIGAYQGVSFQIADL 294 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + + AA L+++ A DE ++ + A I K + + A A + GG+ Sbjct: 295 QVMVEAARVLTYKAAWLKDEQEAGRRSMQEVKKAASIAKLYSTEAAVTATRIATQVFGGN 354 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G++EE +AR YR+ A + +G G + V +L Sbjct: 355 GFMEEYPVARFYRD--AKILEIGEGTSEVQRML 385 >gi|28872134|ref|NP_794753.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855388|gb|AAO58448.1| acyl-CoA dehydrogenase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 600 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG A+ YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTALKQLL 469 >gi|326436776|gb|EGD82346.1| short-chain acyl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 401 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W + +DA ++ A + + Sbjct: 141 FALSEPGNGSDAGAASTTARDEGDH-WVLNGTKSWITNGYEADAAVVFATTDKSLKHKGI 199 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP+ E GL + ++K+G R+++T L F + N+ + K Sbjct: 200 SAFLVPKPTE-----GLTLGKKEDKLGIRASSTCNLIFEEC---RIPKENLLGSSGQGFK 251 Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + + +A I YA++R G L ++ +AD+ + Sbjct: 252 IAMATLDGGRIGIAAQALGIGQAAFECAIEYAQQRKSMGRPLSSHQMIAEKLADMGTRLE 311 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L+ + A DE + ++EAA A++ A + A + +A++ +GG G++ + Sbjct: 312 SARLLTHKAAVYKDEGRDFTKEAAMAKLAAS-------EAATFIAHQAIQILGGMGFVTD 364 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 RHYR++ I G+ L + L K Sbjct: 365 MPAERHYRDARITEIYEGTSEIQRLVIAGKLLK 397 >gi|221124478|ref|XP_002165995.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, long chain [Hydra magnipapillata] Length = 387 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGC 255 + ++E G+D+ I S + DG Y L+G K F+++ +D +++A+ G G Sbjct: 124 IAMSEPAAGSDLQGIKSTAIQQPDGSYLLNGSKTFITNGWHADLVVVVAKTNPAAGGKGT 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVED 311 L+ L+E G P QRLK K+G ++ T EL F N L G + G + Sbjct: 184 SLL--LVERGMPGFSVGQRLK-KMGMKAQDTSELFFDNVRVPAENLLGGAAYENKGFICL 240 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M+ L + L AI +VS + ++ + Y + R V G + + +A++ + A Sbjct: 241 MEQLPWERLQIAIGAVSASQAAIDWTVDYVKERKVFGQPVASFQNTRYVLAELQTQVQVA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + + A+ A KYW + V+ E ++ GG GY+ E Sbjct: 301 RVFVDKCCELIGKDQLDTATASMA-------KYWTTDLQCKVMDECVQLFGGYGYMWEYP 353 Query: 430 IARHYRESPANSILLGSGNAM 450 I R Y ++ I G+ M Sbjct: 354 ITRAYADARVQRIYGGTNEIM 374 >gi|218184438|gb|EEC66865.1| hypothetical protein OsI_33363 [Oryza sativa Indica Group] Length = 513 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 249 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 307 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F N +LG +N K+L Sbjct: 308 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPASQVLGQVNGGA------KVL 361 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 362 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 421 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + E R WC + A + E ++ GG+GYI E Sbjct: 422 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 479 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 480 LGRLWRDAKLYEIGAGT 496 >gi|94313946|ref|YP_587155.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93357798|gb|ABF11886.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus metallidurans CH34] Length = 379 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 51/309 (16%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +A + + W PK+ S E + +G+TE G+D+ A+ + Sbjct: 97 APYIARIANEEQKQRWLPKVCSGE-------------AILAIGMTEPGTGSDLKAVRTTA 143 Query: 219 QKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 I DG Y ++G K F+S+ ++ D IM+ + + G V ++ + G R Sbjct: 144 --IRDGDEYVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSLIMVEADREGFRRGRKL 201 Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 K+G + T EL F N F +L+G+L P E + I A+ Sbjct: 202 EKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGEL-----PQERLSI------AV 250 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI-ALDIAAATALSFRLANSFD 381 + + + L I Y + R + D K +ADI A +A + + L+ Sbjct: 251 SAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYLSEHIR 310 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 S E A I K + + + E ++ GG GY+ E +AR + +S Sbjct: 311 RRLSLEE--------AAIAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADSRVTR 362 Query: 442 ILLGSGNAM 450 I G+ M Sbjct: 363 IYGGTSEVM 371 >gi|119774514|ref|YP_927254.1| butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B] gi|119767014|gb|ABL99584.1| Butyryl-CoA dehydrogenase [Shewanella amazonensis SB2B] Length = 385 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 15/268 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++T++ + D Y ++G K F+S + +++ G G + + Sbjct: 124 LTEPGAGSDAASLTTKAVREGDE-YVINGSKMFISGAGATELLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 183 AIPADAEGVIYGKAEDKMGWNAQPTRLITFENVRVPVQNLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L +I Y R G L ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERSIAYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E AY + K + + AV A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDSQDPEATAYC----AMAKRFATDIGFAVCDAALQIHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVLDV-LNLLEKGTN 463 + IL G+ M L + LL++ N Sbjct: 355 VRVHQILEGTNEIMRLIISRRLLDENAN 382 >gi|325124095|gb|ADY83618.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 375 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D AI ++ K D Y L+G K F++S + I++ V Sbjct: 111 PLAQGEMIGAFALTEPHTGSDAGAIKTRAVKDGDD-YILNGAKQFITSGDNAGVIIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G FLVPR G R++ K+G ++ T ++ ++ +LG Sbjct: 170 TDPSAGKKGISAFLVPR-----ETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R +L EA YA+ R G + + + Sbjct: 225 KEGEGLKIALANLEGGRIGI----AAQAVGLARAALEEATRYAKERITFGKPIFEHQTIA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A +A +I AA L A + + EA+ A++ A +M V + A+ Sbjct: 281 FRLASMATEIEAARQLVHYAARLKEAGQPCLNEASMAKLFA-------SEMTERVCSSAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + I R YR++ I G+ + Sbjct: 334 QVFGGYGYLRDFPIERIYRDARICQIYEGTSD 365 >gi|313115923|ref|ZP_07801350.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255] gi|310621687|gb|EFQ05215.1| rubredoxin [Faecalibacterium cf. prausnitzii KLE1255] Length = 637 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A++ + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ ++ G+ Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365 >gi|294627476|ref|ZP_06706059.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598107|gb|EFF42261.1| acyl-CoA dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 387 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D Y L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RYVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI + Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|254819539|ref|ZP_05224540.1| FadE15 [Mycobacterium intracellulare ATCC 13950] Length = 609 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 54/336 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAFEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP L D GS NG+ L++K+G +S+ T EL F T G+L+ Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGSRNGVFVTGLEHKMGIKSSPTCELTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLA---EAIHYARRRHVSGGI---- 348 GD++ +E ++ I + +A +G +LA E + A +S Sbjct: 284 GDVHRGIAQMFTVIEHARMTIGVKAAGTLSTGYLNALAFAKERVQGADLTQMSDKTAPRV 343 Query: 349 -LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMAPIT 400 +I P ++R++ AL A D+A ++ A ++ PI Sbjct: 344 TIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDAVAQRVSGADHDMAHRIDDLLLPIV 403 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 K + A V+ E+++ +GGSG++ + + ++ R+S +S+ G+ LD Sbjct: 404 KGVSSERAYEVLTESLQTLGGSGFLADYPLEQYIRDSKIDSLYEGTTAIQALDF------ 457 Query: 461 GTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F + +D G + + + T + +I C E Sbjct: 458 -------FFRKIVRDRGQALQFLTTQITATIDDCDE 486 >gi|331014532|gb|EGH94588.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 600 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAELADDGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ SG A+ YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYSGYLY----ALDYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESAPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTALKQLL 469 >gi|300311865|ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300074650|gb|ADJ64049.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 386 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 16/255 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + ++ DG Y L+G K F+S S D +++A+ G G V Sbjct: 124 LTEPGSGSDAASLKTTA-RLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGE-GARGVSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 ++ G+ G+ Y + ++K+G S T + F N LLG G + MK L Sbjct: 182 IVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLG--QEGQGFIFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L A Y + R G + D ++ +AD+ ++ AA + Sbjct: 240 GRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRL 299 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D S EA MA K + V EA++ GG GYI E + R++R Sbjct: 300 AATKLDAG---SPEATTYCAMA---KRLATDLGFRVCNEALQLHGGYGYIREYPLERYFR 353 Query: 436 ESPANSILLGSGNAM 450 + + IL G+ M Sbjct: 354 DVRVHQILEGTNEIM 368 >gi|294010955|ref|YP_003544415.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S] gi|292674285|dbj|BAI95803.1| acyl-CoA dehydrogenase [Sphingobium japonicum UT26S] Length = 600 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/338 (22%), Positives = 137/338 (40%), Gaps = 47/338 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----E 250 + LTE GTD+ I ++ DG + ++G K F+S+ D ++LA+ E Sbjct: 163 MNLTEPHCGTDLGLIKTRAVPGPDGSFTITGTKIFISAGEHDLTENIIHLVLAKTPDAPE 222 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F+VP+ L EDGS N + L++K+G N+T + + G+L+G+ N Sbjct: 223 GSRGISLFVVPKFLVNEDGSLGKRNAVSCGSLEHKMGIHGNSTCVMNYDGATGWLVGEEN 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA----- 358 + M L + ++ V+ A YA R + Q ++A Sbjct: 283 KGLAAMFIMMNAARLGVGLQGLAQAEVAYQNAAAYAHERRQGRALTGPQDPQEKADTLFA 342 Query: 359 ---IADIALDIAAAT----------ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 + + ++ A T AL LA+ + R +++ P+ K + Sbjct: 343 HPDVRRMLMEARALTEGLRALMLWGALQVDLAHQAATEEERQAADDLLQLLTPVIKGYGS 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 V A + GG GYI E + ++ R++ I G+ +D++ Sbjct: 403 DKGFDVTVMAQQVFGGHGYIWENGVEQYVRDARIAQIYEGTNGVQGMDLVG--------- 453 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 L + G + + + I+ + ++ K D+ LA F Sbjct: 454 ----RKLPMNGGRALQAFLKIVGEEVAQAKGDEKLAGF 487 >gi|302383508|ref|YP_003819331.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264] gi|302194136|gb|ADL01708.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 389 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 33/288 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ + L ++E G+D+ ++ +Q +K+ D Y Sbjct: 112 TPDQKTRYLPKLISGEHVGS-------------LAMSEAGSGSDVISMRTQARKVGD-RY 157 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 L+G K W ++P +D ++ A+ + G V L + G + +K+G R + Sbjct: 158 VLNGTKFWITNAPSADTLVVYAKSDPEAGSKGVTAFLIEKGMKGFSVSKKLDKMGMRGSD 217 Query: 286 TVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 T EL F N G + G V ++ + ++ A + M+ +L + Y Sbjct: 218 TAELVFEDCEVPEENVMGPVGGGAGVLMSGLDYERAVL----AAGPLGIMQAALDVVLPY 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R R G + +M+ IAD+ + + +A + +A + D + +AA A ++A Sbjct: 274 VRDRKQFGKPIGSFQLMQGKIADMYVALNSARTYVYAVAKACDAGLTTRYDAAGAILLA- 332 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V EA++ +GG+GY ++ + R R++ I G+ Sbjct: 333 ------SENAVKVSLEAVQALGGAGYTKDWPVERLVRDAKLYDIGAGT 374 >gi|126653094|ref|ZP_01725223.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905] gi|126590099|gb|EAZ84224.1| hypothetical protein BB14905_12685 [Bacillus sp. B14905] Length = 594 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 83/364 (22%), Positives = 156/364 (42%), Gaps = 59/364 (16%) Query: 155 SVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 S+T + V + + P V K + PK+ S E + LTE Sbjct: 109 SITHGAHVGIGSLPIVLFGDEDQKKKYLPKLASGE-------------LIAAYALTEPGS 155 Query: 208 GTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLED 264 G+D + A T+ + Y L+G K W ++ +D F++ A+++G + F+V R + Sbjct: 156 GSDALGAKTTAKLNDAGTHYILNGEKQWITNAGFADVFVVYAKIDGDKFTAFIVERAFK- 214 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LD 319 G+ + K+G +S++T L + LLG+ + G V IL Sbjct: 215 ----GVSVGPEEKKMGIKSSSTRTLVLEDAEVPVENLLGE--IGRGHVIAFNILNIGRYK 268 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + ++ G + + A+ Y +R L D + K ++ +A + A+ +L++R Sbjct: 269 LGVGTIGGSKRAFELAVQYTNQRQQFKTKLSDFNLTKEKLSTMASQLYASESLNYRTVGL 328 Query: 380 FDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 F++ S+ EE +++A I K + + + EA++ GG G++ E Sbjct: 329 FEDRLSQLSPEEQKEGKVIAGAIAEYAIECSIAKVFGSETLDYIADEAVQLHGGYGFMAE 388 Query: 428 RSIARHYRESPANSILLGSG--NAMVL----------DVLNLLEKGTNLFEQLFSTLEQD 475 + R YR+S N I G+ N M++ L LL+ NL ++L + +D Sbjct: 389 YEVERIYRDSRINRIFEGTNEINRMIVPGTFMKKALKGELPLLQVAQNLQQELLMLMPED 448 Query: 476 LGSS 479 +G+ Sbjct: 449 IGTE 452 >gi|326336526|ref|ZP_08202696.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691399|gb|EGD33368.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 378 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 51/300 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + W PK+ S E+ IG G+TE G+D + + K D ++ L+G Sbjct: 109 RRWLPKLASGEH--------------IGAWGITEHNTGSDAGGMHTTAIKKGD-MWVLNG 153 Query: 231 HKWFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K F++ +S +++ G G F+V R G + +K+G R++ Sbjct: 154 TKNFITHAISANVVVVIARTGEKGDKHGMTAFVVER-----GTKGFSNGKKISKLGMRAS 208 Query: 285 ATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----A 335 T EL F + L+ D N + G ++ MK+L D +S+ + + A+ A Sbjct: 209 ETAELIFQDC---LIPDENRLGEIGEGFIQAMKVL---DGGRISIGALSLGTAKGAVNAA 262 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I YA+ R G +I + +A+++ +I AA + + A+ + + +++AA A++ Sbjct: 263 IKYAKERTQFGKPIISFQAIGFKLAELSTEIEAAELMLHKAAHLKETHQKVTQQAAMAKL 322 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A C K + EA++ GG GY + + + YR++ +I G G + +L ++ Sbjct: 323 YAS---ELCVKASN----EAIQIHGGYGYTTDYPVEKFYRDAKLCTI--GEGTSEILKLV 373 >gi|196249788|ref|ZP_03148484.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|196210664|gb|EDY05427.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 380 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D+A++ ++ K D Y L+G K W + ++ +++ A + + Sbjct: 124 GLSEPGAGSDVASMKTRAIKDGDH-YVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V E G+P G + + K+G RS+ T EL F + + N+ E KI Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A+ A+ YA++R G + +Q + +AD+A I A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A + +A A++ A T A V +A++ GG+GY ++ Sbjct: 295 ARLLTYQAAWLESNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R R++ I G+ L + +L + Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|169795529|ref|YP_001713322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter baumannii AYE] gi|184158668|ref|YP_001847007.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213158530|ref|YP_002319828.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215483016|ref|YP_002325221.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|301344986|ref|ZP_07225727.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301513238|ref|ZP_07238475.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|301596353|ref|ZP_07241361.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|332874363|ref|ZP_08442274.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] gi|169148456|emb|CAM86322.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter baumannii AYE] gi|183210262|gb|ACC57660.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213057690|gb|ACJ42592.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213986266|gb|ACJ56565.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|322507521|gb|ADX02975.1| Putative acyl-CoA dehydrogenase protein [Acinetobacter baumannii 1656-2] gi|323518583|gb|ADX92964.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332737442|gb|EGJ68358.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6014059] Length = 378 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|149375432|ref|ZP_01893202.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893] gi|149360137|gb|EDM48591.1| acyl-CoA dehydrogenase domain protein [Marinobacter algicola DG893] Length = 388 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 128/324 (39%), Gaps = 60/324 (18%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQ 217 MVA + K APK+ S E+ LG LTE G+D + ++ Sbjct: 96 MVAQFGNADIQKQIAPKMASGEW----------------LGSYCLTEPGAGSDAGNLRTK 139 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-------CFLVPRLLEDGSPNGL 270 + D Y L+G K F+S + +++ G G F+VP +G+ Sbjct: 140 ATRDGDS-YVLNGSKVFISGAGATQMLVVMARTGEPGSGPKGISAFVVP-----ADSDGI 193 Query: 271 CYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGPVEDMKILIYL 318 Y + + K+G S T ++ F N GF++ + G L Sbjct: 194 HYGKAEEKMGWNSQPTRQITFENVRVPANNRLGEEGQGFMIAMKGLDGG---------RL 244 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + A S+ G + +L A +Y R G L ++ +AD+A ++ AA + A Sbjct: 245 NIATCSLGGAQAALLRARNYMHEREQFGQSLAGFQALQFKLADMATNLVAARQMVRLAAY 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D+ + A + + K + V EA++ GG GYI E + R+ R+ Sbjct: 305 RLDQGDTE------ATLHCAMAKRFATDACFEVCNEALQLHGGYGYIREYPLERYVRDLR 358 Query: 439 ANSILLGSGNAMVLDVL-NLLEKG 461 + IL G+ M L V LLE G Sbjct: 359 VHQILEGTNEIMRLIVARRLLEPG 382 >gi|294941816|ref|XP_002783254.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239895669|gb|EER15050.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 436 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 24/266 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255 + L +TE G+D+A I + DG Y ++G K F++S P +D F + G G Sbjct: 174 LALAVTEPYAGSDVANIQTTAVLQPDGKHYLVNGMKTFITSGPWADYFTTAVHIAGDSGL 233 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L L+ D + G+ RL + G +S+ T + F + L+G + Sbjct: 234 SL---LMIDRTLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGFKAIMHN 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ S R+ + +AI YA+ R G LID V++ IA++A + A Sbjct: 290 FNHERLMLALQSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRVLATHYY 349 Query: 373 SFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +A + ++ S+SE + A ++ A T +C + EA + +GG Y++ Sbjct: 350 IENIAIQWPQS-SQSELAGKVALLKVQATKTFEFCAR-------EASQVLGGRSYLQGSG 401 Query: 430 ----IARHYRESPANSILLGSGNAMV 451 I R YRE N+I GS M+ Sbjct: 402 PGARIERLYREVRVNAIGGGSEEIML 427 >gi|119504203|ref|ZP_01626284.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119460206|gb|EAW41300.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 389 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 39/291 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TPR + + PK+ S E+ IG L ++E G+D+ ++ + K D Sbjct: 110 TPRQREQYLPKLCSGEH--------------IGALAMSEPSAGSDVVSMRLRADKKGDH- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P +D +++ A+ E G + ++E SP Q+L +K+G R Sbjct: 155 YILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDSPGFSRAQKL-DKLGMRG 213 Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 + T EL F + +LG+LN ++ LD +SG V L +A Sbjct: 214 SNTCELVFEDCEVPAENILGELNKGVA-----VLMSGLDYERAVLSGGPVGLMQACLDVC 268 Query: 341 RRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 +V DQP+ ++ +AD+ AA+ + + + + D + ++AA A I Sbjct: 269 VPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGEDSRKDAA-AVI 327 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + +MA +A++ +GG+GYI + R R++ I G+ Sbjct: 328 L------YTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGT 372 >gi|221069272|ref|ZP_03545377.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714295|gb|EED69663.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 395 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPEMGARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F N +LG LN+ K+L Sbjct: 190 TAFLIEKGMQGFSIAQKLDKLGMRGSHTGELVFQNVEVPAENILGGLNMGA------KVL 243 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLVQGKVADMYTVLQAG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + E R WC + A + E ++ GG+GYI E Sbjct: 304 RSFAYTVAKNLDLLGT--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRLWRDAKLYEIGAGT 378 >gi|126436590|ref|YP_001072281.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126236390|gb|ABN99790.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 379 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGCFL 257 L+E + G+D AA+ + ++DG Y ++G K W ++D + + A+ G + CFL Sbjct: 127 LSEPQAGSDAAALACKATAVADG-YRINGAKAWITHGGIADFYSLFARTGEGSGGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V + +GL + + + K+G + T + + + + T Sbjct: 186 VEK-----DTDGLSFGKPEEKMGLHAVPTTTAHYDDAL--VPTQRRIGTEGQGLQIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + V LA EA+ YA++R G +ID + +AD+A + +A Sbjct: 239 LDAGRLGIAAVAVGLAQAALDEAVSYAQQRTTFGRKIIDHQGLAFLLADMAAAVDSAR-- 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D A+ R Y+R A + K A V +A++ GG GY + + R Sbjct: 297 ----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGYGYTRDYRVER 351 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 352 YMREAKITQIFEGT 365 >gi|325925878|ref|ZP_08187247.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118] gi|325543709|gb|EGD15123.1| isovaleryl-CoA dehydrogenase [Xanthomonas perforans 91-118] Length = 387 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D + L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI E Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINEYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|317406282|gb|EFV86525.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 384 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 38/328 (11%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + PS T+ + M T V K W + P + + S LTE G+D Sbjct: 79 VDPSTTAFLTIHNMATWMVGK-WGQPALRETWGPLLASGQKLASYC----LTEPGAGSDA 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266 A+++++ Q+ D Y L+G K F+S +D +++A+ G + F VP Sbjct: 134 ASLSTRAQRQGD-HYVLNGAKAFISGGGDTDLLVVMARSGGEGAGGISAFAVP-----AD 187 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAI 322 G+ Y R + K+G S +T + F N G LLG+ E KI + LD Sbjct: 188 SEGISYGRKEEKMGWNSQSTRPIVFENVRVPAGNLLGEEG------EGFKIAMKGLDGGR 241 Query: 323 MSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLA 377 +++ V A+ A RR++ L + ++ +AD+A + AA + A Sbjct: 242 INIGTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVAARQMVRLAA 301 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D A A + K + M + +A + GG GY+ + + R R++ Sbjct: 302 CKLDAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDT 355 Query: 438 PANSILLGSGNAM-VLDVLNLLEKGTNL 464 + IL G+ M V+ LLEKG ++ Sbjct: 356 RVHQILEGTNEIMRVIIARQLLEKGADI 383 >gi|311106651|ref|YP_003979504.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310761340|gb|ADP16789.1| acyl-CoA dehydrogenase 2 [Achromobacter xylosoxidans A8] Length = 375 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 30/263 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +++ ++ ++ D Y L+G K F++S S +++ V G+ G Sbjct: 120 GFALTEPQAGSDASSLHTRARRDGDD-YILNGAKQFITSGRSGQVVIVFAVTDPEAGKRG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVS 305 F+VP G R+++K+G ++ T ++ F + + LG ++ Sbjct: 179 ISAFIVPT-----DTPGYKVLRVEDKLGQHASDTCQIAFEDMRIPAAYRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A SV R + A YAR R G +++ + +AD+A Sbjct: 234 LSNLEGGRIGI----ASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVAFRLADMATQ 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA + A + + EA+ A++ A +MA V + A++ +GG GY+ Sbjct: 290 IHAARQMVLHAAALREAGRPALTEASMAKLFA-------SEMAEKVCSAAIQTLGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGN 448 ++ + R YR+ I G+ + Sbjct: 343 KDFPVERIYRDVRVCQIYEGTSD 365 >gi|241662385|ref|YP_002980745.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240864412|gb|ACS62073.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 397 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPKLVTGEWIGCFGLTEPNHGSDPASMITRAKKV-DGGYSLSGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ ++ G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWGKLPNDNGEDEIRGFILEKGWKGLTAPAIHGKVGLRTSITGEIVLDEVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILID 351 + + N+ G L+SA ++ + AEA + R++V G L Sbjct: 233 --VPEENLMPGVRGLKGPFTCLNSARYGIAWGALGAAEACWHIARQYVLDRKQFGRPLAA 290 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 NQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365 >gi|149186181|ref|ZP_01864495.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp. SD-21] gi|148830212|gb|EDL48649.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp. SD-21] Length = 387 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 53/305 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K + PK+ S E + + +TE G+D+ +IT+ K +G Y Sbjct: 111 TEEQKKKYLPKLVSGE-------------LVSAIAMTEPGVGSDLQSITTTALKDGNG-Y 156 Query: 227 CLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 ++G K ++S+ + FI++ E G L+ LLE G + +KIG Sbjct: 157 RINGAKTYISNGQTADFIIVVAKTDPKERAKGISLM--LLETEGAEGFQRGKKLDKIGMD 214 Query: 283 SNATVELEFSNTF-------------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 + T EL F + F GF L+G+L P E + I A+ +++G Sbjct: 215 AADTSELFFDDVFVPAENVLGGEEGKGFYQLMGEL-----PQERLII------AMGAMTG 263 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + +L + + + R G + D + +AD+ AA ++ +R Sbjct: 264 IEKALETTMDFVKNRKAFGQTIWDFQNTQFVMADLKARATAARVF-------VNDCIARH 316 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 + + A + KYW ++ V+ + ++ GG+GYI + IAR YR+S I GS Sbjct: 317 LKRELSVDTACMAKYWVTELQGEVVDKCLQFHGGAGYINDYPIARMYRDSRITRIFGGSN 376 Query: 448 NAMVL 452 M + Sbjct: 377 EVMKM 381 >gi|40062853|gb|AAR37724.1| isovaleryl-CoA dehydrogenase, putative [uncultured marine bacterium 442] Length = 389 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 39/291 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TPR + + PK+ S E+ IG L ++E G+D+ ++ + K D Sbjct: 110 TPRQREQYLPKLCSGEH--------------IGALAMSEPSAGSDVVSMRLRADKKGDH- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P +D +++ A+ E G + ++E SP Q+L +K+G R Sbjct: 155 YILNGNKFWITNGPDADVYVIYAKTEPDAGSRGITAFIVERDSPGFSRAQKL-DKLGMRG 213 Query: 284 NATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 + T EL F + +LG+LN ++ LD +SG V L +A Sbjct: 214 SNTCELVFEDCEVPAENILGELNKGVA-----VLMSGLDYERAVLSGGPVGLMQACLDVC 268 Query: 341 RRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 +V DQP+ ++ +AD+ AA+ + + + + D + ++AA A I Sbjct: 269 VPYVHDRKQFDQPIGEFQLVQGKLADMYSLTAASRSFLYAVCRALDRGEDSRKDAA-AVI 327 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + +MA +A++ +GG+GYI + R R++ I G+ Sbjct: 328 L------YTAEMATKCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGT 372 >gi|319648126|ref|ZP_08002343.1| MmgC protein [Bacillus sp. BT1B_CT2] gi|317389761|gb|EFV70571.1| MmgC protein [Bacillus sp. BT1B_CT2] Length = 376 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 40/263 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRVGC 255 LTE G+D ++ ++ +K D Y L+G K F+++ +D +++ A + G + Sbjct: 124 LTEPSAGSDAGSLKTRAEKRGD-TYVLNGTKVFITNGGAADIYLVFASTDPEAGTGGISA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303 F+V E G+P G + + K+G + TV L F N GF + N Sbjct: 183 FIV----EKGTP-GFFIGKNEEKMGLHGSLTVTLNFDNAVIPARQLLGEEGMGFKIALSN 237 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + TG + A ++ +L+EA+ + ++R+ G + + + +AD+A Sbjct: 238 LDTGRI---------GIAAQALGIAEGALSEAVQFLKKRYPDGELYKNGQALAFKLADMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA L ++ A+ + + A+ A++ A T + V EA++ +G G Sbjct: 289 ARTEAARLLVYQAASLKQQGMQTGKAASMAKLFASETAMY-------VAGEAVQLLGDFG 341 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y ++ S R++R++ I G+ Sbjct: 342 YTKDFSAERYFRDAKVCEIYEGT 364 >gi|152975507|ref|YP_001375024.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024259|gb|ABS22029.1| acyl-CoA dehydrogenase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 569 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 23/276 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + DG + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEDGTEWTLNGEKQWITNAHMADVYVVFAKTNEGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E S L + K I S AT+ LE N G V G + I Sbjct: 208 RTCEGVS---LGVEEKKMGIKGSSTATLILEDVVIPAKNVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMTIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A D+A +++ + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGIIDKAVDENDDNIMRKMSQFAIECALNKVNASETLGYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + R YR++ + I G+ L V +L K N Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQLN 414 >gi|23014530|ref|ZP_00054341.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 378 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255 LTE G+D A+I ++ ++ D Y +SG K F+S+ + ++ V G+ G Sbjct: 123 LTEPEAGSDAASIRTRARRDGDH-YVISGAKQFISTAKNGQVAIVFAVTDPNAGKRGISA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 F+VP G R+++K+G + T +L F + + LG+ L ++ Sbjct: 182 FVVPT-----DTPGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASYRLGEEGEGLKIALAN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E ++ I A SV R +L A+ YA+ R G + + + +AD+A + Sbjct: 237 LEGGRLGI----AAQSVGMARSALDHALAYAKERKQFGKPIFEHQAVAFRLADMATRLEV 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + +A+ D + +EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 293 AEQMVLHVASLRDAGRPCLKEASMAKLFA-------SEMAERVCSDAIQIHGGYGYLADF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRVCQIYEGTSD 365 >gi|288556703|ref|YP_003428638.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288547863|gb|ADC51746.1| acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 382 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 24/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-----GR 252 + +TE G+D+ AI + I DG Y L+G K F+S+ + D F+++ + + R Sbjct: 124 VAMTEPGTGSDLQAIKTTA--ILDGDSYVLNGSKTFISNGLHGDLFVVVCKTDPRAEPAR 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 G L L+ DG+ G + +K+G RS T+EL F + LLG+ + Sbjct: 182 AGISL---LVVDGNSEGFIKGKKLDKVGLRSQDTLELTFEDVRVPKENLLGEAGKGFYYL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL-DIAA 368 + L AI +V+ V+L + Y + R G +PV L ++A Sbjct: 239 MEQLQQERLIVAIAAVTAAEVTLDSTLTYVKERKAFG-----KPVGSFQHNQFTLVELAT 293 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +S E R E+ MA K+W +A ++ ++ GG GY+EE Sbjct: 294 KGEIGRTFLHSLVERHMRGEDVVKEVSMA---KWWLTDLAKETVSTCVQLHGGYGYMEEY 350 Query: 429 SIARHYRESPANSILLGSGNAM 450 +AR R+ P ++I G+ M Sbjct: 351 EVARRSRDIPVSAIYAGTNEIM 372 >gi|262375286|ref|ZP_06068519.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262309540|gb|EEY90670.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 378 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 35/291 (12%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIG--LG---LTEKRGGTDIAAITSQGQKISDGIYCLSG 230 P ++ Y + T +A G LG LTE + G+D +++ + ++ D + L+G Sbjct: 92 PCGITQRYGTEEQKQQYLTKLATGEWLGCFCLTEPQAGSDASSLECKAERDGDE-WVLNG 150 Query: 231 HKWFLSS----PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K F+++ ++ F + + G+ G CFLVP G RL+ K+G + Sbjct: 151 TKQFITTGKHAQIALVFAVTDKSAGKKGISCFLVPT-----DAPGYIVSRLEEKMGQHCS 205 Query: 285 ATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 T + N LLG ++ +E +I I A SV R +L A+ Sbjct: 206 DTATIVLDNCRIPAANLLGQEGEGYKIALSNLESGRIGI----AAQSVGMARAALDAAVE 261 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G ++ + +AD+A I AA L A D + +EA+ A++ A Sbjct: 262 YANDRKAFGVEIVQHQAVAFRLADMATQIEAARQLVLHAATLKDAGLACLKEASMAKLFA 321 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +A V ++A++ GG GY+ + + R YR+ + I G+ + Sbjct: 322 ST-------IAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASD 365 >gi|254502714|ref|ZP_05114865.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222438785|gb|EEE45464.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 392 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 31/297 (10%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 VA T + W PK+ S EY +G + +TE G+D+ ++ + + Sbjct: 109 VAAYGTDSQKERWLPKLASGEY--------------VGAIAMTEPGTGSDLKSVKTTAEL 154 Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNK 278 + + Y L+G K F+++ + D I++A+ + +G V L LE +G R K Sbjct: 155 VGNE-YVLNGSKIFITNGQTADLIIVVAKTDKTMGTKGVSLLVLETEGADGFTRGRNLKK 213 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333 +G ++N T EL F + LLG G + MK L + L A +++ + ++ Sbjct: 214 LGCKANDTSELFFEDVRVPPENLLGG-EEGQGFYQLMKQLPWERLIIACLALGVIDFAID 272 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E + Y + R G ++D + +A + L + ++ +R +E Sbjct: 273 ETVRYVQDRKAFGQRVMD-------FQNTRFKLAECKTKAEVLRSFLNDCIARMDEGTLD 325 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + KYW ++ + E ++ GG GY+ E IAR Y +S I GS M Sbjct: 326 AATASMAKYWGTQVQNEIANECLQLHGGYGYMMEYPIARIYADSRVQMIYGGSNEIM 382 >gi|212639075|ref|YP_002315595.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212560555|gb|ACJ33610.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 403 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+AAI++ + D Y L+G K W ++D FI+ A Sbjct: 120 PQAKGEKIGAFGLTEPNAGSDVAAISTTAVRDGDD-YILNGQKTWISLCDIADHFIVFAY 178 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + F+V R + G + +K K+G R+ T EL F N + N Sbjct: 179 TDKSKKHRGISAFIVERTMP-----GFSSRAIKGKLGIRAGNTGELFFDNV---RVPKEN 230 Query: 304 VSTGPVEDMKILIY-LDSAIMSVS----GMRVSLAEA-IHYARRRHVSGGILIDQPVMKR 357 + E KI + LD+ +V+ G+ ++ EA + Y R G + ++++ Sbjct: 231 LLGEEGEGFKIAMSALDNGRFTVAAGACGLIMACLEASVKYCHERQTFGKEIGRHQLVQQ 290 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA++ + + L ++ ++ + + E + A+ MA C A +A++ Sbjct: 291 MIANMEAGLQMSRLLVYKAGFLKNKGRRNTRETSLAKWMA-------CDFANKAADDAVQ 343 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY E + R+ R S A I G+ Sbjct: 344 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 372 >gi|78065380|ref|YP_368149.1| Acyl-CoA dehydrogenase-like [Burkholderia sp. 383] gi|77966125|gb|ABB07505.1| Acyl-CoA dehydrogenase-like protein [Burkholderia sp. 383] Length = 395 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 ++E + +LE G GL + K+G R++ T E+ F L+ +++ Sbjct: 184 KLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ + R++V G L ++++ + Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRPLAANQLIQKKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C + + A + + Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDML 349 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 350 GGNGISDEFGVARH 363 >gi|311108193|ref|YP_003981046.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310762882|gb|ADP18331.1| glutaryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] Length = 397 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 GLTE G+D + ++ K +DG Y +SG+K W +SP++D F++ A+ +G++ Sbjct: 137 FGLTEPNHGSDPGGMETRAVKTADG-YKVSGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 F++ + ++ GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 196 RGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVMDEVEISADQMMPGVSGLKGP-- 248 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365 L+SA ++ + AEA H AR+ R G L ++++ +AD+ D Sbjct: 249 ----FTCLNSARYGIAWGAIGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTD 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A RL DE + E + I K C A + A + +GG+G Sbjct: 305 ITLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357 Query: 426 EERSIARH 433 +E +ARH Sbjct: 358 DEFGVARH 365 >gi|327189524|gb|EGE56679.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512] Length = 395 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 21/240 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ DG Y LSG K W ++P++D F++ A+ E + + Sbjct: 138 FGLTEPDHGSDPGSMATRARKV-DGGYSLSGSKTWISNAPIADIFVVWAKTEDNL---IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +LE G GL + K+G R++ T E+ F + + N+ G L Sbjct: 194 GFILEKGW-KGLSAPAIHGKVGLRASITGEVVMDGVF---VPEENLLPGVTGLKGPFTCL 249 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +SA ++ + AE A Y R G L ++++ +AD+A +I+ Sbjct: 250 NSARFGIAWGALGAAEDCYARARQYTLERKQFGRPLAANQLIQKKLADMAAEISLGLQGC 309 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL +E E + I K C A + A + +GG+G +E IARH Sbjct: 310 LRLGRMKEEGHPPVE-------LTSILKRNSCGKALEIARAARDMLGGNGISDEFGIARH 362 >gi|332850707|ref|ZP_08432954.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332866992|ref|ZP_08437309.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] gi|332730544|gb|EGJ61860.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332734321|gb|EGJ65449.1| acyl-CoA dehydrogenase [Acinetobacter baumannii 6013113] Length = 378 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|78048318|ref|YP_364493.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036748|emb|CAJ24441.1| acyl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 597 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNPDGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ DGS N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVGRDGSVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y+R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRERLQSRALSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454 >gi|121603369|ref|YP_980698.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120592338|gb|ABM35777.1| isovaleryl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 393 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 129 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 187 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 L+E G P Q+L +K+G R + T EL F N +LG+LN K+ Sbjct: 188 TAFLIEKGMPGFSVAQKL-DKLGMRGSHTGELVFQNVEVPEQNILGNLNGGA------KV 240 Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 241 LMSGLDYERAVLTGGPLGIMQSVMDNVLPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + ++ +A + D + + R WC + A + E ++ GG+GYI E Sbjct: 301 GRSFAYTVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGIQIYGGNGYINEY 358 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 359 PLGRLWRDAKLYEIGAGT 376 >gi|327440690|dbj|BAK17055.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 391 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 46/273 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR----- 252 + +TE G+D+ +T+ + DG Y ++G K F+++ +SD I+ + + + Sbjct: 133 IAMTEPGAGSDLQKMTTTA--VKDGSDYIVNGQKTFITNGILSDVIIIACKTDPKAVPAH 190 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 V ++ R +E G R +K+G S T EL F N LLG Sbjct: 191 NGVSLLIIERGME-----GFSRGRKLDKVGMHSQDTAELIFENVRVPAENLLG------- 238 Query: 308 PVEDMKILIYLD---------SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 E+ K +YL +A+ +++ + L + Y + R G +P+ K Sbjct: 239 --EEGKGFLYLMQKLQQERLLTAVGAITAAKDMLDLTLQYVKEREAFG-----KPIGKFQ 291 Query: 359 IADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 L A A ++ +F D+ R E + K+W MA + E M+ Sbjct: 292 NTQFTL---AEIATQVKIGQTFVDDLILRHLEGQDLVTEVSMAKWWTTDMARKISVECMQ 348 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+EE IAR +R+ I GS M Sbjct: 349 LHGGYGYMEEYKIARRFRDIAVTPIFAGSNEIM 381 >gi|289664949|ref|ZP_06486530.1| isovaleryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 382 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 138/311 (44%), Gaps = 43/311 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + PK+ S E+ +G L ++E G+D+ ++ + D Sbjct: 103 SPEQKQRYLPKLCSGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 147 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G K W + P +D ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 148 YVLNGSKMWITNGPDADVLVVYAKTDPDAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 206 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL F+ N G L G + V ++ ++++ + + M V L Sbjct: 207 SNTCELVFTDCQVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + + A A + +A + D ++ ++AA A + Sbjct: 264 -YVHERKQFGEPIGSFQLMQAKLADMYVGLNACRAYVYAVARACDAGRTTRQDAAGAILY 322 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A W + +A++ +GG+GYI + R +R++ I G+G + + +L Sbjct: 323 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 372 Query: 457 LLEKGTNLFEQ 467 G LFE+ Sbjct: 373 ---IGRELFER 380 >gi|218673864|ref|ZP_03523533.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli GR56] Length = 500 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/299 (22%), Positives = 137/299 (45%), Gaps = 47/299 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-- 252 + LTE G+D+ + ++ ++ +DG Y + G K F++ DA ++LA++ Sbjct: 160 MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPA 219 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TF 295 + FLVP+ L +DGS N L L++K+G + T + + + Sbjct: 220 GTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGGEKGAI 279 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR-------H 343 G+L+G+ N + M +++A ++V V++AEA + YAR R Sbjct: 280 GWLVGEENKGLACMFTM-----MNNARLAVGMQGVAIAEAATQKALAYARERTQGRAPGS 334 Query: 344 VSGGI---LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIMA 397 + G+ +++ P + R + + + A+S+ A++ D ++ + + A ++ Sbjct: 335 TAAGMSSPIVEHPDVARMLLTMKALTQGSRAISYACAHALDMSRRAGDSRHWQERAALLT 394 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + V + ++ GG G+IEE AR+ R++ I G+ +D++ Sbjct: 395 PIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVT 453 >gi|138896969|ref|YP_001127422.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|134268482|gb|ABO68677.1| Acyl-CoA dehydrogenase (short-chain specific) [Geobacillus thermodenitrificans NG80-2] Length = 380 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 28/272 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D+A++ ++ K D Y L+G K W + ++ +++ A + + Sbjct: 124 GLSEPGAGSDVASMKTRAIKDGDH-YVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V E G+P G + + K+G RS+ T EL F + + N+ E KI Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A+ A+ YA++R G + +Q + +AD+A I A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKQRVQFGKPIAEQQGVSFKLADMATAIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A + +A A++ A T A V +A++ GG+GY ++ Sbjct: 295 ARLLTYQAAWLESNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGNGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R R++ I G+ L + +L + Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|41409792|ref|NP_962628.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462700|ref|YP_884035.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254777353|ref|ZP_05218869.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|41398624|gb|AAS06244.1| FadE5 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163987|gb|ABK64884.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 611 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 57/294 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 G+++ +E ++++ +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393 + P ++R++ AL + D A + EA Y Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLFTSTYQDAAVA---EALYGVDAELAVKV 395 Query: 394 -RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +M P+ K + A A + E+++ GGSG++++ I ++ R+S +S+ G+ Sbjct: 396 NDLMLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDSKIDSLYEGT 449 >gi|332971448|gb|EGK10402.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 380 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D +AI ++ + D Y L G K F+++ +D ++ A + G + Sbjct: 125 LTEPHAGSDASAIRTRAVRKGD-RYILDGSKIFITNAGAADTYVTFAVTDPDQGSKGISA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVEL-------EFSNTFGFLLGDLNVSTGPVEDMK 313 + + GL + + K+G + T EL N G ++ + + Sbjct: 184 FIVEKDTPGLIVGKKEKKMGLGGSNTSELILESAEVPVKNRLGREGQGYEIALSNLAGGR 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I + ++ S + V+ A YA+ RH G + ++ +ADIA ++ AA L Sbjct: 244 IGIGAQALGIATSALEVATA----YAKERHQFGRPIGKLQAIQYKLADIATEVEAARLLI 299 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A + E + +E++ A++ A T A EA++ GG GY E + R Sbjct: 300 YRAATLYQEGRPCRKESSMAKMFASDT-------AMKATVEAVQVFGGYGYTREYPVERL 352 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461 +R++ I G+ L + L KG Sbjct: 353 FRDAKITQIYEGTNEIQRLVIAGELLKG 380 >gi|284038403|ref|YP_003388333.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] gi|283817696|gb|ADB39534.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] Length = 386 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 32/260 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 GLTE G+D + + + D + L+G K F++ +S +A V R G P Sbjct: 124 GLTEPNTGSDAGNMRTTAHRDGDD-WVLNGAKNFITHGISG---HVAVVIARTGEPNTPH 179 Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVED 311 ++E G+P G R ++K+G R++ T E+ F + D V G ++ Sbjct: 180 NATAFIVERGTP-GFAGGRKEDKLGMRASETAEMIFQEC---RISDSQRLGAVGEGFIQS 235 Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +K+L D +S++ + + +A A+ YA+ R G + + + +AD+A I Sbjct: 236 LKVL---DGGRISIAALSLGIAYGAYDAAVAYAKEREQFGQPIANFQGISFKLADMATAI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+++ A D + ++E+A A++ A T A +V +A++ GG GY + Sbjct: 293 EAAKLLTYQAAALKDAGEPVTKESAMAKLFASET-------AVSVANDAVQIFGGYGYTK 345 Query: 427 ERSIARHYRESPANSILLGS 446 + + + YR++ +I G+ Sbjct: 346 DYPVEKFYRDAKLCTIGEGT 365 >gi|228997424|ref|ZP_04157043.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] gi|229005069|ref|ZP_04162793.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228756171|gb|EEM05492.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock1-4] gi|228762300|gb|EEM11227.1| Acyl-CoA dehydrogenase [Bacillus mycoides Rock3-17] Length = 571 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 30/295 (10%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTTWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL +++ I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGLEEKKMG--IKGSSTATLILEDVVIPVENVLG------EVGKGHYVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L+D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELVDFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRS-------EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++R A DEA + ++ + + I K + ++ EA++ GG GY+ Sbjct: 319 AYRTAGVIDEAIHETNGDGSIMQKMSQFAMECAINKVNASETLGNIVDEAVQIHGGYGYM 378 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK-----GTNLFEQLFSTLEQD 475 +E + R YR++ + I G+ L V +L K G + E F +E++ Sbjct: 379 QEYEVERLYRDARISRIFEGTNEINRLTVAKMLMKQTKQIGDQVDEGTFENIERN 433 >gi|72384229|ref|YP_293583.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] gi|72123572|gb|AAZ65726.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] Length = 380 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 34/270 (12%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVE 250 T +G +GLTE G+D A I ++ + DG + ++G K F+S+ S+ I++A V Sbjct: 114 TGTQVGCIGLTEPNAGSDAANIQTRA-VLKDGCWVINGAKTFISNSGSEITGPIVIAAVT 172 Query: 251 G-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G + F+VP +G+P G + + +KIG R + T EL F + LLG Sbjct: 173 GTRPDGRKEISNFIVP----NGTP-GFSHGKKLHKIGWRGSTTFELFFEDCAIPADHLLG 227 Query: 301 DLNV----STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ V + V +ILI + + ++ SL ++ Y R G L ++ Sbjct: 228 EVGVGLRQTLSQVSTGRILI----GTLGLGILQGSLERSVRYMSERTAFGKTLNQFQSLQ 283 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A AA + + A + DE + +A+ A++ A + A +A+ Sbjct: 284 FKLADMATHAHAARLMLYDAAVAKDEGRPYDRQASMAKLFA-------TEKAMEAAHQAV 336 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG+G + E +++R + ++ I+ G+ Sbjct: 337 QIHGGNGIMTEYAVSRAFGDAKVLEIVEGT 366 >gi|71398820|ref|XP_802653.1| isovaleryl-coA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70864406|gb|EAN81207.1| isovaleryl-coA dehydrogenase, putative [Trypanosoma cruzi] Length = 238 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 28/229 (12%) Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K DG Y L+G K W + ++D ++ A+V+G++ F+V E G+P C ++ + Sbjct: 3 KKWGDGKYVLNGCKTWITNGTVADVLLVYAKVDGKITAFVV----EKGTPGFTCGTKI-D 57 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI----YLDSAIMSVSGMRVSLA 333 K G RS+ +L F N +L+ + E+ K ++ L+ ++++ M + +A Sbjct: 58 KCGMRSSQMCQLFFDNV------ELDKTNILGEEGKGMVGMMRNLEIERLTLAAMAIGIA 111 Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + YA R G + + ++R IA+ + AA AL++ ++ S + Sbjct: 112 DRCVELMTRYASERQAFGKPIWNYGQIQRLIAESYAETEAAKALTYSVSRSVSPTSNN-- 169 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 R+ + K + +A V M+ +GG GY E + R +R++ Sbjct: 170 -----RLGSDAAKLFAAPVAKRVADNTMQVMGGMGYSREMPVERLWRDA 213 >gi|254691350|ref|ZP_05154604.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|256256535|ref|ZP_05462071.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260756960|ref|ZP_05869308.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260882772|ref|ZP_05894386.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|297249891|ref|ZP_06933592.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|260677068|gb|EEX63889.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260872300|gb|EEX79369.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|297173760|gb|EFH33124.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 384 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKMLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|226307441|ref|YP_002767401.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226186558|dbj|BAH34662.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 386 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 95/374 (25%), Positives = 166/374 (44%), Gaps = 43/374 (11%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ + P +LR++ G+ I+ R E V + ++ AAR++ +L Sbjct: 25 PNAVEWDQTKHFPV--DVLRKAASLGMG-GIYIR--EDVGGSELSRVDAARIF--EELAK 77 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207 G PS+ + + M T W F + P + +G LTE Sbjct: 78 G---DPSIAAYISIHNMVT------WMIDQFGNDEQRHKWVPGLCSMDQLGSYCLTEPGA 128 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CFLVPRL 261 G+D A ++++ + D Y L+G K F+S + SD ++++A+ G G F+VP+ Sbjct: 129 GSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSDVYVVMART-GSAGAKGISAFIVPK- 185 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 SP GL + + K+G + T ++ F + +LG+ +G MK L Sbjct: 186 ---DSP-GLSFGANEVKMGWNAQPTRQVIFEDVRVPAANMLGEEG--SGFRIAMKGLNGG 239 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L+ A SV G + +L +A+ Y R G LI+ ++ +AD+ ++ AA L +R Sbjct: 240 RLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQLADMRTELEAARTLLWRA 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + ++ S E + + K + V +A++ GG GY+ E I + R+ Sbjct: 300 AAALEDGASDVVE------LCAMAKRFATDTGFDVANKALQLHGGYGYLAEYGIEKIVRD 353 Query: 437 SPANSILLGSGNAM 450 + IL GS M Sbjct: 354 LRVHQILEGSNEIM 367 >gi|206971560|ref|ZP_03232510.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|206733545|gb|EDZ50717.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] Length = 569 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 26/284 (9%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++A TS + L+G K W ++ M+D +++ A+ + F+V Sbjct: 148 LTEPNAGSDALSAKTSAVLNEEGTAWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMKI 314 R E G GL + K I S AT+ LE N G V G + I Sbjct: 208 RTCE-GVSIGL--EEKKMGIKGSSTATLILEDVVIPAENVLG------EVGKGHHVALNI 258 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + L A ++ + ++ ++ Y + R L D +++ IA++ + A + Sbjct: 259 LNFARLKLAFGNIGTAKQAIGLSVQYGKERKQFQTELADFTMIQEKIANMIIATYGAESA 318 Query: 373 SFRLANSFDEAKSRSEEAAYAR-----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 ++R A DEA S+E + I + K + ++ EA++ GG GY++E Sbjct: 319 AYRTAGVIDEAIHESDEDLMKKMSQFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQE 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 + R YR++ + I G+ L V +L K EQL T Sbjct: 379 YEVERLYRDARISRIFEGTNEINRLTVAKMLMKQ---IEQLEDT 419 >gi|71064890|ref|YP_263617.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71037875|gb|AAZ18183.1| isovaleryl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 395 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/257 (21%), Positives = 118/257 (45%), Gaps = 16/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ DG Y L+G K W + P +D ++ A+ +G + Sbjct: 128 LAMSETGAGSDVVSMKLKAEE-KDGHYVLNGSKMWITNGPDADVMMVYAKTNPELGAKGM 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T E+ F+N + N+ G E +K+L+ Sbjct: 187 TAFIVEKGMEGFGTAQKLDKLGMRGSHTGEMTFNNV---EVPKENILGGLNEGVKVLMSG 243 Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + A+++ V M+ + + Y R G + + +++ +AD+ + A + Sbjct: 244 LDYERAVLAAGPVGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + D R+ A ++R + WC + A + E ++ GG+GY E Sbjct: 304 LYTVGKNLDMLDQRA--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R++R++ I G+ Sbjct: 362 LGRYWRDAKLYEIGAGT 378 >gi|304312504|ref|YP_003812102.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301798237|emb|CBL46459.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 385 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 30/297 (10%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP +H+ + REY AP + +G++E GG+D+AA+ + + D Sbjct: 93 MCTPALHR-FGSDELKREY----LAPAIAGDMVGCIGVSEVAGGSDVAALKTTARSEGDD 147 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G K W + +D +LA EG V +VP G+ +Q+++ K Sbjct: 148 -YVINGSKMWITNGTQADWCCLLANTSEGPVHANKSLIIVPM-----DAAGISHQKIE-K 200 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE---- 334 IG S+ T +L F N + + G M+++ + + + + SG SL Sbjct: 201 IGMHSSDTAQLFFDNVRVPKRNRIGIE-GAGFMMQMIQFQEERLCAASGALKSLDRLIDL 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 I Y + RH G LI+ + +A++ ++ +L++R N + K + A+ A+ Sbjct: 260 TIEYCKERHTFGQPLINNQAIHFRLAELRTEVELLRSLTYRAVNEYISGKDVTRLASMAK 319 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A ++ V ++ GG G+ + +++ YR+S SI G+ M+ Sbjct: 320 LKAG-------RLLREVSDSCLQYWGGMGFTYDNPLSQSYRDSRLISIGGGADEIML 369 >gi|299769523|ref|YP_003731549.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298699611|gb|ADI90176.1| Acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 378 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP + G R+++K+G ++ T + N L +L G E KI Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLENCR-IPLENLVGQEG--EGYKIA 233 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + A SV R + A+ YA R G L+ + +AD+A I AA Sbjct: 234 LSNLAAGRIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 294 HQLVLHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDFP 346 Query: 430 IARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 347 VERIYRDVRVSQIYEGASD 365 >gi|134055821|emb|CAK37343.1| unnamed protein product [Aspergillus niger] Length = 437 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K +DG Y ++G K ++++ M S F++ A ++ G + Sbjct: 178 LSEPASGSDAFALKTKAEKTADG-YKINGSKMWITNAMESGVFLVFANLDPSKGYKGITA 236 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + + G + + K+G R+++T L F + L+ N+ + K I L+ Sbjct: 237 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILN 293 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373 + ++ LA A Y G LI + M+ +A +IAAA AL Sbjct: 294 EGRIGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALV 353 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 354 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMGGMGFVREGIAEKM 406 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 407 FRDSKIGAIYEGTSNIQLQTIAKLLQK 433 >gi|118468177|ref|YP_884524.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118169464|gb|ABK70360.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 379 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 24/254 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ ++ DG + L+G K W +D + + A+ EG G CFL Sbjct: 127 LSEPQAGSDAAALRCAARRDGDG-FVLNGSKAWITHGGRADFYTLFARTGEGSKGVSCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VP G GL + + + K+G + T + N + D + T Sbjct: 186 VP-----GDLPGLSFGKPEEKMGLHAVPTTSAFYDNAR--IDADRLIGTEGQGLSIAFSA 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + V +A EA+ YA R G +ID + +AD+A + +A A Sbjct: 239 LDSGRLGIAAVAVGIAQAALDEAVRYAHERTTFGRKIIDHQGLGFLLADMAAAVVSARAT 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D S +A+ A+++A A V +A++ +GG GY + + R Sbjct: 299 YLDAARRRDAGLPYSSQASVAKLVA-------TDAAMKVTTDAVQVLGGVGYTRDFRVER 351 Query: 433 HYRESPANSILLGS 446 + RE+ I G+ Sbjct: 352 YMREAKITQIFEGT 365 >gi|126173735|ref|YP_001049884.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS155] gi|217974012|ref|YP_002358763.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS223] gi|125996940|gb|ABN61015.1| Butyryl-CoA dehydrogenase [Shewanella baltica OS155] gi|217499147|gb|ACK47340.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223] Length = 385 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ Q + + DG Y +SG K F+S + +++ G+ G + Sbjct: 124 LTEPGAGSDAASL--QTKAVRDGDEYVISGSKMFISGAGATELLVVMCRTGQAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y + ++K+G + T ++ F N LLG+ G MK L Sbjct: 182 IAIPADAAGVIYGKAEDKMGWNAQPTRQITFENVRVPVANLLGE--EGQGFAFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + R Sbjct: 240 GRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA +F E AY + K + + V A++ GG GYI E + RH+R Sbjct: 299 LA-AFKLDSHDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|295697789|ref|YP_003591027.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295413391|gb|ADG07883.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 382 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE + G+D AAIT++ ++ G Y + G K F+++ +D +++ A + G + Sbjct: 125 LTEPQAGSDAAAITTRARREPGG-YRIDGQKVFITNGGEADLYLIFANLNPEAGRRGITA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 L + GL + + K+G +AT EL F + + + G E ++ + LD Sbjct: 184 FLVEADNQGLIIGKKERKMGLNGSATTELIFEDC---RVPESARLGGEGEGYRVAMSLLD 240 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ + +AE A Y + R G + D ++ +AD A +I AA L + Sbjct: 241 GGRIGIAAQALGIAEGALELARAYVKERQQFGRRIGDFQGVQFILADRAAEIEAARLLVY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A + ++EAA A++ A T A V +A++ GG GYI++ + R+ Sbjct: 301 RAATMRAKGLPCAKEAAMAKLYASDT-------AMRVTVDAVQLHGGYGYIKDYGVERYM 353 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 354 RDAKVTQIYEGT 365 >gi|295103292|emb|CBL00836.1| butyryl-CoA dehydrogenase [Faecalibacterium prausnitzii SL3/3] Length = 637 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTETNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F+N + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNNV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A++ + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR++ ++ G+ Sbjct: 342 GYLKGMEVERAYRDAKITTLYEGT 365 >gi|169334815|ref|ZP_02862008.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM 17244] gi|169257553|gb|EDS71519.1| hypothetical protein ANASTE_01221 [Anaerofustis stercorihominis DSM 17244] Length = 378 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 GLTE GTD + Q + + DG Y L+G K F+++ +D +++ A + G Sbjct: 123 FGLTEPNAGTDASG--QQTKAVLDGDEYVLNGSKIFITNGKEADTYVIFAMTDKSKGTKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + ++E G+P G + + K+G R ++T EL F++ LLG G Sbjct: 181 ISAFIVEKGTP-GFTFGTKEKKMGIRGSSTYELIFTDCRIPKENLLGQEGRGFGIA---- 235 Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD + ++ + LA+ I + + R G + + IAD+A + A Sbjct: 236 -MQTLDGGRIGIACQALGLAQGALDATIEFVKERKQFGRPIAKFQNTQFQIADMATKVEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A + D K S EAA A++ + ++A V +A++ GG GY E Sbjct: 295 ARNLVYKAAIAKDTKKRFSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGYTREY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 DVERMMRDAKITEIYEGT 365 >gi|326566643|gb|EGE16784.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis 12P80B1] Length = 559 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 36/289 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFVNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406 ++ + AL + L++ F + ++ E E +A ++ PI K + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLSD-FADTVAKGENPSEVKFADEMLSLLTPIAKAFLTE 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLL 451 >gi|313901691|ref|ZP_07835122.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965] gi|313468042|gb|EFR63525.1| butyryl-CoA dehydrogenase [Thermaerobacter subterraneus DSM 13965] Length = 396 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 36/279 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259 LTE G+D AA+ + + DG Y L+G K F+S+ ++D +++ A + G + Sbjct: 128 LTEPDAGSDAAALKTTA--VRDGEHYVLNGRKTFISNGGVADLYVVFAVTDPAAGSRGIS 185 Query: 260 R-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 L+E G+P GL + + K+G R++AT ++ +L + V P E++ Sbjct: 186 AFLVEKGTP-GLSFGKPFKKMGIRASATTDV--------ILEQVRV---PAENLIGREGQ 233 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI L LD+ + + V +A+A + YA +R G + ++ +AD+A Sbjct: 234 GYKIALATLDNGRVGIGAQAVGIAQAALDRAVAYAGQRRQFGRPIGSFQGIQFKLADMAT 293 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A +D++ A+ MA K + ++A V EA++ GG GY Sbjct: 294 QVEAARLLVYRAAVLYDQSVHTGRRASKEIAMA---KLFASEVAMKVTTEAVQIHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKG 461 +++ + R R++ I G+ MV+ L E G Sbjct: 351 LQDFEVERLMRDAKITQIYEGTSEVQRMVIARALLAEAG 389 >gi|300087514|ref|YP_003758036.1| acyl-CoA dehydrogenase domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527247|gb|ADJ25715.1| acyl-CoA dehydrogenase domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 382 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 16/256 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259 LTE+ G+D A+ + K ++G Y L+G K F+++ ++ + ++A + G+ L Sbjct: 124 LTEESAGSDAGAVKTTAVK-TEGGYLLNGSKRFITNGGDAELYTVIACTDPGKGARGLSA 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 ++E G P G + R + K+G R+++T EL F++ L+G + G MK+ Sbjct: 183 FIVEKGIP-GFTFGRKEKKMGIRASSTRELLFNDCLVPAENLIGREGM--GFFHTMKLFE 239 Query: 317 YLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I S V + + AI +AR R G + + ++ +A++A+DI AA AL + Sbjct: 240 KSRPGIGSQAVGIAQGAFEAAIDHARNRVQFGEPVFNFQAVQHMLANMAMDIEAARALVY 299 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + D +S + + ++K + ++ V +A++ +GG GY+ + + + Sbjct: 300 ASARTIDSGLQKS-----GNLESAMSKVYASDVSMRVATDAVQILGGVGYMRDYPVEKFM 354 Query: 435 RESPANSILLGSGNAM 450 R++ I G+ + Sbjct: 355 RDAKITQIYEGTNQVL 370 >gi|289608274|emb|CBI60621.1| unnamed protein product [Sordaria macrospora] Length = 365 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 45/307 (14%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 + +A +P + PK+ S E+ + L ++E G+D+ ++ + Sbjct: 97 NQIARWGSPEQKAKYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAD 143 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 K+ DG Y L+G K W ++P + ++ A+ G + L + G + +K Sbjct: 144 KV-DGGYRLNGTKFWITNAPYAATLVVYAKSAPDAGSKGITAFLIEKDFAGFSIGQKIDK 202 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 +G R + T EL F++ F V D ++ ++ M+ L + Y Sbjct: 203 MGMRGSPTAELVFNDCF-------------VPDDNVM-----GRSTLGLMQACLDTVLPY 244 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + +M+ IAD+++ + +A A + +A + D ++ +AA A ++A Sbjct: 245 VAERKQFGKPIGAFQLMQGKIADMSVALNSARAYVYAVAKACDAGRTTRHDAAGAILLA- 303 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--- 455 + A V +A++ +GG+GY ++ + R+YR+ A + +G+G V +L Sbjct: 304 ------SENAVKVANDAIQALGGAGYTKDWPVERYYRD--AKLLDIGAGTNEVRRMLIGR 355 Query: 456 NLLEKGT 462 LL +GT Sbjct: 356 ELLGEGT 362 >gi|260907811|gb|ACX53707.1| isovaleryl coenzyme A dehydrogenase [Heliothis virescens] Length = 416 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 17/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + + Sbjct: 156 LAMSEPGAGSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDTSSKPQHG 214 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + L+E G P Q+L +K+G R + T EL F + +LG++N + Sbjct: 215 ISAFLIEKGFPGFSTAQKL-DKLGMRGSNTCELVFEDCKVPATNILGEVNKGVYVLMSGL 273 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L L A V M+ ++ A YA R G + + +++ +AD+ ++A + Sbjct: 274 DLERLVLAAGPVGLMQAAIDTAFAYAHTRKQFGKSIGEFQLLQGKMADMYTTLSACRSYL 333 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A + DE S++ A + +C + A V +A++ +GG+GYI + R Sbjct: 334 YSVAKACDEGHVNSKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYPTGRI 386 Query: 434 YRESPANSILLGSGNAMVLDVL 455 R++ I G+G + V +L Sbjct: 387 LRDAKLYEI--GAGTSEVRRML 406 >gi|269126209|ref|YP_003299579.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311167|gb|ACY97541.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 382 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 43/274 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG--RVGC 255 GLTE GG+D+ ++ DG + ++G K F+++ +D AF +A + G + Sbjct: 124 FGLTEPGGGSDVPGGMRTTARLEDGHWVINGSKAFITNSGTDITAFTTVAALTGEREIST 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312 LVP +G+P G R +K+G ++ T EL F+ D+ V P E++ Sbjct: 184 ILVP----NGTP-GFTVGRKYSKVGWAASDTRELSFA--------DVRV---PQENLVGE 227 Query: 313 ------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + L LD ++++ + V LA E + Y R+R G + + ++ IAD Sbjct: 228 RGRGYAQFLQILDEGRIAIAALSVGLAQGCVDECLRYVRQRQAFGRAIGEYQAIQFKIAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + A + A + +EAA A++ A A EA + GG Sbjct: 288 MEARTHTARLAYYAAAAKMLAGEPFKKEAAIAKLTA-------SNAAMDNAREATQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G++ E + R YR+ A + +G G + V +L Sbjct: 341 YGFMNEFPVGRFYRD--AKILEIGEGTSEVQRML 372 >gi|317025737|ref|XP_001389698.2| short/branched chain specific acyl-CoA dehydrogenase [Aspergillus niger CBS 513.88] Length = 438 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K +DG Y ++G K ++++ M S F++ A ++ G + Sbjct: 179 LSEPASGSDAFALKTKAEKTADG-YKINGSKMWITNAMESGVFLVFANLDPSKGYKGITA 237 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + + G + + K+G R+++T L F + L+ N+ + K I L+ Sbjct: 238 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDV---LIPKSNLLGEEGQGYKYAISILN 294 Query: 320 SAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALS 373 + ++ LA A Y G LI + M+ +A +IAAA AL Sbjct: 295 EGRIGIAAQMTGLALGAWENAAQYIWNDRRQFGQLIGEFQGMQHQVAQAYTEIAAARALV 354 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 355 YNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMGGMGFVREGIAEKM 407 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 408 FRDSKIGAIYEGTSNIQLQTIAKLLQK 434 >gi|188592185|ref|YP_001796783.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|170938559|emb|CAP63546.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 391 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 41/283 (14%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VEGR 252 A+ L+E+ G+D +AI + + DG + + G K W + S FI+ A+ V R Sbjct: 123 AVNFALSEREAGSDPSAIQATAVREGDG-WRIRGEKCWLGNGGHSKHFIVFARTGDVAAR 181 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + F+VPR E GL ++K+G R T L ++ D V GP Sbjct: 182 KAISAFVVPRDTE-----GLVVDFYEDKMGIRGTTTTNLRLDV---WVPADSIV--GPEG 231 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRA 358 D L A+ +++ RV +A A YA R G LID + Sbjct: 232 DG-----LKLALATLTVGRVVVAAQANGIALCAYDAARRYAVTRKTFGHTLIDHQGVGFK 286 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD A+ ++AA ++ A +DE K + + K + + + V+ +A++ Sbjct: 287 LADAAMHLSAARMFTYEAARGYDEGKDIG-------TLGAMAKLYASEASHDVVDDAVQI 339 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 +GG GY++ + R YR+ I G+ + + + KG Sbjct: 340 LGGRGYVKPNVVERCYRDQRIVEIYEGTSEIQRIVLARAVRKG 382 >gi|13474683|ref|NP_106252.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] gi|14025438|dbj|BAB52038.1| acyl-CoA dehydrogenase [Mesorhizobium loti MAFF303099] Length = 408 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 25/291 (8%) Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG 230 AP I + E P T IG + +TE G+D+ + ++ +K DG Y ++G Sbjct: 124 APYILHYGSEEQKKKWLPKLATGELIGAIAMTEPGAGSDLQGVKTRAEK--DGNQYRING 181 Query: 231 HKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 K F+++ FI++ +G G L+ ++E G R +KIG ++N T Sbjct: 182 SKTFITNGQLANFIIVVTKTDPEKGAKGTSLI--VVETDEVEGFERGRNLDKIGLKANDT 239 Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341 EL F++ LLG G ++ M+ L L +++ + +LA I Y + Sbjct: 240 SELFFNDVRVPTSNLLGH-EEGQGFIQLMQQLPQERLQIGTGAIAMIERALALTIEYVKE 298 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G +ID + +A++ + +++ +R + A + K Sbjct: 299 RKAFGKAIIDFQNTQFKLAELKTEATIGRVF-------YNDCVTRHINGGLDPVTASMAK 351 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 YW + V+ E ++ GG GY+ E IAR +R++ I G+ M L Sbjct: 352 YWLSDLQGKVVDECLQLHGGYGYMNEYPIARMFRDARVQRIYGGTNEIMKL 402 >gi|83747332|ref|ZP_00944373.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia solanacearum UW551] gi|83726032|gb|EAP73169.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia solanacearum UW551] Length = 385 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR---- 252 I LTE G+D A++ ++ D Y ++G K F++ +P + AF ++A+ G Sbjct: 120 ISFALTEPDAGSDAASLQTRATPDGDH-YVINGTKRFITNAPRAGAFTLMARTGGEGAGG 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 + F+VP G+ + K+G R T ++ N + L+G + G Sbjct: 179 ISAFIVP-----ADTPGIMLGKPDRKMGQRGTKTCDVMLDNVRVSAANLIGGV-AGQGFK 232 Query: 310 EDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + +S + +A +A YA+ R G + D +++ +AD Sbjct: 233 TAMKVL---DRGRLHLSALACGMAHRLITDAAAYAKARRQFGRPIADFQLIQAMLADSQA 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A ++ A +D AK ++A K +C +M V A++ GG+GY Sbjct: 290 ELYAGLSMVRDGARRYD-AKPAGRPDHEVSMLASCAKLFCTEMVGRVADRAVQIHGGAGY 348 Query: 425 IEERSIARHYRE 436 I E + R YR+ Sbjct: 349 IAEYKVERFYRD 360 >gi|254246209|ref|ZP_04939530.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124870985|gb|EAY62701.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 395 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLQENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L+ +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLMPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|126642911|ref|YP_001085895.1| acyl-CoA dehydrogenase A [Acinetobacter baumannii ATCC 17978] Length = 548 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 164/405 (40%), Gaps = 55/405 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 86 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 132 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ ++ DG Y ++G K F++ +D ++LA+ + F+VP+ L Sbjct: 133 KTKAERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLV 192 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 193 NEDGSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 252 Query: 319 DSAIMSVSGMRVSLAEAIHYA----RRRHVSG---------GILIDQPVMKRAIADIALD 365 I + + A YA + R +G IL+ V +R + ++ + Sbjct: 253 SMGIQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDV-RRMLLNVRAN 311 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 312 NEASRAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVF 371 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 372 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 431 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 432 DLDTDLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDY 476 >gi|63101332|gb|AAH94479.1| LOC734152 protein [Xenopus laevis] gi|77748232|gb|AAI06211.1| LOC733389 protein [Xenopus laevis] gi|122936449|gb|AAI30051.1| LOC733389 protein [Xenopus laevis] Length = 417 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 25/266 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV--GCF 256 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + V Sbjct: 157 LAMSEPNSGSDVVSMKLKAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTDLSVQPARG 215 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPV 309 + L+E G+P Q+L +K+G R + T EL F N G L + V + Sbjct: 216 ITAFLVEKGTPGFSTAQKL-DKLGMRGSNTCELVFEDCKIPKENILGHLGKGVYVLMSGL 274 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 D++ L+ L + + M+ L AI Y R G + +M+ +AD+ +AA Sbjct: 275 -DLERLV-LSGGPLGI--MQAVLDHAIPYMHTREAFGQKIGHFQLMQGKMADMYTRLAAC 330 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + +A + D+ + ++ A + + + A V + ++C+GG+GYI + Sbjct: 331 RHYVYNVAKACDQGHADPKDCAGVIL-------YSAESATQVALDGIQCLGGNGYINDYP 383 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + R R++ I G+G + V ++ Sbjct: 384 MGRFLRDAKLYEI--GAGTSEVRRII 407 >gi|254387179|ref|ZP_05002447.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194345992|gb|EDX26958.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 383 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 55/307 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A T + W P++ S + A+G GLTE G+D + ++ Sbjct: 95 AKTIAAWGTEEQKRAWLPRLCSGD--------------ALGCFGLTEPGTGSDAGNLDTR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y LSG K F+++ +D ++ A+ G FLVP SP GL Sbjct: 141 AVRDGDA-YLLSGSKMFITNGTWADVVLLFARTSDAPGHRGVSAFLVP----TDSP-GLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS---AIMS 324 + + K+G R AT EL +L + V GP E + + + MS Sbjct: 195 RREIHGKLGLRGQATAEL--------VLDGVRVPASAMLGP-EGKGFSVAMSALAKGRMS 245 Query: 325 VSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 V+ V +A+ A+ YA +R G + +++ IADI++D+ AA L++R+A+ Sbjct: 246 VAAGCVGIAQAALDAAVSYAAQREQFGKTIAHHQLVQELIADISVDVDAARLLTWRVADL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + E++ A++ A + A + A++ GG GYI+E + R++ Sbjct: 306 IDRGLPFATESSTAKLFA-------SEAAVRAASNALQVHGGYGYIDEYPAGKLLRDARV 358 Query: 440 NSILLGS 446 ++ G+ Sbjct: 359 MTLYEGT 365 >gi|169633254|ref|YP_001706990.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter baumannii SDF] gi|169152046|emb|CAP00930.1| putative acyl-CoA dehydrogenase protein (acdB-like) [Acinetobacter baumannii] gi|193077720|gb|ABO12576.2| putative acyl CoA dehydrogenase oxidoreductase protein [Acinetobacter baumannii ATCC 17978] Length = 378 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 123 LTEPHVGSDASAILCKAERDGDH-WILNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 182 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 237 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|126433697|ref|YP_001069388.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126233497|gb|ABN96897.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 388 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 91/387 (23%), Positives = 157/387 (40%), Gaps = 66/387 (17%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ P +LR + G+ +I+ R E V ++ A R++ QL A Sbjct: 27 PYASEWDESHHFPT--DVLREAAELGM-AAIYCR--EDVGGSGLRRVDAVRIF--EQLSA 79 Query: 149 GH-----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +S A MV + K W P++ S E S+A LT Sbjct: 80 ADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME------------SIA-SYCLT 126 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPR 260 E G+D +A+ ++ + D + L G K F+S + SD ++++A+ EG G + Sbjct: 127 EPGAGSDASALRTKAVREGDH-FVLDGVKQFISGAGSSDVYVVMARTGSEGPRG--ISAF 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLN 303 ++E +P G+ + + K+G + T ++ F FG + LN Sbjct: 184 VVEKDTP-GVSFGAQEQKMGWNAQPTAQVVFEGARVPAENMLGGTDAEGSGFGIAMNGLN 242 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 L+ A S+ G + + +A Y R G L+D+P ++ +AD+A Sbjct: 243 GGR-----------LNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTIRFTLADMA 291 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + + L +R A + DE E + + K + V +A++ GG G Sbjct: 292 TALQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQALQLHGGYG 345 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ E I + R+ + IL GS M Sbjct: 346 YLREYGIEKIVRDLRVHRILEGSNEIM 372 >gi|62317167|ref|YP_223020.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|83269149|ref|YP_418440.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|189022426|ref|YP_001932167.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|237816726|ref|ZP_04595718.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|254698445|ref|ZP_05160273.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254731893|ref|ZP_05190471.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260544401|ref|ZP_05820222.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260759666|ref|ZP_05872014.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260762908|ref|ZP_05875240.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|62197360|gb|AAX75659.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82939423|emb|CAJ12380.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-te [Brucella melitensis biovar Abortus 2308] gi|189021000|gb|ACD73721.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|237787539|gb|EEP61755.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|260097672|gb|EEW81546.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260669984|gb|EEX56924.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260673329|gb|EEX60150.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] Length = 384 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 22/245 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVGCF 256 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADG-- 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E SP GL + K+G + T ++ F N L+G + G MK Sbjct: 181 ISAFIIERNSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTAMK 238 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 239 MLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKC 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D ++ S EA+ A K + +M V ++ GG+GY+ E +I Sbjct: 299 MVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIE 351 Query: 432 RHYRE 436 R YR+ Sbjct: 352 RFYRD 356 >gi|302652212|ref|XP_003017962.1| thermophilic desulfurizing enzyme family protein [Trichophyton verrucosum HKI 0517] gi|291181555|gb|EFE37317.1| thermophilic desulfurizing enzyme family protein [Trichophyton verrucosum HKI 0517] Length = 431 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ ++ + + DG + L+G K W + Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKNFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG LN + +++L+ L+ ++S M+ L + Y R G Sbjct: 262 PHANVLGQLN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D++ S+ A + + Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSSDGAQVKTQDCAGAILYAAER 375 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414 >gi|167766343|ref|ZP_02438396.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1] gi|317496770|ref|ZP_07955100.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167711934|gb|EDS22513.1| hypothetical protein CLOSS21_00847 [Clostridium sp. SS2/1] gi|291559253|emb|CBL38053.1| Acyl-CoA dehydrogenases [butyrate-producing bacterium SSC/2] gi|316895782|gb|EFV17934.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 383 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 30/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252 GLTE GTD A Q + + DG + L+G K F+++ +D +I++A + GR Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGSYADVYIVIAVTGVVEKRGR 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + ++E G+P G + + K+G R +AT EL F + LLG G Sbjct: 181 KMKEISAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFEDCRIPKENLLGKQGKGFGIA 239 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + ++ + LAE I Y + R G + + +AD+A Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALERTIEYVKERKQFGRSIGQFQNTQFQLADMAT 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L ++ A + K S EAA A++ + ++A V +A++ GG GY Sbjct: 295 KVEAAKQLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369 >gi|37676701|ref|NP_937097.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016] gi|37201244|dbj|BAC97067.1| acyl-CoA dehydrogenase [Vibrio vulnificus YJ016] Length = 389 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 89/364 (24%), Positives = 151/364 (41%), Gaps = 35/364 (9%) Query: 116 HCSIWDRS-FEPV-VRKQAHKIRAARLYL--------MAQLEAGHLMSP-SVTSASMVAL 164 + ++WD + F PV V K+A ++ LY M++L+A + S+ S A Sbjct: 32 NAAVWDETQFFPVEVLKEAGELGFLSLYAPEEQGGLGMSRLDAAIIFEQLSMGCTSTTAF 91 Query: 165 MTTPRVHK--DWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 MT +H +W F ++E + + LTE G+D A++ + + Sbjct: 92 MT---IHNMVNWMVGSFATQEVKSLYCQGLNSGDLLGSYCLTEPNSGSDAASLKTTATRQ 148 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 D Y ++G K F+S +++ G G V + G+ Y R + K+G Sbjct: 149 GDE-YRINGAKAFISGAGETQVLVVMARTGSEGAKGVSAFVVPADAQGVSYGRKEPKMGW 207 Query: 282 RSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 S T + F N LG+ + ++ +I I A SV + +L Sbjct: 208 NSQPTRSITFDNVRIPLNHRLGEEGEGFRFAMKGLDGGRINI----ATCSVGTAQQALNL 263 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 A Y + R G L + ++ +AD+A ++ AA L A+ D K + AY Sbjct: 264 ATQYVQERKQFGHTLAEFQTVQFRLADMATELVAARQLVRFSASKLD--KGDPDATAYC- 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + K + + V EA++ GG GYI+E + R +R+ + IL G+ M L V Sbjct: 321 ---AMAKRFATDVGFKVCDEALQLYGGYGYIKEYPLERFFRDVRVHQILEGTNEIMRLIV 377 Query: 455 LNLL 458 L Sbjct: 378 ARRL 381 >gi|300023493|ref|YP_003756104.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525314|gb|ADJ23783.1| acyl-CoA dehydrogenase domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 589 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 53/301 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE G+D+ +T++ DG Y ++G K F++ M++ I L A Sbjct: 161 MNLTEPHAGSDLGPLTTRAVPQDDGTYRITGTKIFITYGEHDMAENIIHLVLARRPDAPA 220 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299 G + FLVP+ L +DGS N + +++K+G ++ T ++F G+L+ Sbjct: 221 GTRG-ISLFLVPKFLVNDDGSLGERNDVVCAGVEHKLGIMASPTCVMKFGENGGATGYLI 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH-----VSGGIL 349 G+ N + + +++A + V V +AE AI YAR R S G Sbjct: 280 GEENRGLA-----TMFVMMNAARLGVGLQGVGVAERATQHAIAYARERRQGKSLASNGSS 334 Query: 350 IDQPV-----------MKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARI 395 P+ M +A+ A I ATA RL+N E K+ ++AA + Sbjct: 335 GMSPIIEHADIRRMLLMMKALTQAARMICFATAREHDIARLSNDPSERKAALDKAA---L 391 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + +A V + ++ GG G++EE A++ R++ I G+ +D++ Sbjct: 392 LTPLAKAFSTDIANEVASLGVQVHGGMGFVEETGAAQYLRDARILPIYEGTNGIQAIDLV 451 Query: 456 N 456 Sbjct: 452 T 452 >gi|332878891|ref|ZP_08446606.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683242|gb|EGJ56124.1| acyl-CoA dehydrogenase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 380 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 41/299 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG G+TE G+D + + K D + L+G K Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDS-WVLNGAK 154 Query: 233 WFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 F++ S ++ G G + +E G+P G + +NK+G R++ T EL Sbjct: 155 NFITHGKSGQIAVVIARTGEKGDKHAITAFAVERGTP-GFSSGKKENKLGMRASETAELV 213 Query: 291 FSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARR 341 F + + D N V G ++ MKIL D +S+ + + +A+ A+ YA+ Sbjct: 214 FQDC---RIPDANRLGEVGEGFIQAMKIL---DGGRISIGALSLGIAKGAYEAALKYAKE 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G LI+ + +AD+A +I A+ L + A K+ + + MA K Sbjct: 268 RVQFGKRLIELQGVGFKLADMATEIEASELLLHKAAYQ----KNNHQRVTLSGAMA---K 320 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +M V EA++ GG GY ++ + + +R+S +I G+ L + ++K Sbjct: 321 MYSSEMCVRVATEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQIDK 379 >gi|241763038|ref|ZP_04761099.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241367821|gb|EER62053.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 377 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 17/251 (6%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ-VEGRVGCFLV 258 GLTE +GG+D+ T++ + G + L G K F+++ ++ +++ A+ E R G FLV Sbjct: 122 GLTEPKGGSDLMGATTRAVRDGSG-WVLDGTKRFITNGGWAEWYLIFARTTEKRFGLFLV 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G+ + + K+G R + T ++ LLGD + + Sbjct: 181 HK-----NDPGVSFGAPERKMGMRGSPTSDVILDAVKLPADRLLGDPERGAEYITQALLR 235 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A ++ +L E + Y R G + +++ +AD+A+ + +A A R Sbjct: 236 SRLHIASHALGIAAGALEETLRYTGEREQFGKPIARFQMVRSMVADMAIRVESARATLHR 295 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + + + A+++A I K C A AV +A++ GG GY+E+ ++ R R Sbjct: 296 AVSLYQAGDPQ------AKMLASIAKVLCSDAAMAVTTDAVQLHGGYGYLEDYAVERMMR 349 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 350 DAKVTQIWEGT 360 >gi|311899897|dbj|BAJ32305.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054] Length = 380 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 39/290 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + W P++ + E + G L+E + G+D AA+ + + + DG Y Sbjct: 105 TPEQRERWLPRMLAGE-------------LVGGYSLSEPQAGSDAAALNCKAEPV-DGGY 150 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 ++G K W +D + + A+ V CFL P G GL + + K+G Sbjct: 151 RITGTKAWITHGGKADFYALFARTAPGPHGVSCFLAP-----GRVEGLTFGPPEEKMGLN 205 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----I 336 + T + G LL + + + I LDS + ++ LA+A + Sbjct: 206 AVPTTAAYWD---GALLERDRLIGAEGQGLPIAFSALDSGRLGIAACATGLAQAALDHAV 262 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA R G ++D + +AD+A + ++ A A D + S +A+ A+++ Sbjct: 263 AYANERTTFGRRIVDHQGLGFLLADMAAAVDSSRATYLDAARRRDLGRPFSRQASVAKLV 322 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A A V +A++ +GG GY + + R+ RE+ I G+ Sbjct: 323 A-------TDAAMKVTTDAVQVLGGYGYTRDFPVERYMREAKIMQIFEGT 365 >gi|296271278|ref|YP_003653910.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296094065|gb|ADG90017.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 610 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 84/375 (22%), Positives = 162/375 (43%), Gaps = 62/375 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIPQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + FLVP+ L D NG+ ++ K+G + + T EL F G+L+G Sbjct: 224 KGLSMFLVPKYLVDLETGELRERNGVYVTNVEKKMGLKVSTTCELRFGEKHPAIGYLVG- 282 Query: 302 LNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGG----------- 347 NV G + M ++I + +++ + A+ +A+ R V G Sbjct: 283 -NVHDG-IRQMFLVIEHARMMVGTKAIATLSTGYLNALEFAKNR-VQGADMTQMADKTAP 339 Query: 348 --ILIDQPVMKRAIADIALDIAAATAL--------SFRLANSFDEAKSRSEEAAYA--RI 395 + P ++R ++ L A A + +F+ A EA+ R + A A + Sbjct: 340 RVTITHHPDVRR---ELMLQKAYAEGMRALVIYTSTFQDAVQIAEAEGRDDADAKAMNDL 396 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + + ++A +++ +GGSG++++ I ++ R+S +S+ G+ +D+ Sbjct: 397 LLPIVKGMGSERSYEMLARSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQGMDLF 456 Query: 456 --NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEK-----I 508 ++ QL+S ++ S L++ L E + + +K I Sbjct: 457 FRKIVRNQGKALGQLYSEIKAFAASDAGN--GRLKEERKLLDEAADEVKAMVDKMVGWAI 514 Query: 509 ALASSAAALYRAGMN 523 A A + +Y+ G+N Sbjct: 515 ASAETPKEIYKVGLN 529 >gi|73998964|ref|XP_535048.2| PREDICTED: similar to Acyl-CoA dehydrogenase, short/branched chain specific, mitochondrial precursor (SBCAD) (2-methyl branched chain acyl-CoA dehydrogenase) (2-MEBCAD) (2-methylbutyryl-coenzyme A dehydrogenase) (2-methylbutyryl-CoA dehydrogenase)... [Canis familiaris] Length = 521 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 32/261 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D+ A+ ++ K + Y ++G K W ++ + F+++ V +G C Sbjct: 265 LSEAGAGSDLFALKTRADKKGN-YYVINGSKMWISNAEYAGLFLVMVNVNPDLGYKGLTC 323 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V R E GL + + K+G R+++T L F N +LG + G + Sbjct: 324 FVVDRDTE-----GLHIGKSEKKMGIRASSTCALTFENVKVPESNILG--QIGHGYKHAI 376 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 IL + + ++ + LA+ + Y + R G + D ++ +A +A + Sbjct: 377 GIL---NEGRIGIAAQMLGLAQGCFDYTVPYMKERMQFGKRIFDFQGLQHQVAHVATQLE 433 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L++ A + K +EA+ A KY+ ++A ++ +E +GG GY ++ Sbjct: 434 AARLLTYNTARLLETGKPIIKEASMA-------KYYAAEVAGLTTSKCIEWMGGVGYTKD 486 Query: 428 RSIARHYRESPANSILLGSGN 448 + +++R++ +I G+ N Sbjct: 487 YPVEKYFRDAKIGTIYEGTSN 507 >gi|33603557|ref|NP_891117.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33577682|emb|CAE34947.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 382 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255 LTE G+D A+ + + D Y L+G K F++ +P++ F ++A+ E R + C Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV E G+P G+ + K+G T ++ F N LLG TG M Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGG-KEGTGFRTSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + ++ + V +AE A+ YA R G + + +++ IAD ++ Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA ++ A D ++ + EAA +K + +M V A++ GG+GYI E Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAA-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346 Query: 428 RSIARHYRESPANSILLGS 446 ++ R YR+ I G+ Sbjct: 347 YAVERFYRDVRLFRIFEGT 365 >gi|311693899|gb|ADP96772.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 383 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 31/308 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGG 208 ++M S A ++ M + W PK+ S E A+G + +TE G Sbjct: 88 NVMVHSDIVAPYLSHMGNEEQRQQWLPKLVSGE--------------AVGAIAMTEPGAG 133 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +D+ AI + K D Y L+G K F+++ +D I+ A+ + + G + L D S Sbjct: 134 SDLQAIRTSAVKDGDE-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVDTSL 192 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAI 322 G R +KIG S T EL FS+ LLG+ G V MK L L Sbjct: 193 PGFSKGRNLDKIGQHSGDTSELFFSDMRIPASALLGE--EGQGFVYLMKELPRERLVIGA 250 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + V+ R SL I YA+ R + G L + IA + D A + + +D Sbjct: 251 LGVAAARGSLDLTIAYAQERELFGQKLAQLQNTRFEIARMETDYRVNKAFVDQCIDQYDL 310 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + + A+ A KY +M V ++ GG GY E I+R + ++ I Sbjct: 311 GELDAPTASMA-------KYSATEMQCRVADGCLQLFGGYGYTTEYPISRAFIDARVQRI 363 Query: 443 LLGSGNAM 450 G+ M Sbjct: 364 YGGTSEVM 371 >gi|229096830|ref|ZP_04227800.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] gi|228686672|gb|EEL40580.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] Length = 569 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERACE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A D+A S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIITTYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|183222662|ref|YP_001840658.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912694|ref|YP_001964249.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777370|gb|ABZ95671.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781084|gb|ABZ99382.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 558 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 74/329 (22%), Positives = 134/329 (40%), Gaps = 43/329 (13%) Query: 148 AGHLMS-PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR 206 AG L++ P + S +++ T + +K W P + S E G+ +TE Sbjct: 241 AGSLITRPEIMSKALLKGGTEEQKNK-WLPLLASGEK-------------FAGIMVTEPN 286 Query: 207 GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VGCFLVP 259 G+D+A ++ +++ G W + ++ ++L + E + L Sbjct: 287 YGSDVAGVSVTAKEVEGGFVINGVKTWCTFAGYANLLLILCRTEADPSLKHRGLSILLAE 346 Query: 260 RLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGP 308 + DG G + IG R + E+ F + F L GD G Sbjct: 347 KPSFDGHEFSYKQEGGGSIQGKAIGTIGYRGMHSYEVSFEDYFVPKENLLGGDAGRGKGF 406 Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M+ + +A + M+ +L A+ Y++ R V + D + K IA +A+ + Sbjct: 407 YFQMEGFAGGRIQTAARANGVMQAALEAALRYSQERKVFAKPIYDYTLTKFKIAKMAMIV 466 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + +A D+ K + E A + K + K+A V EAM+ GG GY E Sbjct: 467 QATRQYTNYVATLLDDHKGQME--------ATLVKLYASKIAEWVTREAMQIHGGMGYAE 518 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 E ++R++ ++ SI G+ M L V+ Sbjct: 519 EYPVSRYFVDARVFSIFEGAEEVMALRVV 547 >gi|71279398|ref|YP_267416.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H] gi|71145138|gb|AAZ25611.1| acyl-CoA dehydrogenase [Colwellia psychrerythraea 34H] Length = 386 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 20/259 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 +G+TE G+D+ A+ + +K+ DG Y ++G K F+S+ D ++ + + G V Sbjct: 129 IGMTEPGAGSDLKALKTSAKKV-DGGYVINGSKTFISNGQHCDIVVLACKTDPNAGAKGV 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + D G + K+G T EL F + F LLG LN TG + MK L Sbjct: 188 SLFIVDADTKGFVKGQKLKKLGIHCQDTSELFFDDMFVPDDALLGPLN--TGFIAMMKEL 245 Query: 316 IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + +++V G + L I Y + R+ G + D + +A++A + Sbjct: 246 PR-ERLLLAVGGQAAAEGMLEITIDYVKERNAFGKRIADFQNTRFKLAELATGV------ 298 Query: 373 SFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 R+ +F D+ E + A + K ++ V E ++ GG GY+ E IA Sbjct: 299 --RVQKAFVDQCVMLLAENKLDAVTASMAKLHVTELQGKVADECLQFFGGYGYMTEYRIA 356 Query: 432 RHYRESPANSILLGSGNAM 450 R + ++ I G+ M Sbjct: 357 REFVDARVQRIYGGTSEIM 375 >gi|330970202|gb|EGH70268.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 393 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ +++ G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARRVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|282891890|ref|ZP_06300369.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498150|gb|EFB40490.1| hypothetical protein pah_c200o039 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 381 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 30/270 (11%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQ---KISDGIYCLSGHKWFLSSPMSDAFIM 245 A Q SV LTE++ G+D I ++ + SD + + + +S I+ Sbjct: 110 AIKQGESVPASFALTEEQAGSDPKNIQTRAEVDLNNSDYFWINGSKRLITNGDLSGVLIV 169 Query: 246 LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 A+ + FL+ R G+P G+ + + K+G + V L F LLG L Sbjct: 170 FAKTTEGISAFLIER----GTP-GMEVSKTEQKLGLLTANLVGLSFDKCRVHRNQLLGKL 224 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356 E +KI L LDS + V+ + +AEA +HY++ R G + + + Sbjct: 225 G------EGLKIALGSLDSGRIGVAAQAIGIAEASYEAALHYSQVREQFGKKICENQAIA 278 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+ + ++AA L +A + + + A K + ++A + +EAM Sbjct: 279 FELADMHVKLSAAKLL-------LSKACWQRVQGISYTLAASEAKLYASEIANEIASEAM 331 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI++ + R++R++ A ++ G+ Sbjct: 332 QIFGGYGYIKDYPLERYFRDARATTLYEGT 361 >gi|229033975|ref|ZP_04188928.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] gi|228728350|gb|EEL79373.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] Length = 376 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V PVE++ Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQ 229 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364 >gi|218282346|ref|ZP_03488628.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989] gi|218216632|gb|EEC90170.1| hypothetical protein EUBIFOR_01210 [Eubacterium biforme DSM 3989] Length = 379 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 38/264 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y ++G K F+++ +D +++ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDGDEYVINGTKIFITNAGEADVYVIFAMTDKTKGTRG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI 314 + +LE G+P G + + K+G R +AT EL F+N P E++ K Sbjct: 181 ISAFILEKGTP-GFTFGLHEKKLGIRGSATCELIFNNV-----------RIPKENLLGKE 228 Query: 315 LIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + A+ ++ G R+ +A EA+ Y ++R G + + +AD+ Sbjct: 229 GMGFKIAMQTLDGGRIGIAAQALGIAQGAIDEAVAYVKQRKQFGRPIAKFQNTQFQLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AA L + A + E + ++ AA A++ A T A + +A++ +GG Sbjct: 289 QTKTDAARWLVYSAATAKQEGRPYTQLAAEAKLFAAET-------AMEITTKAIQLLGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY + + R +R++ I G+ Sbjct: 342 GYTRDLPVERMFRDAKITEIYEGT 365 >gi|194741350|ref|XP_001953152.1| GF17623 [Drosophila ananassae] gi|190626211|gb|EDV41735.1| GF17623 [Drosophila ananassae] Length = 405 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W ++ ++A I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTIATDKGDH-FLLNGTKAWITNAFEAEAAIVFATTNKQLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+VP+ L+ G + ++K+G R ++T +L F + +LG+ P Sbjct: 204 SAFIVPKGLK-----GFSLGKKEDKLGIRGSSTCQLIFEDCAIPKESMLGE------PGF 252 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD+ + ++G + + +A + Y+++R G + +++ IAD++L Sbjct: 253 GFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYSQKRQAFGKPISKLQSIQQKIADMSL 312 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + +A L++R A D + ++EAA A++ A C + ++ +GG GY Sbjct: 313 AMESARLLTWRAAWLKDNKQPYTKEAAMAKLAASEAATMCAH-------QCIQILGGMGY 365 Query: 425 IEERSIARHYRESPANSILLGS 446 + + + RHYR++ I G+ Sbjct: 366 VTDMAAERHYRDARITEIYEGT 387 >gi|83945025|ref|ZP_00957391.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83851807|gb|EAP89662.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 393 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 16/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LG+TE GG+D++ I ++ +K D + + G K F++ M ++ ++ G G + Sbjct: 133 LGMTEPSGGSDLSRIVTKARKDGDD-WVIDGEKTFITGGMKASWYVVGARTGGEGFGGIS 191 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 + G + NK+G + T L F + LG + + D Sbjct: 192 LFVVPADAPGFSRTAITNKMGWWCSDTATLHFDGCRIPERYQLGQEGLCLLAIMDNFNYE 251 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + + + L +AI YA++R G LI ++ IAD++ I A A + Sbjct: 252 RLTLSAGCLGMAKRCLDDAITYAQQRETFGKPLIKHQAIRHKIADMSGRIDALDAYLQMV 311 Query: 377 ANSFDEAKSR-----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A +EA + + E A ++ A T +C EAM+ +GG+GY+ ++ Sbjct: 312 AWRVNEATDKGAAMPAAELAKIKVFASKTAEFCAN-------EAMQILGGAGYLRGCAVE 364 Query: 432 RHYRESPANSILLGSGNAM 450 R YRE +I GS M Sbjct: 365 RIYREVKVMAIGGGSEEIM 383 >gi|99081096|ref|YP_613250.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040] gi|99037376|gb|ABF63988.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040] Length = 407 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K +DG Y L+G K W ++P++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTADG-YRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ D GL +++ K+ R++ T E+ G +G+ VE +K Sbjct: 208 FVL-----DKGTKGLSAPKIQQKMSLRASITGEIVLD---GVEVGE-EALLPHVEGLKGP 258 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +A R RH G L + + + +A++ +IA Sbjct: 259 FGCLNRARYGISWGVMGAAEACWHAARQYGLDRHQFGRPLANTQLFQLKLANMQTEIALG 318 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A + A + GG+G E Sbjct: 319 LQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARHARDMHGGNGISLEFQ 371 Query: 430 IARH 433 + RH Sbjct: 372 VIRH 375 >gi|269124543|ref|YP_003297913.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268309501|gb|ACY95875.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 610 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/298 (22%), Positives = 138/298 (46%), Gaps = 48/298 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIQQPDGTWHIEGVKRFITSAEHDMAENIFHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + FLVP+ L E G NG+ ++ K+G + + T EL F G+L+G Sbjct: 224 KGLSMFLVPKYLVNLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGEKHPAIGYLVGG 283 Query: 302 LNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGG----------- 347 ++ ++ M ++I ++ +++ + A+ YA++R V GG Sbjct: 284 VHEG---IKQMFLIIEYARMMVGTKAIATLSTGYLNALEYAKQR-VQGGDMTQMADKTAP 339 Query: 348 --ILIDQPVMKRAIAD---IALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAP 398 + P ++R++ A + A L+ ++ AK E A ++ P Sbjct: 340 RVTITHHPDVRRSLMTQKAYAEGMRALVMLTATYQDAIQVAKHEGREDKLAEKLNDLLLP 399 Query: 399 ITKYWCCKMAPAVI-AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + + A A++ +E+++ +GGSG++++ I ++ R+S +++ G+ +D+ Sbjct: 400 VVKGFGSERAYALLGSESLQTLGGSGFLQDYPIEQYIRDSKIDTLYEGTTAIQGMDLF 457 >gi|76801956|ref|YP_326964.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160] gi|76557821|emb|CAI49405.1| acyl-CoA dehydrogenase 2 [Natronomonas pharaonis DSM 2160] Length = 379 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 133/292 (45%), Gaps = 45/292 (15%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + ++W PK+ + E T M ++E G+++A I + ++ DG Y L+ Sbjct: 105 MKEEWLPKVANGE---TASCSM----------ISEPAHGSNVAGIETVAEEDGDG-YVLN 150 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K W + ++D +++A+ G + L + +G+ ++ NK+G R++ E Sbjct: 151 GSKMWITNGTVADVGVLMAKTSPGEGHQGITAFLVEMDRDGVTTDKIDNKLGIRASDLAE 210 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVS-----LAE 334 + ++ D+ V P E++ +++ + S SV+ V L Sbjct: 211 V--------VVDDVRV---PEENVIGEVDKGFYQLMEFFASGRTSVAAQAVGAAQGALDA 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI YA +R G + + ++ +A++A + AA +L++R A ++ + A Sbjct: 260 AIEYADQREQFGQKINEFQAIEHKLAEMATQVEAARSLTYRAATEVEQNNQ-----SVAA 314 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + K + +MA V E ++ GGSGY+ + R+YR++ I G+ Sbjct: 315 QFSSMAKLFASEMAVDVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366 >gi|33595280|ref|NP_882923.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565357|emb|CAE36160.1| acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 385 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/318 (22%), Positives = 150/318 (47%), Gaps = 44/318 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +++ + T++ +A + TP+ + P I E + + +TE G+D Sbjct: 94 ILTQTDTASPPIAAVGTPQQKARYLPAIVRGE-------------CLVAIAMTEPDVGSD 140 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLE 263 IA + ++ + D + L G K F+++ + +D +++ A+ + V FLV + Sbjct: 141 IATLRTRAVRDGDE-WVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLV----D 195 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP----VEDMKILI 316 G+P GL +R +K+G +S+ T +L F G LLG N V++ ++++ Sbjct: 196 KGTP-GLRVERRLDKMGWKSSDTAQLSFDGCRVHAGALLGKPNRGFAALMRNVQNERLVL 254 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 A ++ G + ++A+ + Y R R G L D+ ++ +A +A + +A + + Sbjct: 255 ----AAQALGGSQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSV 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + D +R E M K C ++ V+ + ++ G +GY++ ++ R YR+ Sbjct: 311 A-ALD---ARGVECVKEVSM---IKALCGELVNEVMDDCVQFHGATGYMQGTAVERMYRD 363 Query: 437 SPANSILLGSGNAMVLDV 454 + ++I G+ M+ +V Sbjct: 364 ARVHAIGGGATEIMLEEV 381 >gi|262281483|ref|ZP_06059263.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262257071|gb|EEY75809.1| glutaryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 406 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 239 VFVPEENAFPEVRGLRGP------FTCLNSARYGIAWGAMGAAEFCWHTAHRYTMDRKQF 292 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQIALRFGRMKDEGIASVEGTS-------LIKRNNC 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373 >gi|190575228|ref|YP_001973073.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Stenotrophomonas maltophilia K279a] gi|190013150|emb|CAQ46782.1| putative acyl-CoA dehydrogenase oxidoreductase protein [Stenotrophomonas maltophilia K279a] Length = 596 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 46/295 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTENIVHLVLAKLPDAPPGA 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KGISLFVTPKFKVDREGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354 P + ++ + +++A + V + L+E A+ Y+R R +SG D+P Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPAD 339 Query: 355 -------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401 ++R + + + + L+ A D +A R + PI+K Sbjct: 340 PILVHPDVRRMLLTVKSLVEGSRLLALHAATLIDIAHHAEDAAERERADTLVSFLTPISK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A++C GG GYI E + + R++ ++ G+ LD++ Sbjct: 400 ACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454 >gi|126459452|ref|YP_001055730.1| butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548] gi|126249173|gb|ABO08264.1| Butyryl-CoA dehydrogenase [Pyrobaculum calidifontis JCM 11548] Length = 410 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254 +TE G+D+A I ++ +K+ + + ++G K F+SS ++D FI+LA+ + ++ Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKVGNK-WVINGRKAFISSSDVADYFIVLARTYPPPDKKLR 190 Query: 255 CF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 L ++E G+P G ++ +K+G N EL F N + D N G E M Sbjct: 191 YLGLTFFIVEKGTP-GFKIEQCYHKMGLHGNHVCELVFENV---EVPDEN-RVGE-EGMG 244 Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 L +++ A +V M+ +A Y +R G + ++ ++ ++ Sbjct: 245 FLYAMETFDRTRIGVAAQAVGMMQGVFEKAFQYVHQRQAFGLPIAAFQAIQFSLVEMMTK 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A L++ A DE +R E +A + KY+ +A VI+EA+ GG G I Sbjct: 305 IMTARLLTYLAAKLADE--NRKE----FTFVASLAKYYATSVAEEVISEAINLHGGVGVI 358 Query: 426 EERSIARHYRESPANSILLGSGN 448 E + R+ R+ I G+ N Sbjct: 359 VETGVERYLRDVKITQIYEGANN 381 >gi|311693158|gb|ADP96031.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15] Length = 591 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 63/363 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL + + K + K+ S E+ T + LTE + GT Sbjct: 126 MYPGLTHGAISALYAHGSEELKKTYLEKLISGEWTGT-------------MCLTEPQCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ DG Y L G K +++ D ++LA++ G + F+V Sbjct: 173 DLGLIRTRATPNDDGSYALEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVV 232 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 P+ L E G N L++K+G + +AT + F G+L+G+ P + M+ + Sbjct: 233 PKFLPESGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGE------PNDGMRAMFT 286 Query: 318 LDSAIMSVSGMR------VSLAEAIHYARR----RHVSGGILIDQP-------------V 354 + + + GM+ ++ E++ +AR R +SG D P + Sbjct: 287 MMNEARLMVGMQGLGLAEMAYQESLGFARERLQSRSLSGPKNPDGPADPIIVHPDVRRML 346 Query: 355 MKRAIADI---ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 M++ + + AL + A L +A+ + + +++ +++ P+ K + Sbjct: 347 MRQKVLNEGMRALALFAGHQLDLSVAHPDETVRESADD--LVQLLTPVVKSFLTDEGFNN 404 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLF 469 ++ +GGSG+ + + + R+ I G+ +D++ L KG L LF Sbjct: 405 ANTGLQVLGGSGFTTDWPLEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRTLF 464 Query: 470 STL 472 TL Sbjct: 465 GTL 467 >gi|134097255|ref|YP_001102916.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133909878|emb|CAL99990.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 382 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 25/258 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG-- 254 G L+E G+D AA++++ + D W ++D + ++A+ +G G Sbjct: 125 GYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGGVADFYTLMARTSDDGPRGIS 184 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 C LV DG+ GL ++K+G + T EL F G + + + +KI Sbjct: 185 CLLV-----DGTTPGLSAGTPEHKMGLTGSPTTELRFD---GARVPAERLVGAEGDGLKI 236 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LDS + ++ V LA+ A+ YA++R G +I+ ++ +AD+A + + Sbjct: 237 ALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEFQGLEFLLADMAAVVHS 296 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A D A+ R + + A + K A V +A++ +GG GY + Sbjct: 297 AR------ATYLDGARRRDAGMPFG-MQASVAKLVATDAAMKVTTDAVQVLGGVGYTRDF 349 Query: 429 SIARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 350 PAERYMREAKVLQIFEGT 367 >gi|326929944|ref|XP_003211113.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Meleagris gallopavo] Length = 355 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ + D + L+G K W ++ + A ++ A + + Sbjct: 97 LSEPGNGSDAGAASTMARLDGDE-WVLNGTKAWITNAWDASATVVFATTDKSLKHKGISA 155 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLVP GL + ++K+G R+++T L F + LLG L + Sbjct: 156 FLVPM-----PTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKDNLLGQLGMG------F 204 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+A + YA +R G + ++ +AD+A+ + Sbjct: 205 KIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAIQFKLADMAVAL 264 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K ++EAA A++ A + A + +A++ +GG GY+ Sbjct: 265 ESARLLTWRAAMLKDNGKPFTKEAAMAKLAAS-------EAATNIAHQAIQILGGMGYVT 317 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 318 EMPAERHYRDARITEIYEGT 337 >gi|241661733|ref|YP_002980093.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|240863760|gb|ACS61421.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 384 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 14/259 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A +T++ + D Y ++G K F++S M +I +A G G + Sbjct: 129 LAITEPSGGSDVANLTTRAVRDGDH-YVVNGSKIFITSGMRADYITVAVRTGGAGAGGIS 187 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL +G GL LK K+G + T +L F + G LLG N V Sbjct: 188 VLLVEGDTPGLTRTPLK-KMGWWCSDTAQLHFDDCRVPLGNLLGKENHGFELVMRNFNHE 246 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A+ + R L EA+ +A +R G L+ V ++ + +A I A AL L Sbjct: 247 RLALAMQAYGLARTCLTEAVEWATQRETFGKRLVQHQVARQKLVAMATRIEATRALLEDL 306 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 + + + A + +C A++ +GG G++ R YRE Sbjct: 307 MRRMQAGDAPLAQLCMLKNFATQSLQFCADT-------AVQLLGGMGFMRGTKAERIYRE 359 Query: 437 SPANSILLGSGNAMVLDVL 455 ++G G VL L Sbjct: 360 --VKVYMIGGGAEEVLSDL 376 >gi|126651018|ref|ZP_01723229.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] gi|126592219|gb|EAZ86268.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] Length = 397 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 29/268 (10%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q V IG GLTE G+D+AA+++ + D Y ++G K W ++D FI+ A Sbjct: 114 QAKGVRIGAFGLTEPGAGSDVAAMSTTAVRDGDH-YVINGQKTWISLCDIADHFIIFAYT 172 Query: 250 EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + + F+V R S G + +K K G R+ T EL F + + L V Sbjct: 173 DKSKRHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFEDLRVPVENRLGV 227 Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 E KI + LD+ +V+ V L +A + Y R G + + ++ + Sbjct: 228 EG---EGFKIAMSALDNGRFTVAAGAVGLIQACLEASVKYCHERETFGKPIGEHQLVGQM 284 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IA++ + L +R+ ++ + E + A K+ C A +A++ Sbjct: 285 IANMEAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQI 337 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 G GY +E +AR+ R S A I G+ Sbjct: 338 HGAYGYSDEYPVARYLRNSKAPVIYEGT 365 >gi|299537950|ref|ZP_07051236.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] gi|298726532|gb|EFI67121.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] Length = 378 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 36/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA------QVEGRVG 254 LTE G+D ++ S+ + D Y ++G K F+++ +D +I+ A + +G + Sbjct: 124 LTEPSAGSDAGSLQSKAVRDGDD-YVINGSKVFITNGGEADVYIVFASTNPAEKTKG-IS 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 F+V E G+P GL + ++K+G + TV+L F N + LLG+ E Sbjct: 182 AFIV----EKGTP-GLIIGKDEHKMGLHGSRTVQLTFDNCRISADNLLGEEG------EG 230 Query: 312 MKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 KI + LD + ++ + +AEA YA+ R G + Q + +AD+A Sbjct: 231 FKIAMANLDVGRIGIAAQALGIAEAALEASTAYAKERIQFGKPIAAQQGVGFKLADMATA 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + +A L +R A+ + S EA+ A++ + + A EA++ GG GY Sbjct: 291 VESAKLLVYRAADLRAKGLSCGAEASMAKL-------FSSRTAVQTAIEAVQIFGGYGYT 343 Query: 426 EERSIARHYRESPANSILLGS 446 E+ + R++R++ I G+ Sbjct: 344 EDYPVERYFRDAKVTEIYEGT 364 >gi|93005175|ref|YP_579612.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92392853|gb|ABE74128.1| isovaleryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5] Length = 395 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/257 (20%), Positives = 117/257 (45%), Gaps = 16/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ DG Y L+G K W + P +D ++ A+ +G + Sbjct: 128 LAMSETGAGSDVVSMKLKAEE-KDGSYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGM 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T E+ F N + N+ G E +K+L+ Sbjct: 187 TAFIVEKGMEGFGTAQKLDKLGMRGSHTGEMTFKNV---EVPSENILGGLNEGVKVLMSG 243 Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + A+++ + M+ + + Y R G + + +++ +AD+ + A + Sbjct: 244 LDYERAVLAAGPIGIMQAVMDNVVPYIHDRKQFGQAIGEFQLIQGKVADMYTILQAGRSF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + D +R A ++R + WC + A + E ++ GG+GY E Sbjct: 304 LYTVGKNLDMLDARG--AGHSREVRKDCASVILWCAEKATWMAGEGIQIFGGNGYTNEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R++R++ I G+ Sbjct: 362 LGRYWRDAKLYEIGAGT 378 >gi|255319400|ref|ZP_05360616.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|255303536|gb|EET82737.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] Length = 600 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 47/324 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE G+D+ I ++ + +DG Y +SG K Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKI 197 Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F+S+ D I+LA++ G + F+VP+ + G N + +++ Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEH 257 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + F G+L+G N + + +A+ ++ + +I Sbjct: 258 KMGIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIV 317 Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EA 383 YA+ R +SG +I P ++ + AL + LA D E Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEK 377 Query: 384 KSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + EE ++ ++ PI K + + + ++ GG G+I E + + R++ Sbjct: 378 GATEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRI 437 Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463 + G+ LD+L GT Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461 >gi|295664346|ref|XP_002792725.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] gi|226278839|gb|EEH34405.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] Length = 439 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 21/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259 L+E G+D A+ ++ K S G Y +SG K W +S + FI+ A ++ G + Sbjct: 180 LSEPASGSDAFALQTKAVKTSSG-YKISGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 238 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 ++E G+P G + + K+G R+++T VE+ N G + + + Sbjct: 239 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEISKENLIGVEGQGYKYAINLLNEG 297 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I +++ G + A+ I RR+ G ++ + M+ +A +IAAA AL Sbjct: 298 RIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVAQAYTEIAAARAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 F A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 355 VFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEK 407 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 408 MFRDSKIGAIYEGTSNIQLQTIAKLLQK 435 >gi|224825888|ref|ZP_03698992.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224602112|gb|EEG08291.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 386 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 40/313 (12%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQ 219 M+A P V + W P++ T +G LTE G+D A++ + + Sbjct: 96 MIASFAKPEVAEHWVPQMV--------------TGAKLGSYCLTEPGAGSDAASLKTHAE 141 Query: 220 KISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQR 274 K D +Y L+G K F+S S + +++A+ G V F+VP G+ Y + Sbjct: 142 KKGD-VYLLNGSKMFISGAGSTEVLVVMARTGGPGPKGVSAFVVP-----ADAPGIQYGK 195 Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMR 329 + K+G S T + F N LLG+ G MK L ++ A +V + Sbjct: 196 KEKKMGWNSQPTRAVTFDNVEIPAANLLGE--EGQGFTFAMKGLDGGRINIATCAVGTAQ 253 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +LA A Y + R G L D ++ +AD+ ++ AA + A D S S + Sbjct: 254 AALAAAQRYVQERQQFGHALADFQTVQFKLADMLTELVAARQMVRLAAWKLD---SGSPD 310 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A MA K +A V +A++ GG GY+++ + RH R+ + IL G+ Sbjct: 311 ATAYCAMA---KRLATDLAFNVANQALQLFGGYGYLKDFPLERHVRDLRVHQILEGTNEV 367 Query: 450 MVLDVL-NLLEKG 461 M + V +LL+ G Sbjct: 368 MRMIVARHLLKDG 380 >gi|120401264|ref|YP_951093.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954082|gb|ABM11087.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 611 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 63/342 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F+++ +D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQADGTWHIDGVKRFITNGDADDLFENILHVVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + FLVP+ E G NG+ L++K+G +++AT EL F G+L+ Sbjct: 224 TKGLSLFLVPKFHFDPQTGEPGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347 D + G + K++ Y + ++S + A+ YA+ R V G Sbjct: 284 NDTH--NGIAQMFKVIEYARMMVGTKAMSTLSTGYLNALEYAKTR-VQGADMTQMTDKSA 340 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR----IMA 397 +I P ++RA+ AL A D A + +AA A ++ Sbjct: 341 PRVTIIHHPDVRRALLIQKAYAEGLRALYLYTAAHQDPAAADIVSGADAAMADRVNDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 PI K + A + E+++ GGSG++++ I ++ R++ +S+ G+ D Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDF--- 457 Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILR---DSISLCKE 496 F + +D G + V++ LR D +S +E Sbjct: 458 ----------FFRKIARDQGGALLHVVSQLRRFLDDLSAREE 489 >gi|240276621|gb|EER40132.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H143] gi|325095334|gb|EGC48644.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus H88] Length = 428 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 45/256 (17%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 223 Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F++ R D P G +KNK R++ T G + + + PV + Sbjct: 224 GFIIER---DSCPPGTFETPMIKNKTALRASIT-------------GMIQMDSCPVPETN 267 Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357 +L L+SA + ++ G +L + I AR R+ G L ++++ Sbjct: 268 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLAKYQLVQK 327 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD A D A T + +A DE KS E M I K C A E Sbjct: 328 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 380 Query: 418 CIGGSGYIEERSIARH 433 GG+ +E I RH Sbjct: 381 IFGGNAVSDEYHIGRH 396 >gi|85375446|ref|YP_459508.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis HTCC2594] gi|84788529|gb|ABC64711.1| acyl-CoA dehydrogenase family protein [Erythrobacter litoralis HTCC2594] Length = 569 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 89/379 (23%), Positives = 160/379 (42%), Gaps = 70/379 (18%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG----IYCLS 229 + PK+ S E+ T + LTE + G+D+ A+ S I++G Y + Sbjct: 138 YLPKLVSGEWSGT-------------MNLTEPQAGSDVGALRSTAVPITEGEHAGKYRVR 184 Query: 230 GHKWFLS---SPMSDAFIMLAQV------EGRVGC--FLVPR--LLED---GSPNGLCYQ 273 G K +++ ++ I L EG G FLVP+ + +D G N L Sbjct: 185 GQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRNDLRPV 244 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 L++K+G ++ T + + + G L+G N + + +++A ++V V Sbjct: 245 SLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGL-----VAMFTMMNNARINVGNQGV 299 Query: 331 SLAE-----AIHYARRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRL 376 + E A+HYAR R S +++ P ++R + + A AL + Sbjct: 300 QIGERATQQALHYARDRIQSARAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYT 359 Query: 377 ANSFDEAKSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D + +EAA AR I+ P+ K W + + + ++ GG G++EE A+HY Sbjct: 360 AGQVDRG-TIGDEAAKARGEILTPMIKAWGTDIGIEIASIGVQVHGGMGFVEETGAAQHY 418 Query: 435 RESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 R++ I G+ D++ LE G L L + +D K Sbjct: 419 RDARIAPIYEGTNGIQAADLVTRKLGLEDGQALI-GLLEDIARDAADEPKL--------F 469 Query: 492 SLCKEDKGLARFLTEKIAL 510 +L + +AR++ E+ +L Sbjct: 470 ALAGDCAAIARWMREEASL 488 >gi|189485601|ref|YP_001956542.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287560|dbj|BAG14081.1| FAD-dependent acyl-CoA dehydrogenase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 389 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 29/275 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG---- 254 GLTE G+D + + K D Y L+G K F+++ ++ + + A+ G Sbjct: 124 FGLTEAGAGSDATGMATVAVKDGD-YYVLNGTKCFITNGGDAEIYTIFAKTNPDRGARGI 182 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CF+V E G+P G + + + K+G R+++T EL F + + D + + Sbjct: 183 SCFIV----EKGTP-GFEFGKKEKKMGIRASSTRELIFDDCR--VHKDQLIGKEGHGLLT 235 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LD++ V+ + +AE A+ YAR+R G + ++ +A++A ++ A Sbjct: 236 AQATLDNSRPGVAAQALGIAEGALDEAVEYARKRVQFGQPIASFQAIQHLLAEMATEVEA 295 Query: 369 ATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A AL + A D K S+E+A A++ +C ++A V A++ GG GY Sbjct: 296 ARALLYASARMIDSGTGKRTSKESAMAKL-------FCSEVAMRVTTNAVQIFGGYGYTR 348 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV-LNLLEK 460 E + + R++ ++ G+ ++ LNL+++ Sbjct: 349 EYPVEKMMRDAKITTLYEGTSQIQKNEIALNLIKE 383 >gi|148381147|ref|YP_001255688.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|153932219|ref|YP_001385522.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397] gi|153936132|ref|YP_001388928.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall] gi|148290631|emb|CAL84760.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152928263|gb|ABS33763.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. ATCC 19397] gi|152932046|gb|ABS37545.1| butyryl-CoA dehydrogenase [Clostridium botulinum A str. Hall] Length = 379 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 26/270 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + +LE G P G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKQNLLGKEGKGFGIA--MK 237 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L D + ++ + +AE AI Y + R G L ++ IAD+ + + A Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A K+ + +AA A++ A T + V ++++ +GG GY ++ Sbjct: 295 AKYLVYKSAWKKSAGKNYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R R++ I G+ + + N L Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377 >gi|91084343|ref|XP_972925.1| PREDICTED: similar to acyl-coa dehydrogenase [Tribolium castaneum] Length = 401 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A ++ + D + L+G K W + S+A ++LA + + + Sbjct: 141 FALSEPGNGSDAGAASTTARLDGDQ-WMLNGTKAWITNGFESEAAVVLATTDKSLKHKGI 199 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 ++ GL + ++K+G R ++T L F + + N+ P + KI ++ Sbjct: 200 SAIIVPKPTKGLELGKKEDKLGIRGSSTCSLIFEDC---QVPKANLLGEPGQGFKIAMMT 256 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD+ + ++ + +A+A YA +R G L+ ++ +A++AL + AA L Sbjct: 257 LDAGRIGIASQALGIAQASLEVAAEYASKRMAFGKPLLKLQTIQNKLAEMALRLDAARLL 316 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D K+ ++EAA A++ A + A + + ++ +GG GY+ + R Sbjct: 317 TWRAAWLKDNHKNFTKEAAMAKLAA-------SEAATYLSHQCIQILGGMGYVSDMPAER 369 Query: 433 HYRESPANSILLGS 446 HYR++ I G+ Sbjct: 370 HYRDARITEIYEGT 383 >gi|256393573|ref|YP_003115137.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256359799|gb|ACU73296.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 387 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 16/261 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A I + ++ DG + ++G K F++S + +++ A G G + Sbjct: 129 LAVTEPGGGSDVARIQTTARR--DGEHFVVNGAKTFITSGVRADYVVAAVRTGDSGASGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ + G R K+G + T EL F + L+G N + + + Sbjct: 187 SLLVVEKDTPGFTVSRRLEKLGWLCSDTAELAFQDARVPVENLVGAENSGFFQLAEHFLS 246 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L A+ + R+R G LID+ +++ + ++A I A + Sbjct: 247 ERVALAAQAYSHAQRCLDLAVDWTRKRQTFGKPLIDRQLVQNTLTEMARKIDVARTYTHA 306 Query: 376 LAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 L + S K E +A+ A T W V +A++ GG GY+ E + RHY Sbjct: 307 LIDRSLAGEKDLIAEVCFAKNTAVETAEW-------VATQALQLFGGLGYMRESEVERHY 359 Query: 435 RESPANSILLGSGNAMVLDVL 455 R+ + +G G V++ L Sbjct: 360 RD--VRILGIGGGATEVMNGL 378 >gi|299537951|ref|ZP_07051237.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] gi|298726533|gb|EFI67122.1| Acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] Length = 378 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 27/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTYIVFAV 171 Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + + F+V E G + + K+G RS+ T E+ F N + N+ Sbjct: 172 TDPEAKHGTSAFIVEAGFE-----GFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENL 223 Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 E KI + LD ++ V +A+ A+ YA+ R G L + Sbjct: 224 LGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPLTANQGISFK 283 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A I A+ L+++ A + +A A++MA T A +V EA++ Sbjct: 284 LADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAGDT-------AMSVTTEAVQV 336 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378 >gi|91781760|ref|YP_556966.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91685714|gb|ABE28914.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 387 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 53/307 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +V TP + PK + E+ G+GLTE GTD+ AI + Sbjct: 97 AMLVQRNGTPEQKSKYLPKFATGEWRG-------------GIGLTEPDCGTDLQAIRTTA 143 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR------LLEDGSPNGLC 271 +++ D Y ++G+K W +S + +L + + PR LL P G Sbjct: 144 KRVGDE-YVVNGNKTWITNSKHGNTLALLVKTD----TTAQPRHRGMSLLLVQKGP-GFE 197 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED---MKILIYLDSAIMS 324 R K+G + T EL F+ +VST G VE +IL L+ ++ Sbjct: 198 VSRQLEKLGYKGIDTCELSFNG--------YHVSTDALIGGVEGKGLQQILGGLELGRIN 249 Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 V+ V +A E++ Y+++R G + + ++ + ++A + A L A Sbjct: 250 VAARGVGVAQAALDESVSYSQQRKTFGKPICEHQAIQLKLGEMATRVEAGRLLVDAAAQK 309 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D + EA A KY+ + A EAM G GY +E ++ R YR++P Sbjct: 310 YDRGERCDMEAGMA-------KYFATEAALENSIEAMRIHGAYGYSKEYNVERLYRDAPL 362 Query: 440 NSILLGS 446 +I G+ Sbjct: 363 LTIGEGT 369 >gi|115350748|ref|YP_772587.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria AMMD] gi|115280736|gb|ABI86253.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD] Length = 395 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D + ++ +K+ G Y +SG K W + Sbjct: 114 FGSDAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGGMVTRAKKVPGG-YSVSGAKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLEENGKDAIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 LL +++ GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENLLPNVSGLRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRQQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C + Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKS 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|225025846|ref|ZP_03715038.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353] gi|224956831|gb|EEG38040.1| hypothetical protein EUBHAL_00073 [Eubacterium hallii DSM 3353] Length = 386 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 29/272 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD + Q + + DG + L+G K F+++ +D +I++A Sbjct: 115 PLAKGEKLGAFGLTEPGAGTDAQGV--QTKAVLDGDEWVLNGSKCFITNGSYADYYIIIA 172 Query: 248 ------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 GR ++E G+P G + + K+G R +AT EL F + + Sbjct: 173 ITSVDTDARGRKKKKFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDC---RIPK 228 Query: 302 LNVSTGPV-EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354 N+ GP+ + I ++ LD + ++ + +AE I Y + R G + Q Sbjct: 229 ENL-LGPMGKGFAIAMHTLDGGRIGIAAQALGIAEGALDATIAYVKERKQFGRAIAAQQN 287 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +A++A + AA L ++ A + + S EAA A++ A T A V + Sbjct: 288 TQFQLANMATQVEAAKLLVYKAAMAKATQRVYSVEAAKAKLFAAET-------AMDVTTK 340 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ +GG GYI E + R R++ I G+ Sbjct: 341 CVQLLGGYGYIREYDVERMMRDAKITEIYEGT 372 >gi|218673125|ref|ZP_03522794.1| glutaryl-CoA dehydrogenase protein [Rhizobium etli GR56] Length = 395 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 24/265 (9%) Query: 177 KIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WF 234 + F E P + IG GLTE G+D ++ ++ +K+ DG Y L+G K W Sbjct: 114 ETFGSEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAKKV-DGGYSLTGSKTWI 172 Query: 235 LSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++P++D F++ A+ E G + F +LE G GL + K+G R++ T E+ Sbjct: 173 SNAPIADVFVVWAKTEDGLIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEMVMDA 227 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348 F + + N+ G L+SA ++ + AE A Y R G Sbjct: 228 VF---VPEENLLPGVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYTLERKQFGRP 284 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+A +I+ RL +E E + I K C A Sbjct: 285 LAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVE-------LTSILKRNSCGKA 337 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + + + +GG+G +E IARH Sbjct: 338 LDIARASRDMLGGNGISDEFGIARH 362 >gi|157962602|ref|YP_001502636.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847602|gb|ABV88101.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC 700345] Length = 385 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G G + + Sbjct: 124 LTEPGAGSDAASLQTKAIREGDE-YVISGSKVFISGAGATELLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + G+ Y + ++K+G + T E+ F N +LLG+ G MK L Sbjct: 183 VVPADAAGVIYGKAEDKMGWNAQPTREITFENVRVPVSYLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A S+ + +L A Y R G L ++ +AD+A ++ AA L RL Sbjct: 241 RINIATCSIGTAQAALERATKYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F + E AY + K + + V A++ GG GYI E + R+ R+ Sbjct: 300 A-AFKLDQQDPEATAY----CAMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERYVRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|313126840|ref|YP_004037110.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312293205|gb|ADQ67665.1| butyryl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 387 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 34/269 (12%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251 T IG L+E G+D+ A+ + K D Y ++G K W + ++D + A+ + Sbjct: 121 TGEDIGAFALSEAGAGSDVPAMDTTATK-DDDEYVINGGKLWISNGSVADTVTVFAKTDP 179 Query: 252 RVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G V R ED +G + ++K+G++ T EL F LLG+ Sbjct: 180 DAGNKGISSFVVRPEED---DGFIVEGTEDKLGDKGCPTAELRFDEMRIPEDRLLGE--E 234 Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357 G V+ +K L + A S+ R +L +A+ YA R DQP+ +K Sbjct: 235 GEGFVQALKTLNGGRITIAARSIGIARAALDDAVAYADDRE-----QFDQPIAEFQAIKH 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ + AA L + A+ +S +EAA A++ + +++ V E ++ Sbjct: 290 KLADMDTKVQAAKMLMHKAADLKIRGESYIKEAAQAKL-------YASEISREVANEGIQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY ++ R+YR++ N I G+ Sbjct: 343 IHGGYGYTKDFPAERYYRDAKLNEIYEGT 371 >gi|304311346|ref|YP_003810944.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium HdN1] gi|301797079|emb|CBL45292.1| Long chain acyl coenzyme A dehydrogenase [gamma proteobacterium HdN1] Length = 389 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 32/289 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCL 228 + + W PK+ S E +VA + +TE G+D+ A+ + I+DG Y + Sbjct: 117 LKRHWLPKMASGE------------AVA-AIAMTEPGTGSDLQAVRTTA--IADGDDYVI 161 Query: 229 SGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 +G K F+++ +SD +++A+ G + ++ + S G + K+G R T Sbjct: 162 NGSKIFITNGYLSDVVVVVAKTGSGEKAAQNISLIVVEASRAGFTKGKPLKKVGMRGQDT 221 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341 EL F N LLG + G + MK L + + AI+ +G LA + Y ++ Sbjct: 222 CELFFDNVRVPKTNLLGMEGM--GFIMLMKELAWERMMIAIICAAGAEAVLANTVDYVKQ 279 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +A++ +I A R ++K E AA A K Sbjct: 280 RKAFGKPISAFQNTRFKLAEMRAEIQIARVYVDRCLELVLQSKLSVEAAASA-------K 332 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 YW + V+ E ++ GG GY+ E +AR Y ++ AN I G+ M Sbjct: 333 YWVSDLLSKVVDECVQLHGGYGYMLEYPVARAYIDTRANRIYGGTNEIM 381 >gi|301168549|emb|CBW28139.1| putative acyl-CoA dehydrogenase [Bacteriovorax marinus SJ] Length = 382 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 29/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 LTE G+D A + + ++ D Y ++G K W ++ +D F++ + + C Sbjct: 125 LTEPGNGSDAAGLKTTIKEDGDH-YIINGQKMWITNAGYADLFVIYCTTDPELKHKGISC 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308 + L+D + GL + K+G+RS+ T + F+N G L N++ Sbjct: 184 IV----LDDKNVEGLEIGAKEKKMGHRSSDTRAVTFTNVRIPKENLIGNLGDGWNLAKMT 239 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ + ++ A +V G + +L A+ YA+ R L ++ +AD+A+ + A Sbjct: 240 LDHSRPMV----AASAVGGAQCALDHAVKYAKERIQFNKPLAGHQAIQMMVADMAMKVEA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L + A D+ KS +E A+YA+ A K+ V +A++ GG GY E Sbjct: 296 SRLLVHKAAWLLDQGKSNTELASYAKAFAA-DKFM------EVATDAVQVFGGYGYSNEY 348 Query: 429 SIARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 349 PVEKIMRDAKLIQIYEGT 366 >gi|262380864|ref|ZP_06074015.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|262297499|gb|EEY85417.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 600 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 47/324 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PK+ S E+ T + LTE G+D+ I ++ + +DG Y +SG K Sbjct: 151 YLPKLVSGEWTGT-------------MCLTESHAGSDLGIIRTKAEPNADGSYAISGEKI 197 Query: 234 FLSSPMSDA-----FIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F+S+ D I+LA++ G + F+VP+ + G N + +++ Sbjct: 198 FISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNADGSVGERNAVRCGSIEH 257 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G NAT + F G+L+G N + + +A+ ++ + +I Sbjct: 258 KMGIHGNATCVINFDRATGYLIGPENRGLNCMFTFMNTARIGTAVQGLAASESAFQGSIV 317 Query: 338 YARR----RHVSG--------GILIDQPVMKRAIADIALDIAAATALSFRLANSFD--EA 383 YA+ R +SG +I P ++ + AL + LA D E Sbjct: 318 YAKDRLAMRSLSGPKAPEKEADPIIVHPAVRNMLMTQKAFAEGGRALVYLLAQHADVVEK 377 Query: 384 KSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + EE ++ ++ PI K + + + ++ GG G+I E + + R++ Sbjct: 378 GATEEERKFSDNILSLLTPIAKAFLTETGLEAANKGIQVYGGHGFISEHGMEQIVRDTRI 437 Query: 440 NSILLGSGNAMVLDVLNLLEKGTN 463 + G+ LD+L GT Sbjct: 438 ACLYEGTTEIQALDLLGRKVLGTQ 461 >gi|296138435|ref|YP_003645678.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296026569|gb|ADG77339.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 606 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 52/331 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + L+E G+ +A IT++ ++ DG Y ++G K +++ M++ + Sbjct: 159 PMMEGRFTGTMCLSEPEAGSALADITARAERREDGTYAITGTKMWITGGDHEMTENIVHL 218 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA+V G + F+VP+ L + G N + L +K+GN+ L F + Sbjct: 219 VLAKVPGSPDGVKGISLFIVPKYLVNDDTSVGERNDVTLVGLNHKMGNKGTTNCLLAFGD 278 Query: 294 ---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339 G+L+G N +++ ++ A ++V S+A +++ YA Sbjct: 279 GTHPQPGGGATGYLVGTENRGL-----IQMFQMMNEARIAVGYTASSIAYTAYLQSLEYA 333 Query: 340 RRRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 R R + +I+ ++R + AL+ A DEA + ++EA Sbjct: 334 RSRVQGRPVTALDGPQVPIIEHADVRRMLLAQKSFAEGGLALTLYAARLIDEANTAADEA 393 Query: 391 A------YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + + PI K W + A++ GG GY + ++ + YR++ N+I Sbjct: 394 GKVAAEQFLDFLTPIIKSWPSEFGLKANEYAIQIHGGYGYTRDYNVEQLYRDNRLNAIHE 453 Query: 445 GSGNAMVLDVLN--LLEKGTNLFEQLFSTLE 473 G+ LD+L + + G F L +E Sbjct: 454 GAKAIHGLDLLGRKVPQHGGASFGALLGRIE 484 >gi|152985760|ref|YP_001349152.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150960918|gb|ABR82943.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 382 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 17/261 (6%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 + L +TE GG+D+A + ++ + D Y +SG K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFGG 183 Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 V LL E G+P G R K+G ++ T EL F + L+G N + Sbjct: 184 VSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANF 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A+M+ +++L E++ +AR R G + V++ +A++A + + + Sbjct: 243 QSERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFT 302 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A KS +E + A K + +A + +A++ +GG GY+ E + R Sbjct: 303 YRQAAKMSAGKSVIKEISMA-------KNFATDVADRLTYDAVQMLGGMGYMRESLVERL 355 Query: 434 YRESPANSIL-LGSGNAMVLD 453 YR+ N IL +G G+ +++ Sbjct: 356 YRD---NRILTIGGGSREIMN 373 >gi|86131806|ref|ZP_01050403.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] gi|85817628|gb|EAQ38802.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] Length = 394 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 125/258 (48%), Gaps = 17/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + K D Y ++G K F+++ + SD ++ A+ +G + Sbjct: 125 LCITEPFGGSDVAGMRTTAVKEGDH-YIINGSKTFITNGVYSDYLVVAAKTAPELGGKGM 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L D G+ +L +K+G R++ T E+ F N L+G+ N G + Sbjct: 184 SIFLLDRDMPGINATKL-DKLGWRASDTGEISFDNVKVPAENLMGEENAGFGYIMQHFAS 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSF 374 L I + + ++ A+ Y + R + G+ ID+ ++ +A+ ++ + A ++ Sbjct: 243 ERLIMGINAHARAEYAIEYALGYMKER-TAFGVTIDKFQALRHKLAERTAEVEMSKAFNY 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A+ + +EA +++ A K+A VI + ++ +GG GY+EE +AR Sbjct: 302 TVAHRLGNGEYVVKEATMSKLTA-------TKIADEVIYDCLQMLGGYGYMEEYPLARML 354 Query: 435 RESPANSILLGSGNAMVL 452 R+S I G G + +L Sbjct: 355 RDSRLGPI--GGGTSEIL 370 >gi|225556405|gb|EEH04694.1| glutaryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR] Length = 483 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 45/256 (17%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 219 FGLTEPNHGSDPGSMETVAKPHPTKKGYYLISGSKTWITNSPISDYFLVWAKLESVGKIK 278 Query: 255 CFLVPRLLEDGSPNGLCYQR-LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F++ R D P G +KNK R++ T G + + + PV + Sbjct: 279 GFIIER---DSCPPGTFETPVIKNKTALRASIT-------------GMIQMDSCPVPETN 322 Query: 314 IL----------IYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKR 357 +L L+SA + ++ G +L + I AR R+ G L ++++ Sbjct: 323 MLPEVEGLVGPFTCLNSARLGIAFGSMGALEDCIDRARTYALERKQFKGNPLAKYQLVQK 382 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD A D A T + +A DE KS E M I K C A E Sbjct: 383 KLADAATDAAYGTLAAIHVARLNDEGKSVPE-------MISIVKRQNCDRALVGARTLQE 435 Query: 418 CIGGSGYIEERSIARH 433 GG+ +E I RH Sbjct: 436 IFGGNAVGDEYHIGRH 451 >gi|148548730|ref|YP_001268832.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148512788|gb|ABQ79648.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 375 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G+ G F+VP SP G R+++K+G ++ T ++ F N + L Sbjct: 170 TDPEAGKRGISAFIVPT----DSP-GYQVARVEDKLGQHASDTCQIVFDNVHVPVANRLG 224 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357 E KI L L+ + ++ V +A A YA R G LI+ + Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A ++ A + A D + A + A + K + +MA V ++A++ Sbjct: 282 RLADMATKVSVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+ + + R YR+ I G+ + Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|326319047|ref|YP_004236719.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375883|gb|ADX48152.1| Isovaleryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 395 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 131 LAMSEPGAGSDVISMKLRAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F N +LG +N K+L Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENVEVPVSQVLGQVNGGA------KVL 243 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRRQFGQSIGEFQLIQGKVADMYTVLQAG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + E R WC + A + E ++ GG+GYI E Sbjct: 304 RSFAYTVAKNLDMLGT--EHVRQVRKDCASVILWCAEKATWMAGEGIQIFGGNGYINEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRLWRDAKLYEIGAGT 378 >gi|221201024|ref|ZP_03574064.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2M] gi|221206524|ref|ZP_03579537.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221173833|gb|EEE06267.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221178874|gb|EEE11281.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD2M] Length = 395 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +++ + +LE G GL + K+G R++ T E+ F L+ +++ Sbjct: 184 KLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ + R++V G L ++++ + Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C A + A + + Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 350 GGNGISDEFGVARH 363 >gi|117921210|ref|YP_870402.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. ANA-3] gi|117613542|gb|ABK48996.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. ANA-3] Length = 385 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S S +++ G+ G + + Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E AY + K + + V A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|94500787|ref|ZP_01307316.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65] gi|94427109|gb|EAT12090.1| Acyl-CoA dehydrogenase [Oceanobacter sp. RED65] Length = 596 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 75/461 (16%) Query: 69 TAQELAR--MANYNT------PQLHAYGPGGERWDKV-EFHPAWHALLRRSIHDGLHCSI 119 TAQ +A AN+N+ PQ GE+ + E AW + + H Sbjct: 43 TAQRIAEDYFANHNSKADEHEPQFD-----GEKVSTIPEVKEAWKHFSESGLLNARH--- 94 Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSAS--MVALMTTPRVHKDWAPK 177 S++ + I +A L G P +TSA+ ++ + + P Sbjct: 95 ---SYDDGGMQLPALINSACCGLFTSANPGTAGYPFLTSAAANVIQAFGSDEQKAKYLPG 151 Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 +F+ + T + LTE G+ + +T++ DG Y L G K ++S Sbjct: 152 MFNGRFSGT-------------MALTEPDVGSSLGDLTTKAIPQEDGSYKLKGQKMYISG 198 Query: 238 PMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGN 281 D ++LA+VEG + F+ P+ L +DGS N + L +K+G Sbjct: 199 GDQDITENIVHLVLARVEGANKGVKGISLFITPKFLVNDDGSLAERNDVKLAGLLHKMGY 258 Query: 282 RSNATVELEFS---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAE 334 R + L F N G+L+G+ G + M +I + L +A++ G SL Sbjct: 259 RGTTSTVLSFGEEDNCTGYLIGEEGKGLGYMFKMMNEARIGVGLGAAMIGYRGYLESLDY 318 Query: 335 AIHYARRRHVSGGI-------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKS 385 A + + R S +++ +KR + + + AL + DE A Sbjct: 319 AKNRPQGRKPSSKDSSSKPLNIVEHADVKRMLLAQKSYVEGSLALCLFASRLVDEHEAGG 378 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 ++ ++ PI K + A++ +GG+GYI E + + YR++ N I G Sbjct: 379 HADSGILLDLLTPIVKSFPSSYGLKANDYAIQVLGGAGYIREYPVEQCYRDNRLNPIHEG 438 Query: 446 SGNAMVLDVL--NLLEKGTN----LFEQLFSTLEQ--DLGS 478 + LD+L L K + L E++ +TL+Q DL S Sbjct: 439 TYGIQSLDLLGRKLWMKNSQGLQLLMERVQNTLKQAKDLAS 479 >gi|21220196|ref|NP_625975.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|5441775|emb|CAB46799.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] Length = 383 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 59/309 (19%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + W P + S EY +G GLTE G+D +T++ Sbjct: 95 AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGNLTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y ++G K F+++ +D ++ A+ G FLVP GL Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHQGVSAFLVPT-----DTPGLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322 + + K+G R AT EL +L D+ V P M + L Sbjct: 195 RRTIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243 Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 MSV+ V +A+A + YA R G + +++ I+DIALD+ AA L++R+A Sbjct: 244 MSVAAGCVGIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIALDVDAARLLTWRVA 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D + + E++ A++ A + A A++ G GYI+E + R++ Sbjct: 304 DLIDRGQPFAVESSKAKLFA-------SEAAVRAANNALQVFGAYGYIDEYPAGKLLRDA 356 Query: 438 PANSILLGS 446 ++ G+ Sbjct: 357 RVMTLYEGT 365 >gi|325920897|ref|ZP_08182792.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325548649|gb|EGD19608.1| isovaleryl-CoA dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 387 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 43/311 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + + PK+ + E+ +G L ++E G+D+ ++ + D Sbjct: 108 TPEQKQRYLPKLCTGEH--------------VGALAMSEAGSGSDVVSMKLRADARGD-R 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G+K W + P +D ++ A+ + G + ++E G P Q+L +K+G R Sbjct: 153 FVLNGNKMWITNGPDADVLVVYAKTDPAAGARGITAFIVEKGMPGFSTAQKL-DKLGMRG 211 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL F+ N G L G + V ++ ++++ + + M V L Sbjct: 212 SNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLDFERVVLAGGPLGLMAAAMDVVLP--- 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + + A A + +A + D ++ ++AA A + Sbjct: 269 -YVHERKQFGEPIGTFQLMQAKLADMYVGLNACRAYVYAVARACDAGQTTRQDAAGAILY 327 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A W + +A++ +GG+GYI + R +R++ I G+G + + +L Sbjct: 328 AAEKATW-------LTGQAIQVLGGNGYINDYPTGRLWRDAKLYEI--GAGTSEIRRML- 377 Query: 457 LLEKGTNLFEQ 467 G LFE+ Sbjct: 378 ---IGRELFER 385 >gi|184156982|ref|YP_001845321.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|183208576|gb|ACC55974.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|322506879|gb|ADX02333.1| Glutaryl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323516749|gb|ADX91130.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] Length = 403 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 177 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370 >gi|103487014|ref|YP_616575.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98977091|gb|ABF53242.1| isovaleryl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256] Length = 389 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 123/256 (48%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K+ G Y L+G K W ++ +D ++ A+ G + Sbjct: 130 LAMSEAGAGSDVVSMKLKADKVQGG-YVLNGTKFWITNASHADTLVVYAKTSPDAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F++ + ++G N G ++ Sbjct: 189 TAFLIEKDMPGFSIGQKIDKVGMRGSPTAELVFTDCEVSEEQVMGPENGGVGV-----LM 243 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++G+++ + +A I Y R R G + +M+ +AD+ + + +A Sbjct: 244 SGLDYERVVLAGLQLGIMQACLDTVIPYVRERKQFGKPIGAFQLMQAKVADMYVMLQSAR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + + +A + D ++ +AA A ++A + A V EA++ +GG+GY ++ + Sbjct: 304 SYVYNVAKACDAGQTTRFDAAGAILLA-------SESAVKVAGEAIQALGGAGYTKDWPV 356 Query: 431 ARHYRESPANSILLGS 446 R++R++ I G+ Sbjct: 357 ERYWRDAKLLDIGAGT 372 >gi|161525739|ref|YP_001580751.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189349539|ref|YP_001945167.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616] gi|221214378|ref|ZP_03587349.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1] gi|160343168|gb|ABX16254.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189333561|dbj|BAG42631.1| glutaryl-CoA dehydrogenase [Burkholderia multivorans ATCC 17616] gi|221165635|gb|EED98110.1| putative glutaryl-CoA dehydrogenase [Burkholderia multivorans CGD1] Length = 395 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YSLSGAKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +++ + +LE G GL + K+G R++ T E+ F L+ +++ Sbjct: 184 KLDEDGKDTIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENLMPNVSG 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ + R++V G L ++++ + Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C A + A + + Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 350 GGNGISDEFGVARH 363 >gi|328950047|ref|YP_004367382.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] gi|328450371|gb|AEB11272.1| Butyryl-CoA dehydrogenase [Marinithermus hydrothermalis DSM 14884] Length = 381 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + +++ DG Y L+G K W S + ++++A+ G + Sbjct: 124 LTEPHAGSDPASLKLRAERV-DGGYVLNGVKSWITSGGQAQLYVVMARTGGEGARGITAF 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI--- 314 L+E +P GL + + + K+G + T E+ F F LG+ E M + Sbjct: 183 LVEKDTP-GLSFGKPEEKMGLHAAHTTEVRFDEVFVPEENRLGE--------EGMGLKYA 233 Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDS + ++ V +A A + YA R G L + +AD+A I AA Sbjct: 234 LSGLDSGRIGIAAQAVGIARAAYEIARDYADERTQFGQKLRAFEGVSFKLADMATRIEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A D S+EA+ A++ A + A V +A++ +GG GY E Sbjct: 294 RLLLLNAAARKDRGLPFSKEASMAKLFA-------SETAVEVTRQAVQILGGYGYAREYR 346 Query: 430 IARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 347 VERYYRDAKITEIYEGT 363 >gi|299067684|emb|CBJ38893.1| dehydrogenase [Ralstonia solanacearum CMR15] Length = 397 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 20/263 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D A++ ++ +K+ DG Y LSG K W + Sbjct: 115 FGSEAQKQKYLPRLATGEWIGCFGLTEPNHGSDPASMVTRAKKV-DGGYSLSGTKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP+++ F++ A++ G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIANVFVVWAKLPDDNGEDQIRGFILEKGWKGLSAPVIHGKVGLRTSITGEIVLDEVF- 232 Query: 297 FLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-- 353 + + N+ G V +K L+SA ++ + AE+ + R++V +P Sbjct: 233 --VPEENLMPG-VHGLKGPFTCLNSARYGIAWGALGAAESCWHTARQYVLDRTQFGRPLA 289 Query: 354 ---VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +I RL D+ + E + I K C A Sbjct: 290 ANQLIQKKLADMQTEITLGLQGCLRLGRMKDDGTAAVE-------ITSIMKRNSCGKALD 342 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E + RH Sbjct: 343 IARMARDMLGGNGISDEFGVIRH 365 >gi|299753045|ref|XP_001833025.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130] gi|298410118|gb|EAU88714.2| isovaleryl-CoA dehydrogenase [Coprinopsis cinerea okayama7#130] Length = 438 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 20/263 (7%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG 251 + V +G L ++E G+D+ ++ + K+ G Y L+G+K W + P++ ++ A+ Sbjct: 168 SGVKVGSLAMSETGSGSDVVSMKLRADKVKGG-YKLNGNKFWITNGPVASTLVVYAKTSP 226 Query: 252 RVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + ++E G P Q+L +K G R + T EL F + + NV G V+ Sbjct: 227 DKGSKGITAFIVEKGMPGFSTSQKL-DKFGMRGSDTCELVFEDCVVPEVVAENV-LGQVD 284 Query: 311 DMKILIY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ LD + +SG M+ + A+ Y R G + +M+ IAD+ Sbjct: 285 RGAAVLMSGLDLERIVLSGGPLGLMQAAFDYAVEYVHDRKQFGQPVGTFQLMQAKIADMY 344 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++A+ A + +A + D+ + ++ A A + + + A V E M+C+GG+G Sbjct: 345 TKLSASRAYVYAVARACDQGRISRKDCAGAIL-------YSTEKAVEVTLEGMQCLGGNG 397 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI + R R++ ++ G+ Sbjct: 398 YINDYPTGRLVRDARLYTVGAGT 420 >gi|284048908|ref|YP_003399247.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] gi|283953129|gb|ADB47932.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans DSM 20731] Length = 635 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A T + + L+G+K F+++ +D +++ A E G+ + Sbjct: 123 FGLTEPNAGSD-AGETETTAEFDGTHWILNGNKIFITNAGKADTYVVFAVTEPGKGTRGI 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 ++E G P G + +K+G RS+AT EL F+N L N+ + KI + Sbjct: 182 SAFIVEKGMP-GFTFGDHYDKLGIRSSATAELIFNNV---KLPKENLLGKRGQGFKIAMA 237 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAATA 371 LD + ++ + +A+ + A + I + P+ + +AD+A + AA Sbjct: 238 TLDGGRIGIAAQALGIAQGAYEAALNYSKERIQFNAPICQNQGVSFKLADMATKLRAARF 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A E + E+A A++ + A ++ +A++ GG+GY++ + Sbjct: 298 LVYSAAELKQEHQDYGMESAMAKM-------YASDAAVSITNDALQIFGGTGYLKGMDVE 350 Query: 432 RHYRESPANSILLGS 446 R YR++ +I G+ Sbjct: 351 RFYRDAKITTIYEGT 365 >gi|332875821|ref|ZP_08443616.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|332736001|gb|EGJ67033.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 406 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKV-DGGYRLTGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373 >gi|222833226|gb|EEE71703.1| predicted protein [Populus trichocarpa] Length = 366 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 51/309 (16%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A +A + + W PK+ S E + +G+TE G+D+ A+ + Sbjct: 84 APYIARIANEEQKQRWLPKVCSGE-------------AILAIGMTEPGTGSDLKAVRTTA 130 Query: 219 QKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 I DG Y ++G K F+S+ ++ D IM+ + + G V ++ + G R Sbjct: 131 --IRDGDEYVINGSKTFISNGLNCDLIIMVCKTDPAAGSRGVSLIMVEADREGFRRGRKL 188 Query: 277 NKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 K+G + T EL F N F +L+G+L P E + I A+ Sbjct: 189 EKVGQHAQDTAELFFDNVRVPVSNLLGEEGKGFAYLMGEL-----PQERLSI------AV 237 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI-ALDIAAATALSFRLANSFD 381 + + + L I Y + R + D K +ADI A +A + + L+ Sbjct: 238 SAAAKLEACLDHTIAYVKERKAFNQTVWDFQNTKFKLADIKAQAVAVRVMVDYYLSEHIR 297 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 S E A I K + + + E ++ GG GY+ E +AR + +S Sbjct: 298 RRLSLEE--------AAIAKLYATEALGKALDEMVQLHGGYGYMLEYPVARAFADSRVTR 349 Query: 442 ILLGSGNAM 450 I G+ M Sbjct: 350 IYGGTSEVM 358 >gi|254523722|ref|ZP_05135777.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] gi|219721313|gb|EED39838.1| acyl-CoA dehydrogenase [Stenotrophomonas sp. SKA14] Length = 596 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 46/295 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG Y ++G K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKLPDAPAGA 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+ P+ D G N L +++K+G + + T + F G+L+G Sbjct: 226 KGISLFVTPKFKVDRDGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQGYLVGQ---- 281 Query: 306 TGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGGILIDQPV- 354 P + ++ + +++A + V + L+E A+ Y+R R +SG D+P Sbjct: 282 --PHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRALSGAKFPDKPAD 339 Query: 355 -------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPITK 401 ++R + + + + L+ A D +A R + PI+K Sbjct: 340 PILVHPDVRRMLLTVKSLVEGSRLLALHAATLIDVAHHAEDAAERERADTLVSFLTPISK 399 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + A++C GG GYI E + + R++ ++ G+ LD++ Sbjct: 400 ACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQALDLIG 454 >gi|222111004|ref|YP_002553268.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221730448|gb|ACM33268.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 388 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 30/263 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254 LTE G+D A+I ++ + + + Y ++G K F+S S D +++A+ G + Sbjct: 124 LTEPGAGSDAASIKTRAELVGN-EYVINGSKAFISGAGSTDVLVLMARTGDAQSGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307 F VP L G+ Y + + K+G S T ++ F N LLG ++ Sbjct: 183 AFAVPANLP-----GIHYGKKEEKMGWNSQPTRQISFDNVRIPANHLLGQEGEGFKIAMK 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A SV + +L A Y + R G + ++ +AD+A ++ Sbjct: 238 GLDGGRINI----ATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELV 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA S +A +R A + K + + V+ EA++ GG GYI E Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDVGFTVVNEALQLHGGYGYIRE 347 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + R R++ + IL G+ M Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370 >gi|52082251|ref|YP_081042.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52787643|ref|YP_093472.1| AcdA [Bacillus licheniformis ATCC 14580] gi|52005462|gb|AAU25404.1| acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52350145|gb|AAU42779.1| AcdA [Bacillus licheniformis ATCC 14580] Length = 379 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 28/283 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247 PM + GLTE G+D + + +K D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMARGEKIGAYGLTEPGSGSDAGGMKTTAEKKGD-EYILNGTKIFITNGGIADFYIVFAN 171 Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 Q F+V + G + + K+G RS+ T E+ F + L L Sbjct: 172 LAPEQKHKGTTAFIVEKDF-----PGFSVGKKERKLGIRSSPTTEIIFQDCRVPLKNRLG 226 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 G E KI + LD ++ V +A+ A YA+ R G + +Q + Sbjct: 227 ---GEGEGFKIAMKTLDGGRNGIAAQAVGIAQGAFEAAKAYAKERKQFGRPIAEQQGIAF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A +I A+ L+++ A SE Y + A ++K + A V EA++ Sbjct: 284 KLADMATEIEASRLLTYQAAWL------ESEGLPYGKASA-MSKLYAGDTAMKVTTEAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 337 IFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQKLVISRMLMK 379 >gi|169826482|ref|YP_001696640.1| acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus sphaericus C3-41] gi|168990970|gb|ACA38510.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus sphaericus C3-41] Length = 390 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 23/257 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ K GLTE G+D A T I Y ++G K ++++ I++ V Sbjct: 123 PLAKGETLGSFGLTEPNAGSD-AGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAV 181 Query: 250 EGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G+ G ++ ++ + G+ +K+G R + T E+ N LLGD Sbjct: 182 TGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRSNLLGDEKR 241 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + L LD +S++ + V +A+A + +A+ R G + ++ + Sbjct: 242 GFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A++I A L + A D+ K +EAA A++ A + C +A++ Sbjct: 297 ADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQIH 349 Query: 420 GGSGYIEERSIARHYRE 436 GGSGY++E + RH R+ Sbjct: 350 GGSGYMKEYDVERHLRD 366 >gi|5869965|emb|CAB55554.1| Isovaleryl-CoA Dehydrogenase [Pisum sativum] Length = 408 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 20/236 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ DG Y L+G+K W + ++ ++ A+ + G + Sbjct: 150 LAMSEPNSGSDVVGMKCKADRV-DGGYVLNGNKMWCTNGTVAQTLVVYAKTDITAGSKGI 208 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P Q+L +K+G R + T EL F N F + D NV + + +++ Sbjct: 209 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCF---VPDENVLGKEGKGVYVMMS 264 Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + +SG M+ L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 265 GLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSLQSSRS 324 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + +A D K ++ A + A + A V +A++C+GG+GY+ E Sbjct: 325 YVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNE 373 >gi|239825998|ref|YP_002948622.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] gi|239806291|gb|ACS23356.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] Length = 401 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+A+I++ + D Y L+G K W ++D FI+ A Sbjct: 114 PQAKGEKIGAFGLTEPNAGSDVASISTTAVRDGD-YYILNGQKTWISLCDIADHFIVFAY 172 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + F+V R + G + +K K+G R+ T EL F N + N Sbjct: 173 TDKSKKHRGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 224 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 + E KI + LD+ +V+ V L A + Y R G + ++++ Sbjct: 225 LLGEEGEGFKIAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQ 284 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA + + + L +++ ++ + + EA+ A+ +A C A +A++ Sbjct: 285 MIARMEAGLQISRLLVYKVGFLKNQGRRTTREASLAKWIA-------CDFANQAADDAVQ 337 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY E + R+ R S A I G+ Sbjct: 338 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 366 >gi|5869967|emb|CAB55555.1| auxin binding protein (ABP44) [Pisum sativum] Length = 409 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 20/236 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ + + ++ DG Y L+G+K W + ++ ++ A+ + G + Sbjct: 151 LAMSEPNSGSDVVGMKCKADRV-DGGYVLNGNKMWCTNGTVAQTLVVYAKTDITAGSKGI 209 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P Q+L +K+G R + T EL F N F + D NV + + +++ Sbjct: 210 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCF---VPDENVLGKEGKGVYVMMS 265 Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + +SG M+ L + Y R+R G + + ++ +AD+ + ++ + Sbjct: 266 GLDLERLVLSGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMFTSLQSSRS 325 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + +A D K ++ A + A + A V +A++C+GG+GY+ E Sbjct: 326 YVYSVARDCDNGKVDPKDCAGVILCAA-------ERATQVALQAIQCLGGNGYVNE 374 >gi|33594204|ref|NP_881848.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33564279|emb|CAE43573.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332383618|gb|AEE68465.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 382 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255 LTE G+D A+ + + D Y L+G K F++ +P++ F ++A+ E R + C Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV E G+P G+ + K+G T ++ F N LLG TG M Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGG-KEGTGFRTSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + ++ + V +AE A+ YA R G + + +++ IAD ++ Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA ++ A D ++ + EAA +K + +M V A++ GG+GYI E Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAA-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346 Query: 428 RSIARHYRESPANSILLGS 446 ++ R YR+ I G+ Sbjct: 347 YAVERFYRDVRLFRIFEGT 365 >gi|225872674|ref|YP_002754131.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] gi|225794071|gb|ACO34161.1| acyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] Length = 398 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 24/246 (9%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCF-LV 258 GLTE G+D A + K D + L+G K F+++ +D +++A + G L Sbjct: 137 GLTEPGSGSDAAGARTTAVKKGDK-WVLNGSKTFITNGSYADVTVVIAVTDKTQGTHGLS 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 ++E G+P G + +NK+G R++ T EL F + LLG L G V+ M+I Sbjct: 196 AFVVEKGTP-GFRPGKKENKLGLRASDTAELIFEDCEIPEENLLGKLG--EGFVDSMRI- 251 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD +S++ + + +A ++ Y + R G + + ++ +AD+A ++ AA Sbjct: 252 --LDGGRISIAALSLGIARGALDCSLKYVKERRQFGKAIAEFQGIQWKLADMATELDAAR 309 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ R A D + E++ A++ A ++A + EA++ GG G+I++ Sbjct: 310 LLTQRAAVLKDAGNKVTRESSMAKLYA-------SEVAVRICDEAVQLHGGYGFIKDYPA 362 Query: 431 ARHYRE 436 ++YR+ Sbjct: 363 EKYYRD 368 >gi|300771493|ref|ZP_07081368.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300761482|gb|EFK58303.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 592 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 56/294 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257 LTE G+D + + + ++G Y ++G K W + +D FI+ A+++ + F+ Sbjct: 146 LTEPNSGSDANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDKNLTAFI 205 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V + G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 206 VEKDF-----GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILN 260 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358 + I L +A + S R L +AI YA R + + P+ ++ Sbjct: 261 IGR---------IKLGAATIGSS--RGVLTQAIKYANER-----VQFNLPISKFGAIRYK 304 Query: 359 IADIALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 IA+ A+ + A + ++R +A DEAK++ + I I K W + Sbjct: 305 IAEAAIRLFAVESATYRAGQNIDDAYDALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSE 364 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 M V+ E ++ GG GY + + R YR+S N I G+ L V+++L K Sbjct: 365 MLDYVVDEGVQIYGGMGYSADAPMERAYRDSRINRIFEGTNEVNRLLVVDMLLK 418 >gi|239983661|ref|ZP_04706185.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291455471|ref|ZP_06594861.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291358420|gb|EFE85322.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 382 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+T++ + DG + L+G K F+S + + ++++A+ G G + Sbjct: 125 LTEPGAGSDAAALTTRAVRERDG-WALTGVKQFISGAGAAQVYVVMARTGGE-GAEGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313 L D G+ + + K+G + T ++ G LLG ++ + + Sbjct: 183 FLVDKDDPGVTFGPNERKMGWNAQPTRQVILDGARLPAGRLLGREGEGFRIAMNGLNGGR 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G R +L ++ + R G L+D ++ +AD+A ++AAA AL Sbjct: 243 LGI----AACSLGGARSALDRSLAHLADREAFGTRLLDAQALRFRLADMATELAAARALV 298 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + D+ +A Y MA K + +V +A++ GG GY+ E I + Sbjct: 299 QQAAQALDQGDP---QAPYLCAMA---KRFATDTGFSVADQALQLHGGYGYLSEYGIEKI 352 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL GS M Sbjct: 353 VRDLRVHQILEGSNEIM 369 >gi|227536382|ref|ZP_03966431.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227243758|gb|EEI93773.1| acyl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 592 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 56/294 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257 LTE G+D + + + ++G Y ++G K W + +D FI+ A+++ + F+ Sbjct: 146 LTEPNSGSDANSGRTSAKLNAEGTHYIINGQKMWITNGGFADIFIVFAKIDDDKNLTAFI 205 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V + G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 206 VEKDF-----GGITMNPEEHKLGIKGSSTRQIFFNDCAVPVENMLSDRENGFKIAVNILN 260 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358 + I L +A + S R L +AI YA R + + P+ ++ Sbjct: 261 IGR---------IKLGAATIGSS--RGVLTQAIKYANER-----VQFNLPISKFGAIRYK 304 Query: 359 IADIALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 IA+ A+ + A + ++R +A DEAK++ + I I K W + Sbjct: 305 IAEAAIRLFAVESATYRAGQNIDDAYDALVAGGMDEAKAKLKSVEQFAIECAIIKVWGSE 364 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 M V+ E ++ GG GY + + R YR+S N I G+ L V+++L K Sbjct: 365 MLDYVVDEGVQIYGGMGYSADAPMERAYRDSRINRIFEGTNEVNRLLVVDMLLK 418 >gi|226314482|ref|YP_002774378.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] gi|226097432|dbj|BAH45874.1| probable acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] Length = 592 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 32/301 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D + +DG Y L+G K W ++ +D FI+ A+++G + F+V Sbjct: 149 LTEPGSGSDALGAKTTATLSADGTHYILNGEKQWITNAGFADVFIVYAKIDGEKFTAFIV 208 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G+ + + K+G + ++T + + LLG+ G V IL Sbjct: 209 ERTFP-----GVSFGPEEKKMGIKCSSTRTVILQDVPVPVNNLLGE--PGRGHVIAFNIL 261 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 A+ +V + ++ A +YA+ R + + P++K +A++A+ AA + Sbjct: 262 NVGRYKLAVGAVGSSKKAVELATNYAKERKQFKTPIANFPLIKNKLANMAVKTYAAESSV 321 Query: 374 FRLANSFDEAKSRSEEAA------------YARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +R FD A +R E A YA I I K + ++ + E ++ GG Sbjct: 322 YRTVGLFDTALTRLGEKADDGAEVAKAIADYA-IECSINKVFATEVLDYCVDEGVQIHGG 380 Query: 422 SGYIEERSIARHYRESPANSILLGSG--NAMVL--DVLNLLEKGTNLFEQLFSTLEQDLG 477 G++ E I YR+S N I G+ N M++ ++ KG Q S+L+ DL Sbjct: 381 YGFMSEYEIENMYRDSRINRIFEGTNEINRMLIPDTLVKKAMKGELPLMQAASSLQADLM 440 Query: 478 S 478 S Sbjct: 441 S 441 >gi|330963775|gb|EGH64035.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 600 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + DG Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADDGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L + G N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNYDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L + + +I + L + ++ SG SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLTYMFQMMNEARIGVGLGAVMLGYSGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|330502981|ref|YP_004379850.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328917267|gb|AEB58098.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 382 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 19/262 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 + L +TE GG+D+A + ++ + DG Y ++G K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRA--VRDGEHYRINGSKTFITSGVRADYYTVAVRTGGEGFG 182 Query: 257 LVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 V LL E G+P G R K+G ++ T EL F + L+G N + Sbjct: 183 GVSLLLVEKGTP-GFSVGRKLKKMGWWASDTAELFFDDCKVPVENLIGVENAGFACIMAN 241 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L AIM+ +++L E++ +AR R G + V+K +A++A + + Sbjct: 242 FQSERLSLAIMANMTAQLALEESMKWARERQAFGKPVGKFQVLKHRLAEMATQLEVSREF 301 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A +S +E + A K + +A + +A++ +GG GY+ E + R Sbjct: 302 TYRQAAQMAAGRSVIKEISMA-------KNFATDIADRLTYDAVQIMGGMGYMRESLVER 354 Query: 433 HYRESPANSIL-LGSGNAMVLD 453 YR+ N IL +G G +++ Sbjct: 355 LYRD---NRILSIGGGTREIMN 373 >gi|319902924|ref|YP_004162652.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides helcogenes P 36-108] gi|319417955|gb|ADV45066.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides helcogenes P 36-108] Length = 568 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKREGGVNVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIQRERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|257485734|ref|ZP_05639775.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627365|ref|ZP_06460319.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648079|ref|ZP_06479422.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 2250] gi|320321712|gb|EFW77810.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. B076] gi|320331464|gb|EFW87404.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. race 4] gi|330880908|gb|EGH15057.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. glycinea str. race 4] gi|330890641|gb|EGH23302.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. mori str. 301020] gi|330986890|gb|EGH84993.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012017|gb|EGH92073.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 393 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|289582554|ref|YP_003481020.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289532107|gb|ADD06458.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 387 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 51/311 (16%) Query: 142 LMAQLEAGHLMSPSVTSASMVALM------TTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 LM +LEAG S+ S +M + ++W PK+ E Sbjct: 77 LMQELEAGDSGLRSMASVQGALVMYPIHAYGSEEQKEEWLPKLGQGE------------- 123 Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----V 249 A+G GLTE G++ + + + + DG Y L+G K W +SP+SD I+ A+ Sbjct: 124 -AVGCFGLTEPEHGSNPSGMETYAEADGDG-YVLNGSKTWITNSPISDVAIVWARDRSSE 181 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + V FLV + +G+ ++ K+ R++ T E+ +N +L ++ Sbjct: 182 DNPVRGFLV-----ETDRDGVSTNKITEKLSLRASITGEIGLNNVHVPEENVLPGVSGMK 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 GP+ + Y A ++ R + EA YA+ R GG + + +R +A++A I Sbjct: 237 GPLSCLTQARY-GIAWGAIGAARDAFEEARQYAQDREQFGGPIGRFQLQQRKLAEMATQI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAP----ITKYWCCKMAPAVIAEAMECIGGS 422 A L++RLA E K R + M P ++K +MA A E +GG+ Sbjct: 296 TLAQLLAYRLA----ELKERGD-------MQPHHVSLSKRNNVRMARDQTRVAREMLGGN 344 Query: 423 GYIEERSIARH 433 G + S RH Sbjct: 345 GITTDYSPMRH 355 >gi|319763886|ref|YP_004127823.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317118447|gb|ADV00936.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 549 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 38/287 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 + +TE G+D+A + + + ++G + L+G K W + + +++A+ + G Sbjct: 270 IAMTEPDFGSDVAGLQLKATR-AEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHR 328 Query: 254 GC--FLVPRLLEDG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 G LV + +G G + R IG R + +L F N FL+ D N+ Sbjct: 329 GLSLLLVEKPAFEGHEFAVAQEGGGTLHGRAIPTIGYRGMHSFDLVFEN---FLVPDENL 385 Query: 305 STGPVEDMKILIYLDSAIM---------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G K + + +M ++ MR ++ AI YA R V G L + Sbjct: 386 VGGDAGLGKGFYFTMTGMMGGRMQTAGRALGVMRAAVRAAIRYAGDRQVFGAPLASYQLT 445 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + IA +A A L++ +A D R E A + K C+ A V EA Sbjct: 446 QVKIAAMAARFVACRWLAYDVARLLDAGGGRME--------ASLVKLLACRSAELVTREA 497 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEK 460 ++ GG GY EE +++R++ ++ SI G+ + L V+ +LLE+ Sbjct: 498 LQIHGGMGYAEETAVSRYFVDARVLSIFEGAEETLALKVIARSLLEQ 544 >gi|239930100|ref|ZP_04687053.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291438439|ref|ZP_06577829.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291341334|gb|EFE68290.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 608 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ L D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKSAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATAL-----SFRLANSFDEAKSRSEEAAYA--RIMAPI 399 P ++R++ AL S + A EA A +A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASIQDAIQVKEANGEDASADHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + A +A++++ GGSG+++E I ++ R+S +++ G+ Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447 >gi|254392883|ref|ZP_05008051.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|326440112|ref|ZP_08214846.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197706538|gb|EDY52350.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 393 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255 L+E G+D A++ ++ + DG + ++G K W ++D + +LA+ G + Sbjct: 133 LSEPAAGSDAASLRTR--AVRDGEDWVITGTKAWITHGGVADFYTVLARSGGEGSRGITA 190 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G GL + K+G + + T +L F G + D + I Sbjct: 191 FLVP-----GDAPGLTAAAPEKKMGMKGSPTAQLHFD---GVRVPDTRRIGEEGQGFTIA 242 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDS + ++ V +A EA+ YA R G + D ++ +AD+A I A Sbjct: 243 LSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGLRFLLADMATRIEAG 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +L A D+ S EAA A K +C A +V +A++ +GG GY + Sbjct: 303 RSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDAVQVLGGYGYTADFP 355 Query: 430 IARHYRESPANSILLGS 446 + R RE+ I+ G+ Sbjct: 356 VERLMREAKVLQIVEGT 372 >gi|46198546|ref|YP_004213.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus HB27] gi|46196168|gb|AAS80586.1| acyl-CoA dehydrogenase, short-chain specific [Thermus thermophilus HB27] Length = 378 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 39/253 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255 LTE G+D A++ ++ ++ D Y L G K F+S + +++ F++ A+ + G C Sbjct: 120 LTEPEAGSDAASLKTRARREGD-FYVLEGQKTFISHANVAEVFLVFAKTDPEKGAKGITC 178 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----E 310 FLV R +G+ LK K+G R+ ++T L + V V E Sbjct: 179 FLVER------GDGVKTSPLKGKLGLRA--------ADTGMVFLDGVRVPKDRVLGKEGE 224 Query: 311 DMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +I L LD+ +S++ V L + ++ YA R G + +++ +A + L Sbjct: 225 GFRIALSTLDTGRISLAAGAVGLMQRALDLSLAYAGERKQFGKPIAQFQLVQEHLAAMKL 284 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D+ AA L++R A + + + EA+ A++ A + A V A++ GG G+ Sbjct: 285 DLEAARLLTYRAAWKKVKGEPYTLEASLAKLFA-------SEAANRVAYRAIQVHGGYGF 337 Query: 425 IEERSIARHYRES 437 EE +AR YR++ Sbjct: 338 FEEYEVARLYRDA 350 >gi|26988940|ref|NP_744365.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24983754|gb|AAN67829.1|AE016414_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440] Length = 375 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 28/271 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLATGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGSKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G+ G F+VP SP G R+++K+G ++ T ++ F N + L Sbjct: 170 TDPEAGKRGISAFIVPT----DSP-GYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLG 224 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKR 357 E KI L L+ + ++ V +A A YA R G LI+ + Sbjct: 225 AEG---EGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAF 281 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A I+ A + A D + A + A + K + +MA V ++A++ Sbjct: 282 RLADMATKISVARQMVLHAAALRDAGRP-------ALVEASMAKLFASEMAEKVCSDALQ 334 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGN 448 +GG GY+ + + R YR+ I G+ + Sbjct: 335 TLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365 >gi|294811499|ref|ZP_06770142.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294324098|gb|EFG05741.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 408 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGC 255 L+E G+D A++ ++ + DG + ++G K W ++D + +LA+ G + Sbjct: 148 LSEPAAGSDAASLRTR--AVRDGEDWVITGTKAWITHGGVADFYTVLARSGGEGSRGITA 205 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G GL + K+G + + T +L F G + D + I Sbjct: 206 FLVP-----GDAPGLTAAAPEKKMGMKGSPTAQLHFD---GVRVPDTRRIGEEGQGFTIA 257 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDS + ++ V +A EA+ YA R G + D ++ +AD+A I A Sbjct: 258 LSALDSGRLGIAACAVGIAQAALDEALAYAAGRRQFGRPIADFQGLRFLLADMATRIEAG 317 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +L A D+ S EAA A K +C A +V +A++ +GG GY + Sbjct: 318 RSLCLAAARRRDQGLPFSREAAMA-------KLFCTDAAMSVTVDAVQVLGGYGYTADFP 370 Query: 430 IARHYRESPANSILLGS 446 + R RE+ I+ G+ Sbjct: 371 VERLMREAKVLQIVEGT 387 >gi|254712074|ref|ZP_05173885.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1] gi|254715144|ref|ZP_05176955.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|261216854|ref|ZP_05931135.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|261319721|ref|ZP_05958918.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1] gi|260921943|gb|EEX88511.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|261292411|gb|EEX95907.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1] Length = 384 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + Y R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYTLDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|307329464|ref|ZP_07608625.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306884873|gb|EFN15898.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 608 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 87/372 (23%), Positives = 167/372 (44%), Gaps = 56/372 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S +SD I +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAAQQEDGSWHIEGVKRFITSGEHDLSDNIIHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP+ D G NG+ +++K+G R++ T EL F G+LLGD Sbjct: 224 KGLSLFVVPKYDFDWDSGELGERNGVYATNVEHKMGLRASNTCELTFGADHPAKGWLLGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 + G + KI+ + + +++ + A+ YA+ R V G Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALEYAKER-VQGPDLAAFTDKTAPR 340 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYA-----RIMAPI 399 + P ++R++ AL A+ DE K + E A A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGLRALVLYTASVQDEILVKEAAGEDASAVSRLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------ 453 K + + A +A++++ IGGSGY++E + ++ R++ +++ G+ D Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAIQGQDYFFRKI 460 Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKG--LARFLTEKIALA 511 V + + T + E++ L + ++G + + RD ++ D + LT+ A Sbjct: 461 VRDQGQALTVVSEEIKKFLAE---AAGGEELEAARDQLAQAAVDLEAIVGAMLTDLAATE 517 Query: 512 SSAAALYRAGMN 523 +++Y+ G+N Sbjct: 518 QDVSSIYKVGLN 529 >gi|284041703|ref|YP_003392043.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283945924|gb|ADB48668.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 382 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 52/308 (16%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 + L + +DW P++ + E +G GLTE G+D + ++ Sbjct: 98 IYLFGSEEQKRDWLPRLTAGER--------------LGAFGLTEPEAGSDAGNVQTRA-T 142 Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSP---N 268 + +G + ++G K F+++ +D +++ V G + LVP +G+P Sbjct: 143 LDNGEWVVNGAKQFITNAGTDISGCVVITAVTGTDDRGRKEISNILVP----NGTPGYEQ 198 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 G Y+ K+G ++ T L F++ + D V + L LD + V+ M Sbjct: 199 GTPYR----KMGWNASDTRPLTFTDCR--VPEDQLVGPRGAGFKQFLRVLDIGRIGVAAM 252 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 V LA EA+ Y++ R G + ++ +AD+A ++AAA L++ A D Sbjct: 253 GVGLAQGALDEAVKYSKERKAFGQPISKFQAIQGKLADVATELAAARLLTYNAAFLKDRG 312 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + S AA A++ ++A EA++ GG GYIEE + R YR+ A + Sbjct: 313 RDFSLTAAQAKLK-------TGRLAVRASEEAVQIHGGYGYIEEYPVCRFYRD--AKILT 363 Query: 444 LGSGNAMV 451 +G G V Sbjct: 364 IGEGTDEV 371 >gi|282880130|ref|ZP_06288850.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281306003|gb|EFA98043.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 575 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 34/329 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKNDCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVDVRHIENKLGIHGSPTCELVYKNAKAELCGSTRL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V +A EA+ YA+ R G +I+ P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGVAQEAYNEAVAYAKERQQFGQPIIEFPAVYDMLSRMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ A D K+ R+E Y R+ P+ K + A Sbjct: 347 SLLYQTARYVDIYKALEDIQRDRKLTPEERAEMKKYTRLADAFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQ 467 +A+ GGSG+I E R YR++ SI G+ V+ + + GT + EQ Sbjct: 407 DAISVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQMQVVAAIRYIMNGTYLNIMREMIEQ 466 Query: 468 LFSTLEQDLGSSGKKVITILRDSISLCKE 496 S L + +++ +SI+ K+ Sbjct: 467 PVSEALTPLRQKVEAMLSQYEESIAFVKD 495 >gi|149924251|ref|ZP_01912624.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] gi|149814876|gb|EDM74441.1| acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] Length = 382 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 20/253 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D AA + + D Y ++G K W + P +D I++ + G + Sbjct: 125 LSEPDAGSDAAAQKTVAVRDGDH-YVITGVKNWITNGPQADTGILMLMTDKAKGHRGISA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 + D + G+ +K+G R++ + ++ F S G V+ ++ + Sbjct: 184 FIIDMNGEGVSRGPKDDKLGIRASHSCQIFFTDHRVHESQRLGNEGDGFKVAMSTLDCGR 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I A ++ R + A YA R G + D + +AD+A +I AA L+ Sbjct: 244 IGI----AAQALGIARGAFEAAARYATERKTFGKAIADHQAISFMLADMATEIDAARLLT 299 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A K S E+A ++MA ++A V A++ GG+GY+ E + R Sbjct: 300 YRAAALKAAGKRHSVESAMCKLMA-------SEVANKVAKNAVQIFGGNGYVSEYPVERA 352 Query: 434 YRESPANSILLGS 446 YR++ I G+ Sbjct: 353 YRDAKITEIYEGT 365 >gi|121596068|ref|YP_987964.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42] gi|120608148|gb|ABM43888.1| isovaleryl-CoA dehydrogenase [Acidovorax sp. JS42] Length = 396 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 K + PK+ S E+ +G L ++E G+D+ ++ + + G Y L+ Sbjct: 116 RKKYLPKLISGEH--------------VGALAMSEPGAGSDVISMKLRAED-KGGYYLLN 160 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K W + P +D ++ A+ E +G V L + G + +K+G R + T E Sbjct: 161 GSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGE 220 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRR 342 L F N + NV G K+L+ LD ++G M+ + + Y R Sbjct: 221 LVFQNV---EVPAENVLGGVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDR 277 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + +++ +AD+ + A + ++ +A + D S + R Sbjct: 278 KQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDMLGS--DHVRQVRKDCASVIL 335 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 WC + A + E ++ GG+GYI E + R +R++ I G+ Sbjct: 336 WCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAKLYEIGAGT 379 >gi|90417337|ref|ZP_01225263.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] gi|90330922|gb|EAS46185.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] Length = 390 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 25/286 (8%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 ++A + +E P A ++ S+AI TE G+D+A +T+ + D Y ++G K Sbjct: 112 NFASEAIKQEVAPPVLAGTKRISLAI----TEPGAGSDVAHLTTTARLDGDH-YVVNGSK 166 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +++ M+ + A G G V LL G+ L K G + T + F Sbjct: 167 TYITGGMNANWFTTAVRTGGEGAGGVSALLIPADLEGVSRTALDKKQGWWCSDTATIYFD 226 Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHV 344 N L+G N I+ ++ +++S RV L +A+++ R R Sbjct: 227 NVRVPAANLVGQENRGFSV-----IMTNFNAERLAMSASMEAFSRVCLEDAVNWGRERKT 281 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G L D V++ IA++ I + ++ + + + A ++ + T +C Sbjct: 282 FGQRLADHQVIRHKIAEMKQRINSTQCYLNQICAEVQAGREYAGDIALLKVQSSQTMEFC 341 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + EAM+ +GG GY+ + R YRE N+I GS M Sbjct: 342 AR-------EAMQILGGMGYMRGNRVERIYREVRVNAIGGGSEEIM 380 >gi|317121885|ref|YP_004101888.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter marianensis DSM 12885] gi|315591865|gb|ADU51161.1| acyl-CoA dehydrogenase domain-containing protein [Thermaerobacter marianensis DSM 12885] Length = 379 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 42/324 (12%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIF-SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 S ++T A+ V+L TP +F S E AP + GLTE G+ Sbjct: 82 STALTVAAHVSLGCTPLY-------LFGSDEQKARWLAPALRGEYVAAFGLTEPEVGSHT 134 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLLEDG 265 AAI ++ + D + + G K F+++ ++++A V GR G LVPR Sbjct: 135 AAIRTRAVQDGDA-WVIHGTKAFITNGSRADYVVVAAVTDPERGREGISNILVPR----D 189 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 +P +R + K+G ++ T EL F L+G+ + L LD Sbjct: 190 APGWRAVRRYE-KMGLHASDTAELVFDGCRVPLDHLVGERGKG-----HAQFLRTLDGGR 243 Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 + + + V +A+A + YAR R G + ++ +AD+A ++ AA L +R A Sbjct: 244 IGIGALSVGIAQACLDAALEYARYRRQFGRPISKFQAIQFKLADMATELEAARLLVYRAA 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D + EAA A++ A ++A EA++ GG+GY+ + + R+ R+ Sbjct: 304 WLRDRGRPYRREAAMAKLFA-------SELAVRAALEAIQIHGGAGYVRDYPVERYLRD- 355 Query: 438 PANSILLGSGNAMVLDVLNLLEKG 461 A + +G G + + ++ E G Sbjct: 356 -AKLMEIGEGTSEIQRLVIARELG 378 >gi|302342605|ref|YP_003807134.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301639218|gb|ADK84540.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 606 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/394 (21%), Positives = 160/394 (40%), Gaps = 73/394 (18%) Query: 152 MSPSVTS--ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +TS A ++ T + + P+++S ++ T + LTE G+ Sbjct: 127 MYPLLTSGNARLIEAFGTEADRELFVPRMYSGQWAGT-------------MCLTEPLAGS 173 Query: 210 DIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VG 254 D+ + + D +Y + G K F+S+ D ++LA++EG + Sbjct: 174 DVGWLETSATPDPDSPDKRVYKIKGRKRFISAGNHDLTENIIHLLLARIEGAPHGTKGIS 233 Query: 255 CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 F+VP++ + G PN + +++K+G +AT L F + G LLG+ + Sbjct: 234 LFIVPKIWVEPDGALGRPNDVVCTGIEHKMGIHGSATCALHFGGSDQCRGILLGEPHTGM 293 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD----- 361 + M + + +M ++ + S +A +R V G D+ + I + Sbjct: 294 AKMFQMMNEARVGTGLMGLA-LSASAYDAARTWAKRRVQGPPFTDRRGQRVKIINHEDVR 352 Query: 362 -IALDIAAAT-ALSFRLANSF---------DEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 + L++ A T A+ +A ++ +A +R + A + P+ K +C + Sbjct: 353 RMLLNMKAGTEAMRALIAKTYYLMDVARFEPDAAARQKAAGLVELYTPLVKAYCTDFGFS 412 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 + EA++ GG+GY ++ R+ SI G+ LD++ Sbjct: 413 LTREALQVFGGAGYCNGFPAEQYVRDCKILSIWEGTNYIQSLDLVG-------------- 458 Query: 471 TLEQDLGSSGKKVIT-ILRDSISLCKEDKGLARF 503 + LG G V L D + C ++ G A F Sbjct: 459 ---RKLGLEGGAVFQGALADIQTFCADNAGDADF 489 >gi|284165847|ref|YP_003404126.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284015502|gb|ADB61453.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 378 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 40/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 L+E G++ A + ++ + D Y ++G K W + + +I+ A+ + V Sbjct: 120 FALSEPHAGSNPAEMATEASREGDE-YVINGEKQWITNGQRAGVYILFAKTDRDDPNSVT 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312 FLVP G +GL ++K+G R++ T L F D+ + PVE+ Sbjct: 179 QFLVP-----GDVDGLSVGEKEDKLGLRASDTTSLTFD--------DVRI---PVENRLT 222 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 + L +A ++G R+++A EA+ Y++ R G + + ++ +A Sbjct: 223 EEGKGLSAAFHILTGGRIAIAAQSVGLAQCALDEALAYSQEREQFGDPIAEIQSIRHKLA 282 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A AA +L+ A + E + A + A + KY+ + A V EA++ G Sbjct: 283 EMATRTKAARSLTRHAARTRHETDADGTGA----LEASMAKYFASETAMFVTNEAVQIHG 338 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ E + R YR++ I G+ Sbjct: 339 GYGYVTEGEVERLYRDAKITEIYEGT 364 >gi|163854671|ref|YP_001628969.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163258399|emb|CAP40698.1| acyl-CoA dehydrogenase [Bordetella petrii] Length = 382 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 33/252 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE-----GR 252 LTE G+D A++ + + DG Y L+G K F++ +P++ F ++A+ Sbjct: 122 FALTEPDAGSD--AMSLRTSAVRDGDHYVLNGTKRFITNAPVAGLFSVMARTAPERKASS 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + CFLV + G+P GL + K+G T ++ F N LLG TG Sbjct: 180 ISCFLV----DAGTP-GLTLGKPDKKMGQAGALTCDVVFDNCRVPATALLGG-EEGTGFR 233 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 M++L D + +S + V +AE A+ YA R G + + +++ IAD Sbjct: 234 TAMRVL---DKGRLHISALCVGIAERLVRDAVKYATERKQFGQPIAEFQLVQAMIADSQA 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA ++ A D ++ + EAA K + +M V A++ GG+GY Sbjct: 291 ELYAARSMVLDAARKRDRGENTTLEAA-------CCKLYATEMVGRVADRAVQIHGGAGY 343 Query: 425 IEERSIARHYRE 436 I E ++ R YR+ Sbjct: 344 ISEYAVERFYRD 355 >gi|229030057|ref|ZP_04186121.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] gi|228731227|gb|EEL82145.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1271] Length = 569 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A D A S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDAAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|108797090|ref|YP_637287.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119866175|ref|YP_936127.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108767509|gb|ABG06231.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119692264|gb|ABL89337.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 588 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 41/304 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + L+E + G+ +A IT++ + DG Y L G K ++S + + Sbjct: 152 PMLAGRFSGTMALSETQAGSSLADITTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNL 211 Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292 +LA++ G + F+VP+ L EDGS N + L +K+G R L F Sbjct: 212 VLAKIPGGPPGTKGISLFVVPKYLVAEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGE 271 Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 G+L+G+ + + M L + +V+ +++ YAR R Sbjct: 272 GVFNPGGEPGAVGYLVGEPHRGITYMFRMMNEARLGVGMGAVALGYTGYLKSVKYARERP 331 Query: 344 VSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + P +KR + + A AL+ A D ++ Sbjct: 332 QGRPVTAKDPATPQVPIIEHADVKRMLLAQKSYVEGALALALYCARLVDLGDNQD----L 387 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 I+ P+ K W + + A++ GG GY E + +HYR++ N I G+ L Sbjct: 388 LDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSL 447 Query: 453 DVLN 456 D+L Sbjct: 448 DLLG 451 >gi|296137158|ref|YP_003644400.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295797280|gb|ADG32070.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 375 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ 248 P+ + LTE + G+D + + + + D Y L G K F++S + I+LA Sbjct: 111 PVARGEWIGAFALTEPQAGSDASNLRATARLEGDH-YVLDGVKQFITSGKNGQVAIVLAA 169 Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296 + G+ G FLVP G +RL++K G ++ T ++ F N G Sbjct: 170 TDRAAGKKGISAFLVPT-----DTPGYIVERLEDKTGQSASDTAQIRFEGCRVSAVNRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YAR R G + + ++ Sbjct: 225 AEGEGYKIALSGLEGGRIGI----AAQSVGMARAAFEAALRYARERTAFGKPIAEHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A+ I AA L + A+ D +EAA A++MA +MA V + A+ Sbjct: 281 FRLAEMAMQIEAARQLLWHAASLKDAGLPCLKEAAMAKLMAS-------EMAERVCSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R +R+ I G+ + Sbjct: 334 QIHGGYGYVADFPVERIWRDVRVCQIYEGTSD 365 >gi|289581966|ref|YP_003480432.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289531519|gb|ADD05870.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 381 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256 L+E G+D+ A+ + +K D Y L+G K W + +SD + A+ + G Sbjct: 125 LSEAGAGSDVPAMETTAEKDGD-EYVLNGGKLWISNGSVSDTVTVFAKTDADAGNKGISS 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 V R ED +G + + K+G++ T EL F + LLG G V+ +K Sbjct: 184 FVVRPEED---DGFIVENTEEKLGDKGCPTAELRFDDLRIPENRLLG--AEGDGFVQALK 238 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + A S+ R + EA YA R G + + +K +AD+ I AA Sbjct: 239 TLNGGRITIAARSIGIARAAFDEARDYAGEREQFGQPIGEFQSIKHKLADMDTKIQAARM 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A+ ++ ++AA A++ + +++ V E ++ GG GY ++ Sbjct: 299 LMHKAADKKIRGENYIKDAAQAKL-------YASEISREVANEGIQIHGGYGYTKDFPAE 351 Query: 432 RHYRESPANSILLGS 446 R YR++ N I G+ Sbjct: 352 RFYRDAKLNEIYEGT 366 >gi|187477404|ref|YP_785428.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N] gi|115421990|emb|CAJ48512.1| glutaryl-CoA dehydrogenase [Bordetella avium 197N] Length = 397 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 27/245 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA-----QVEGRV 253 GLTE G+D A + ++ KI DG Y LSG K W +SP++D F++ A + +G++ Sbjct: 137 FGLTEPNHGSDPAGMETRAVKI-DGGYKLSGAKMWITNSPIADVFVVWAKCVGGEFDGKI 195 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F++ + ++ GL + K+G R++ T E+ + D + G Sbjct: 196 RGFILEKGMK-----GLTAPAIHGKVGLRASITGEIVMDEV---EISDAQMMPGVSGLRG 247 Query: 314 ILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIAA 368 L+SA ++ + AEA H AR+ R G L ++++ +AD+ +I Sbjct: 248 PFTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITL 307 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A RL DE + E + I K C A + A + +GG+G +E Sbjct: 308 ALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARVARDMLGGNGISDEF 360 Query: 429 SIARH 433 +ARH Sbjct: 361 GVARH 365 >gi|261404135|ref|YP_003240376.1| acyl-CoA dehydrogenase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261280598|gb|ACX62569.1| acyl-CoA dehydrogenase domain protein [Paenibacillus sp. Y412MC10] Length = 596 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 25/264 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + DG Y L+G K ++++ +D FI+ A+++G F+V Sbjct: 152 LTEPTSGSDALGAKTTARLSDDGEYYILNGSKLYITNAGFADIFIVYAKIDGEHFTAFIV 211 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + +E G + K+G + ++T L F + LLG++ ++ + Sbjct: 212 EKEME-----GFTLGPEEKKMGIKGSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNI 266 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A +V + S+ + YA R + P+M++ +A++ + ++ +R Sbjct: 267 GRYKLAAGTVGAAKESIELSAKYANTRKQFDTPISQFPLMRKKLAEMNITAFVMESMVYR 326 Query: 376 LANSFDEAKS----RSEEAA---------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A DEA SE+A YA I I K +C + V EA++ GG Sbjct: 327 TAGLLDEAMQDIDYNSEDAGIHSAAAISDYA-IECSINKVFCSEGLDNVADEAVQIHGGY 385 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI+E + R YR+S N I G+ Sbjct: 386 GYIQEYKVERIYRDSRINRIFEGT 409 >gi|94311587|ref|YP_584797.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93355439|gb|ABF09528.1| Glutaryl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 397 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 18/262 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K++ G Y L+G K W + Sbjct: 115 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVAGG-YELTGAKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 SP++D F++ A++ G G + + + GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLMGDDGKEAIRGFILEKGWKGLSAPAIHGKVGLRTSITGEIVLDQVF- 232 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351 + + N+ G L+SA ++ + AE A Y R G L Sbjct: 233 --VPEENIMPGVSGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAA 290 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++++ +AD+ +I RL DE + E + I K C + + Sbjct: 291 TQLVQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDI 343 Query: 412 IAEAMECIGGSGYIEERSIARH 433 A + +GG+G +E + RH Sbjct: 344 ARVARDMLGGNGISDEFGVIRH 365 >gi|255320472|ref|ZP_05361653.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262378367|ref|ZP_06071524.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255302444|gb|EET81680.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262299652|gb|EEY87564.1| glutaryl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 407 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D +++++ +K+ G Y LSG K W + Sbjct: 123 FGSEEQKQKYLPKLATGEFIGCFGLTEPDHGSDPGSMSTRAKKVEGG-YRLSGAKMWITN 181 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ +G VG + +LE G GL + K+G R++ T E+ N Sbjct: 182 SPIADVFVVWAKEVSTDGNVGP-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 239 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 240 VFVPEENAFPEVQGLRGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 293 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 294 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 346 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 347 GKALDIARLARDMLGGNGISDEFGVARH 374 >gi|163796872|ref|ZP_02190829.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199] gi|159177861|gb|EDP62410.1| isovaleryl-CoA dehydrogenase [alpha proteobacterium BAL199] Length = 390 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/253 (21%), Positives = 112/253 (44%), Gaps = 16/253 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L ++E G+D+ ++ ++ +K D G W + P +D ++ A+ + + Sbjct: 131 LAMSEPGAGSDVVSMRTRAEKKGDRYIVNGGKMWITNGPTADVVVVYAKTDPDANQHGIT 190 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 L + G + +K+G R + T EL F + +LG +N G V+ + + Sbjct: 191 AFLIEKGMKGFSIAQKLDKLGMRGSDTGELVFEDVEVPEENVLGQIN---GGVKVLMSGL 247 Query: 317 YLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A+++ M+ + I Y R G + + +M+ +AD+ + + AA + Sbjct: 248 DYERAVLAAGPTGIMQACMDVVIPYVHERKQFGRSIGEFQIMQGKLADMYVTMNAAKSYV 307 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A + D + ++AA A + A W + EA++C+GG+GY E R Sbjct: 308 YTVAKACDRGEVTRKDAAGAILYAAEKATW-------MTLEAIQCLGGNGYTNEYPTGRL 360 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 361 LRDAKLYEIGAGT 373 >gi|146299692|ref|YP_001194283.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154110|gb|ABQ04964.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae UW101] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 27/280 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F E P T+ IG GLTE G+D + + K D + ++G K F++ Sbjct: 101 FGNEEQKKKYLPKLATAEFIGAWGLTEHNTGSDAGGMNTTAVKDGD-FWIINGAKNFITH 159 Query: 238 PMSD--AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +S A +++ E + +LE G G + +NK+G R++ T EL F Sbjct: 160 AISGDVAVVIVRTGEKGDSKGMTAFVLEKGMA-GFSSGKKENKLGMRASETAELVFD--- 215 Query: 296 GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 G + D N V G V+ MKIL D +S+ + + +++ A+ Y++ R+ G Sbjct: 216 GCRVPDANRLGEVGQGFVQAMKIL---DGGRISIGALSLGISKGAYEAALKYSKERYQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + + + +AD+A +I A+ L + A + K + A A++ A C K Sbjct: 273 QPISNFQGISFKLADMATEIEASELLLHKAAYLKQQHKPVTTSGAMAKMYASEA---CVK 329 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A EA++ GG GY ++ + + YR+S +I G+ Sbjct: 330 IAN----EAVQIHGGYGYTKDFPVEKFYRDSKLCTIGEGT 365 >gi|114569090|ref|YP_755770.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris MCS10] gi|114339552|gb|ABI64832.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10] Length = 388 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 18/267 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLV 258 + ++E G+D+ ++ + K +G Y ++G K F+++ S FI++ A+ + G V Sbjct: 132 IAMSEPGTGSDLQSVKTTAIKDGNG-YRINGQKTFITNGGSANFIIVVAKTDPEKGYDGV 190 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 L+ E G RL +K+G ++ T EL F + + LLG G ++ M+ Sbjct: 191 SLLMVETDKVEGFRRGRLLDKVGMKAQDTAELFFEDVWVPADALLGQ-EEGQGFIQLMQQ 249 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L A+ V M+ +L E I+Y + R G +P++K L A Sbjct: 250 LPQERLQIAVQGVGAMKRALHETINYTKEREAFG-----RPILKFQNTQFKL---AECKT 301 Query: 373 SFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 LA F R + A + KYW + V+ E ++ GG GY+ E IA Sbjct: 302 KATLAEVFTHHCSERLMKGELDAATASMAKYWVSEAQNEVMDECVQLHGGYGYMREYPIA 361 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458 + + +S I G+ M L + L Sbjct: 362 KMWTDSRVQRIYGGTNEIMKLLIARTL 388 >gi|326564442|gb|EGE14669.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis 103P14B1] Length = 608 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 52/331 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFMNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406 ++ + AL + L+ F + ++ E E +A ++ PI K + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTE 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497 + LGS G+ + + C+E+ Sbjct: 453 ------RKVLGSQGRMLANFTQIIHQFCQEN 477 >gi|149191207|ref|ZP_01869464.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1] gi|148834956|gb|EDL51936.1| putative acyl-CoA dehydrogenase [Vibrio shilonii AK1] Length = 384 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 24/259 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + + D Y ++G K F+S +D +++A+ G G + Sbjct: 124 LTEATAGSDAASLLTTATRQDDS-YIINGSKAFISGGGETDVLVVMART-GETGAKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI- 316 + +G+ Y R + K+G S T + F N + LG+ G MK L Sbjct: 182 FVVPAHCDGISYGRKEPKMGWNSQPTRAITFDNVVVPATYRLGE--EGQGFTFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL--- 372 ++ A SV + +L +A Y R G L ++ +AD+A ++ AA + Sbjct: 240 GRINIATCSVGTAQHALNQAAQYLHERKQFGRSLSQFQALQFKLADLATELVAARQMVRL 299 Query: 373 -SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +F+L N +A + A A+ A + C ++ GG GYI+E S+ Sbjct: 300 AAFKLDNQHPDATTY---CAMAKRFATDVGFNVCD-------GVLQLFGGYGYIKEYSLE 349 Query: 432 RHYRESPANSILLGSGNAM 450 RH+R+ + IL G+ M Sbjct: 350 RHFRDVRVHQILEGTNEIM 368 >gi|187922466|ref|YP_001894108.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] gi|187713660|gb|ACD14884.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE + G+D +A+ + + D Y L+G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGNVAIVMAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+VP G R+++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DTKGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|70998024|ref|XP_753744.1| isovaleryl-CoA dehydrogenase IvdA [Aspergillus fumigatus Af293] gi|66851380|gb|EAL91706.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus Af293] gi|159126519|gb|EDP51635.1| isovaleryl-CoA dehydrogenase IvdA, putative [Aspergillus fumigatus A1163] Length = 462 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 18/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E G + Sbjct: 197 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGI 255 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F LLG+LN + +++L Sbjct: 256 SAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENLLGELN------KGVRVL 309 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ ++A+ Sbjct: 310 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGAPIAHNQLIQGKLADMYTKLSAS 369 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ A D + + E + + A Y + A +A++ +GG+GYI E Sbjct: 370 RAYTYATARHIDNSAATGEVSIRTQDCAGAILY-AAERATECALDAIQLMGGNGYINEIP 428 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 429 AGRLLRDAKLYEIGAGT 445 >gi|323488555|ref|ZP_08093799.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] gi|323397772|gb|EGA90574.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] Length = 402 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 113/273 (41%), Gaps = 35/273 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA- 247 P K GLTE G+D+AA+ S K D Y L+G K W ++D FI+ A Sbjct: 113 PQAKGEKVGAFGLTEPSAGSDVAAMKSTAVK-KDDHYLLNGQKTWISLCDVADHFIVFAY 171 Query: 248 ---QVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 Q E + F+V R G + +K K G R+ T EL F + LL Sbjct: 172 TGNQAEKHNAISAFIVERTWP-----GFSSKAIKGKHGIRAGNTGELFFEDVKIPIENLL 226 Query: 300 GDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQP 353 G E KI + LD+ +V+ V L ++ Y R+R G + Sbjct: 227 GKEG------EGFKIAMSALDNGRFTVAAGAVGQIMACLEASVSYCRQRQTFGKEIGRHQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++++ IA++ + L +R ++ K + E + A K+ C A Sbjct: 281 LVQQMIANMEAGFQMSRLLVYRAGELKNQGKRNTRETSLA-------KWQACDFAYKAAD 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A + G GY +E ++R+ R S A I G+ Sbjct: 334 DAFQIHGAYGYSDEYPVSRYLRNSKAPVIYEGT 366 >gi|313679826|ref|YP_004057565.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] gi|313152541|gb|ADR36392.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] Length = 582 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 41/269 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258 LTE G+D A + DG Y L+G K F+++ +D FI+ A+++G + F+V Sbjct: 150 LTEPGSGSDALAAKTTATLSEDGKHYVLNGTKQFITNAGFADVFIVFAKIDGEKFTGFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 E G+P GL ++K+G RS++T ++ +L D+ V PVE++ Sbjct: 210 ----EKGTP-GLSLGPEEHKMGIRSSSTRQV--------ILEDVKV---PVENVLGEIGK 253 Query: 313 --KILIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + +V + L E+ YA +R + +K+ +A +A Sbjct: 254 GHKIAFNVLNIGRYKLGAAAVGAAKEVLKESAKYALQRQQFNLPIAKFGAIKQKLARMAA 313 Query: 365 DIAAATALSFRLANSFD-EAKSRSEEA------AYARIMAPITKYWCCKMAPAVIAEAME 417 I AA + ++R D E ++R ++ YA I A I K ++ + E ++ Sbjct: 314 LIYAAESATYRTVGLIDDEIEARGKDQIVDAIEEYA-IEASIIKVLGSEVLDYAVDEGVQ 372 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GYIEE + R YR+S N I G+ Sbjct: 373 IHGGYGYIEEYMVERAYRDSRINRIFEGT 401 >gi|297180741|gb|ADI16949.1| acyl-CoA dehydrogenases [uncultured SAR406 cluster bacterium HF0010_18O13] Length = 632 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 43/311 (13%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLS 229 K W P I S E +A GLTE G+D + G DG Y ++ Sbjct: 167 KKKWLPGICSGE------------KIA-AFGLTEPEAGSDATNSKTTGVLSDDGKHYIVN 213 Query: 230 GHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K F+S+ +D FI+ +++G+ +V E G+P G + + K+G ++TV Sbjct: 214 GQKIFISNGAWADTFIVALKIDGKFSSIVV----EKGTP-GFDIGKEEKKMGMEGSSTVP 268 Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 L F++ LLG + GP + ++ GM + + A+ YA+ R Sbjct: 269 LYFTDCKVPVENLLGKVGDGAGPAFCGLNIGRFKLGASAIGGMMLGMQHAVEYAKSRKAF 328 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS---RSEEAAYAR-------- 394 G + D ++ +A A+ + + + EA + +++ Y + Sbjct: 329 GQSISDFGSIQDKLATSAILTYTLDSTCYSVIGKQTEAINELDKNDPEYYVKQGNTTEQY 388 Query: 395 -IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS------- 446 I K + + A +I + GG G+IEE +A+ YR++ N I G+ Sbjct: 389 IAENSIVKVYGSEAAEELIDHCFQIYGGYGFIEEYPMAQAYRDNRINKIWEGTNEINRML 448 Query: 447 -GNAMVLDVLN 456 G AM+ L+ Sbjct: 449 CGRAMITKALS 459 >gi|289739515|gb|ADD18505.1| isovaleryl-CoA dehydrogenase [Glossina morsitans morsitans] Length = 423 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 29/261 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCF 256 GL ++E G+D+ ++ + ++ D + L+G K W + ++D I+ A+ G Sbjct: 162 GLAMSEPGAGSDVVSMKLKAERKGD-YFVLNGTKFWITNGSVADTLIVYAKTGTGTADKH 220 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMK 313 + + + + G + +K+G R + T EL F DL V + E+ Sbjct: 221 SITAFIIETASEGFSIAQKLDKLGMRGSPTCELVFQ--------DLKVPAKNILGQENKG 272 Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + + A V M+ ++ A YA +R G ++ + +M+ +AD+ Sbjct: 273 VYVLMSGLDIERLVLAAGPVGLMQAAIDIAFEYAHQRKQKGQLIGEFQLMQGKMADMYTT 332 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++A + + +A + D + S++ A + +C + A V EA++ +GG+GYI Sbjct: 333 LSACRSYLYSVARACDSGHNSSKDCAGVIL-------YCAEKATQVALEAIQTLGGNGYI 385 Query: 426 EERSIARHYRESPANSILLGS 446 E S R R++ I G+ Sbjct: 386 NEYSTGRIMRDAKLYEIGAGT 406 >gi|324997990|ref|ZP_08119102.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length = 385 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 30/257 (11%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251 V GLTE G+D +++ ++ + D ++ +SP++D ++ A+ + G Sbjct: 116 VTASFGLTEADAGSDPSSLATRAVRDGDSWVINGSKRYITNSPVADVIMVFARTDPDAPG 175 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302 G FLVPR GL K+G T V + F N G G+ Sbjct: 176 NRGISTFLVPR-----DTPGLSVGPKDLKMGQFGAWTADVHLDDVRVPFENVVG---GEE 227 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLA-EAIHYARRRHVSGGILIDQPVMKRAIA 360 + G + K L + I +V GM L E + YAR R G + +++ +A Sbjct: 228 GIDNGFLTAAKCLAHGRLHIGAVCVGMADRLVHETVEYARTREQGGKPIARFQLVQGLVA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D D A L A SFD+ A A KY+C +M V A++ G Sbjct: 288 DSVTDARAGRGLVLDAARSFDDGTDMVSGPAAA-------KYFCSEMVGRVADRAVQVHG 340 Query: 421 GSGYIEERSIARHYRES 437 G+GY+ ++ R +R++ Sbjct: 341 GAGYMRGVAVERFFRDA 357 >gi|163815116|ref|ZP_02206497.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759] gi|158449525|gb|EDP26520.1| hypothetical protein COPEUT_01272 [Coprococcus eutactus ATCC 27759] Length = 388 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 30/278 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252 GLTE GTD A Q + + DG + L+G K F+++ +D +I++A + GR Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIVEKRGR 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + ++E G+P G + +NK+G ++T EL F++ LLG Sbjct: 181 KMKEISAFIVEKGTP-GFTFGTKENKMGICGSSTYELIFTDCRIPKDALLGQKG------ 233 Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + I ++ LD + ++ + +AE ++Y + R G + + +AD+A Sbjct: 234 KGFNIAMHTLDGGRIGIAAQALGIAEGALETTVNYVKERKQFGRSIAQFQNTQFVLADLA 293 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L ++ A DE +S + + +Y+ + A + K + ++A V + ++ GG G Sbjct: 294 TKIEAAKLLVYKAARKKDEYQSGA-KVSYS-VEAAMAKLYAAEVAMEVTTKCVQLHGGYG 351 Query: 424 YIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLE 459 YI+E + R R++ I G+ MV+ NLL+ Sbjct: 352 YIKEYDVERMMRDAKITEIYEGTSEVQRMVISA-NLLK 388 >gi|23100465|ref|NP_693932.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22778698|dbj|BAC14966.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 30/318 (9%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGT 209 S VT ++ ++L + P IF + K +Q+ + LG L+E G+ Sbjct: 82 STGVTLSAHLSLASWP---------IFKYGTEDQKKNFLQRLATGEALGAYALSEPGAGS 132 Query: 210 DIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268 D+ ++ + ++ + + ++G+K W + ++D +I+ A+ + + + + Sbjct: 133 DVVSMKTTARRDGED-FVINGNKVWITNGGVADIYIVFAKTDTDANHKGISAFIIEKGTE 191 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSG 327 G + + + K+G RS+ T EL F N + N+ E KI + LD ++ Sbjct: 192 GFRFGKKEKKLGIRSSPTTELIFENC---RIPKSNLLGNEGEGFKIAMTTLDGGRNGIAA 248 Query: 328 MRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 V +A+ A YA+ R G + + + +AD+A +I AA L+++ Sbjct: 249 QAVGIAQGALDAASDYAKERQQFGKPIAENQGISFKLADMATEIEAARLLTYQA------ 302 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A S Y + A ++K + +A EA++ GG GY ++ + R+ R++ I Sbjct: 303 AWLESAGLPYGKASA-MSKLFAGDVAMKSTVEAVQVFGGYGYTKDYPVERYMRDAKITQI 361 Query: 443 LLGSGNAMVLDVLNLLEK 460 G+ L + ++ K Sbjct: 362 YEGTNEVQRLVIGRMVTK 379 >gi|322692414|gb|EFY84327.1| acyl-CoA dehydrogenase [Metarhizium acridum CQMa 102] Length = 433 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 30/295 (10%) Query: 143 MAQLEAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 M+++E G L S A + T + W P +F+RE + Sbjct: 111 MSRVEGGVGIALAGASAIGAPPIVNCGTEEQKRKWLPGLFTRETN-------------FS 157 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257 LG+TE GG+D+A I + K DG Y ++G KW +P + + A GR G Sbjct: 158 LGITEPSGGSDVARIKTTADKTPDGSFYIVNGVKKWITGTPWA-THMTTAVRTGRPGMKG 216 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVED 311 V L+ G+ +Q+++N N A+ V++ N G + Sbjct: 217 VSLLVIPMDSPGIVHQKIQNSGQNAGGASFVYLENVKVPVENLLGGENQGFMIIMKNFNK 276 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + L+ + + R LA + YA RR G LI+ V++R ++++A I A A Sbjct: 277 ERFLLTVGCNRKA----RSCLAMSFQYAMRRETFGKPLIENQVIRRKLSEMAHRIEAHWA 332 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +LA + E+ A +A + K ++ EA + GG+GY++ Sbjct: 333 WLEQLAYHIKCSDLGWEDPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYMK 386 >gi|218263057|ref|ZP_03477302.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii DSM 18315] gi|218222990|gb|EEC95640.1| hypothetical protein PRABACTJOHN_02983 [Parabacteroides johnsonii DSM 18315] Length = 568 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWLLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457 >gi|163794410|ref|ZP_02188381.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium BAL199] gi|159180134|gb|EDP64657.1| acyl-CoA dehydrogenase family protein [alpha proteobacterium BAL199] Length = 601 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 36/304 (11%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 APM + L+E G+ ++ + + + + Y + G K + S + Sbjct: 151 APMLDGRFFGTMALSEPHAGSSLSDVRTSARPLGGERYAIKGSKMWTSGGEHELTRNIVH 210 Query: 244 IMLAQVEGR------VGCFLVPRLL-----EDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 + LA++EG + F+VPR E +PN + L +K+G R L F Sbjct: 211 MTLARIEGAPAGVKGLSLFIVPRYRLDEAGEPAAPNDITLIGLNHKMGYRGTVNTALAFG 270 Query: 293 ---NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G+ N + M ++ + + + +++ G VSL A + RH Sbjct: 271 ENDDCVGWLVGEPNRGLAQMFHMMNEARVGVAMGAIMLAYQGYLVSLDYARTRPQGRHPG 330 Query: 346 GG-------ILIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 LI+ ++R A+A+ L +A A+ + + R E Sbjct: 331 DKDPTTPQLALIEHADVRRMLLQQKAVAEGGLMLALDLAMRIDRQHQDPDETVRRRETLL 390 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + PI K W A + A++ +GG GY + + R YR++ N I G+ + Sbjct: 391 LDFLTPIIKAWFTDRALEANSNAIQVLGGYGYTRDYPVERIYRDNRLNPIHEGANAIQAI 450 Query: 453 DVLN 456 D+L Sbjct: 451 DLLG 454 >gi|212540746|ref|XP_002150528.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210067827|gb|EEA21919.1| acyl-CoA dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 541 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 27/270 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D+A +T + + DG Y ++G K W + +D F + + G G Sbjct: 265 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWADYFTVAVRTGGE-GM 323 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + LL + G+ +R+ + G S+ T + F +T G L+G N + Sbjct: 324 NGISVLLVERENGGVSTRRMDCQ-GVWSSGTTYITFEDTKVPVGNLIGKEN------QGF 376 Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+++ + I S+ RV E++ YA +R G LID PV++ +AD+A I Sbjct: 377 KVIMTNFNHERIGIIIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMKLADMARQI 436 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGY 424 AA L N +A+S + A ++ I K K EA + GG Y Sbjct: 437 EAAYNW---LENVVYQAQSMEDTEAMLKMGGAIAGLKAQSTKTFEFCAREASQIFGGLSY 493 Query: 425 I---EERSIARHYRESPANSILLGSGNAMV 451 + I R YR+ A +I GS M+ Sbjct: 494 SRGGQGGKIERLYRDVRAYAIPGGSEEIML 523 >gi|120613001|ref|YP_972679.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591465|gb|ABM34905.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D +A+ + + D Y + G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVIAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296 R + FLVP G RL++K+G RS+ T ++ F N G Sbjct: 170 TDRAAGKRGMSAFLVPT-----DTPGYVVARLEDKLGQRSSDTAQIMFEGCRIPVENRIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ G +E +I I S M+ S V A+ YA+ R G + + Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDV----AVQYAKERESFGQPIFQHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD A + AA L + A D + +EAA A++ A +MA V + A+ Sbjct: 281 FRLADCATQLEAARQLIWHAATLRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +G G + + + R YR+ I G+ + Sbjct: 334 QTLGWYGVVNDFPVERIYRDVRVCQIYEGTSD 365 >gi|27378410|ref|NP_769939.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27351558|dbj|BAC48564.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 47/305 (15%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 HK PKI S + P ++E G+D+A I + + S+G + L+G Sbjct: 105 HKALIPKILSGDIIPAT-------------AVSEPDHGSDVAGIRTHAVRESNG-WRLNG 150 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W ++D ++ A+ G + LL DG+ G+ + + +G ++ Sbjct: 151 TKAWVTLGGVADRIMVFARTGSEAGHRSISCLLVDGALPGIARGKNEELLGMHGLDDCQI 210 Query: 290 EFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 FS+ F + + N S L A M++ + + +A Sbjct: 211 TFSDVRLPADSVMGPENQAFKMAMSNFNFSR-----------LMMASMALGMAQAAFEDA 259 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 YAR R G +I ++ +AD++ DIAAA L A D + ++EAA A Sbjct: 260 TAYARDRKQFGQAIIGFQAVQFMLADMSTDIAAARLLIHHAARLHDAGEPIAKEAAQA-- 317 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 K + MA ++ A++ GG+GY E I R +R+ I G+ L + Sbjct: 318 -----KLFTTDMAMKHVSNALQIHGGNGYSREYRIERLFRDVRLAQIYEGTNQIQRLIIA 372 Query: 456 NLLEK 460 +EK Sbjct: 373 RQVEK 377 >gi|319648125|ref|ZP_08002342.1| AcdA protein [Bacillus sp. BT1B_CT2] gi|317389760|gb|EFV70570.1| AcdA protein [Bacillus sp. BT1B_CT2] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 28/283 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247 PM + GLTE G+D + + +K D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMARGEKIGAYGLTEPGSGSDAGGMKTTAEKKGD-EYILNGTKIFITNGGIADFYIVFAN 171 Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 Q F+V + G + + K+G RS+ T E+ F + L L Sbjct: 172 LAPEQKHKGTTAFIVEKDF-----PGFSVGKKERKLGIRSSPTTEIIFQDCRVPLKNRLG 226 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 G E KI + LD ++ V +A+ A YA+ R G + +Q + Sbjct: 227 ---GEGEGFKIAMKTLDGGRNGIAAQAVGIAQGAFEAARAYAKERKQFGRPIAEQQGIAF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A +I A+ L+++ A SE Y + A ++K + A V EA++ Sbjct: 284 KLADMATEIEASRLLTYQAAWL------ESEGLPYGKASA-MSKLYAGDTAMKVTTEAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 337 IFGGYGYTKDYPVERFMRDAKITQIYEGTQEIQKLVISRMLMK 379 >gi|315443171|ref|YP_004076050.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315261474|gb|ADT98215.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 57/306 (18%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +T K W P I S E I + +TE G+D+A I + + D Sbjct: 102 LTNDEQKKRWLPGITSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 + ++G K F+SS ++ D +++A+ + G F+V R +E G R +K Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERDME-----GFSRGRKLDK 202 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329 +G S T EL F N LLG ++ P E + I AI +++G R Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAK 384 E + Y++ R G QP+ + +A++ ++ R + + Sbjct: 257 AVFDETLQYSKDRKAFG-----QPIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGE 311 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + EAA A K+W ++A V+ + ++ GG GY+ E +AR Y + +I Sbjct: 312 LTAVEAAKA-------KWWATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFG 364 Query: 445 GSGNAM 450 G+ M Sbjct: 365 GTTEIM 370 >gi|170087346|ref|XP_001874896.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82] gi|164650096|gb|EDR14337.1| isovaleryl-CoA-dehydrogenase [Laccaria bicolor S238N-H82] Length = 420 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 19/259 (7%) Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253 V +G L ++E G+D+ ++ + +K++ G + L+G+K W + P++ ++ A+ Sbjct: 155 VKVGSLAMSETGSGSDVVSMKLKAKKVAGG-WSLTGNKFWITNGPVASTLVVYAKTSPEK 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 G + + + +G +K G R + T EL F + ++ D N+ + Sbjct: 214 GSKGITAFIVENIFDGFSTSPKLDKFGMRGSDTCELVFDSC---VVPDSNILGKVDQGAG 270 Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367 +L+ LD + +SG + L +A +V D+PV M+ IAD+ + Sbjct: 271 VLMSGLDLERIVLSGGPLGLMQAAFDYAVEYVHDRKQFDKPVGTFQLMQAKIADMYTKLN 330 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + + +A + D+ K ++ A A + + + A V E M+C+GG+GYI + Sbjct: 331 ASRSYVYAVAKACDQGKVSRKDCAGAILHS-------TEKAVEVALEGMQCLGGNGYIND 383 Query: 428 RSIARHYRESPANSILLGS 446 + R R+S ++ G+ Sbjct: 384 YPMGRIVRDSRLYTVGAGT 402 >gi|58332612|ref|NP_001011380.1| isovaleryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis] gi|56788857|gb|AAH88561.1| isovaleryl Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis] Length = 419 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 47/299 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G Sbjct: 143 EKYLPKLISGEY--------------IGALAMSEPNSGSDVVSMRLKAEKKGD-YYVLNG 187 Query: 231 HK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 +K W + P +D ++ + + + FLV E G P Q+L +K+G R Sbjct: 188 NKFWITNGPDADVLVVYVKTDPSAQPASHGITAFLV----EKGMPGFSTAQKL-DKLGMR 242 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336 + T EL F + + + NV + + +L+ LD + +SG M+ L AI Sbjct: 243 GSNTCELVFEDC---KIPEQNVLGHLGKGVYVLMSGLDLERLVLSGGPLGIMQAVLDHAI 299 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ +AA + +A + D+ S++ A + Sbjct: 300 PYLHTREAFGQKIGHFQLMQGKMADMYTRLAACRQYVYNVAKACDQGHFNSKDCAGVIL- 358 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + + A V + ++C+GG+GYI + + R R++ I G+G + V +L Sbjct: 359 ------YSAECATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEI--GAGTSEVRRML 409 >gi|169826558|ref|YP_001696716.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] gi|168991046|gb|ACA38586.1| Acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] Length = 378 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 27/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA- 247 PM + GLTE G+D + + ++ D Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGDD-YILNGSKIFITNGGVADTYIVFAV 171 Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + + F+V E G + + K+G RS+ T E+ F N + N+ Sbjct: 172 TDPEAKNGTSAFIVEAGFE-----GFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENL 223 Query: 305 STGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 E KI + LD ++ V +A+ A+ YA+ R G + + Sbjct: 224 LGAEGEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGVSFK 283 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A I A+ L+++ A + +A A++MA T A +V EA++ Sbjct: 284 LADMATQIEASRLLTYQAAWLESNNLPYGKASAMAKLMAGDT-------AMSVTTEAVQV 336 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378 >gi|168179152|ref|ZP_02613816.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916] gi|226950627|ref|YP_002805718.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto] gi|182669955|gb|EDT81931.1| butyryl-CoA dehydrogenase [Clostridium botulinum NCTC 2916] gi|226841457|gb|ACO84123.1| butyryl-CoA dehydrogenase [Clostridium botulinum A2 str. Kyoto] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 26/270 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSIAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + +LE G P G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L D + ++ + +AE AI Y + R G L ++ IAD+ + + A Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A K+ + +AA A++ A T + V ++++ +GG GY ++ Sbjct: 295 AKYLVYKSAWKKSAGKNYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R R++ I G+ + + N L Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377 >gi|121608311|ref|YP_996118.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552951|gb|ABM57100.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 396 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 30/289 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + + P++ S E+ +G L ++E G+D+ ++ + + G Sbjct: 112 SPEQKRKYLPRLISGEH--------------VGALAMSESGAGSDVISMQLRAED-KGGY 156 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L G K W + P +D ++ A+ G + L+E G P C QRL +K+G R Sbjct: 157 YLLDGSKMWITNGPDADILVVYARTGPGTGSQGITAFLIEKGMPGFGCAQRL-DKLGMRG 215 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIH 337 + T EL F G + V G + K+L+ LD ++G M+ L + Sbjct: 216 SPTGELVFD---GVQVPAAQVLGGLDQGAKVLMSGLDYERAVLTGGPLGIMQSVLDHVLP 272 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R G + +++ +AD+ + A A ++ +A + D + + Sbjct: 273 YIHERQQFGQSIGQFQLIQAKVADMYTTLQAGRAFAYTVAKNLDLLGTGHVRQVRKDCAS 332 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 I WC + A + E ++ GG+GYI + + R +R++ I G+ Sbjct: 333 AI--LWCAEKATWMAGEGLQIHGGNGYINDYPLGRLWRDAKLYEIGAGT 379 >gi|70607943|ref|YP_256813.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639] gi|68568591|gb|AAY81520.1| isovaleryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639] Length = 374 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 40/267 (14%) Query: 184 DPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241 DP ++ M IG LTE GG+D+ ++ + ++ +G + +SG K W +D Sbjct: 101 DPISRGKM------IGSFALTEPTGGSDVGSMKTYAER-RNGEWVISGRKMWITQGIYAD 153 Query: 242 AFIMLAQVEGRVG---CFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFG- 296 FI +A+ R G FL+PR C + K ++ GNR T E+ F Sbjct: 154 LFITVARTGSRRGELSVFLLPR--------SNCIESRKIEVMGNRGTGTSEVVFRECKAD 205 Query: 297 --FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349 ++G++N V + L+ +++SG+ + LAE A+ +A R G L Sbjct: 206 ESQVVGEINRGWDMVNTV-----LEVGRLAISGISIGLAESALQEALSWALNREAFGSKL 260 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 +K IAD + + + ++ F+E + + + YA ++ K ++A Sbjct: 261 YSFQGIKWYIADSITKLTSVKSFMKEVSKKFEE--NSNTKGVYASML----KLLSGEVAN 314 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRE 436 V+ +++ GG GY + I R YR+ Sbjct: 315 QVVDLSLQIFGGMGYAKGTKIERIYRD 341 >gi|326575348|gb|EGE25276.1| acyl-CoA dehydrogenase-like protein [Moraxella catarrhalis CO72] Length = 608 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 52/331 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ DG Y ++G K F+S+ D I+LA++ Sbjct: 164 LTESHAGSDLGIIKTRAVPNEDGSYAITGQKIFISAGEHDLTENIIHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + +DGS N + +++K+G +++AT + F + G+L+G N Sbjct: 224 KGISLFIVPKFIVNDDGSVGERNTVSCGSIEHKMGIKASATCVMNFDHAKGYLIGPKNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + L +AI ++ ++ ++ YA+ R + S +I P Sbjct: 284 LNAMFTFVNVARLGTAIQGLAASELAFQGSLTYAKERTAMRALSGVKEPNKSADSIIHHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE---EAAYA----RIMAPITKYWCCK 406 ++ + AL + L+ F + ++ E E +A ++ PI K + + Sbjct: 344 AVRNMLLTQKAFSEGGRALVYYLS-YFADTVAKGENPSEVKFADEILSLLTPIAKAFLTE 402 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 ++ GG GYI E + ++ R++ + + G+ LD+L Sbjct: 403 TGLESANMGVQVYGGHGYISEWGMEQNLRDTRISCLYEGTTEIQALDLLG---------- 452 Query: 467 QLFSTLEQDLGSSGKKVITILRDSISLCKED 497 + LGS G+ + + C+E+ Sbjct: 453 ------RKVLGSQGRMLANFTKIIHQFCQEN 477 >gi|304312807|ref|YP_003812405.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301798540|emb|CBL46770.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 390 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 22/240 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D A + + + + G Y L+G K W ++P++D I+ A++EG++ F Sbjct: 135 FALTEPNHGSDPAGMKTNAKAVPGG-YELTGSKLWITNAPIADVMIVWARLEGKLAGF-- 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 LLE P GL ++ K+ R++ T L F + F L ++ G L Sbjct: 192 --LLEKNMP-GLSAHTIEGKLSLRASITGGLSFDSVFVPEAQRLPLAAGLAAPFAC---L 245 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALS 373 + A ++ + AEA +A R +V G L ++++ +AD+ +IA + Sbjct: 246 NKARFGIAFGSLGAAEACWHAARDYVCLREQFGKPLAANQLIQKKLADMQTEIALGLNAA 305 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R+ D+ SE + + K C + + EA + +G +G +E I RH Sbjct: 306 LRMGRLMDDDACPSE-------LISLMKRNNCGKSLQIAREARDMLGANGISDEYPIMRH 358 >gi|183222229|ref|YP_001840225.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912282|ref|YP_001963837.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776958|gb|ABZ95259.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780651|gb|ABZ98949.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 388 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 41/264 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 L+E G+D+ +T++ +K D +W + + AF + A + G CF Sbjct: 126 LSEPGAGSDVPGMTTRAEKKGDKWIINGAKQWITGASDAQAFTVFAYTDKNRGTRGVSCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302 VPR S GL + ++K+G R+++T ++ F + F + L L Sbjct: 186 YVPR-----SAKGLTVGKKEDKLGIRASSTHQVIFEDCEVGEDALVGKENLGFVYALQTL 240 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 N S V A+M V + +L A YAR R G + ++ +AD+ Sbjct: 241 NASRPFV-----------AVMGVGVAQAALDHAARYAREREQFGVKIGTFQAVQHMLADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ + A ++++ A D + + I K + + A +A++ GG Sbjct: 290 SIKVETAREITYKAARLSDANDPNLPK------YSAIAKAYASECAVQCATDAVQIFGGY 343 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY +E + + R+S +I G+ Sbjct: 344 GYTKEYPVEKLMRDSKILTIFEGT 367 >gi|291009013|ref|ZP_06566986.1| acyl-CoA dehydrogenase domain-containing protein [Saccharopolyspora erythraea NRRL 2338] Length = 360 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 25/258 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG-- 254 G L+E G+D AA++++ + D W ++D + ++A+ +G G Sbjct: 103 GYALSESHAGSDAAALSTRAVRAGDAYEVTGTKSWITHGGVADFYTLMARTSDDGPRGIS 162 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 C LV DG+ GL ++K+G + T EL F G + + + +KI Sbjct: 163 CLLV-----DGTTPGLSAGTPEHKMGLTGSPTTELRFD---GARVPAERLVGAEGDGLKI 214 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LDS + ++ V LA+ A+ YA++R G +I+ ++ +AD+A + + Sbjct: 215 ALAALDSGRLGIAACAVGLAQAALDLAVDYAKQREQFGRPIIEFQGLEFLLADMAAVVHS 274 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A D A+ R + + A + K A V +A++ +GG GY + Sbjct: 275 AR------ATYLDGARRRDAGMPFG-MQASVAKLVATDAAMKVTTDAVQVLGGVGYTRDF 327 Query: 429 SIARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 328 PAERYMREAKVLQIFEGT 345 >gi|259419424|ref|ZP_05743340.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B] gi|259344665|gb|EEW56552.1| acyl-CoA dehydrogenase [Silicibacter sp. TrichCH4B] Length = 391 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 38/261 (14%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 + + LTE G+D A++ ++ K D Y L+G K F+++ + AF ++A+ G G Sbjct: 118 ITVSFALTEPEVGSDAASLKTRAVKDGD-FYVLNGTKRFITNANRAGAFTLMART-GEAG 175 Query: 255 C-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302 F+VP L +GL + K+G R T V + N G + G Sbjct: 176 ARGISAFVVPAGL-----DGLTIGKHDKKMGQRGTRTADVILEDVRVPAENIIGGIPG-- 228 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 G MK+L D + ++ +A+ A+ YA R G + +++ Sbjct: 229 ---KGFYTAMKVL---DRGRLHIATQACGMADRLIRDAMAYALDRKQFGQPIASFQLIQG 282 Query: 358 AIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 AD ++ AA ++ + A +D A SR++E + A A TK +C +M V A Sbjct: 283 MFADSQAELYAAKSMLQKAATLYDTVPAGSRNDELSMA---AACTKMFCTEMVGRVADRA 339 Query: 416 MECIGGSGYIEERSIARHYRE 436 ++ GG+GYI E + R YR+ Sbjct: 340 VQIHGGAGYISEYKVERFYRD 360 >gi|328543424|ref|YP_004303533.1| acyl-CoA dehydrogenase, C-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326413169|gb|ADZ70232.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 390 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D I+ A+ + + G + Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKMWITNGPCADTLIVYAKTDPQAGPKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLIEKGFAGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGSVGKGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A +V M+ ++ AI Y R G + +++ IAD+ + + A+ A Sbjct: 250 ERAVL----AAGAVGIMQAAMDVAIPYVHERQQFGQPIGTFQLVQGKIADMYVAMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A + A + +A++ +GG+GYI + Sbjct: 306 YVYAVAQACDRGETTREDAAGAILYA-------AENATKIALDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|317123539|ref|YP_004097651.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315587627|gb|ADU46924.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 383 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 40/283 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGR----V 253 GLTE G+D + ++ ++ DG Y ++G K F+++ +D ++ A+ G V Sbjct: 123 FGLTEPDNGSDPGNLKTRARR--DGSDYVINGQKIFITNGTWADVCLVFARTGGDGPKGV 180 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GP 308 FLVP SP G + + K+G R AT E+ L D+ V Sbjct: 181 SAFLVP----TDSP-GFEAREIHGKLGLRGQATAEI--------FLTDVRVPESARLGAE 227 Query: 309 VEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI ++ LD +SV ++ L E + Y R G + +++ IA+I Sbjct: 228 GEGFKIAMHSLDKGRVSVGAGCTGIIQGCLEEVVKYTTERKQFGRPIASFQLIQEIIAEI 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++D+ AA L++R A+ + + EA+ A KY+ + A A++ GG Sbjct: 288 SVDVDAARLLTWRAADLIERGEPFGVEASKA-------KYFASEAAVRAANGALQAFGGY 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 GY++E I ++ R++ ++ G+ L ++ E G + F Sbjct: 341 GYVDEYPIQKYMRDARVMTLYEGTSQIQKL-LIGRAETGISAF 382 >gi|11498891|ref|NP_070122.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304] gi|2649289|gb|AAB89955.1| acyl-CoA dehydrogenase (acd-9) [Archaeoglobus fulgidus DSM 4304] Length = 384 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 39/310 (12%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S+ +A +A++ P V + + + +Y P P+ + + +TE GTD+AA+ Sbjct: 84 SIGTAVDLAILGVPMVLR-YGSEEQKEKYIP----PVVQGKAPSAIAITEPDCGTDVAAM 138 Query: 215 TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA---QVEG---RVGCFLVPRLLEDGSP 267 ++ K + + ++G K F+++ ++ I+LA +VE + F+V E Sbjct: 139 RTKAVKEGEE-WVINGSKTFITNGSVAGHTIVLAKTAEVEPPHRGISAFIVEPAWE---- 193 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 G +R++ K+G + T E+ N LLG+ N +++ + + + + Sbjct: 194 -GYEARRIE-KMGLNCHDTAEITLKNVRVPAENLLGEENRGF-----YQLMEFFNESRVK 246 Query: 325 VSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 ++ + + +A A+ YA++R G LI+ ++ +AD+ DI AA L ++ A Sbjct: 247 IAALHLGMAVGAYERALEYAKQRKAFGKALIEHQAIQFKLADMWKDIEAARLLVYKAAWL 306 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D+ K ++ A++ A + A V EA++ GG GY +E I R+YR++ Sbjct: 307 IDQGKPVPAISSAAKLFA-------SEAAVKVTYEALQVFGGYGYSKEYDIERYYRDARV 359 Query: 440 NSILLGSGNA 449 +I G+ A Sbjct: 360 GTIYEGTSEA 369 >gi|330821061|ref|YP_004349923.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia gladioli BSR3] gi|327373056|gb|AEA64411.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia gladioli BSR3] Length = 615 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 54/332 (16%) Query: 175 APKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 A K+ P KA P++ + TE R GTD+ A+ + + + +Y L G Sbjct: 130 AIKLLQSSGTPAQKALIEPLRASRWDACFCATEPRAGTDLTAVGLRAEPLDQDVYTLRGE 189 Query: 232 KWFLSSPMSD-----AFIMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRL 275 K F+S+ M + + +L +VE + CF+VPR D + PN + L Sbjct: 190 KVFISAGMHELTENTLYFVLGRVESSAPDSFSLSCFVVPRFWPDEASGELRPNHVECIGL 249 Query: 276 KNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 K+G + A L F T G+LLG + V ++++ ++ A MS V + Sbjct: 250 PRKMGLKGCANTHLVFGRGGATRGWLLG----ARRNVGLLQLIPLMNQARMSTGMFGVGV 305 Query: 333 AE-----AIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFR 375 A A+ YARRR I +I+ ++R + D+ + L + Sbjct: 306 ASNAYLHAVDYARRRRQGRPIEQASNTSAERVAIIEHADVQRMLIDMKSRLDGCRGLLGK 365 Query: 376 LANSFD-----EAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 LA + EA ++ A R ++ PI K + A + A++ GG GY Sbjct: 366 LAATATQALVLEAAPDADPALIERRRKLQQMLTPICKAFISDQAWRICESAIQVHGGLGY 425 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + + R+ SI G+ D++ Sbjct: 426 TDASPVEQCARDVKVLSIWEGTNYIQAQDLVR 457 >gi|326484913|gb|EGE08923.1| glutaryl-CoA dehydrogenase [Trichophyton equinum CBS 127.97] Length = 383 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 22/202 (10%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ ++ G Y LSG K W +SP+SDAF++ A+++G++ F Sbjct: 166 FGLTEPNHGSDPGSMETVARPHPTKKGFYALSGTKTWITNSPISDAFLVWAKLDGKIRGF 225 Query: 257 LVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 ++ R D P G L +KNK R++ T ++ N + ++ GP Sbjct: 226 VLER---DQCPEGTLRTPAIKNKTALRASITGMIQMDNCPVPETNMFPEVTGLVGP---- 278 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDI 366 L+SA + ++ G +L + I AR R+ G L ++++ +AD A D Sbjct: 279 --FTCLNSARLGIAFGTMGALEDCISRAREYALERKQFKGNPLAKYQLVQKKLADAATDA 336 Query: 367 AAATALSFRLANSFDEAKSRSE 388 A T + ++A DE K+ E Sbjct: 337 AYGTLAAVQVARLKDEGKAVPE 358 >gi|228942489|ref|ZP_04105025.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975421|ref|ZP_04135976.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982056|ref|ZP_04142348.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228777594|gb|EEM25869.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407] gi|228784215|gb|EEM32239.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817172|gb|EEM63261.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 381 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 E + R +R++ I G+ Sbjct: 350 EYPVERFFRDAKITQIYEGT 369 >gi|226287036|gb|EEH42549.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18] Length = 434 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/346 (21%), Positives = 145/346 (41%), Gaps = 53/346 (15%) Query: 116 HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWA 175 HC W +S E H++R+ L A S + ++L P + Sbjct: 110 HCVFWRKSAE-------HQVRSIGLSYAAH---------SQLCVNQLSLNGNPEQKAKFL 153 Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233 P + S E +G L ++E G+D+ ++ + + + DG Y L+G K W Sbjct: 154 PSLISGE--------------KVGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMW 198 Query: 234 FLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + P +D ++ A+ + G + + + + G R +K+G R + T EL F + Sbjct: 199 ITNGPDADYIVVYAKTKPDAGSKGITAFVVEKTFKGFSCSRKLDKLGMRGSNTGELIFDD 258 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHV 344 F +LG++N +K+L+ L+ ++S M+ +L + Y R Sbjct: 259 VFVPQENVLGEVN------RGVKVLMEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQ 312 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA----KSRSEEAAYARIMAPIT 400 + +++ +AD+ ++A+ A ++ A D+A +RS A + A Sbjct: 313 FDAPIAHNQLIQGKLADMYTKLSASRAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAI 372 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 Y + A +A++ +GG+GY+ E R R++ I G+ Sbjct: 373 LY-AAERATECALDAIQLMGGNGYVNEIPAGRLLRDAKLYEIGAGT 417 >gi|242800822|ref|XP_002483661.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218717006|gb|EED16427.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 547 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 27/270 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D+A +T + + DG Y ++G K W + SD F + + G G Sbjct: 271 ICLAITEPDAGSDVANLTCEAKLSEDGKHYIVNGEKKWITNGIWSDYFTVAVRTGGE-GM 329 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + LL + G+ +R+ + G S+ T + F +T L+G N + Sbjct: 330 NGISVLLVERENGGVSTRRMDCQ-GVWSSGTTYITFEDTKVPVENLIGKEN------QGF 382 Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+++ + I S+ RV E++ YA +R G LID PV++ +AD+A I Sbjct: 383 KVIMTNFNHERIGIVIQSLRFSRVCYEESVKYANKRRTFGKKLIDHPVIRMKLADMARQI 442 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGY 424 AA L N +A+S E A ++ I K K EA + GG Y Sbjct: 443 EAAYNW---LENVVYQAQSMEETEAMLKMGGAIAGLKAQSTKTFEFCAREASQIFGGLSY 499 Query: 425 I---EERSIARHYRESPANSILLGSGNAMV 451 + I R YR+ A +I GS M+ Sbjct: 500 SRGGQGGKIERLYRDVRAYAIPGGSEEIML 529 >gi|87199662|ref|YP_496919.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM 12444] gi|87135343|gb|ABD26085.1| isovaleryl-CoA dehydrogenase [Novosphingobium aromaticivorans DSM 12444] Length = 387 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ G + L+G K W + +D ++ A+ G + Sbjct: 129 LAMSEAGAGSDVVSMKLRADAVAGG-FRLNGTKFWITNGTYADTLVVYAKTSPEAGSRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F + F G L G + V ++ Sbjct: 188 SAFLIEKDMPGFSIGQKIDKMGLRGSPTCELVFDDCFVPEENVMGPLHGGVGVLMSGLDY 247 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ A M + M+ L I Y R R G + +M+ +AD+ + I +A A Sbjct: 248 ERVVL----AGMQIGIMQACLDTVIPYVRERKQFGQPIGTFQLMQAKVADMYVAIQSARA 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ +AA A ++A + V EA++ +GG+GY ++ + Sbjct: 304 YVYAVAKACDAGQTTRFDAAGAILLASENAF-------RVSGEAVQALGGAGYTKDWPVE 356 Query: 432 RHYRESPANSILLGS 446 R+ R++ I G+ Sbjct: 357 RYLRDAKLLDIGAGT 371 >gi|30265366|ref|NP_847743.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47530908|ref|YP_022257.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188177|ref|YP_031430.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|165871314|ref|ZP_02215963.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167635755|ref|ZP_02394065.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|167640445|ref|ZP_02398709.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|170688210|ref|ZP_02879421.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|170708025|ref|ZP_02898473.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|177651849|ref|ZP_02934432.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190569118|ref|ZP_03022017.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|227818105|ref|YP_002818114.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|229601004|ref|YP_002869557.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] gi|254687216|ref|ZP_05151074.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066] gi|254724697|ref|ZP_05186480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055] gi|254735271|ref|ZP_05192980.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North America USA6153] gi|254755812|ref|ZP_05207844.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum] gi|254762152|ref|ZP_05213998.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94] gi|30260044|gb|AAP29229.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47506056|gb|AAT34732.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182104|gb|AAT57480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|164712981|gb|EDR18509.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167511665|gb|EDR87047.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|167528864|gb|EDR91621.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|170126998|gb|EDS95877.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|170667903|gb|EDT18655.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|172082553|gb|EDT67617.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190559786|gb|EDV13772.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|227006065|gb|ACP15808.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|229265412|gb|ACQ47049.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + +Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|84503054|ref|ZP_01001150.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84388598|gb|EAQ01470.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ ++ ++G Y L+G K F+S SDA++++A+ EG G + Sbjct: 124 LTEPGSGSDAAALRTRAERTNEG-YRLNGTKAFISGGGYSDAYVVMARTGAEGPRGVSTL 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 +EDG+ GL + L+ K+G +S T +++F N D++ + E+ K Y Sbjct: 183 --YVEDGA-EGLSFGGLEQKMGWKSQPTRQVQFDNC------DVSAANLIGEEGKGFTYA 233 Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD +++S + A+ + Y R G + ++ +AD+ +++ AA Sbjct: 234 MVGLDGGRLNISACSLGAAQTALDMTLAYMAERKAFGQPINQFQALQFRLADMEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D+ A A + K + + V+ + ++ GG GY+ + Sbjct: 294 RTFLRQAAWKLDQG------APDATKFCAMAKKFVTETGSKVVNQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372 >gi|94968160|ref|YP_590208.1| butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis Ellin345] gi|94550210|gb|ABF40134.1| Butyryl-CoA dehydrogenase [Candidatus Koribacter versatilis Ellin345] Length = 392 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 34/275 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+T++ + D Y ++G K W ++ + F++LA V+ G + Sbjct: 136 LSEAGSGSDAFALTTRAEDKGDH-YVINGRKLWITNAKEAGLFVLLATVDPSAGYKGITA 194 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 L + S G + ++K+G R+++T EL +L D V P E++ Sbjct: 195 FLVEKSFEGFTVGKKEDKLGIRASSTCEL--------ILEDCKV---PKENVLGEVGKGY 243 Query: 313 KILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI I L+ + + + LA A YA R G L ++ IA +A +I Sbjct: 244 KIAIETLNEGRIGIGAQMLGLARGAWEHAAKYATERKQFGQALSSFQGIQFQIAQMATEI 303 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + + A D + +EAA +TK + ++A V + ++E GG G+ + Sbjct: 304 EAVRMMVYNAARMKDAGMNFVKEAA-------MTKLFASQVAERVASLSLEVYGGYGFTK 356 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + +++R+S I G+ N ++ + ++ G Sbjct: 357 DYPAEKYFRDSKIGKIYEGTSNMQLMTIAKMVMGG 391 >gi|326386146|ref|ZP_08207770.1| acyl-CoA dehydrogenase-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209371|gb|EGD60164.1| acyl-CoA dehydrogenase-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 573 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 61/352 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSD-----AFIMLAQVE 250 + LTE + G+D+ A+ S I++G Y + G K F++ D ++LA+ Sbjct: 161 MNLTEPQAGSDVGALRSTAAPITEGEHAGKYRVKGTKIFITWGEHDLAENIVHLVLARTP 220 Query: 251 GR------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296 G + F+VP+ +L DGS N + +++K+G S+ T + F + G Sbjct: 221 GAPAGTRGISLFIVPKYHVLADGSLGARNDVRCVSIEHKLGIHSSPTCVMSFGDHDECIG 280 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR----HVSGG 347 ++G G ++ M ++SA ++V V ++EA + YAR R S G Sbjct: 281 EMVG---AEFGGLKAM--FTMMNSARVNVGNQGVQISEAALQKALSYARDRIQSPRASSG 335 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-ARIMAPITK 401 +I+ P ++R I + A L + A D +A A ++ P+ K Sbjct: 336 DKTPVAIIEHPDVRRTIMRMRALTEGARGLLYYTAGQIDRGTLGDTDAQKRAEVLVPLLK 395 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 W V ++ GG G+IEE A+ YR++ I G+ D + Sbjct: 396 AWGTDTGCEVATLGVQVHGGMGFIEETGAAQFYRDARIAPIYEGTNGIQAADFVT----- 450 Query: 462 TNLFEQLFSTLEQDLG-SSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 + LG +G V +L D ++ C E LA + +A+A+ Sbjct: 451 ------------RKLGYDNGDVVKALLEDIVADCAESPELASLARDALAIAA 490 >gi|323358382|ref|YP_004224778.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] gi|323274753|dbj|BAJ74898.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] Length = 389 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 18/258 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AAIT+ + D Y L+G K F+S + ++ G G + Sbjct: 134 LTEPGAGSDAAAITTSAIRHGD-TYVLTGVKQFISGAGEASVYVVMARTGEPGARGISAF 192 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L GL + L+ K+G + T V + N G +++ + + Sbjct: 193 LVPADAEGLSFGPLEKKMGWNAQPTRQVILDEVRVPAENLLGGEGRGFSIAMTALNGGR- 251 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ A S+ G R +L AI Y R G L ++ + A+AD+A ++ AA L Sbjct: 252 ---LNIATCSIGGARWALDRAIAYVHERFTFGEALAEKQSVVFAVADMATELEAARLLVR 308 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + D ++ + A MA K + + V EA++ GG GY+++ I + Sbjct: 309 EAATALD---AKDPDTATRCAMA---KRFATDVGFRVANEALQLHGGYGYLQDYGIEKVV 362 Query: 435 RESPANSILLGSGNAMVL 452 R+ + IL G+ M L Sbjct: 363 RDLRVHQILEGTNEIMRL 380 >gi|15806274|ref|NP_294979.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6459002|gb|AAF10828.1|AE001973_1 acyl-CoA dehydrogenase [Deinococcus radiodurans R1] Length = 387 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 37/261 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + ++ D + L+G K W S +D F+++A+ G V CF Sbjct: 130 LTEAHAGSDAASLRLKAERDGDD-WVLNGAKAWITSGNHADTFLVMARTGGPGARGVSCF 188 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +V R G+P GL + ++K+G + T + F N L+G+ E Sbjct: 189 IVER----GTP-GLSSGKPEHKMGQHAAQTTTVSFDNVRVPHANLVGE--------EGQG 235 Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++I L S ++ + R +L A YA R G + + + IA +A Sbjct: 236 LIIALSSLDSGRIGIGMLGLGIARSALEHAAAYANEREQFGKKIREFEGVSFKIARMAAR 295 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I +A + + A D+ + S+EA+ A+++ + A V +A++ GG+GY Sbjct: 296 IESARLVGLKAAWLKDQGQPFSKEASIAKLLG-------SEAAVDVTRDAVQIFGGNGYS 348 Query: 426 EERSIARHYRESPANSILLGS 446 E + + YR++ I G+ Sbjct: 349 AEYPVEKLYRDAKITEIYEGT 369 >gi|331700302|ref|YP_004336541.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954991|gb|AEA28688.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 619 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 66/405 (16%) Query: 99 FHPAWHAL-LRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157 F PA H++ L +S+ D +WD + RL L A+L G+ + PSV Sbjct: 80 FDPATHSVTLPQSLKDAYKV-LWDGEW-------------WRLSLPAEL-GGYGIPPSVQ 124 Query: 158 -SASMVALMTTPRVHKDWA-PKIFSREYDPTNKAPMQKTSVAIGLG------LTEKRGGT 209 +A+ + L + P A P S + + IG G LTE G+ Sbjct: 125 WAAAELILGSNPVAFMYMAGPNFASILHRNGTDEQKHWAELMIGRGWGATMVLTEPDAGS 184 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLV 258 D+ A ++ + +DG + + G K F++S D ++LA+ EG + FLV Sbjct: 185 DVGAGRTKAIQQADGTWHIEGVKRFITSAEQDMTENIMHLVLARPEGAKAGTKGLSLFLV 244 Query: 259 PRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGP 308 P+ E G NG +++K+G + + T EL F G+LLGD V G Sbjct: 245 PKFHFDSQTGEPGERNGAFVTGVEHKMGLKGSTTCELTFGQHGVPAVGWLLGD--VHDGI 302 Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------------QP 353 + +++ Y + ++ + A+ YA+ R V G L P Sbjct: 303 AQMFQVIEYARMMVGTKAIGTLSAGYLAALEYAKER-VQGADLTQMLDKTAPRVTITHHP 361 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---MAPITKYWCCKMAPA 410 ++R + AL A D ++ + A ++ + P+ K + A Sbjct: 362 DVRRILMLQKAYAEGLRALYTYTATYQDRIRAGGDTALAEKVNDLLLPVVKGVGSERASE 421 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ +++ +GGSGY+++ I ++ R++ +S+ G+ LD++ Sbjct: 422 MLLLSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGTTAIQSLDLV 466 >gi|326943140|gb|AEA19036.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar chinensis CT-43] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 E + R +R++ I G+ Sbjct: 345 EYPVERFFRDAKITQIYEGT 364 >gi|302870352|ref|YP_003838989.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302573211|gb|ADL49413.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 35/278 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A I + + D Y ++G K +++S + F+ A G V Sbjct: 124 LAITEPDGGSDVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVCTEFPGSGSVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 L+ D G R K+G + T EL F + + + GP ED L Sbjct: 183 LLVIDKGTPGFTVGRRLEKLGWHCSDTAELSFVD----VRVPVTNRVGP-EDTGFL---- 233 Query: 320 SAIMS-VSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 AIM + R+SLA A+ + R R G L+ + V++ +A++ Sbjct: 234 -AIMQQFANERLSLATQAYATAQRCVDLAVQWCRDRQTFGRPLVGRQVVRHKLAEMHSRT 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA A +A + E A A+ +A T W V+ A++ GG GY+ Sbjct: 293 DAARAYVHDVAERVAAGQPVVTEVAMAKNVAVATCDW-------VVDAALQLHGGFGYMR 345 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + + RHYR++ LLG G + ++ KG L Sbjct: 346 DAEVERHYRDAR----LLGIGGGTTEIMNEIIAKGMGL 379 >gi|221103162|ref|XP_002163311.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase, short/branched chain [Hydra magnipapillata] Length = 418 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 43/292 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P TS+ L+E G+D A+ + +++ D Y ++ +K W ++ + F++ A Sbjct: 145 PKLATSMVGCFNLSEAGSGSDAFAMKATAKQVGDD-YIINANKLWISNAEHAGLFLVFAN 203 Query: 249 VE------------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 + + CFLVP+ GL + ++K+G R+++T +++++ Sbjct: 204 AKPDLLNTNPSKAYKGITCFLVPK-----DTKGLVVGKKEDKLGIRASSTCPVDYTDVRV 258 Query: 295 -FGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 +LG+L + +E + I + + + LA+ A+ Y + R Sbjct: 259 PKSSILGELGLGYKYAIECLNI------GRIGIGAQMIGLAQGAMDIAVPYTKERQQFNK 312 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCK 406 + D ++ I+D+A + AA L + A R +EA +M A + KY+ + Sbjct: 313 KIFDFQGLQHQISDVATKLEAARLLVYNAA--------RLKEANKDFVMQAAMAKYYSSE 364 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 +A ++ +E +GG G+ +E I + YR+ I G+ N + + LL Sbjct: 365 VATLATSKCIEWMGGVGFSKEYPIEKFYRDCKIGCIYEGTSNIQLNTIAKLL 416 >gi|120405539|ref|YP_955368.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958357|gb|ABM15362.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 47/301 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +T K W P I S E I + +TE G+D+A I + + D Sbjct: 102 LTNDEQKKRWLPGIASGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 + ++G K F+SS ++ D +++A+ + G F+V R +E G R +K Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERGME-----GFTRGRKLDK 202 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329 +G S T EL F N LLG ++ P E + I AI +++G R Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 E + YA+ R G + + +A++ ++ R + + + E Sbjct: 257 AVFQETLQYAKDRKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVDGELTAVE 316 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A K+W + A V+ + ++ GG GY+ E +AR Y + +I G+ Sbjct: 317 AAKA-------KWWATETAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEI 369 Query: 450 M 450 M Sbjct: 370 M 370 >gi|67537036|ref|XP_662292.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4] gi|40741540|gb|EAA60730.1| hypothetical protein AN4688.2 [Aspergillus nidulans FGSC A4] gi|259482476|tpe|CBF76996.1| TPA: Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10) [Source:UniProtKB/TrEMBL;Acc:Q6T5L6] [Aspergillus nidulans FGSC A4] Length = 431 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 27/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + +++ DG + L+G K W + Sbjct: 143 NGTPEQKARFLPGLLSGEKIGALAMSEHSAGSDVVSMKTSAKEV-DGGWVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 LLG++N +K+L+ L+ ++S M+ +L + Y R G Sbjct: 262 PRENLLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGA 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D S A + A Y + Sbjct: 316 PIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASLGSAAIRTQDCAGAILY-AAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|262067060|ref|ZP_06026672.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693] gi|291379227|gb|EFE86745.1| butyryl-CoA dehydrogenase [Fusobacterium periodonticum ATCC 33693] Length = 381 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 39/292 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+++ + +I+ A + G + ++E G+P G + + K+G R +AT EL Sbjct: 156 KIFITNAGYAHVYIVFAMTDKSKGLKGISAFIVESGTP-GFSIGKKEMKLGIRGSATCEL 214 Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334 F N LLGD + KI A+M++ G R+ +A E Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDE 262 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI+YA+ R G L + IA++ + + AA L ++ A S +AA A+ Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A T A V +A++ GG GY E + R R++ I G+ Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|254481275|ref|ZP_05094520.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214038438|gb|EEB79100.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 378 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 123/285 (43%), Gaps = 19/285 (6%) Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 AP I F E P T A+G L +TE G+D+ I + + D + L+G Sbjct: 93 APYIEHFGTEEQKQQWLPKMVTGEAVGALAMTEPGAGSDVQGIRTSAVQDGDE-WVLNGS 151 Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ + +D I+ A + G L D S G + KIG ++ T EL Sbjct: 152 KIFITNGIHADLVIVAAITDPGKGAKGTSLFLVDASLPGFDKGKKIEKIGQHASDTAELF 211 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345 F + LLGDLN G V MK L L A +V+ +L + Y + R Sbjct: 212 FQDVRLPANALLGDLN--KGFVIMMKELPRERLGIAAQAVAAAEGALQITVDYVQERKAF 269 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G + + +AD+ +IA A + AN + ++ +++AA + KY Sbjct: 270 GQTVGSFQNTRFTLADVKTEIALNRAFYDQCANQYASSELSADDAA-------MLKYAAT 322 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 +M + + ++ GG GY E I+R+Y ++ I G+ M Sbjct: 323 EMQCKTVDQCLQLFGGYGYTAEYPISRYYTDARIQRIYGGTSEIM 367 >gi|126650984|ref|ZP_01723195.1| CoA dehydrogenase [Bacillus sp. B14905] gi|126592185|gb|EAZ86234.1| CoA dehydrogenase [Bacillus sp. B14905] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 23/257 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ K GLTE G+D A T I Y ++G K ++++ I++ V Sbjct: 113 PLAKGETLGSFGLTEPNAGSD-AGGTRTTAVIDGDDYVINGEKCWITNAGYARQIIVTAV 171 Query: 250 EGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G+ G ++ ++ + G+ +K+G R + T E+ N LLGD Sbjct: 172 TGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLQNVRVPRTNLLGDEKR 231 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + L LD +S++ + V +A+A + +A+ R G + ++ + Sbjct: 232 GFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFKL 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A++I A L + A D+ K +EAA A++ A + C +A++ Sbjct: 287 ADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQIH 339 Query: 420 GGSGYIEERSIARHYRE 436 GGSGY++E + RH R+ Sbjct: 340 GGSGYMKEYDVERHLRD 356 >gi|56477494|ref|YP_159083.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum aromaticum EbN1] gi|56313537|emb|CAI08182.1| putative acyl CoA dehydrogenase oxidoreductase protein [Aromatoleum aromaticum EbN1] Length = 377 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----C 255 LTE G+D +A+ + + D + ++G K F+++ +D I+ A + G C Sbjct: 123 LTEPHVGSDASALKTTAVRDGDS-WVINGVKQFITTGREADVAIVFAVTDKTAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 FLVP + G R++ K+G +++ T ++ F + LLG ++ Sbjct: 182 FLVPT-----NTPGYIVARIEEKMGQKASDTAQILFEDCRVPADALLGAEGEGYRIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A + R +L A+ YA R G + + + +AD+A + A Sbjct: 237 LEAGRIGI----AAQCLGMARAALEAAVKYAHERETFGKPIFEHQAVNFRLADMATQLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A+ D + +EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 293 ARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAEKVCSDAIQVHGGYGYVTDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRVCQIYEGASD 365 >gi|239813462|ref|YP_002942372.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239800039|gb|ACS17106.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 385 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 34/268 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC--- 255 + ++E G+D+ A+ + + +DG Y L+G K F+++ +D I++A+ + G Sbjct: 124 IAMSEPGAGSDLQAVKTSAIRQADGSYLLNGSKTFITNGWHADLVIVVAKTDPAAGAKGT 183 Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-LNVSTGPV 309 FLV R G P +RLK K+G ++ T EL F++ LLGD ++ G V Sbjct: 184 SLFLVER----GMPGFEKGKRLK-KLGLKAQDTSELFFTDVRLPADALLGDAAQLNRGFV 238 Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M+ L + L AI +V+ + ++ + + Y + R V G + + +A++ ++ Sbjct: 239 CLMEQLPWERLQIAISAVAASQAAIDQTVTYVKERKVFGQPVGSYQNTRYTLAELQTEVQ 298 Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + +A D A A + KYW + V+ ++ GG Sbjct: 299 VAQVFVDKCIELLMAEKLDTA------------TASMAKYWTTDLQCKVMDACVQLHGGY 346 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G++ E I R Y ++ I G+ M Sbjct: 347 GFMWEYPITRAYADARVQRIYGGTNEIM 374 >gi|126642194|ref|YP_001085178.1| putative acyl CoA dehydrogenase oxidoreductase protein [Acinetobacter baumannii ATCC 17978] Length = 330 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 75 LTEPHVGSDASAILCKAERDGDH-WILNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 133 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 134 FLVPT-----NTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 188 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 189 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 244 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 245 AHQLVLHAATLKDAGLPCLKEASMAKLFAS-------TMAERVCSDAIQIHGGYGYVSDF 297 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 298 PVERIYRDVRVSQIYEGASD 317 >gi|114763488|ref|ZP_01442893.1| Acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114543768|gb|EAU46780.1| Acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601] Length = 523 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLAQVEGRVGC--- 255 LTE G+D++AI ++ + + + + G K F+S M+D + L V R G Sbjct: 158 LTEPGAGSDLSAIRTKATRDGES-WRIEGEKIFISGGDQDMTDNILHL--VLARTGAPED 214 Query: 256 -------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 F P + EDG N + R++ K+G ++ T +L F G L+G Sbjct: 215 GIRGLSLFACPAIREDGVRNAVTVTRIEEKLGLHASPTCQLAFDGAQGELVGAEGAGLKA 274 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----LIDQ-PVMKRAIADI 362 + M LD + V+ + A+HYA R G IDQ P + R I Sbjct: 275 MFAMMNHARLDVGLQGVAHAARAADLALHYAAERKQGRGADGTVASIDQHPDVARMI--- 331 Query: 363 ALDIAAATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 D A AL R L + A+ E + M P+ KY+C + A++ +GG Sbjct: 332 --DECDALALGGRALCHITLVAQELGTEPDFVEFMTPVCKYFCTEAGSRAADLAIQVMGG 389 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY+ E +++R++ +I G+ Sbjct: 390 YGYLREYGAEQNWRDNRICAIYEGT 414 >gi|86158072|ref|YP_464857.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774583|gb|ABC81420.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259 LTE G+D +A+ + + DG + LSG K F++ + +F++LA+ + GR + Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDG-WVLSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316 +LE G G + + K+G RS+ T +L E LGD V G ++ ++IL Sbjct: 184 FILEPGM-KGFSQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGD--VDRGFIDTLQILD 240 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++V R +L E+ YAR R G + + + +AD+A ++ AA L Sbjct: 241 RGRITIGALAVGLGRGALEESRAYARERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D + A+ A K + + A + A++ GG GY + + RH+ Sbjct: 301 RAAAMCDAGQPFGAAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353 Query: 435 RESPANSILLGSGNAMV 451 R++ I G G + V Sbjct: 354 RDAKLTEI--GEGTSEV 368 >gi|319950404|ref|ZP_08024320.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] gi|319435920|gb|EFV91124.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] Length = 387 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 50/381 (13%) Query: 88 GPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLE 147 GP + WD+ P +LR + G+ +I+ E V ++ R++ QL Sbjct: 24 GPMAQEWDETHHFP--KDVLREAAGMGMG-AIY--VSEDVGGSGMRRLDGVRIF--EQLA 76 Query: 148 AGHLMSPSVTS--------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 G PSV + MV T ++W P++ S E + Sbjct: 77 RG---CPSVAAYLSIHNMCVWMVDEFGTDEQRQEWIPRLASMELFAS------------- 120 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D AA+ ++ + D Y L+G K F+S SD ++++A+ G G + Sbjct: 121 YCLTEPGAGSDAAALRTKAVRDGD-HYVLTGTKQFISGGGQSDVYLVMART-GDAGPKGI 178 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L GL + + K+G + T ++ L+G + S G I Sbjct: 179 SAFLVPADSEGLSFGADERKMGWNAQPTAQVIMEGVRVPAANLIGGAD-SGGEGLGFTIA 237 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ A S+ G + + A A+ + R R GG LID+P ++ +A++A ++ A+ Sbjct: 238 MRGLNGGRINIAACSLGGAQEAYARAVAHVRDREAFGGALIDEPTIRFTLAELATELEAS 297 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + +R A + D + E + + K + + +++ GG GY+ E Sbjct: 298 RLMLWRAAAALDAKEPDHVE------LCAMAKLFVTDRCFDIADRSLQLFGGYGYLSEYG 351 Query: 430 IARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 352 IEKIVRDLRVHRILEGTNEIM 372 >gi|254229382|ref|ZP_04922798.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25] gi|151938073|gb|EDN56915.1| acyl-CoA dehydrogenase, C-terminal domain protein [Vibrio sp. Ex25] Length = 389 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 37/308 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP K + PK+ + T V L ++E G+D+ ++ + + D + Sbjct: 110 TPSQRKKYLPKL------------IDGTHVG-ALAMSEPNAGSDVISMQLKAENKGDH-F 155 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 L+G+K W + P +D ++ A+ + G + + + + G + + +K+G R + Sbjct: 156 VLNGNKMWITNGPDADIVVLYAKTDVNAGSRGITAFIVERNVEGFSHAQKLDKLGMRGSN 215 Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYA 339 T EL F+N +LG+LN VE + + + +++ M+ + + Y Sbjct: 216 TCELVFNNCVVPKENILGELNQG---VEVLMSGLDYERVVLAAGPLGIMQACMDIVVPYV 272 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + + +++ IAD+ ++AA A + +A + D + ++AA A + Sbjct: 273 HEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAACDRGNATRKDAAGAIL---- 328 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++A + +A++ +GG+GYI E R R++ I G+G + + +L Sbjct: 329 ---YSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLYEI--GAGTSEIRRML---- 379 Query: 460 KGTNLFEQ 467 G LFE+ Sbjct: 380 IGRELFEE 387 >gi|290958932|ref|YP_003490114.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] gi|260648458|emb|CBG71569.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] Length = 608 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGHGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ L D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L D Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGTDLADFMDKAAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399 P ++R++ AL A+ DE + + A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIQVKEAAGEDFKALEALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + +A++++ GGSG+++E I ++ R++ +++ G+ Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447 >gi|254722338|ref|ZP_05184126.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A1055] Length = 569 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVEEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|65317320|ref|ZP_00390279.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012] Length = 381 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + +Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|256397917|ref|YP_003119481.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256364143|gb|ACU77640.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 609 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/294 (21%), Positives = 134/294 (45%), Gaps = 41/294 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + +DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQADGSWHIDGVKRFITSGEHDLSENIIHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLG 300 + F+VP+ D G NG +++K+G +++ T E+ F G+LLG Sbjct: 224 KGLSLFIVPKYDFDWETGELGERNGAYVTNVEHKMGLKASTTCEVTFGQNGVPAKGWLLG 283 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------I 348 +++ + + + ++S + A+ YA++R V G Sbjct: 284 EVHDGIAQMFTIIEFARMMVGTKAISTLSTGYLNALEYAKQR-VQGSDLTVPGKDAPRVT 342 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLA---NSFDEAKSRSEEAAYAR----IMAPITK 401 + P ++R++ + +L A ++ ++A++ E +A ++ PI K Sbjct: 343 ITHHPDVRRSLMTQKAYVEGMRSLVLYTATHQDAIEQARAAGTEDKHAERMNDLLLPIVK 402 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + + + +A+A++ GGSG+++E + ++ R++ +S+ G+ LD+ Sbjct: 403 GYGSEKSYEQLAQALQIFGGSGFLQEYPLEQYIRDAKIDSLYEGTTAIQSLDLF 456 >gi|254488050|ref|ZP_05101255.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214044919|gb|EEB85557.1| acyl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 393 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + +DG Y L+G K F+S SDA++ + + + Sbjct: 137 LTEPGSGSDAAALKTKCDRTNDG-YILNGTKSFISGGGYSDAYVAMVRTSDNGSAGVSTV 195 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317 +EDG+ +GL + L++K+G RS T +++F N G L+G E+ K Y Sbjct: 196 YVEDGT-DGLSFGGLEDKMGWRSQPTAQVQFDNCTIPAGNLVG---------EEGKGFKY 245 Query: 318 ---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ A S+ + +L + Y R G + ++ +AD+ +++ A Sbjct: 246 AMMGLDGGRLNIAACSLGAAQTALTSTLDYMGDRKAFGQSIDQFQGLQWRLADMEIELQA 305 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + A D A A + K + + ++ + ++ GG GY+ + Sbjct: 306 ARTFLRQAAWKLDNG------APDATKFCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADY 359 Query: 429 SIARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 360 GIEKLVRDLRVHQILEGTNEIM 381 >gi|91093605|ref|XP_966609.1| PREDICTED: similar to GA17761-PA isoform 1 [Tribolium castaneum] gi|270015758|gb|EFA12206.1| hypothetical protein TcasGA2_TC005122 [Tribolium castaneum] Length = 423 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 36/298 (12%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLS 236 F E P T+ LTE G+D A+ + +K DG Y ++G K W + Sbjct: 142 FGNEEQKKTYLPRLATNTVSSFALTEPSSGSDAFALKTIAKK--DGSDYIINGSKMWISN 199 Query: 237 SPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 S ++ F++LA + G CF+V R +P G + + K+G ++ T L F Sbjct: 200 SDLAGVFLVLANADPSKGYKGITCFIVER----DTP-GFTVAKPEKKLGIAASGTCMLTF 254 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR 342 N +LG+ + K+ I L+ + + + LA+ I Y R Sbjct: 255 DNVRVPESAILGEFG------KGYKLAIETLNEGRIGIGAQMIGLAQGCFDATIPYTMER 308 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + M+ IA +A +I AA + + A + ++ ++EAA A K+ Sbjct: 309 MQFGKPVFSFQGMQHQIAQVATEIEAARLMVYNAARILESGQNYTKEAAMA-------KW 361 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A + ++ +GG G+ ++ + YR+ SI G+ N + + L+EK Sbjct: 362 YAAEIAQRACIKCIDWMGGVGFSKDFIQEKFYRDVKIGSIYEGTYNIHLSTIAKLIEK 419 >gi|330967954|gb|EGH68214.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 393 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|254419540|ref|ZP_05033264.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196185717|gb|EDX80693.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 594 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----EGR 252 LTE G+D+ ++ + DG Y L+G K +++ DA ++LA++ +G Sbjct: 163 LTEPGAGSDLGSLITTATPNGDGTYALNGQKIYITWGDHDATDNIIHLVLARLPDAPKGP 222 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G FL P+ +DGS NG +++K+G ++ T + + L+G N Sbjct: 223 KGISLFLAPKFAVNDDGSLGDRNGFRPVGVEHKLGIHASPTCVMSYEGARAELVGRPNEG 282 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--------LIDQ 352 + + +++A ++V V +AE A+ YA R + + D Sbjct: 283 L-----AHMFVMMNAARLAVGVEGVGIAERAYQHALAYALDRRQGRSVWTGEANAPIFDH 337 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCK 406 P ++R + + +AA A+ + D A+ E R + PI K W Sbjct: 338 PDVRRMLGVMKAKTSAARAICLSTGVAADLARHAGTEEDRRRWKAREDLFTPIAKAWSTD 397 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + V + ++ GG G+IEE A++YR++ I G+ +D++ Sbjct: 398 VGCEVASLGVQIHGGMGFIEETGAAQYYRDARIAPIYEGTNGIQAMDLVG 447 >gi|330801552|ref|XP_003288790.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium purpureum] gi|325081179|gb|EGC34705.1| mitochondrial isovaleryl-CoA dehydrogenase [Dictyostelium purpureum] Length = 411 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K ++G + L+G K W + P +D ++ A+ + G + Sbjct: 152 LAMSEPNAGSDVVSMKTNAKK-TNGGWVLNGSKMWITNGPDADVLVVYAKTDINAGSKGI 210 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + F + D NV +K+L+ Sbjct: 211 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVIGQVGSGVKVLMSG 267 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +S M+ L I Y +R G + + +M+ +AD+ + A+ + Sbjct: 268 LDYERLVLSAGPLGIMQACLDNVIPYIHQREQFGKPIGEFQLMQGKVADMYTILNASRSY 327 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D + ++ A A I+ + + A + +A++ +GG+GYI E R Sbjct: 328 VYSVAKSADNGYTSRKDCA-AVIL------YTAENATQMALQAIQTLGGNGYINEFPTGR 380 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 381 LLRDAKLYEIGAGT 394 >gi|323490502|ref|ZP_08095708.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] gi|323395768|gb|EGA88608.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] Length = 382 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 34/267 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252 + +TE G+D+A I++ + D Y ++G K F+++ ++ +++ A+ + R Sbjct: 124 IAMTEPGTGSDLANISTTAVRDGDN-YIVNGQKTFITNGINSTLVLVVVKTDPKAEPKHR 182 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS---- 305 L ++E+G+P G R +K+G + T EL F + L+G+ N Sbjct: 183 GISLL---MVEEGTP-GFEKGRKLDKVGLHAQDTSELYFEDCVVPAANLIGEENKGFTYL 238 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ ++++ L + I S + ++L Y + R G +P+ + L Sbjct: 239 MEKLQQERLVVALAAQIASEDMLDMTL----EYVKSRKAFG-----KPIGSFQNSQFKL- 288 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KYWCCKMAPAVIAEAMECIGGSG 423 A L +SF E+ A I++ ++ KYW A + E M+ GG G Sbjct: 289 --VEMATEIELGHSFLESLIEDHMAG-KDIVSKVSMAKYWLTDTAKKISGECMQLHGGYG 345 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+EE IAR YR+ P +I GS M Sbjct: 346 YMEEYKIARRYRDIPVAAIYAGSNEIM 372 >gi|296160331|ref|ZP_06843148.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295889312|gb|EFG69113.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE + G+D +A+ + + D Y L+G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRKGD-TYVLNGVKQFITSGKNGHVAIVMAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+VP G R+++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DTQGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AQGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|315503371|ref|YP_004082258.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315409990|gb|ADU08107.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 35/288 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ L +TE GG+D+A I + + D Y ++G K +++S + F+ A Sbjct: 114 PVLAGTMIGALAITEPDGGSDVAGIRTCAVRDGDH-YVVNGSKTYITSGVRADFVTTAVC 172 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G V L+ D G R K+G + T EL F + + + GP Sbjct: 173 TEFPGSGSVSLLVIDKGTPGFTVGRRLEKLGWHCSDTAELSFVD----VRVPVTNRVGP- 227 Query: 310 EDMKILIYLDSAIMS-VSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMK 356 ED L AIM + R+SLA A+ + R R G L+ + V++ Sbjct: 228 EDTGFL-----AIMQQFANERLSLATQAYATAQRCVDLAVQWCRDRQTFGRPLVGRQVVR 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++ AA A +A + E A A+ +A T W V+ A+ Sbjct: 283 HKLAEMHSRTDAARAYVHDVAERVAAGQPVVTEVAMAKNVAVATCDW-------VVDAAL 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GG GY+ + + RHYR++ LLG G + ++ KG L Sbjct: 336 QLHGGFGYMRDAEVERHYRDAR----LLGIGGGTTEIMNEIIAKGMGL 379 >gi|224053133|ref|XP_002189490.1| PREDICTED: acyl-Coenzyme A dehydrogenase, short/branched chain [Taeniopygia guttata] Length = 549 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 28/269 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ +K D Y ++G K W + + F ++A G C Sbjct: 293 LSEAGSGSDAFSLKTRAEKKGD-YYIINGSKMWISLAEDAGVFFVMANTNPSSGYRGITC 351 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V R E GL + ++K+G R+ +T + F N + + N+ + K Sbjct: 352 FVVDRNTE-----GLHVGKKEDKLGIRACSTCPVTFDNV---KVPESNILGQVGQGYKYA 403 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L++ + ++ + LA+ I Y + R G + D M+ IA +A + AA Sbjct: 404 IGMLNTGRIGIAAQMLGLAQGCFDRTIPYTKERVQFGKSVFDFQGMQHQIAQVATQLEAA 463 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A ++ +E +GG G+ + Sbjct: 464 RLLTYNAARLAEAGRPAIKEASMA-------KYFTAEVATLTTSKCIEWMGGVGFTKNYP 516 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 I ++YR+ +I G+ N + + L Sbjct: 517 IEKYYRDCKIGTIYEGTSNIQLSTIAKFL 545 >gi|182677610|ref|YP_001831756.1| acyl-CoA dehydrogenase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633493|gb|ACB94267.1| acyl-CoA dehydrogenase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 33/298 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+ TP +WAP++ ++ + LTE G+D AA+ ++ + Sbjct: 97 MIGRYGTPAQRNEWAPRLCRMDWVGS-------------YCLTEPSAGSDAAALRTRAIR 143 Query: 221 ISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 D + ++G K F+S SD ++++ + G G + L+ G+ + + K+ Sbjct: 144 EGDH-FIVNGAKQFISGGGASDVYVVMVRT-GTEGPKGISALVIFKDMEGVSFGANERKM 201 Query: 280 GNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 G + T + F N LLG+ ++ ++ + L+ A S+ G + +L Sbjct: 202 GWNTQPTCTVNFDNVMVPVSHLLGEEGDGFKIAMAGLDGGR----LNIAACSIGGAQSAL 257 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +++ Y R R G L ++ IAD+A ++AAA A + D + Sbjct: 258 DKSVQYMRERSAFGATLDRFQALQFRIADMATELAAARIFLHHAARALD------AKLPD 311 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + + K + + AV EA++ GG GY+ E I + R+ + IL G+ M Sbjct: 312 ATVTCAMAKRFATDIGFAVANEALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIM 369 >gi|167586291|ref|ZP_02378679.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 395 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDVQKEQYLPKLATGEWIGCFGLTEPNHGSDPGSMITRAKKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A++E + +LE G GL + K+G R++ T E+ + F Sbjct: 173 SPIADVFVVWAKLEEDGRDTIRGFILEKGW-KGLSAPVIHGKVGLRASITGEIVLDDVFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 L + GP L+SA ++ + AEA + R++V G Sbjct: 232 PEENRLPHVGGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFCVARH 363 >gi|38505142|gb|AAR23112.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans] gi|40388398|gb|AAR85469.1| isovaleryl-coenzyme A dehydrogenase [Emericella nidulans] Length = 430 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 27/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + +++ DG + L+G K W + Sbjct: 142 NGTPEQKARFLPGLLSGEKIGALAMSEHSAGSDVVSMKTSAKEV-DGGWVLNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + + G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTEPEKGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 LLG++N +K+L+ L+ ++S M+ +L + Y R G Sbjct: 261 PRENLLGEVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGA 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D S A + A Y + Sbjct: 315 PIAHNQLIQGKLADMHTKLAASRAYTYATARHIDSHASLGSAAIRTQDCAGAILY-AAER 373 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 374 ATECALDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 412 >gi|51893601|ref|YP_076292.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium thermophilum IAM 14863] gi|51857290|dbj|BAD41448.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium thermophilum IAM 14863] Length = 381 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 26/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AAI + + D Y L+G K F+++ + +++ A+ + VG + Sbjct: 124 LTEPGAGSDAAAIRTTAIRDGDS-YILNGEKTFITNGGQAGLYVVFARTNPDPSVGHRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI- 314 L + G + K+G ++ T L F + LLG E KI Sbjct: 183 SAFLVEADTPGFSVGKPMEKMGLHASHTTTLHFEDCRIPASQLLGKEG------EGFKIA 236 Query: 315 LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ V + +A I +A+ RH G + + + IAD+A D+ AA Sbjct: 237 MAILDRGRIGIAAQAVGITQAALEDSIKFAKERHTFGKPIAEHQAIAWKIADMATDLEAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R A + ++E + A++ A +MA EA++ GG GY++E Sbjct: 297 RLLLYRAAFLMQQGVRATKEISMAKLFA-------SEMAMKHTVEAVQIHGGYGYMQEYR 349 Query: 430 IARHYRESPANSILLGS 446 + R RE+ + G+ Sbjct: 350 VERLMREAKITQLYEGT 366 >gi|114048154|ref|YP_738704.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-7] gi|113889596|gb|ABI43647.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-7] Length = 385 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S S +++ G+ G + + Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQPGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E AY + K + + V A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|309810327|ref|ZP_07704164.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185] gi|308435719|gb|EFP59514.1| acyl-CoA dehydrogenase [Dermacoccus sp. Ellin185] Length = 389 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 28/259 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR-V 253 GL+E+ G+D A++ ++ ++ D Y L+G K W ++ S+ + +LA + GR + Sbjct: 130 GLSEREAGSDTASMKTKAKRDGDH-YVLNGQKSWITNAGESEFYTVLAVTDPDGERGRNI 188 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V + S G + + K+G + + T EL F N + + + +K Sbjct: 189 SAFVVEK-----SDEGFSFGEPERKLGIKGSPTRELHFDNC---RIPADRIVGAEGDGLK 240 Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L LD +++ V +A+ A+ Y + R G + + ++ +AD+A+ + Sbjct: 241 IALRTLDHTRVTIGAQAVGIAQGALDYAVGYVKERQQFGKAIAEFQAIQFMLADMAMKVE 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + A AKS ++A + K + +A V +A++ +GG+GY+++ Sbjct: 301 TARQMVYVAA-----AKSERQDADLS-FFGAAAKCFASDVAMEVTTDAVQLLGGAGYVKD 354 Query: 428 RSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 355 FPVERMMRDAKITQIYEGT 373 >gi|260063568|ref|YP_003196648.1| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501] gi|257796364|gb|EAR14186.2| butyryl-CoA dehydrogenase [Robiginitalea biformata HTCC2501] Length = 387 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 137/296 (46%), Gaps = 30/296 (10%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +F E P T+ IG GLTE G+D + + +K D + L+G K F++ Sbjct: 108 LFGDEEQKQRWIPKLATAEWIGAWGLTEHNTGSDAGGMNTTAKKDGDH-WVLNGAKNFIT 166 Query: 237 SPMSDAFIMLAQVEGRVGCF--LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 +S ++ G G + ++E G+P G + ++K+G R++ T EL F + Sbjct: 167 HGISGDVAVIIARTGEKGDSRGMTAFVVEKGTP-GFSSGKKEDKLGMRASETAELIFEDC 225 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 G LG V G ++ MK+L D +S+ + + +A+ A ++ + Sbjct: 226 RIPDGNRLGP--VGEGFIQSMKVL---DGGRISIGALSLGVAKGAFEASLKYSKERVQFG 280 Query: 352 QPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 +P+ + +A++A +I AA + + + K ++++A A++ A C + Sbjct: 281 KPISAFQGISFKLAEMATEIEAAELMVHKAGFLKNAGKPVTQQSAMAKMYASEV---CVR 337 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLE 459 +A EA++ GG GYI E + + YR++ +I G G + V+ NLL+ Sbjct: 338 VAN----EAVQIHGGYGYIREFPVEKFYRDAKLCTI--GEGTTEIQKVVISKNLLK 387 >gi|254485996|ref|ZP_05099201.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214042865|gb|EEB83503.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 392 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 20/267 (7%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 GLTE+ G+D +T+ ++ DG + L+G K F+ P D I+ A+ + G + V Sbjct: 138 GLTERETGSDAMKMTTTARE-RDGGFVLNGAKAFVGMGPACDLAIVFAKTDPDKGAWGVS 196 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312 L + S G K+G R+ L F N + G + +++ +E Sbjct: 197 AFLVETSDAGFIRGAADEKMGLRTVPLGPLGFDNCWIPKDRLLGPVGAGMSIFQHTMEWE 256 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + I+ V M L + YAR R G +ID + +AD+ L + + L Sbjct: 257 RCFIFSSH----VGAMARQLKDCTAYARSRETFGVPIIDHQSVSNRLADMRLRLETSRLL 312 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A+ D+ + EAA A++ I++ + A +A+ GG GY+ + R Sbjct: 313 LYRAASLKDKKRPAPLEAAMAKLH--ISEAFA-----ASSLDAVRIFGGRGYLSADGVER 365 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLE 459 R++ A I G+ + + LL+ Sbjct: 366 DLRDATAGLIYSGTSDIQRQIIARLLD 392 >gi|71021499|ref|XP_760980.1| hypothetical protein UM04833.1 [Ustilago maydis 521] gi|46101055|gb|EAK86288.1| hypothetical protein UM04833.1 [Ustilago maydis 521] Length = 424 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L ++E G+D+ ++T+ K D G W ++P+S FI+ A+ + + G + Sbjct: 165 LAMSEPDAGSDVVSMTTTAVKDGDDWVLNGGKMWITNAPISSTFIVYAKTDVKAGSKGIT 224 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + + G +K+G R + T E+ F N +LG +N ++ Sbjct: 225 AFILERGMTGFTTLPKLDKVGMRGSDTGEIHFDNVRVPATNVLGTVNRGAAV-----LMS 279 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366 LD + +SG + LA+ A+ YA +R +QP+ M+ IAD+ I Sbjct: 280 GLDLERLVLSGGPLGLAQCAFDYAVRYAHQRK-----QFNQPIAHFQLMQAKIADMYTKI 334 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +AA + + +A + D + A A + + A V ++AM+ +G +GY Sbjct: 335 SAARSYVYAVARACDLGHISRRDCAGAIL-------YASDRAVEVSSDAMQILGANGYTN 387 Query: 427 ERSIARHYRESPANSILLGS 446 + I R +R++ ++ G+ Sbjct: 388 DYGIDRMWRDARLYTVGAGT 407 >gi|301630363|ref|XP_002944291.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 395 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 23/329 (6%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + R D KA P + +G L ++E Sbjct: 77 HMVAMEEISRASASVGLSYGAHSNLCVNQIQRNGDAAQKARYLPRLISGEHVGALAMSEP 136 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ + + + G Y L+G K W + P +D ++ A+ E +G V L + Sbjct: 137 GAGSDVMGMQLKAEA-QGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIE 195 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F N + + +V G + K+L+ LD Sbjct: 196 KGMKGFSVAQKLDKLGMRGSHTGELVFENVE---VPESHVLGGVNQGAKVLMSGLDYERA 252 Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++G M+ + + Y R G + + +++ +AD+ + A + ++ +A Sbjct: 253 VLTGGPLGIMQSVMDNVLPYIHARKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAK 312 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D E R WC + A + E ++ GG+GYI E + R +R++ Sbjct: 313 NLDLLGQ--EHVRQVRKDCASVILWCAEKATWMAGEGVQLFGGNGYINEYPLGRLWRDAK 370 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 I G+G + + +L G LF Q Sbjct: 371 LYEI--GAGTSEIRRML----IGRELFAQ 393 >gi|218663554|ref|ZP_03519484.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli IE4771] Length = 591 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/437 (20%), Positives = 176/437 (40%), Gaps = 56/437 (12%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGP-GGERW--DKVEFHPAWHALLRRSIHDGLHC 117 LGE ++ E R A L G G R +V W L R I G + Sbjct: 31 LGEDLVDAILSEAGRFATEEVAPLADIGDRQGARLIEGEVRLPDGWRELYRSWIAGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWA 175 +F + A ++ + ++P++T ++ A+ + + + Sbjct: 91 LTAPEAFGGQALPDMLNVAALEMWNSGSMA--FALAPTLTMGAIEAVSAHGSAALKDKYL 148 Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 K+ S E+ T + LTE G+D+ + ++ ++ +DG Y + G K F+ Sbjct: 149 AKMVSGEWTGT-------------MNLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFI 195 Query: 236 SSPMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKI 279 + DA ++LA++ + FLVP+ L +DGS N L L++K+ Sbjct: 196 TWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKL 255 Query: 280 GNRSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 G + T + + + G+L+G+ N + M L + V+ + Sbjct: 256 GIHGSPTCTMIYGDGRFGDEKGAIGWLVGEENKGLACMFTMMNNARLAVGMQGVAISEAA 315 Query: 332 LAEAIHYARRRHV-----SGGI----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 +A+ YAR R S G+ +++ P + R + + + A+S+ A + D Sbjct: 316 TQKALAYARERTQGRAPGSTGVGMSPIVEHPDVARMLLTMKALTQGSRAISYACAQALDM 375 Query: 383 AKSRSEEAAY---ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ + + A ++ PI K + V + ++ GG G+IEE AR+ R++ Sbjct: 376 SRRAGDNRHWQERAALLTPIAKSFSTDAGVEVASLGIQVHGGMGFIEETGAARYLRDARI 435 Query: 440 NSILLGSGNAMVLDVLN 456 I G+ +D++ Sbjct: 436 APIYEGTNGIQAIDLVT 452 >gi|194873782|ref|XP_001973277.1| GG13447 [Drosophila erecta] gi|190655060|gb|EDV52303.1| GG13447 [Drosophila erecta] Length = 414 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T +L F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + ++ V LA+ I Y R G + + M+ IA + Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A KY+ ++A + ++ +GG Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR+ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLTTIAKCIKK 410 >gi|189197671|ref|XP_001935173.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981121|gb|EDU47747.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 398 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 39/305 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + ++ K+W PK+ T+ L+E G+D A+ ++ + G Y Sbjct: 118 SEKLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDTG-Y 162 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +SG K W +S ++ FI+ A ++ + + ++E G+P G + + K+G +++ Sbjct: 163 KISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKGTP-GFAIAKKEKKLGIKAS 221 Query: 285 AT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AI 336 +T VE+ N G + G + + +I I ++G+ + E A Sbjct: 222 STCVITFDDVEIPRENLLGNEFEGYKYAIGLLNEGRIGI-----AAQMTGLALGAWENAA 276 Query: 337 HYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 YA G LI + M+ +A +I AA AL + A + + +AA A++ Sbjct: 277 SYAWNDRKQFGTLIGEFQAMQHQLAQAWTEIQAARALVYNAARKKEAGEDFITDAAMAKL 336 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 MA ++A V +A+E +GG G++ E +++R+S +I G+ N + + Sbjct: 337 MA-------SQVAGRVSGQAIEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIG 389 Query: 456 NLLEK 460 L+K Sbjct: 390 KALQK 394 >gi|170691621|ref|ZP_02882786.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] gi|170143826|gb|EDT11989.1| acyl-CoA dehydrogenase domain protein [Burkholderia graminis C4D1M] Length = 376 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE + G+D +A+ + + D Y L+G K F++S ++ I++A Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNANVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP G RL+ K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DSKGYLVARLEEKLGQHSSDTAQIIFDDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGQPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|66043772|ref|YP_233613.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] gi|63254479|gb|AAY35575.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Pseudomonas syringae pv. syringae B728a] Length = 600 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + +G Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 V+G + F+VP+ L EDGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPGGVKG-ISLFIVPKFLVNEDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ +G SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|330880073|gb|EGH14222.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 393 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|326329059|ref|ZP_08195388.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325953141|gb|EGD45152.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 378 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 40/296 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T +W PK+ S E V + +TE G+D+ I ++ K D Y Sbjct: 98 TEEQKNEWLPKLASGE-------------VVSAIAMTEPGTGSDLQGIRTKAIKDGDE-Y 143 Query: 227 CLSGHKWFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ + +++A + + +VP E G R+ +KIG Sbjct: 144 VVNGAKTFITNGLLADMVLVAVKTDPEEAAAGISLVIVPTDAE-----GFRRGRVLDKIG 198 Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEA 335 + T EL F + LLGD G V+ M L L A+ SV+ M E Sbjct: 199 MKGQDTCELFFDDVRIPASNLLGDKE-GDGFVQLMMQLPQERLIVAVGSVAAMEFCFEET 257 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYAR 394 + Y R G + K +A+IA + R+A SF DE + Sbjct: 258 LRYVNERTAFGRPVFGFQNTKFEMAEIATEA--------RVARSFIDECVELHVKGELDI 309 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + KYW + A V+ + ++ GG G++EE IAR + + I G+ M Sbjct: 310 PTAAMAKYWSSERAGIVVDKCLQLFGGYGFMEEYPIARAFTDLRVQRIYAGTTEIM 365 >gi|78222919|ref|YP_384666.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15] gi|78194174|gb|ABB31941.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens GS-15] Length = 386 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 51/307 (16%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A ++ ++ + + + PKI S EY A LTE G+D A + +Q Sbjct: 95 AAEVIQVVGSEEQKRAYIPKICSGEYS------------AASFALTETCAGSDPAGMVTQ 142 Query: 218 GQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVE-----GR-VGCFLVPRLLEDGSPNG 269 + DG + L+G K F++S + F++ A + G+ + CFLV E G+P G Sbjct: 143 A--VDDGDSWVLNGSKIFITSASYAGVFVVWAVTDKAAPKGKGISCFLV----EAGTP-G 195 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAI 322 L + ++K+G ++AT E+ F++ ++G LN ++ + +I I Sbjct: 196 LIIGKEEHKMGQHASATNEVIFTDCRIPKSAMMGKLNDGFRIAVAELAGGRIGI------ 249 Query: 323 MSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 G+ V LA A YA R G + + ++ +AD ++ AA L A Sbjct: 250 -GSLGLGVGLAAMDHATRYASERTQFGQKISNFQAIQWMVADAYTELEAARLLLMNAAFR 308 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D+ KS ++EA+ A++ A C A++ +GG GY ++ + R+ R++ Sbjct: 309 KDQGKSFAKEASMAKLYATEAANRACYA-------AIQMLGGYGYTQDFPVERYARDARI 361 Query: 440 NSILLGS 446 SI G+ Sbjct: 362 TSIYEGT 368 >gi|291486303|dbj|BAI87378.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. natto BEST195] Length = 379 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 33/282 (11%) Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 T +A+G LTE R G+D ++ + ++I D Y L+G K F+++ ++D +I+ A Sbjct: 112 TQLALGEKIGAFALTEARSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170 Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + + F+V + E G + + K+G RS+ T E+ F + L Sbjct: 171 VTDPEKKKKGITAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 E KI + LD ++ V +A+ A+ YA+ R G + +Q + Sbjct: 226 GQEG---EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIGEQQGIA 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I A+ L+++ A + +A +++MA T A V EA+ Sbjct: 283 FKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTTEAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + GG GY ++ + R+ R++ I G+ L + +L Sbjct: 336 QIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377 >gi|167033373|ref|YP_001668604.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166859861|gb|ABY98268.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 589 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + A + LTE GTD+ I ++ + +DG Y +SG K F++ D + Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSYRISGSKIFITGGEQDLTENIVHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP+ + G+ N +++K+G +++AT + F Sbjct: 214 VLAKLPDAPAGAKGISLFLVPKYQVEANGQLGARNAAHCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGGIL 349 FG+L+G+ N + M L I + S A YA + R SG Sbjct: 274 AFGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAASGPQA 333 Query: 350 IDQ---PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 D+ P++ R + + AA LA ++A R + Sbjct: 334 QDKAADPIIHHGDVRRMLLTMRTLTEGGRAFAAYVGQQLDLARYAEDAGEREHAQRLVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|56695488|ref|YP_165835.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56677225|gb|AAV93891.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 385 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 17/292 (5%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 +AP+ F ++ P + + + L +TE GG+D+A ++++ +++ G + L+G K Sbjct: 104 QFAPEPFRQDILPR----IVRGEMNSALAITEPGGGSDVANLSTRAARVAGG-WVLNGAK 158 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +++ M + ++ G G + L + G L K+G + L F Sbjct: 159 AYITGGMDAQWFVVGARTGGPGLAGISLFLIEADTPGFSRTPLGGKMGWHCSTQAMLHFD 218 Query: 293 NTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 + L+G N + + L S+ MRV A+ +AR R G L Sbjct: 219 DCHVPEAALIGPENKGFLAIMNNFNHERLAMVAGSLGMMRVCYRSALDWARERRTFGQRL 278 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 I+ V+ A+++ I A R+ + ++ + E A A++ A K Sbjct: 279 IEHQVIAHKFAEMSARIDMTEAYLERICWAMNQGLMPAAEIAKAKVQA-------TKALE 331 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 V +E M+ GG+GY+ + R +RE +I G G+ +L L + + G Sbjct: 332 FVASEGMQIFGGAGYLTGNPVERVWREVKVMAI--GGGSEEILRDLAVRQMG 381 >gi|20807046|ref|NP_622217.1| Acyl-CoA dehydrogenase [Thermoanaerobacter tengcongensis MB4] gi|20515533|gb|AAM23821.1| Acyl-CoA dehydrogenases [Thermoanaerobacter tengcongensis MB4] Length = 380 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 20/275 (7%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238 ++E P+ + LTE GTD A I + D Y L+G K F+++ Sbjct: 103 TKEQKEKYLVPLARGEKLGAFALTEPNAGTDAAGIQTTATLEGDH-YVLNGCKIFITNGG 161 Query: 239 MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 ++D +I+ A+ + G + ++E G P G +++ K+G R + EL F + Sbjct: 162 VADVYIVFAKTDKSQGAKGISAFIVEKGFP-GFSIGKIEEKMGIRGSRAAELVFEDC--- 217 Query: 298 LLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351 ++ N+ E KI ++ LD + + + +A+A I Y + R G + Sbjct: 218 IVPKENLLGKEGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVIKYVKERQQFGRPIGK 277 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ IA++A ++AA L + A + S S EAA A++ A T A V Sbjct: 278 FQGLQWYIAEMATKVSAARHLVYYAAWRKENNLSYSMEAAMAKLFASET-------AMEV 330 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY ++ + R R++ I G+ Sbjct: 331 TTKAVQIFGGYGYTKDYPVERLMRDAKITEIYEGT 365 >gi|319787343|ref|YP_004146818.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] gi|317465855|gb|ADV27587.1| acyl-CoA dehydrogenase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 387 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 18/238 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE GG+D A + + +K G + ++G K W + ++D I+ AQ + + F+V Sbjct: 133 FGLTEPHGGSDPANMKTHAKK-DGGDWVINGSKMWITNGNLADIAIVWAQTDEGIQGFIV 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 E G+P G Q +K+K+ R++ T L F N L ++ GP+ + Sbjct: 192 ----EKGTP-GFTAQEIKHKMSLRASVTSSLFFDNVRVPDSARLPNVKGLKGPLGCLTQA 246 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y V L EA++Y++ R + G + + +AD+A I A L + Sbjct: 247 RY-GITWGPVGAAIACLDEALNYSKERILFGRPVAATQSAQIKLADMARRITLAQLLVLQ 305 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L D + ++ + A K+ C+MA + E + +GG+G E + RH Sbjct: 306 LGRLKDAGTMQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHAAIRH 356 >gi|170739921|ref|YP_001768576.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168194195|gb|ACA16142.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 415 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 32/257 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D A + ++ +KI DG Y LSG K W ++P++D F++ A Sbjct: 146 PKLATGEFVGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLSGAKTWISNAPIADVFVVWA 204 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + + ++ F +LE G GL ++K K+ R++ T E+ LL Sbjct: 205 KSPAHDNQIRGF----VLEKGM-KGLSAPKIKGKLSLRASVTGEIVMDGVEVPESALLPH 259 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 ++ GP L+ A +S + AE A Y R G L +++ Sbjct: 260 VSGLKGP------FGCLNRARYGISWGALGAAEDCWHRARQYTLDRTQFGRPLAQTQLVQ 313 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 R +AD+ +IA S R+ FDE + E M I K C A + A Sbjct: 314 RKLADMQTEIALGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALEIARTAR 366 Query: 417 ECIGGSGYIEERSIARH 433 + GG+G + E + RH Sbjct: 367 DMHGGNGIMGEYHVMRH 383 >gi|269127099|ref|YP_003300469.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312057|gb|ACY98431.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 375 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256 L+E G+D AA++++ + D Y ++G K W +D +++ A+ GR + F Sbjct: 121 LSEPHAGSDAAALSTRAVRDGDH-YVITGTKAWITHGGEADFYVLFARTSDDGGRGISAF 179 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+ DG +GL + + K+G + T +L F + + + L Sbjct: 180 LI-----DGRMDGLSFGPPERKMGLTGSTTAQLLFDGAR--VPAERRIGAEGQGFPIALS 232 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ V LA EA+ YAR+R G +I+ + +AD+A + +A A Sbjct: 233 ALDSGRLGIAACAVGLAQGALDEAVAYARQREQFGRPIIEHQGLGFLLADMAAAVESARA 292 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D S +A+ A+++A A V +A++ +GG GY + + Sbjct: 293 TYLEAARRRDRGLPFSRQASIAKLVA-------TDAAMKVTTDAVQVLGGYGYTRDFPVE 345 Query: 432 RHYRESPANSILLGS 446 R RE+ I G+ Sbjct: 346 RFMREAKVMQIFEGT 360 >gi|85710278|ref|ZP_01041343.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp. NAP1] gi|85688988|gb|EAQ28992.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter sp. NAP1] Length = 387 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 26/263 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 + +TE G+D+ +IT+ K +G Y ++G K ++S+ + FI++ E G Sbjct: 131 IAMTEPGVGSDLQSITTTALKDGNG-YRINGSKTYISNGQTADFIVVVAKTNPEERAKGI 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVS----TG 307 L+ LLE G R +KIG + T EL F N F L G+ G Sbjct: 190 SLM--LLETEGAEGFQRGRKLDKIGLDAADTSELFFDNVFVPAENVLGGEEGKGFYQLMG 247 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +++I + +A +G+ +L + Y + R G + D + +AD+ A Sbjct: 248 ELAQERLVIAMGAA----TGIEKALETTLDYVKERKAFGQTIWDFQNTQFVLADLK---A 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 TA + + AK E A A + KYW ++ V+ + ++ GG+GYI + Sbjct: 301 RGTAARVFVNDCI--AKLLKGELDVA--TAAMAKYWVTELQSEVVDKCLQLHGGAGYIND 356 Query: 428 RSIARHYRESPANSILLGSGNAM 450 IA+ YR++ I GS M Sbjct: 357 YPIAKMYRDARITRIFGGSNEVM 379 >gi|330952465|gb|EGH52725.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae Cit 7] Length = 393 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|295689060|ref|YP_003592753.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295430963|gb|ADG10135.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC 21756] Length = 379 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + K+ Y L+G K F+S +SD ++++A+ G + Sbjct: 124 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDVYVVMARTGGEGAKGVSAF 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308 ++E G+P GL + + K+G + T ++ F N GF + + G Sbjct: 183 VVEKGTP-GLSFGANERKMGWNAQPTAQVNFDNCRVPVENRIGQEGEGFRFAMMGLDGG- 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ A S+ G + +L A Y R+ G L D ++ +AD+A ++ A Sbjct: 241 --------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + R A++ D + + + + K + V +A++ GG GY+++ Sbjct: 293 ARLMVRRAAHALDNKHPEATK------LCAMAKRFATDAGFQVANDALQLHGGYGYLQDY 346 Query: 429 SIARHYRESPANSILLGSGNAM 450 + R R+ + IL G+ M Sbjct: 347 PLERIVRDLRVHQILEGTNEIM 368 >gi|256824703|ref|YP_003148663.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] gi|256688096|gb|ACV05898.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] Length = 389 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 17/280 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + + GL+E G+D A + + + SDG + L+G K W ++ +S+ + ++A Sbjct: 116 PVAEGTAMFSYGLSEAGAGSDTAGMQCKAIEQSDGSFVLNGQKSWITNAGVSEYYTVMAV 175 Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 EG+ G + ++E G + + K+G + + T EL F N + D V Sbjct: 176 TDPEGKRGKNITAFVVEK-DDEGFSFGEPEGKLGIKGSPTRELLFDNC--VIPADRMVGE 232 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 L LD +++ + +A+ A+ Y ++R G + D ++ +AD Sbjct: 233 RGRGLAIALQTLDHTRVTIGAQAIGIAQGALDAALDYVKQREQFGQRIADFQGVQFMLAD 292 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + + AA L + A AKS + A A K + +A + +A++ GG Sbjct: 293 MGMKLEAARQLVYNAA-----AKSERNDPALTYFGA-AAKCFASDVAMEITTDAVQLFGG 346 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 GY ++ + R R++ I G+ + + L KG Sbjct: 347 YGYTKDFPVERMMRDAKITQIYEGTNQIQRMVMARQLLKG 386 >gi|113867310|ref|YP_725799.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113526086|emb|CAJ92431.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 379 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/353 (21%), Positives = 132/353 (37%), Gaps = 47/353 (13%) Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172 +GL C + H A Y A L S A +A + + Sbjct: 51 EGLLCVTLPTEYGGGGGDFGHSAIYAEEYARAGLSGVGFGVHSDIIAPYIARIGNEEQKQ 110 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S EY + +G+TE G+D+ AI + + D Y ++G K Sbjct: 111 RWLPKVCSGEY-------------ILAIGMTEPGTGSDLKAIRTTATRDGDE-YVINGSK 156 Query: 233 WFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+S+ + +D IM+ + + G V ++ + G R +K+G + T EL F Sbjct: 157 TFISNGLNADLIIMVCKTDPTAGARGVSLIVVEAEREGFRRGRKLDKVGQHAQDTAELFF 216 Query: 292 SNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 N F +L+ +L P E + I A+ + + + V L + Sbjct: 217 DNVRVPVANLLGEEGKGFAYLMAEL-----PQERLSI------AVSAAAKLEVCLEHTLA 265 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y + R + D K +ADI + L + EEAA A++ A Sbjct: 266 YVKDRKAFSQTVWDFQNTKFKLADIKTQAISVRLLVDHYLGEHIRRRLTLEEAAIAKLHA 325 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ + + ++ GG GY+ E +AR + + I G+ M Sbjct: 326 -------TEVLGTALDQMVQLHGGYGYMMEYPVARAFADMRVTRIYGGTSEVM 371 >gi|121594363|ref|YP_986259.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120606443|gb|ABM42183.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 388 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 30/263 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254 LTE G+D A+I ++ + + + Y ++G K F+S S D +++A+ G + Sbjct: 124 LTEPGAGSDAASIKTRAELVGN-EYVINGSKAFISGAGSTDVLVLMARTGDAQSGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307 F VP L G+ Y + + K+G S T ++ F N LLG ++ Sbjct: 183 AFAVPANLP-----GIHYGKKEEKMGWNSQPTRQISFDNVRIPANHLLGQEGEGFKIAMK 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A SV + +L A Y + R G + ++ +AD+A ++ Sbjct: 238 GLDGGRINI----ATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELV 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA S +A +R A + K + + V+ EA++ GG GYI E Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDVGFNVVNEALQLHGGYGYIRE 347 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + R R++ + IL G+ M Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370 >gi|108798036|ref|YP_638233.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119867131|ref|YP_937083.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108768455|gb|ABG07177.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119693220|gb|ABL90293.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 388 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 62/385 (16%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ P +LR + G+ +I+ R E V ++ A R++ QL A Sbjct: 27 PYASEWDESHHFPT--DVLREAAELGM-AAIYCR--EDVGGSGLRRVDAVRIF--EQLSA 79 Query: 149 GH-----LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 +S A MV + K W P++ S E S+A LT Sbjct: 80 ADPAIAAFLSIHNMCAWMVDTYGSEEQRKTWVPRLASME------------SIA-SYCLT 126 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL 262 E G+D +A+ ++ + D + L G K F+S + SD ++++A+ G G + + Sbjct: 127 EPGAGSDASALRTKAVREGDH-FVLDGVKQFISGAGSSDVYVVMART-GSDGPRGISAFV 184 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVS 305 + G+ + + K+G + T ++ F FG + LN Sbjct: 185 VEKDTPGVSFGAQEQKMGWNAQPTAQVVFEGARVPAENMLGGTDAEGSGFGIAMNGLNGG 244 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 L+ A S+ G + + +A Y R G L+D+P ++ +AD+A Sbjct: 245 R-----------LNIAACSLGGAQTAYEKAAAYLADRQAFGASLLDEPTIRFTLADMATA 293 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + + L +R A + DE E + + K + V +A++ GG GY+ Sbjct: 294 LQTSRTLLWRAAGALDENHPDKVE------LCAMAKRYVTDACYEVADQALQLHGGYGYL 347 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E I + R+ + IL GS M Sbjct: 348 REYGIEKIVRDLRVHRILEGSNEIM 372 >gi|254417897|ref|ZP_05031621.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196184074|gb|EDX79050.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 387 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 34/278 (12%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248 +Q + + +TE G+D+ + + K +G Y ++G K F+++ FI++ Sbjct: 122 LQSGELVGAIAMTEPGAGSDLQGVKTTAVKSGNG-YVVNGSKTFITNGQLANFIIVVAKT 180 Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-- 304 EG G L+ ++E G R +KIG N T EL F++ + GD N+ Sbjct: 181 DPAEGAKGTSLI--VVETDGAEGFERGRNLHKIGMEGNDTSELFFNDVK--VPGD-NIIG 235 Query: 305 ---STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G V+ M+ L L+ A+ V+ L + Y + R G +ID + + Sbjct: 236 GAEGQGFVQLMQQLPQERLNIAVQGVAAAERGLEATLAYVKERKAFGKRVIDFQNTQFKL 295 Query: 360 ADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 A++ + A + L D A A + KYW + I E Sbjct: 296 AEVKTKLTVAKVFVDHCIGLHLKGQLDAA------------TASMAKYWVTDIQGETIDE 343 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 ++ GG GY+ E +IA+ Y+++ I G+ M L Sbjct: 344 MLQLHGGYGYMNEYAIAQLYKDARVQRIYGGTNEIMKL 381 >gi|113970930|ref|YP_734723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sp. MR-4] gi|113885614|gb|ABI39666.1| acyl-CoA dehydrogenase domain protein [Shewanella sp. MR-4] Length = 385 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S S +++ G+ G + + Sbjct: 124 LTEPGAGSDAASLQTKAVREGDE-YVVSGSKMFISGAGSTELLVVMCRTGQPGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 183 AIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E AY + K + + V A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|327480526|gb|AEA83836.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 379 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 30/273 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P+ + LTE + G+D +++ ++ ++ D Y L+G K F++S +++ Sbjct: 110 GPLARGEQIGAFALTEPQAGSDASSLRTRARRDGDH-YVLNGAKQFITSGKHAGTVIVFA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295 V G+ G F+VP SP G R+++K+G ++ T ++ F +N Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRL 223 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G ++ +E +I I A +V R + A YAR R G +++ + Sbjct: 224 GEEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYARERETFGKPIVEHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A IA A + A + E A + A + K + +MA V + A Sbjct: 280 AFRLADMATQIAVARQM-------VHHAAALREAGRPALVEASMAKLFASEMAERVCSAA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG GY+ + + R YR+ I G+ + Sbjct: 333 IQTLGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|171057878|ref|YP_001790227.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170775323|gb|ACB33462.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 394 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A+ EG + F Sbjct: 139 FGLTEPNHGSDPGSMITRAKKVPGG-YSLSGAKMWITNSPIADVFVVWAKDDEGAIRGF- 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ F D+ GP Sbjct: 197 ---VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPDVRGLKGP------ 246 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AE A Y R G L ++++ +AD+ DI+ Sbjct: 247 FTCLNSARYGIAWGALGAAEDCFQRARQYTMDRKQFGKPLAANQLIQKKLADMLTDISLG 306 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C A + A + +GG+G +E Sbjct: 307 LQGCLRLGRMKDEGSASVE-------VTSIMKRNSCGKALDIARVARDMLGGNGISDEFG 359 Query: 430 IARH 433 +ARH Sbjct: 360 VARH 363 >gi|126651027|ref|ZP_01723238.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] gi|126592228|gb|EAZ86277.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] Length = 382 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 121/290 (41%), Gaps = 41/290 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 W PK S +Y + +TE G+D+A I Q I DG Y ++G K Sbjct: 111 WLPKCISGDY-------------ITAIAMTEPGTGSDLANI--QTTAIRDGDHYIVNGQK 155 Query: 233 WFLSSPMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F+++ + ++A + G L+ ++E+G+P G R K+G + T Sbjct: 156 TFITNGIHTNLAVVAVKTNPSAEKKHQGISLL--VIEEGTP-GFTKGRKLEKVGMHAQDT 212 Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341 EL F + LLG+ G V M+ L L AI + LA ++Y + Sbjct: 213 AELFFEDCRVPVQNLLGE--EGKGFVYMMEKLQQERLAVAIAAQIATEDMLALTLNYVKS 270 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APIT 400 R G + D + IA++A + + SF E+ A + + Sbjct: 271 RQAFGKSIGDFQNTQFKIAEMATKM--------EIGKSFLESLIEEHLAGKDVVTKVSMA 322 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 KYW + A + + M+ GG GY+EE IAR YR+ P SI G+ M Sbjct: 323 KYWITENAREIATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372 >gi|76801448|ref|YP_326456.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160] gi|76557313|emb|CAI48889.1| acyl-CoA dehydrogenase 5 [Natronomonas pharaonis DSM 2160] Length = 381 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 27/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D+ A+ + +K D Y ++G K W + ++D + A+ Sbjct: 113 PLAQGEEIGAFALSEAGAGSDVPAMGTTAEKDGD-EYVINGDKLWISNGSVADTVTVFAK 171 Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 + G + ++ + +G + ++K+G++ T EL F + LLGD Sbjct: 172 TDPEAGNKGISSFIVRPDTDDGFYVEGTEDKLGDKGCPTAELRFDDLRIPESRLLGD--E 229 Query: 305 STGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357 G V+ +K L + A SV + +L EA YA+ R DQP+ ++ Sbjct: 230 GRGFVQALKTLNGGRITIAARSVGIAQAALDEAADYAQDRE-----QFDQPISDFQAIQH 284 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ AA L A+ +S ++EAA A++ + +++ V E ++ Sbjct: 285 KLADMDTKTRAARLLMHDAADKKIRGESFAKEAAQAKL-------YASEVSREVANEGIQ 337 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY ++ R YR++ N I G+ Sbjct: 338 IHGGYGYTKDFPAERFYRDAKLNEIYEGT 366 >gi|332668315|ref|YP_004451103.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337129|gb|AEE54230.1| acyl-CoA dehydrogenase domain-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 601 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 40/309 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAF-----IMLAQVEGR- 252 + LTE + G+ ++ ITS + ++DG Y + G K ++S +A ++LA+++G Sbjct: 162 MALTEPQAGSSLSDITSSAEPVNDGEYYKIKGQKIYISGGDHNAVDNVVHLLLARIKGAP 221 Query: 253 -----VGCFLVPRL-LEDGS--PNGLCYQRLKNKIGNRSNATVEL----EFSNTFGFLLG 300 + F+VP+L E+G N + + K+G + L + + G+L+G Sbjct: 222 VGTKGISLFVVPKLRYENGELVTNDVTTAGIYGKMGQKGYVAAHLMMGEQHDDCRGYLVG 281 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGGIL 349 N + M + + +++ + + ++ YA R H ++ Sbjct: 282 QPNQGLRYMFQMMNEARIGTGMVAAATASAAYYASLKYANERPQGRHPSNKDVHQPQVLI 341 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYA----RIMAPITKYWC 404 I+ ++R + + + AL + + D A + E+A A ++ PI K + Sbjct: 342 IEHADVRRMLLYQKAIVEGSIALLLQCSLYGDLAHHGQGEDAVNANLLLELLTPIAKSYP 401 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 +M +++ M+ +GG+GY ++ + +HYR+ N+I G+ +D+L +E G Sbjct: 402 SEMGIHSVSQGMQVLGGAGYTDDFPLEQHYRDIRVNAIYEGTTTIHGMDLLGRKLTMENG 461 Query: 462 TNLFEQLFS 470 L QL S Sbjct: 462 KGL--QLLS 468 >gi|311032041|ref|ZP_07710131.1| short chain acyl-CoA dehydrogenase [Bacillus sp. m3-13] Length = 379 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 35/284 (12%) Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE 250 Q TS+ G GLTE G+D + + K+ Y L+G K F+++ ++D +++ A + Sbjct: 116 QGTSIG-GYGLTEPGSGSDAGGMRTTA-KLDGDHYVLNGSKIFITNGGIADIYVVFAVTD 173 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + + G + + K+G RS+ T E+ F D V PVE Sbjct: 174 PSSKHKGTSAFIVEADFPGFSVGKKEKKLGIRSSPTTEIIFE--------DCRV---PVE 222 Query: 311 DM--------KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 +M K+ + LD ++ V +A+ A+ YA+ R G + Q + Sbjct: 223 NMLGAEGEGFKVAMTTLDGGRNGIAAQAVGIAQGALDAAVAYAKERVQFGKPIAAQQGVS 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + A+ L+++ A E S E+A +++ A T A V EA+ Sbjct: 283 FKLADMATTVEASRLLTYQAAWRESEGLSYGLESAMSKLFAGDT-------AMKVTTEAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + GG GY ++ + R+ R++ I G+ L + +L K Sbjct: 336 QVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK 379 >gi|237741753|ref|ZP_04572234.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13] gi|294785633|ref|ZP_06750921.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27] gi|229429401|gb|EEO39613.1| acyl-CoA dehydrogenase [Fusobacterium sp. 4_1_13] gi|294487347|gb|EFG34709.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 3_1_27] Length = 381 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 25/285 (8%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ ++ ++++A + G + + + + G + + K+G R ++T EL Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215 Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341 F N LLGD + KI ++ LD + ++ + +A EAI+YA+ Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAINYAKE 269 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G L + IA++ + + AA L ++ A S +AA A++ A T Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY E + R R++ I G+ Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|229115816|ref|ZP_04245218.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228667699|gb|EEL23139.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] Length = 569 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQKISDG 224 T + + PKI S E+ IG LTE G+D ++A TS Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAILNEEGT 171 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A D+A S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIITYGAESAAYRTAGVIDDAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + R YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLAYIVDEAVQIHGGYGYMQEYEVERLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|94969396|ref|YP_591444.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis Ellin345] gi|94551446|gb|ABF41370.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 380 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 123/267 (46%), Gaps = 23/267 (8%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 P T IG GLTE G+D + + D + L+G K F+++ +D +++A Sbjct: 112 PKLATGEFIGAWGLTEPGSGSDAGGARTTAVRKGDK-WVLNGTKTFITNGHYADVVVVIA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 + + L D G + +NK+G R++ T EL F + LLG Sbjct: 171 VTDKAAHTHGLSAFLVDAGTKGFKLGKKENKLGLRASDTAELIFEDCEIPLANLLG--KE 228 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAI 359 G ++ M+IL D +S++ + + +A+ + Y++ R G + + ++ + Sbjct: 229 GDGFIDSMRIL---DGGRISIAALGLGMAQGAYEAARDYSKERKQFGKAISENQAIQWKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A +I AA L++R A D + E++ A++ + ++A V E ++ Sbjct: 286 ADMATEIDAARLLTWRAAWMKDSGMKTTLESSMAKL-------YTSEVAVRVANEGVQIH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG G+I++ + YR+ +I G+ Sbjct: 339 GGYGFIKDYPAEKFYRDVKLCTIGEGT 365 >gi|260060772|ref|YP_003193852.1| acyl-Coa dehydrogenase-like protein [Robiginitalea biformata HTCC2501] gi|88784902|gb|EAR16071.1| Acyl-CoA dehydrogenase-like protein [Robiginitalea biformata HTCC2501] Length = 392 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ A + + + D Y L+G K W ++P +D I+ A+ EGR+ + Sbjct: 136 FGLTEPDHGSNPAGMVTNFKDAGDH-YLLNGAKLWISNAPFADIAIVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G NK R++AT EL F N + N+ G L Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNV---KVPKDNLLEGKSGLGAPLGC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ YA+ R G + + ++ +A++ +I A L Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERVQFGKPIAGTQLQQKKLAEMITEITKAQLL 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +FRL +E ++ + + + A K +MA + EA + +GG G E SI R Sbjct: 307 AFRLGQLRNEGRATTAQISMA-------KRNNVEMALNIAREARQVLGGMGITGEYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|284993040|ref|YP_003411594.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284066285|gb|ADB77223.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus DSM 43160] Length = 597 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 51/304 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + L+E + G+ +A IT++ DG Y L+G+K ++S + ++LA++ G Sbjct: 163 MALSEPQAGSSLADITTRAVPQDDGTYRLTGNKMWISGGDHELTENIVHLVLAKIPGGPP 222 Query: 253 ----VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS----------N 293 + F+VP+ L D G N + L +K+G R L F Sbjct: 223 GVKGISLFIVPKFLVDPDGSLGERNDVVLAGLNHKMGYRGTTNTLLNFGEGVHTPGGRPG 282 Query: 294 TFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSG 346 G L+G+ L + + +I + + + ++ +G A+ YAR R +G Sbjct: 283 AVGHLVGEPHRGLTYMFHMMNEARIGVGMGATVLGYTGY----LHALEYARTRTQGRRAG 338 Query: 347 G--------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394 +I+ P ++R + AL A DE ++ E AR Sbjct: 339 AKDPDSPPVPIIEHPDVRRMLLAAKSYAEGGLALGLYCARLVDEEQTAETEEERARAHLL 398 Query: 395 --IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + PI K W + P A++ GG GY + + + YR++ N I G+ L Sbjct: 399 LDTLTPIAKAWPSQWGPVADDLAIQVHGGYGYTRDYPVEQFYRDNRLNPIHEGTNGIQAL 458 Query: 453 DVLN 456 D+L Sbjct: 459 DLLG 462 >gi|163855156|ref|YP_001629454.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163258884|emb|CAP41183.1| acyl-CoA dehydrogenase [Bordetella petrii] Length = 384 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 34/265 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G+GLTE GTD+ AI + ++ D Y ++G K W + + F +L + + + Sbjct: 121 GIGLTEPDCGTDLQAIRTVARRDGDA-YVINGAKMWITNGYHGNCFALLVKTDPQA---- 175 Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 PR + + P G R K+G + + EL F N + D + G VE Sbjct: 176 EPRHKGMSLFIAEKGP-GFTVSRQLEKLGYKGIDSTELVFENYR--VPADRLI--GGVEG 230 Query: 312 MKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + + L+ A V + +L E++ YA++R G + + ++ + D+A Sbjct: 231 RGLQMVLNGLELGRINVAARGVGVAQAALRESVKYAQQRKTFGKPICEHQAIQTKLGDMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A+ L R A ++D + EA A++ A T A EAM GG G Sbjct: 291 TRTEASRLLVQRAAEAYDRGERCDMEAGMAKLFATET-------AVENSLEAMRIHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y +E + R YR++P +++G G Sbjct: 344 YSKEYLVERFYRDAPL--LVIGEGT 366 >gi|77464873|ref|YP_354377.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|77389291|gb|ABA80476.1| putative acyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] Length = 403 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K + G Y LSG K W ++P++D F++ A+ E G++ Sbjct: 145 FGLTEPDAGSDTAGMKTVARKTAQG-YVLSGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F +LE G GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +H AR+ R G L + + +A++ DIA Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A A + GG+G EE Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367 Query: 430 IARH 433 + RH Sbjct: 368 VMRH 371 >gi|330869522|gb|EGH04231.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 278 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 22 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 79 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 80 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 129 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 130 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 189 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 190 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 242 Query: 430 IARH 433 IARH Sbjct: 243 IARH 246 >gi|319650928|ref|ZP_08005063.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317397284|gb|EFV77987.1| short-chain acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 376 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 37/290 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223 T + + PK+ S EY LG LTE G+D ++ S+ K D Sbjct: 102 TEEQKQKYIPKLASGEY----------------LGAFCLTEPSAGSDAGSLKSRAVKDGD 145 Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 Y ++G K F+++ +D +I+ A +G + + + GL + + ++K+G Sbjct: 146 H-YVINGSKVFITNAGEADVYIVFASTNPELGSKGISAFIVEKDTPGLVFGKDEHKMGLH 204 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI----- 336 + T++L F + + N+ E KI + LD+ + ++ + +AEA Sbjct: 205 GSRTLQLTFED---MRVPSENLLGNEGEGFKIAMANLDAGRIGIASQALGIAEAAFEAAA 261 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA+ R G + Q + +AD+A + AA L +R A+ EA+ A++ Sbjct: 262 SYAKERVQFGKPIAAQQGVGFKLADMATSVEAAKLLIYRAADMRQRGIKCGLEASMAKLF 321 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A K A V EA++ GG GY E+ + R++R++ I G+ Sbjct: 322 A-------SKTAVDVSTEAIQVFGGYGYTEDYPVERYFRDAKITEIYEGT 364 >gi|293608004|ref|ZP_06690307.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828577|gb|EFF86939.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 607 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283 Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + G L+G+ + M +I + L +A + +G A+ YA+ R V G Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388 LI ++R + ++ A AL A +S ++A+ R + Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 398 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458 Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 LD+L L +G + L E++ +T+ Q K L+D + L R Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIAQ------AKAQPSLKDHADQLDQKWQLIR 512 Query: 503 FLTEKI 508 +TEK+ Sbjct: 513 NVTEKL 518 >gi|258573685|ref|XP_002541024.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704] gi|237901290|gb|EEP75691.1| glutaryl-CoA dehydrogenase [Uncinocarpus reesii 1704] Length = 429 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 31/249 (12%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G L+G K W +SP+SD F++ A++E G++ Sbjct: 165 FGLTEPNHGSDPGSMETVARPHPTKKGYLSLTGAKTWITNSPISDLFLVWAKLEATGKIK 224 Query: 255 CFLVPRLLEDGSPNG-LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F++ R D P G L +KNK R++ T ++ N +L D+ GP Sbjct: 225 GFIIQR---DQCPTGTLETPTIKNKTALRASITGMIQLDNCPVPEENMLPDVEGLVGP-- 279 Query: 311 DMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIAL 364 L+SA + ++ G +L + I AR R+ G L ++++ +AD A Sbjct: 280 ----FTCLNSARLGIAFGTMGALEDCIDRARTYSLERKQFKGNPLAKYQLIQKKLADAAT 335 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D A T + ++A DE K E M + K C A E GG+ Sbjct: 336 DAAYGTLAAVQVARLKDEGKCTPE-------MISMIKRQNCDRALVGARTLQEVFGGNAA 388 Query: 425 IEERSIARH 433 +E I RH Sbjct: 389 SDEYHIGRH 397 >gi|78224480|ref|YP_386227.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15] gi|78195735|gb|ABB33502.1| isovaleryl-CoA dehydrogenase [Geobacter metallireducens GS-15] Length = 390 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 36/281 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D + L+G+K W + P +D ++ A+ + G + Sbjct: 129 LAMSEPGAGSDVVSMRLRADKKGD-RFILNGNKMWITNGPHADTLVVYAKTDMNAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F N + + N+ G + +L+ Sbjct: 188 TAFLIEKGFKGFSTAQKLDKLGMRGSDTCELVFENC---EVPEENILGGVGRGVNVLMSG 244 Query: 318 --LDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366 + A+++ SG M+ + + Y R DQP+ M+ IAD+ + Sbjct: 245 LDYERAVLA-SGPLGIMQACMDVVVPYLHERK-----QFDQPIGQFQLMQGKIADMYTTL 298 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +AN+ ++ ++ A A + A W + EA++C+GG+GYI Sbjct: 299 NASRAYVYAVANACTRGETSRKDCAGAILYAAEKATW-------MALEAIQCLGGNGYIN 351 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 E R R++ I G+G + + +L G LFE+ Sbjct: 352 EYPTGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 386 >gi|327310127|ref|YP_004337024.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20] gi|326946606|gb|AEA11712.1| acyl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20] Length = 381 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 32/275 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L+E G+D AAI ++ ++ G + ++GHK W + +D +++ A+ R Sbjct: 122 FALSEPCCGSDAAAIQTKAER-RGGEWVINGHKMWITNGYYADYYLLAARTGPREARHKA 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + FL+PR C + ++ G R T EL+F++ + G Sbjct: 181 ITVFLLPR--------SRCVEATPIEVMGVRGTGTAELKFNDCVVGDDDVVGEVNG---G 229 Query: 312 MKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 KI+++ LD +++SG+ V +A EA+ +AR R + G LI+ + +A++ Sbjct: 230 WKIIMHTLDVGRVAISGVAVGVARGAFEEALGWARSRELFGKRLIEMQNAQFELAEMLAS 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A L++ A +D ++S + +M+ + K ++A V A++ GG GY Sbjct: 290 IETAKTLAYYAAYLYD---TKSPDFL---LMSHVAKLQAARLAVDVTRRAVQMEGGFGYS 343 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ YR+S I G+ M + LLEK Sbjct: 344 KDSKAEMFYRDSKILEIGEGTNEVMKYVIYKLLEK 378 >gi|307946381|ref|ZP_07661716.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4] gi|307770045|gb|EFO29271.1| isovaleryl-CoA dehydrogenase 2 [Roseibium sp. TrichSKD4] Length = 390 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D I+ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKLKAEKKGD-RYILNGNKMWITNGPTADTLIIYAKTDPDAGPKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPAENVLGEVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A +V M+ ++ I Y R G + +++ +AD+ + + A+ A Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYIHERKQFGQSIGTFQLVQGKVADMYVSMNASKA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A + A + +A++ +GG+GYI E Sbjct: 306 YVYAVAQACDRGETTREDAAGAILYA-------AENATKMTLDAIQLLGGNGYINEYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|228999481|ref|ZP_04159059.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides Rock3-17] gi|228760192|gb|EEM09160.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus mycoides Rock3-17] Length = 381 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 59/318 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W PK S E + +TE G+D+A+I + +K D Y Sbjct: 103 TEEQKKRWVPKCVSGE-------------CITAIAMTEPGAGSDLASIRTTARKEGD-YY 148 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ + +D I++ + + + G L+ +LE G ++LK KIG Sbjct: 149 VVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGMSLL--VLERGMEGFKRGKKLK-KIG 205 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 S T EL F D+ V + E+ K YL + + V++A Sbjct: 206 LHSQDTAELIFE--------DVKVPASNLLGEEGKGFYYLMEKLQQ-ERLIVAIAAKAAA 256 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE------------AKSR 386 H++ + ++ ++I+D + FRLA + E A Sbjct: 257 EVMLHITKNYVQERKAFGKSISDF-------QTVQFRLAEMYTEIEIGRTFVDDCIANHM 309 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + E ++ + K+W +A V AE ++ GG GY+EE IAR YR+ P ++I G+ Sbjct: 310 NGENIVTKV--SMAKWWLTDLAKKVSAECIQLHGGYGYMEEYEIARRYRDIPVSAIYAGA 367 Query: 447 GNAMVLDVLNLLEKGTNL 464 M N++ KG L Sbjct: 368 NEIM----KNIIAKGMGL 381 >gi|262203762|ref|YP_003274970.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087109|gb|ACY23077.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 392 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 37/266 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA++++ + D Y L+G K F+S + SD ++++A+ G G + Sbjct: 132 LTEPGAGSDAAALSTKAVRSGD-EYVLTGVKQFISGAGSSDLYVVMART-GDAGPKGIST 189 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLNVS 305 L D GL + ++K+G + T ++ F FG + LN Sbjct: 190 FLVDKDSPGLSFGAQEHKMGWHAQPTAQVIFDEVRVPADRLLGAQEGIGFGIAMNGLNGG 249 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ A S+ G + + +A Y R GG L+D+P ++ +AD+A Sbjct: 250 R-----------INIAASSLGGAQAAFDKAAAYVASRKAFGGALVDEPTIRFTLADMATG 298 Query: 366 IAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ + A + D ++ + E+ A A+ T Y V A++ GG GY Sbjct: 299 LQASRLMLEHAAAALDADSPDKVEQCAMAKRFVTDTCY-------TVADSALQLHGGYGY 351 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E I + R+ + IL G+ M Sbjct: 352 LSEYGIEKIVRDLRVHRILEGTNEIM 377 >gi|227824886|ref|ZP_03989718.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21] gi|226905385|gb|EEH91303.1| acyl-CoA dehydrogenase [Acidaminococcus sp. D21] Length = 384 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD +A + D Y L+G K F+++ ++ +++ A + G + Sbjct: 123 FGLTEPSAGTDASAQQTTAVLKGDK-YILNGSKIFITNGSEAETYVIFAMTDKSAGVHGI 181 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P G + ++++K+G ++ T EL F + + N+ E KI + Sbjct: 182 SAFIVEKGMP-GFRFGKIEDKMGGHTSLTAELIFEDC---EVPKENLLGKEGEGFKIAMQ 237 Query: 318 -LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + V+ + +A+ A+ Y++ R G + + +AD+A+ I AA Sbjct: 238 TLDGGRIGVAAQALGIAQGALDAAVKYSKEREQFGRSICKFQALSFKMADMAMKIEAARL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L +R AN +E K S AA A+ A +A V +A++ GG GY + Sbjct: 298 LVYRAANLKNEGKPYSAAAAMAKCFAS-------DVAMEVTTDAVQIFGGYGYTVDYPAE 350 Query: 432 RHYRESPANSILLGS 446 R+ R + I G+ Sbjct: 351 RYMRNAKITQIYEGT 365 >gi|330809780|ref|YP_004354242.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377888|gb|AEA69238.1| butyryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 375 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ ++ LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLASGAMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGVVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G+ G F+VP SP G R+++K+G ++ T ++ F + G LG Sbjct: 170 TDPSAGKRGISAFIVP----TDSP-GYSVARVEDKLGQHASDTCQILFEDLKVPVGNRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E ++ I A +V R + A YAR R G +I+ + Sbjct: 225 EEGEGYKIALANLEGGRVGI----AAQAVGMARAAFEAARDYARERSSFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D + A + A + K + +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGQP-------ALVEASMAKLFASEMAEKVCSMAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLNDFPLERIYRDVRVCQIYEGTSD 365 >gi|78043643|ref|YP_360430.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77995758|gb|ABB14657.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 380 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 PM + + LTE G+D A++ D + L+G K F+++ +D FI A+ Sbjct: 113 PMAQGRMLGAYALTEPNSGSDAASLRLSAVDKGDH-FVLNGSKIFITNGSYADVFITFAR 171 Query: 249 V-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 EG + C +V E +P GL + K+G + T EL F N ++ Sbjct: 172 TDPATKGAEG-ITCLIV----EKNTP-GLTISKPVEKMGLNGSVTCELYFENA---IVPK 222 Query: 302 LNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355 NV E K+ + LD +++ + +AE ++Y ++R G + + Sbjct: 223 ENVLGKIGEGFKVAMQLLDGGRIAIGAQGLGIAEGAFEYTLNYIKQREQFGRPIAANQGI 282 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+A +I AA L +R A + S+EAA A K + A V + Sbjct: 283 QWMVADMATEIEAAKLLVYRAAWLKNNGLPHSKEAAMA-------KKYATDTAMRVTTDC 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ +GG GY +E + R+ R++ I G+ Sbjct: 336 VQLLGGYGYTKEYPVERYMRDAKITQIYEGT 366 >gi|224026774|ref|ZP_03645140.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM 18228] gi|224020010|gb|EEF78008.1| hypothetical protein BACCOPRO_03531 [Bacteroides coprophilus DSM 18228] Length = 569 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L G+ + G ++ ++ Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + +A I + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|198274173|ref|ZP_03206705.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135] gi|198272848|gb|EDY97117.1| hypothetical protein BACPLE_00313 [Bacteroides plebeius DSM 17135] Length = 568 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L G+ + G ++ ++ Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + +A I + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|56477122|ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56313165|emb|CAI07810.1| Glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 395 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 26/264 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T +G GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 116 FGTEAQKKKYLPKLATGEWVGCFGLTEPNHGSDPGSMVTRAKKV-DGGYSLSGSKMWITN 174 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG++ F +LE G GL + K+G R++ T E+ F Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229 Query: 296 GFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349 + + N V +K L+SA ++ + AEA + Y R G L Sbjct: 230 ---VPEENAFP-TVRGLKGPFTCLNSARFGIAWGALGAAEACYETARQYTLDRKQFGRPL 285 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++++ +AD+ +I RL DE + E + I K C + Sbjct: 286 AANQLIQKKLADMLTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSL 338 Query: 410 AVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 DIARVARDMLGGNGISDEFCVARH 362 >gi|330972659|gb|EGH72725.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 600 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + + LTE G+ ++ I ++ + +G Y L G+K F+S +S+ + L Sbjct: 152 PMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHL 211 Query: 247 ---------AQVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS 292 A V+G + F+VP+ L +DGS N + L +K+G + + L F Sbjct: 212 VLAKLPDAPAGVKG-ISLFIVPKFLVNDDGSLGKRNDVLLAGLFHKMGWKGTTSTALNFG 270 Query: 293 NT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + G+L+G L+ + + +I + L + ++ +G SL YAR R Sbjct: 271 DNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSL----DYARDR--P 324 Query: 346 GGILIDQ--------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSR 386 G L D P+++ +A + A D+ + F + + R Sbjct: 325 QGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVR 384 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K W + A++ +GG GY E + ++YR++ N I G+ Sbjct: 385 KHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGT 444 Query: 447 GNAMVLDVL--NLLEKGTNLFEQLF 469 LD+L L + G +QL Sbjct: 445 HGIQSLDLLGRKLAQNGGTGLKQLL 469 >gi|228911182|ref|ZP_04074987.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|228848358|gb|EEM93207.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] Length = 381 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A VG + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDVGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|297204595|ref|ZP_06921992.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197710663|gb|EDY54697.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 385 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 43/286 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T +W P+I S + V LTE G+D + +T++ D Sbjct: 100 TEEQKAEWLPRIASGD-------------VLASFALTEPEAGSDPSTLTTRAHLDGDDWV 146 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++ ++P++D F++ A+ + + FLVP G+P GL +K+G Sbjct: 147 INGAKRYITNAPLADVFMVFARTDPDAPRTRGISTFLVPA----GTP-GLTVAPKDHKMG 201 Query: 281 NRSNATVELEFSNT----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334 T ++ F + + GD ++ G M + + + +S + V +AE Sbjct: 202 QFGAWTADVYFDDVRVPASALVGGDAGLNRGFSTAMGCIAH---GRVHISALMVGMAERL 258 Query: 335 ---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 ++ YA R SG ++ +++ IAD D A A A FD Sbjct: 259 VDESVAYASTRKQSGKLIGSFQLVQGLIADSQTDYYAGRATVLEAARGFDAGTD------ 312 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 +I TKY+ +M V A++ GG+GY+ ++ R YR++ Sbjct: 313 -TKIGPSCTKYFASEMVWRVADRAVQVHGGAGYMRGVAVERFYRDA 357 >gi|110833694|ref|YP_692553.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2] gi|110646805|emb|CAL16281.1| acyl-CoA dehydrogenase family protein [Alcanivorax borkumensis SK2] Length = 595 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 87/367 (23%), Positives = 155/367 (42%), Gaps = 46/367 (12%) Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMT------TPRVHKDWAPKIFSREY-DPTN 187 IRA L A+ E G + P + +A+ + T T V A R + + T Sbjct: 86 IRAGFLSSRARYEEGGMQLPEIAAAACKGMFTCVNPSSTGYVFLTAAAANVIRNFGNDTL 145 Query: 188 KA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMS 240 KA PM + LTE G+ + I ++ +G Y + G K F+S + ++ Sbjct: 146 KARFLEPMMAGRFTGTMALTEPHAGSSLTDIRTRAVPQDNGSYRIKGSKIFISGGENELA 205 Query: 241 DAFI--MLAQVEGR------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATV 287 D + +LA++ G + F+VP RL +G P N + L +K+G R + Sbjct: 206 DNIVHLVLAKIPGGPVGVKGISLFVVPKYRLDNNGHPDVRNDVILAGLIHKLGYRGTTST 265 Query: 288 ELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 L F + G+L+G+ L + + ++ + + ++ G R +L A + Sbjct: 266 ALSFGDADDCHGYLVGEAHQGLRYMFQMMNEARLGVGFGAGLLGYRGYRFALDYARDRRQ 325 Query: 341 RRHVSGG-------ILIDQPVMKRAIADIALDIAAATALS---FRLANSFDEA-KSRSEE 389 RH LI+ +KR + AA A+S +RL + + ++ S+E Sbjct: 326 GRHPDDADFSKPQVPLIEHADVKRLLLTQKAYAEAAIAMSLYGYRLVDDIETGNETTSKE 385 Query: 390 A-AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A ++ P+ K W + A++ GG+GY E + + +R++ N I G+ Sbjct: 386 AELLLDLLTPVLKTWPSEFGVRANDMAIQVFGGAGYTREYPVEQVWRDNRLNPIHEGTTG 445 Query: 449 AMVLDVL 455 LD+L Sbjct: 446 VQGLDLL 452 >gi|322708406|gb|EFY99983.1| glutaryl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23] Length = 427 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ S + G + LSG K W +SP++D ++ A Sbjct: 154 MAKGKLLGAFGLTEPNHGSDPGSMESVAKPHPTKKGYFSLSGAKTWITNSPIADVLLVWA 213 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 +++ G++ FLV R +D P L +K+K G R++ T ++ + D+ Sbjct: 214 KLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDECPVPEANMFPDV 271 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 GP L+SA +S G+ +L + I AR R+ G L +++ Sbjct: 272 EGLKGPFS------CLNSARYGISMGVMGALEDCIARARTYALERKQFKGNPLAKYQLIQ 325 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD A D A T + ++ DE K+ E M + K C +A Sbjct: 326 KKLADAATDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDVALRNARILQ 378 Query: 417 ECIGGSGYIEERSIARH 433 E GG+ +E I RH Sbjct: 379 EIFGGNAVSDEYHIGRH 395 >gi|222147745|ref|YP_002548702.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] gi|221734733|gb|ACM35696.1| acyl-CoA dehydrogenase [Agrobacterium vitis S4] Length = 591 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 101/441 (22%), Positives = 178/441 (40%), Gaps = 64/441 (14%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYG--PGGERWD-KVEFHPAWHALLRRSIHDGLHC 117 L E + +E R A L A G G + D KV+ W L RR G + Sbjct: 31 LSEDLTDAILEEAGRFAANEIAPLAANGDRQGAKLVDGKVQLPDGWADLYRRWAEGGWNG 90 Query: 118 SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPK 177 + + + + H + A L + G + P +T + AL T + K Sbjct: 91 LVAEERYGG--QGLPHLLNVAALEMWNSGSMGFALGPVLTMGASEAL--TAHGSEALKEK 146 Query: 178 IFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 R A M LTE G+D+ + ++ ++ +D Y + G K +++ Sbjct: 147 FLHRMVSGEWMASMN---------LTEPHAGSDLGVMKTRAERQNDSTYRIFGQKIYITW 197 Query: 238 PMSDA-----FIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGN 281 DA ++LA++ + FLVP+ L +DGS N L L++K+G Sbjct: 198 GEHDATDNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSLGARNDLFCHSLEHKLGI 257 Query: 282 RSNATVELEFSN--------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 + T + F + G+++G+ N + M +++A ++V V++A Sbjct: 258 HGSPTCTMIFGDGRFGDDPGAIGYVIGEENKGLACMFTM-----MNNARLAVGMQGVAIA 312 Query: 334 EA-----IHYARRRH-------VSGGI--LIDQPVMKRAIADIALDIAAATALSFRLANS 379 EA YAR R G+ +I+ P + R + + A A+ + A++ Sbjct: 313 EAATQLATAYARERTQGKAPGWTGAGMSPIIEHPDVARTLLTMKALTQGARAICYSCAHA 372 Query: 380 FDEAK-SRSEEA----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 D + S +EA A A + PI K + + V + ++ GG G+IEE AR Sbjct: 373 IDMSHHSEGDEARHWQARAAFLTPIAKSFATDIGVDVASMGIQVHGGMGFIEETGAARLL 432 Query: 435 RESPANSILLGSGNAMVLDVL 455 R++ I G+ +D++ Sbjct: 433 RDARIAPIYEGTNGIQAIDLV 453 >gi|325283664|ref|YP_004256205.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] gi|324315473|gb|ADY26588.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] Length = 385 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 29/257 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 LTE + G+D A++ ++ + D + +SG K W S +D ++++A+ G V CF Sbjct: 128 LTEPQAGSDAASLKTRAVRDGDD-WLISGSKAWITSGGHADLYMVMARTGGEGARGVSCF 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309 +V E G+P GL + R + K+G + T + F ++G+ L V+ + Sbjct: 187 VV----EAGTP-GLSFGRPEEKMGQHAAHTTAVTFEGVRVPASAMIGEEGQGLIVALSSL 241 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I ++ V + +L A YA R G + + +A +A + AA Sbjct: 242 DAGRIGI----GMLGVGIAQAALEHAARYAAEREQFGKPIAAHQAVSFKLARMATQLEAA 297 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + A D+ + S+EA+ A+++ + A V +A++ GG+GY E Sbjct: 298 RLVGLKAAWLKDQGQPFSKEASMAKLLG-------SEAAVDVTRDAVQIFGGNGYSAEYP 350 Query: 430 IARHYRESPANSILLGS 446 + + YR++ I G+ Sbjct: 351 VEKLYRDAKITEIYEGT 367 >gi|254383379|ref|ZP_04998731.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194342276|gb|EDX23242.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 608 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 82/393 (20%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 Y+ N+A + +A+ + LTE G+D+ A ++ + +DG + + G K F++ Sbjct: 139 YEEGNEAQKKVAEIAVEKRWGSTMVLTEPDAGSDVGAGRTKAVQQADGSWHIEGVKRFIT 198 Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S D +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMEENILHYVLARPEGHGPGTKGLSLFLVPKFHFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333 G +++ T E+ F + G+L+GD + + M ++I ++ +++ + Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKHDG---IRQMFMIIEFARMMVGTKAIATLSTGYL 315 Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380 A+ YA+ R V G L + P ++R++ AL A+ Sbjct: 316 NALEYAKER-VQGPDLANFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQ 374 Query: 381 DEA--KSRSEEAAYARI-----MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 DE K + E A A I + PI K + + + +A++++ GGSGY++E I ++ Sbjct: 375 DEIQLKQAAGEDASAEIGLNDLLLPIVKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQY 434 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISL 493 R++ +++ G+ A+ +G + F F + +D G+S + +L ++I Sbjct: 435 IRDAKIDTLYEGT-TAI---------QGQDFF---FRKIVRDQGAS----LNVLSETIK- 476 Query: 494 CKEDKGLARFLTEKIA---LASSAAALYRAGMN 523 +FL E + LA + AL +A ++ Sbjct: 477 --------KFLAEAVGGEELAGARDALAKAAVD 501 >gi|167763198|ref|ZP_02435325.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC 43183] gi|167698492|gb|EDS15071.1| hypothetical protein BACSTE_01568 [Bacteroides stercoris ATCC 43183] Length = 568 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDETNNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|197119936|ref|YP_002140363.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] gi|197089296|gb|ACH40567.1| short-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] Length = 380 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 17/251 (6%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR- 260 TE G+D+ A+ ++ +K D Y ++G K F+++ ++D ++ A G + Sbjct: 125 TEPNAGSDLLAMKTRAEKKGDR-YVINGQKCFITNGSVADVMVVYAYTAPDKGSKGISAF 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317 ++E G+P GL Y R ++K+G R + EL F N LLG TG M+ L Sbjct: 184 VVEKGTP-GLVYGRNEHKMGMRGSINSELFFENMEIPAENLLGP--EGTGFANLMQTLST 240 Query: 318 --LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A +V + +L A+ + R R G + ++ IAD+A + AA L+ + Sbjct: 241 NRVFCAAQAVGIAQGALDIAMAHCRDRVQFGKPIAHLAPVQFMIADMATKVEAARLLTRQ 300 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + D A +S A + + K + A +V +A++ +GGSGY++E + R R Sbjct: 301 AARALD-ANDKS-----AVLYGSMAKTFASDSAMSVTTDAVQVLGGSGYMKENGVERMMR 354 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 355 DAKLTQIYTGT 365 >gi|126727131|ref|ZP_01742968.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] gi|126703559|gb|EBA02655.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] Length = 387 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 122/255 (47%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++T + +K +G Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMTLRAEK-RNGYYRLNGNKYWITNGPDADTLVVYAKTDPDAGAKGM 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVED 311 + + + G +K+G R + T EL F + F +LG+ +NV ++ Sbjct: 187 TAFIVEKTMTGFSTSPHFDKVGMRGSNTAELIFEDVEVPFENVLGEEGRGVNVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ A + M + E + Y R G + + +M+ +AD+ + +A A Sbjct: 247 ERVVL----AGIGTGIMAACMDEVMPYMVERKQFGQPIGNFQLMQGKVADMYTAMNSARA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D K ++AA + + + A +A++ +GG+GY+ + +++ Sbjct: 303 YVYEVARACDRGKVTRQDAAACVL-------YASEQAMVQAHQAVQALGGAGYLADSTVS 355 Query: 432 RHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 356 RLFRDAKLMEIGAGT 370 >gi|291523045|emb|CBK81338.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7] Length = 379 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 32/260 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFIMLAQVEGRVGCFL 257 LTE G+D +A ++ + ISDG Y ++G K F+S+ D +++A + G Sbjct: 123 LTEPGAGSDASA--AKTKAISDGDDYIINGTKCFISNMGPEEGDYVVLIALTDPSAGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + ++ D + G +L+NK+G R EL F + + N+ E KI + Sbjct: 181 MSAIVVDRNTPGFSVGKLENKMGLRGANVSELIFQDC---RVPKSNLLGKEGEGFKIAMA 237 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKRAIADIALDI 366 LD + ++ V +AE A+ YA+ R + +P+ ++ ADIA Sbjct: 238 ALDGGRIGMASQAVGIAEGAIDLAVAYAKER-----VQFKKPISANQGIQWYFADIATST 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+ + A+ ++ + AA A KY+ + A V +A++ GG GY++ Sbjct: 293 EAAKMLTLQAADLRQRGQNIGKLAAMA-------KYYASENAVTVTNKALQIHGGYGYMK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E +I R YR++ ++ G+ Sbjct: 346 EYAIERMYRDARITTLYEGT 365 >gi|256390554|ref|YP_003112118.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256356780|gb|ACU70277.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 385 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 41/281 (14%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQ 248 Q + + +TE G+D+A I + + DG Y L+G K F++ ++D +++A+ Sbjct: 115 FQSGEMMTAIAMTEPGTGSDLAGIQTTAKLSEDGRHYVLNGAKTFITGGVLADMVLVVAR 174 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 E R G + L D G R +KIG +++ T EL F+ D+ Sbjct: 175 TAPATPEDRRGGLSI--LCVDTKAAGYSVGRKLDKIGLKTSDTAELAFT--------DVP 224 Query: 304 VSTGPVEDM-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 V PVED+ K YL A+ + +L A+ Y R R V G + Sbjct: 225 V---PVEDLLGEPGKGFSYLTHNLPQERLAIAVGGYASASAALQFALDYVRERTVFGTSV 281 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 K +A+ A ++ AA + D A E + A K +C + A Sbjct: 282 ASFQNTKFVLAECATEVEAAQCM-------VDRALELHEAGELSVADAAKVKLFCTEAAG 334 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 VI + ++ GG GYI E IAR Y ++ + I G+ M Sbjct: 335 RVIDKCLQLHGGYGYITEFPIARLYADTRVSRIYGGTSEVM 375 >gi|126732493|ref|ZP_01748292.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37] gi|126707132|gb|EBA06199.1| glutaryl-CoA dehydrogenase [Sagittula stellata E-37] Length = 410 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 32/257 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A + ++ K ++G Y L+G K W +SP++D F++ A Sbjct: 141 PKLATGEWIGCFGLTEPDAGSDPAGMKTRAVK-TEGGYRLNGSKMWISNSPIADVFVVWA 199 Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + E G++ F +LE G+ GL +++NK+ R++ T E+ N LL Sbjct: 200 KSEAHDGKIRGF----VLEKGA-KGLTAPKIENKLSLRASVTGEVVLDNVEVGEDALLPH 254 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356 + GP L+ A +S + AEA +A R + D+P+ + Sbjct: 255 VQGLKGP------FGCLNRARYGISWGVLGAAEACWHAARAYGLDRKQFDKPIAGTQLFQ 308 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD+ +IA R+ DEA+ E M I K C A + A Sbjct: 309 KKLADMQTEIAFGLQGCLRVGRLMDEARGAPE-------MISILKRNNCGKALEIARMAR 361 Query: 417 ECIGGSGYIEERSIARH 433 + GG+G E + RH Sbjct: 362 DMHGGNGISAEFQVIRH 378 >gi|111019622|ref|YP_702594.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819152|gb|ABG94436.1| possible butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 383 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 47/313 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T ++W P+I S E ++A GLTE G+D + ++ + D Y Sbjct: 103 TEDQKREWLPRIASGE------------ALAC-FGLTEPDNGSDPGNLKTRAVRSGDD-Y 148 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 ++G K F+++ + ++ A+ G V FLVP G + + K+G Sbjct: 149 VINGSKIFITNGTWAKLCLVFARTGGSGPKGVSAFLVPT-----DTPGFESREIHGKLGL 203 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334 R AT EL F++ LLG S G + I ++ LD +SV V + + Sbjct: 204 RGQATAELSFTDVRVPASCLLG----SEG--QGFSIAMHSLDKGRVSVGAGCVGIIQGCL 257 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 A+ Y+R R L +++ IAD+++D A L++R A+ + + A+ Sbjct: 258 EAAVDYSRERTQFNRPLASFQLVQDLIADMSVDADAGRLLTWRAADLIERGEPFGTAASK 317 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A KY+C + A A++ GG GY++E +A++ R++ ++ G+ L Sbjct: 318 A-------KYFCSEAAVRAANNAIQIFGGYGYVDEYPVAKYLRDARVMTLYEGTSQIQKL 370 Query: 453 DVLNLLEKGTNLF 465 ++ E G + F Sbjct: 371 -LIGRAETGVSAF 382 >gi|47228564|emb|CAG05384.1| unnamed protein product [Tetraodon nigroviridis] Length = 399 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 37/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 138 FALSEPGNGSDAGAASTTAFQEGDE-WVLNGTKAWITNSWDASAAVVFATTDKKLKHKAG 196 Query: 253 VGCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + FLVP P+ GL + ++K+G ++++T + + ++LG Sbjct: 197 ISAFLVPM------PHPGLSLGKKEDKLGIKASSTANIILEDCRIPLSYMLGPRGAG--- 247 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 KI + LDS + ++ + +A+A + YA++R+ G + ++ +AD+ Sbjct: 248 ---FKIAMQTLDSGRLGIASQALGIAQASLDCAVDYAQKRNAFGAPISKLQAIQFKLADM 304 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + + +A L+++ A D K ++EAA A++ A +C +A++ +GG Sbjct: 305 TVALESARLLTWKAAILRDSKKPFTKEAAMAKLAASEAATYCSH-------QAIQILGGM 357 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY+ + RHYR++ I G+ L + N + K Sbjct: 358 GYVSDMPAERHYRDARITEIYEGTSEIQRLVIANQVLK 395 >gi|311897526|dbj|BAJ29934.1| hypothetical protein KSE_41480 [Kitasatospora setae KM-6054] Length = 609 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ K DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIEGVKRFITSGEHDMSENIVHLVLARPEGGKPGT 223 Query: 253 --VGCFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 +G ++VP+ + E G NG+ +++K+G +++ T E+ F G+LLG+ Sbjct: 224 KGLGLYIVPKYDFDWEIGELGERNGVYATNVEHKMGLKASNTCEMTFGAKHPAKGWLLGE 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 G + KI+ + + +++ + A+ YA+ R V G L Sbjct: 284 --TVDGIRQMFKIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGADLAQFMDKTAPR 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEAAYAR----IMAPI 399 P ++R++ AL A+ D+ A+ R E A A ++ PI Sbjct: 341 VTITHHPDVRRSLLTQKAYAEGMRALVLYTASVQDDMLAARLRGEHDAAAERLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + + +A++++ GGSGY++E I ++ R++ +++ G+ Sbjct: 401 VKGYGSERSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT 447 >gi|30023373|ref|NP_835004.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC 14579] gi|29898934|gb|AAP12205.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus ATCC 14579] Length = 381 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLMAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|145222706|ref|YP_001133384.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145215192|gb|ABP44596.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 380 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 47/301 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +T K W P + S E I + +TE G+D+A I + + D Sbjct: 102 LTNDEQKKRWLPGVTSGE-------------TIIAVAMTEPGAGSDLAGIRTSAVRDGDD 148 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 + ++G K F+SS ++ D +++A+ + G F+V R +E G R +K Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERDME-----GFTRGRKLDK 202 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329 +G S T EL F N LLG ++ P E + I AI +++G R Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 E + Y++ R G + + +A++ ++ R + + + E Sbjct: 257 AVFDETLQYSKDRKAFGQSIGSFQHNRFLLAEMETELEVTETYIDRCLQGVVDGELTAVE 316 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A K+W ++A V+ + ++ GG GY+ E +AR Y + +I G+ Sbjct: 317 AAKA-------KWWATEVAKKVVDQCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEI 369 Query: 450 M 450 M Sbjct: 370 M 370 >gi|317122092|ref|YP_004102095.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885] gi|315592072|gb|ADU51368.1| butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885] Length = 396 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 24/273 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + + D Y L+G K F+S+ +++ +++ A + G + Sbjct: 128 LTEPDAGSDAAALKTTAVRDGDH-YVLNGRKTFISNGGVAEIYVVFAVTDPAAGSRGISA 186 Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-L 315 L+E G+P GL + + K+G R+++T ++ L+G + KI L Sbjct: 187 FLVEKGTP-GLSFGKPFKKMGIRASSTTDVILEQVRVPASHLIGREG------QGYKIAL 239 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD+ + + V +A+ A+ YA +R G + ++ +AD+A I AA Sbjct: 240 ATLDNGRVGIGAQAVGIAQAALDRAVAYASQRRQFGRPIGSFQGIQFKLADMATQIEAAR 299 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L +R A +DE+ A+ MA K + ++A V EA++ GG GY+++ + Sbjct: 300 LLVYRAAVLYDESVRTGRRASKEIAMA---KLFASEVAMQVTTEAVQIHGGYGYLQDFEV 356 Query: 431 ARHYRESPANSILLGSGNA--MVLDVLNLLEKG 461 R R++ I G+ MV+ L E G Sbjct: 357 ERLMRDAKITQIYEGTSEVQRMVIARALLAEAG 389 >gi|311695430|gb|ADP98303.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 386 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 30/265 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253 +G++E G+D+A + + +K D Y ++G K W +SP SD +LA Sbjct: 123 IGVSEVGAGSDVAGMKTTARKDGDD-YIINGSKMWITNSPKSDFICLLANTSDDKPHKNK 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 +VP G+ + NK+G RS+ T ++ F + + +G + G Sbjct: 182 SLIIVPT-----KTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIG----AEGTGF 232 Query: 311 DMKILIYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M++L + + I + + + + I Y R R G LID V+ +A++ ++ Sbjct: 233 MMQMLQFQEERIWGAANVIKALENCITKTIEYCRERKTFGQPLIDNQVIHFRLAELQTEV 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A AL+++ E K + A+ A++ A ++ V ++ GG+GY+ Sbjct: 293 EALRALTYQACELHVEGKDVTRLASMAKLKAG-------RLGREVTDSCLQYWGGNGYMW 345 Query: 427 ERSIARHYRESPANSILLGSGNAMV 451 + I+R +R+ SI G+ M+ Sbjct: 346 DNPISRAHRDVRLVSIGGGADEIML 370 >gi|306821449|ref|ZP_07455053.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550524|gb|EFM38511.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 377 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255 GLTE G+D A GQ I+ Y L+G K F++ +P+ D I+ A + G Sbjct: 121 FGLTEPGAGSDAGA----GQTIAIDKGDYYELNGRKCFITNAPICDFAIISAMTDKSKGT 176 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 + + + G + +NK+G R T ++ N LLG + + Sbjct: 177 KGISTFIVESKWEGFSHGAHENKMGIRGTETSDIILENVKVPKENLLGKVG------QGF 230 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR-----AIAD 361 KI++ LD + V+ + +A EAI Y + R + ++P+ K IAD Sbjct: 231 KIMLNTLDYGRIGVAAQALGVAQGALDEAIKYVKER-----VQFNKPLAKFQNTQFTIAD 285 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L + A D + E+A A KY+ ++A V +A++ GG Sbjct: 286 MATKVQAARLLVYDAAEKKDNGQVPGLESAMA-------KYYAAEIANEVAYKALQLHGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G+I++ I R YR++ SI G+ Sbjct: 339 YGFIKDYPIERIYRDARILSIYEGT 363 >gi|302552787|ref|ZP_07305129.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302470405|gb|EFL33498.1| acyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 608 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 132/287 (45%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ L D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399 P ++R++ AL A+ DE + + A ++ PI Sbjct: 341 VTVTHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIQVKESAGEDVSALEALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + +A++++ GGSG+++E I ++ R+S +++ G+ Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447 >gi|126463715|ref|YP_001044829.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105379|gb|ABN78057.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 403 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K ++G Y LSG K W ++P++D F++ A+ E G++ Sbjct: 145 FGLTEPDAGSDPAGMKTVARKTAEG-YVLSGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F +LE G GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +H AR+ R G L + + +A++ DIA Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A A + GG+G EE Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367 Query: 430 IARH 433 + RH Sbjct: 368 VMRH 371 >gi|262197630|ref|YP_003268839.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] gi|262080977|gb|ACY16946.1| acyl-CoA dehydrogenase domain protein [Haliangium ochraceum DSM 14365] Length = 384 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/326 (22%), Positives = 132/326 (40%), Gaps = 64/326 (19%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + + + ++ R PT + LG++E G+D+AAI + ++ D Sbjct: 93 MATPALARYGSEELCERFLRPTISG-----EFVVCLGVSEVGAGSDVAAIRTHARRDGDD 147 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN-------------GL 270 Y + G K W + +D ++LA DG P+ G+ Sbjct: 148 -YLIRGSKMWITNGTQADYMVLLANTG-------------DGEPHRNKSLLCVPMDTPGV 193 Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY---------L 318 R +K+G R + T E+ F + F +G E+ K +Y L Sbjct: 194 QVARKLDKLGMRCSDTAEVVFEDVRIPQRFRIG---------EEGKGFLYQMQQFQEERL 244 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 A + M ++A+ I Y R R V G LID V+ +A++A ++ AL +R Sbjct: 245 WGATAWLVPMDQAIADTIAYTREREVFGKPLIDNQVIHYRLAELATEVEMLRALVYRAVE 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + + + +A + K +++ V ++ GG G++ E I+R YR+ Sbjct: 305 LYIGGEDVTR-------LASMVKLKAGRLSREVADSCLQYYGGMGFMNETPISRLYRDCR 357 Query: 439 ANSILLGSGNAM---VLDVLNLLEKG 461 SI G+ M + + +L +G Sbjct: 358 ITSIGGGADEVMLSIICKTMGILPRG 383 >gi|225374494|ref|ZP_03751715.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM 16841] gi|225213732|gb|EEG96086.1| hypothetical protein ROSEINA2194_00109 [Roseburia inulinivorans DSM 16841] Length = 637 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 29/284 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P K GLTE G+D A T + Y L+G K F+++ +D +++ A Sbjct: 113 PCAKGEKLAAFGLTEPNAGSD-AGGTETTAVLEGDHYLLNGEKIFITNGGEADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS+AT +L F++ + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKLGIRSSATRQLIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV-----MKR 357 + KI + LD + ++ + +A+ A+ YA+ R I D+PV + Sbjct: 229 GQGFKIAMATLDGGRIGIASQALGIAQGAYESAVEYAKDR-----IQFDKPVAFQQGISF 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IAD+A I A L + A +E + EAA A++ + +A V +A++ Sbjct: 284 KIADMATKIRCARFLVYSAAERKEEHEPYGMEAAMAKM-------YASDIALEVCNDAVQ 336 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460 GG+GY++ + R YR++ +I G+ V+ N+L K Sbjct: 337 IYGGAGYLKGTDVERMYRDAKITTIYEGTNEIQRVVIAANILGK 380 >gi|241111860|ref|XP_002399411.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis] gi|215492973|gb|EEC02614.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis] Length = 410 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 34/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A ++ D Y ++G K W S+ +A +++A V+ + Sbjct: 151 LSEPGNGSDAGAASTTAVLEGDH-YRINGTKAWITSAHEGEAAVVMATVDKSKKHKGISA 209 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 FLVP GL + + K+G R+++T L F + + LGD + Sbjct: 210 FLVPM-----PTQGLTLGKKEEKLGIRASSTSYLIFEDCLIPKEYRLGDEGMG------F 258 Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LDS + ++G + + +A + Y+ +R G L ++ +AD+ + + Sbjct: 259 KIAMSVLDSGRIGIAGQALGIGQAALECALEYSGKRQSFGQSLHSFQAIQMKLADMEVRL 318 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D ++EAA A++ A + A V +A++ +GG GY+ Sbjct: 319 QSARLLTWRAAMLKDAGLKFTKEAAMAKLAAS-------EAATYVSHQAIQILGGMGYVT 371 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + RHYR++ I G+ L + N L K Sbjct: 372 DMPAERHYRDARITEIYEGTSEVQRLVIANNLLK 405 >gi|67524609|ref|XP_660366.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4] gi|40744014|gb|EAA63196.1| hypothetical protein AN2762.2 [Aspergillus nidulans FGSC A4] gi|259486321|tpe|CBF84066.1| TPA: glutaryl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_3G06040) [Aspergillus nidulans FGSC A4] Length = 424 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 + K +A GLTE G+D ++ + ++ G+Y LSG K W +SP+SD I+ A Sbjct: 151 LAKGKLAGCFGLTEPNHGSDPGSMETIAREHPTKKGVYLLSGSKTWITNSPISDILIVWA 210 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 +++ G++ F+V R P L LKNK R++ T ++ + + D+ Sbjct: 211 KLQSTGKIRGFVVER--SKCPPGTLETPALKNKSALRASITGMIQLDDCPVPVENMFPDV 268 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 TGP L+SA + ++ G +L + I AR R+ G L +++ Sbjct: 269 EGLTGP------FTCLNSARLGIAFGAMGALEDCIDRARTYALERKQFKGNPLAKYQLIQ 322 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD D T + ++A D K E M + K C A A Sbjct: 323 KKLADAVTDATYGTLAATQVARLKDAGKCTPE-------MISLVKRQNCDRALANSRTLQ 375 Query: 417 ECIGGSGYIEERSIARH 433 E GG+ +E IARH Sbjct: 376 EVFGGNAASDEYHIARH 392 >gi|72384108|ref|YP_293462.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72123451|gb|AAZ65605.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 378 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 39/306 (12%) Query: 154 PSVTSA-----SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 PS+ +A ++ L T +W P+I V LTE G Sbjct: 84 PSIRNALGPIPQLLLLHGTSAQKDEWLPRI--------------AAGVTACFALTEPDAG 129 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +DI A+ + K S + L+G K ++S + D F++ A+ + G V L + Sbjct: 130 SDIGAMRTTAVK-SGNQWVLNGAKTYISNAERGDVFLVFAKTDKNKGRDGVSAFLVEPKT 188 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLN----VSTGPVEDMKILIYLDS 320 G +G +N L F N LLG+ N + + + ++ + Sbjct: 189 AGFSMSAPIRTMGFMTNGVYGLTFDNCKIPADNLLGEENRGFYYAVSGLNEARV----NV 244 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 ++ G +++ A+ Y++ R G L V++ +AD+A++ AA L A Sbjct: 245 GCQALGGSQIAFEHALQYSKDRVTFGQPLSTHQVLQHMLADMAMEQHAARMLLLEAAWGL 304 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 +++YA++ +C ++A + +A++ GG+GYI+ + R YRE Sbjct: 305 QTGVDVRLKSSYAKV-------FCTEVANRIADKALQIFGGAGYIKGMVVERVYRELRVM 357 Query: 441 SILLGS 446 I G+ Sbjct: 358 RIFEGA 363 >gi|24373247|ref|NP_717290.1| acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] gi|24347481|gb|AAN54734.1|AE015614_1 acyl-CoA dehydrogenase family protein [Shewanella oneidensis MR-1] Length = 385 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 16/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ Q + + DG Y +SG K F+S S +++ G+ G + Sbjct: 124 LTEPGAGSDAASL--QTKAVPDGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 182 IAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGE--EGQGFTFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A SV + +L A Y R G L ++ +AD+A ++ AA + R Sbjct: 240 GRINIATCSVGTAQAALERASQYMNERQQFGKPLAAFQALQFKLADMATELVAARQM-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA +F E AY + K + + V A++ GG GYI E + RH+R Sbjct: 299 LA-AFKLDSGDPEGTAYC----AMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFR 353 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 354 DVRVHQILEGTNEIMRL 370 >gi|319790823|ref|YP_004152463.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315593286|gb|ADU34352.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 399 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 115 FGTEAQKQKFLPKLATGEWIGCFGLTEPDHGSDPGSMVTRAKKVPGG-YSLSGAKMWISN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ Sbjct: 174 SPIADVFVVWAKEVSESGTVGPIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDGV 232 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F + ++ GP L+SA +S + AE A Y R G Sbjct: 233 FCPEENVFPEVQGLKGP------FTCLNSARYGISWGAIGAAEDCWHRARQYTLDRKQFG 286 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +I S RL DE + E + I K C Sbjct: 287 RPLAANQLIQKKLADMQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCG 339 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 KALDIARLARDMMGGNGISDEFGVARH 366 >gi|237801818|ref|ZP_04590279.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024677|gb|EGI04733.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 393 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGSAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|169634201|ref|YP_001707937.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|169152993|emb|CAP02047.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii] Length = 406 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 33/270 (12%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 SP++D F++ A+ EG VG C + LE G GL + K+G R++ T E+ Sbjct: 181 SPIADVFVVWAKEVSAEGNVGDICGFI---LEKGW-EGLSAPAIHGKVGLRASITGEIVM 236 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRH 343 N F ++ GP L+SA ++ + AE A Y R Sbjct: 237 DNVFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRK 290 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G L ++++ +AD+ +IA + R DE + E + + K Sbjct: 291 QFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRN 343 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433 C A + A + +GG+G +E +ARH Sbjct: 344 NCGKALDIARMARDMMGGNGISDEFGVARH 373 >gi|32141216|ref|NP_733617.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|256786699|ref|ZP_05525130.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289770594|ref|ZP_06529972.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|24427171|emb|CAD55332.1| putative acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|289700793|gb|EFD68222.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 608 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 135/287 (47%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + +DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKAAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-------SEEAAYARIMAPI 399 P ++R++ AL A+ DE + + S E A ++ P+ Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDEIQVKEANGEDASAEHALNDLLLPV 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + A +A++++ GGSG+++E I ++ R++ +++ G+ Sbjct: 401 VKGYGSEKAYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447 >gi|319949060|ref|ZP_08023156.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] gi|319437279|gb|EFV92303.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] Length = 605 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 41/308 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI-- 244 PM + + L+E G+++A IT++ + DG Y L G K ++S M++ + Sbjct: 153 PMIQGRYTGTMCLSEPHAGSNLADITTRAEPQPDGTYRLFGQKMWISGGEHQMAENIVHL 212 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA+V G + F+VP+ L D G N + L +K+G R Sbjct: 213 VLAKVPGSPAGTRGISLFIVPKFLVDDDGSIGERNDIVITGLNHKMGFRGTVNTMPTLGQ 272 Query: 294 ----------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR- 342 G+L+G+ N + M L + + + +++ YAR R Sbjct: 273 GIHTPGGRPGAVGYLVGEENTGLKKMFTMMNEARLGVGLGATAIGYTGYLKSLDYARNRP 332 Query: 343 --HVSGG-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 +G +L ++R + + A AL A D+ K+ S E + A Sbjct: 333 QGRPAGADPSTPQVMLTRHTDVRRMLLAQKSYVEGALALCLFCARLVDDEKTGSPEESTA 392 Query: 394 -----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K W + A++ +GG+GY + + +HYR++ N I G+ Sbjct: 393 AKTLLDVLTPIAKSWPSQWCLKANELAVQVLGGAGYTIDYDVEQHYRDNRLNPIHEGTHG 452 Query: 449 AMVLDVLN 456 D+L Sbjct: 453 VQGQDLLG 460 >gi|154495110|ref|ZP_02034115.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC 43184] gi|154085660|gb|EDN84705.1| hypothetical protein PARMER_04157 [Parabacteroides merdae ATCC 43184] Length = 568 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRQGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKERKQFGKAIIEFPAVYDMLSIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + ++ GGSG++ E + R YR++ SI G+ + + + G+ L Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGSYL 457 >gi|218130260|ref|ZP_03459064.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697] gi|317473749|ref|ZP_07933030.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217987544|gb|EEC53872.1| hypothetical protein BACEGG_01848 [Bacteroides eggerthii DSM 20697] gi|316910006|gb|EFV31679.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 568 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|183980533|ref|YP_001848824.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M] gi|183173859|gb|ACC38969.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium marinum M] Length = 611 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLI 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHEGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAAHGVDAKLAVKINDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 LLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|302187073|ref|ZP_07263746.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae 642] Length = 393 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWV-GLSAPAIHGKVGLRASITGEIVMDNVFVPEDNIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|299535046|ref|ZP_07048372.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus fusiformis ZC1] gi|298729542|gb|EFI70091.1| Acyl-CoA dehydrogenase, short-chain specific [Lysinibacillus fusiformis ZC1] Length = 380 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 25/258 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 P+ K GLTE G+D + I DG Y ++G K ++++ I++ Sbjct: 113 PLAKGETLGSFGLTEPNAGSDAGGTRTTA--IIDGDDYIINGEKCWITNAGYARQIIVTA 170 Query: 249 VEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 V G+ G ++ ++ + G+ +K+G R + T E+ N LLGD Sbjct: 171 VTGKREDGKKIISSIIVPTNTPGVTINCNYDKMGVRGSNTCEIVLENVRVPRTNLLGDEK 230 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 + L LD +S++ + V +A+A + +A+ R G + ++ Sbjct: 231 RGFS-----QFLNTLDGGRISIAALSVGIAQAAYEKALKFAKEREQFGAPISKLQAIQFK 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A++I A L + A D+ K +EAA A++ A + C +A++ Sbjct: 286 LADMAMEIELARTLVHKAAWLKDQKKPFGKEAAMAKLFASEMGFRTCN-------QAIQI 338 Query: 419 IGGSGYIEERSIARHYRE 436 GGSGY++E + RH R+ Sbjct: 339 HGGSGYMKEYDVERHLRD 356 >gi|295697788|ref|YP_003591026.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295413390|gb|ADG07882.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 380 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 50/280 (17%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + + GLTE GTD A + + + D Y L+G K F+++ +D +++ A Sbjct: 113 PLAEGTKIGAYGLTEPGAGTDAANLRTTAVREGDH-YVLNGSKIFITNGGEADIYVVFAT 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---------- 293 + + F+ LE G P G + + + K+G RS+ T+EL F N Sbjct: 172 TDREKRHRGISAFI----LEKGMP-GFHFGKKEKKMGLRSSPTMELVFDNCIVPAENRLG 226 Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 FGF + ++ LD ++ V +A+ A+ +A+ R G Sbjct: 227 EEGFGFKIA--------------MMTLDGGRNGIAAQAVGIAQGALEAAVAHAKEREQFG 272 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + ++ +AD+A + AA L+++ A D + +A A++ A T + Sbjct: 273 KSIGQFQAIQFKLADMATRVEAARLLTYQAAWLEDRGLPYGKASAMAKMYASDTAMY--- 329 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V EA++ GG GYI E + R R++ I G+ Sbjct: 330 ----VTTEAVQIFGGYGYIREYPVERFMRDAKITQIYEGT 365 >gi|255994680|ref|ZP_05427815.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989] gi|255993393|gb|EEU03482.1| butyryl-CoA dehydrogenase [Eubacterium saphenum ATCC 49989] Length = 380 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE GTD A ++ ++ D + L+G K F+++ +D F+++A + G + Sbjct: 123 FGLTEPNAGTDAAGQQTRAEQDGD-FWVLNGAKVFITNGGYADVFVVMAMTDKSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVED 311 + + G + ++K+G +++T EL F N G L V+ ++ Sbjct: 182 TAFIVEKGDEGFSIGKTEDKMGICASSTTELIFQNCKIPKDRMLGGLGKGFKVAMSTLDG 241 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I I + ++ + V+ + Y + R G L ++ +AD+A I AA Sbjct: 242 GRIGIASQALGIAQGALDVT----VEYMKSRKQFGKKLSQMQALQFEVADLATRIEAARL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ A+ + S+++A A++ A T A V + ++ GG GY ++ + Sbjct: 298 LVYQAADMKERGLPYSKQSAMAKLFAAET-------AMHVTTKCVQLHGGYGYTKDYPVE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKITEIYEGT 365 >gi|253700014|ref|YP_003021203.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21] gi|251774864|gb|ACT17445.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21] Length = 385 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 49/293 (16%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K + P+I S EY A LTE G+D A +T+ D + L+G Sbjct: 108 KKKYIPRICSGEYP------------AGAFALTETGAGSDPAGMTTSALAEGDE-WVLNG 154 Query: 231 HKWFLSS-PMSDAFIMLA-----QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 K F++S P + F++ A +G+ + CFLV E G+P GL + + K G + Sbjct: 155 SKIFITSAPYAGVFVVWAVTDKDAAKGKGISCFLV----EQGAP-GLVIGKQEEKTGQHA 209 Query: 284 NATVELEFSNTF---GFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-- 334 +AT E+ F N L+G LN ++ G + +I I G+ V LA Sbjct: 210 SATCEVIFDNCRIPKDALMGKLNDGFRIAVGELAGGRIGI-------GSLGLGVGLAAMD 262 Query: 335 -AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 A YA R G + ++ +A+ ++ AA L + A D KS ++EA+ A Sbjct: 263 FATRYASERVQFGQKITGFQAIQWMVAEAYTELEAARLLLMQAAYRKDAGKSFAKEASMA 322 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ A C A++ +GG GY + + R+ R++ +I G+ Sbjct: 323 KMYATEAANRACY-------SAVQMLGGYGYTRDFPVERYARDARITAIYEGT 368 >gi|187918808|ref|YP_001887839.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187717246|gb|ACD18469.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 398 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 30/272 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A+ + ++ D Y L G K F++ +P++D F ++A+ E G Sbjct: 122 FALTEPDAGSDATALRTTARRDGDH-YILDGSKCFITNAPIADLFTVMARTELAKPGAGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + FLV R G+P GL +K+G + ++ F L+G G Sbjct: 181 ISAFLVER----GTP-GLSTSAPYDKMGQAGSPVGDVVFEGCRVPAANLIGGKE-GMGFR 234 Query: 310 EDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L I+L +A+ + MR+ L EA+ Y RR G + + +++ IA+ + Sbjct: 235 TAMKVLNKQRIHL-AALCTGPAMRM-LEEAVAYTSRREQFGKPVAEFQLVQALIAECQTE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA ++ A D + + EA+ + K + +M V A++ +GG GY+ Sbjct: 293 IYAARSMILETARKRDAGEDVALEAS-------MCKMFASEMCGRVADRAVQMLGGRGYL 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNL 457 ++ R YR+ A I G+ L++ + Sbjct: 346 AGNAVERFYRDVRAFRIYEGTTQIHQLNIAKI 377 >gi|296167526|ref|ZP_06849878.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897148|gb|EFG76757.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 611 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHDVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 G+++ +E ++++ +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADMTQMTDK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 + P ++R++ AL A D A + + A + Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATYQDAAVAEAVHGVDAELAVKVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|148685766|gb|EDL17713.1| acyl-Coenzyme A dehydrogenase, short/branched chain, isoform CRA_a [Mus musculus] Length = 480 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 31/275 (11%) Query: 178 IFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-W 233 +F + KA V LG L+E G+D A+ ++ K S Y L+G K W Sbjct: 164 LFRKHASEEQKATYLPKLVTEKLGSFCLSEAGAGSDSFAMKTRADK-SGNYYVLNGSKMW 222 Query: 234 FLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 + ++ F++ A V+ G CFLV R E G + +NK+G R+++T + Sbjct: 223 ISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTE-----GFQIGKRENKMGIRASSTCQ 277 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRR 342 L F N + + N+ K I L+ + ++ + LA+ I Y + R Sbjct: 278 LTFENV---KVPETNILGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 334 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + D ++ +A +A + A L++ A + + +EA+ A KY Sbjct: 335 MQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIKEASMA-------KY 387 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + ++A ++ +E +GG GY ++ + + +R++ Sbjct: 388 YASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDA 422 >gi|15828376|ref|NP_302639.1| acyl-CoA dehydrogenase [Mycobacterium leprae TN] gi|221230853|ref|YP_002504269.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923] gi|3063885|emb|CAA18570.1| putative acyl-coA dehydrogenase [Mycobacterium leprae] gi|13093806|emb|CAC32094.1| acyl-CoA dehydrogenase [Mycobacterium leprae] gi|219933960|emb|CAR72662.1| acyl-CoA dehydrogenase [Mycobacterium leprae Br4923] Length = 611 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ D + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVHQEDDSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSFGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 GD++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GDVHDGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAVHGVDAKLAVKINDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPLVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|23098319|ref|NP_691785.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22776545|dbj|BAC12820.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 398 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 29/270 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+AA+ S K D Y L+G K W ++D FI+ A Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAALQSTAVKQGDH-YILNGQKTWISLCDIADHFIVFAY 171 Query: 249 VEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + R + F+V R E G + +K K G RS T E+ F + + Sbjct: 172 TKDRSEKHKGISAFIVERSWE-----GFSSKAIKGKHGIRSGNTGEIFFDH---IKVPKE 223 Query: 303 NVSTGPVEDMKILIY-LDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMK 356 N+ E KI + LD+ +V+ V + ++ Y R G + +++ Sbjct: 224 NLLGKEGEGFKIAMSALDNGRFTVAAGAVGQIMACIEASVKYCHERETFGKEIGKHQLVQ 283 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + IA + + L +R ++ K + E + A K+ C A +A+ Sbjct: 284 QMIAKMEAGYQMSKLLVYRAGELKNQGKRNTRETSLA-------KWQACDFANKAADDAV 336 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + G GY +E + R R S A I G+ Sbjct: 337 QIHGAYGYSDEYPVERFLRNSKAPVIYEGT 366 >gi|329955335|ref|ZP_08296243.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056] gi|328525738|gb|EGF52762.1| acyl-CoA dehydrogenase protein [Bacteroides clarus YIT 12056] Length = 568 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDADLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVNVRRIENKLGIHGSPTCELVYKNAKCELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|331698556|ref|YP_004334795.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326953245|gb|AEA26942.1| Isovaleryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 379 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 24/270 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC- 255 + +TE G+D+A I S + DG + L G K F+++ ++D ++ A+ GR G Sbjct: 123 IAVTEPDTGSDVARIRSTARPADDG-WVLDGRKMFITNAGIADVLVVAARTGEPGRRGVT 181 Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F VP G+P GL + R K+G S+ T E+ ++G ++ + + Sbjct: 182 LFEVPA----GTP-GLSFSRPLPKMGWHSSDTREVVLDGVRVPSDAVVGAVDRGFYQIME 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + A M + + L A+ Y R R G L ++ +A + +++ AA Sbjct: 237 GFQLERIALAAMGLGHAQECLDLALGYTREREAFGAPLTHLQTIRHRLALMEIELDAARL 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ + A D + + AR KY A ++ +A++ GG+G++EE +A Sbjct: 297 VTHQAAARLDSGHPEAGRS-VAR-----AKYLAAVAANRIVDDAVQLFGGAGFVEESPVA 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 RHYR+ A + +G G + L +L +G Sbjct: 351 RHYRD--ARILRIGGGTDEIQ--LEILTRG 376 >gi|228993442|ref|ZP_04153352.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus pseudomycoides DSM 12442] gi|228766264|gb|EEM14908.1| Acyl-CoA dehydrogenase, long-chain specific [Bacillus pseudomycoides DSM 12442] Length = 257 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 46/283 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-----GC 255 +TE G+D+A+I + +K D Y ++G K F+++ + +D I++ + + + G Sbjct: 1 MTEPGAGSDLASIRTTARKEGD-YYVVNGEKTFITNGIHADLVIVVCKTDTNIKPAHKGM 59 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMK 313 L+ +LE G ++LK KIG S T EL F D+ V + E+ K Sbjct: 60 SLL--VLERGMEGFKRGKKLK-KIGLHSQDTAELIFE--------DVKVPASNLLGEEGK 108 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 YL + + V++A H++ + ++ ++I+D + Sbjct: 109 GFYYLMEKLQQ-ERLIVAIAAKTAAEVMLHITKNYVQERKAFGKSISDF-------QTVQ 160 Query: 374 FRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 FRLA + E A + E ++ + K+W +A V AE ++ GG Sbjct: 161 FRLAEMYTEIEIGRTFVDDCIANHMNGENIVTKV--SMAKWWLTDLAKKVSAECVQLHGG 218 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 GY+EE IAR YR+ P ++I G+ M N++ KG L Sbjct: 219 YGYMEEYEIARRYRDIPVSAIYAGANEIM----KNIIAKGMGL 257 >gi|33592543|ref|NP_880187.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33596196|ref|NP_883839.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33601607|ref|NP_889167.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33572189|emb|CAE41735.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33573199|emb|CAE36854.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis] gi|33576044|emb|CAE33123.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|332381961|gb|AEE66808.1| acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 384 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 46/319 (14%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 MV P V + W P + S E + LTE G+D ++ ++ ++ Sbjct: 96 MVGQWARPAVREQWGPLLASGEKLAS-------------YCLTEPNAGSDAGSLATRAER 142 Query: 221 ISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRL 275 D Y L+G K F+S +D +++A+ G V F VP G+ Y R Sbjct: 143 QGDD-YVLNGAKAFISGGGDTDLLVVMARTGGDGPGGVSAFAVP-----ADAAGIAYGRK 196 Query: 276 KNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS 331 + K+G S +T + F +LG+ P E KI + LD +++ V Sbjct: 197 EEKMGWNSQSTRPITFEQVRVPASHMLGE------PGEGFKIAMKGLDGGRINIGTCSVG 250 Query: 332 LAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSR 386 A+ A RR++ ++ + ++ +AD+A + AA + RLA +A S Sbjct: 251 AAQGAMDAARRYMDERRQFNRKLAQFQALQFKLADMATHLVAARQM-VRLAACKLDAGS- 308 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A A + K + M + +A + GG GY+ + + R R++ + IL G+ Sbjct: 309 ----ADASTYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDTRVHQILEGT 364 Query: 447 GNAM-VLDVLNLLEKGTNL 464 M V+ LLEKG ++ Sbjct: 365 NEIMRVIVARQLLEKGADI 383 >gi|116049479|ref|YP_791718.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|296390097|ref|ZP_06879572.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|115584700|gb|ABJ10715.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 382 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 + L +TE GG+D+A + ++ + D Y +SG K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL + G R K+G ++ T EL F + L+G N + Sbjct: 184 ISLLLVEKGTAGFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+M+ +++L E++ +AR R G + V++ +A++A + + ++ Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A KS +E + A K + +A + +A++ +GG GY+ E + R Y Sbjct: 304 RQAAKMAAGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356 Query: 435 RESPANSILLGSGNAM 450 R++ SI GS M Sbjct: 357 RDNRILSIGGGSREIM 372 >gi|332187101|ref|ZP_08388841.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp. S17] gi|332012801|gb|EGI54866.1| acyl-CoA dehydrogenase, N-terminal domain protein [Sphingomonas sp. S17] Length = 388 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 146/310 (47%), Gaps = 28/310 (9%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + +L + H + R P KA P + +G L ++E Sbjct: 73 HVVAIEEVSRASASLGLSYGAHSNLCVNQIRRWGSPEQKAKYLPGLISGEHVGSLAMSEV 132 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLE 263 G+D+ ++ + ++ G + L+G K W ++P +D ++ A+ EG G + L Sbjct: 133 SAGSDVVSMKLRATQVEGG-WRLNGTKFWITNAPYADTLVVYAKTGEGSRG---ITAFLI 188 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-MKILIY-LDSA 321 D G + +K+G R + T EL F++ F + D V GPV + +L+ LD Sbjct: 189 DKDMAGFSIGQKIDKMGMRGSPTAELVFNDCF---VADEQV-MGPVNGGVGVLMSGLDYE 244 Query: 322 IMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++G+++ + +A + Y R R G + + +++ IAD+ + + +A A + + Sbjct: 245 RAVLAGIQLGIMQACLDVVVPYVRERRQFGRAIGEFQLIQAKIADMYVALNSARAYVYAV 304 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A S D ++ +AA A ++A + A V EA++ +GG+GY ++ + R R+ Sbjct: 305 ARSCDAGRTTRFDAAGAILLA-------SENAVKVSLEAIQALGGAGYTKDWPVERFARD 357 Query: 437 SPANSILLGS 446 + I G+ Sbjct: 358 AKLLDIGAGT 367 >gi|332716278|ref|YP_004443744.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325062963|gb|ADY66653.1| isovaleryl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 417 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 23/285 (8%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 ++H+ W + R Y P + S+A ++E G+D+ ++ + + D +Y L Sbjct: 132 QIHR-WGTEEQKRRYLPKLVSGEHVGSLA----MSETEAGSDVVSMRLKADRKGD-VYVL 185 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +G K W + +D ++ A+ + G + L + S G + +K+G R + T Sbjct: 186 NGTKMWITNGHEADTLVVYAKTDMSAGARGITAFLIEKSFKGFRPAQKLDKLGMRGSPTS 245 Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341 ELEF+ +LG LN G M L Y + A+++ V M+ ++ + YAR Sbjct: 246 ELEFTECEVPEENILGRLN--DGVTVLMSGLDY-ERAVLAAGPVGIMQAAIDLVLPYARE 302 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +++ +ADI + A+ A + +A + D + ++AA A + A Sbjct: 303 RKQFGKPIGEFQLVQGKLADIYSAMNASRAYVYAVARACDNGRITRQDAAGAILFA---- 358 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++ +GGSGY+ E R R++ I G+ Sbjct: 359 ---AERATRVALDAIQLLGGSGYVNESPAGRLLRDAKLYEIGAGT 400 >gi|30262357|ref|NP_844734.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47527647|ref|YP_018996.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185200|ref|YP_028452.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|65319648|ref|ZP_00392607.1| COG1960: Acyl-CoA dehydrogenases [Bacillus anthracis str. A2012] gi|165870535|ref|ZP_02215189.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167633117|ref|ZP_02391443.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|167639599|ref|ZP_02397869.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|170687028|ref|ZP_02878247.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|170706639|ref|ZP_02897098.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|177649348|ref|ZP_02932350.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190565496|ref|ZP_03018416.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|227814837|ref|YP_002814846.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|229602743|ref|YP_002866690.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] gi|254684931|ref|ZP_05148791.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CNEVA-9066] gi|254737378|ref|ZP_05195082.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Western North America USA6153] gi|254743437|ref|ZP_05201122.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Kruger B] gi|254751693|ref|ZP_05203730.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Vollum] gi|254760212|ref|ZP_05212236.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Australia 94] gi|30256988|gb|AAP26220.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Ames] gi|47502795|gb|AAT31471.1| acyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179127|gb|AAT54503.1| acyl-CoA dehydrogenase [Bacillus anthracis str. Sterne] gi|164713690|gb|EDR19213.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0488] gi|167512308|gb|EDR87684.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0193] gi|167531929|gb|EDR94594.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0442] gi|170128370|gb|EDS97238.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0389] gi|170669079|gb|EDT19823.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0465] gi|172084422|gb|EDT69480.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0174] gi|190563523|gb|EDV17488.1| acyl-CoA dehydrogenase [Bacillus anthracis Tsiankovskii-I] gi|227005385|gb|ACP15128.1| acyl-CoA dehydrogenase [Bacillus anthracis str. CDC 684] gi|229267151|gb|ACQ48788.1| acyl-CoA dehydrogenase [Bacillus anthracis str. A0248] Length = 569 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 38/309 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PKI S E+ IG LTE G+D + + DG Sbjct: 126 TKEQKEKYLPKIASGEW--------------IGAYALTEPNAGSDALSAKTSAVLNEDGT 171 Query: 226 -YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K W ++ M+D +++ A+ + F+V R E G GL + K I S Sbjct: 172 AWKLNGEKQWITNAHMADVYVVFAKTNKGMTAFIVERTCE-GVSIGL--EEKKMGIKGSS 228 Query: 284 NATVELE-----FSNTFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 AT+ LE N G V G + IL + L A ++ + ++ ++ Sbjct: 229 TATLILEDVVIPAENVLG------EVGKGHHVALNILNFARLKLAFGNIGTAKQAIGLSV 282 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-- 394 Y + R L+D +++ IA++ + A + ++R A DEA S+E + Sbjct: 283 QYGKERKQFQTELVDFTMIQEKIANMIIATYGAESAAYRTAGVIDEAIHESDEDLMKKMS 342 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I + K + ++ EA++ GG GY++E + YR++ + I G+ Sbjct: 343 QFAIECALNKVNASETLGHIVDEAVQIHGGYGYMQEYEVELLYRDARISRIFEGTNEINR 402 Query: 452 LDVLNLLEK 460 L V +L K Sbjct: 403 LTVAKMLMK 411 >gi|296536689|ref|ZP_06898753.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957] gi|296262980|gb|EFH09541.1| glutaryl-CoA dehydrogenase [Roseomonas cervicalis ATCC 49957] Length = 397 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 19/279 (6%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 MQK + GLTE G+D A++ ++ +K+ DG Y +SG K W +SP++D F++ A+ Sbjct: 132 MQKGELVGCFGLTEPDAGSDPASMRTRAKKV-DGGYLVSGSKTWITNSPIADVFVVWAKD 190 Query: 250 E-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--T 306 E G V +++ + ++ GL +++ K R++ T + F L+V Sbjct: 191 EAGDVRGYVLEKGMK-----GLSAPKIEGKFSLRASITGMIMMEEVFVPEENKLDVKGLK 245 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 GP + Y A ++ A Y R + G L + ++++ +AD+ +I Sbjct: 246 GPFSCLNRARY-GIAWGALGAAEFCWHAARTYTLERKMFGRPLANTQLIQKKLADMQTEI 304 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 RL FDE + E M + K C A + + + GG+G + Sbjct: 305 TLGLQSVLRLGRLFDEHRVTPE-------MISLCKRNSCGKALDIARMSRDMHGGNGIAD 357 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 E + RH A + G+ + L +L + G + F Sbjct: 358 EYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLSAF 395 >gi|118472185|ref|YP_885879.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium smegmatis str. MC2 155] gi|118173472|gb|ABK74368.1| acyl-CoA dehydrogenase family protein member 8 [Mycobacterium smegmatis str. MC2 155] Length = 395 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 48/308 (15%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A MV T K W P++ S E LTE G+D AA+ ++ Sbjct: 95 AWMVDTYGTEDQRKTWVPRLASME-------------TIASYCLTEPGAGSDAAALRTRA 141 Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D Y L G K F+S + SD ++++A+ G + ++E +P GL + + Sbjct: 142 VKDGDH-YVLDGVKQFISGAGTSDLYVVMARTGGEGPRGISTFIVEKDTP-GLSFGADEQ 199 Query: 278 KIGNRSNATVELEF-----------SNT----FGFLLGDLNVSTGPVEDMKILIYLDSAI 322 K+G + T ++ F NT FG + LN ++ A Sbjct: 200 KMGWNAQPTAQVIFEGVRVPAEALLGNTEGTGFGIAMNGLNGGR-----------INIAA 248 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 S+ G + + +A+ Y R G L+D+P ++ +AD+A + + L +R A++ D Sbjct: 249 CSLGGAQAAYDKAVGYLADRQAFGAALLDEPTIRFTLADMATGLETSRNLLWRAASALDA 308 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + + K + V A++ GG GY+ E + + R+ + I Sbjct: 309 NHPDKV------TLCAMAKRYVTDTCFDVADSALQLHGGYGYLREYGLEKIVRDLRVHRI 362 Query: 443 LLGSGNAM 450 L G+ M Sbjct: 363 LEGTNEIM 370 >gi|66048238|ref|YP_238079.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas syringae pv. syringae B728a] gi|289677381|ref|ZP_06498271.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5] gi|63258945|gb|AAY40041.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Pseudomonas syringae pv. syringae B728a] gi|330937471|gb|EGH41436.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976260|gb|EGH76322.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 393 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARLARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|51892709|ref|YP_075400.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium thermophilum IAM 14863] gi|51856398|dbj|BAD40556.1| acyl-CoA dehydrogenase, short-chain specific [Symbiobacterium thermophilum IAM 14863] Length = 381 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVG- 254 GLTE G+D AA + + DG + L+G K F+++ +I+ V +G G Sbjct: 125 FGLTEPGAGSDAAATKTTAVRDGDG-WVLNGSKVFITNANYCGYIVCTAVTRPGQGHRGI 183 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP + +P G K+G RS+ T L F N L D + + Sbjct: 184 SAFIVP----NPTP-GFTIGPAYEKMGLRSSDTRPLFFDNVR--LPADALLGREGEGFRQ 236 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD +S+ M V +A+ A+ YA++R G + ++ +AD+A++I Sbjct: 237 FMATLDGGRISIGAMAVGIAQGALDAALAYAKQRVQFGQSISKFQAIQFKLADMAMEIEL 296 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + + A D+ + + EAA A++ A T +A++ GG+GY+E+ Sbjct: 297 ARNMVLKAAWLKDQGRPFTREAAMAKLFASETAVRAAN-------QAIQIHGGAGYMEDL 349 Query: 429 SIARHYRESPANSILLGS 446 ++R +R++ I G+ Sbjct: 350 PVSRFWRDAKLTEIGEGT 367 >gi|313897821|ref|ZP_07831362.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2] gi|312957356|gb|EFR38983.1| butyryl-CoA dehydrogenase [Clostridium sp. HGF2] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ +D +++ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVKDGDDYILNGTKIFITNAGEADVYVIFAMTDKTKGTHG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 + ++E G P G + + K+G R +AT EL F+N + LLG + K Sbjct: 181 ISAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNVRLSKDHLLGQEG------KGFK 233 Query: 314 ILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIAD 361 I A+M++ G R+ +A E + Y + R G + + +AD Sbjct: 234 I------AMMTLDGGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A ++ S EAA A++ A ++A V +A++ +GG Sbjct: 288 MQVKTDAARWLVYDAAMKKEKGLPYSVEAAKAKLFA-------AEVAMEVTTKAIQLMGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY + + R +R++ I G+ Sbjct: 341 YGYTRDYPVERMFRDAKITEIYEGT 365 >gi|294782903|ref|ZP_06748229.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA] gi|294481544|gb|EFG29319.1| butyryl-CoA dehydrogenase [Fusobacterium sp. 1_1_41FAA] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 39/292 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+++ + +++ A + G + ++E G+P G + + K+G R +AT EL Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVESGTP-GFSIGKKEMKLGIRGSATCEL 214 Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334 F N LLGD + KI A+M++ G R+ +A E Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDE 262 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI+YA+ R G L + IA++ + + AA L ++ A S +AA A+ Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A T A V +A++ GG GY E + R R++ I G+ Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|163734480|ref|ZP_02141920.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149] gi|161392488|gb|EDQ16817.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149] Length = 369 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 45/322 (13%) Query: 160 SMVALMTT------PRVHKD-WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 +V L+TT + +D W P I + KT VA +TE GTD++ Sbjct: 74 GLVELITTLLVAHGTQAQRDMWLPDILA-----------AKTKVA--YCITEPEAGTDVS 120 Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL 270 I + + DG+ + L+G K W ++P++D +LA+ + G + D +G+ Sbjct: 121 GIRTTA--VRDGVGWRLNGGKIWIHNAPVADLGFVLARTDPEAGHRGMSIFAVDLHADGV 178 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 ++K+G R++ L F + LLG + G M ++ LD + ++ Sbjct: 179 ARGPKEHKMGQRASPVGPLHFDDVKLPAHALLG----AEGRGFHM-MMSVLDKGRVGIAA 233 Query: 328 MRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + V + +A + YA +R + + ++ +ADIA D+ AA L+ A+ D Sbjct: 234 LAVGIGQAGLDAAVEYAAQRRQFDKAISEFQGVQWLLADIAKDVEAARLLAHSAAHKIDI 293 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ + A+ A MA A A+A++ GGSGYI+ + R YR++ I Sbjct: 294 GADATKACSMAKCFA-------GDMAVARSADALQVFGGSGYIKGFEVERLYRDAKITQI 346 Query: 443 LLGSGNAMVLDVL-NLLEKGTN 463 G+ + + LL KG + Sbjct: 347 YEGTNQIQRMIIARELLAKGAD 368 >gi|119714318|ref|YP_921283.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119534979|gb|ABL79596.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 387 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 26/264 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGR--- 252 LTE G+D +A+ ++ +K+ G Y L+G K F+S +D I+ A + GR Sbjct: 121 FALTEPGAGSDNSAMRTRAEKVEGG-YVLNGAKHFISHGNADFAIVFAVTGPPLRGRTPQ 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 V FLV R G+P G + + +G EL F N F + D V P E + Sbjct: 180 VTAFLVDR----GTP-GFTVGKAQRMMGWSGMEECELVFENCF---VPDDQVLGTPGEAL 231 Query: 313 KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + L A V M L +I Y R R V L D+ ++ +A+ A++ Sbjct: 232 RLGLASVAQRRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEP 291 Query: 367 AAATALSFRLANSFDEAKSRSE-EAAYARIMA---PITKYWCCKMAPAVIAEAMECIGGS 422 A +++ A DEA++ E +R+ A I K + V A++ GG Sbjct: 292 YLAREATYKAARLCDEARAAGRSEIELSRLFAREISIAKLHATRALNRVADVAVQVHGGM 351 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G+ E + R YR++ I+ G+ Sbjct: 352 GWCREYPVERLYRDARVFRIIEGA 375 >gi|239501349|ref|ZP_04660659.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB900] Length = 403 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLSGAKMWITN 177 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370 >gi|254428436|ref|ZP_05042143.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196194605|gb|EDX89564.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 387 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P + +++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMGLRADKQGDH-YVLNGNKMWITNGPDAHTYVIYAKTDTSAGPRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + NV E +K+L+ Sbjct: 187 TAFIVERGFAGFSQAQKLDKLGMRGSNTCELVFEDCH---VPEENVLGTVGEGVKVLMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG M+ + + Y R G + + +M+ IAD+ + + A+ + Sbjct: 244 LDYERTVLSGGATGIMQACMDVVVPYVHERKQFGKAIGEFQLMQGKIADMYVMLNASRSY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + +C + A + EA++ +GG+GYI E R Sbjct: 304 LYNVAKACDRGETNRKDAAGVIL-------YCAENATKMALEAIQTLGGNGYINEYPTGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|148652811|ref|YP_001279904.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571895|gb|ABQ93954.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 601 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 67/357 (18%) Query: 148 AGHLMS--------PSVTSASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 AG+ M+ P +T+A++ LM V + + P++ S ++ T Sbjct: 114 AGYFMAANPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFTGT----------- 162 Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR 252 + LTE G+ +A I + DG Y + G K ++S + ++LA+V G Sbjct: 163 --MALTEPHAGSSLADIRTTATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGG 220 Query: 253 ------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 + F VP RL G P N + L +K+G R + L F + G+L Sbjct: 221 PAGVKGISLFAVPKYRLDASGKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYL 280 Query: 299 LGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILID 351 +G+++ + M +I + +A++ G + SLA YA+ R V+ + D Sbjct: 281 IGEVHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLA----YAKDRLQGRVAPHLKPD 336 Query: 352 QP--------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 P + ++A ++ + + + N+ D+ + + ++ Sbjct: 337 DPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLT 396 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 P+ K W + P ++ +GG+GY E + +R++ N I G+ LD+ Sbjct: 397 PVLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDL 453 >gi|300711832|ref|YP_003737646.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] gi|299125515|gb|ADJ15854.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 126/262 (48%), Gaps = 36/262 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 ++E G+++A + ++ ++ D + + G+K W + ++D +++A+ + G Sbjct: 124 ISEPAHGSNVAGMETRAERDGDE-WVIDGNKMWITNGTVADVAVVMAKTDPDAGKRGITA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED 311 FLVP E G +++ NK+G R++ EL LL D++V G V + Sbjct: 183 FLVPTDTE-----GFRAEKIDNKLGIRASDLAEL--------LLDDVHVPEENVIGEVNE 229 Query: 312 --MKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +++ + S +SV+ V L A+ YA R + + ++ +A++A Sbjct: 230 GFYQLMNFFGSGRVSVAAQAVGAAQGALDAALEYAGEREQFDRKIAEFQAIEHKLAEMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA +L++R A+ + R+ A A + K + + A V E+++ GG+GY Sbjct: 290 NVEAARSLTYRAASEVTDGDQRT-----AMKFASMAKLFASEHAVDVADESIQVHGGAGY 344 Query: 425 IEERSIARHYRESPANSILLGS 446 + + + R+YR++ I G+ Sbjct: 345 VTDHAAERYYRDARITKIYEGT 366 >gi|302541026|ref|ZP_07293368.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302458644|gb|EFL21737.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 390 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR----VGCFL 257 L+E G+D AA+T++ + D G W ++D + +LA+ + FL Sbjct: 133 LSEPSSGSDAAALTTRATREGDTWTLEGGKAWITHGGIADFYTVLARTGPERTRGISAFL 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + T ++ + D + I L Sbjct: 193 VP-----GDAPGLSAAAPERKMGMNGSPTAQIHLDRV---RVPDTRRIGEEGQGFAIALS 244 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + LA EA+ Y +R G + D ++ +AD+A I A A Sbjct: 245 ALDAGRLGIAACAIGLAQAALDEALAYTAQRRQFGRPIADFQGLRFMLADMATQIEAGRA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S++AA A K +C A V +A++ GG GY + + Sbjct: 305 LYLAAARLRDAGRPFSKQAAMA-------KLFCTDTAMRVTTDAVQLFGGYGYTADFPVE 357 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 358 RYMREAKVLQIVEGT 372 >gi|240172395|ref|ZP_04751054.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 460 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 56/329 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P WAP+ F D ++ ++AI +E GG+D+ + ++ + Sbjct: 96 SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTRAR 145 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + +++ ++ A V+ +G F+VP G+P GL Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEDLGHRGQALFVVP----GGTP-GLELV 199 Query: 274 RLKNKIGNRSNATVELEF-------SNTFG--------------FLLGDLNVST---GPV 309 R +K+G R++ T EL F +N G + G S+ G Sbjct: 200 RKLDKLGCRASHTAELRFNGARVPGANLLGGQEKLEHKLAKARELVAGGKRSSSATLGTF 259 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E + ++ A ++ R +L A YA R GG +ID + +AD+A I AA Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATSYATEREAFGGPIIDNQGIAFPLADLATQIDAA 315 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R S+ A S + R ++K ++A A++ +GG GYI + Sbjct: 316 RLLTWR--ASWMAANGVS----FERGEGSMSKLAASEIAVKATERAIQTMGGWGYITDHP 369 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + + YR++ +I G+ + + N L Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVISNAL 398 >gi|229087835|ref|ZP_04219949.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] gi|228695471|gb|EEL48342.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-44] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ +D +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAIK-KDDHYVINGSKVFITNGGEADTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V PVE++ Sbjct: 188 FIVEKDTPGLIVGKDEHKMGLLGSRTVQLTFE--------DMKV---PVENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +LA A+ YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAKAALACAVDYAKERQQFGKPIAAQQGLGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVDVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKICEIYEGT 369 >gi|226361798|ref|YP_002779576.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240283|dbj|BAH50631.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 383 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 47/313 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T +W P+I S E ++A GLTE G+D + ++ + D Y Sbjct: 103 TEEQKHEWLPRIASGE------------ALAC-FGLTEPDNGSDPGNLKTKAVRSGD-EY 148 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 ++G K F+++ + ++ A+ G V FLVP G + + K+G Sbjct: 149 VINGSKIFITNGTWAKLCLVFARTGGPGPKGVSAFLVPT-----DTPGFESREIHGKLGL 203 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334 R AT EL F++ LLG S G + I ++ LD +SV V + + Sbjct: 204 RGQATAELSFTDVRVPASCLLG----SEG--QGFSIAMHSLDKGRVSVGAGCVGIIQGCL 257 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 A+ YAR R L +++ IAD+++D A L++R A+ + + A+ Sbjct: 258 EAAVDYARERTQFDRPLASFQLVQDLIADMSVDTDAGRLLTWRAADLIERGEPFGTAASK 317 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A KY+C + A A++ GG GY++E +A++ R++ ++ G+ L Sbjct: 318 A-------KYFCSEAAVRAANNAIQLFGGYGYVDEYPVAKYMRDARVMTLYEGTSQIQKL 370 Query: 453 DVLNLLEKGTNLF 465 ++ E G + F Sbjct: 371 -LIGRAETGISAF 382 >gi|217968860|ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gi|217506187|gb|ACK53198.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 395 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 26/264 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ DG + LSG K W + Sbjct: 116 FGTEAQKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMITRARKV-DGGFSLSGSKMWITN 174 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG++ F +LE G GL + K+G R++ T E+ F Sbjct: 175 SPIADVFVVWAKDDEGQIRGF----ILEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229 Query: 296 GFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGIL 349 + + N V +K L+SA ++ + AEA + Y R+ G L Sbjct: 230 ---VPEENAFP-TVRGLKGPFTCLNSARFGIAWGALGAAEACYETARQYTMDRNQFGRPL 285 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++++ +AD+ +I R+ DE + E + I K C A Sbjct: 286 AANQLIQKKLADMLTEITLGLQAVLRVGRMKDEGIAPVE-------ITSIIKRNSCGKAL 338 Query: 410 AVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 DIARMARDMLGGNGISDEYPVARH 362 >gi|326317408|ref|YP_004235080.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374244|gb|ADX46513.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 388 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 30/263 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254 LTE G+D A++ ++ ++ D Y ++G K F+S S D +++A+ G + Sbjct: 124 LTEPGAGSDAASLKTRAERSGDA-YVINGSKAFISGAGSTDVLVLMARTGAPDSGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTG 307 F VP G+ Y + + K+G S T + F N LLG ++ Sbjct: 183 AFAVP-----ADAAGIHYGKKEEKMGWNSQPTRTISFDNVHVPANHLLGAEGEGFKIAMK 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A SV + +L A Y + R G + ++ +AD+A ++ Sbjct: 238 GLDGGRINI----ATCSVGAAQGALNAAQQYMQDRRQFGKAIASFQALQFKLADMATELV 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA S +A +R A + K + V+ EA++ GG GYI E Sbjct: 294 AARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFDVVNEALQLHGGYGYIRE 347 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + R R++ + IL G+ M Sbjct: 348 YPLERLLRDARVHQILEGTNEIM 370 >gi|24213260|ref|NP_710741.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|45658836|ref|YP_002922.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193991|gb|AAN47759.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|45602081|gb|AAS71559.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 557 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 30/278 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------- 250 G+ +TE G+D+A ++ K ++G + ++G K W + ++ ++L + E Sbjct: 278 GIMVTEPNYGSDVAGVSVTA-KPANGGWVINGVKTWCTFAGYANLLLILCRTESDPSLKH 336 Query: 251 -------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLL 299 F G + IG R + E+ F N F L Sbjct: 337 KGLSILLAEKPTFTGHEFTYTQPEGGKIEGKAIGTIGYRGMHSFEVSFDNYFVPAENLLG 396 Query: 300 GDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 G+ G M+ + +A + M+ +L A+ YAR R V + + + K Sbjct: 397 GEAGRGKGFYFQMEGFAGGRIQTAARAHGVMQAALEAALRYARERAVFQKPIYEYNLTKY 456 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA +A+ + A+ + +AN D K + E A + K++ K+A V EAM+ Sbjct: 457 KIARMAVILQASRQYANHVANLLDNHKGQME--------ATLIKFYASKVAEWVTREAMQ 508 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG GY EE +++R++ ++ SI G+ M L V+ Sbjct: 509 IHGGMGYAEEYAVSRYFVDARVFSIFEGAEEVMALRVI 546 >gi|50084768|ref|YP_046278.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49530744|emb|CAG68456.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 375 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 34/287 (11%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K + E P+ + + LTE G+D AAI ++ K D + ++G K F++ Sbjct: 98 KFGTEEQKQKYLVPLAQGEMIGAFALTEPHTGSDAAAIKTRAIKQGDE-WIINGAKQFIT 156 Query: 237 SPMSDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQ--RLKNKIGNRSNATVE 288 S + I++ V G+ G F+VPR L Y+ R + K+G ++ T + Sbjct: 157 SGHNAGVIIVFAVTDPNAGKKGLSAFIVPR-------ETLGYEVIRTEEKLGLHASDTCQ 209 Query: 289 LEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 + ++ +LG L ++ +E +I I A +V R +L EA YA+ Sbjct: 210 IALTDVRVHHSLMLGQEGEGLKIALSNLEGGRIGI----AAQAVGLARAALEEATKYAKE 265 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + + +A +A +I AA L A + K EA+ A++ Sbjct: 266 RVTFGKPIFEHQALAFRLASMATEIEAARQLVHYAARLKEAGKPCLNEASMAKL------ 319 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +M V + A++ GG GY+++ I R YR++ I G+ + Sbjct: 320 -FSSEMVERVCSAALQIFGGYGYLKDFPIERIYRDARICQIYEGTSD 365 >gi|152995599|ref|YP_001340434.1| acyl-CoA dehydrogenase domain-containing protein [Marinomonas sp. MWYL1] gi|150836523|gb|ABR70499.1| acyl-CoA dehydrogenase domain protein [Marinomonas sp. MWYL1] Length = 601 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 70/397 (17%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M + L T + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTIELHGTDEQKQTYLTKLVSGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLKTKAEPQADGSYAITGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ DGS N + +++K+G NAT + F GFL+G+ N + Sbjct: 233 PKHNVDGSGEIADRNQVSCGSIEHKMGIHGNATCVMNFDGAKGFLIGEPNRGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQPVMKRAIAD 361 L +A+ ++ +L ++ YA+ R +SG +I P ++R + Sbjct: 293 NTARLGTALQGLAHAEWALQNSVAYAKDRLQMRSLSGPKAPEKAADPIIVHPDVRRMLLT 352 Query: 362 IALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 AL + D A ++E ++ PI K + + + Sbjct: 353 QKAFAEGGRALIHYCSMLVDIMKKGTADEKAEADELMSLLTPIAKAFLTETGFESANHGL 412 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLFEQLFSTLE 473 + GG G+I E + ++ R+ + + G+ LD+L L+ +G L Sbjct: 413 QVFGGHGFIAEWGMEQNVRDCRISMLYEGTTGIQALDLLGRKVLMTQGATL--------- 463 Query: 474 QDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIAL 510 ++ I+ CKE KG R + AL Sbjct: 464 -------RRFTKIIH---KFCKEHKGDKRLKSYITAL 490 >gi|121596063|ref|YP_987959.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120608143|gb|ABM43883.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 95/400 (23%), Positives = 160/400 (40%), Gaps = 63/400 (15%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 QE+ R A + Q + P RWDK P R H GL ++ V + Sbjct: 7 QEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAAL---GAYGICVPE 55 Query: 131 QAHKIRAARLYLMAQLE------AGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFSR 181 + L L LE G + SVT+ + A++ + +DW Sbjct: 56 ELGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL------ 109 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 P+ + + LTE G+D +A+ + K + Y ++G K F++S + Sbjct: 110 -------TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKNG 161 Query: 242 AFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---- 291 ++ V G+ G FLVP + G RL++K+G S+ T ++ F Sbjct: 162 HVAIVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDHCR 216 Query: 292 ---SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 N G ++ G +E +I I S M+ S +LA Y++ R G Sbjct: 217 IPAENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFDAALA----YSKERESFGQP 272 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 + + + +AD A I AA L + A D + +EAA A++ A +MA Sbjct: 273 IFNHQAVGFRLADCATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMA 325 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 V + A++ +GG G + + + R YR+ I G+ + Sbjct: 326 ERVCSAAIQTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365 >gi|84623559|ref|YP_450931.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367499|dbj|BAE68657.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 597 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 55/339 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ D G N L +++K+G +++ T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVDRDGNVGERNALHCGAIEHKMGIKASVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------- 348 P + ++ + +++A +SV + L+E A+ Y R R S + Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRALSGAKFPGKPA 338 Query: 349 --LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPIT 400 +I P ++R + I + LS A+ D A + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLSLHAASLVDVAHRGESDQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL--- 457 K + + A++C GG GYI E + + R++ +I + LD++ Sbjct: 399 KACQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYECTTGIQALDLIGRKTA 458 Query: 458 --LEKGTNLFEQLFSTL--EQDLGSSGKKVITILRDSIS 492 G LF T QD ++ + I LRD S Sbjct: 459 TSQAAGLKLFLTDVDTFANAQDGNAALAEFIKPLRDKCS 497 >gi|90424584|ref|YP_532954.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90106598|gb|ABD88635.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 382 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S + ++ G G + L Sbjct: 125 LTEPGSGSDAAALRTRAVRDGDH-YVLNGQKQFISGASAAGLYVVMVRTGGEGAGGISTL 183 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPV 309 + +G GL + + K+G + T + F N GF + + G + Sbjct: 184 VVEGDTPGLSFGANERKMGWNAQPTCAVMFDNARVPAANRLGEEGIGFKIAMAGLDGGRI 243 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + A S+ G + +L +++ Y ++R G L + ++ +AD+A ++ AA Sbjct: 244 ---------NIAACSLGGAQSALDKSLSYMKQRKAFGKRLDEFQALQFRLADMATELEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R A + D A ++ + K + + V +A++ GG GY+ E Sbjct: 295 RTLVWRAAAALDRKDHD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYG 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 I + R+ + IL G+ M L V L Sbjct: 349 IEKIVRDLRVHQILEGTNEIMRLIVARKL 377 >gi|269125478|ref|YP_003298848.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310436|gb|ACY96810.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 599 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 106/467 (22%), Positives = 192/467 (41%), Gaps = 70/467 (14%) Query: 136 RAARLYLMAQLEAGHL-------MSPSVTSASMVALMTTPRVHKDWAPKI------FSRE 182 RA R++ A L AG L P+V S +++A V P + E Sbjct: 81 RALRVFAEAGLLAGELDESLGGMQLPTVVSKAVLAWFQAANVGTAAYPFLTIANANLLVE 140 Query: 183 YDPTNKAPMQKTSVAIG--LG---LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 Y + +A G LG L+E + G+ +A I ++ + DG Y L G K ++S+ Sbjct: 141 YGTPEQVDTWVRPMAAGRFLGTMCLSEPQAGSSLADIATRAEPQPDGTYRLYGTKMWISA 200 Query: 238 PMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGN 281 + ++LA++ G + F+VP++L + G N + L +K+G Sbjct: 201 GEHELSENIVHLVLAKIPGGPPGVKGISLFIVPKVLVNADGSLGERNDIALVGLNHKMGY 260 Query: 282 RSNATVELEFS----------NTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSG 327 R L F G+L+G+ L+ + + +I + L +A + +G Sbjct: 261 RGTVNTVLNFGEGAHTPGGAPGAVGYLVGEPHKGLSYMFHMMNEARIGVGLGAAALGYTG 320 Query: 328 M-------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 +V L A+ + LI+ ++R + + A AL + Sbjct: 321 YLHSLEYAKVRLQGRPPAAKDPALPPVPLIEHADVRRMLLAQKAYVEGALALGLYCSLLV 380 Query: 381 DEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 D++K+ + A R ++ PI K W + + A++ GG GY E ++ + Y Sbjct: 381 DDSKTAEDAVARDRAALLLDVLTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFY 440 Query: 435 RESPANSILLGSGNAMVLDVLN---LLEKGTN---LFEQLFSTLE--QDLGSSGKKVITI 486 R++ N I G+ LD+L +++ G L E + +T++ DLG ++ Sbjct: 441 RDNRLNPIHEGTHGIQGLDLLGRKVVMKNGMGLRVLGETISATVQCAIDLGGETAEMGRA 500 Query: 487 LRDSIS-LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFLEN 532 L+D+ L L + LA+S+ L AG +A ++LE Sbjct: 501 LQDAFERLTLVTAQLWSAGDPAVTLANSSIYLEAAGHIVVAWIWLEQ 547 >gi|160901416|ref|YP_001566998.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160367000|gb|ABX38613.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 32/274 (11%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIML 246 AP+ + + LTE G+D +A+ T+ + SD Y ++G K F++S + D I++ Sbjct: 110 APLARGEMLGAFCLTEPHVGSDASALRTTATRDGSD--YVINGVKQFITSGKNGDVAIVI 167 Query: 247 AQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294 A + G F+VP S G RL++K+G S+ T +++F +N Sbjct: 168 AVTDKAAGKRGMSAFIVPT-----SAPGYQVLRLEDKLGQHSSDTAQIQFEGCRIPAANL 222 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 G ++ +E +I I A SV R + A+ Y++ R G + + Sbjct: 223 IGAEGEGYRIALSALEGGRIGI----AAQSVGMARAAFDCALQYSKERESFGQPIFNHQA 278 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD A I AA L + A+ D +EAA A++ A +MA V + Sbjct: 279 VGFRLADCATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSA 331 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A++ +GG G + + + R YR+ I G+ + Sbjct: 332 AIQTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|111018872|ref|YP_701844.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110818402|gb|ABG93686.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 30/275 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247 P T +G +G+TE G+D+ AI + + D Y ++G K F+++ S I+LA Sbjct: 115 PSMATGEILGAIGMTEPGAGSDLKAIKTTAIRDGDE-YVVNGSKTFITNGASADMIVLAV 173 Query: 248 QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + + + G V L+ D P G R+ +K+G T EL F++ LLG+ Sbjct: 174 KTDPKAGAKGVALLIVDLRDCP-GFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGEE 232 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G + + L + M ++ + + Y R R G L + + Sbjct: 233 GQGFGQLMAQLVQERLIIGAQASGAMTRAVEDTVAYTRSRQAFGHSLFE-------FQNT 285 Query: 363 ALDIAAATALSFRLANSFD---EAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEA 415 A ++A ++ A D EA R E EAA + KYW + AVI Sbjct: 286 AFELAECQTIARTCAVFLDHCIEAHLRGELDPSEAA-------MVKYWLTEQQCAVIDRC 338 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 339 VQLHGGYGYMREYLIARMYEDARVQKIYAGANEVM 373 >gi|15596732|ref|NP_250226.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107100966|ref|ZP_01364884.1| hypothetical protein PaerPA_01001996 [Pseudomonas aeruginosa PACS2] gi|218892509|ref|YP_002441376.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254234637|ref|ZP_04927960.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719] gi|254239883|ref|ZP_04933205.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192] gi|9947494|gb|AAG04924.1|AE004582_2 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126166568|gb|EAZ52079.1| hypothetical protein PACG_00503 [Pseudomonas aeruginosa C3719] gi|126193261|gb|EAZ57324.1| hypothetical protein PA2G_00512 [Pseudomonas aeruginosa 2192] gi|218772735|emb|CAW28520.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 382 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 + L +TE GG+D+A + ++ + D Y +SG K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL + G R K+G ++ T EL F + L+G N + Sbjct: 184 ISLLLVEKGTAGFSVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+M+ +++L E++ +AR R G + V++ +A++A + + ++ Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A KS +E + A K + +A + +A++ +GG GY+ E + R Y Sbjct: 304 RQAAKMAAGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356 Query: 435 RESPANSILLGSGNAM 450 R++ SI GS M Sbjct: 357 RDNRILSIGGGSREIM 372 >gi|311068395|ref|YP_003973318.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus 1942] gi|310868912|gb|ADP32387.1| acyl-CoA dehydrogenase, short-chain specific [Bacillus atrophaeus 1942] Length = 380 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 124/266 (46%), Gaps = 25/266 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 GLTE G+D ++ ++ D Y ++G K ++++ +++ V G+ +G + Sbjct: 123 FGLTEPNAGSDAGGTQTKAERKGDE-YVINGEKCWITNANYARTVIVTAVTGKNELGKNI 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + L+ GL +K+G R + T E+ N LLGD + + Sbjct: 182 ISALIVPTDTAGLTITNPYDKMGVRGSDTAEILLENVRVPAENLLGDSSKGF-----KQF 236 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LD +S++ + V +A+ ++ YA+ R G + ++ +AD+A++I A Sbjct: 237 LHTLDGGRISIAALAVGIAQGALDASLSYAKERKQFGQSISSFQAIQFKLADMAMEIDLA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + A D + ++E+A+A++ A +MA +A++ GGSGY+ E Sbjct: 297 RQMVIKAAWLKDRQRPFTKESAFAKLFA-------SEMATRACNQAIQIHGGSGYMREYG 349 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + R R+ A + +G G + + ++ Sbjct: 350 VERMLRD--AKLMEIGEGTSEIQRIV 373 >gi|302535475|ref|ZP_07287817.1| acyl-CoA dehydrogenase [Streptomyces sp. C] gi|302444370|gb|EFL16186.1| acyl-CoA dehydrogenase [Streptomyces sp. C] Length = 608 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 85/360 (23%), Positives = 159/360 (44%), Gaps = 65/360 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMEENILHYVLARPEGHGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKFHFDWETGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILID------- 351 + + M ++I ++ +++ + A+ YA+ R V G L + Sbjct: 284 KHDG---IRQMFMIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLANFMDKTAP 339 Query: 352 ------QPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI-----MAP 398 P ++R++ AL A+ DE K + E A A I + P Sbjct: 340 KVTITHHPDVRRSLMTQKAYAEGMRALVLYTASVQDEIAVKQAAGEDASAEIGLNDLLLP 399 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 I K + + + +A++++ GGSGY++E I ++ R++ +++ G+ A+ Sbjct: 400 IVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT-TAI-------- 450 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI-SLCKEDKGLARFLTEKIALASSAAAL 517 +G + F F + +D G+S + IL ++I E G + ALA +A L Sbjct: 451 -QGQDFF---FRKIVRDQGAS----LNILSETIKKFLAEGPGGEDLAPARDALAKAAVDL 502 >gi|225182055|ref|ZP_03735486.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167268|gb|EEG76088.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 378 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + G GLTE GTD A + + K+ Y L+G K F+++ D F++ A Sbjct: 113 PLAQGKALGGYGLTEPSAGTDAAGLRTTA-KLDGDHYILNGTKIFITNGDGDTFVVFAAT 171 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + G + + + G + K+G R+++T EL F + + N+ Sbjct: 172 DKSKGPKGISAFIVEKGFEGFKVGSHEKKLGIRASSTTELIFEDC---KVPKENLLGKEG 228 Query: 310 EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 E KI + LD ++ + LA+ A+ Y++ R G + + + +AD+A Sbjct: 229 EGFKIAMSTLDGGRNGIAAQALGLAQGAFEAALEYSKGREQFGQPIFNFQAISFMLADMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A+ L+++ A E + +A A++ + A + A++ GG G Sbjct: 289 TKIEASRLLTYQAAYLEGEGLPYGKASAMAKL-------YASDAAMEITTNAVQIFGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + R R++ I G+ Sbjct: 342 YSREYPVERMMRDAKITQIYEGT 364 >gi|222112221|ref|YP_002554485.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221731665|gb|ACM34485.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 95/401 (23%), Positives = 160/401 (39%), Gaps = 65/401 (16%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLH-------CSIWDRS 123 QE+ R A + Q + P RWDK P R H GL C D Sbjct: 7 QEMIRDAVRDFAQQELW-PNAARWDKEHHFP-------REAHQGLAALGAYGICVPEDLG 58 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT---TPRVHKDWAPKIFS 180 + + A L +A + G + SVT+ + A++ + +DW Sbjct: 59 GAGL----DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQQRDWL----- 109 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 P+ + + LTE G+D +A+ + K + Y ++G K F++S + Sbjct: 110 --------TPLARGEMLGAFCLTEPHVGSDASALRTTAVKEGNE-YVINGVKQFITSGKN 160 Query: 241 DAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF--- 291 ++ V G+ G FLVP + G RL++K+G S+ T ++ F Sbjct: 161 GHVAIVIAVTDKGAGKKGMSAFLVPT-----NTPGYVVARLEDKLGQHSSDTAQINFDHC 215 Query: 292 ----SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 N G ++ G +E +I I S M+ S +LA Y++ R G Sbjct: 216 RIPAENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFDAALA----YSKERESFGQ 271 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + + + +AD A I AA L + A D + +EAA A++ A +M Sbjct: 272 PIFNHQAVGFRLADCATQIEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EM 324 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A V + A++ +GG G + + + R YR+ I G+ + Sbjct: 325 AERVCSAAIQTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365 >gi|170727539|ref|YP_001761565.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812886|gb|ACA87470.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC 51908] Length = 385 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G G + + Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGATELLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 +G+ Y + ++K+G + T E+ F+ LLG+ G MK L Sbjct: 183 AVPADADGITYGKAEDKMGWNAQPTREITFTEVRVPVANLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A S+ + +L A Y R G + ++ +AD+A ++ AA L RL Sbjct: 241 RINIATCSIGTAQAALERATQYMTERKQFGKPIAAFQALQFKLADMATELVAARQL-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F + E AY + K + + V A++ GG GYI E + RH R+ Sbjct: 300 A-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHVRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|167647119|ref|YP_001684782.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167349549|gb|ABZ72284.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 388 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 37/288 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ + L ++E G+D+ ++ + + + D Y Sbjct: 115 TPEQKQRYLPKLISGEHVGS-------------LAMSEAGSGSDVVSMKLKAELVGD-RY 160 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++P +D ++ A+ E R+ FL+ + ++ G + +K G R + Sbjct: 161 ALNGTKFWITNAPHADTLVVYAKTDERRITAFLIEKGMK-----GFSVSKKLDKFGMRGS 215 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHY 338 T EL F + + + NV + +L+ + A++S M+ L + Y Sbjct: 216 DTAELVFEDC---EVPEENVMGPVGGGVGVLMSGLDYERAVLSAGPLGIMQACLDVVLPY 272 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R R G + +M+ IAD+ + + +A A + +A + D K+ +AA A +MA Sbjct: 273 VRDRKQFGQAIGSFQLMQGKIADMYVALNSARAYVYAVARACDAGKTTRFDAAGAILMA- 331 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 332 ------SENAVRVSLEAIQALGGAGYTKEWPVERLMRDAKLYDIGAGT 373 >gi|118473445|ref|YP_884819.1| acyl-CoA-dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|51507244|gb|AAU04876.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118174732|gb|ABK75628.1| acyl-coA-dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 48/371 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIEGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ D G NG+ +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFHFDHETGEIGERNGVFVTNVEHKMGLKVSATCELSLGQHGIPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + +++ + A+ YA+ R V G Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKER-VQGADMTQMTDKTAPR 342 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA-------PI 399 + P ++R++ A+ A D +++ + A PI Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRAIYLYTATFQDAEVAQAVHGVDGDLAARVNDLLLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NL 457 K + + A A + E+++ +GGSG++++ I ++ R+S +S+ G+ D + Sbjct: 403 VKGFGSETAYAKLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKI 462 Query: 458 LEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASSA 514 + + +EQ + +G + R+ ++ D +G+A LT + A A Sbjct: 463 IRDKGQALAYVAGEIEQFIKNENGNGRLKTERELLATALADVQGMAASLTGYLMAAQEDA 522 Query: 515 AALYRAGMNDI 525 A++Y+ G+ + Sbjct: 523 ASIYKVGLGSV 533 >gi|332878036|ref|ZP_08445766.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683998|gb|EGJ56865.1| acyl-CoA dehydrogenase protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 576 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 33/299 (11%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L G + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVDVRRIENKMGIHGSPTCELVYKNAKAELCGSRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R+E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQ 467 + ++ GGSG++ E + R YR++ SI G+ + + + G + FEQ Sbjct: 407 DGIQVHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGAYIATIRDFEQ 465 >gi|310799839|gb|EFQ34732.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella graminicola M1.001] Length = 446 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 23/281 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K +G Y ++G K W +S +D FI+ A Sbjct: 175 PKLATNTVGSFCLSEPVSGSDAFALATKATKTENG-YKINGSKMWITNSKEADFFIVFAN 233 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301 ++ G + + + + G + + K+G ++++T VE+ N G Sbjct: 234 LDPAKGYKGITAFIVEKNTKGFSIAKKEKKLGIKASSTCVINFDDVEIPRENLLGEEGSG 293 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIA 360 + G + + +I I +++ S A+ Y G L+ + M+ IA Sbjct: 294 YKYAIGLLNEGRIGIAAQMTGLALG----SWENAVKYVWNDRKQFGQLVGEFQGMQHQIA 349 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECI 419 +IAAA AL + A R +EA +M A + K + ++A V A+E + Sbjct: 350 QSYTEIAAARALVYNAA--------RKKEAGDNFVMDAAMAKLYASQVAGRVSGLAIEWM 401 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG G++ + + +R+S +I G+ N + + LL+K Sbjct: 402 GGMGFVRDGPAEKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 442 >gi|225791074|gb|ACO31278.1| PtmO4 [Streptomyces platensis] Length = 388 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 50/274 (18%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L L+E G+D+AA+ + ++ D Y LSG K F+++ + F+++A C P Sbjct: 123 LALSEPDAGSDLAAMRTTARREGDH-YVLSGQKTFITNGILADFVIVA-------CKTDP 174 Query: 260 R---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296 ++E G P G R +K+G ++ T EL F + F Sbjct: 175 DARHKGISLLVVERGMP-GFERGRRLDKVGLKAQDTAELFFHDVRVPAANLLGAEGRGFA 233 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 +++ +L P E + I A+ ++ G + + A+ YA+ R G + + Sbjct: 234 YMMENL-----PTERIAI------AVSALGGAQRAFELALEYAKTRTAFGQPIGTFQANR 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 A+AD+ + AA + E + +AA A KYW + A +I + Sbjct: 283 FALADMRAKLDAARTYVDGCIMALVEGHLTAVDAAAA-------KYWTTETAWQIIDRCV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GYI E IAR +R++ I G+ M Sbjct: 336 QLFGGYGYINEYEIARIWRDNRIERIFGGTSEIM 369 >gi|299768730|ref|YP_003730756.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298698818|gb|ADI89383.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 387 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F + LLG NV + + Sbjct: 185 GISMLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVSVSNLLGKENVGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377 >gi|312111551|ref|YP_003989867.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311216652|gb|ADP75256.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 51/297 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK S E + + +TE G+D+A I++ K D Y ++G Sbjct: 108 RKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGDH-YIVNGQ 153 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRLKNKIG 280 K F+++ + +++A C P ++E +P G R +K+G Sbjct: 154 KTFITNGIHADLVIVA-------CKTDPNAKPPHKGISLLVVERDTP-GFTRGRKLDKVG 205 Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 + T EL F N G ++ ++++ AI + + V Sbjct: 206 LHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIV----AIAAQTAAEVMFE 261 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 Y ++R G + + ++ +A+++ +I + + K+ + A Sbjct: 262 LTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQGKNVVTHVSMA 321 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W +MA + AE+M+ GG GY+EE IAR YR+ P ++I G+ M Sbjct: 322 -------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371 >gi|189462651|ref|ZP_03011436.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136] gi|189430812|gb|EDU99796.1| hypothetical protein BACCOP_03348 [Bacteroides coprocola DSM 17136] Length = 568 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 132/288 (45%), Gaps = 28/288 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L G+ + G ++ ++ Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGERKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + +A I + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEALAYAKDRKQFGKAIIEFPAVYDMLATIKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + ++ GGSG++ E + R YR++ SI G+ + + + G Sbjct: 407 DCIQVHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNG 454 >gi|167580782|ref|ZP_02373656.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH] gi|167618886|ref|ZP_02387517.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis Bt4] Length = 395 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGSKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +++ + +LE G GL + K+G R++ T E+ F +L ++ Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENILPNVKG 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ + R++V G L ++++ + Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C A + A + + Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 349 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 350 GGNGISDEFGVARH 363 >gi|19704118|ref|NP_603680.1| Acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328674|ref|ZP_06871191.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714324|gb|AAL94979.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154273|gb|EFG95074.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 37/291 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ + +++ A + G + + + + G + + K+G R +AT EL Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSATCELI 215 Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------EA 335 F N LLGD + KI A+M++ G R+ +A EA Sbjct: 216 FENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDEA 263 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I+YA+ R G L + IA++ + + AA L ++ A S +AA A++ Sbjct: 264 INYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKL 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A T A V +A++ GG GY E + R R++ I G+ Sbjct: 324 FAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|254295199|ref|YP_003061222.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254043730|gb|ACT60525.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 602 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 L+E + G+ ++ I ++ +G Y + G K ++S +++ + +LA++ G Sbjct: 163 LSEPQAGSSLSDIRTKATPTDEGHYLIEGSKMWISGGDHELAENIVEMVLAKIPGGPPGV 222 Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDL 302 + F+VP R+ +DGS N + L +K+G+R L F + G+L+G Sbjct: 223 RGISLFIVPKYRVNDDGSLGPKNDISLAGLNHKMGHRGTTNCLLNFGENGDCHGYLVGK- 281 Query: 303 NVSTGPVEDMKILIYL----------DSAIMSVSGMRVSLAEAIHYARRRHVSGG----- 347 P E +K + ++ S + +++G SL A ++ RH Sbjct: 282 -----PHEGLKSMFHMMNEARIGVGQGSVMSALTGFLYSLKYAGERSQGRHPQDKDPTKP 336 Query: 348 --ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPI 399 +I+ +KR + + A+AL F + ++ K ++ R I+ P+ Sbjct: 337 QIPIIEHTDIKRLLMAQKAAVEGASALLFYCMDLVEQQKLTDDKNEQMRLALLLEILTPL 396 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 K W + A++ +GG GY E + R+YR++ N I G+ LD+L Sbjct: 397 AKSWPSEFCLEANKHAIQILGGYGYTREFPVERYYRDNRLNHIHEGTHAIHGLDLL 452 >gi|254427189|ref|ZP_05040896.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp. DG881] gi|196193358|gb|EDX88317.1| Acyl-CoA dehydrogenase, middle domain protein [Alcanivorax sp. DG881] Length = 595 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI-- 244 PM + LTE G+ + I ++ DG Y L G+K F+S + ++D + Sbjct: 152 PMMAGRFTGTMALTEPHAGSSLTDIRTRAVPQDDGSYRLKGNKIFISGGENELADNIVHL 211 Query: 245 MLAQVEGR------VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ G + F+VP RL +DG+P N + L +K+G R + L F + Sbjct: 212 VLAKIPGGPEGVKGISLFVVPKYRLDDDGNPDARNDVILAGLIHKLGYRGTTSTALTFGD 271 Query: 294 T---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 G+L+G+ L + + ++ + + ++ G R +L A + RH Sbjct: 272 GDDCHGYLVGEPHQGLRYMFQMMNEARVGVGFGAGLLGYRGYRFALDYARDRVQGRHPDD 331 Query: 347 G-------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----RSEEAAYAR 394 +I+ +KR + AA A+S DE ++ E Sbjct: 332 ADFSKPQVPIIEHADVKRLLLTQKAYAEAAIAMSLYGYRLVDEIQTGEEAAAKEAELLLD 391 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ P+ K W + A++ GG+GY E + + +R++ N I G+ LD+ Sbjct: 392 LLTPVLKTWPSEFGLKANDMAIQVFGGAGYTREYPVEQVWRDNRLNPIHEGTTGVHGLDL 451 Query: 455 L 455 L Sbjct: 452 L 452 >gi|134100528|ref|YP_001106189.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291004993|ref|ZP_06562966.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133913151|emb|CAM03264.1| long-chain-acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 41/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---F 256 + +TE G+D+A +++ ++ G Y L+G K F++ ++ +++ GR G Sbjct: 124 IAMTEPGTGSDLAGMSTTARR-EGGDYVLNGAKTFITGGINADLVLVVARTGRGGDRRDG 182 Query: 257 LVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT--------------FGFLLG 300 L ++E G P ++R +N K+G ++ T EL F++ FG+L G Sbjct: 183 LSLLVVERGMPG---FERGRNLDKLGLKAQDTAELSFTDVRVPAANLLGAEGAAFGYLTG 239 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 +L P E + I + +A + +L + Y R R G + K +A Sbjct: 240 NL-----PQERLSIAVAAQAAAEA------ALETTLEYVRERRAFGTPVSSFQNTKFELA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 A +I A AL D A ++ A + A K +C ++ V+ ++ G Sbjct: 289 ACATEIEAGRAL-------LDRALGEHDDGALSGADAAKVKIFCTELQARVVDRCLQLHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GYI E IAR Y ++ I G+ Sbjct: 342 GYGYIREYRIARLYADARVTRIFGGT 367 >gi|157134292|ref|XP_001663227.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108881392|gb|EAT45617.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 424 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 42/293 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S E+ IG L ++E G+D+ ++ ++ +K D Sbjct: 144 TEEQKQQYLPKLISGEH--------------IGALAMSEAGSGSDVVSMKTKAEKKGD-Y 188 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y L+G K W + P +D +I+ A+ + + F+V R GSP G +K Sbjct: 189 YVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHGISAFIVER----GSP-GFSRGPKLDK 243 Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333 +G R + T EL F + +LG LN G M L Y L A V M+ + Sbjct: 244 LGIRGSGTCELVFEDVKVPAKNMLGQLN--KGVYVLMSGLDYERLVLAAGPVGLMQAACD 301 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 A YA R + + +++ +AD+ + A A + +A S D K+ ++ A Sbjct: 302 VAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRAYLYSVARSCDMGKANPKDCAGV 361 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +C + A V +A++ +GG+GYI + R R++ I G+ Sbjct: 362 IL-------YCAEKATQVALDAIQILGGNGYINDYPTGRIMRDAKLYEIGAGT 407 >gi|34763420|ref|ZP_00144369.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886914|gb|EAA24037.1| Acyl-CoA dehydrogenase, short-chain specific [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 386 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 39/292 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDG 224 T ++ + + PK+ S E+ IG GLTE GTD A + Q G Sbjct: 108 TEKLKQKYLPKLASGEW--------------IGAFGLTEPNAGTDAAGQQTMAVQDPETG 153 Query: 225 IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + L+G K F+++ ++ ++++A + G + + + + G + + K+G R Sbjct: 154 EWILNGSKIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRG 213 Query: 284 NATVELEFSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----E 334 ++T EL F N LLGD + KI ++ LD + ++ + +A E Sbjct: 214 SSTCELIFENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGE 267 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI YA+ R G L + IA++ + + AA L ++ A S +AA A+ Sbjct: 268 AIGYAKERKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 327 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A T A V +A++ GG GY E + R R++ I G+ Sbjct: 328 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 372 >gi|320163645|gb|EFW40544.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 644 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 51/356 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE------- 250 LTE G+D +I S+ + +DG + L+G K W + +++ F + AQ + Sbjct: 209 FALTEPSSGSDANSIRSRAKLSADGKHWVLNGSKIWISNGGIAEIFTVFAQTQVPDRKTG 268 Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300 +V F+V R S GL + +NK+G + + T E+ F N G + Sbjct: 269 ELKDKVTAFIVER-----SFGGLTNGKPENKMGIKCSNTAEVYFDDVKIPVENVLGQVGE 323 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 V+ + + + + A +S + M+ LA++ +A R G + + ++K A Sbjct: 324 GFKVAMAILNNGRFGM---GAALSGT-MKAMLAKSAEHAINRTQFGSKIKEFGMIKEKFA 379 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +AL I A ++++ LA + D + + I A I+K + + A +V EA++ +G Sbjct: 380 QMALKIYATESMAYTLAANMDRGSNDYQ------IEAAISKVFASEAAWSVADEALQVMG 433 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFE---------QLF 469 G G+++ R R+ I G+ M + + + + G +L E F Sbjct: 434 GIGFMKAAGFERVVRDLRIFRIFEGANEILRMFIALTGIQDAGKDLKEVQAALKSPISNF 493 Query: 470 STLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDI 525 L Q+ K+++ + D+I KG+ L L S A + A ++ + Sbjct: 494 GVLSQEATKRIKRIVGVGHDTI------KGVHPLLRGPAGLVESQATAFGAAVDSL 543 >gi|262371049|ref|ZP_06064371.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] gi|262313935|gb|EEY94980.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] Length = 600 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 34/296 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y ++G K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPQADGSYAITGEKIFISAGEHDMAENIVHIVLARLPGAPTGT 225 Query: 253 --VGCFLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L DG+ N + +++K+G N+T + F N GFL+G N Sbjct: 226 KGISLFIVPKFNLNADGTVGERNAVRCGSIEHKMGIHGNSTCVINFDNAKGFLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILIDQP 353 + + +A+ ++ + A+ YA+ R +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGAFQGALTYAKDRLAMRSLTGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRL---ANSFDEAKSRSEEAAYARIMA---PITKYWCCKM 407 ++ + AL + L A+ ++ + E + I++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLSLHADVVEQGATEEERKSSDNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 ++ GG G+I E + + R++ + G+ LD+L GT Sbjct: 406 GSESAKHGVQVFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLLGRKVLGTQ 461 >gi|254303807|ref|ZP_04971165.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323999|gb|EDK89249.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 37/291 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ + +++ A + G + + + + G + + K+G R +AT EL Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSATCELI 215 Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------EA 335 F N LLGD + KI A+M++ G R+ +A EA Sbjct: 216 FENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALDEA 263 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I+YA+ R G L + IA++ + + AA L ++ A S +AA A++ Sbjct: 264 INYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKL 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A T A V +A++ GG GY E + R R++ I G+ Sbjct: 324 FAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|222112226|ref|YP_002554490.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221731670|gb|ACM34490.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 396 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 28/284 (9%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 K + PK+ S E+ +G L ++E G+D+ ++ + + G Y L+ Sbjct: 116 RKKYLPKLISGEH--------------VGALAMSEPGAGSDVISMKLRAED-KGGYYLLN 160 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K W + P +D ++ A+ E +G V L + G + +K+G R + T E Sbjct: 161 GCKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKGMQGFSIAQKLDKLGMRGSHTGE 220 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRR 342 L F N + NV G K+L+ LD ++G M+ + + Y R Sbjct: 221 LVFQNV---EVPAENVLGGVNNGAKVLMSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDR 277 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + +++ +AD+ + A + ++ +A + D S + R Sbjct: 278 KQFGQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDMLGS--DHVRQVRKDCASVIL 335 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 WC + A + E ++ GG+GYI E + R +R++ I G+ Sbjct: 336 WCAEKATWMAGEGVQIYGGNGYINEYPLGRLWRDAKLYEIGAGT 379 >gi|218781613|ref|YP_002432931.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762997|gb|ACL05463.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML------AQVEGR 252 +TE G+D + + + DG Y ++G K F++S + +++ ++ Sbjct: 123 FAMTEPLAGSD--PLRQETTAVQDGDHYIINGVKRFITSGQNAGVVIVTAKTDPSKRHRG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305 + FLV + G+P G RL++K+G R++ T +L F S G G +++ Sbjct: 181 ITAFLVDK----GTP-GFSVGRLEDKMGLRASDTADLYFEDCRVPASQILGGEGGGFSLA 235 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ +I I A S+ + L A+ YA+ R G + + +ADIA + Sbjct: 236 MKALDGGRIGI----AAQSIGVAQACLDAAVKYAKEREQFGKPIGQFQGVSGPLADIATE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA ++ A+ D ++ + EA+ A++ A +M V A+A++ GG GY Sbjct: 292 IHAARLMALDAASRKDRGQNFTMEASMAKLFA-------SEMVNRVTAKALQIHGGYGYT 344 Query: 426 EERSIARHYRESPANSILLGS 446 ++ + R+YR++ +I G+ Sbjct: 345 KDYPVERYYRDARVFTIYEGT 365 >gi|318061797|ref|ZP_07980518.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SA3_actG] gi|318076677|ref|ZP_07984009.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SA3_actF] Length = 606 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/324 (22%), Positives = 128/324 (39%), Gaps = 51/324 (15%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 SRE T PM + + L+E + G+ +A + ++ + DG Y L G+K ++S Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTYRLFGNKMWISGGD 209 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 + ++LA+ G + F+VP+ L D G+ N + L +K+G R Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDDDGGIGARNDVVLAGLNHKMGYRG 269 Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329 L F G+L+G+ N + M +I + L + + +G Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328 Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378 A+ YAR R + P ++R + + A AL+ Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ ++ E AA I+ PI K W + + A++ GG GY E + + Sbjct: 386 LVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 YR++ N I G+ LD+L Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469 >gi|313679641|ref|YP_004057380.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977] gi|313152356|gb|ADR36207.1| butyryl-CoA dehydrogenase [Oceanithermus profundus DSM 14977] Length = 373 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 29/255 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D + S +++ DG Y LSG K W S + ++++A+ + FLVP Sbjct: 124 LTEASAGSDPKGLKSTAERV-DGGYRLSGVKSWITSGGQAQLYVIMARAPEGITAFLVP- 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317 GL + + K+G + T E+ F L E+ K L Y Sbjct: 182 ----AGAEGLSFGEPEEKMGLHAAHTTEVRMDGVFVPDEDRLG------EEGKGLHYALA 231 Query: 318 -LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ V +A A YA R G + + + +A++A I A+ Sbjct: 232 GLDSGRLGIAAQAVGIARAAFEIARDYADEREQFGRRIREFQGVSFKLAEMATAIEASRL 291 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A + EA+ A++MA + A V EA++ +GG+GY + + Sbjct: 292 LVLNGAMKKQAGARFTREASMAKLMA-------SRTAVDVTREAVQILGGNGYAVDYRVE 344 Query: 432 RHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 345 RYYRDAKITEIYEGT 359 >gi|294140054|ref|YP_003556032.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12] gi|293326523|dbj|BAJ01254.1| isovaleryl-CoA dehydrogenase [Shewanella violacea DSS12] Length = 389 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 28/311 (9%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P T +G L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLVTGEHVGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + D Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAQTYVIYAKTDLDKGAHGITAFIVD 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDS 320 G + +K+G R + T EL F + +LG LN +K+L+ LD Sbjct: 195 RDSKGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENILGGLN------NGIKVLMSGLDY 248 Query: 321 AIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + +SG M + I Y R G + +++ +AD+ + AA + + Sbjct: 249 ERVVLSGGPLGIMNACMDIVIPYVHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYN 308 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R Sbjct: 309 VAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLR 361 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 362 DAKLYEIGAGT 372 >gi|329927598|ref|ZP_08281761.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5] gi|328938387|gb|EGG34777.1| acyl-CoA dehydrogenase, organelle type [Paenibacillus sp. HGF5] Length = 596 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 25/264 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + DG Y L+G K ++++ +D FI+ A+++G F+V Sbjct: 152 LTEPTSGSDALGAKTTARLSDDGEYYILNGSKLYITNAGFADIFIVYAKIDGEHFTAFIV 211 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + +E G + K+G + ++T L F + LLG++ ++ + Sbjct: 212 EKEME-----GFTLGPEEKKMGIKGSSTRPLFFEDVKVPKENLLGEIGKGHRIAFNILNI 266 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A +V + S+ + YA R + P+M++ +A + + ++ +R Sbjct: 267 GRYKLAAGTVGAAKESIELSAKYANTRKQFDTPISQFPLMRKKLAKMNITAFVMESMVYR 326 Query: 376 LANSFDEAKS----RSEEAA---------YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A DEA SE+A YA I I K +C + V EA++ GG Sbjct: 327 TAGLLDEAMQDIDYNSEDAGIHSAAAISDYA-IECSINKVFCSEGLDNVADEAVQIHGGY 385 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI+E + R YR+S N I G+ Sbjct: 386 GYIQEYKVERIYRDSRINRIFEGT 409 >gi|229193595|ref|ZP_04320539.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228589900|gb|EEK47775.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + +GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTSGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|330996007|ref|ZP_08319901.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT 11841] gi|329574004|gb|EGG55582.1| acyl-CoA dehydrogenase protein [Paraprevotella xylaniphila YIT 11841] Length = 576 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 33/299 (11%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEENNCWRLNGVKRFITNGDADIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L G + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVDVRRIENKMGIHGSPTCELVYKNAKAELCGSRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L+ EA+ YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEALAYAKDREQFGKAIINFPAVYDMLATMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R+E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIACERKLTPEERAEQKKYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL-----FEQ 467 + ++ GGSG++ E + R YR++ SI G+ + + + G + FEQ Sbjct: 407 DGIQVHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGAYIATIRDFEQ 465 >gi|299768807|ref|YP_003730833.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter sp. DR1] gi|298698895|gb|ADI89460.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter sp. DR1] Length = 593 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 49/372 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNEDGTYNITGTKI 196 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKN 277 F++ +D ++LA+ + F+VP+ L EDGS N + +++ Sbjct: 197 FITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNEDGSLGERNLVGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F G+L+G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDAAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R +G ++P ++R + ++ + A+ A + + D K Sbjct: 317 YATDRLQGRSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKF 376 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A + ++ PI K + A +A GG GYI E + + R+ Sbjct: 377 STDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRI 436 Query: 440 NSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKED 497 I G+ D++ K F + T +D + + ++D ++ E Sbjct: 437 AQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFANDLDTDLNFIKDATLDAATEI 496 Query: 498 KGLARFLTEKIA 509 + + +F+ E+ A Sbjct: 497 EAITQFIIEQAA 508 >gi|121636157|ref|YP_976380.1| putative acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988630|ref|YP_002643317.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|121491804|emb|CAL70266.1| Probable acyl-CoA dehydrogenase fadE5 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771743|dbj|BAH24549.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + + VP+ L E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVRVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|77459092|ref|YP_348598.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77383095|gb|ABA74608.1| butyryl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 375 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLASGEMLGAFALTEPQAGSDASSLKTRARLEGDH-YVLNGCKQFITSGQNAGIVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 G+ G F+VP SP G R+++K+G ++ T ++ F +N G Sbjct: 170 TDPSAGKRGISAFIVP----TDSP-GYKVARVEDKLGQHASDTCQILFEDVKVPVANRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E ++ I A SV R + A YAR R G +I+ + Sbjct: 225 EEGEGYKIALANLEGGRVGI----ASQSVGMARAAFEAARDYARERDTFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A D + A + A + K + +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHYAAALRDSGQP-------ALVEASMAKLFASEMAEKVCSMAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+ + + R YR+ I G+ + Sbjct: 334 QTLGGYGYLNDFPLERIYRDVRVCQIYEGTSD 365 >gi|31791422|ref|NP_853915.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium bovis AF2122/97] gi|31617007|emb|CAD93114.1| PROBABLE ACYL-COA DEHYDROGENASE FADE5 [Mycobacterium bovis AF2122/97] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + + VP+ L E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVRVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|256396543|ref|YP_003118107.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362769|gb|ACU76266.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 388 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 +TE G+D +T+ +K+ DG + + G KWF++ +D I+LA G P Sbjct: 123 VTEPNAGSDPQNLTTTARKVDDG-WSIDGEKWFVTVGDHADFIIVLAAA----GEDRAPT 177 Query: 261 L-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312 L L D + G+ QR + E F++ F G L +++ + Sbjct: 178 LFLVDKATQGVAVQRTPRFMHTFVYEHPEFTFTDVFVPDDQVLGGLGEGYDITRAWFTEE 237 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +++I A ++ +L A +A RR G + + +++ +AD A+DIA A Sbjct: 238 RLMI----AARTIGAAERALELAREWAVRREQFGQPIANFQLIQGMLADCAVDIAVNRAY 293 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++A + + + +A+ A I K + + VI ++ GG GY ++ R Sbjct: 294 FLQVAWEISQPDA-DRKTLHAK--AAIAKLTASEASNRVIDRCVQIFGGRGYDRSYAVER 350 Query: 433 HYRESPANSILLGSGNAMVLDVL-NLLEKGTNLF 465 YRE + I G+ L + L+++GTN+ Sbjct: 351 LYRELRVDRIWEGTSEIQRLIISGELIKRGTNVL 384 >gi|239813137|ref|YP_002942047.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239799714|gb|ACS16781.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 399 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 115 FGTEAQKQKFLPKLATGEWIGCFGLTEPDHGSDPGSMVTRAKKVPGG-YSLSGAKMWISN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G+ GL + K+G R++ T E+ Sbjct: 174 SPIADVFVVWAKEVSESGTVGPIRGFVLEKGT-KGLSAPAIHGKVGLRASITGEIVMDGV 232 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F ++ GP L+SA +S + AE A Y R G Sbjct: 233 FCPEENAFPEVQGLKGP------FTCLNSARYGISWGALGAAEDCWHRARQYTLDRKQFG 286 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +I S RL DE + E + I K C Sbjct: 287 RPLAANQLIQKKLADMQTEITLGLQGSLRLGRMKDEGTASVE-------ITSIMKRNNCG 339 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 KALDIARLARDMMGGNGISDEFGVARH 366 >gi|169627170|ref|YP_001700819.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169239137|emb|CAM60165.1| Probable acyl-CoA dehydrogenase (FadE) [Mycobacterium abscessus] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 31/293 (10%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT + W PK S E + +G+TE GG+D+AA+ + K D Sbjct: 103 LTTDEQKQRWLPKFCSGE-------------MITAIGMTEPSGGSDLAALKTTAVKDGDD 149 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNR 282 + ++G K F+++ +D ++ A+ + + +E+G P G R +K+G Sbjct: 150 -WVINGSKTFITNGARADLVVVAARTAPELKAKGITLFAVEEGMP-GFERGRKLDKVGQP 207 Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIH 337 T EL F++ ++G++N G + M+ L + A+ +++ L E + Sbjct: 208 EADTAELFFTDVRVPAENVIGEVN--QGFISMMQRLPQERMGCAVANIAHAVAVLEETVE 265 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA+ R G + K IA++ + AA D+A + I A Sbjct: 266 YAKERKAFGQQIGSLQYNKFLIAELVTKLEAAQVY-------VDQAVLAHSKGELTAIDA 318 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W ++ VI ++ GG GY++E +AR + ++ I GS M Sbjct: 319 AKAKWWSSQVQNEVIDACVQLHGGYGYMKEYRVARAWMDARVTKIWAGSNEIM 371 >gi|120434501|ref|YP_860198.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803] gi|117576651|emb|CAL65120.1| acyl-CoA dehydrogenase [Gramella forsetii KT0803] Length = 391 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G++ +T+ + D Y L+G K W +SP +D ++ A+ E GR+ + Sbjct: 136 FGLTEPDHGSNPGGMTTNFKDNGDH-YLLNGAKMWISNSPFADIAVVWAKNEDGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G NK R++AT EL F N + N+ L Sbjct: 195 VERGME-----GFTTPETHNKWSLRASATGELIFDNV---KVPKENLMPNKSGLGAPLGC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ YA+ R G + + + ++ +A++ +I A + Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKEREQFGVPIASKQLQQKKLAEMITEITKAQLM 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++RL +E K+ S + + A K +MA + EA + +GG G E SI R Sbjct: 307 AWRLGTLRNEGKATSAQISMA-------KRNNVEMAIKIAREARQVLGGMGISGEYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|584714|sp|Q07417|ACADS_MOUSE RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor gi|192659|gb|AAA16714.1| short chain acyl-CoA dehydrogenase [Mus musculus] Length = 412 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ ++ D + L+G K W +S + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAASTTAREEGDS-WVLNGTKAWITNSWEASATVVFASTDRSRQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 211 SAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +A+A + YA R+ G L ++ +AD+AL + Sbjct: 263 IAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALE 322 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++E+A ++ A + A A+ +A++ +G GY+ E Sbjct: 323 SARLLTWRAAMLKDNKKPFTKESAMRKLAA-------SEAATAISHQAIQILGSMGYVTE 375 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 376 MPAERYYRDARITEIYEGT 394 >gi|298246002|ref|ZP_06969808.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297553483|gb|EFH87348.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 386 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 36/263 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255 L+E G+D A++ + ++ D Y L+G+K W ++ +D ++++A+ + C Sbjct: 124 LSEAAAGSDAASLQCRAERSGDS-YILNGNKLWVTNAGEADIYLLMARTAPGNDASGISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F + E +P G + + + K+G S+ T EL F N + VS E+ + Sbjct: 183 FAI----EKDTP-GFAFGKTERKMGLHSSPTRELIFENC------QIPVSQRLGEEGQ-- 229 Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363 A+ S+ G R+++ A YA+ R G + ++ +AD+A Sbjct: 230 -GFKIALSSLDGGRINIGAVAVGVAQAAFETARQYAQERQQFGKSIGTFQAIEFMLADMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I A+ L + A D+++ S++ + + A + K + A V A++ +GG+G Sbjct: 289 MKIEASRLLVYEAAYKLDQSRQPSKQVS---MYASMAKCFATDSAMEVTTNAVQVLGGAG 345 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y+ + + R+ R+ I G+ Sbjct: 346 YVRDYPVERYMRDVKVAQIFEGT 368 >gi|295395252|ref|ZP_06805460.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] gi|294972014|gb|EFG47881.1| butyryl-CoA dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] Length = 387 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 47/362 (12%) Query: 116 HCSIWDRS--FEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165 H WD + F V KQ ++ A +Y+ + +++A + T+ VA Sbjct: 34 HALEWDENHHFPVDVIKQTGELGMASIYVSEESGGSGLGRMDAALIFEALSTACPAVAAY 93 Query: 166 TTPRVHKDWAPKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223 + W F+ E D + P+ LTE G+D AA+ + + D Sbjct: 94 ISIHNMVAWVLDKFADE-DQKQRWLTPLTNFDKLSSYCLTEPGAGSDAAALATSARLDGD 152 Query: 224 GIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 Y L+G K F+S + SD+++++A+ G VG + + D GL + + K+G R Sbjct: 153 H-YVLNGVKQFISGAGSSDSYLVMART-GDVGAKGISAFMIDKDTPGLSFGTNEKKMGWR 210 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY-LDSAIMSV-----SGM 328 + T ++ +L ++ V PVED KI + LD +++ G Sbjct: 211 AQPTRQV--------MLDNVRV---PVEDRIGDEGTGFKIAMSGLDGGRLNIGACALGGA 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + +L +A+ Y R G L ++ +A + D+ AA + +R A+++D + Sbjct: 260 QSALEKAVTYMSERQAFGAELNQFQALRFEVAGMQADLEAARSFLWRAASAYDANDPNTT 319 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +++ + K ++ V A++ GG GY+ E + + R+ + IL G+ Sbjct: 320 ------LLSAMAKLKSTDISFDVANRALQIFGGYGYLAEYGVEKLVRDLRVHQILEGTNE 373 Query: 449 AM 450 M Sbjct: 374 IM 375 >gi|261753219|ref|ZP_05996928.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] gi|261742972|gb|EEY30898.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] Length = 320 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G F++ +P++D F ++A+ V+G G Sbjct: 60 LTEPDAGSDAASLKTTAVRDGD-FYILNGTNRFITNAPIADIFTVMARTAADVKGADGIS 118 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 119 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 172 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 173 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 232 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 233 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 285 Query: 430 IARHYRE 436 I R YR+ Sbjct: 286 IERFYRD 292 >gi|229164291|ref|ZP_04292223.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] gi|228619174|gb|EEK76068.1| Acyl-CoA dehydrogenase [Bacillus cereus R309803] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 127 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 186 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 234 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A Sbjct: 235 GFKVAMANLDVGRIGIGAQALGIAEAALTCAIDYAKEREQFGKPIAAQQGIGFKLADMAT 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 295 NVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVSIEAVQVFGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 348 TKDYPVERFFRDAKITQIYEGT 369 >gi|15607385|ref|NP_214758.1| acyl-CoA dehydrogenase FADE5 [Mycobacterium tuberculosis H37Rv] gi|15839625|ref|NP_334662.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|148660009|ref|YP_001281532.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra] gi|148821438|ref|YP_001286192.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11] gi|167968966|ref|ZP_02551243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis H37Ra] gi|215406242|ref|ZP_03418423.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987] gi|215409734|ref|ZP_03418542.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 94_M4241A] gi|215448531|ref|ZP_03435283.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85] gi|218755985|ref|ZP_03534781.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503] gi|219556043|ref|ZP_03535119.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17] gi|254233622|ref|ZP_04926948.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C] gi|254366690|ref|ZP_04982734.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str. Haarlem] gi|254549185|ref|ZP_05139632.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185108|ref|ZP_05762582.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A] gi|260199242|ref|ZP_05766733.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46] gi|260203389|ref|ZP_05770880.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85] gi|289441621|ref|ZP_06431365.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46] gi|289445777|ref|ZP_06435521.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A] gi|289568148|ref|ZP_06448375.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17] gi|289572823|ref|ZP_06453050.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85] gi|289748014|ref|ZP_06507392.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987] gi|289760350|ref|ZP_06519728.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85] gi|289764361|ref|ZP_06523739.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503] gi|294994719|ref|ZP_06800410.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 210] gi|298523712|ref|ZP_07011121.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|306774335|ref|ZP_07412672.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001] gi|306779077|ref|ZP_07417414.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002] gi|306782866|ref|ZP_07421188.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003] gi|306787234|ref|ZP_07425556.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004] gi|306791790|ref|ZP_07430092.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005] gi|306795832|ref|ZP_07434134.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006] gi|306801830|ref|ZP_07438498.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008] gi|306806041|ref|ZP_07442709.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007] gi|306970437|ref|ZP_07483098.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009] gi|306974668|ref|ZP_07487329.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010] gi|307082377|ref|ZP_07491547.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011] gi|307082720|ref|ZP_07491833.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012] gi|2909448|emb|CAA17336.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE5 [Mycobacterium tuberculosis H37Rv] gi|13879743|gb|AAK44476.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|124603415|gb|EAY61690.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis C] gi|134152202|gb|EBA44247.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis str. Haarlem] gi|148504161|gb|ABQ71970.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium tuberculosis H37Ra] gi|148719965|gb|ABR04590.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis F11] gi|289414540|gb|EFD11780.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T46] gi|289418735|gb|EFD15936.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CPHL_A] gi|289537254|gb|EFD41832.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis K85] gi|289541901|gb|EFD45550.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T17] gi|289688542|gb|EFD56030.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis 02_1987] gi|289711867|gb|EFD75883.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis GM 1503] gi|289715914|gb|EFD79926.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis T85] gi|298493506|gb|EFI28800.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|308217167|gb|EFO76566.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu001] gi|308327926|gb|EFP16777.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu002] gi|308332385|gb|EFP21236.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu003] gi|308336136|gb|EFP24987.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu004] gi|308339768|gb|EFP28619.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu005] gi|308343773|gb|EFP32624.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu006] gi|308347493|gb|EFP36344.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu007] gi|308351392|gb|EFP40243.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu008] gi|308352120|gb|EFP40971.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu009] gi|308356070|gb|EFP44921.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu010] gi|308360025|gb|EFP48876.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu011] gi|308367590|gb|EFP56441.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis SUMu012] gi|323717235|gb|EGB26444.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis CDC1551A] gi|326906000|gb|EGE52933.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis W-148] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + + VP+ L E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|297561734|ref|YP_003680708.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846182|gb|ADH68202.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 385 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 37/262 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG------RVGC 255 L+E G+D +A+T++ + DG W +D + + A+ + C Sbjct: 127 LSEAASGSDASALTTRAEADGDGYRVNGAKAWITHGGQADYYTLFARTGAPDSGARGISC 186 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-- 313 F VP GL + K+G S S T G LL D+ + + + Sbjct: 187 FHVP-----ADTPGLGSAAPERKMGMNS--------SITAGVLLDDVRLGADALVGERDR 233 Query: 314 ----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 L LDS + ++ V LA+A + Y+R RH G + D + +AD+A Sbjct: 234 GFGIALSALDSGRLGIAACAVGLAQAALDAAVDYSRERHQFGTAIGDFQGVGFMLADMAT 293 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +AA+ L A D ++AA A+++A T A V +A++ GG GY Sbjct: 294 QVAASRELYLSAARLRDAGLPFGKQAAMAKLLATDT-------AMRVTTDAVQVFGGYGY 346 Query: 425 IEERSIARHYRESPANSILLGS 446 + + R+ RE+ I+ G+ Sbjct: 347 TRDFPVERYMREAKVLQIVEGT 368 >gi|212640302|ref|YP_002316822.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212561782|gb|ACJ34837.1| Long chain acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 594 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/308 (24%), Positives = 131/308 (42%), Gaps = 39/308 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W ++ +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTAKLNAEGTHYILNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 R G+ + K+G +S++T L + LLG+ + G + IL Sbjct: 210 ERDF-----PGVSTGAEEKKMGIKSSSTRTLILQDALVPKENLLGE--IGKGHIIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +V G + +L I YA +R + + + +A +A + AA + Sbjct: 263 NIGRYKLGVGAVGGAKRALEVTIQYANQRQQFKTPISKFTLTQEKLATMASKLYAAESSV 322 Query: 374 FRLANSF--------DEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGG 421 +R F DE +E A A I + K + +M ++ E ++ GG Sbjct: 323 YRTVGLFEARMGQLTDEQAKDGKETAKAIAEYAIECSLNKVFATEMLDYIVDEGVQIHGG 382 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLF 469 G+++E I R YR+S N I G+ L V L LL+K L E+L Sbjct: 383 YGFMQEYEIERMYRDSRINRIFEGTNEINRLLVPGMYLRKAMKGELPLLQKAQQLQEELM 442 Query: 470 STLEQDLG 477 + +++G Sbjct: 443 MLMPEEVG 450 >gi|262396838|ref|YP_003288691.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25] gi|262340432|gb|ACY54226.1| putative acyl-CoA dehydrogenase [Vibrio sp. Ex25] Length = 335 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 37/308 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP K + PK+ D T+ L ++E G+D+ ++ + + D + Sbjct: 56 TPSQRKKYLPKLI----DGTHVGA---------LAMSEPNAGSDVISMQLKAENKGDH-F 101 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 L+G+K W + P +D ++ A+ + G + + + + G + + +K+G R + Sbjct: 102 VLNGNKMWITNGPDADIVVLYAKTDVNAGSRGITAFIVERNVEGFSHAQKLDKLGMRGSN 161 Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYA 339 T EL F+N +LG+LN VE + + + +++ M+ + + Y Sbjct: 162 TCELVFNNCVVPKENILGELNQG---VEVLMSGLDYERVVLAAGPLGIMQACMDIVVPYV 218 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + + +++ IAD+ ++AA A + +A + D + ++AA A + Sbjct: 219 HEREQFGKSIGEFQLVQGKIADMYSRMSAAKAYVYTVAAACDRGNATRKDAAGAIL---- 274 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++A + +A++ +GG+GYI E R R++ I G+G + + +L Sbjct: 275 ---YSAELATQMALDAIQLLGGNGYINEYPAGRLLRDAKLYEI--GAGTSEIRRML---- 325 Query: 460 KGTNLFEQ 467 G LFE+ Sbjct: 326 IGRELFEE 333 >gi|119508872|ref|ZP_01628024.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414] gi|119466401|gb|EAW47286.1| hypothetical protein N9414_20870 [Nodularia spumigena CCY9414] Length = 1205 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 33/348 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G + AI SQ DG + L G K W S+ + + + E + F+V Sbjct: 689 FALTETGAGANPQAIESQAISDGDG-WRLRGEKIWSGSAAWAGVINVFVKHESGISGFVV 747 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELE-FSNTFGFLLGDLNVSTGPVEDMKIL 315 R G+P GL +G R TV LE T LLGD+ +D + Sbjct: 748 RR----GTP-GLRQGGEALTMGMRGMVQNTVYLEDIPVTSAELLGDVGAGMNVAQDAMMY 802 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A V GM+ + Y+ RR ++ G L+D PV+ + ++ I A +L R Sbjct: 803 GRLAIASACVGGMQRCVQLMWRYSERRQIATGKLLDHPVVLYRLQELTNAITAVNSLVMR 862 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGYIEERSI 430 + D + P Y CK+ AP +A ++ +GG GYIE Sbjct: 863 VGKLLDAGDN-----------IPAEVYTACKISAPEFYWQAADLLVQSLGGRGYIESNIA 911 Query: 431 ARHYRESPANSILLGSGNAMV-LDVLNLLEKGTNLFEQLFSTLEQ-DLGSSGKKVITILR 488 + R++ I G + +L++G L L TL ++G K + +R Sbjct: 912 PQILRDARILRIFEGPTETLCGFLGARVLKQGQTLQNFLCQTLGAVEVGQRLKDAVDKIR 971 Query: 489 DSISLCKEDKGLA--RFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 + C +D + R++ ++ ++ A L+ A +++NRF Sbjct: 972 EC---CCDDANIKVQRWIYHQLGKLATEAILWAVLEEPSATAWVKNRF 1016 >gi|145589736|ref|YP_001156333.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048142|gb|ABP34769.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 383 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + DG + L+G K F+S + ++ F + G+ G Sbjct: 126 LTEPQAGSEANNLKTRA-VLKDGSWTLNGSKQFVSNGKRAKLAIVFAVTDPELGKKGISA 184 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308 FLVP G R++ K+G R + T + N G L ++ Sbjct: 185 FLVPT-----DTPGFIVNRVEKKLGIRGSDTCAITLDNCVIPEENILGPRGKGLAIALSN 239 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + A+ Y++ R G LID P + +AD+ I A Sbjct: 240 LEGGRIGI----AAQALGIARAAFESALKYSKERIQFGVPLIDHPPIAHFLADMHTQINA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A+ + EA+ A++ A +M+ V ++A++ GG GY+E+ Sbjct: 296 ARLLILQAASMKERGLPCLSEASQAKLFA-------SEMSEVVCSKAIQIYGGYGYLEDY 348 Query: 429 SIARHYRESPANSILLGS 446 + R+YR++ I G+ Sbjct: 349 PVERYYRDARITQIYEGT 366 >gi|20162439|gb|AAM14583.1|AF494018_2 butyryl-CoA dehydrogenase [Clostridium beijerinckii] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + +G Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + + + S G +L+NK+G R+++T EL N ++ N+ + + I + Sbjct: 181 ISAFIVEKSFPGFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGFGIAMK 237 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ + +A EA++Y + R G L ++ IA++ + I AA Sbjct: 238 TLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKY 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + S +AA A++ A +A V +A++ GG GY +E + Sbjct: 298 LVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTKEYPVE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKICEIYEGT 365 >gi|85858066|ref|YP_460268.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB] gi|85721157|gb|ABC76100.1| acyl-CoA dehydrogenase, medium-chain specific [Syntrophus aciditrophicus SB] Length = 384 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/263 (20%), Positives = 116/263 (44%), Gaps = 34/263 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G ++E G+D+ AI ++ K + + ++G K W + P++ + L + + G Sbjct: 123 GYLVSEPGAGSDVKAIRTKAVKDGND-WVINGTKCWATNGPIASFYSCLCRTKDDKGVQG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLN 303 L + + GL ++++K+G R + T E+ E +N F + D + Sbjct: 182 YSFFLVERNTPGLSVGKIEHKMGMRGSQTSEVILEDVRVPAENLLGELNNGFKLAMKDFD 241 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 +S + A ++ + A+ Y+R R+ G L + ++ + IAD A Sbjct: 242 MSRPAI-----------AAQALGISEGAFAQMETYSRERYTFGKPLCEHGMITQIIADSA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A L ++ A+ +D+ K ++ +A + K++ A + +A++ GG G Sbjct: 291 ALIEAGRGLIYQAADLYDKGKKNTK-------LASMAKFFMGDAAVKITTDAIQVFGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y + + R +R++ I G+ Sbjct: 344 YTHDYPVERMFRDAKLTQIFEGA 366 >gi|323489846|ref|ZP_08095070.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] gi|323396481|gb|EGA89303.1| acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] Length = 588 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 46/341 (13%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219 + TP+ + + PK+ S E+ IG LTE G+D ++A T+ Sbjct: 120 ITYFGTPQQKETYLPKLASGEF--------------IGAYCLTEPGAGSDALSAKTTAKL 165 Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G K F++ + +D FI+ A+V G ++E P GL + K Sbjct: 166 NEEKTHYIINGTKMFITNAEFADTFIVYAKVNGTA---FTAFIVEKDHP-GLSLGPEEQK 221 Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVS 331 +G + ++T + F + LLG+ + G + + +L L SA M + + Sbjct: 222 MGIKGSSTRAVIFEDCEVPVENLLGE--IGKGHIIALNVLNLGRYNLGSACMGAA--KYG 277 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-----KSR 386 L + Y R G + + + +A++AL I A+ +L +R A + A S+ Sbjct: 278 LELTLKYTSERRQFGKAIAEFSATQEKLANMALQIYASESLQYRTAGYLESALGDLYDSQ 337 Query: 387 SEEAAYARIMAPITKYWCCKMAPA-----VIAEAMECIGGSGYIEERSIARHYRESPANS 441 ++M + CK+ + ++ EA++ GG G+I+E I + YR+S N Sbjct: 338 DHPEIAKQLMEYAVECAVCKVHGSETLDFIVDEALQLHGGYGFIKEYKIEQLYRDSRINR 397 Query: 442 ILLGSGNA-MVLDVLNLLE---KGTNLFEQLFSTLEQDLGS 478 I G+ +L V NLL+ KG ++L +++ ++L + Sbjct: 398 IFEGTNEVNRLLIVGNLLKQTAKGKVPLQKLMASVVEELAA 438 >gi|118616886|ref|YP_905218.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99] gi|118568996|gb|ABL03747.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium ulcerans Agy99] Length = 621 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S SD ++LA+ EG Sbjct: 174 LTEPDAGSDVGAGRTKAVEQADGSWHIDGVKRFITSGDSDDLFENIFHLVLARPEGAGPG 233 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL G+L+ Sbjct: 234 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLI 293 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 294 GEVHEGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 348 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + + A++ Sbjct: 349 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEAAHGVDAKLAVKINDL 408 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 409 LLPVVKGVGSEQAYANLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 459 >gi|73537716|ref|YP_298083.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] gi|72121053|gb|AAZ63239.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] Length = 395 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257 LTE G+D ++ + ++ D Y L G K F++ +P++D F + A+ E G G Sbjct: 122 FALTEPDAGSDATSLRTTARREGDH-YVLDGTKCFITNAPIADLFTVFARSEPGVAGAPG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + L+E G+P GL + K+G + ++ N V + K Sbjct: 181 ISAFLIERGTP-GLTTGPAERKMGQHGSPVGDVYLEN--------CRVPASAIVGGKPGT 231 Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +A+ +++ R++LA E + YA RR G + D ++++ IAD Sbjct: 232 GFKTAMKALNKQRINLAGLCIGPAVRLVDEMVRYATRRSQFGKPIADYQLVQQMIADSNT 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA AL A D + + EA+ + K + +MA V A++ GGSGY Sbjct: 292 ELHAARALVLETARRRDNGEDVTMEAS-------MCKMFASEMAGRVADRAVQVFGGSGY 344 Query: 425 IEERSIARHYRE 436 + R YR+ Sbjct: 345 MARTVAERFYRD 356 >gi|134299349|ref|YP_001112845.1| butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1] gi|134052049|gb|ABO50020.1| Butyryl-CoA dehydrogenase [Desulfotomaculum reducens MI-1] Length = 378 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 26/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG----CF 256 LTE G+D+AA+ + K+ Y ++G K F+++ ++D F + A V+ G CF Sbjct: 124 LTEPGAGSDVAALKTTA-KLEGDEYVINGSKCFITNGGVADIFTVCASVDRSKGHKGLCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + +E P G+ + +NK+G RS++T ++ F + + N+ + KI + Sbjct: 183 FI---VEKDRP-GVSVGKKENKLGIRSSSTTDVIFEDV---RIPKENLLGKEGDGFKIAM 235 Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + V+ + V +A+A +YA+ R G + ++ +AD+A+ I AA Sbjct: 236 KALDMSRPMVAALAVGVAQAAMEYATNYAKERMAFGKPIAALQGIQFMLADMAMQIEAAR 295 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + D S +++ ++K + M V +A++ +GG GYI+E + Sbjct: 296 LLVHKACWLKDAGLPYS-------VLSSLSKGFAGDMCMKVTTDAVQVLGGYGYIKEYPV 348 Query: 431 ARHYRESPANSILLGS 446 ++ R++ I G+ Sbjct: 349 EKYMRDAKIMQIYEGT 364 >gi|332528868|ref|ZP_08404842.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC 19624] gi|332041727|gb|EGI78079.1| acyl-CoA dehydrogenase-like protein [Hylemonella gracilis ATCC 19624] Length = 602 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 146/354 (41%), Gaps = 61/354 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + L T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYECLQAHGTEAQKKQFLPKLVSGEWLGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGCFLVP- 259 D+ + ++ + +DG Y ++G K F+SS +D ++LA++ +G G L Sbjct: 175 DLGLLRTKAEPQADGTYKINGTKIFISSGDNDFTENIVHLVLARLPDAPKGSKGISLFAV 234 Query: 260 ---RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 +L DGS NG+ L++K+G NAT ++ N G L+G P + ++ Sbjct: 235 SKYQLKADGSLGESNGIYCGGLEHKMGIHGNATCQMVLDNAVGTLVGQ------PHKGLQ 288 Query: 314 -ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGG---------ILIDQPV 354 + + +++A + V + L E A+ YA+ R +SG I++ V Sbjct: 289 AMFVMMNAARLGVGNQSLGLTEVAYQNALAYAKDRLQMRSLSGTKAKDKEADPIIVHPDV 348 Query: 355 MK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 K +A A+ +A AL + + R + ++ PI K + Sbjct: 349 RKMLLTAKAYAEGGRALACYCALLLDQHLHHPDEQVRQDSDELLALLTPIIKAFLTDNGF 408 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + GG GYI+E + + R++ N I G+ LD+L G N Sbjct: 409 QATVMCQQVFGGHGYIKEWGMEQFVRDARINMIYEGTNTVQSLDLLGRKVLGNN 462 >gi|325299703|ref|YP_004259620.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170] gi|324319256|gb|ADY37147.1| Butyryl-CoA dehydrogenase [Bacteroides salanitronis DSM 18170] Length = 569 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANQCWRLNGVKRFITNGDANLHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYDEGLAYAKDRKQFGKAIIEFPAVYDMLATMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDIARERKLTPEERQEQKRYAKLADSFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMMEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|229176018|ref|ZP_04303513.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] gi|228607450|gb|EEK64777.1| Acyl-CoA dehydrogenase [Bacillus cereus MM3] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLVIGKDEHKMGLLGSRTVQLTFE--------DMRV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVGVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|218295830|ref|ZP_03496610.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218243568|gb|EED10096.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 387 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 33/282 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247 P + A+G GLTE G+D AA+ ++ + + G + L+G K F++ ++ ++++A Sbjct: 114 PKLASGEALGAWGLTEPGAGSDAAALKTRAEAVPGG-FLLNGTKQFITQGSVAGVYVIMA 172 Query: 248 QV------EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 + E R + F R GL R + K+G ++ T +L + F Sbjct: 173 RTDPAPSPEKRHLGISAFAFFR-----PEKGLRVGRKEEKLGLNASDTAQLLLEDLFVPE 227 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQP 353 G L D +L LD + ++ M V L A + +A+ R G + + Sbjct: 228 EGLLGERGKGFYD--VLRVLDGGRIGIAAMAVGLGRAALDFALRHAKEREAFGRSIAEFQ 285 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +A++A ++ AA L + A D + + EAA A++ A C Sbjct: 286 GVSFKLAEMATELEAARLLYLKAAELKDAGRPFALEAAQAKLFASEVAVRACD------- 338 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 EA++ +GG GY+++ + R++R++ I G G + +L V+ Sbjct: 339 EAIQILGGYGYVKDYPVERYWRDARLTRI--GEGTSEILKVV 378 >gi|239828623|ref|YP_002951247.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] gi|239808916|gb|ACS25981.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 28/272 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D++++ ++ + D Y L+G K W + ++ +++ A + + Sbjct: 124 GLSEPGAGSDVSSMKTRAVRDGD-YYVLNGSKVWITNGGEAEIYVVFAVTDPEKRHKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V E G+P G + + K+G RS+ T EL F + + N+ E KI Sbjct: 183 AFIV----EKGTP-GFSIGKKEKKLGIRSSPTTELIFEDC---RIPKENLLGQEGEGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ LD ++ V +A+ AI YA++R G + +Q + +AD+A I A Sbjct: 235 AMMTLDGGRNGIAAQAVGIAQGALDAAIEYAKQRVQFGKPIAEQQGVAFKLADMATAIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A + +A A++ A T A V +A++ GG GY ++ Sbjct: 295 ARLLTYQAAWLETNGLPYGKASAMAKLFAGDT-------AMKVTVDAVQIFGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R R++ I G+ L + +L + Sbjct: 348 PVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|46203726|ref|ZP_00051081.2| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 332 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 49/286 (17%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL+ +P + PK+ + T + LTE GT Sbjct: 1 MYPGLTQGAIAALLVHGSPEQKSTYLPKMVEGAWTGT-------------MNLTEPHCGT 47 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ DG Y L+G K F+S+ D +++A++EG + F+V Sbjct: 48 DLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVV 107 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L + G N + L++K+G NAT + + G+L+G+ N + M Sbjct: 108 PKFLVNADGSLGERNPVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGEENRGLAAMFVMM 167 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIAD 361 L + + V+ A+ YA+ R + +I P ++R + Sbjct: 168 NEARLAVGVQGLGQSEVAYQNAVAYAKERLQGRALTGAKEPAKAADPIIVHPDVRRTLMQ 227 Query: 362 I-ALDIAAA-----TALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 I A + AA TAL+ +A+ ++A+ R +M P+ K Sbjct: 228 IRAFNEAARALILWTALNSDIAHRSEDAQQRQAAEDMLGLMTPVVK 273 >gi|158520946|ref|YP_001528816.1| acyl-CoA dehydrogenase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509772|gb|ABW66739.1| acyl-CoA dehydrogenase domain protein [Desulfococcus oleovorans Hxd3] Length = 541 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 47/365 (12%) Query: 136 RAARLYLMAQLEAGHLMSPSVTSASMVALMT----TPRVHKDWAPKIFSREYDPTNKAPM 191 R +LYL++Q L+ P + + M L+ TP I D N Sbjct: 118 RFIKLYLLSQNSEAGLVCPLICTWGMADLLEKYADTPETRH-----ILEHTRDGIN---- 168 Query: 192 QKTSVAIGLG-LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 AIG ++E +GG+D+ A + + DG + L G K+F S+ +D ++ A+ + Sbjct: 169 --GEFAIGAQFVSEIQGGSDVPANLLEAVE-EDGRWRLYGTKFFCSAAHADYSVVTAKPK 225 Query: 251 G--RVGCFLVPRLLEDGSP----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 G V F++P L+ NG RLK K+G T E+ F+ + +G LN Sbjct: 226 GSEEVALFVIPMWLDGNREKEIRNGFTIDRLKWKMGTVELPTAEITFNGAAAYPVGPLNR 285 Query: 305 STGPVEDMKILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 V + + L +I S GM L E Y R G L D P+M A Sbjct: 286 GVANVVGIVLTCSRLALSIGSAGGMARGLREVEKYGEFRTAFGIALKDFPMMAAQYLTNA 345 Query: 364 LDIAAATALSFRLANSFDE---------------AKSRSEEAAY-------ARIMAPITK 401 + A +F++ +F E S+++E R + + K Sbjct: 346 GCVRRTIAGNFKVYKAFIELPGGLSVGLDGGGLSVSSKADEPPELRKHRFDVRQLILLQK 405 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + A + + GG G +E+ S R +R+ N + G N ++ + +K Sbjct: 406 ITVARDAIDLSRLGISAFGGHGVMEDFSSFPRMFRDGMVNELWEGPRNVLLTQLFMDFQK 465 Query: 461 GTNLF 465 N + Sbjct: 466 VRNWY 470 >gi|148656424|ref|YP_001276629.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148568534|gb|ABQ90679.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1] Length = 414 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 44/277 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K LTE GTD A+ + ++ D Y L+G K W + ++D F++ A+ Sbjct: 128 PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGD-YYILNGEKTWISLADIADNFLVFAK 186 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + G CF+V R + G + K+G R+ NT +L D+ Sbjct: 187 TDPSKGNRGISCFIVERTMP-----GFSSHPIHGKLGVRA--------GNTGSVILEDVR 233 Query: 304 VSTGPV--------EDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349 V PV E KI + LD+ +V+ ++ SL +I YA+ RH G + Sbjct: 234 V---PVANRVGEEGEGFKIAMAALDNGRYTVAAGATGLIQASLEASIRYAKERHTFGVPI 290 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + ++KR I+ + + + L +R ++ + + E A+ A ++ + Sbjct: 291 AEHQLVKRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSFEAAD--- 347 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ G GY +E I R+ R + I G+ Sbjct: 348 ----DAIQIHGAYGYSDEYPIERYLRNARGAIIYEGT 380 >gi|28872567|ref|NP_795186.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato str. DC3000] gi|28855822|gb|AAO58881.1| acyl-CoA dehydrogenase, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 393 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|312109623|ref|YP_003987939.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311214724|gb|ADP73328.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 594 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 63/357 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W ++ +D FI+ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFIVYAKVDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G P G+ + K+G +S++T L + LLG+ V G V IL Sbjct: 210 ER----GFP-GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--VGKGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368 + +V G + +L + YA +R QP+ K A +A + A Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFSLTQEKFATMASRLYA 317 Query: 369 ATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +R FDE K ++ A I + K++ + ++ E + Sbjct: 318 TESSVYRTVGLFDERMGLLDEEKAKDGKEIAKSIAEYAIECSLNKFFATETLDYIVDEGV 377 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464 + GG G+++E I R YR+S N I G+ L V L LL+K L Sbjct: 378 QIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQL 437 Query: 465 FEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521 E+L +++G + +++K L R +KIAL ++ A R G Sbjct: 438 QEELIMLAPEEVGD-------------GVLEQEKYLVRN-AKKIALMAAGLAAQRFG 480 >gi|253797168|ref|YP_003030169.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435] gi|289552497|ref|ZP_06441707.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605] gi|297632725|ref|ZP_06950505.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207] gi|297729699|ref|ZP_06958817.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN R506] gi|313657025|ref|ZP_07813905.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN V2475] gi|253318671|gb|ACT23274.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 1435] gi|289437129|gb|EFD19622.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 605] gi|328456955|gb|AEB02378.1| acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis KZN 4207] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + + VP+ L E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 224 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|126641862|ref|YP_001084846.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 516 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 74 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 133 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 134 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 192 Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + G L+G+ + M +I + L +A + +G A+ YA+ R V G Sbjct: 193 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 247 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388 LI ++R + ++ A AL A +S ++A+ R + Sbjct: 248 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 307 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 308 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 367 Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 LD+L L +G + L E++ +T+E K L+D + L R Sbjct: 368 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIEL------AKAEPSLKDHADQLDQKWQLIR 421 Query: 503 FLTEKI 508 +TEK+ Sbjct: 422 NVTEKL 427 >gi|1903328|emb|CAB07496.1| butyryl-CoA dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 379 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 19/264 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 P+ K GLTE GTD A Q + DG Y L+G + + +D +I+ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGSIFITNGGKADIYIIFAM 170 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + + G +++ K+G R+++T EL F + ++ N+ Sbjct: 171 TDKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDC---IVPKENLLGKE 227 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ R+ +A+A I YA+ R G + ++ IAD+ Sbjct: 228 GEGFKIAMATLDGGRIGIAAQRLGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIADM 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I A+ L + A + EAA A++ A T A V + ++ GG Sbjct: 288 ATRINASRWLVYNAAWRKQVGLPYTMEAAMAKLYASET-------AMFVTTKTVQIFGGY 340 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G+ ++ + R R++ I G+ Sbjct: 341 GFTKDYPVERFMRDAKITEIYEGT 364 >gi|229076556|ref|ZP_04209516.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] gi|229099775|ref|ZP_04230700.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] gi|229118837|ref|ZP_04248186.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228664638|gb|EEL20131.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-3] gi|228683664|gb|EEL37617.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-29] gi|228706589|gb|EEL58802.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-18] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDN-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + GL + ++K+G + TV+L F + ++ N+ + K+ + LD Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFED---MIVPAENLLGEEGQGFKVAMANLD 244 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + +AEA I YA+ R G + Q + +AD+A + AA L + Sbjct: 245 VGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVY 304 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A+ + +EA+ I K + K A V EA++ GG GY ++ + R + Sbjct: 305 RAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFF 357 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 358 RDAKITQIYEGT 369 >gi|52140220|ref|YP_086611.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus cereus E33L] gi|51973689|gb|AAU15239.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus cereus E33L] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 122 FALTEPNAGSDAGSLKSRAVKKGD-YYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLFGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364 >gi|213968564|ref|ZP_03396707.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1] gi|301383536|ref|ZP_07231954.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13] gi|302062586|ref|ZP_07254127.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40] gi|302130253|ref|ZP_07256243.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926852|gb|EEB60404.1| acyl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1] Length = 393 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGIAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|171317253|ref|ZP_02906451.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5] gi|171097572|gb|EDT42408.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5] Length = 1268 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 27/275 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255 +TE G+ A+TS+ ++I G + +SGHK W SS + + F A G VG Sbjct: 734 FAITEPGAGSHPRAMTSRARRIEGGDWLVSGHKCWSGSSAWAGIINVFSRRADGAGMVGL 793 Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313 + P G+P + + L + ++ L+ + + LG+L ++ Sbjct: 794 AVRP-----GTPGVRIGAEELTMGVRGMIQNSIHLDRARISDACRLGELGQGMTVAQEA- 847 Query: 314 ILIYLDSAIMSV----SGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++SA + + +G+ A+ +H Y RR ++ G+L+D P+ ++ + D+ IA Sbjct: 848 ----MNSARLGIAAICTGVMKRCAQLMHRYGARREIATGLLLDNPLSRQRLGDLRHRIAG 903 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 AL LAN D E+A I K ++ + E M+ +GG GYIE Sbjct: 904 LNALVDHLANDLDNGGDVPEDALL------IAKILGSELLSQSVDEMMQFLGGRGYIETN 957 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + +R++ I G +++ + + L G++ Sbjct: 958 LAPQIFRDARLTRIFEGPTETLLVHLGSRLLNGSD 992 >gi|118480376|ref|YP_897527.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|196045417|ref|ZP_03112648.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|229187568|ref|ZP_04314708.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] gi|118419601|gb|ABK88020.1| butyryl-CoA dehydrogenase [Bacillus thuringiensis str. Al Hakam] gi|196023624|gb|EDX62300.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB108] gi|228595935|gb|EEK53615.1| Acyl-CoA dehydrogenase [Bacillus cereus BGSC 6E1] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I+YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAINYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|120401291|ref|YP_951120.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954109|gb|ABM11114.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 611 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 50/372 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIDGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ E G P NG+ +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFHFDPETGEPGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 G+++ + D+ + +++ + A+ YA+ R V G L Sbjct: 284 GEVHEGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKER-VQGADLTQMTDKTAPR 342 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-----EEAAYA--RIMAPI 399 P ++R++ AL A D +++ E A +M PI Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYTATHQDAEVAKALYGIEPELALKVNDLMLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ D Sbjct: 403 VKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462 Query: 457 LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASS 513 + +KG L + +EQ + +G + R ++ ED +G+A LT + A Sbjct: 463 VRDKGVAL-AHVAGQIEQFVKAETGNGRLKAERALLATALEDVQGMAASLTGYLMASQED 521 Query: 514 AAALYRAGMNDI 525 A ++Y+ G+ + Sbjct: 522 AKSIYKVGLGSV 533 >gi|328770903|gb|EGF80944.1| hypothetical protein BATDEDRAFT_24489 [Batrachochytrium dendrobatidis JAM81] Length = 406 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 35/259 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D + ++ K+ G Y L+G K W +SP++D F++ A Sbjct: 133 PDLATGKKIGAFGLTEPNHGSDPGGMETRATKLG-GTYVLNGSKTWISNSPIADVFVVWA 191 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLL 299 + + + F +LE G P GL +K K+ R++ T VE+ SN + Sbjct: 192 KTDDNEIRGF----ILERGMP-GLETPTIKGKLSLRASCTGMIMMDDVEIPVSNMLPLVK 246 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 G L TGP L++A ++ + AE A Y R G L + Sbjct: 247 G-LKACTGP------FGCLNNARFGIAWGALGAAESCVESAREYVLNRKQFGVPLARFQL 299 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +++ +AD +I AT ++++ D+ K+ E M K C A A+ + Sbjct: 300 IQKKLADAVSEIGLATMAAYQVGRLKDQDKAAPE-------MISTVKRNSCGKALAIARD 352 Query: 415 AMECIGGSGYIEERSIARH 433 + +GG+G +E I RH Sbjct: 353 CRDMLGGNGISDEYHIIRH 371 >gi|295399926|ref|ZP_06809907.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978329|gb|EFG53926.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 381 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 51/297 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK S E + + +TE G+D+A I++ K D Y ++G Sbjct: 108 RKWLPKCVSGE-------------IITAIAMTEPGAGSDLAGISTTAIKDGDH-YIVNGQ 153 Query: 232 KWFLSSPMSDAFIMLAQVEGRVGCFLVPR-----------LLEDGSPNGLCYQRLKNKIG 280 K F+++ + +++A C P ++E +P G R +K+G Sbjct: 154 KTFITNGIHADLVIVA-------CKTDPNAKPSHKGISLLVVERDTP-GFTRGRKLDKVG 205 Query: 281 NRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 + T EL F N G ++ ++++ AI + + V Sbjct: 206 LHAQDTAELFFHDAKVPKENLLGEEGKGFYYLMEKLQQERLIV----AIAAQTAAEVMFE 261 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 Y ++R G + + ++ +A+++ +I + + K+ + A Sbjct: 262 LTRQYVKQRSAFGKRISEFQTVQFRLAEMSTEIFIGRTFVDHVIEEHMQGKNVVTHVSMA 321 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W +MA + AE+M+ GG GY+EE IAR YR+ P ++I G+ M Sbjct: 322 -------KWWITEMAKRIAAESMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 371 >gi|294628534|ref|ZP_06707094.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14] gi|292831867|gb|EFF90216.1| butyryl-CoA dehydrogenase [Streptomyces sp. e14] Length = 383 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 43/301 (14%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + W P + S EY +G GLTE G+D ++ ++ Sbjct: 95 AKTIAAWGDEEQKRRWLPGLTSGEY--------------VGCFGLTEPGTGSDAGSLATR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + D Y ++G K F+++ +D ++ A+ G V L GL + + Sbjct: 141 AVRDGDD-YVINGAKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPADTPGLTRRTIH 199 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAI----MSVSGMRV 330 K+G R AT EL +L D+ V + + K SA+ MSV+ V Sbjct: 200 GKLGLRGQATAEL--------VLEDVRVPASAMLAPEGKGFAVAMSALAKGRMSVAAGCV 251 Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +A+A + YA R G + +++ I+DIA+D+ AA L++R+A+ D Sbjct: 252 GIAQAALDAAVRYAGEREQFGKTIAHHQLVQELISDIAVDVDAARLLTWRVADLIDRGLP 311 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + E++ A++ A + A A++ GG GYI+E + R++ ++ G Sbjct: 312 FAVESSKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYEG 364 Query: 446 S 446 + Sbjct: 365 T 365 >gi|302894009|ref|XP_003045885.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726812|gb|EEU40172.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 442 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 39/305 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +P + K W P++ T+ L+E G+D A+ ++ + +DG Sbjct: 162 SPALKKKWLPRL--------------ATNTVASFCLSEPVSGSDAFALATKATETADGFK 207 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 G W +S S FI+ A ++ G + L+E G+P G + + K+G R+++ Sbjct: 208 INGGKMWITNSMESGLFIVFANLDPSKGYKGITAFLVEKGTP-GFSIAKKEKKLGIRASS 266 Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAI 336 T + + LLG+ K I L+ + ++ LA A Sbjct: 267 TCVINLDDVVVPKENLLGERG------HGYKYAISLLNEGRIGIAAQMTGLALGAWENAA 320 Query: 337 HYARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 Y G L+ + M+ IA +IAAA AL + A + ++ +AA A++ Sbjct: 321 RYVWNDRKQFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAARKKEAGENFVRDAAMAKL 380 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++A V A+E +GG G++ E +++R+S +I G+ N + + Sbjct: 381 -------YASQVAGRVSGLAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIA 433 Query: 456 NLLEK 460 LL+K Sbjct: 434 KLLQK 438 >gi|170742081|ref|YP_001770736.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168196355|gb|ACA18302.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 376 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----C 255 LTE G+D A+T++ +++ + Y LSG K F++S S D I+ A + G Sbjct: 122 LTEPGAGSDAGAVTARARRVGN-RYVLSGTKQFITSGRSADLAIVFAVTDPEAGKRGISA 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGP 308 F+VP +P G R+++K+G R++ T ++ F + T LLG L ++ Sbjct: 181 FIVP----TATP-GYRVARIEHKLGQRASDTAQIVFEDMELTPDLLLGQEGEGLRIALSN 235 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A +V R + A+ YA R G L + +AD+A I A Sbjct: 236 LEGGRIGI----AAQAVGMARAAFEAALAYAGERETFGQKLTAHQAVAFRLADMATRIEA 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A D + +EAA A++ A +MA AV ++A++ GG GY+ + Sbjct: 292 ARLLVHNAARLRDAGQPCLKEAAMAKLFA-------SEMAEAVCSDAIQIHGGYGYLADY 344 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 345 PVERIYRDVRVCQIYEGTSD 364 >gi|114047887|ref|YP_738437.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7] gi|113889329|gb|ABI43380.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-7] Length = 389 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|308048737|ref|YP_003912303.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] gi|307630927|gb|ADN75229.1| acyl-CoA dehydrogenase domain protein [Ferrimonas balearica DSM 9799] Length = 385 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 27/303 (8%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 MVA T + W P + + E + LTE G+D A++ ++ ++ Sbjct: 96 MVASWGTETLKDQWCPSLVTGEKLAS-------------YCLTEPGAGSDAASLRTKAER 142 Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 D Y ++G K F+S + +++ G G + + G+ Y + ++K+G Sbjct: 143 DGDH-YVINGSKMFISGAGATELLVVMCRTGEDGPKGISAIAVPADAEGISYGKAEDKMG 201 Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEA 335 + T + F N LLG+ G MK L ++ A S+ + +L A Sbjct: 202 WNAQPTRLVTFENVRVPVANLLGE--EGQGFTFAMKGLDGGRINIAACSLGTAQAALERA 259 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 Y R G L ++ +AD+A ++ AA + RLA +F + E+ AY Sbjct: 260 QQYMTERKQFGKPLAAFQALQFKLADMATELVAARQM-VRLA-AFKLDSNDPEKTAYC-- 315 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + + V EA++ GG GYI E + RH R+ + IL G+ M L V Sbjct: 316 --AMAKRFATDVGFTVCNEALQIHGGYGYIREYPLERHVRDVRVHQILEGTNEIMRLIVA 373 Query: 456 NLL 458 L Sbjct: 374 RRL 376 >gi|240171199|ref|ZP_04749858.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium kansasii ATCC 12478] Length = 386 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 129/317 (40%), Gaps = 48/317 (15%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G + V + ++AL TT + W PK S E + + +TE G Sbjct: 93 GFGLHNDVVAPYLLAL-TTEEQKQRWLPKFCSGE-------------LITAIAMTEPGTG 138 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +D+ I ++ K D Y L+G K F+++ + SD I++AQ + G L+ + Sbjct: 139 SDLQGIKTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLVVERGM 197 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313 G R +KIG + T EL F++ F +L+ +L P E + Sbjct: 198 QGFERGRHLDKIGLDAQDTAELSFTDVKVPAENLLGEEGMGFIYLMQNL-----PQERIS 252 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I AIM+ +GM L + + Y R R G + + +A++A + + Sbjct: 253 I------AIMAAAGMEAVLEQTLQYVRERKAFGKPIGSFQNNRFVLAELATEATVVRIMV 306 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 E K E+AA A K++ + + ++ GG GY+ E +AR Sbjct: 307 DEFIALHLEGKLTVEQAAMA-------KWYSTEKQVYLNDRCLQLHGGYGYMREYPVARA 359 Query: 434 YRESPANSILLGSGNAM 450 Y ++ +I G+ M Sbjct: 360 YLDARVQTIYGGTTEIM 376 >gi|209518224|ref|ZP_03267051.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209501339|gb|EEA01368.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 376 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE + G+D +A+ + + D Y L+G K F++S + D I++A Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDA-YVLNGVKQFITSGKNGDVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP + G R+++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----ATPGYVVARVEDKLGQHSSDTAQIVFEACRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AEGDGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A + AA L + A+ D EAA A++ A + A + + A+ Sbjct: 281 FRLAEMATQLEAARQLIWHAASLKDAGLPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|126726340|ref|ZP_01742181.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] gi|126704203|gb|EBA03295.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] Length = 380 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 29/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + +DG + L+G K F+S SDA+I++A+ + Sbjct: 124 LTEPGSGSDAAALKTRADRTNDG-FNLTGTKAFISGGGYSDAYIVMARTGDAGPSGVSAM 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 L+EDGS GL + L++K+G RS T +++ N N+ T + E+ K Y Sbjct: 183 LVEDGS-EGLSFGGLEDKMGWRSQPTRQVQLDNC--------NIPTANLLGEEGKGFTYA 233 Query: 318 ---LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD +++S + A+A + Y R G + ++ +AD +++ AA Sbjct: 234 MKGLDGGRLNISACSLGAAQAAMDTTLAYMGERKAFGKTIDQFQALQFRLADNEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D + S +A+ MA K ++ V+ ++ GG GY+ + Sbjct: 294 RTFLRQAAWKLD---TGSPDASKFCAMA---KKHATEVGSRVVDSCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLLE 459 + + R+ + IL G+ M L V NLL+ Sbjct: 348 LEKLVRDLRVHQILEGTNEIMRLIVARNLLK 378 >gi|24666513|ref|NP_649069.2| CG3902 [Drosophila melanogaster] gi|7293851|gb|AAF49216.1| CG3902 [Drosophila melanogaster] gi|201066169|gb|ACH92494.1| FI09602p [Drosophila melanogaster] Length = 414 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T +L F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + ++ V LA+ I Y R G + + M+ IA + Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A KY+ ++A + ++ +GG Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR+ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410 >gi|83950248|ref|ZP_00958981.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] gi|83838147|gb|EAP77443.1| acyl-CoA dehydrogenase family protein [Roseovarius nubinhibens ISM] Length = 385 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 34/274 (12%) Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P+ + AI LTE G+D+A T + D Y L+G K W + ++ + + A Sbjct: 117 PLVRRGEAISAFALTEPASGSDVANSTMTATRDGDD-YILNGEKTWISNGGIASVYTLFA 175 Query: 248 QVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-EFSNTFGFLLGD 301 + E G F+VP G P +RL+ I AT+ E ++G Sbjct: 176 RSEDMPGAKGLSAFVVPA----GLPGFEVSERLET-IAPHPLATLRFTECRIPVSAMIGK 230 Query: 302 LNVSTGPVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 P E KI + LD A ++ R +L E++ R+RHV G L + ++ Sbjct: 231 ------PGEGFKIAMSVLDVFRSTVAAAALGFARRALDESLDRVRKRHVQGAPLAELQMV 284 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAE 414 + IAD+ALDI A+ L +R A + D +R + EAA A K + + A VI Sbjct: 285 QGHIADMALDIDASALLVYRAAWAKDSGAARVTREAAMA-------KLFSTEQAQKVIDR 337 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A++ GG G + R YRE A I G+ + Sbjct: 338 AVQLHGGDGVRSGAVVERLYREIRALRIYEGASD 371 >gi|150015212|ref|YP_001307466.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149901677|gb|ABR32510.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 379 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + +G Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + + + S G +L+NK+G R+++T EL N ++ N+ + + I + Sbjct: 181 ISAFIVEKSFPGFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGFGIAMK 237 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ + +A EA++Y + R G L ++ IA++ + I AA Sbjct: 238 TLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKIQAAKY 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + S +AA A++ A +A V +A++ GG GY +E + Sbjct: 298 LVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTKEYPVE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKICEIYEGT 365 >gi|113970657|ref|YP_734450.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4] gi|113885341|gb|ABI39393.1| isovaleryl-CoA dehydrogenase [Shewanella sp. MR-4] Length = 389 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGDH-YILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|315048815|ref|XP_003173782.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] gi|311341749|gb|EFR00952.1| isovaleryl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] Length = 431 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ ++ + + DG + L+G K W + Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG LN + +++L+ L+ ++S M+ L + Y R G Sbjct: 262 PHANVLGKLN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D++ S+ + + Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARHVDQSAVSSDGTQVKTQDCAGAILYAAER 375 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 376 ATECTLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414 >gi|326319041|ref|YP_004236713.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375877|gb|ADX48146.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 376 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE G+D +A+ + + D Y + G K F++S + ++ V Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRHGDE-YAIDGVKQFITSGRNGQVAIVIAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFG 296 R + F+VP G RL++K+G S+ T ++ F N G Sbjct: 170 TDRAAGKRGMSAFIVPT-----DTPGYVVARLEDKLGQHSSDTAQILFEGCRIPVENRIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ G +E +I I S M+ S V A+ YA+ R G + + Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDV----AVQYAKERESFGQPIFQHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD A + AA L + A D + +EAA A++ A +MA V + A+ Sbjct: 281 FRLADCATQLEAARQLIWHAAALRDAGRPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG G + + + R YR+ I G+ + Sbjct: 334 QTLGGYGVVNDFPVERIYRDVRVCQIYEGTSD 365 >gi|167524186|ref|XP_001746429.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775191|gb|EDQ88816.1| predicted protein [Monosiga brevicollis MX1] Length = 418 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D ++ ++ + + DG Y L+G K W ++P++D FI+ A Sbjct: 149 PRLATGELVGAFGLTEPDHGSDPGSMATKAKAV-DGGYLLNGSKTWITNAPIADVFIIWA 207 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 ++G + F+V R DGS GL +++ K+ R++ T ++ N F L + Sbjct: 208 NLDGDIRGFVVER---DGS-EGLTTPKIEGKLSLRASITGQIMLDNVFVPEENLFPTVKG 263 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 GP L++A ++ + AE A Y R G L +M++ Sbjct: 264 LKGP------FGCLNNARYGIAWGALGAAESCFEVARQYTLDRQQFGRPLAANQLMQKKF 317 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I R+ + R E + + + K C A + + + Sbjct: 318 ADMLTEINIGLQACLRV------GRLREEHGEFTPDLVSMIKRNSCGKALDIARMTRDML 371 Query: 420 GGSGYIEERSIARH 433 GG+G E+ + RH Sbjct: 372 GGNGISEDYHVLRH 385 >gi|16182654|gb|AAL13543.1| GH07925p [Drosophila melanogaster] Length = 414 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T +L F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + ++ V LA+ I Y R G + + M+ IA + Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A KY+ ++A + ++ +GG Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKCVDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR+ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410 >gi|117920119|ref|YP_869311.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3] gi|117612451|gb|ABK47905.1| isovaleryl-CoA dehydrogenase [Shewanella sp. ANA-3] Length = 389 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|225677560|gb|EEH15844.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 439 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 21/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVP 259 L+E G+D A+ ++ K S G Y ++G K W +S + FI+ A ++ G + Sbjct: 180 LSEPASGSDAFALQTKAVKTSSG-YKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 238 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 ++E G+P G + + K+G R+++T VE+ N G + + + Sbjct: 239 FIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLIGVEGQGYKYAINLLNEG 297 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I +++ G + A+ I RR+ G ++ + M+ +A +IAAA AL Sbjct: 298 RIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVAQAYTEIAAARAL 354 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 F A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 355 VFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGSAVEWMGGMGFVREGIAEK 407 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + LL+K Sbjct: 408 MFRDSKIGAIYEGTSNIQLQTIAKLLQK 435 >gi|325914364|ref|ZP_08176711.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325539372|gb|EGD11021.1| isovaleryl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 387 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D + L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G + V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGVRVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI + Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|229105934|ref|ZP_04236558.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] gi|228677508|gb|EEL31761.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-28] Length = 381 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDN-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + GL + ++K+G + TV+L F + ++ N+ + K+ + LD Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFED---MIVPAENLLGEEGQGFKVAMANLD 244 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + +AEA I YA+ R G + Q + +AD+A + AA L + Sbjct: 245 VGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVY 304 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A+ + +EA+ I K + K A V EA++ GG GY ++ + R + Sbjct: 305 RAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFF 357 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 358 RDAKITQIYEGT 369 >gi|332981892|ref|YP_004463333.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON] gi|332699570|gb|AEE96511.1| butyryl-CoA dehydrogenase [Mahella australiensis 50-1 BON] Length = 385 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 41/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D++ I + K D Y L+G K W + +D +++LA G Sbjct: 122 FALTEANAGSDVSGIQTMAVKDGD-YYILNGTKQWITNGGEADVYVVLAVTNRSKGSRGF 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306 + + GL + + + K+G R++AT E+ F++ GF++ N Sbjct: 181 SAFIVEKDTPGLSFGKKEKKLGIRASATREVIFTDCRIPKENILGKEGMGFIVAMKN--- 237 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 D + V +A+ A YA +R+ G + ++ +AD Sbjct: 238 -----------FDRTRPGIGAQAVGIAQGALDYAASYAHQRYQFGQPISSFQAIQHMLAD 286 Query: 362 IALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +A AA AL + A D AK S+E++ A++ A +A V +A++ +G Sbjct: 287 MATQTEAARALVYATARMIDAGAKDFSKESSMAKVFA-------SDVAMKVTTDAVQILG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ + + + R++ I G+ Sbjct: 340 GYGYMRDYPVEKMMRDAKITQIYEGT 365 >gi|313680955|ref|YP_004058694.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] gi|313153670|gb|ADR37521.1| acyl-CoA dehydrogenase domain-containing protein [Oceanithermus profundus DSM 14977] Length = 389 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 31/269 (11%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252 GLTE G+D AA++++ ++ +DG + L+G K F++ ++ +++ A+ EG+ Sbjct: 127 GLTEPGAGSDAAALSTRAEE-ADGGWVLNGTKQFITQGSVAGVYVINARTDPAPEGKPHR 185 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + F+ P G+P GL R ++K+G RS+ T +L F + L D V Sbjct: 186 GISTFVFP----AGTP-GLTIGRKEDKLGLRSSDTAQLIFEDLR--LPADALVGERGRGF 238 Query: 312 MKILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +L LD A +SV R +L A YA R G + + +A ++ D+ Sbjct: 239 YTVLRVLDGGRVGIAALSVGLGRAALEFAARYAGERRQFGRPIGRFEGVGFQLAQMSTDL 298 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A D + + AA A++ A ++A A++ +GG GYI+ Sbjct: 299 EAARMLYLKAAELKDAGRDYTLAAAQAKLFA-------SEVATRAADAAIQILGGYGYIK 351 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 + + R++R+ + +G G + +L ++ Sbjct: 352 DYPVERYWRD--VRLMRIGEGTSEILKLV 378 >gi|157374614|ref|YP_001473214.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3] gi|157316988|gb|ABV36086.1| butyryl-CoA dehydrogenase [Shewanella sediminis HAW-EB3] Length = 385 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 18/258 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G G + + Sbjct: 124 LTEAGAGSDAASLKTKAVRDGDE-YVISGAKMFISGAGATELLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKI 314 + G+ Y + ++K+G + T E+ F SN G + ++ +I Sbjct: 183 VVPADAAGITYGKAEDKMGWNAQPTREITFDKVRVPVSNLLGEEGQGFTFAMKGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ + +L A Y R G + ++ +AD+A ++ AA L Sbjct: 243 NI----ATCSIGTAQAALERATQYMNERKQFGKPIAAFQALQFKLADMATELVAARQL-V 297 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RLA +F + E AY + K + + V A++ GG GYI E + RH Sbjct: 298 RLA-AFKLDEKDPEATAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHV 352 Query: 435 RESPANSILLGSGNAMVL 452 R+ + IL G+ M L Sbjct: 353 RDVRVHQILEGTNEIMRL 370 >gi|300771433|ref|ZP_07081308.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300761422|gb|EFK58243.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 386 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A+ ++ K DG Y L+G K W ++P+ D ++ A Sbjct: 120 PKLATGELIGSFGLTEPNHGSDPGAMETRLSKDGDG-YILTGAKMWITNAPVCDLAVVWA 178 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + EG+V +V R + NG NK R++ T EL F + +L D++ Sbjct: 179 RDEEGKVKGIIVERGM-----NGFTTPETHNKWSLRASKTGELIFEDVRIPQANILPDVS 233 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358 GP L L+SA +S + A A+ Y+ R G + + ++ Sbjct: 234 SMKGP------LSCLNSARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKK 287 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A+ +I A LS+RL +E K+ ++ + A K MA + E+ + Sbjct: 288 LAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMA-------KRNNVNMALQIARESRQM 340 Query: 419 IGGSGYIEERSIARH 433 +G G + E I RH Sbjct: 341 LGAMGIVGEFPIMRH 355 >gi|85375042|ref|YP_459104.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter litoralis HTCC2594] gi|84788125|gb|ABC64307.1| acyl-CoA dehydrogenase, long-chain specific [Erythrobacter litoralis HTCC2594] Length = 387 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 26/263 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC 255 + +TE G+D+ +IT+ K +G Y ++G K ++S+ + FI++ E G Sbjct: 131 IAMTEPGVGSDLQSITTTALKDGNG-YRINGAKTYISNGQTADFIVVVAKTDPNERAKGI 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS-----TG 307 L+ LLE G + +KIG + T EL F N F +LG + G Sbjct: 190 SLM--LLETEGAEGFQRGKKLDKIGLDAADTSELFFDNVFVPAENVLGGVEGKGFYQLMG 247 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + +++I + +A +G+ +L + Y + R G + D + +AD+ A Sbjct: 248 ELAQERLVIAMGAA----TGIEKALEVTLEYVKERKAFGQTIWDFQNTQFVLADLK---A 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 TA + + AK E A A + KYW ++ V+ + ++ GG+GYI E Sbjct: 301 RGTAARVFVNDCI--AKLLKGELDVA--TAAMAKYWVTELQSEVVDKCLQLHGGAGYINE 356 Query: 428 RSIARHYRESPANSILLGSGNAM 450 IA+ YR++ I GS M Sbjct: 357 YPIAKMYRDARITRIFGGSNEVM 379 >gi|134298228|ref|YP_001111724.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050928|gb|ABO48899.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens MI-1] Length = 586 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 24/261 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D A ++ DG Y L+G K F++ + +D F++ A+++G + F+V Sbjct: 145 LTEPMAGSDALAAKTKAVLTEDGKYYVLNGEKIFITNASFADVFVVYAKIDGEKFTAFIV 204 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R +P G + K+G + ++T L F + LLG+ + G V IL Sbjct: 205 DR----DTP-GFSIGPEEKKLGIKGSSTCSLIFEDAKVPVENLLGE--IGKGHVIAFNIL 257 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + SV + +++ A YA R G + +++ +A +A A+ +L Sbjct: 258 NIGRYKLGLGSVGLSKSAISYATKYALERQQFGIPIAKFGMIQNKLAQMAAKTYASESLI 317 Query: 374 FRLANSFDEA-----KSRSEEAA---YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 +RL + +EA R AA YA + I+K C + V EA++ GG GY Sbjct: 318 YRLVGNIEEALHGKVDGREIGAAIEEYA-VECSISKVHCSESLAYVTDEAVQIYGGYGYT 376 Query: 426 EERSIARHYRESPANSILLGS 446 +E R YR++ N I G+ Sbjct: 377 QEFPAERMYRDARINRIFEGT 397 >gi|333024237|ref|ZP_08452301.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332744089|gb|EGJ74530.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 606 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 51/324 (15%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 SRE T PM + + L+E + G+ +A + ++ + DG Y L G+K ++S Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTYRLFGNKMWISGGD 209 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRS 283 + ++LA+ G + F+VP+ L DG + N + L +K+G R Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGARNDVVLAGLNHKMGYRG 269 Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329 L F G L+G+ N + M +I + L + + +G Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328 Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378 A+ YAR R + P ++R + + A AL+ Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 DE ++ E AA I+ PI K W + + A++ GG GY E + + Sbjct: 386 LVDEQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 YR++ N I G+ LD+L Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469 >gi|301118951|ref|XP_002907203.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] gi|262105715|gb|EEY63767.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] Length = 425 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 18/251 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS------SPMSDAFIMLAQV-- 249 G+ ++E GTD+ + + +K G Y L+G K +++ + + D F++ A+ Sbjct: 155 GMAMSEPSVGTDVLGMRTTAKKSDCGKFYLLNGTKMWITNGALDDTELGDTFLVYARTGN 214 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G+ L+E G QR+K+K G R++ T EL F N + + V Sbjct: 215 SGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAV 274 Query: 310 EDMKILIYLDS---AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M + ++ A MS+ R SL +YA+ R G L + +++ IA+ + Sbjct: 275 LCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGQPLNNFGQIQKNIAESYAEY 334 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A + + A+ ++ R+ K +C MA V A++ +GG GY+ Sbjct: 335 MAGRAYVY------NTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVG 388 Query: 427 ERSIARHYRES 437 E ++ R +R+S Sbjct: 389 EYNVERLWRDS 399 >gi|302530491|ref|ZP_07282833.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302439386|gb|EFL11202.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 381 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 33/259 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256 L+E G+D AA++++ ++S+ Y ++G K W + ++D + + + G C Sbjct: 127 LSETHAGSDAAALSTRA-RLSEDEYVVNGTKAWITHAGVADFYTTMVRTSDDGGHGISCL 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV D S GL + K+G + T +L F + L+G G +K Sbjct: 186 LV-----DSSTPGLSAAPRERKMGLTGSPTAQLLFEDARVPADRLIG------GKGSGLK 234 Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L L S + ++ V LA EA+ YA+ R G ++D M+ +AD+A + Sbjct: 235 IALASLSSGRLGIAACAVGLAQAALDEAVEYAKGRTQFGRPIVDFQGMEFLLADMAATVE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A A D A+ R + R + I K A V +A++ +GG+GY + Sbjct: 295 SAR------ATYLDAARRRDRGLDFQR-QSSIAKLVATDGAMKVTTDAVQVLGGAGYTRD 347 Query: 428 RSIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 348 FPVERYMREAKVPQIFEGT 366 >gi|229085825|ref|ZP_04218052.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-44] gi|228697492|gb|EEL50250.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-44] Length = 386 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 37/278 (13%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229 ++ W P++F+ D K + TE + G+ + I G + ++ Sbjct: 101 NRSWKPEMFAWFCDEVKKGAL------FNRAATEPKTGSPTRGGKPETLAIQKGDTWIIN 154 Query: 230 GHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 G K F + +P+ D FI+ A +EGR +G F++PR G+ + + + R A+ Sbjct: 155 GRKTFTTMAPVLDYFIISASIEGREEIGEFVIPR-----HEQGVLIEETWDSVAMRGTAS 209 Query: 287 VEL-----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 +L E N F D+ S + + L+++ + + ++ + + AIH+A+ Sbjct: 210 HDLVLQNVEIPNKF---FTDVKGSKSKPKGIGWLLHIPACYLGIA--QAARNYAIHFAKT 264 Query: 342 RHVSG-----GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 + G+L P ++R + ++ L++ A +++A +DE + + ++ A + Sbjct: 265 YQPNSLSHPIGLL---PSIRRLVGELELELMQARTFLYQIAKRYDEVEDK--QSLQAELA 319 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A KY A +V+ +AM +G E+ + R+Y Sbjct: 320 A--AKYIATNAAISVVDKAMRIVGAKSLSEKNPLHRYY 355 >gi|225686072|ref|YP_002734044.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457] gi|256262803|ref|ZP_05465335.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|225642177|gb|ACO02090.1| acyl-CoA dehydrogenase [Brucella melitensis ATCC 23457] gi|263092625|gb|EEZ16846.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326410399|gb|ADZ67463.1| acyl-CoA dehydrogenase [Brucella melitensis M28] gi|326553692|gb|ADZ88331.1| acyl-CoA dehydrogenase [Brucella melitensis M5-90] Length = 384 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LT+ G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTKPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T + F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 297 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|254459770|ref|ZP_05073186.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206676359|gb|EDZ40846.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 387 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLHAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGM 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + S G +K+G R + T EL F + F +LG+ + +++L Sbjct: 187 TAFLIEKSMTGFSTSNHFDKLGMRGSNTAELIFEDVQVPFENVLGEEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M L E + Y R G + + +M+ IAD+ + A Sbjct: 241 MSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKIADMYTKMNTA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D+ + ++AA + + + A V +A++ +GG+G++ + Sbjct: 301 RAYVYEVAKACDKGQVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGFLNDSP 353 Query: 430 IARHYRESPANSILLGS 446 +AR +R++ I G+ Sbjct: 354 VARIFRDAKLMEIGAGT 370 >gi|29833142|ref|NP_827776.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] gi|29610264|dbj|BAC74311.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] Length = 383 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 59/309 (19%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A +A + + W P + S Y +G GLTE G+D +T++ Sbjct: 95 AKTIAYWGSEEQKRQWLPGLTSGAY--------------VGCFGLTEPGTGSDAGNLTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + D Y ++G K F+++ +D ++ A+ G FLVP GL Sbjct: 141 AVRDGDD-YVVNGTKMFITNGTWADVVLLFARSTDAPGHKGVSAFLVPT-----DTPGLT 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAI 322 + + K+G R AT EL +L D+ V P M + L Sbjct: 195 RRPIHGKLGLRGQATAEL--------VLEDVRV---PASAMLAPEGKGFSVAMSALAKGR 243 Query: 323 MSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 MSV+ V +A+A + YA R G + +++ I+DIA+D+ AA L++R+A Sbjct: 244 MSVAAGCVGIAQAALDVAVKYATEREQFGKTIAHHQLVQELISDIAVDVDAARLLTWRVA 303 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 + D + + ++ A++ A + A A++ GG GYI+E + R++ Sbjct: 304 DLVDRGQPFATASSQAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDA 356 Query: 438 PANSILLGS 446 ++ G+ Sbjct: 357 RVMTLYEGT 365 >gi|83312698|ref|YP_422962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82947539|dbj|BAE52403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 378 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQ 248 PM + LTE G+D A+I ++ ++ D Y LSG K F+S+ + I+ A Sbjct: 111 PMARGEKLGCFCLTEPEAGSDAASIRTRARRDGDH-YVLSGAKQFISTAKNGQVAIVFAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + G F+VP G R+++K+G + T +L F S G Sbjct: 170 TDPQAGKRGISAFVVPT-----DTPGFTVVRVEDKLGQHLSDTCQLAFEDMRVPASRRLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E ++ I A SV R +L A+ YA+ R G + + + Sbjct: 225 EEGDGLKIALANLEGGRLGI----AAQSVGMARSALDHALAYAKERKQFGKPIFEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + A + A+ D +EA+ A++ A +MA V ++A+ Sbjct: 281 FRLADMATRVEVAEQMVLHAASLRDAGLPCLKEASMAKLFA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLADFPVERIYRDVRVCQIYEGTSD 365 >gi|308449818|ref|XP_003088087.1| hypothetical protein CRE_12446 [Caenorhabditis remanei] gi|308249638|gb|EFO93590.1| hypothetical protein CRE_12446 [Caenorhabditis remanei] Length = 593 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 126/316 (39%), Gaps = 47/316 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ + DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAEPNQDGTYNITGTKI 196 Query: 234 FLSS---PMSDAFIML-------AQVEGR-VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F++ ++D I L A R + F+VP+ L + G N +++ Sbjct: 197 FITGGDHDLADNIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSLGERNTAGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F GFL+G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDAAKGFLVGKENEGLAAMFVMMNYERLSMGIQGLGASEYAYQNAAQ 316 Query: 338 YA----RRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKS 385 YA + R +G ++P ++R + + + A+ A + + D K Sbjct: 317 YATDRVQGRSATGVKSPNKPADSILVHGDVRRMLLNARANNEASRAFAVYVGQQLDITKF 376 Query: 386 RSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A A+ ++ PI K + A +A GG GYI E + + R+ Sbjct: 377 STDPEAVAKANNRVALLTPIAKAYLTDTAFNAAIDAQMVFGGHGYIREWGMEQCVRDLRI 436 Query: 440 NSILLGSGNAMVLDVL 455 I G+ D++ Sbjct: 437 AQIYEGTNGVQSQDLI 452 >gi|254295049|ref|YP_003061072.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254043580|gb|ACT60375.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 377 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSP-MSDAFIMLAQV--EGRVG--C 255 LTE G+D A++ ++ K D Y L+G K F+S SD ++++A+ EG G Sbjct: 123 LTEPNSGSDAASLQTKAVLKGED--YVLNGSKIFISGGNFSDIYVVMARTSDEGARGIST 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGP 308 F+VP+ GL + + + K+G R+ T + F SN G + + Sbjct: 181 FVVPK-----DAPGLSFGKNEEKMGWRAQPTCMVNFDDCRIPASNLVGVIGEGFKYAMAG 235 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ ++ I A S+ G + +L AI Y + R G + D + +AD+ +D+ A Sbjct: 236 LDGGRLNI----ASASLGGAQEALDRAIAYTKDRKQFGKSISDFQATQFKLADMDIDLRA 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A+ + A D + A A K + + EA++ GG GY+ E Sbjct: 292 CRAMLYEAARKLDANAPDATPACAA------AKRFVTDKGFDIANEALQLHGGYGYLSEY 345 Query: 429 SIARHYRESPANSILLGSGNAM 450 I R R+ + IL G+ M Sbjct: 346 EIERIVRDLRVHKILEGTNEVM 367 >gi|229124846|ref|ZP_04254024.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] gi|228658637|gb|EEL14299.1| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201] Length = 381 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G V Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGVSA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|297196619|ref|ZP_06914017.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153309|gb|EFH32283.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 381 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 21/282 (7%) Query: 190 PMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P+ + AIG +TE GG+D A+T++ ++ D + L+G K F+S+ P++D F++ A Sbjct: 112 PLISSGEAIGAHAITESEGGSDAMAMTTRAERDGDH-FVLNGSKTFVSNGPVADVFVVYA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN-------TFGFLLG 300 + G V L D GL + K+G R++ EL F + G + G Sbjct: 171 RTRPDGGALGVSAFLVDRDTPGLTVGKPIKKMGLRTSPLSELYFDDCRIPRTRVLGRVGG 230 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 V ++ + L S +++ M+ L + YA+ R G + + I Sbjct: 231 GFIV----LDHVMKREVLFSFVVNAGEMQHRLDRCLEYAKTRRSFGKPIGSHQSIANKIV 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D + + A + A D+ ++ + + A A+++ + A A++ G Sbjct: 287 DTKIGLETARKWLYDTAQRLDDGENVTIDLAIAKLL-------TSQANVASSLAAVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 G GY+ E + + R + +I G+ + ++L GT Sbjct: 340 GHGYMSEYGLEQGVRNAVGGTIYSGTNEIQYNRIASMLGLGT 381 >gi|296140521|ref|YP_003647764.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296028655|gb|ADG79425.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 391 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 26/270 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T+ +K D Y ++G K F++S + +++ A G G + Sbjct: 126 LAITEPGGGSDVGHLTTTARKDGD-HYIVNGAKTFITSGVRADWVVTAVRTGGEGAAGIS 184 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKI 314 L + G P LK K+G ++ T EL F+ D+ V GP + Sbjct: 185 LLVIPKGLPGFEVSAPLK-KLGWHASDTAELSFT--------DVRVPAENLIGPEGSGFL 235 Query: 315 LI-------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 LI L A+ + S + L + + R+R G LI + ++ + ++ I Sbjct: 236 LIGAAFVTERLGLAVQAYSHAQRCLDLTLDWVRQRETFGEPLIKRQAVQNTVTEMRRRIE 295 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIM--APITKYWCCKMAPAVIAEAMECIGGSGYI 425 A S +A+ + A AA A ++ A K + V EA++ GG GY+ Sbjct: 296 VARVYSRHVADLYTAALESGGPAAAAELVPQACFAKNTAVECGEWVANEAVQLFGGHGYM 355 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVL 455 E ++RHYR+ + +G G +L L Sbjct: 356 SEYEVSRHYRD--VRILGIGGGTTQILTTL 383 >gi|116254744|ref|YP_770580.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115259392|emb|CAK10527.1| putative acyl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 375 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 30/263 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254 G LTE + G+D + + ++ ++ D Y L G K F++S + D I+ A + VG Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-YYVLDGSKQFITSGKNGDVIIVFAVTDPDVGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G R++ K+G S+ T ++ F++ G ++ Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLGAEGEGYRIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +++ + +AD+A+ Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERIAFGKPIVEHQAVAFRLADMAVR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L F A+ + EA+ A++ A +MA V ++A++ GG GY+ Sbjct: 290 IEAARQLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 342 Query: 426 EERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 343 ADYPVERIYRDVRICQIYEGTSD 365 >gi|126432713|ref|YP_001068404.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126232513|gb|ABN95913.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 588 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 41/304 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + L+E + G+ +A IT++ + DG Y L G K ++S + + Sbjct: 152 PMLAGRFSGTMALSETQAGSSLADITTRAEPRDDGTYRLFGSKMWISGAEHEITENIVNL 211 Query: 245 MLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFS- 292 +LA++ G + F+VP+ L EDGS N + L +K+G R L F Sbjct: 212 VLAKIPGGPPGTKGISLFVVPKYLVAEDGSVGERNDVVLAGLNHKMGQRGITNTVLNFGE 271 Query: 293 ---------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 G+L+G+ + + M L + +V+ +++ YAR R Sbjct: 272 GVFNPGGEPGAVGYLVGEPHRGITYMFRMMNEARLGVGMGAVALGYTGYLKSVKYARERP 331 Query: 344 VSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + P +KR + + A AL+ A D ++ Sbjct: 332 QGRPVTAKDPATPQVPIIEHADVKRMLLAQKSYVEGALALALYCARLVDLGDNQD----L 387 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 I+ P+ K W + + A++ GG GY E + +HYR++ N I G+ + Sbjct: 388 LDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQHYRDNRLNPIHEGTHGIQSV 447 Query: 453 DVLN 456 D+L Sbjct: 448 DLLG 451 >gi|89902828|ref|YP_525299.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89347565|gb|ABD71768.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 398 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ S+ K++ G Y LSG K W + Sbjct: 114 FGTEAQKQKYLPKLATGEWIGCFGLTEPDHGSDPGSMASRAHKVAGG-YKLSGAKMWISN 172 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ G+VG + + D GL + K+G R++ T E+ Sbjct: 173 SPIADVFVVWAKEVSESGKVGP--IRGFVLDKGMAGLSAPAIHGKVGLRASITGEIVMDG 230 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP LDSA ++ + AE A Y R Sbjct: 231 VFCPEENAFPEVRGLKGP------FTCLDSARYGIAWGTLGAAEDCWLRAHRYVMDRKQF 284 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA RL DE + E + I K C Sbjct: 285 GRPLAANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGTASVE-------ITSILKRNSC 337 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 338 GKALDIARLARDMMGGNGISDEFGVARH 365 >gi|126461936|ref|YP_001043050.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126103600|gb|ABN76278.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17029] Length = 385 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 39/298 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K +G Y L+G K W + P +D ++ A+ + G + L + S G + Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328 K+G R + T EL F N F +LG + +++L+ LD + +SG M Sbjct: 206 KVGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 L E + Y + R G + + +M+ +AD+ + + A A + A + D + Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +AA + + + A +A++ +GG+GY+ + ++R +R++ I G+ Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLMEIGAGT 370 >gi|254702633|ref|ZP_05164461.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] Length = 326 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G F++ +P++D F ++A+ V+G G Sbjct: 66 LTEPDAGSDAASLKTTAVRDGD-FYILNGTNRFITNAPIADIFTVMARTAADVKGADGIS 124 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 125 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 178 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +S LA+ + YA R G + D +++ +AD +I AA Sbjct: 179 MKVLDKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAA 238 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A K + +M V ++ GG+GY+ E + Sbjct: 239 KCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYA 291 Query: 430 IARHYRE 436 I R YR+ Sbjct: 292 IERFYRD 298 >gi|126666971|ref|ZP_01737947.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] gi|126628687|gb|EAZ99308.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] Length = 598 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 40/316 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE GTD+ I ++ + DG + ++G K F++ D ++LA++ G Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNDDGSFAVTGTKIFITWGEHDMAENIVHLVLAKLPGAPK 223 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + FLVP+ L +DGS N + ++ K+G + +AT + + G+L+G+ N Sbjct: 224 GPKGISMFLVPKFLVKDDGSLGDRNPVTCGSIEKKMGIKGSATCVMNYDAARGWLVGEEN 283 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350 + M L + + SL A YA+ R + IL+ Sbjct: 284 KGLNAMFTMMNYERLGVGVQGLGAAEASLQSAREYAKDRIQSRAPSGAQQPEKAADPILV 343 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA--------PITKY 402 P ++R + + + A S +A D AK + RI A P+ K Sbjct: 344 -HPDVRRMLLTMKGYVEGGRAFSTYVAQWLDIAKYADDSEQERRIHAEGMVSLLTPVAKA 402 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + V + +GG G+I E + R+ I G+ LD++ G+ Sbjct: 403 FLTDRGLDVCIIGQQVLGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGS 462 Query: 463 NLFEQLFSTLEQDLGS 478 +L+ QD+ + Sbjct: 463 Q--GKLYELFAQDVAA 476 >gi|118377002|ref|XP_001021683.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila] gi|89303449|gb|EAS01437.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 405 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 44/361 (12%) Query: 118 SIWD-RSFEPV-VRKQAHKIRAARLY------------LMAQLEAGHLMSPSVTSASMVA 163 S WD +S P+ V K+A K+ A +Y + A L L + V+++S ++ Sbjct: 58 SEWDQKSQSPIEVYKEAGKLGFACIYSSPDHGGSGMDRVSASLVFEALATACVSTSSYLS 117 Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKIS 222 ++ W + E P T LTE G+D A + + +K Sbjct: 118 ILNM----NHWIIDTYGNEKQKAEWLPQLSTVEKFSSYCLTEPGSGSDAANMKTFAKK-D 172 Query: 223 DGIYCLSGHKWFLSSP-MSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 G Y ++G K F+S+ SD ++++ + E C LVP GL + + + K+G Sbjct: 173 GGDYVINGSKCFISNAGFSDLYVVMCKTGENERSCILVP-----SDAKGLSFGKPEVKMG 227 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVS-----LAE 334 ++ T + F N + N+ + KI + LD ++++ + LA+ Sbjct: 228 WHASPTASITFDNV---RVPQSNLISTEGNGFKIAMTALDGGRVNIASTSLGSAAQCLAK 284 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYA 393 Y +R G + + IA++A D+ A+ L A D +++ A+ A Sbjct: 285 TKEYVGQRKQFGKSIDSFQNTQFRIAEMATDLIASRLLVREAAKKIDLNHPNKTLYASMA 344 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 +I A Y ++ + ++ GG GYI E +I RH R+ N IL G+ M L Sbjct: 345 KIQATEKCY-------NIVDQCLQLHGGYGYISEYNIERHLRDLRVNRILEGTNEIMRLI 397 Query: 454 V 454 V Sbjct: 398 V 398 >gi|24373462|ref|NP_717505.1| isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1] gi|24347753|gb|AAN54949.1|AE015633_1 isovaleryl-CoA dehydrogenase [Shewanella oneidensis MR-1] Length = 389 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|317406170|gb|EFV86424.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 375 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 30/282 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + G LTE + G+D +++ ++ + D Y L+G K F++S + +++ V Sbjct: 111 PLATGAAIGGFALTEPQAGSDASSLRTRAVRDGDH-YVLNGAKQFITSGRTGQLVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G+ G F+VP G R+++K+G + T ++ F + + LG Sbjct: 170 TDPQAGKRGISAFIVPT-----DTPGYQVVRVEDKLGQHLSDTCQIAFEDMRIPAAWRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A SV R + A YAR R G +++ + Sbjct: 225 EEGEGYKIALSNLEGGRIGI----ASQSVGMARAAFECARDYARDRQAFGKPIMEHQAVS 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I AA + A + + EA+ A++ A +MA V + A+ Sbjct: 281 FRLADMATQIHAARQMVLHAAALREAGRPALTEASMAKLFA-------SEMAEKVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + +GG GY+ + + R YR+ I G+ + L + L Sbjct: 334 QTLGGYGYLADFPVERIYRDVRVCQIYEGTSDIQRLVIARAL 375 >gi|167745829|ref|ZP_02417956.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662] gi|167654693|gb|EDR98822.1| hypothetical protein ANACAC_00523 [Anaerostipes caccae DSM 14662] Length = 632 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE+ G+D A T + Y L+G K F++ + +D +++ A +G + Sbjct: 123 FGLTEQNAGSD-AGGTETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + +K+G RS++T EL F++ + N+ E KI + Sbjct: 182 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMST 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ Y++ R G + Q + +AD+A + A L Sbjct: 239 LDGGRIGIAAQALGIAQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A+ + + E+A A K + + V+ +A++ GG+GY++ + R Sbjct: 299 VYSAADLKENHEPYGLESAMA-------KQYTSDICLEVVNDALQIFGGTGYLKGMDVER 351 Query: 433 HYRESPANSILLGS 446 YR++ +I G+ Sbjct: 352 AYRDAKICTIYEGT 365 >gi|262369782|ref|ZP_06063110.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] gi|262315850|gb|EEY96889.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] Length = 378 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE + G+D A+ + + + + L+G K F+++ ++ F + + G+ G C Sbjct: 123 LTEPQAGSDAGALECKAVREGEE-WVLNGTKQFITTGKHAQVALVFAVTDKGAGKKGISC 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 FLVP E G R++ K+G + T + N LLG ++ Sbjct: 182 FLVPTDTE-----GYIVSRIEEKMGQHCSDTATIVLENCRIPADHLLGAEGEGYKIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A SV R +L A+ YA R G ++ + +AD+A I A Sbjct: 237 LESGRIGI----AAQSVGMARAALDAAVEYANDRKAFGVEIVQHQAVAFRLADMATQIEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L F A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 293 ARQLIFHAAALKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 346 PVERIYRDVRVSQIYEGASD 365 >gi|169797090|ref|YP_001714883.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213156503|ref|YP_002318164.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215484553|ref|YP_002326788.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB307-0294] gi|260555617|ref|ZP_05827837.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|301594728|ref|ZP_07239736.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|332856328|ref|ZP_08436195.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332867824|ref|ZP_08437862.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|169150017|emb|CAM87911.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213055663|gb|ACJ40565.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213988121|gb|ACJ58420.1| Glutaryl-CoA dehydrogenase (GCD) [Acinetobacter baumannii AB307-0294] gi|260410528|gb|EEX03826.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|332727099|gb|EGJ58570.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332733724|gb|EGJ64879.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 406 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 122 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 180 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 181 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 238 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 239 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 292 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 293 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 345 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 346 GKALDIARMARDMMGGNGISDEFGVARH 373 >gi|319764945|ref|YP_004128882.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317119506|gb|ADV01995.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 382 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 17/250 (6%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVP 259 TE + G+D++ I ++ K+ G Y ++G K W +S ++D ++ A+ E G+ G L Sbjct: 124 TEAQSGSDVSGIRTRAVKVQGG-YRINGAKIWCTNSDLADFVLVAAKYEQGGKDGISLF- 181 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++E G+P G + ++KIG R + L + F + + N+ G + + Sbjct: 182 -IVERGTP-GFTVGKKEDKIGARGVPSCPLFLDDVF---VPEHNLVGGGFKAVMEAFNAS 236 Query: 320 SAIMSVSGMRVSLAEAIH---YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ G+ ++ H + + R G + D ++ +AD+A+ AA L +R Sbjct: 237 RPLIGARGVGLAQGAIDHASAFIKERRAFGQQICDFQGVRWMLADMAIQTEAARHLVYRA 296 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ D+A +E A +A + K + A V +A++ G +G E I R++R+ Sbjct: 297 ASLVDQAAPSAELAP----IAAMAKCFASDTAMKVATDAVQLFGAAGVSSEYPINRYFRD 352 Query: 437 SPANSILLGS 446 + I+ G+ Sbjct: 353 AKVLQIIEGT 362 >gi|293605089|ref|ZP_06687481.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292816492|gb|EFF75581.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 32/325 (9%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + PS T+ + M T V + W + P + + S LTE G+D Sbjct: 79 VDPSTTAFLTIHNMATWMVGQ-WGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266 A++T++ Q+ D Y L+G K F+S +D +++A+ G + F VP Sbjct: 134 ASLTTRAQRQGDD-YVLNGAKAFISGAGDTDLLVVMARTGGEGAGGISAFAVP-----AD 187 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325 G+ Y R + K+G S +T + F N + L V E KI + LD +++ Sbjct: 188 SAGISYGRKEEKMGWNSQSTRPITFENVRVPAVNLLGVEG---EGFKIAMKGLDGGRINI 244 Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 V A+ A RR++ L + ++ +AD+A + A+ + A Sbjct: 245 GTCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVASRQMVRLAACKL 304 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A A + K + M + +A + GG GY+++ + R R++ + Sbjct: 305 DAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLKDYPLERLVRDTRVH 358 Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464 IL G+ M V+ LLEKG ++ Sbjct: 359 QILEGTNEIMRVIIARQLLEKGADI 383 >gi|254510438|ref|ZP_05122505.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221534149|gb|EEE37137.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 385 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 31/288 (10%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + W PK+ S E IG L +TE G+D+ A+ + +K + Y L+ Sbjct: 111 KQKWLPKLASGEM--------------IGALAMTEPGTGSDVQAVKTTAEKDGNS-YRLN 155 Query: 230 GHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQRLKNKIGNRSNATV 287 G K F+++ S D I+ A+ + +G V + +E G R K+G + N T Sbjct: 156 GSKIFITNGQSADLVIVAAKTDKSLGAKGVSLIAVETDGAEGFRRGRNLKKLGMKGNDTA 215 Query: 288 ELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRR 342 EL F + LLG G + M+ L + L IM++ + ++AE + Y + R Sbjct: 216 ELFFEDVKVPMTNLLGS-EEGQGFYQLMRQLPWERLTIGIMALGAIDFAIAETVKYVQER 274 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G ++D + +A + L + ++ + E A + KY Sbjct: 275 KAFGQRVMD-------FQNTRFKLAECKTKAEVLRSFVNDCIGKLEAGELDAATASMVKY 327 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W ++ ++ E ++ GG G++ E IAR Y ++ I G+ M Sbjct: 328 WGSEVQNEIMHECLQLFGGYGFMMEYPIARLYADARVQMIYGGTNEVM 375 >gi|326508384|dbj|BAJ99459.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 628 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 43/294 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE + G+D+ + ++ + DG Y +SG K F+S M+D + +LA++ Sbjct: 182 LTEPQCGSDLGQVKTKAEPNGDGTYKISGTKIFISCGDHDMADNILHCVLARLPNAPAGT 241 Query: 253 --VGCFLVP--RLLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F VP ++ DGS N + R+++K+G ++T ++ F G L+G N Sbjct: 242 KGISLFAVPKRKVNADGSLGDFNNVGIDRIEDKMGCHGSSTCQINFEEAEGVLIGSENKG 301 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH----VSG--------GILIDQP 353 + + +A+ ++ +S +A+ YA+ R +SG +I+ P Sbjct: 302 LPHMFTFINTSRVGTAVQGMAAAELSYQKALAYAKERFSMRALSGTKNPEKAADFIINHP 361 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------MAPITK 401 + ++AIA+ + A LA+ EA+ + + A I M PI K Sbjct: 362 GVRKLLMFQKAIAEGGRSMIYECAF---LADEMFEAEVKGDTKKVAEIDDRLGFMTPILK 418 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + +M ++ GG GY+++ + + R+ S+ G+ LD+L Sbjct: 419 GYLTEMGLEAANAGIQVWGGHGYVKDNGMEQIVRDVRIASVWEGTTQIQGLDLL 472 >gi|239831285|ref|ZP_04679614.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239823552|gb|EEQ95120.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 592 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L DGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNADGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R I Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALSYAKERKQGRAIGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P + R A+ IA I + A + ++++ D A + S+ A + Sbjct: 339 QGMTPIIEHPDVSRMLLTMKALTQIARSITYSCAHAIDMSHATDGADQQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVASLGVQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|237740005|ref|ZP_04570486.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31] gi|229422022|gb|EEO37069.1| acyl-CoA dehydrogenase [Fusobacterium sp. 2_1_31] Length = 381 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 39/292 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGNEKQKQKYLPKMASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGA 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+++ + +++ A + G + ++E G+P G + + K+G R +AT EL Sbjct: 156 KIFITNAGYAHVYVVFAMTDKSKGLKGISAFIVEAGTP-GFSIGKKEMKLGIRGSATCEL 214 Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------------E 334 F N LLGD + KI A+M++ G R+ +A E Sbjct: 215 IFENCRIPKENLLGDKG------KGFKI------AMMTLDGGRIGIASQALGIAAGALEE 262 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 AI+YA+ R G L + IA++ + + AA L ++ A S +AA A+ Sbjct: 263 AINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAK 322 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A T A V +A++ GG GY E + R R++ I G+ Sbjct: 323 LFAAET-------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|320450391|ref|YP_004202487.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320150560|gb|ADW21938.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] Length = 577 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 40/269 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D A ++ +DG Y L+G K W ++ ++ F + A+V+G FLV Sbjct: 148 LTEPGSGSDALAAKTRATLSADGKHYVLNGVKQWISNAGFANLFTVFAKVDGEHFTAFLV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R GL + + K+G ++++T ++ +L D+ V PVE++ I Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I +V G + +L + YA+ RH G + +++ + ++A Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAKYAKERHQFGRPIGSFGLIQHKLGEMAT 311 Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417 I AA + +R DEA + EA A I A I K ++ V+ E ++ Sbjct: 312 RIYAAESAVYRTVGLIDEALQGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E I R YR++ N I G+ Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400 >gi|310791087|gb|EFQ26616.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella graminicola M1.001] Length = 424 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 30/278 (10%) Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 N +P QK TSV L ++E G+D+ ++ + DG + L+G K W Sbjct: 139 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRMTATAV-DGGHVLNGSKMWIT 196 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + P +D ++ A+ E G V + + G R +K+G R + T EL F + F Sbjct: 197 NGPDADVIVVYAKTEPDKGSKGVTAFIVETKAKGFSCARKLDKMGMRGSNTGELNFDSVF 256 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349 +LG +N G V + + L+ ++S M+ +L A+ + +R G + Sbjct: 257 VPKENVLGKVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFTHQRKQFGIPI 313 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMA 408 ++ +AD+ + A+ A ++ A + DE R+++ A A + + + A Sbjct: 314 AQNQFIQGKLADMYTKLQASRAYTYSTAKAVDEEGLIRTQDCAGAIL-------YAAERA 366 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++++ +GG GY+EE +R R++ I G+ Sbjct: 367 TECTLDSIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 404 >gi|242778135|ref|XP_002479178.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218722797|gb|EED22215.1| acyl-CoA dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 438 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 25/269 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K +DG Y ++G K W +S + FI+ A ++ G + Sbjct: 179 LSEPASGSDAFALQTKAEKTADG-YKINGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 237 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 + + G + + K+G R+++T VE+ +N G ++ G + + + Sbjct: 238 FIVEKDTPGFSIAKKEKKLGIRASSTCVLNFDDVEIPKANLLGEEGKGYKIAIGILNEGR 297 Query: 314 ILIYLDSAIMSVSGMRVSLAE--AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 I I ++G+ + E A + R G ++ + M+ IA +IAAA A Sbjct: 298 IGI-----AAQMTGLAIGAWENAAGYVWNDRKQFGQLIGNFQGMQHQIAQAYTEIAAARA 352 Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + A R +EA +M A + K + ++A V A+E +GG G++ E Sbjct: 353 LVYNAA--------RKKEAGQNFVMDAAMAKLYASQVAGRVAGSAVEWMGGMGFVREGIA 404 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLE 459 + +R+S +I G+ N + + L+ Sbjct: 405 EKMFRDSKIGAIYEGTSNIQLTTIAKQLQ 433 >gi|209520153|ref|ZP_03268926.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209499417|gb|EDZ99499.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 601 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 36/293 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE + G+ ++ +T+ +DG + + G+K F+S +S+ + +LA++ G Sbjct: 163 MALTEPQAGSSLSDLTTTATPNADGTWSIRGNKIFISGGDHELSENIVHLVLARIPGGPP 222 Query: 253 ----VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F VP R+ +DGS N + L +K+G R + L F G L+G Sbjct: 223 GVKGISLFTVPKFRVNDDGSLGERNDVALAGLIHKMGWRGTTSTMLSFGEHGECVGELIG 282 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349 + L + + +I + L + ++ G SL A + RH S L Sbjct: 283 EPHHGLAYMFHMMNEARIGVGLGAVMLGYRGYLASLDYARERPQGRHPSSKNPLDPQLPL 342 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403 I+ ++R + + A AL A DE + R+E ++ PI K W Sbjct: 343 IEHADVRRMLLAQKAYVEGAYALCLYAARLVDEQNTGESDDARAEAGLLLDLLTPIVKSW 402 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + A++ GG GY E + + YR++ N I G+ +D+L Sbjct: 403 PSQWCLEANSLAIQIHGGYGYTREYPVEQFYRDNRLNMIHEGTHGIQAIDLLG 455 >gi|307293387|ref|ZP_07573233.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306881453|gb|EFN12669.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 381 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 39/290 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ + L ++E G+D+ ++ + +K D Y Sbjct: 106 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEKRGD-RY 151 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++ +D ++ A+ EG G + L+E G Q++ +K+G R + Sbjct: 152 VLNGTKFWITNATYADTLVVYAKTGEGARG--ITAFLIEKGFKGFSIGQKI-DKVGMRGS 208 Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----I 336 T EL F + ++G LN G ++ LD +SG+++ + +A + Sbjct: 209 PTAELVFDDCEVPEENIMGPLNGGVGV-----LMSGLDYERAVLSGIQLGIMQACMDVVL 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R R G + +M+ +AD+ + + +A A + +A + D K+ +AA A ++ Sbjct: 264 PYVRERKQFGQPIGAFQLMQAKVADMYVALNSARAYVYAVAQACDRGKTTRFDAAGAILL 323 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + A V EA++ +GG+GY ++ + R+ R++ I G+ Sbjct: 324 A-------SENAMKVSLEAVQALGGAGYTKDWPVERYMRDAKLLDIGAGT 366 >gi|296168603|ref|ZP_06850407.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896666|gb|EFG76305.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 390 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 52/313 (16%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T K+W P++ + V LTE G+D +A++++ Sbjct: 93 AWMIDTFGTAEQRKEWVPRLAGMD-------------VIASYCLTEPGAGSDASALSTRA 139 Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274 + G Y L+G K F+S + SDA++++A+ G + ++E GS GL + Sbjct: 140 VREGPGKNADYVLTGVKQFISGAGASDAYVVMARTGGDGPRGISAFVVEKGSA-GLSFGA 198 Query: 275 LKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKILIY 317 + K+G + T ++ FG + LN Sbjct: 199 PEEKMGWHAQPTAQVILDGVRVPAEAMLGGADGEGAGFGIAMNGLNGGR----------- 247 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L+ A S+ G + + +A Y R R G L+D+P ++ +AD+A + + + +R A Sbjct: 248 LNIAACSLGGAQSAFDKAGAYVREREAFGKPLLDEPTVRFTLADMATGLETSRMMLWRAA 307 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 ++ D E + + K + V +A++ GG GY+ E + + R+ Sbjct: 308 DALDNDDPDKVE------LCAMGKRYVTDTCFDVADKALQLHGGYGYLREYGLEKIVRDL 361 Query: 438 PANSILLGSGNAM 450 + IL G+ M Sbjct: 362 RVHRILEGTNEIM 374 >gi|326318789|ref|YP_004236461.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375625|gb|ADX47894.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 601 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 74/407 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255 D+ + ++ + ++ +G Y ++G+K F+S+ D ++LA++ +G G Sbjct: 175 DLGLLRTKAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISL 234 Query: 256 FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ + G N + L++K+G NAT ++ G L+G P + Sbjct: 235 FVVPKYQVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQ------PHK 288 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG---------ILID 351 ++ + + +++A + V + L E A+ YA+ R +SG I++ Sbjct: 289 GLQAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVH 348 Query: 352 QPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 V K +A A+ A + L A+S + K R + ++ PI K + Sbjct: 349 PDVRKMLLTAKAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITD 408 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463 M+ GG G+I+E + + R++ N I G+ LD+L L G Sbjct: 409 NGHIATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 468 Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503 L F +L L ++ G + K I L D ++ + G F Sbjct: 469 LKKFGKLVGKLVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGF 515 >gi|163856823|ref|YP_001631121.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163260551|emb|CAP42853.1| acyl-CoA dehydrogenase [Bordetella petrii] Length = 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 32/325 (9%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + PS T+ + M T V + W + P + + S LTE G+D Sbjct: 79 VDPSTTAFLTIHNMATWMVGQ-WGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266 +++++ Q+ D Y L+G K F+S +D +++A+ G V F VP Sbjct: 134 GSLSTRAQRDGD-HYVLNGAKAFISGGGDTDLLVVMARTGGEGPGGVSAFAVP-----AD 187 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325 G+ Y R + K+G S +T + F N + N+ E KI + LD +++ Sbjct: 188 SAGISYGRKEEKMGWNSQSTRPITFENV---RVPAANMLGSEGEGFKIAMKGLDGGRINI 244 Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 V + A RR++ G L + ++ +AD+A + AA + RLA Sbjct: 245 GTCSVGAGQGALDAARRYMDERRQFGRRLAEFQALQFKLADMATHLVAARQM-VRLAACK 303 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 +A S A + K + M V +A + GG GY+ + + R R++ + Sbjct: 304 LDAGSPD-----AGTYCAMAKRFATDMGFQVCLDAQQIHGGYGYLRDYPLERLVRDTRVH 358 Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464 IL G+ M V+ LLEKG ++ Sbjct: 359 QILEGTNEIMRVIVARQLLEKGADI 383 >gi|220922160|ref|YP_002497461.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946766|gb|ACL57158.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 380 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 20/261 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + ++ D Y L+G K F+S + D ++++A+ G G + Sbjct: 125 LTEPGSGSDAAALRTTARREGDD-YVLNGTKQFISGAGAVDLYVVMART-GEAGPRGIST 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 L+ + GL + + K+G + T ++ F +N G ++ ++ + Sbjct: 183 LVVPATTPGLSFGPNERKMGWNAQPTRQVIFGECRVPVANRLGEEGTGFRIAMAGLDGGR 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I S+ G + +L +A+ Y R R G L + ++ +AD+A ++ AA + Sbjct: 243 LNI----GACSLGGAQSALDKALAYTRERRAFGKRLDEFQALQFRLADMATELEAARLMI 298 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A+S D R + A R A + K + + V EA++ GG GY+ E + + Sbjct: 299 YAAASSLD----RGDADATQR--AAMAKRFATDVGFKVANEALQLHGGYGYLSEYGVEKI 352 Query: 434 YRESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 353 VRDLRVHQILEGTNEIMRLIV 373 >gi|148254990|ref|YP_001239575.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146407163|gb|ABQ35669.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 381 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 39/369 (10%) Query: 116 HCSIWD--RSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165 H WD + F V +QA + +Y+ + +L+A + T V+ Sbjct: 27 HALRWDEEKHFPVDVMRQAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATGCPTVSAF 86 Query: 166 TTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 + W F E P + + LTE G+D AA+ ++ + D Sbjct: 87 ISIHNMASWMIDTFGTEAQRQAYLPKLCAMDLIASYCLTEPGAGSDAAALRTRAVRDGDD 146 Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+S + ++ G G + L+ D G+ + + K+G + Sbjct: 147 -YVLNGQKQFISGAGATDILVAMVRTGADGPGGISTLVIDAKTPGVSFGANERKMGWNAQ 205 Query: 285 ATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 T + F N GF + + G L+ A S+ G + +L Sbjct: 206 PTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGG---------RLNIAACSLGGAQSAL 256 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + + Y + R G L + ++ IAD+A+++ AA +R A + D + A Sbjct: 257 DKTLAYTKERKAFGKRLDEFQALQFRIADMAIELEAARTFVWRAAAALD------RKDAD 310 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A ++ + K + + V +A++ GG GY+ E I + R+ + IL G+ M L Sbjct: 311 ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIMRL 370 Query: 453 DVLNLLEKG 461 V L +G Sbjct: 371 IVSRKLIEG 379 >gi|256822431|ref|YP_003146394.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella koreensis DSM 16069] gi|256795970|gb|ACV26626.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM 16069] Length = 392 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D A++ ++ +K+ DG Y L+G+K W +SP++D FI+ Sbjct: 125 PKLATGEWVGCFGLTEPDSGSDPASMKTRAKKV-DGGYRLTGNKMWITNSPIADVFIVWG 183 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + EG + F++ + +E GL +++ K R++ T E+ N F ++ Sbjct: 184 KDDEGEIRGFILEKGME-----GLSAPKIEGKFALRASITGEIVMDNVFVPEENKFPEIK 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRA 358 GP + + Y +S + AE +A R++ ++P + ++ Sbjct: 239 GLKGPFGCLNVARY------GISWGALGAAEFCWHAARQYGLDRKQFNKPLASMQLFQKK 292 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ +I+ + R+ DE + + E M + K C A + A + Sbjct: 293 LADMQTEISLGLQGALRVGRLIDEKRFKPE-------MISLVKRNSCGKALDIARMARDM 345 Query: 419 IGGSGYIEERSIARH 433 GG+G +E + RH Sbjct: 346 HGGNGIADEFHVIRH 360 >gi|149378464|ref|ZP_01896153.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149357255|gb|EDM45788.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 386 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 86/388 (22%), Positives = 161/388 (41%), Gaps = 60/388 (15%) Query: 102 AWHALLRRSIHDGL------HCSIWDRSFEPVVRKQAHK--------IRAARLY------ 141 A H LR+++ D + HC W+ + E + K I+ Y Sbjct: 5 AEHEALRKTVRDFVEKEINPHCDEWEEAGEFPIHDIFKKLGNLGLLGIQKPEEYGGMGLD 64 Query: 142 ----LMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 L+A E G V A V M TP + + S E T AP + Sbjct: 65 YSYNLVAAEELGTAHCGGVPLAIGVQTDMCTPAISR-----FGSDELKRTFLAPAIAGDM 119 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---- 251 +G++E G+D+A + + ++ D Y ++G K W +SP +D +LA Sbjct: 120 VGCIGVSEVAAGSDVAGMKTTAKQDGDD-YVINGSKMWITNSPRADFICLLANTSDDKPH 178 Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 +VP + G+ + NK+G RS+ T ++ F + + +G + G Sbjct: 179 KNKSLIVVPM-----NTPGISFSPHLNKLGMRSSETAQIFFDDVRVPQRYRIG----AEG 229 Query: 308 PVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 M++L + + A + + + +++ I Y R R G LI+ V+ +A++ Sbjct: 230 TGFMMQMLQFQEERMWGAANVIKALELCISKTIEYCRERKTFGQPLINNQVIHFRLAELQ 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ A AL+++ E K ++ A+ A++ A ++ V ++ GG+G Sbjct: 290 TEVEALRALTYQACELHVEGKDVTKLASMAKLKAG-------RLGREVTDSCLQYWGGNG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451 Y+ E ++R +R+ SI G+ M+ Sbjct: 343 YMWENPLSRAFRDVRLVSIGGGADEIML 370 >gi|86136638|ref|ZP_01055217.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] gi|85827512|gb|EAQ47708.1| acyl-CoA dehydrogenase family protein [Roseobacter sp. MED193] Length = 386 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 30/287 (10%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F E P+ ++ AI LTE R G+D+A T + Y L+G K Sbjct: 99 AISLFGTEAQQAEWLPLTRSGKAISAFALTEPRSGSDVANSTMTA-TLDGEDYVLNGEKT 157 Query: 233 WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 W + ++D + + A+ EG + F+VP G P R + I AT Sbjct: 158 WISNGGIADVYTLFARTGEGPGAKGLSAFIVPA----GLPGFEVVAR-QQVIAPHPLAT- 211 Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRR 342 L+FS+ LLG G M +L S + + + G R +L EA+H R Sbjct: 212 -LQFSDCRIPKSALLG--QPGGGFKIAMSVLDVFRSTVAAAALGFARRALDEALHRVSTR 268 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITK 401 V G L D +++ IAD+ALD+ AA L +R A + D R + EAA A K Sbjct: 269 QVQGAPLFDLQMVQGHIADMALDVDAAALLVYRAAWAKDSGAMRVTREAAMA-------K 321 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A VI +A++ GG G + + YR+ A I G+ + Sbjct: 322 LFSTDQAQQVIDKAVQLHGGDGVRHGQKVEELYRDIRALRIYEGASD 368 >gi|291004058|ref|ZP_06562031.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 389 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 26/269 (9%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 M V + LTE GG+D+ A+ + + +DG Y ++G K W +S S ++ + Sbjct: 116 MATGEVRATMALTEPGGGSDLQAMRTVASRDADG-YVVNGSKTWITNSRRSQLIALMCKT 174 Query: 250 EGRV-----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + R G ++ L+E G GL R K+G + + EL F + + +LG Sbjct: 175 DPRAEPAHKGISIL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFDDYRASADAVLGG 230 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 + G + MK L L A ++ R +L +++ YA+ R G + + + Sbjct: 231 VE-GAGFAQMMKGLETGRLQVAARALGVARAALEDSLAYAQERESFGKPIWQHQSIGNYL 289 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A +AA L+ A +D + EA A++ A T A + +A+ Sbjct: 290 ADMATSFSAARQLTLHAAREYDAGRRVDMEAGMAKLFASET-------AMRIALDAVRIH 342 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448 GG GY E + R++R++P +++G G Sbjct: 343 GGYGYSTEFDVERYFRDAPL--MIVGEGT 369 >gi|305664397|ref|YP_003860684.1| AcdA [Maribacter sp. HTCC2170] gi|88708414|gb|EAR00650.1| AcdA [Maribacter sp. HTCC2170] Length = 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 43/294 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG GLTE G+D +++ K D + L+G K Sbjct: 115 WIPKLASGEW--------------IGAWGLTEHNTGSDAGGMSTTAVKDGDD-WVLNGAK 159 Query: 233 WFLSSPMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 F++ +S ++ G G + +E G+P G + ++K+G R++ T EL Sbjct: 160 NFITHGISGDIAVVITRTGEKGDSHGMTAFAIEKGTP-GFSSGKKEDKLGMRASETAELI 218 Query: 291 FSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 F+N + D N V G ++ MK+L D +S+ + + +++ + A ++ Sbjct: 219 FNNC---RVSDKNRLGKVGEGFIQSMKVL---DGGRISIGALSLGVSKGAYEAALKYSKE 272 Query: 347 GILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 I +P+ + +AD+ +I A+ L + A +E + ++ A ++ A Sbjct: 273 RIQFGKPISQFQGISFKLADMVTEIEASELLLHKAAFLKNEGRPMTKLGAMCKMYASEV- 331 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 C K+A EA++ GG GY ++ + + YR+S +I G G + V+ Sbjct: 332 --CVKVAN----EAVQIHGGYGYTKDFPVEKFYRDSKLCTI--GEGTTEIQKVV 377 >gi|110633080|ref|YP_673288.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110284064|gb|ABG62123.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 591 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 88/421 (20%), Positives = 171/421 (40%), Gaps = 65/421 (15%) Query: 102 AWHALLRRSIHDGLHC----SIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157 W AL RR G + + W P + + A L + + P++T Sbjct: 74 GWPALYRRWCEGGWNALAAPTRWGGQGLPTM------LSVAALEMWNSASMAFALGPTLT 127 Query: 158 SASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAIT 215 ++ AL T + + + K+ S E+ T + LTE + G+D+ A+ Sbjct: 128 MGAVEALERHATDALRQTYMEKLVSGEWMAT-------------MNLTEPQAGSDLGALR 174 Query: 216 SQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV------EGRVGCFLVPRLL-- 262 ++ ++ DG Y + G K F++ D ++LA++ + FLVP+ L Sbjct: 175 TRAERAGDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVG 234 Query: 263 EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVSTGPVED 311 EDGS N + +++K+G ++ T + + + G+L+G+ N + Sbjct: 235 EDGSLGPRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFT 294 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SG---GILIDQPVMKRAIADI 362 M L + V+ + +A+ YA+ R SG + P +KR + + Sbjct: 295 MMNNARLAVGMEGVAVAEAAYQKALAYAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSM 354 Query: 363 ALDIAAATALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + A+++ A++ D E + R+ A ++ P+ K + + ++ Sbjct: 355 KSLAEISRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAFATDGGVEAASLGIQ 414 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLLEKGTNLFEQLFSTLEQD 475 GG G+IEE A +YR+ I G+ +D++ L + G + S L +D Sbjct: 415 VHGGMGFIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRD 474 Query: 476 L 476 + Sbjct: 475 V 475 >gi|323456710|gb|EGB12576.1| hypothetical protein AURANDRAFT_58548 [Aureococcus anophagefferens] Length = 373 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 31/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ ++ +DG + L+G K W ++ + F++ A + +G C Sbjct: 114 LSEPGSGSDAFALATRAERKADGSWVLNGEKAWITNAEHAGVFLVFANADPSLGYKGITC 173 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F V DG GL R ++K+G R+++T + + +LGD V G + Sbjct: 174 FAV-----DGGAPGLTVGRKEDKLGIRASSTCPVVLEDVVVGPEAVLGD--VGAGYKYAI 226 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I L+ + + V LA+ + Y R G + D M+ A++A +IA Sbjct: 227 GI---LNEGRIGIGAQMVGLAQGCFDATMPYLFERSQFGSAVGDFQGMQMQYAEVATEIA 283 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L + A ++ +AA A++ A ++A ++ +E +GG G++++ Sbjct: 284 AARLLVYNAARKKEQGLPFIADAAMAKLKAS-------RVAELSASKCIEWMGGVGFMKD 336 Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454 + +R+ I G+ N +L + Sbjct: 337 YPAEKFFRDCKVGQIYEGTSNIQLLTI 363 >gi|195496409|ref|XP_002095682.1| GE22545 [Drosophila yakuba] gi|195496430|ref|XP_002095690.1| GE22549 [Drosophila yakuba] gi|194181783|gb|EDW95394.1| GE22545 [Drosophila yakuba] gi|194181791|gb|EDW95402.1| GE22549 [Drosophila yakuba] Length = 414 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T +L F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + ++ V LA+ I Y R G + + M+ IA + Sbjct: 269 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATV 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A KY+ ++A + ++ +GG Sbjct: 320 ATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAAIKCVDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR+ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410 >gi|84623396|ref|YP_450768.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577295|ref|YP_001914224.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv. oryzae PXO99A] gi|84367336|dbj|BAE68494.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521747|gb|ACD59692.1| acyl-CoA dehydrogenase family member 8 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 393 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 133 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 190 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 G+ Y R + K+G S T + N + N+ E K+ + LD Sbjct: 191 FAVPADAPGISYGRKEEKMGWNSQPTRGVTLENV---RIPAENLLGKEGEGFKMAMKALD 247 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 248 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 308 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 361 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 362 RDSRVHRILEGTNEVMRMIVARHLLNG 388 >gi|78223416|ref|YP_385163.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15] gi|78194671|gb|ABB32438.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens GS-15] Length = 615 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 77/369 (20%), Positives = 150/369 (40%), Gaps = 66/369 (17%) Query: 127 VVRKQAHKIR-AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDP 185 V++ AH++ AA M + H +A ++ L + + + K++ E+ Sbjct: 107 VIKNAAHEMFFAANFPFMCYVNLTH------DAAKLIELFGSEQQKSQYLHKMYGGEWLG 160 Query: 186 TNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---- 241 T + LTE G+D+ I + + +DG Y L G K F+++ SD Sbjct: 161 T-------------MALTEPAAGSDVGNIEFKATRNTDGTYSLVGQKIFITNGDSDVCEN 207 Query: 242 -AFIMLAQVEGR------VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVEL 289 ++LA++EG + F+VP+ DGS N + +++K+G +++ T + Sbjct: 208 TVHMVLARIEGDPAGTKGLSIFIVPKFKINSDGSLGEANDVKCIGIEHKMGIKASPTTTM 267 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM------RVSLAEAIHYAR 340 F G+LLG + +KI+ ++ +A GM VS A+ YA Sbjct: 268 SFGEKGCCTGYLLGKEQ------DGIKIMFHMMNASRLEVGMWGQGTCSVSYMHALRYAL 321 Query: 341 RRHVSGGI---------LIDQPVMKRAIADIALDIAAATALSFRLANSF------DEAKS 385 R I +I P ++R + + I A+ + + D + Sbjct: 322 ERRQGQSIADPDSGQVPIIHHPDIRRTLLMMKSYIQGMRAMLYYCGYAMDRMAVVDNEEE 381 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + + ++ P+ K + + + A++ GG GY +E + + R+S I G Sbjct: 382 KKKLQGIVDLLIPLCKAYPTEKGVEFASHAIQVYGGYGYTQEYPVEQFMRDSKVACIFEG 441 Query: 446 SGNAMVLDV 454 + +D+ Sbjct: 442 TTGIQAMDL 450 >gi|317124478|ref|YP_004098590.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315588566|gb|ADU47863.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 381 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 31/296 (10%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 V + T + W P I S E + I + +TE GG+D+AA+ + + Sbjct: 100 VVDLGTDEQKQRWLPGIASGE-------------LIIAIAMTEPSGGSDLAALKTTAVRD 146 Query: 222 SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 D + L+G K F+++ +D I+ A+ + G + + + +G R +K+G Sbjct: 147 GDD-WVLNGSKTFITNGYQADLVIVAARTDASKGAKGITLFMVERGMDGFVNGRKLDKVG 205 Query: 281 NRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 + T EL F N + D N G + M+ L + SA+ + + + L E Sbjct: 206 MDESDTAELFFDNV---RVPDENRLGEADLGFIAMMQRLPQERVGSAVANTAHAKAILEE 262 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 I YA+ R G + K IA++ I A + A S+ E A Sbjct: 263 TIQYAKDRKAFGQSIGTFQHNKFLIAELVTKIEVTEA----YVDDCVLAHSKKELTA--- 315 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I A K+W ++ V+ ++ GG G++ E +AR +R++ I GS M Sbjct: 316 IDAAKAKWWSSQVQNDVLDSCVQLHGGYGFMNEYRVARAWRDARVTKIWAGSNEIM 371 >gi|323344864|ref|ZP_08085088.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269] gi|323094134|gb|EFZ36711.1| acyl-CoA dehydrogenase [Prevotella oralis ATCC 33269] Length = 575 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 24/289 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRLGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + EA+ YA+ R G +I+ P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEALAYAKERAQFGQKIINFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFDE--------------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D A+ R E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDIYKALEDIQRDTKLIAEERDELKKYTRLADAFTPLAKGMNSEYASQAAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GGSG+I E R YR++ SI G+ V+ + + GT L Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457 >gi|229489982|ref|ZP_04383835.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229323083|gb|EEN88851.1| isobutyryl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 386 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 99/375 (26%), Positives = 167/375 (44%), Gaps = 45/375 (12%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P WD+ + P +LR++ G+ I+ R E V + ++ AAR++ +L Sbjct: 25 PNAVEWDQTKHFPV--DVLRKAASLGMG-GIYIR--EDVGGSELSRVDAARIF--EELAK 77 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207 G PS+ + + M T W F + P + +G LTE Sbjct: 78 G---DPSIAAYISIHNMVT------WMIDQFGNDEQRHKWVPGLCSMDQLGSYCLTEPGA 128 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CFLVPRL 261 G+D A ++++ + D Y L+G K F+S + SD ++++A+ G G F+VP+ Sbjct: 129 GSDAAGLSTKAVRDGDD-YILNGVKQFISGAGTSDVYVVMART-GSAGAKGISAFIVPK- 185 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 SP GL + + K+G + T ++ F + +LG+ +G MK L Sbjct: 186 ---DSP-GLSFGANEIKMGWNAQPTRQVIFEDVRVPAANMLGE--EGSGFRIAMKGLNGG 239 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L+ A SV G + +L +A+ Y R G LI+ ++ +AD+ ++ AA L +R Sbjct: 240 RLNIAACSVGGAQAALEKAVAYLVDRKAFGSALIESQALQFQLADMRTELEAARTLLWRA 299 Query: 377 ANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + D A E A A+ A T + V +A++ GG GY+ E I + R Sbjct: 300 AAALEDGAPDVVELCAMAKRFATDTGF-------DVANKALQLHGGYGYLAEYGIEKIVR 352 Query: 436 ESPANSILLGSGNAM 450 + + IL GS M Sbjct: 353 DLRVHQILEGSNEIM 367 >gi|187476740|ref|YP_784764.1| acyl-CoA dehydrogenase [Bordetella avium 197N] gi|115421326|emb|CAJ47831.1| acyl-CoA dehydrogenase [Bordetella avium 197N] Length = 387 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA++ + + SDG + L+GHK W + ++D + + A+ G G + Sbjct: 127 FALSEPEAGSDVAALSCRAEAQSDG-FVLNGHKTWISNGGLADFYCVFART-GEPGSRGI 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIY 317 + D GL + + + A + + LLGDLN + Sbjct: 185 SAFIVDADTPGLVIEERIDVMSPHPLALLRFDRCRVPASQLLGDLNQGFKLAMRTLDVFR 244 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 + A ++ R +LAE + YA +R + G L D + + A + A +I + L++R A Sbjct: 245 ISVAAAALGFARRALAEGLDYASQRKMFGQTLADFQLTQAAFGEAATEIDQSALLTYRAA 304 Query: 378 NSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 D +S + E A A++ A + A VI ++ GG G + + R YR+ Sbjct: 305 WVRDVPQQSSTMETAMAKMAA-------TESAQQVIDRVLQMFGGRGVVRGNVLERLYRD 357 >gi|33598606|ref|NP_886249.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33574735|emb|CAE39394.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 382 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 31/259 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255 LTE G+D A+ + + D Y L+G K F++ +P++ F ++A+ E R + C Sbjct: 124 LTEPDAGSDAMALRTSAVRDGDH-YVLNGTKRFITNAPVAGLFSVMARTAPERRADSISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV E G+P G+ + K+G T ++ F N LLG TG M Sbjct: 183 FLV----EAGTP-GVTLGKPDKKMGQAGALTCDVVFDNCRVPAEALLGGKE-GTGFRTSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + ++ + V +AE A+ YA R G + + +++ IAD ++ Sbjct: 237 RVL---DKGRLHIAALCVGIAERLVRDAVRYALERKQFGQPIAEFQLVQAMIADSQTELY 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA ++ A D ++ + EA +K + +M V A++ GG+GYI E Sbjct: 294 AARSMVLDAARKRDLGQNVTMEAV-------CSKLYATEMVGRVADRAVQIHGGAGYISE 346 Query: 428 RSIARHYRESPANSILLGS 446 ++ R YR+ I G+ Sbjct: 347 YAVERFYRDVRLFRIFEGT 365 >gi|145225587|ref|YP_001136265.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145218073|gb|ABP47477.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 387 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 36/303 (11%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A MV T K W PK+ S + LTE G+D +A+ ++ Sbjct: 95 AWMVDSFGTEEQRKLWVPKLASMD-------------AIASYCLTEPGAGSDASALRTKA 141 Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDGSPNGLCYQ 273 + D Y L G K F+S + SD +I++A+ +G G F+VP+ GL + Sbjct: 142 VRSGD-EYVLDGVKQFISGAGTSDVYIVMARTGSDGPKGISAFVVPK-----DTPGLSFG 195 Query: 274 RLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 + K+G + T ++ L G TG MK L ++ A S+ G Sbjct: 196 TDEVKMGWNAQPTRQVILEGARVPADALLGGPDGEGTGFGIAMKGLNGGRINIAACSLGG 255 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + + + + Y R GG L+D+P ++ +AD+A + + AL +R A + D Sbjct: 256 AQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLADMATGLETSRALLWRAATALDNDHPDR 315 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + + K + V +A++ GG GY+ E + + R+ + IL G+ Sbjct: 316 VE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRVHRILEGTN 369 Query: 448 NAM 450 M Sbjct: 370 EIM 372 >gi|109898235|ref|YP_661490.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109700516|gb|ABG40436.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 600 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 42/300 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ + ++ K DG Y L+G K F+S+ D I++A++ EG Sbjct: 164 LTEPHCGSDLGMLKTKAVKNDDGSYNLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGT 223 Query: 253 VGC--FLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNTFGFLLG--- 300 G F+VP+ + SP+G R +++K+G + +AT + F G+L+G Sbjct: 224 KGISLFVVPKF--NVSPDGENVDRNAVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTEN 281 Query: 301 -DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILID 351 LN + +I L+ S + + +LA A + R + G +I Sbjct: 282 RGLNCMFTFMNSARIGTGLEGLASSETAFQGALAYAKDRLQFRSMKGVQNPDGPADPIIV 341 Query: 352 QPVMKR--------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 P ++R A + AL I A + L S DEA + EA A + PI K + Sbjct: 342 HPDVRRMLLTQKAFAEGNRALAIYAMKLVDITLY-SKDEAAKQVSEAKLA-FLTPIVKAF 399 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + A + M+ GG G+I+E + + R++ ++ G+ +D+L G+N Sbjct: 400 LTETAQESTSYGMQVFGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLARKVVGSN 459 >gi|108805257|ref|YP_645194.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108766500|gb|ABG05382.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 398 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 31/277 (11%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +AL+ + + W P PM + LTE G+D+ + + ++ Sbjct: 113 IALLGSEEQRQRWLP-------------PMARMEKIGAFALTEPGHGSDVVMLETSAERD 159 Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 DG + L+G K W + +D ++ A+ E G V FLV + E G +R++ K Sbjct: 160 GDG-WVLNGRKRWIGNGTFADVVVVWARDEEDGEVKGFLVEKGTE-----GFTAERIEGK 213 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI-MSVSGMRVSLAE-AI 336 IGNRS+ ++ N L + + +L + G ++ E A+ Sbjct: 214 IGNRSSWQADITLENVRVPAENKLENANSFADTSTVLTNTRYGVAWQALGHALACYEAAV 273 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA+ R + G +++ +A + D+ + FRL+ D+ + A+ A+++ Sbjct: 274 QYAKEREIFGIPQASFQLIQYRLAGMLADLTQMQLVCFRLSQLLDKGEMTHGRASLAKLV 333 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + + AEA + +GG+G + E + +H Sbjct: 334 -------TARQGKRICAEARDILGGNGVLLEYLVGKH 363 >gi|324998483|ref|ZP_08119595.1| acyl CoA dehydrogenase [Pseudonocardia sp. P1] Length = 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 15/243 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LG+TE G+D+ AIT++ ++ D Y +SG K F++S F+ A G G V Sbjct: 127 LGVTEPGTGSDVGAITTRARRDGDD-YVVSGAKTFITSGTRADFVTTAVRTGGPGHRGVS 185 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ + G K+G + T EL F L+GD TG V+ M+ Sbjct: 186 LLIIESDRPGFAVTSKLKKMGWLCSDTAELSFDEVRVPLRNLIGDEG--TGFVQIMQRFE 243 Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A + + SL A +AR R G L + V++ +AD+A ++A A Sbjct: 244 SERLLMAAQAAATAERSLHLARQWARDRVTFGEPLAHRQVIRHKLADMAREVAVARTFVR 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + E EE A A+ A +V+ A++ GG GY+ + + RHY Sbjct: 304 DVAVRWSEEGHTPEEVAMAKNAA-------VAACDSVVNAAVQIHGGMGYMRDSEVERHY 356 Query: 435 RES 437 R+S Sbjct: 357 RDS 359 >gi|112005099|gb|ABH85388.1| isovaleryl-CoA dehydrogenase [Beta vulgaris] Length = 409 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 16/253 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + ++ DG Y L+G+K W + P + I+ + + V + Sbjct: 151 LAMSEPNSGSDVVSMKCRADRV-DGGYMLNGNKMWCTNGPTAQTLIVYTKTDMAVHTKGI 209 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P Q+L +K+G R + T EL F N F L V M + Sbjct: 210 TAFIIEKGFPGFSTAQKL-DKLGMRGSDTCELVFENCFVPQDNVLGEEGKGVYVMMSGLD 268 Query: 318 LDSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L+ +++ SG M+ L + Y R+R G + ++ +AD+ + ++ + Sbjct: 269 LERLVLA-SGPLGIMQACLDVVLPYVRQREQFGRPIGQFQFIQGKVADMYTSLQSSRSYV 327 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A D + ++ A + A + A V +A++C+GG GY+ E S R Sbjct: 328 YSVARDCDSGQVDPKDCAGVILCA-------AERATQVALQAIQCLGGHGYVNEYSTGRL 380 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 381 LRDAKLYEIGAGT 393 >gi|317470554|ref|ZP_07929942.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316902069|gb|EFV23995.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 632 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE+ G+D A T + Y L+G K F+++ +D +++ A +G + Sbjct: 123 FGLTEQNAGSD-AGGTETTAVLEGDHYVLNGGKIFITNADKADTYVVFAVTTPDIGTHGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + +K+G RS++T EL F++ + N+ E KI + Sbjct: 182 SAFIVEKGWEGFTFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKEGEGFKIAMST 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ Y++ R G + Q + +AD+A + A L Sbjct: 239 LDGGRIGIAAQALGIAQGAYENALEYSKEREQFGRPICQQQAIAFKLADMATKLRTARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A+ + + E+A A K + + V+ +A++ GG+GY++ + R Sbjct: 299 VYSAADLKENHEPYGLESAMA-------KQYTSDICLEVVNDALQIFGGTGYLKGMDVER 351 Query: 433 HYRESPANSILLGS 446 YR++ +I G+ Sbjct: 352 AYRDAKICTIYEGT 365 >gi|218777918|ref|YP_002429236.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759302|gb|ACL01768.1| Short-chain specific acyl-CoA dehydrogenase [Desulfatibacillum alkenivorans AK-01] Length = 387 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 19/258 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256 G G+TE G+D+ AI ++ + D Y L+G K W ++ +D I+ A + Sbjct: 123 GFGITEPNAGSDVLAIETEATDMGDH-YVLNGSKTWISNAHQADVIIIYAYTDKSAKTKG 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L ++E + NG+ L NK+G+ S+ T EL F NT + N+ P + +I+ Sbjct: 182 LSAFIVEPRNFNGIKTTDL-NKMGSHSSPTGELFFDNT---RVPKENLLGKPGDGARIVF 237 Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L +A +V + L A Y +R G + + + IA + +I AA Sbjct: 238 SSLANTRLSAAAGAVGCAQACLDIATKYITKREQFGKSVGTFQMNQDLIAQMTTEIEAAR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ + D+ + A KY+ + A M +G GY E + Sbjct: 298 LLVYKASWQKDQGMENNGMAV------AQAKYFAGETAMKCANYGMRLMGAYGYSTEYPL 351 Query: 431 ARHYRESPANSILLGSGN 448 AR+YR+ P ++ GS N Sbjct: 352 ARYYRDIPTYVLVEGSAN 369 >gi|83718837|ref|YP_441936.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|257138109|ref|ZP_05586371.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|83652662|gb|ABC36725.1| glutaryl-CoA dehydrogenase [Burkholderia thailandensis E264] Length = 395 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 125 PKLATGEWIGCFGLTEPNHGSDPGSMVTRAKKVPGG-YALSGSKMWITNSPIADVFVVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +++ + +LE G GL + K+G R++ T E+ F +L ++ Sbjct: 184 KLDEDGRDEIRGFILEKGW-KGLSAPAIHGKVGLRASITGEIVLDEVFVPEENILPNVKG 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ + R++V G L ++++ + Sbjct: 243 LRGP------FTCLNSARYGIAWGALGAAESCWHTARQYVLDRKQFGRPLAANQLIQKKL 296 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C A + A + + Sbjct: 297 ADMQTEITLGLQGVLRLGRMKDECTAAVE-------ITSIMKRNSCGKALDIARLARDML 349 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 350 GGNGISDEFGVARH 363 >gi|304320145|ref|YP_003853788.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] gi|303299048|gb|ADM08647.1| putative acyl-CoA dehydrogenase [Parvularcula bermudensis HTCC2503] Length = 591 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 L+E G+ +A IT++ DG Y + G K ++S +S+ I +LA++ G Sbjct: 159 LSEPHAGSSLADITTKAIPQEDGSYKIIGRKMWISGGDHELSENIIHLLLAKIPGGPEGI 218 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD- 301 + F+VP+ D G N + L +K+G + L F G L+G+ Sbjct: 219 KGISLFIVPKKRVDDEGGVGERNDVALAGLNHKMGYKGITNCALNFGENEACIGELVGEP 278 Query: 302 ---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGGI-LID 351 L + + ++ + L +A + SG + SLA A + RH SG I +I+ Sbjct: 279 HNGLRYMFQMMNEARVAVGLGAAALGQSGYQASLAYAKERPQGRHPDEKTPGSGQIPIIE 338 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----EAAYARIMAPITKYWCCKM 407 ++R + + A AL A D + E +A + PI K W + Sbjct: 339 HADIRRLLLAQKAAVEPALALGLFCAILLDRIELGEETAETDALLLDFLTPIAKSWPSEF 398 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A++ +GG+GY ++ + R YR++ N I G+ D+L Sbjct: 399 CLEANKHAIQVLGGAGYTKDYPVERLYRDNRLNPIHEGTHGIQGQDLLG 447 >gi|295099579|emb|CBK88668.1| butyryl-CoA dehydrogenase [Eubacterium cylindroides T2-87] Length = 379 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ ++ +I+ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGTKIFITNAGEAEVYIIFAMTDKSKGTRG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + ++E G+P G + + K+G R +AT EL F+N + N+ + KI + Sbjct: 181 ISAFIVEKGTP-GFTFGLHEKKLGIRGSATSELIFNNV---RIPKENLLGKEGQGFKIAM 236 Query: 317 Y-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ + +A E I Y + R G + + +AD+ + AA Sbjct: 237 QTLDGGRIGIAAQALGIAQGAIDEVIPYVKARKQFGRPIAKFQNTQFQLADMQTKVDAAR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + A + +E + + AA A++ A ++A V +A++ +GG GY + + Sbjct: 297 WLVYSAAMAKEEGRPYTTLAAEAKLFA-------AEVAMEVTTKAIQLMGGYGYTRDLPV 349 Query: 431 ARHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 350 ERMFRDAKITEIYEGT 365 >gi|325915156|ref|ZP_08177482.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325538678|gb|EGD10348.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 597 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 48/296 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQV 249 LTE GTD+ + ++ + +DG Y ++G K F+++ ++D + L A Sbjct: 166 LTEPHCGTDLGLLKTRAESNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGA 225 Query: 250 EGRVGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +G + F+ P+ G N L +++K+G + + T + F G+L+G Sbjct: 226 KG-ISLFVTPKFKVGRDGVVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQ--- 281 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARR----RHVSGGILIDQPV 354 P + ++ + +++A +SV + L+E A+ Y R R +SG D+P Sbjct: 282 ---PHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRERLQSRSLSGAKFPDKPA 338 Query: 355 --------MKRAIADIALDIAAATALSFRLANSFD------EAKSRSEEAAYARIMAPIT 400 ++R + I + L+ A+ D + R++ + PI+ Sbjct: 339 DPIIVHPDVRRMLLTIKSLTEGSRLLALHAASLVDVSHRGVSEQERADAETLVSFLTPIS 398 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K + + A++C GG GYI E + + R++ +I G+ LD++ Sbjct: 399 KACQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIG 454 >gi|217969167|ref|YP_002354401.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gi|217506494|gb|ACK53505.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 377 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 36/263 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG----- 254 LTE G+D +AI + + DG + L+G K F+++ +D I+ A + G Sbjct: 123 LTEPHVGSDASAIRTSA--VRDGNEWVLNGVKQFITTGKHADVAIVFAVTDKAAGKKGIT 180 Query: 255 CFLVPRLLEDGSPNGLCYQ--RLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVS 305 CFLVP N YQ R++ K+G +++ T ++ F + G ++ Sbjct: 181 CFLVP-------ANAPGYQVGRIEEKMGQKASDTTQILFEDCRIPADSVVGKEGEGYRIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A + R +L A+ YA+ R G + + + +AD+A Sbjct: 234 LSNLEAGRIGI----AAQCLGMARAALEAAVKYAQERESFGKPIFEHQAVNFRLADMATQ 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L + A+ D + +EA+ A++ A +MA V ++A++ GG GY+ Sbjct: 290 LEAARQLVWHAASLKDAGRPCLKEASMAKLFAS-------EMAERVCSDAIQVHGGYGYV 342 Query: 426 EERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 343 TDFPVERIYRDVRVCQIYEGASD 365 >gi|193077432|gb|ABO12244.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 607 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 71/366 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283 Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + G L+G+ + M +I + L +A + +G A+ YA+ R V G Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388 LI ++R + ++ A AL A +S ++A+ R + Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRDQ 398 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458 Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 LD+L L +G + L E++ +T+E K L+D + L R Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIEL------AKAEPSLKDHADQLDQKWQLIR 512 Query: 503 FLTEKI 508 +TEK+ Sbjct: 513 NVTEKL 518 >gi|146306407|ref|YP_001186872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145574608|gb|ABP84140.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 387 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 33/278 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV--EGRVG--CF 256 LTE G+D A + ++ ++ D Y + G K F+S S D I++A+ +G G CF Sbjct: 124 LTEPDAGSDAANLRTRARRDGDD-YVIDGSKCFISGAGSTDVLIVMARTGEDGAKGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 LVP G+ Y R ++K+G ++ T + F S+ G G V Sbjct: 183 LVP-----ADAPGVRYGRNEDKMGWKAQPTRTIAFDGVRIPASHRIG------PEGEGFV 231 Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 MK L L+ A S+ + +L +++ Y R G L + ++ +AD+ D+ Sbjct: 232 YAMKGLDGGRLNIASCSLGAAQAALQQSLRYVEERKQFGKPLSEFQALQFKLADMLTDLT 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + A+ D A + + K + +V EA++ GG GY+ + Sbjct: 292 ASRQMVRLAAHKLDRGHGE------ASLYCAMAKRFATDHCFSVCNEALQLHGGYGYLND 345 Query: 428 RSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 + R R++ + IL G+ M V+ LL++G L Sbjct: 346 YPLERWVRDARVHQILEGTNEIMRVIVARRLLQQGGML 383 >gi|33591541|ref|NP_879185.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33571183|emb|CAE40687.1| putative acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332380941|gb|AEE65788.1| putative acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 389 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 21/279 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D+AA+ + + DG Y L+G K W + ++D + + A+ Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181 Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303 G + + D G+P +R+ + + A + S G Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ M + I+ S + + G R +L E + AR R + G L D + + A+ D+ Sbjct: 242 LAM-----MTLDIFRASVVAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296 Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A + A+ L++R A D + R+ EAA A++ A + A AVI A++ GG Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +G + ++ R YRE A I G+ L + L K Sbjct: 350 AGVVAGTTVERLYREIRALHIYEGATEVQKLIIARELLK 388 >gi|99082079|ref|YP_614233.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040] gi|99038359|gb|ABF64971.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040] Length = 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%) Query: 175 APKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F + P ++ AI LTE + G+D+A T + D Y L+G K Sbjct: 98 AISLFGTDAQKAEWLPKTRSGAAIAAFALTEPQSGSDVANSTMTAVRDGDD-YVLNGEKT 156 Query: 233 WFLSSPMSDAFIMLAQV------EGRVGCFLVPRL--------LEDGSPNGLCYQRLKNK 278 W + ++D + + A+ +G + P L LE +P+ L R + Sbjct: 157 WISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLATLRFSD- 215 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAI 336 V + S G ++ M +L S + + + G R +L EA+ Sbjct: 216 --------VRIPASAMIGAPGQGFRIA------MSVLDVFRSTVAAAALGFARRALDEAL 261 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARI 395 RHV G L D +++ IAD+ALD+ AA L +R A + D +R + EAA A Sbjct: 262 WRVTERHVQGAPLFDLQMVQGHIADMALDVDAAALLVYRAAWTKDSGAARVTREAAMA-- 319 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + + A VI +A++ GG G + + YRE A I G+ + Sbjct: 320 -----KLFSTEAAQVVIDKAVQLFGGEGVRSGAMVEKLYREIRALRIYEGASD 367 >gi|329122109|ref|ZP_08250717.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965] gi|327466916|gb|EGF12432.1| acyl-CoA dehydrogenase [Dialister micraerophilus DSM 19965] Length = 378 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 19/265 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LTE G+D A+ QK+ DG Y L+G K F+++ +++ ++ G + Sbjct: 121 FALTEPGAGSDAGAVACHAQKV-DGGYILNGTKCFITNGSIAEKIVVFTNTRKTGGIRGL 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVED 311 + D + G+ + ++K+G R++ T E+ F + F LG ++ +E Sbjct: 180 TAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFVPESSRLGREGMGFKIAMKTLEK 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ +SV + SL A+ YA +R G + +++ IAD+ + +A A Sbjct: 240 SRPVV----GALSVGIAQASLESAVRYAHQRKQFGSKISSFEMVQDMIADMVIKTESARA 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + D + I +P+ K + +A V +++ +GG+GY +E Sbjct: 296 LVQKACWMLD------NDMPSKGIFSPMAKAYASDVAMEVSTISVQVMGGNGYSKENPNE 349 Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456 ++ R++ I G+ + + N Sbjct: 350 KYMRDAKVMQIYEGTNQVQKIVIAN 374 >gi|16080770|ref|NP_391598.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168] gi|221311679|ref|ZP_03593526.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168] gi|221316006|ref|ZP_03597811.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320917|ref|ZP_03602211.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325201|ref|ZP_03606495.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY] gi|1168281|sp|P45867|ACDA_BACSU RecName: Full=Acyl-CoA dehydrogenase gi|853760|emb|CAA89868.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168] gi|2636254|emb|CAB15745.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. subtilis str. 168] Length = 379 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 39/285 (13%) Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 T +A+G LTE G+D ++ + ++I D Y L+G K F+++ ++D +I+ A Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170 Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + V F+V + E G + + K+G RS+ T E+ F + L Sbjct: 171 VTDPEKKKKGVTAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 G+ E KI + LD ++ V +A+ A+ YA+ R G + +Q Sbjct: 226 GEEG------EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+A I A+ L+++ A + +A +++MA T A V Sbjct: 280 GIAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 EA++ GG GY ++ + R+ R++ I G+ L + +L Sbjct: 333 EAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377 >gi|85094673|ref|XP_959935.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] gi|28921392|gb|EAA30699.1| glutaryl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] Length = 436 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 29/256 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ ++ +G+Y LSG K W +SP++D ++ A Sbjct: 163 MAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKEGVYLLSGSKTWITNSPIADVLVVWA 222 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 +++ G++ FLV R P L ++KNK G R++ T ++ N + ++ Sbjct: 223 KLQETGKIRGFLVER--SACPPGTLETPQIKNKTGLRASITGMIQLDNCPVPKENMFPEI 280 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 GP L+SA ++ GM +L + + AR R+ G L +++ Sbjct: 281 EGLKGP------FTCLNSARFGIAFGMMGALEDCLARARTYALERKQFKGNPLAKYQLVQ 334 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +A+ A D+A T + ++ DE K+ E M + K C Sbjct: 335 KKLAEAATDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRTLYHARTLQ 387 Query: 417 ECIGGSGYIEERSIAR 432 E GG+ +E I R Sbjct: 388 EIFGGNAVSDEYHIGR 403 >gi|256845081|ref|ZP_05550539.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2] gi|256718640|gb|EEU32195.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_36A2] Length = 381 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ ++ ++++A + G + + + + G + + K+G R ++T EL Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215 Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341 F N LLGD + KI ++ LD + ++ + +A EAI YA+ Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAIGYAKE 269 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G L + IA++ + + AA L ++ A S +AA A++ A T Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY E + R R++ I G+ Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|256380944|ref|YP_003104604.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255925247|gb|ACU40758.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 612 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 46/298 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251 LTE G+D+ A ++ + DG + L G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHLDGVKRFITSGDQDLTENIMHLVLARPEGPGIES 223 Query: 252 RVGC-----FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TF 295 R G FLVP+ D G NG +++K+G +++ T EL F Sbjct: 224 RPGTKGLSLFLVPKFHFDSETGKSTGERNGAFVTNVEHKMGLKASTTCELTFGQHGVPAK 283 Query: 296 GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+LLG+ V G + +++ Y + ++ + A+ YA+ R S + Sbjct: 284 GWLLGE--VHNGIAQMFQVIEYARMMVGTKAIGTLSTGYLNALAYAKERVQSADLTRMTD 341 Query: 349 -------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMA 397 + P ++R++ A+ A D K E A A ++ Sbjct: 342 KTAPRVTITHHPDVRRSLMLQKAYAEGLRAVYLYTATFQDRIKLGGEGQALAEKVNDLLL 401 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K + A +A++++ +GGSG++++ I ++ R+S +S+ G+ LD Sbjct: 402 PVVKGVGSERAYEQLAQSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQSLDFF 459 >gi|237744392|ref|ZP_04574873.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1] gi|256027164|ref|ZP_05440998.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D11] gi|260494055|ref|ZP_05814186.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33] gi|289765142|ref|ZP_06524520.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11] gi|229431621|gb|EEO41833.1| acyl-CoA dehydrogenase [Fusobacterium sp. 7_1] gi|260198201|gb|EEW95717.1| cyclohexanecarboxyl-CoA dehydrogenase [Fusobacterium sp. 3_1_33] gi|289716697|gb|EFD80709.1| acyl-CoA dehydrogenase [Fusobacterium sp. D11] Length = 381 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG-QKISDGIYCLSGH 231 W F E P + IG GLTE GTD A + Q G + L+G Sbjct: 96 WPILKFGTEKQKQKYLPKLASGEWIGAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGS 155 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ ++ ++++A + G + + + + G + + K+G R ++T EL Sbjct: 156 KIFITNAGYANVYVIIAMTDKSKGLKGISAFIVEANTPGFSIGKKEMKLGIRGSSTCELI 215 Query: 291 FSN---TFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARR 341 F N LLGD + KI ++ LD + ++ + +A EAI YA+ Sbjct: 216 FENCRIPKENLLGDKG------KGFKIAMMTLDGGRIGIAAQALGIAAGALGEAIGYAKE 269 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G L + IA++ + + AA L ++ A S +AA A++ A T Sbjct: 270 RKQFGRTLAQFQNTQFQIANLDVKVEAARLLVYKAAWRESNNLPYSLDAARAKLFAAET- 328 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY E + R R++ I G+ Sbjct: 329 ------AMEVTTKAVQIFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|262378082|ref|ZP_06071239.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|262299367|gb|EEY87279.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 384 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K +++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLRTTAVKDGD-FYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P G+ ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EADNP-GITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+ YA R G + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D+ ++ S EA+ +K + +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E SI R YR+ Sbjct: 347 EYSIERFYRD 356 >gi|255318743|ref|ZP_05359970.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262378078|ref|ZP_06071235.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|255304241|gb|EET83431.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|262299363|gb|EEY87275.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 384 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K +++ +P++ + ++A+ G + Sbjct: 124 LTEPESGSDAASLKTTAVKDGD-FYILNGTKRYITNAPLASTYTVMARTNPDIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R + +G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFVVDR-----NTSGISLGKKDKKMGQQGTYTCDVIFENCRVPASALIGGVE-GIGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + +S + V AE A+ YA R G + +++ +AD +I Sbjct: 237 MKVL---DKGRLHISAVSVGAAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D+ + S E++ A++ A +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDQGLNVSTESSCAKLFA-------TEMCGRVADHCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E SI R YR+ Sbjct: 347 EYSIERFYRD 356 >gi|332305778|ref|YP_004433629.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173107|gb|AEE22361.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 126/255 (49%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + K D Y L+G+K W + P +D F++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDH-YVLNGNKMWITNGPDADVFVIYAKTDVSAGSKGM 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G+P Q+L +K+G RS+ T EL F + + N+ + ++L+ Sbjct: 189 SAFIVERGTPGFSQAQKL-DKLGMRSSNTCELVFEDCS---VPAQNLIRNEGDGARVLMS 244 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + +SG + + +A + Y R G + + +++ +AD+ + AA A Sbjct: 245 GLDYERLVLSGGPLGIMQACMDLVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQMNAARA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ ++AA A I+ + ++A + +A++ +GG+GYI E Sbjct: 305 YVYTVARACDRGETTRKDAA-AVIL------YSAELATKMALDAIQLLGGNGYINEFPAG 357 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 358 RLLRDAKLYEIGAGT 372 >gi|323449016|gb|EGB04908.1| hypothetical protein AURANDRAFT_59443 [Aureococcus anophagefferens] Length = 628 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 60/339 (17%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 S +++A +P W PK+ S E T + L+E G+ + + + Sbjct: 163 SITLLAAHGSPEQQATWLPKLTSGEAYGT-------------MCLSESHAGSSLTDLRTS 209 Query: 218 GQKISDGIYCLSGHKWFLSSP---MSDAFI--MLAQVEGR------VGCFLVPRLLEDGS 266 DG Y + G+K +++ +S+ + +LA++ G + FLVP++LE+G+ Sbjct: 210 AAPNGDGSYAIKGNKMWITGGDQGLSENIVHFVLAKLPGAPPGVKGISLFLVPKVLENGA 269 Query: 267 PNGLCYQRLKNKIGNRSNATV-ELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSA 321 N + + +K+G ++ EL F + G+L+G+ P E +K + + + Sbjct: 270 RNDVYLGGMNHKMGQIASVNAGELLFGDRTGAATGYLVGE------PHEGLKCMFVMMNE 323 Query: 322 IMSVSGMRVSLA------EAIHYARRRHVSGGILIDQ-------PVMKRAIADIALDIAA 368 + GM + + A+ YAR R G L + P+++ A L A Sbjct: 324 LRVGVGMGAAASGVAGYTAALRYARDR-AQGRPLTSKDPAAPMVPIVQHADVKRMLLAAR 382 Query: 369 A-----TALSFRLANSFD------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 A ALS A D +A ++ E ++ P+ K W + A++ Sbjct: 383 AYSEGGVALSLYGAELIDKMAVCEDAAAKQELHLVLELLIPMIKSWPSEWGLEANRLAIQ 442 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG+GY + + + YR++ NSI G+ LD+L Sbjct: 443 VHGGAGYTTDFIVEQLYRDARVNSIYEGTTGIQSLDLLG 481 >gi|229020563|ref|ZP_04177305.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] gi|229026781|ref|ZP_04183113.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228734504|gb|EEL85166.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1272] gi|228740727|gb|EEL90983.1| Acyl-CoA dehydrogenase [Bacillus cereus AH1273] Length = 376 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 290 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364 >gi|167629183|ref|YP_001679682.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] gi|167591923|gb|ABZ83671.1| butyryl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] Length = 380 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 35/274 (12%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYC-LSGHKWFLSSPMSDAFIMLA 247 AP+ + LTE G+D A++T +G Y L+G+K F+++ S+A + + Sbjct: 112 APLAAGEIIGAYALTEPNAGSDAASLTLMAS--DEGEYWRLNGNKVFITNA-SEAGLFIT 168 Query: 248 QV---------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 V EG + C +V R G+ R K+G + T EL F N L Sbjct: 169 FVRTDPASRGAEG-ITCLIVER-----DTPGMTVSRPVEKMGLNGSVTCELHFDNA---L 219 Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 + NV + K+ + LD ++++ + +AE A+ Y R+R G + Sbjct: 220 VPKENVLGDVGQGFKVAMQLLDGGRIAIAAQGLGIAEGALEYALRYIRQREQFGRPIAAN 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ +AD+A ++ AA L +R A K +EAA A+ A T A V Sbjct: 280 QGIQWMVADLATEVDAARLLVYRAAWLKTMGKPHGKEAAMAKKFATDT-------AMRVT 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ ++ +GG GY E + R+ R++ I G+ Sbjct: 333 SDCVQLLGGYGYTREYPVERYMRDAKVTQIYEGT 366 >gi|18311282|ref|NP_563216.1| butyryl-CoA dehydrogenase [Clostridium perfringens str. 13] gi|110801111|ref|YP_696974.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124] gi|110802678|ref|YP_699561.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101] gi|168205130|ref|ZP_02631135.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987] gi|168211629|ref|ZP_02637254.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|168213211|ref|ZP_02638836.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969] gi|168216735|ref|ZP_02642360.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239] gi|169347121|ref|ZP_02866063.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495] gi|18145965|dbj|BAB82006.1| acyl-CoA dehydrogenase [Clostridium perfringens str. 13] gi|110675758|gb|ABG84745.1| butyryl-CoA dehydrogenase [Clostridium perfringens ATCC 13124] gi|110683179|gb|ABG86549.1| butyryl-CoA dehydrogenase [Clostridium perfringens SM101] gi|169296804|gb|EDS78933.1| butyryl-CoA dehydrogenase [Clostridium perfringens C str. JGS1495] gi|170663276|gb|EDT15959.1| butyryl-CoA dehydrogenase [Clostridium perfringens E str. JGS1987] gi|170710390|gb|EDT22572.1| butyryl-CoA dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|170715210|gb|EDT27392.1| butyryl-CoA dehydrogenase [Clostridium perfringens CPE str. F4969] gi|182381237|gb|EDT78716.1| butyryl-CoA dehydrogenase [Clostridium perfringens NCTC 8239] Length = 379 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 24/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD A Q + +G Y L+G K F+++ ++D FI+ A Sbjct: 113 PLAKGEKLGAFGLTEPGAGTDAAG--QQTTAVLEGDNYILNGSKIFITNGGVADTFIIFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + G + + + + G +L+ K+G R+++T EL N L+G Sbjct: 171 MTDKSQGTRGISAFIVEKNFPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGK 230 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 G MK L D + ++ + +AE A+ Y + R G L ++ + Sbjct: 231 GFGIA--MKTL---DGGRIGIAAQALGIAEGALEEAVAYMKERKQFGRSLSAFQGLQWMV 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ I AA L ++ A +E K S +AA A++ A +A V +A++ Sbjct: 286 AEMDTKIEAARFLVYKAACLKEEGKPYSIDAARAKLFA-------ADVAMEVTTKAVQLF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E + R R++ I G+ Sbjct: 339 GGYGYTKEYPVERMMRDAKITEIYEGT 365 >gi|325955609|ref|YP_004239269.1| glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922] gi|323438227|gb|ADX68691.1| Glutaryl-CoA dehydrogenase [Weeksella virosa DSM 16922] Length = 452 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 39/256 (15%) Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ--VEGRVGCF 256 GLTE + A +T+ +K +G KW ++P +D FI+ A+ + +V F Sbjct: 194 FGLTEPEVDSGAAGGLTTTCEKTENGWLLNGEKKWIGNAPFADVFIIWARDIADDQVKGF 253 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNR---------SNATV----ELEFSNTFGFLLGDLN 303 LV E +P G+ +++K K+ R +N V +LE +NTF L Sbjct: 254 LV----EKDNP-GISVEKIKGKMALRIVQNGQITLNNCLVPDTDKLEKANTFKDTANVLR 308 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ V A M+ R + A+ Y R+R G + +++ + ++ Sbjct: 309 MTRAGV-----------AWMATGCARGAYENALDYTRKREQFGKPIASFQLIQGHLVEML 357 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ A + +RL+ DE K + E A+ A++ +C ++A A E +GG+G Sbjct: 358 SNLTAMQTMVYRLSKIQDEGKLKDEHASLAKV-------FCTLRTRDIVAHAREVMGGNG 410 Query: 424 YIEERSIARHYRESPA 439 + + ++AR ++ A Sbjct: 411 ILLDHNVARFVADAEA 426 >gi|239996054|ref|ZP_04716578.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii ATCC 27126] Length = 384 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV--EGRVG--CF 256 LTE G+D A++ ++ K +DG Y L+G K F+S S D +++A+ +G G F Sbjct: 124 LTEPGAGSDAASLKTKATK-ADGGYVLNGSKVFISGAGSTDVLVVMARTGEDGPKGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309 VP + +G+ Y + + K+G + T + F N +LLG+ ++ + Sbjct: 183 AVP-----ANTDGIEYGKAEEKMGWNAQPTRMITFDNVKLDASWLLGEEGQGFKMAMQGL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A SV + +L A Y R G + ++ +AD+A ++ AA Sbjct: 238 DGGRINI----ATCSVGTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAA 293 Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A D ++ A A+ A + C +A++ GG GYI+E Sbjct: 294 RQMVRMAACKLDNNDPDKTTYCAMAKRFATDVGFNVCN-------DALQLHGGYGYIKEY 346 Query: 429 SIARHYRESPANSILLGSGNAM 450 + RH+R+ + IL G+ M Sbjct: 347 PLERHFRDVRVHQILEGTNEIM 368 >gi|256395892|ref|YP_003117456.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362118|gb|ACU75615.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 390 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 143/334 (42%), Gaps = 62/334 (18%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRV-------HKDWAPKIFSREYDPTNKAPMQKT 194 +M +L G + S S+ L+T P + + W PK+ + + Sbjct: 72 VMEELGRGDTAVRGIVSVSL-GLVTKPLLAYGTEDQKRRWIPKLTAGD------------ 118 Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISD-GIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251 A+G GLTE G+D + ++ + G + L+G K F+++ +D ++ A+ Sbjct: 119 --ALGCFGLTEPGNGSDAGHLKTKAVRDEKTGDWLLTGSKLFITNGTWADLALIFARTGA 176 Query: 252 RVGC----------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFL 298 + G FLVP G + +K K+G R AT EL E Sbjct: 177 KDGAPDDGPRGITAFLVPT-----DTPGFQAREIKGKLGLRGQATAELILDEVRVPDDAR 231 Query: 299 LGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352 LG++ + KI + LD MSV+ V L +A + YA R G + + Sbjct: 232 LGEIG------QGFKIAMSTLDKGRMSVAAGCVGLIQACLDASVGYAAERDQFGKPIANY 285 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +++ +ADI++D+ A L +R+A+ + + A+ A K +C + A Sbjct: 286 QLVQEMLADISVDLDAGRLLVWRVADLIERGLPYATAASTA-------KLFCSEAAVRAA 338 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GYI+E + ++ R++ ++ G+ Sbjct: 339 NNAIQVFGGYGYIDEYPVGKYLRDARVLTLYEGT 372 >gi|301346698|ref|ZP_07227439.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301510079|ref|ZP_07235316.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|193076509|gb|ABO11161.2| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 403 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 119 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 177 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 178 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 235 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 236 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 289 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 290 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 342 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 343 GKALDIARMARDMMGGNGISDEFGVARH 370 >gi|134101122|ref|YP_001106783.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133913745|emb|CAM03858.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 388 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 88/361 (24%), Positives = 151/361 (41%), Gaps = 48/361 (13%) Query: 121 DRSFEPVVRKQAHK--IRAARLYLMAQLEAGHLMSPSVTSASMVA----LMTTPRVHKDW 174 D+ PVVR+ H A + M QL L P + V+ ++ T + + W Sbjct: 23 DKEVRPVVRELEHSGTYPEALIEQMKQLGIFGLAVPESYGGTPVSTPCYVLVTEELARGW 82 Query: 175 ------------APKI---FSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218 K+ F E P M V + LTE GG+D+ A+ + Sbjct: 83 MSLAGAMGGHTVVAKLLLRFGTEEQKRRYLPGMATGEVRATMALTEPGGGSDLQAMRTVA 142 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGSPNGLCY 272 + +DG Y ++G K W +S S ++ + + R G ++ L+E G GL Sbjct: 143 SRDADG-YVVNGSKTWITNSRRSQLIALMCKTDPRAEPAHKGISIL--LVEHGP--GLTV 197 Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327 R K+G + + EL F + + +LG + G + MK L L A ++ Sbjct: 198 SRDLPKLGYKGVESCELSFDDYRASADAVLGGVE-GAGFAQMMKGLETGRLQVAARALGV 256 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R +L +++ YA+ R G + + +AD+A +AA L+ A +D + Sbjct: 257 ARAALEDSLAYAQERESFGKPIWQHQSIGNYLADMATSFSAARQLTLHAAREYDAGRRVD 316 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 EA A++ A T A + +A+ GG GY E + R++R++P +++G G Sbjct: 317 MEAGMAKLFASET-------AMRIALDAVRIHGGYGYSTEFDVERYFRDAPL--MIVGEG 367 Query: 448 N 448 Sbjct: 368 T 368 >gi|319426128|gb|ADV54202.1| isovaleryl-CoA dehydrogenase, LiuA [Shewanella putrefaciens 200] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYSVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|88706436|ref|ZP_01104141.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71] gi|88699372|gb|EAQ96486.1| acyl-CoA dehydrogenase, short-chain [Congregibacter litoralis KT71] Length = 386 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 35/302 (11%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 + SM+ +P V ++W P + M KT + LTE G+D A++ + Sbjct: 93 ATSMIGRYCSPAVIEEWCPDLV-----------MGKTLAS--YCLTEPGAGSDAASLRTS 139 Query: 218 GQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 ++DG Y ++G K F+S +++ G G V LL G+ Y + + Sbjct: 140 A--VADGDDYLVNGSKVFISGAGETDVLVVMLRTGDAGPKGVSALLVPADAPGITYGKKE 197 Query: 277 NKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 K+G + T + F N G LG ++ ++ +I I A SV + Sbjct: 198 EKMGWNAQPTRMVTFDNVRVPKGNRLGAEGQGFAIAMEGLDGGRINI----ATCSVGTAQ 253 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SE 388 +L EA Y R G + + + +AD+ ++ AA + A+ D + S Sbjct: 254 QALQEAADYVAEREQFGQAIAEFQATQFKLADMLTEVVAARQMVRLAASKLDSKDGQAST 313 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A A+ +A + C EA++ GG GYI E + RH R++ + IL G+ Sbjct: 314 YCAMAKRLATDLGFRVCN-------EALQLFGGYGYIREYPMERHVRDTRVHQILEGTNE 366 Query: 449 AM 450 M Sbjct: 367 IM 368 >gi|325276762|ref|ZP_08142473.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324098104|gb|EGB96239.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 268 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 29/197 (14%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 P I S E PT + LTE + G+D+ + + + DG Y ++G+K F+ Sbjct: 74 PGIVSGEILPT-------------MCLTEPQAGSDLGLLRCRAEPSGDGRYAITGNKLFI 120 Query: 236 SSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 S D ++LA++ G + LVP+ LEDG N + + L++K+G R + Sbjct: 121 SGGDHDLTRQIVHLVLARLPGAPAGSRGLSLLLVPKWLEDGQRNAVQCEGLEHKLGIRGS 180 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 AT L F G+L+G + + + ++SA + V ++ AEA R + Sbjct: 181 ATCALRFEAASGWLVGQAHGGLA-----AMFVMMNSARLHVGLQGLAHAEAAWQCAREYA 235 Query: 345 SGGILIDQPVMKRAIAD 361 ++ P + AD Sbjct: 236 MARRQMNAPGQPKGQAD 252 >gi|299529428|ref|ZP_07042865.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44] gi|298722291|gb|EFI63211.1| isovaleryl-CoA dehydrogenase [Comamonas testosteroni S44] Length = 395 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G+K W + P +D ++ A+ E +G V Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPEMGARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG LN+ K+L Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENILGGLNMGA------KVL 243 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + + R WC + A + E ++ GG+GYI E Sbjct: 304 RSFAYTVAKNLDLLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRLWRDAKLYEIGAGT 378 >gi|163750402|ref|ZP_02157642.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99] gi|161329892|gb|EDQ00878.1| isovaleryl-CoA dehydrogenase [Shewanella benthica KT99] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y +G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYIFNGNKMWITNGPDAQTYVVYAKTDLHKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + +K+G R + T EL F + +LG LN + +K+L Sbjct: 189 TAFIVDRDSKGFSTAQKLDKLGMRGSNTCELVFQDCEVPAENILGGLN------KGIKVL 242 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M + I Y R G + + +++ +AD+ + AA Sbjct: 243 MRGLDYERVVLSGGPLGIMNACMDIVIPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAA 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + Sbjct: 303 KSYVYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYA 355 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 356 TGRLLRDAKLYEIGAGT 372 >gi|149377154|ref|ZP_01894903.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893] gi|149358572|gb|EDM47045.1| acyl-CoA dehydrogenase family protein [Marinobacter algicola DG893] Length = 600 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE G+ +A I + +G Y + G K ++S ++LA+V+G Sbjct: 162 MALTEPHAGSSLADIRTSATPTDEGHYLIKGAKIYISGGEQSLTENIVHMVLAKVKGAPA 221 Query: 253 ----VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F+VP+ + EDG+ NG+ L +K+G R + L F + G+L+G Sbjct: 222 GVKGISLFIVPKFIVDEDGNATERNGVNLAGLIHKLGYRGTTSTALSFGDDAPCHGYLVG 281 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349 + L + + ++ + +A++ G SL A + R S + Sbjct: 282 EPHQGLKYMFQMMNEARVGVGFGAAVIGYRGYMHSLEYAKDRLQGRKPSEKNPEAPQVPI 341 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKYW 403 I+ ++R + AL A D+ + R E ++ P+ K W Sbjct: 342 IEHADVRRMLLAQKAYSEGGLALCLYGARLMDDQHTHPDEQKRMEAGKLLDLLTPVIKAW 401 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P A++ GG+GY E + + +R++ N I G+ LD+L Sbjct: 402 PSEFGPKANDLAIQVYGGAGYTREYPVEQCWRDNRLNPIHEGTNGIQALDLL 453 >gi|170727562|ref|YP_001761588.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812909|gb|ACA87493.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC 51908] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDANTYVIYAKTDLDKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + D G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVDRDSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M + + Y R G + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 IYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|212640555|ref|YP_002317075.1| acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] gi|212562035|gb|ACJ35090.1| Acyl-CoA dehydrogenase [Anoxybacillus flavithermus WK1] Length = 383 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 58/316 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223 T + + PK+ S EY LG LTE G+D+A++ + I D Sbjct: 102 TEEQKQKYVPKLASGEY----------------LGAFCLTEPGAGSDVASLKTTA--IRD 143 Query: 224 GI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 G Y L+G K F+++ +D +I+ A+ E + + ++E +P GL + + K+ Sbjct: 144 GDHYVLNGSKVFITNGGEADTYIVFARTNPEEKGSKGVSAFIVEKHTP-GLVIGKDEKKM 202 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--------KI-LIYLDSAIMSVSGMRV 330 G + TV+L F D+ V P E++ KI + LD + ++ + Sbjct: 203 GLHGSRTVQLSFE--------DMRV---PAENLLGEEGDGFKIAMANLDVGRIGIAAQSL 251 Query: 331 SLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 +AEA +YA+ R G + +Q + +AD+A ++ AA L +R A Sbjct: 252 GIAEAALEHATNYAKERIQFGKPIAEQQGVAFKLADMATNVEAAKLLVYRAAFLRTNGMP 311 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 +EA+ A++ A T M A+ EA++ GG+GY E+ + R +R++ I G Sbjct: 312 CGKEASMAKLFASKT-----AMENAI--EAVQIFGGNGYTEDYPVERLFRDAKVCEIYEG 364 Query: 446 SGNAMVLDVLNLLEKG 461 + L + L +G Sbjct: 365 TSEIQRLVISKHLFRG 380 >gi|89053818|ref|YP_509269.1| acyl-CoA dehydrogenase-like [Jannaschia sp. CCS1] gi|88863367|gb|ABD54244.1| acyl-CoA dehydrogenase-like protein [Jannaschia sp. CCS1] Length = 383 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 121/293 (41%), Gaps = 42/293 (14%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F + P + AI LTE + G+D+A T D +Y L G K Sbjct: 101 AISLFGTDAQKVEWLPKVRAGTAISAFALTEPQSGSDVANSTMTATLDGD-VYVLDGEKT 159 Query: 233 WFLSSPMSDAFIMLAQVEGRVGC-----FLVP---------RLLEDGSPNGLCYQRLKNK 278 W + ++D + + A+ G F+VP LE +P+ L R Sbjct: 160 WISNGGIADVYTVFARTGDAPGARGLSAFVVPADAPGLEVTERLETIAPHPLSTLRFS-- 217 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAI 336 G R A+ L S GF + M +L S + + + G R +L EA+ Sbjct: 218 -GCRVPASARLGESGA-GFKIA-----------MSVLDVFRSTVAAAALGFARRALDEAM 264 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARI 395 RHV G L D +++ IAD+A+DI A+ L +R A + D R + EAA A Sbjct: 265 ARVTTRHVQGAPLFDLQMVQGHIADMAVDIDASALLIYRAAWAKDSGAPRVTREAAMA-- 322 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + A VI A++ GG G ++ + YRE A I G+ + Sbjct: 323 -----KLFSTDQAQKVIDRAVQLHGGDGVRSGETVEKLYREIRALRIYEGASD 370 >gi|86137099|ref|ZP_01055677.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative [Roseobacter sp. MED193] gi|85826423|gb|EAQ46620.1| acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative [Roseobacter sp. MED193] Length = 509 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 16/270 (5%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 P+ + LTE G+D+A + + + + + + ++G K F+S MSD + L Sbjct: 146 PLASGETIATMCLTEPGAGSDLAQVRCRAEPVGES-WQITGEKIFISGGDQDMSDRILHL 204 Query: 247 -------AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 + ++G + FL P DGS N + R++ K+G ++ T +L F L+ Sbjct: 205 VLARTSDSGIKG-LSLFLCPCTRSDGSRNLVTVTRIEEKMGLHASPTCQLAFEGAEAELI 263 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G+ + M +D A+ V+ S A YA R V G L P Sbjct: 264 GEEGKGLMAMFTMMNHARVDVALQGVAHAARSYDIASSYAAER-VQGRTLDGAPATLDQH 322 Query: 360 ADI--ALDIAAATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 AD+ LD A++ R +A+ R + A + P+ K C + M Sbjct: 323 ADVRRMLDEIDGLAMTGRAMAHLACVTMERGDNPALVEFLTPLIKVHCTEAGIRAAELGM 382 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + +GG GY+ E + + YR++ +I G+ Sbjct: 383 QVLGGYGYLREYRLEQTYRDARITAIYEGA 412 >gi|158314819|ref|YP_001507327.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158110224|gb|ABW12421.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 385 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 36/300 (12%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD- 223 + TP + W P + E + +TE G+D+A + + + D Sbjct: 102 LGTPEQKRRWLPGFVAGE-------------SMFAIAMTEPGTGSDLAGMRTTAKLSEDR 148 Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC---FLVPRLLEDGSPNGLCYQRLKNKI 279 Y L+G K F++ + +D I+ A+ + F + L+ D G R +K+ Sbjct: 149 SHYVLNGAKTFITGGVHADQVIVCARTASPIDTDRRFGISLLVVDTRSEGYSVGRKLDKL 208 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMKILIYLDSAIMSVSGMRVSL 332 G R + T EL F + LLG+ N + +++I + + + +R+ Sbjct: 209 GLRVSDTAELAFQDVKVPVENLLGEENAGFYYLGQNLPQERLVIAYGAYAQAAAAVRL-- 266 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 A HY + R + G L K +A ++ AA A++ R + D + + EAA Sbjct: 267 --AKHYVQERKIFGQPLSSFQNTKFELAACQAEVDAAQAVADRALEAHDANELTAAEAAS 324 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A++ +C + A VI ++ GG G+I E IAR Y ++ N I G+ M L Sbjct: 325 AKL-------FCTETAHRVIDRCLQLHGGYGFINEFPIARLYADNRVNRIYGGTSEVMKL 377 >gi|169631512|ref|YP_001705161.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|133917311|emb|CAJ77670.1| acyl-CoA dehydrogenase [Mycobacterium abscessus] gi|169243479|emb|CAM64507.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length = 614 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 45/288 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 167 LTEPDAGSDVGAGRTKAVKQDDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPG 226 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ + E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 227 TKGLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSFGQHGVPAKGWLV 286 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 G+++ + D+ + +++ + A+ YA+ R V G Sbjct: 287 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTR-VQGADMTQLTDKTAPR 345 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-------RSEEAAYAR-IMAP 398 + P ++R++ + AL + A +F +A + +E+A ++ P Sbjct: 346 VTITHHPDVRRSLMTQKVYAEGLRAL-YLYATTFQDAVAAKTINGVEAEDAVKLNDLLLP 404 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + K + A + E+++ GGSG++++ I ++ R++ +S+ G+ Sbjct: 405 VIKGVGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 452 >gi|58581466|ref|YP_200482.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426060|gb|AAW75097.1| acyl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 407 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 18/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ S+ Q+ D Y L+G K F+S + +D +++A+ G G + Sbjct: 147 LTEPGSGSDAASLKSRAQRDGDS-YVLNGSKAFISGAGATDVLVVMART-GEDGARGISA 204 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 G+ Y R + K+G S T + N + N+ E K+ + LD Sbjct: 205 FAVPADAPGISYGRKEEKMGWNSQPTRGVTLENV---RIPAENLLGKEGEGFKMAMKALD 261 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSF 374 ++++ + A+ A RR++ G L D ++ +AD+A + AA + Sbjct: 262 GGRINIAACSLGAAQGALDAARRYMGERRQFGKTLADFQALQFKLADMATQLVAARQMVH 321 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D A + + K + A+ +A++ GG GYI E I R Sbjct: 322 TAARKLDAGSHD------ATVWCAMAKRFATDAGFAICDDALQIHGGYGYIREYPIERLL 375 Query: 435 RESPANSILLGSGNAMVLDVLNLLEKG 461 R+S + IL G+ M + V L G Sbjct: 376 RDSRVHRILEGTNEVMRMIVARHLLNG 402 >gi|326468794|gb|EGD92803.1| isovaleryl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818] gi|326481405|gb|EGE05415.1| isovaleryl-CoA dehydrogenase [Trichophyton equinum CBS 127.97] Length = 431 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ ++ + + DG + L+G K W + Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N + +++L+ L+ ++S M+ L + Y R G Sbjct: 262 PHANVLGQIN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D++ S+ + + Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSSDGTQVKTQDCAGAILYAAER 375 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 376 ATECTLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414 >gi|242024758|ref|XP_002432793.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis] gi|212518302|gb|EEB20055.1| isovaleryl-CoA dehydrogenase, putative [Pediculus humanus corporis] Length = 423 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 29/261 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 L ++E G+D+ ++ + +K G Y L+G+K W + P +D ++ A+ + + Sbjct: 161 LAMSEPGSGSDVVSMKLKAEKDPSGKFYVLNGNKFWITNGPDADVLVVYAKTDTKSKPQH 220 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + FL+ + E G + +K+G R + T EL F N LLG N G Sbjct: 221 GISAFLIEKGFE-----GFSTAQKLDKLGMRGSNTCELIFENCKVPAENLLGPEN--KGV 273 Query: 309 VEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M L Y + ++S V M+ + A Y R G + +++ +AD+ Sbjct: 274 YVLMSGLDY-ERLVLSAGPVGLMQAACDVAFDYVHVRKQFGTKIGQFQLLQGKMADMYTR 332 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++A + F +A + D K+ ++ A + +C + A V +A++C+GG+GYI Sbjct: 333 LSACRSYMFSVARACDAGKANKKDCAGVIL-------YCAENATQVALDAIQCLGGNGYI 385 Query: 426 EERSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 386 NDYPTGRLLRDAKLYEIGAGT 406 >gi|194291322|ref|YP_002007229.1| acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|193225226|emb|CAQ71168.1| putative Acyl-CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] Length = 395 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 45/296 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCL 228 + W P++ S E + + ++E G+D+ AI ++ ++ DG Y + Sbjct: 120 QKWLPQMASGE-------------LVAAIAMSEPGAGSDLKAIRTRALREQTPDGDCYRI 166 Query: 229 SGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +G K F+++ +D ++A+ + G G LV ++E G R+ KIG + Sbjct: 167 NGAKTFITNGYHADLICVVAKTDPEAGSRGVSLV--MVETRDLPGFRRGRILEKIGQKGQ 224 Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334 T EL F + L G P E M I A+ +V+ M+ ++ Sbjct: 225 DTAELFFDDVVVPCSNLLGTQEGQGFYQLMQQLPQERMII------ALGAVATMQRAIEL 278 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 Y R+R V G L D + + +A ++ A D+ R + Sbjct: 279 TTEYVRQRKVFGQPLGD-------LQNTRFKLAECKTVTTIAATFVDDCMQRLMDGQLDA 331 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + K+WC + VI E ++ GG GY+ E IAR Y + + I GS M Sbjct: 332 ATAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEIM 387 >gi|311745339|ref|ZP_07719124.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1] gi|126577877|gb|EAZ82097.1| acyl-CoA dehydrogenase [Algoriphagus sp. PR1] Length = 379 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ V L+E G+D + ++ K++ Y L+G K W + + ++++AQ Sbjct: 113 PLASGEVLGAFCLSEPEAGSDATSQRTEA-KLNGDHYILNGTKNWITNGNSASIYLVIAQ 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + +G + ++K+G R S+T + D+ V P Sbjct: 172 THPELGHKGISVFIVEREWDGFVVGKKEDKLGIRG--------SDTHSLMFTDVKV---P 220 Query: 309 VEDM--KILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPV 354 VE+ + A+ +++G R+ +A A+ Y++ R G + Sbjct: 221 VENRIGEEGFGFTYAMETLNGGRIGIAAQALGIAAGAYELALAYSKEREAFGKPISKHQA 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ +AD+A I AA L ++ A + D+ + S+ +A I K + ++A V E Sbjct: 281 IQFKLADMATQIEAARLLVYKAAWTKDQGEDYSQASA-------IAKLYASQVAMDVTVE 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GY++E + R R++ I G+ Sbjct: 334 AIQVHGGYGYVKEYHVERLMRDAKITQIYEGT 365 >gi|114570211|ref|YP_756891.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris MCS10] gi|114340673|gb|ABI65953.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10] Length = 406 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A + ++ K + G Y L+G K W +SP++D F++ A+ +G++ Sbjct: 148 FGLTEPDAGSDPAGMKTRATKTATG-YTLNGAKMWISNSPIADVFVVWAKSDAHDGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ D GL ++ K+ R++ T E+ N LL ++ GP Sbjct: 207 FVL-----DKGMKGLSAPKIGGKLSLRASITGEIVMDNVEVGEDALLPHVSGLKGP---- 257 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367 L+ A +S + AE +A R++ I D+P + ++ +AD+ +I Sbjct: 258 --FGCLNRARYGISWGAMGAAEFCWHAARQYGLDRIQFDKPLAQTQLYQKKLADMQTEIT 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DEA++ E M I K C A + A + GG+G EE Sbjct: 316 LGLQGSLRIGRLMDEAQAAPE-------MISIMKRNNCGKALDIARMARDMHGGNGISEE 368 Query: 428 RSIARH 433 + RH Sbjct: 369 FQVMRH 374 >gi|327448686|gb|EGE95340.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA1] Length = 382 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVKKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|296331357|ref|ZP_06873829.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676344|ref|YP_003868016.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151472|gb|EFG92349.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414588|gb|ADM39707.1| acyl-CoA dehydrogenase [Bacillus subtilis subsp. spizizenii str. W23] Length = 379 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 33/282 (11%) Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 T +A+G LTE G+D + + ++I D Y L+G K F+++ ++D +I+ A Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGGMKTTAERIGDD-YVLNGSKVFITNGGIADIYIVFA 170 Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + + F+V + E G + + K+G RS+ T E+ F + ++ Sbjct: 171 VTDPEKKKKGISAFIVEKEFE-----GFLTGKKEKKLGIRSSPTTEIMFEDC---VVPAA 222 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 N E KI + LD ++ V +A+ A+ YA+ R G + +Q + Sbjct: 223 NRLGEEGEGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIA 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I A+ L+++ A + +A ++++A T A V EA+ Sbjct: 283 FKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLLAGDT-------AMKVTTEAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + GG GY ++ + R+ R++ I G+ L + +L Sbjct: 336 QIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377 >gi|218232874|ref|YP_002370119.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] gi|218160831|gb|ACK60823.1| acyl-CoA dehydrogenase [Bacillus cereus B4264] Length = 381 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|196041049|ref|ZP_03108346.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|217962831|ref|YP_002341409.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|229094456|ref|ZP_04225527.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|229142085|ref|ZP_04270610.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|229199467|ref|ZP_04326130.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] gi|301056810|ref|YP_003795021.1| short-chain acyl-CoA dehydrogenase [Bacillus anthracis CI] gi|196028217|gb|EDX66827.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|217063578|gb|ACJ77828.1| acyl-CoA dehydrogenase [Bacillus cereus AH187] gi|228584043|gb|EEK42198.1| Acyl-CoA dehydrogenase [Bacillus cereus m1293] gi|228641374|gb|EEK97680.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST26] gi|228688938|gb|EEL42766.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock3-42] gi|300378979|gb|ADK07883.1| short-chain acyl-CoA dehydrogenase [Bacillus cereus biovar anthracis str. CI] Length = 381 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|91793597|ref|YP_563248.1| acyl-CoA dehydrogenase-like protein [Shewanella denitrificans OS217] gi|91715599|gb|ABE55525.1| isovaleryl-CoA dehydrogenase [Shewanella denitrificans OS217] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K+ D Y L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLNARKVGD-RYILNGNKMWITNGPDAHTYVIYAKTDISKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGSKGFTQAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMAACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAARSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYNVARSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|21241039|ref|NP_640621.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21106331|gb|AAM35157.1| acyl-CoA dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 387 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 28/277 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + D + L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGSGSDVVSMKLRADARGD-RFVLNGSKMWITNGPDADVLVVYAKTDPDAGARGI 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 ++E G P Q+L +K+G R + T EL F+ N G L G V ++ Sbjct: 187 TAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELVFTDCEVPAENVLGTLNGGARVLMSGLD 245 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++++ + + M V L Y R G + +M+ +AD+ + + A Sbjct: 246 FERVVLAGGPLGLMAAAMDVVLP----YVHERKQFGEPIGTFQLMQAKLADMYVGLNACR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D ++ ++AA A + A W + +A++ +GG+GYI + Sbjct: 302 AYVYAVARACDAGRTTRQDAAGAILYAAEKATW-------LTGQAIQVLGGNGYINDYPT 354 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 GRLWRDAKLYEI--GAGTSEIRRML----IGRELFER 385 >gi|332993023|gb|AEF03078.1| acyl-CoA dehydrogenase family protein [Alteromonas sp. SN2] Length = 384 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGR----VGCF 256 LTE G+D A++ ++ + +G Y L+G K F+S S D +++A+ G + F Sbjct: 124 LTEPGAGSDAASLKTKATPVDNG-YVLNGAKVFISGAGSTDVLVVMARTGGDGPKGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309 VP +G+ Y + + K+G + T + F N LGD ++ V Sbjct: 183 AVP-----ADADGIIYGKAEEKMGWNAQPTRMITFDNVKIDASCRLGDEGQGFKMAMQGV 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A S+ + +L A Y R G + ++ +AD+A ++ AA Sbjct: 238 DGGRINI----ATCSIGTAQQALNVARQYLTEREQFGNPIATFQALQFKLADMATELVAA 293 Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A+ D + S A A+ A + C +A++ GG GYI+E Sbjct: 294 RQMVRMAASKLDSKHADSSTYCAMAKRFATDVGFKVCN-------DALQLHGGYGYIKEY 346 Query: 429 SIARHYRESPANSILLGSGNAM 450 + RH R+ + IL G+ M Sbjct: 347 PLERHVRDVRVHQILEGTNEIM 368 >gi|228924078|ref|ZP_04087354.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835568|gb|EEM80933.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 381 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|254500145|ref|ZP_05112296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222436216|gb|EEE42895.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 603 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 36/291 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D I L A Sbjct: 170 MNLTEPQAGSDLNALKARAERNDDGTYRVYGQKIFITYGEHDLTDNIIHLVLARLPDAPA 229 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 G + FLVP+ L EDGS N + +++K+G + T + + + G+L+ Sbjct: 230 GTRG-ISLFLVPKFLVNEDGSLGARNDVHCAGVEHKLGIHGSPTCTMVYGDEGGATGWLI 288 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGG------ILI 350 G+ N + M L I + + +A YA R +V G + Sbjct: 289 GEENKGLACMFTMMNNARLAVGIQGLGVAERACQDAHAYALERKQGNVPGKKGDGMVAIA 348 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE------AAYARIMAPITKYWC 404 P +KR++ + A A+ + A++ D A + ++ + A ++ PI K Sbjct: 349 HHPDIKRSLLGMRTRTQVARAICYSCAHAIDMADTATDPDQKKHWSERAGLLTPIAKALS 408 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 V ++ GG GY+EE +A+H R++ I G+ +D++ Sbjct: 409 TDFGVEVATIGVQIHGGMGYVEETGVAQHLRDARIAPIYEGTNGIQSIDLV 459 >gi|149375956|ref|ZP_01893723.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149359836|gb|EDM48293.1| acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 383 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 125/308 (40%), Gaps = 40/308 (12%) Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 AL T VH D S + + P + A+G + +TE G+D+ AI + Sbjct: 84 ALSTNVMVHSDIVAPYLSHIGNEEQRQYWLPKMVSGEAVGAIAMTEPGAGSDLQAIRTSA 143 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D Y L+G K F+++ +D I+ A+ + + G + L D S G R + Sbjct: 144 VKDGDD-YILNGSKTFITNGQHADMVIVAAKTDPKAGARGISLFLVDTSLPGYSKGRNLD 202 Query: 278 KIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIM 323 KIG S T EL FS+ F +L+ +L P E + I + Sbjct: 203 KIGQHSGDTSELFFSDMRIPASALLGEEGQGFMYLMREL-----PRERLVI------GAL 251 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DE 382 V+ R +L I+YA+ R + G L + IA + D R+ +F DE Sbjct: 252 GVAAARGALDLTINYAQERELFGQKLAQLQNTRFEIARMETDC--------RVNRAFVDE 303 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + E+ A + KY +M V ++ GG GY E I+R + ++ I Sbjct: 304 CIALYEKGELDAPTASMAKYSATEMQCRVADGCLQLFGGYGYTSEYPISRAFIDARVQRI 363 Query: 443 LLGSGNAM 450 G+ M Sbjct: 364 YGGTSEVM 371 >gi|85067515|gb|ABC69243.1| probable acyl-CoA dehydrogenase [Pseudomonas citronellolis] Length = 386 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 28/271 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------STGPVED 311 ++ G+ +K+G RS+ T ++ F D+ V + G Sbjct: 182 SLIMVPMKSKGISVSPHLDKLGMRSSETAQVFFD--------DVRVPQRNRIGAEGAGFM 233 Query: 312 MKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M++L + L A + GM + I Y + R G LID V+ +A++ +I Sbjct: 234 MQMLQFQEERLFGAASGIKGMEYCVNATIDYCKERKTFGQALIDNQVIHFRMAELMTEIE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AL+++ + K + A+ A++ ++A V ++ GG G++ E Sbjct: 294 CLRALTYQATEQYIRGKDVTRLASMAKLKVG-------RLAREVTDACLQYWGGQGFMWE 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLL 458 I+R YR++ SI G+ M+ + L+ Sbjct: 347 NPISRAYRDTRLVSIGGGADEIMLGIICKLM 377 >gi|296808727|ref|XP_002844702.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480] gi|238844185|gb|EEQ33847.1| isovaleryl-CoA dehydrogenase [Arthroderma otae CBS 113480] Length = 431 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ ++ + + DG Y L+G K W + Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGYVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N + +++L+ L+ ++S M+ L + Y R G Sbjct: 262 PHANVLGKVN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D++ E + + + Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAVSPEGTQVRTQDCAGSILYAAER 375 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414 >gi|226944579|ref|YP_002799652.1| glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ] gi|226719506|gb|ACO78677.1| Glutaryl-CoA dehydrogenase [Azotobacter vinelandii DJ] Length = 395 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257 GLTE G+D + ++ +K +DG Y LSG K W +SP++D F++ A+ +GR+ F Sbjct: 138 FGLTEPNFGSDPGGMATRARK-ADGGYRLSGSKTWITNSPIADVFVVWAKTDDGRIRGF- 195 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ F + +++ GP Sbjct: 196 ---ILEKGW-QGLSAPAIHGKVGLRASITGEIVMDEVFVPEENMFPEVSGLKGP------ 245 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AE A Y R G L ++++ +AD+ +IA Sbjct: 246 FTCLNSARYGIAWGALGAAEFCYETARQYTLDRAQFGRPLAANQLIQKKLADMLTEIALG 305 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 R+ DE + E + I K C + + A + +GG+G +E Sbjct: 306 LQACLRVGRLKDEGNAPVEATS-------IIKRNSCGKSLDIARMARDMLGGNGISDEFG 358 Query: 430 IARH 433 +ARH Sbjct: 359 VARH 362 >gi|120405797|ref|YP_955626.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958615|gb|ABM15620.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T++ K D Y L+G K F++S + +++ A G G + Sbjct: 124 LAITEPGGGSDVGHLTTRAVKDGD-CYILNGAKTFITSGVRADYVVTAVRTGGPGAGGIS 182 Query: 260 RLLED----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 ++ D G GL R +K+G RS+ T EL +++ G L+G N + Sbjct: 183 LIVVDKDGPGCSPGLQVTRKLDKMGWRSSDTAELSYTDARVPAGNLVGAENTGFLQIAAA 242 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A + S + L + + R R G LI + ++ +A++A I A Sbjct: 243 FVSERVGLAAQAYSSAQRCLDLTVEWCRSRETFGKPLITRQSVQNTLAEMARRIDVARVY 302 Query: 373 SFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + + ++ E +A+ A W V +A++ GG GY+ E + Sbjct: 303 THHVVERELAGETNLIAEVCFAKNTAVDAGEW-------VAHQAVQLFGGMGYMAESEVE 355 Query: 432 RHYRESPANSILLGSGNAMVLDVL 455 R YR+ + +G G + +L L Sbjct: 356 RQYRD--MRILGIGGGTSEILTAL 377 >gi|13542136|ref|NP_111824.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] gi|14325567|dbj|BAB60470.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] Length = 369 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 59/320 (18%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 ++AL K + ++F+ KA M GL +TE GG+D+A I + K Sbjct: 87 VIALFGNDEQKKKYLSRVFA------GKAKM-------GLAVTEPGGGSDVANIKTTAVK 133 Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQ 273 D Y L+G K F+++ ++D F++LA+ + F+V R E G Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSQEKKKHHGMSVFIVERDFE-----GFRSN 187 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSL 332 ++K K+G R+ T EL N + + N+ P I+ + D + V+ + + Sbjct: 188 KIKGKLGVRATDTAELTLENV---KVPEENLVGEPGRGFYYIMTFFDISRAYVAAQALGI 244 Query: 333 AEAIHYARRRHVS----GGILIDQPV-MKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 AE I R +S G L QP ++ IAD+A I A L++ Sbjct: 245 AEGI---LERTLSILQKDGPLTSQPERVQFTIADMATRIEATKLLTY------------- 288 Query: 388 EEAAYARIMAP------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 E A+Y P + K + + A V +AME G G SI R +R++ Sbjct: 289 EAASYIFNFNPNPAVTSMAKAYAAETAVYVSRKAMEVTGIDGLTS--SIERSFRDAKIME 346 Query: 442 ILLGSGNAMVLDVLNLLEKG 461 I G+ L + +L+ G Sbjct: 347 IWEGTSEIEKLVIARMLKTG 366 >gi|299529435|ref|ZP_07042872.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298722298|gb|EFI63218.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 376 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE G+D +A+ + + G Y ++G K F++S + D I++A Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP G+P G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKTAGKKGMSAFIVP----TGNP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ Y++ R G + + + Sbjct: 225 AEGEGYKIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ A I AA L + A+ D +EAA A++ A +MA V + A+ Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG G + + + R YR+ I G+ + Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|290960182|ref|YP_003491364.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] gi|260649708|emb|CBG72823.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] Length = 389 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 52/319 (16%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-K 220 V L TP +W P++ S E V GLTE GG+D A + + Sbjct: 101 VHLFGTPAQKAEWLPRLCSGE-------------VLGAFGLTEPDGGSDAGATRTTARLD 147 Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLK 276 S + ++G K F+++ +D A + + V GR G L+ ++ G Sbjct: 148 TSTNEWVINGSKCFITNSGTDITALVTVTAVTGRTPEGKPLISSIIVPSGTPGFTVAAPY 207 Query: 277 NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSG 327 +K+G ++ T EL F+ D+ V P E++ + L LD +++S Sbjct: 208 SKVGWNASDTRELSFA--------DVRV---PAENLLGEEGRGYAQFLRILDEGRIAISA 256 Query: 328 MRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + LA E++ YA+ RH G + ++ IAD +++ A TA RL S+ + Sbjct: 257 LATGLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RL--SWRD 309 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 A R + A + K + +A +A + GG G++ E +AR +R+S + Sbjct: 310 AAYRLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KIL 367 Query: 443 LLGSGNAMVLDVLNLLEKG 461 +G G + V +L E G Sbjct: 368 EIGEGTSEVQRMLIARELG 386 >gi|325525847|gb|EGD03572.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49] Length = 380 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 28/275 (10%) Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSD 241 Y P +SVAI TE G+D++AI + ++ D Y ++G K W + + Sbjct: 108 YLPEAAKGRTVSSVAI----TEPEAGSDVSAIRTTARRDGDS-YVINGQKSWITWAAQAH 162 Query: 242 AFIMLAQV-EGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN--- 293 ++ A+ EGR + FL+ D GL R + K+G + T ++ F + Sbjct: 163 YMLVFARTSEGRGHDGISVFLI-----DTKTPGLKIGRKEVKMGRHGSPTYQVFFEDMRV 217 Query: 294 TFGFLLGDLNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILID 351 LLG+ G MKIL + S S G+ + +L E++ YA+ R G + D Sbjct: 218 AADCLLGE--EGNGFKACMKILDLNRPSVAASSLGLAQAALDESVQYAKDRRQFGKRIGD 275 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ +AD+A+ I AA AL + D + + +++ + K + +A Sbjct: 276 FQAIQFKLADMAMKIEAARALLYTSTQEIDAG-----DTSRLTLLSSMAKCYVTDIAMEA 330 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ G GY E + R R++ N IL G+ Sbjct: 331 ALEAVQVHGSYGYSTEYPVERFMRDAKLNQILEGT 365 >gi|120555036|ref|YP_959387.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8] gi|120324885|gb|ABM19200.1| isovaleryl-CoA dehydrogenase [Marinobacter aquaeolei VT8] Length = 388 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 19/265 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG L ++E G+D+ ++ + D Y L+G+K W + P + +++ A Sbjct: 119 PKLVTGEHIGALAMSEPNAGSDVISMKLHARDEGDH-YVLNGNKMWITNGPDAHTYVIYA 177 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + + G V + + G + +K+G R + T EL F + + NV G Sbjct: 178 KTDPKGGSKGVTAFIVERDYPGFSRHQKLDKLGMRGSNTCELVFQDC---KVPKENVLGG 234 Query: 308 PVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 K+L+ LD + +SG M+ ++ + Y R R G + + +++ +AD Sbjct: 235 VGNGAKVLMSGLDYERLVLSGGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVAD 294 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A + + +A S D ++ ++AA A + + +MA + +A++ +GG Sbjct: 295 MYTWMNTAKSYVYMVAQSADRGETTRKDAAGAIL-------YSAEMATKLALDAIQLLGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GYI E R R++ I G+ Sbjct: 348 NGYINEYPTGRLLRDAKLYEIGAGT 372 >gi|298489400|ref|ZP_07007411.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298155974|gb|EFH97083.1| Glutaryl-CoA dehydrogenase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 393 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPNHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + ++ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPNVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA +S + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|284990870|ref|YP_003409424.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284064115|gb|ADB75053.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus DSM 43160] Length = 379 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 37/294 (12%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A TP + W P + + E + G L+E + G+D AA+ + + + Sbjct: 100 LATFGTPAQQERWLPAMLAGE-------------LVGGYSLSEPQAGSDAAALACRAEAV 146 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNK 278 G W +D + + A+ EG G CFL P G GL + R + K Sbjct: 147 EGGYRVTGTKSWITHGGRADFYALFARTGEGSRGISCFLAP-----GRVEGLSFGRPEEK 201 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-- 335 +G + T +N G + + + + I LDS + ++ + LA+A Sbjct: 202 MGLHAIPTT---MANWDGARIEADRLIGAEGQGLSIAFSALDSGRLGIAAVATGLAQAAL 258 Query: 336 ---IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + YA R G +ID + +AD+A + A A+ D A+ R Y Sbjct: 259 EAAVDYAHERSTFGRRIIDHQGLGFLLADMAAAVDTAR------ASYLDAARRRDAGRPY 312 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 R A + K A V +A++ +GG GY + + R+ RE+ I G+ Sbjct: 313 GR-QASVAKLVATDAAMRVTTDAVQVLGGYGYTRDFPVERYMREAKVMQIFEGT 365 >gi|296505766|ref|YP_003667466.1| short chain acyl-CoA dehydrogenase [Bacillus thuringiensis BMB171] gi|296326818|gb|ADH09746.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis BMB171] Length = 376 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|326384314|ref|ZP_08205995.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196912|gb|EGD54105.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 378 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 26/255 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + + + D Y ++G K W ++D + + A+ +G G CFL Sbjct: 127 LSEPQAGSDAAALACRAEAVGDD-YRITGEKAWITHGGIADFYNLFARTGDGSKGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 VP DG+ GL + R + K+G + T + G L+ + ++I Sbjct: 186 VP----DGT-EGLSFGRPEEKMGLAAVPTTSARYD---GALVPAERRIGAEGQGLQIAFS 237 Query: 318 -LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + +A EA+ YA+ R G +ID + +AD+A + +A Sbjct: 238 ALDSGRLGIAAVATGIAQAALDEAVAYAKERETFGRKIIDHQGLGFLLADMAAAVDSAR- 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D A+ R Y+R A + K A V +A++ GG+GY + + Sbjct: 297 -----ATYLDAARRRDAGLPYSR-NASVAKLVATDAAMKVTTDAVQVFGGNGYTRDFRVE 350 Query: 432 RHYRESPANSILLGS 446 R RE+ I G+ Sbjct: 351 RFMREAKITQIFEGT 365 >gi|291562341|emb|CBL41157.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SS3/4] Length = 637 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D + D Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTESNAGSDAGGTETTALDKGD-YYLLNGGKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F++ + N+ Sbjct: 172 TTPDIGTRGISAFIVEKGWKGFEFGDHYDKMGIRSSSTAELIFNDV---KVPKENLLGKE 228 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD + ++ + +A+ A+ Y++ R G + Q + +AD+ Sbjct: 229 GEGFKIAMSTLDGGRIGIAAQALGIAQGAFEHALSYSKERVQFGKPIAAQQSIAFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A L + A ++ E+A A++ + +A V +A++ GGS Sbjct: 289 ATKLRCARFLIYSAAELKEQHAPYGMESAMAKM-------YASDIALEVTNDALQIHGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G+++ + R YR++ +I G+ Sbjct: 342 GFLKGMEVERAYRDAKITTIYEGT 365 >gi|295663286|ref|XP_002792196.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] gi|226279371|gb|EEH34937.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb01] Length = 428 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F++ R + P +KNK R++ T ++ + + D+ GP Sbjct: 224 GFIIER--DQCPPGTFETPAIKNKTALRASITGMIQMDSCPVPEANMFPDVEGLKGP--- 278 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I+ AR R+ G L ++++ +AD D Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCINRARSYALERKQFKGNPLAKYQLVQKKLADATTD 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + +++ DE K+ E M + K C A A E GG+ Sbjct: 336 AAYGTLAAIQVSRLKDEGKAAPE-------MISMIKRQNCDRALAGARTLQEIFGGNAAS 388 Query: 426 EERSIARH 433 +E I RH Sbjct: 389 DEYHIGRH 396 >gi|33599601|ref|NP_887161.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567197|emb|CAE31111.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 382 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 35/280 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + P++ + E + LTE G+D A++ + K D Y Sbjct: 102 TPEQQEKYLPRLATGE-------------IMASFALTEPEAGSDAASLRTTAIKDGDA-Y 147 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F++ +P + F ++A+ G V + D G+ + + K+G + Sbjct: 148 VVNGTKRFITNAPHAGMFTLMARTNPADKGAAGVSAFIVDAGTPGISFGKRDRKMGQKGA 207 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AI 336 T ++ F N L+G L G MK+L + + ++ + V++AE A+ Sbjct: 208 HTCDVIFENVRVPAANLIG-LKEGQGFKTAMKVL---EKGRIHIAAVCVAVAERMLDMAL 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA R G + +++ +AD +I AA ++ A D+ S EA+ A Sbjct: 264 RYAAERKQFGQPIGTFQLVQAMLADSKAEIYAARSMVLDAARRRDDKLPNSTEASCA--- 320 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 K + +M V A++ GG+GY+ E +I R YR+ Sbjct: 321 ----KMFASEMCGRVADRAVQIFGGAGYMSEYAIERFYRD 356 >gi|326330442|ref|ZP_08196750.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325951717|gb|EGD43749.1| butyryl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 388 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 20/282 (7%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238 S E T P+ + GL+E+ G+D AA+ + + DG + L+G K W ++ Sbjct: 109 SEELKATYLPPVARGDALFAYGLSEREAGSDTAAMKCRAIRTGDG-WVLNGQKSWITNAS 167 Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 ++ + +LA +GR G + ++E + G + + K+G + + T EL F + Sbjct: 168 AAEYYTVLAVTDPDGRRGANVTAFVVER-NDEGFTFGAPERKLGIKGSPTRELRFDDV-- 224 Query: 297 FLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + + + E +K+ L LD +++ V +A+ A+ Y R R G + Sbjct: 225 -RIPEDRMVGREGEGLKLALQTLDHTRVTIGAQAVGIAQGALDHALDYVRERKQFGKRIA 283 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 D ++ +AD+ + + AA + + A AKS +A + K + +A Sbjct: 284 DFQGLQFMLADMGMKLEAARNMVYVAA-----AKSERNDADLS-FFGAAAKCFASDVAMQ 337 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 V ++++ +GG GY + + R R++ I G+ L Sbjct: 338 VTTDSVQLLGGCGYTRDFPLERMMRDAKITQIYEGTNQVQRL 379 >gi|119503779|ref|ZP_01625861.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma proteobacterium HTCC2080] gi|119460287|gb|EAW41380.1| acyl-CoA dehydrogenase, short-chain specific [marine gamma proteobacterium HTCC2080] Length = 382 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 31/248 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 +G++E G+ + A+ + + D Y ++G K W + SD +LA+ G +G Sbjct: 124 VGMSEPDAGSQVTAVRCRAVEDGDD-YVINGEKLWISNGGYSDFIFLLARFNNDPVGGLG 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLK-NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 LV R +DG Y+ K+G S +T ++ F + + N+ P E MK Sbjct: 183 LILVER--QDG------YETCDIEKMGLNSQSTAQVSFQDV---RVPKTNLMVPPGEAMK 231 Query: 314 -ILIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +LI L + +M++ + SL E++ YA+ R G + ++ I ++A + Sbjct: 232 TLLISLSGSRPLVSLMALGVAQASLDESVSYAQDRTQFGKPIAGHQLISAKIGEMATKVE 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L+ + + D + RS+ + A ++K++ +MA V++EA++ GG+G +E Sbjct: 292 AGKLLALKALSQIDRGE-RSD------LCAAMSKWFGTQMACEVVSEALQIHGGNGITKE 344 Query: 428 RSIARHYR 435 + YR Sbjct: 345 YPVEYMYR 352 >gi|116050496|ref|YP_790685.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115585717|gb|ABJ11732.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 375 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 30/282 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + S+ LTE + G+D + + ++ ++ D Y L+G K F++S +++ V Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G+ G F+VP G R+++K+G ++ T +L F++ LG Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A +V R + A YA R G +I+ + Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A S E A + K + +MA V + A+ Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + +GG GY+++ + R YR+ I G+ + L ++ L Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIVRSL 375 >gi|262376460|ref|ZP_06069689.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308599|gb|EEY89733.1| glutaryl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 399 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 115 FGSEEQKQKYLPKLATGEYIGCFGLTEPDYGSDPGSMITRAKKVEGG-YRLTGAKMWITN 173 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 174 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 231 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 232 VFVPEENAFPEVRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 285 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA ++ R DE + E + + K C Sbjct: 286 GRPLAANQLIQKKLADMQTEIALGLQVALRFGRMKDEGIASVEGTS-------LIKRNNC 338 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 339 GKALDIARLARDMMGGNGISDEFGVARH 366 >gi|206970311|ref|ZP_03231264.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|228955590|ref|ZP_04117591.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961606|ref|ZP_04123215.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051013|ref|ZP_04194561.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] gi|229072809|ref|ZP_04206008.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] gi|229082556|ref|ZP_04215019.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] gi|229112756|ref|ZP_04242288.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|229130591|ref|ZP_04259547.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|229147882|ref|ZP_04276223.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|229153505|ref|ZP_04281683.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] gi|206734888|gb|EDZ52057.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|228630109|gb|EEK86760.1| Acyl-CoA dehydrogenase [Bacillus cereus m1550] gi|228635532|gb|EEK92021.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST24] gi|228652930|gb|EEL08812.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4] gi|228670590|gb|EEL25902.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock1-15] gi|228700988|gb|EEL53511.1| Acyl-CoA dehydrogenase [Bacillus cereus Rock4-2] gi|228710300|gb|EEL62275.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] gi|228722322|gb|EEL73719.1| Acyl-CoA dehydrogenase [Bacillus cereus AH676] gi|228798088|gb|EEM45092.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804093|gb|EEM50711.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|195111940|ref|XP_002000534.1| GI22465 [Drosophila mojavensis] gi|193917128|gb|EDW15995.1| GI22465 [Drosophila mojavensis] Length = 407 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 120/265 (45%), Gaps = 19/265 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D +A ++ + + G Y L+G K W +S + I+ A ++ + + Sbjct: 148 LSEPGSGSDASAASTTAKLNAGGDYLLNGTKAWISNSKEASGGIIFATIDKSLKHKGITA 207 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 L + + GL + ++K+G +++T +L S G G ++ ++ + Sbjct: 208 FLTEKNVPGLAIAKNESKMGMCASSTCQLTLDDVCVPQSQVLGSPGGGFRIAMESLDCGR 267 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I A S + +L A+ YA +R G L ++++ +AD+AL + A L+ Sbjct: 268 IGI----AAQSTGIAQAALELALDYAEKRVAFGQRLSRLQMIQQKLADMALRVETARLLT 323 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D S ++EAA A++ A T +C + ++ +GG GY + + Sbjct: 324 WRAAWLKDNGMSITKEAAMAKLHASETATYCAH-------QCIQILGGMGYTTDLPAEMY 376 Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458 YR + I G+ + + N + Sbjct: 377 YRNARVTEIYEGTSEIQRIVIANCV 401 >gi|228936627|ref|ZP_04099421.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823062|gb|EEM68900.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|198429737|ref|XP_002129400.1| PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Ciona intestinalis] Length = 421 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 161 FALSEPGNGSDAGAASTTARDDGD-CWVLNGTKSWITNSYEASAAVVFATTDKSKKHKGI 219 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301 F+VP E GL + ++K+G R ++T L F + FGF + Sbjct: 220 SAFIVPMPTE-----GLSLGKKEDKLGIRGSSTANLIFDDCKIPKENLVGESGFGFKIAM 274 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + G I + S + ++ + SL AI YA R G + ++ ++D Sbjct: 275 STLDAGR-------IGIASQALGIA--QASLDCAIAYADDRKAFGAPISKLQSIQFKLSD 325 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +AL I +A L++R A D + ++EAA A++ A T + +A++ +GG Sbjct: 326 MALKIESARLLTWRAAKLKDAGMNFTKEAAMAKLAASETATFASH-------QAIQILGG 378 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G++ + RHYR++ I G+ Sbjct: 379 MGFVSDMPAERHYRDARITEIYEGT 403 >gi|187479665|ref|YP_787690.1| acyl-CoA dehydrogenase [Bordetella avium 197N] gi|115424252|emb|CAJ50805.1| acyl-CoA dehydrogenase [Bordetella avium 197N] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 31/261 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---V 253 LTE G+D AI + + D Y L+G K +++ +P++ F ++A+ E R + Sbjct: 122 FALTEPDAGSDAMAIRTTATRDGDH-YILNGTKRYITNAPIAGLFSVMARTAPERRADSI 180 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 CFLV E G+P G+ R K+G T ++ F N LLG+ +G Sbjct: 181 SCFLV----EAGTP-GITLGRPDKKMGQAGALTCDVVFDNCRVPASALLGEQE-GSGFRT 234 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M++L D + ++ + V +A+ A YA+ R G + + +++ +AD + Sbjct: 235 AMRVL---DKGRLHIAALCVGIAQRLIRDATRYAQDRQQFGKPIAEFQLVQAMLADSQAE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A D ++ + EAA A K + +M V A++ GG+GY+ Sbjct: 292 CYAARCMVLDAARKRDRGENTTMEAACA-------KMFATEMVGRVADRAVQIHGGAGYM 344 Query: 426 EERSIARHYRESPANSILLGS 446 E ++ R YR+ I G+ Sbjct: 345 AEYAVERFYRDVRLFRIFEGT 365 >gi|49481208|ref|YP_039335.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196036517|ref|ZP_03103912.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|218906521|ref|YP_002454355.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|300117856|ref|ZP_07055623.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1] gi|49332764|gb|AAT63410.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195990850|gb|EDX54823.1| acyl-CoA dehydrogenase [Bacillus cereus W] gi|218535888|gb|ACK88286.1| acyl-CoA dehydrogenase [Bacillus cereus AH820] gi|298724720|gb|EFI65395.1| acyl-CoA dehydrogenase [Bacillus cereus SJ1] Length = 376 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|42784518|ref|NP_981765.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|222098814|ref|YP_002532872.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus cereus Q1] gi|42740450|gb|AAS44373.1| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987] gi|221242873|gb|ACM15583.1| short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase [Bacillus cereus Q1] gi|324329292|gb|ADY24552.1| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 376 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|227485688|ref|ZP_03916004.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172] gi|227236360|gb|EEI86375.1| acyl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172] Length = 641 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 18/268 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE+ G+D A T ++ Y L+G K F++ +P +D +++ A Sbjct: 113 PLAKGEKIGAFGLTEENAGSD-AGGTETTAVLNGDHYILNGKKIFITNAPKADTYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + +K+G RS++T EL F N + N+ Sbjct: 172 TTPGIGTHGISAFIVEKEFEGFTFSDHYDKLGIRSSSTAELHFDNV---KVPKENLLGKE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + I + LD + ++ + + + A+ YA+ R G + +AD+ Sbjct: 229 GQGFAIAMATLDGGRIGIASQALGIGQGAYESALAYAKEREQFGMPIAHLQRNTFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A + + A + + S EAA A+ +A +A + EA++ GGS Sbjct: 289 ATYLRGARLMIYSAAELKENHERYSAEAAMAKQVA-------SDLAMKITTEAVQLYGGS 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G+I+ + R +R++ I G+ M Sbjct: 342 GFIKGVDVERFFRDAKITQIYEGTNEIM 369 >gi|71907972|ref|YP_285559.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] gi|71847593|gb|AAZ47089.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] Length = 378 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D AAI + ++++ G Y L+G K W ++ ++ ++ A+ + G + Sbjct: 121 FALTEPAAGSDSAAIRTSAKRVAGG-YELTGSKIWISNASLASFMVVFAKTDPAAGHKGI 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + + GL K+G R+ T E+ F F + + N E I + Sbjct: 180 SAFIVERESAGLSVGEPLGKLGQRAAPTCEVFFDQVF---VPEENRLGAEGEGFSIAMRT 236 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 D + V+ + L E++ YA R G LID V+ +AD+ + + A+ L Sbjct: 237 FDQSRPMVAAFGLGLTQRCIDESLAYACERQSMGKRLIDHQVIAHRLADMRIRLEASRLL 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +++ A D+ + +A+ A+ W EA++ GG GY E + + Sbjct: 297 TYQSAWLADQGLRNTSQASIAKAFTSDAAMWAAT-------EAIQIFGGMGYSTEYPVEK 349 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 350 LFRDAKVLQIYEGT 363 >gi|163943030|ref|YP_001647914.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163865227|gb|ABY46286.1| acyl-CoA dehydrogenase domain protein [Bacillus weihenstephanensis KBAB4] Length = 376 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|315445940|ref|YP_004078819.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315264243|gb|ADU00985.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 387 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 36/303 (11%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A MV T K W PK+ S + LTE G+D +A+ ++ Sbjct: 95 AWMVDSFGTEEQRKLWVPKLASMD-------------AIASYCLTEPGAGSDASALRTKA 141 Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CFLVPRLLEDGSPNGLCYQ 273 + D Y L G K F+S + SD +I++A+ +G G F+VP+ GL + Sbjct: 142 VRSGDE-YVLDGVKQFISGAGTSDVYIVMARTGSDGPKGISAFVVPK-----ETPGLSFG 195 Query: 274 RLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSG 327 + K+G + T ++ L G TG MK L ++ A S+ G Sbjct: 196 TDEVKMGWNAQPTRQVILEGARVPADALLGGPDGEGTGFGIAMKGLNGGRINIAACSLGG 255 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + + + + Y R GG L+D+P ++ +AD+A + + AL +R A + D Sbjct: 256 AQAAYDKTVSYLADRQAFGGSLLDEPTIRFTLADMATALETSRALLWRAATALDNDHPDR 315 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E + + K + V +A++ GG GY+ E + + R+ + IL G+ Sbjct: 316 VE------LCAMAKRYVTDACFEVADQALQLHGGYGYLREYGLEKIVRDLRVHRILEGTN 369 Query: 448 NAM 450 M Sbjct: 370 EIM 372 >gi|257057813|ref|YP_003135645.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256587685|gb|ACU98818.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 614 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 52/302 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG----- 251 LTE G+D+ A ++ K DG + L G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHLEGVKRFITSGDQDMTENIMHLVLARPEGPGIEP 223 Query: 252 -----RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296 + FLVP+ L D G NG+ ++ K+G + + T EL F G Sbjct: 224 KPGTKGLSLFLVPKFLFDTNTGELGERNGVFVTGVEEKMGLKVSTTCELTFGQHGTPAKG 283 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP- 353 +LLG+ V G + +++ Y + +++ + A+ YA+ R V G L Q Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLTRQTD 340 Query: 354 ------------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA--YA 393 +M++A A+ + TA SF+ E + S + A Sbjct: 341 KTAPRVTITHHPDVRRSLMMQKAYAEGLRAVYLYTA-SFQDQVWTQEGDAESLDLAERVN 399 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 ++ PI K + A + ++++ +GGSG++++ I ++ R+S +S+ G+ +D Sbjct: 400 DLLLPIVKGVGSERASEQLIQSLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQSMD 459 Query: 454 VL 455 Sbjct: 460 FF 461 >gi|325000306|ref|ZP_08121418.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length = 589 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 32/327 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + + L+E + G+ +A IT++ + DG Y ++G K ++S + + Sbjct: 159 PMLEGRMHGTMCLSEPQAGSSLADITTRAEPAPDGTYRVTGTKMWISGGDHELGENIVHL 218 Query: 245 MLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 +LA+V G + FLVP++L DG N + + +K+G R L F + G Sbjct: 219 VLAKVPGGPAGVRGISLFLVPKILPDGRRNDVALAGVNHKMGYRGTVNTLLAFGESGG-A 277 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMR----VSLAEAIHYARRR---HVSGGILID 351 +G L + G L+ ++ + +G +++ YAR R +G Sbjct: 278 VGHLVGAEGQGLAAMFLMMNEARVGVGAGAAALACTGYLKSLDYARSRPQGRPAGEKDPS 337 Query: 352 QPVM--------KRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYA--RIMAPIT 400 P++ +R + A AL DE ++ + E A+ + PI Sbjct: 338 SPMVPIVRHADVRRMLLAQKSYAEGALALVLYCGRLVDEERTGPDPEEAHLLLETLTPIA 397 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LL 458 K W + A A++ GG GY E + +HYR++ N+I G+ D+L ++ Sbjct: 398 KSWPSQWGLEANALAIQVQGGYGYSREYDVEQHYRDNRLNAIHEGTHGIQAADLLGRKVV 457 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVIT 485 G F L + + +G +G T Sbjct: 458 MAGGAGFVALRNRIADTIGRAGADPAT 484 >gi|324999635|ref|ZP_08120747.1| acyl-CoA dehydrogenase domain protein [Pseudonocardia sp. P1] Length = 612 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 47/289 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQDDGTWHIEGVKRFITSAEQDFTENIMHLVLARPEGAKQGT 223 Query: 253 --VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEF----SNTFGFLLG 300 + FLVP+ E G NG +++K+G +++ T EL F + G+LLG Sbjct: 224 KGLSLFLVPKFHFDTQTGESGERNGAFVTNVEHKMGLKASTTCELTFGAHGTPAVGWLLG 283 Query: 301 DLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---DQPVM 355 D V G + +++ Y + ++ + A+ +A+ R V G L D+ Sbjct: 284 D--VHDGIAQMFQVIEYARMMVGTKAIGTLSAGYLTALEFAKER-VQGADLTQMTDKTAP 340 Query: 356 KRAIA---DI--ALDIAAATALSFRLANSF-----------DEAKSRSEEAAYA--RIMA 397 + I D+ +L + A A R ++ DE S E A ++ Sbjct: 341 RVTITHHPDVRRSLMLQKAYAEGMRAVYTYTATFQDRIRLGDEGGGVSTELAEKVNDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 PI K + A + ++++ +GGSG++++ +I ++ R++ +S+ G+ Sbjct: 401 PIVKGVGSERATEQLVQSLQTLGGSGFLQDYAIEQYIRDAKIDSLYEGT 449 >gi|291303470|ref|YP_003514748.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572690|gb|ADD45655.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 391 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 15/251 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D+A + ++ +K D +W ++ +S + + A + G + Sbjct: 131 LSEPEAGSDVAGMKTKAEKDGDAFVLNGAKRWITNAGVSRYYTVFAVTDPGKGAHGISAF 190 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDS 320 + D G+ + ++K+G + + T E+ F N +G + E KI + LD Sbjct: 191 VVDSEDEGVSFGAPEHKLGIKGSPTREVYFDNV---RVGADRLVGAENEGFKIAMRTLDH 247 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++++ V + + A Y + R G + D ++ +AD A+ ++AA L++ Sbjct: 248 TRVTIAAQAVGIGQGALDYAAGYVKERQQFGRAVADFQGVQFMVADAAMKLSAARQLTYT 307 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A AKS E+ A K + +A V +A++ +GG GY + + R R Sbjct: 308 AA-----AKSEREDDDLTFYGAS-AKCFASDVAMEVTTDAVQLLGGYGYTSDYPVERMMR 361 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 362 DAKITQIYEGT 372 >gi|254419280|ref|ZP_05033004.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196185457|gb|EDX80433.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 389 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 45/294 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + + PK+ S E+ +G L ++E G+D+ ++ ++ + D Sbjct: 112 TPEQKRKYLPKLISGEH--------------VGALAMSEAGSGSDVMSMRTRADRKGD-R 156 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC--FLVPRLLEDGSPNGLCYQRLKNKI 279 Y L+G K W ++P +D ++ A+ + G GC FL+ + ++ G + +K+ Sbjct: 157 YVLNGTKFWITNAPHADTLVVYAKSDPDAGSKGCTAFLIEKGMK-----GFSVSKKLDKM 211 Query: 280 GNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 G R + T EL F N G + G V ++ + ++ A + M+ +L Sbjct: 212 GMRGSDTAELVFEDCEVPEENIMGPVGGGAGVLMSGLDYERAVL----AAGPLGIMQAAL 267 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y R R G + +M+ +AD+ + + +A A + +A + D + +AA Sbjct: 268 DVVLPYVRDRQQFGRPIGSFQLMQGKVADMYVALNSARAYVYSVARACDAGLTTRYDAAG 327 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A ++A + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 328 AILLA-------SENAVKVTLEAVQALGGAGYTKEWPVERLVRDAKLYDIGAGT 374 >gi|17506239|ref|NP_491871.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis elegans] gi|14573994|gb|AAK68275.1|AC006625_7 Acyl coa dehydrogenase protein 1, isoform a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 427 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 34/273 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 ++E G+D A+ + ++ D + +SG K W +S + F++ A + + C Sbjct: 167 ISESGAGSDAFALKTIAKRDGDH-FLISGTKMWITNSGEAQVFVVFANADPSQKYKGITC 225 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V R S +GL + ++K+G R+++T ++ F N +LG+ + Sbjct: 226 FIVER-----SADGLTVDKEEDKLGIRASSTCQVHFDNVRVHKSAILGEYG------KGY 274 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K I L++ +++ + LA+ I Y ++R G LID ++ IA +I Sbjct: 275 KYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQIAQARTEI 334 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A + EAA A++ A ++A + A+ ++ +GG G+ + Sbjct: 335 EAARLLVYNAARMKEYGIPYVREAAMAKLFAS-------QVATSTSAQCVKWLGGVGFTK 387 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 E + YR++ I G+ N + + L++ Sbjct: 388 EFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLID 420 >gi|296170671|ref|ZP_06852246.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894660|gb|EFG74394.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 608 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP+ L D G NG+ L++K+G +S+ T E+ F T G+L+ Sbjct: 224 TKGLSLFYVPKFLFDPETFELGPRNGVFATGLEHKMGIKSSPTCEMTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 GD++ +E ++ I + +A +G +LA +A+ R V G Sbjct: 284 GDVHNGIAQMFTVIEHARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--- 395 ++ P ++R++ AL A D+ SR++ R+ Sbjct: 339 TAPRVTIMHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDTVAQHVSRADHEMAHRVDDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + A V+ E+++ +GGSG++++ + ++ R++ +S+ G+ LD Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDAKIDSLYEGTTAIQALDF- 457 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F + +D G + + V + +I C E Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATIDGCDE 486 >gi|291279846|ref|YP_003496681.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1] gi|290754548|dbj|BAI80925.1| acyl-CoA dehydrogenase [Deferribacter desulfuricans SSM1] Length = 592 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 33/268 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + DG Y L+G K F+++ +D F + A+V+ FLV Sbjct: 147 LTEPGSGSDALGAKATATLSEDGKYYILNGTKQFITNAGFADLFTVFAKVDKEHFTAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 R E G+ + K+G + ++T ++ +N LLG+ + G IL Sbjct: 207 ERTFE-----GVELGPEEKKMGIKGSSTRQVILNNCKVPVENLLGE--IGKGHKIAFNIL 259 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A+ + + +LAE I YA R G + +K ++D+ I A+ + Sbjct: 260 NVGRFKLGAAVTGAA--KFALAEGIKYANERKQFGRQISSFGAIKEKVSDMVAHIFASES 317 Query: 372 LSFRLANSFDEAKSRSEEAA-------------YARIMAPITKYWCCKMAPAVIAEAMEC 418 +RLA D+ + +++A YA I ITK + ++ V+ E ++ Sbjct: 318 AIYRLAGLIDDRIATIDKSAENYYELYQKAIEEYA-IECSITKVFPSEVLAKVVDEVVQI 376 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG G+I+E R YR+ N I G+ Sbjct: 377 FGGYGFIQEYPAERFYRDERINRIFEGT 404 >gi|301097310|ref|XP_002897750.1| short/branched chain specific acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] gi|262106771|gb|EEY64823.1| short/branched chain specific acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] Length = 423 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 38/289 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLA 247 P T+ LTE G+D A+ ++ +DG Y L+G K W + +D F+++A Sbjct: 152 PRLSTNTVGSFCLTEAESGSDAFALKTKADVSADGSHYTLNGEKMWISNVAHADVFLVMA 211 Query: 248 QVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 V+ +G CF+V R G+P GL + + K+G L S+T +L D+ Sbjct: 212 TVDPSLGYKGITCFIVER----GTP-GLSFGPPEKKLG--------LNASSTCSVILEDV 258 Query: 303 NVSTGPV-----EDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351 + V + I I L+ + ++ ++ +AE A+ Y R G + D Sbjct: 259 KIPKEKVLGKVGQGYAIAIGQLNEGRIGIAAQQLGIAEGAYRHAMPYLFERKQFGRAIGD 318 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 M+ A++AL++A+A L + A K E A MA K ++A Sbjct: 319 FQAMQHQYAELALELASARLLVYNAAR----LKDAGHEFVKASCMA---KLHASRVAERT 371 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ +E +GG G+ ++ + YR+ +I G+ N + + L+++ Sbjct: 372 SSKCIELLGGVGFSKQLMAEKFYRDCKVGTIYGGTSNVQLSTIARLVKQ 420 >gi|168183515|ref|ZP_02618179.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf] gi|237796654|ref|YP_002864206.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657] gi|182673364|gb|EDT85325.1| butyryl-CoA dehydrogenase [Clostridium botulinum Bf] gi|229263048|gb|ACQ54081.1| butyryl-CoA dehydrogenase [Clostridium botulinum Ba4 str. 657] Length = 379 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 24/269 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 GLTE GTD +A S D Y L+G K F+++ +D F++ A + G + Sbjct: 123 FGLTEPNAGTDASAQQSIAVLKGDH-YILNGSKIFITNGGAADTFVIFAMTDRSKGVKGI 181 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G P G + ++K+G R+++T EL F + LLG G MK Sbjct: 182 SAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D + ++ + +AE AI Y + R G L ++ IAD+ + + AA Sbjct: 239 L---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++ + +AA A++ A T + V ++++ +GG GY ++ Sbjct: 296 KYLVYKSAWKKSAGENYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + R R++ I G+ + + N L Sbjct: 349 LERMLRDARITEIYEGTSEVQKMVIANNL 377 >gi|322700771|gb|EFY92524.1| glutaryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102] Length = 427 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 29/257 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITS--QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ S + G + LSG K W +SP++D ++ A Sbjct: 154 MAKGKLLGAFGLTEPNHGSDPGSMESVARPHPTKKGYFSLSGAKTWITNSPIADVLLVWA 213 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 +++ G++ FLV R +D P L +K+K G R++ T ++ + D+ Sbjct: 214 KLQETGKIRGFLVER--KDCPPGTLSTPAIKDKNGLRASITGMIQLDECPVPEANMFPDV 271 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 GP L+SA +S G+ +L + I AR R+ G L +++ Sbjct: 272 EGLKGPFS------CLNSARYGISMGVMGALEDCIARARTYALERKQFKGNPLAKYQLIQ 325 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD A D A T + ++ DE K E M + K C +A Sbjct: 326 KKLADAATDAAYGTLAAIQVGRLKDEGKVTPE-------MISMVKRQNCDIALRNARILQ 378 Query: 417 ECIGGSGYIEERSIARH 433 E GG+ +E I RH Sbjct: 379 EIFGGNAVSDEYHIGRH 395 >gi|296394805|ref|YP_003659689.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985] gi|296181952|gb|ADG98858.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM 44985] Length = 382 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + ++ D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGRLATTARRDGDH-YVINGAKTYITSAVRADYVVTAARTGGEGSAGVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 ++ + + G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LIVVEKTAPGFIVSRALDKMGWRSSDTAELSYTDVRVPAANLVGAENTGFAQIAAAFVAE 242 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A+ + + + L A+ + R R G LI + ++ +A++A I A + + Sbjct: 243 RVVLAVQAYASAQRCLDLALQWCRDRSTFGRPLISRQSVQNTLAEMARRIDVAKVYTRHV 302 Query: 377 ANSFDEAKSRSE----EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A + A S + + +A+ A T W V +A++ GG GY+ E I R Sbjct: 303 A---ERAASGDQDLIAQVCFAKNTAVETGEW-------VANQALQLFGGLGYMAESEIER 352 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 YR+ + +G G +L L Sbjct: 353 QYRD--MRILGIGGGTTEILTTL 373 >gi|221066398|ref|ZP_03542503.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220711421|gb|EED66789.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 606 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 65/344 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +T ++ AL+T + + + K+ + E+ T + LTE + G+ Sbjct: 124 LCPLLTDGAIEALLTAGSDALKSTYLEKLVTGEWTGT-------------MNLTEPQAGS 170 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLV 258 D+A + ++ + DG Y + G K F++ M+D + +LA+V G + F+V Sbjct: 171 DLALVRTRAEPQGDGSYKVFGTKIFITYGEHDMADNIVHLVLARVAGAPEGVKGISLFVV 230 Query: 259 PRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN-------------TFGFLLG 300 P+ L +DGS N + +++K+G +++ T L+F + G+L+G Sbjct: 231 PKFLVNQDGSLGKRNDVHCVSIEHKMGIKASPTAVLQFGDGTAASIADSAGPGAVGYLVG 290 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRR----HVSGGI----- 348 + N +E M I++ + + G+ V+ A+ YA+ R V G + Sbjct: 291 EENRG---LEYMFIMMNAARYAVGLQGLAVAERAYQHAVAYAKERVQSRPVDGSVKASAT 347 Query: 349 LIDQPVMKRAIADIALD------IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 +I P ++R + + +A A A ++ A+ + + R + M P+ K Sbjct: 348 IIHHPDVRRMLMTMRASNEGCRAMATAAAAAYDAAHHHPDVEVRQANQTFYEFMVPLVKG 407 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +M+ V + ++ GG G+IEE A++YR++ +I G+ Sbjct: 408 YSTEMSLEVTSLGVQVHGGMGFIEETGAAQYYRDAKILTIYEGT 451 >gi|88811721|ref|ZP_01126975.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] gi|88791112|gb|EAR22225.1| Acyl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] Length = 390 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 21/239 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D +TS QK+ G Y +SG K W SP++D ++ A+++G + F++ Sbjct: 135 FGLTEPDHGSDPGGMTSHAQKVRGG-YRVSGAKSWITHSPIADVLVIWAKLDGEIRGFIL 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316 R + GL +++ K R++ T ++ F L V GP + Sbjct: 194 ERDM-----TGLETPKIEGKFALRASVTGQIHMDEVFVPEANALLVEGLKGPFSCLSKAR 248 Query: 317 YLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 Y I+ S+ A Y+ R G L ++++ +AD+ +I + Sbjct: 249 Y---GIIWGSMGAAEFCWQAARRYSLERTQFGRPLAANQLIQKKLADMQTEITLGLQAAL 305 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL D + +A M + K C A + A + GG+G ++E + RH Sbjct: 306 RLGRLIDADR-------WAPEMVSLLKRNNCGKALEIARTARDIHGGNGIVDEYHVIRH 357 >gi|321313267|ref|YP_004205554.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5] gi|320019541|gb|ADV94527.1| acyl-CoA dehydrogenase [Bacillus subtilis BSn5] Length = 379 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 39/285 (13%) Query: 194 TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 T +A+G LTE G+D ++ + ++I D Y L+G K F+++ ++D +I+ A Sbjct: 112 TQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDD-YVLNGSKVFITNGGVADIYIVFA 170 Query: 248 QVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + + F+V + E G + + K+G RS+ T E+ F + L Sbjct: 171 VTDPEKKKKGITAFIVEKDFE-----GFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225 Query: 300 GDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 G+ E KI + LD ++ V +A+ A+ YA+ R G + +Q Sbjct: 226 GEEG------EGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+A I A+ L+++ A + +A +++MA T A V Sbjct: 280 GVAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDT-------AMKVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 EA++ GG GY ++ + R+ R++ I G+ L + +L Sbjct: 333 EAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISKML 377 >gi|313891664|ref|ZP_07825271.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E] gi|313119942|gb|EFR43127.1| acyl-CoA dehydrogenase [Dialister microaerophilus UPII 345-E] Length = 378 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 19/265 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LTE G+D A+ QK+ DG Y L+G K F+++ +++ ++ + G + Sbjct: 121 FALTEPGAGSDAGAVACYAQKV-DGGYILNGTKCFITNGSIAEKIVVFTNTKKTGGIRGL 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG----DLNVSTGPVED 311 + D + G+ + ++K+G R++ T E+ F + F LG ++ +E Sbjct: 180 TAFIVDSNSKGVSIGKEEDKMGIRASTTSEIIFEDCFVPESSRLGREGMGFKIAMKTLEK 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ +SV + SL A+ YA +R G + +++ IAD+ + +A A Sbjct: 240 SRPVV----GALSVGIAQASLESAVRYAHQRKQFGSKISSFEMVQDMIADMVIKTESARA 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + D + I +P+ K + +A V +++ +GG+GY +E Sbjct: 296 LVQKACWMLD------NDMPSKGIFSPMAKAYASDVAMEVSTISVQVMGGNGYSKENPNE 349 Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456 ++ R++ I G+ + + N Sbjct: 350 KYMRDAKVMQIYEGTNQVQKIVIAN 374 >gi|228917951|ref|ZP_04081487.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841748|gb|EEM86859.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|226360967|ref|YP_002778745.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226239452|dbj|BAH49800.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 32/287 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236 + E P T +G +G+TE G+D+ AI + I DG Y ++G K F++ Sbjct: 104 YGTEEQKKTWLPGMATGEILGAIGMTEPGAGSDLEAIKTTA--IRDGDEYVINGSKTFIT 161 Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + S I+LA + + + G V L+ D P G R+ +K+G T EL F++ Sbjct: 162 NGASADMIVLAVKTDPKAGAKGVALLIVDLRDCP-GFAVGRVLDKVGQHGADTSELSFTD 220 Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 LLG+ G + + L + M ++ + + Y + R G L Sbjct: 221 VRVPVSNLLGEERQGFGQLMAQLVQERLIIGAQASGAMNRAVEDTVAYTKSRQAFGHSLF 280 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD---EAKSRSE----EAAYARIMAPITKYW 403 + + A ++A ++ A D EA R E EAA + KYW Sbjct: 281 E-------FQNTAFELAECQTIARTCAVFLDHCIEAHLRGELDPSEAA-------MVKYW 326 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + AVI ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 327 LTEQQCAVIDRCVQLHGGYGYMREYLIARMYEDARVQKIYAGANEVM 373 >gi|156742430|ref|YP_001432559.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156233758|gb|ABU58541.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 381 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 27/289 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T H+ W P S E + +TE G+D+AAI + + D Y Sbjct: 104 TSEQHRRWLPGCVSGE-------------CITAIAMTEPGAGSDLAAIRTTALRDGDA-Y 149 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284 L+G K F+S+ ++D I+ A+ + G V L+ E G P +RL+ KIG + Sbjct: 150 VLNGQKTFISNGILNDLVIVAAKTDPDRGAKGVSLLVVERGMPGYERGRRLE-KIGLHAQ 208 Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T EL F N LLG+ + + L A+ +V+ +L + I Y R Sbjct: 209 DTAELFFHNVRVPRENLLGEEGQGFRYLMEQLPRERLAIAVGAVAAAETALEQTIRYCRE 268 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R V G L ++ +A++A ++ + + + + +E AA A K Sbjct: 269 REVFGRPLGALQTVRFTLAELATEVQIGRVFVDQCVLALNRGELTAETAAMA-------K 321 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 +W ++ V+ ++ GG GY+ E IAR + ++ +I G+ M Sbjct: 322 WWTTELQQRVVGACLQLHGGYGYMREYPIARAFLDARVQTIYGGTTEIM 370 >gi|145594789|ref|YP_001159086.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145304126|gb|ABP54708.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length = 380 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E +GG+D A +T++ + +G Y +SG K W + ++D + + + G G + Sbjct: 126 LSEPQGGSDAAHLTTR--AVPEGEEYIVSGTKAWITHAHVADFYNIFCRTGG-AGARGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL D + G+ Q + +G ++ ++ F T L+G G + Sbjct: 183 CLLADRNMPGIEPQLAERTMGLHASPVAQVVFDGTRVPAERLIGGEGKGFGIA-----MS 237 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ V LA+A + YAR R G ++D + +AD A I+AA A Sbjct: 238 ALDSGRLGIAACAVGLAQAALDYAVGYARERQQFGRAIVDFQGLGFLLADAATQISAARA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + S EAA A++ A +A V +A++ +GG+GY+ + + Sbjct: 298 LMLAAARLRDAGRPYSIEAAKAKLFA-------TDVAMRVTTDAVQVLGGAGYVADHPVE 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ RE+ I+ G+ L + L KG Sbjct: 351 RYMREAKVLQIVEGTNQIQRLVISRALAKG 380 >gi|308177362|ref|YP_003916768.1| acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117] gi|307744825|emb|CBT75797.1| putative acyl-CoA dehydrogenase [Arthrobacter arilaitensis Re117] Length = 382 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 26/261 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEG---RVGC-- 255 LTE G+D+ A+ ++ + D + +SG K F+ ++ DA ++LA+ +G R G Sbjct: 128 LTEPGAGSDLRAVRTKAVRDGDD-WLISGQKTFIGNAAFGDASLVLARTDGESSRAGAHS 186 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 F+V R +G NG + +K+G R++ T EL F + L+G++ V Sbjct: 187 FSLFMVER--SEGYSNGKPF----DKMGLRASDTAELFFDEVRVSATDLVGEVGQGLSYV 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L A+ + + S +A+ + + R G +L + + +AD+ + Sbjct: 241 KAQLPQARLALAVAASAICSASFEQALEHTKNRSTFGQVLTEYQNTRFELADLKTEAHVT 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R +F+E + + +AA ++ W + A + +A++ GG GYI E Sbjct: 301 QSFVDRAVLAFNEGELNASDAAEVKL-------WASESAKKLSDKALQLHGGYGYIMEYP 353 Query: 430 IARHYRESPANSILLGSGNAM 450 IA+ + S +I G+ M Sbjct: 354 IAQSFTASRLLTIFGGTSEIM 374 >gi|296392631|ref|YP_003657515.1| acyl-CoA dehydrogenase [Segniliparus rotundus DSM 44985] gi|296179778|gb|ADG96684.1| acyl-CoA dehydrogenase domain protein [Segniliparus rotundus DSM 44985] Length = 611 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 56/327 (17%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K W I + +D T + LTE G+D+ A ++ + DG + + G Sbjct: 146 QKQWCKVIAEQNWDAT-------------MVLTEADAGSDVGAGRTKAVEQPDGTWHIEG 192 Query: 231 HKWFLSSPMS-DAF-----IMLAQVEG-RVGC-----FLVPRL------LEDGSPNGLCY 272 K F+S S D F ++LA+ EG R G F VP+ E G NG+ Sbjct: 193 VKRFISGATSGDLFDNIFHLVLARPEGARAGTKGLSLFFVPKWHYDFEKRERGERNGVFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 L++K+G +++ T EL F G+L+G ++ + D+ + I S + + Sbjct: 253 TNLEHKMGIKASTTCELAFGQHGIPAVGWLVGGVHDGIAQMFDVIENARMTVGIKSTATL 312 Query: 329 RVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFR 375 A+ +A+ R V G ++ P ++R++ + AL Sbjct: 313 STGYLNALEFAKER-VQGSDFTQMLNKDAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLL 371 Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A D A ++ E+ AY + PI K + + A +A++++ GGSG++++ Sbjct: 372 AAAYQDPAVAQRLFGADEDLAYRVNDFLLPIVKGFGSEQGYAHLADSLQIFGGSGFLQDY 431 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455 I ++ R++ +++ G+ LD Sbjct: 432 PIEQYIRDAKIDTLYEGTTAIQSLDFF 458 >gi|302381653|ref|YP_003817476.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264] gi|302192281|gb|ADK99852.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 396 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 29/265 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P IG GLTE GG+D A++ ++ K+ DG Y L+G K W + Sbjct: 120 FGNEEQKMRFLPRMAAGELIGCFGLTEADGGSDPASMKTKAVKV-DGGYRLNGGKYWITN 178 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D I+ A+++ + F+V R E G ++ +K+ R++ T ++ ++ F Sbjct: 179 SPIADLAIVWAKLDDVIRGFIVERGFE-----GFTTGKIGDKLSLRASITGDIGLNDVFV 233 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 LL + GP L+ A +S + AE +A R +V +L +P Sbjct: 234 PEANLLPGVKGLRGPFS------CLNKARYGISWGAMGAAEFCLHATRDYVGERMLFGRP 287 Query: 354 -----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 ++++ +AD+ +I ++ L D A+ + K C A Sbjct: 288 LSSRQLVQKKLADMQTEIFLGFEGAYALGRLLD-------TGAFVPEAISLMKRNNCGKA 340 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 A+ EA + GG+G E + RH Sbjct: 341 LAIAREARDMHGGAGITGELHVMRH 365 >gi|228930351|ref|ZP_04093355.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228949063|ref|ZP_04111335.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810636|gb|EEM56985.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829337|gb|EEM74970.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 381 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|171060874|ref|YP_001793223.1| acyl-CoA dehydrogenase domain-containing protein [Leptothrix cholodnii SP-6] gi|170778319|gb|ACB36458.1| acyl-CoA dehydrogenase domain protein [Leptothrix cholodnii SP-6] Length = 376 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE G++ + + + D Y L G K F++S D I++A Sbjct: 111 PLARGEMLGAFCLTEPHVGSEAGGLKTTAVRDGDH-YVLDGVKQFITSGQHGDVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G FLVP S G RL++K+G S+ T ++ F + LG Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYTVARLEDKMGQHSSDTAQINFDQCRIPASYRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + L ++ +E +I I A SV R + A+ Y++ R G + + ++ Sbjct: 225 EEGQGLKIALSGLEGGRIGI----ASQSVGMARAAFEAALAYSKDRIAFGTAIFNHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A+ I AA L + A+ D +EAA A++ A +MA V + A+ Sbjct: 281 FRLADMAMQIEAARQLIWHAASLKDAGLPCLKEAAMAKLFAS-------EMAEKVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QTFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|268568112|ref|XP_002640162.1| Hypothetical protein CBG12664 [Caenorhabditis briggsae] gi|187029266|emb|CAP31609.1| hypothetical protein CBG_12664 [Caenorhabditis briggsae AF16] Length = 420 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/280 (21%), Positives = 125/280 (44%), Gaps = 24/280 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T L+E G+D ++ + +K D + ++G K W +S +++ ++ A Sbjct: 148 PKSVTGSVGSFALSEVSAGSDAFSLKTVAKKDGDD-FVINGSKMWITNSGHAESLLLFAN 206 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + G + + D GL + ++K+G R+++T + F N +LG+ Sbjct: 207 ADVSKGYKGITCFMLDIKTKGLTVGKKEDKLGIRASSTCPIHFDNVRVHKSAILGEFG-- 264 Query: 306 TGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 + K I L++ + + + LA E I Y ++R G +ID ++ I Sbjct: 265 ----KGYKYAIECLNAGRIGIGAQMLGLADGCFNETIPYLQQREQFGQRIIDFQGLQHQI 320 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A I +I AA L + A ++ EAA A++ + ++A ++ +E + Sbjct: 321 AQIRTEIEAARLLVYNAARMKEQGLPFVREAAMAKL-------YASQVATNTTSKCVEWL 373 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 GG G+ ++ + ++YR+ +I G+ N + + L++ Sbjct: 374 GGVGFTKDFPVEKYYRDCKIGTIYEGTSNIQLNTIAKLID 413 >gi|313106540|ref|ZP_07792768.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310879270|gb|EFQ37864.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 382 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 11/256 (4%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 + L +TE GG+D+A + ++ + D Y +SG K F++S + + +A G G Sbjct: 125 MALAVTEPSGGSDVANLKTRAVRDGDH-YRVSGSKTFITSGVRADYYTVAVRTGGEGFAG 183 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL + G R K+G ++ T EL F + L+G N + Sbjct: 184 ISLLLVEKGTAGFNVGRKLKKMGWWASDTAELFFDDCRVPAENLIGVENAGFACIMANFQ 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+M+ +++L E++ +AR R G + V++ +A++A + + ++ Sbjct: 244 SERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRLAEMATQLEVSREFTY 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A KS +E + A K + +A + +A++ +GG GY+ E + R Y Sbjct: 304 RQAAKMAVGKSVIKEISMA-------KNFATDVADRLTYDAVQVLGGMGYMRESLVERLY 356 Query: 435 RESPANSILLGSGNAM 450 R++ SI GS M Sbjct: 357 RDNRILSIGGGSREIM 372 >gi|302342407|ref|YP_003806936.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301639020|gb|ADK84342.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 380 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 39/270 (14%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA------QVEGRVGC 255 TE GTD+A ++ K G Y ++G K F+++ + D F++ A + R Sbjct: 125 TEPNAGTDVAGYGTRAVK-DGGDYIINGQKMFITNGTVCDFFLVQAITNPENKRHARFSQ 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--- 312 +VP G+ ++ K+G RS+ T E+ F D+ V + + Sbjct: 184 IIVP-----ADAPGVTRTKIHGKMGIRSSNTAEISFE--------DVRVPQSNLVGVEGR 230 Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIAL 364 +++ + D+ ++ + L++A Y+R R V G L + ++ +A++A+ Sbjct: 231 GFYQLMHFFDTTRPMIAAQALGLSQACLDTSARYSREREVFGAPLGSFQLTQKKLAEMAI 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I A L++R D AA A+ T +C +A+E GG GY Sbjct: 291 RIEALRGLTYRACWLIDNGTPDYTLAAMAKYYGGETAVFCAD-------KAVEIHGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454 IEE + + YR++ + G+ A ++ + Sbjct: 344 IEEYPVQKWYRDAKILELYEGTKEAEIMTI 373 >gi|294341460|emb|CAZ89877.1| Isovaleryl-CoA dehydrogenase [Thiomonas sp. 3As] Length = 392 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 127/278 (45%), Gaps = 25/278 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + DG + L+G K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMKLRADRRGDG-FVLNGSKMWITNGPDADVLVVYAKTDPAASSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 187 TAFLVEKDFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPADNVLGELN---GGVKVLMSG 243 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ V M+ + + Y R G + + +++ +AD+ + AA +L Sbjct: 244 LDYERAVLAAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMYTVLQAARSL 303 Query: 373 SFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + D + +RS A ++ WC + A + E ++ GG+GYI + Sbjct: 304 LYTVGKNLDALGDGHARSVRKDCAAVI-----LWCAEKATWMAGEGIQIFGGNGYINDYP 358 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R +R++ I G+G + + +L G LF Q Sbjct: 359 LGRLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390 >gi|290961610|ref|YP_003492792.1| acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] gi|260651136|emb|CBG74257.1| putative acyl-CoA dehydrogenase [Streptomyces scabiei 87.22] Length = 383 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 57/308 (18%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 A VA + W P + + EY +G GLTE G+D +T++ Sbjct: 95 AKTVAAWGDEEHKRRWLPGLTAGEY--------------VGCFGLTEPGTGSDAGNLTTR 140 Query: 218 GQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLC 271 + G + +SG K F+++ +D ++ A+ G FLVP GL Sbjct: 141 AVR-DGGDFVISGTKTFITNGTWADVVLLFARSTDAPGHQGISAFLVPT-----DTPGLR 194 Query: 272 YQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDSAI----M 323 + + K+G R T EL +L ++ V GP + K SA+ M Sbjct: 195 RRAIHGKLGLRGQTTAEL--------VLEEVRVPASALLGP--EGKGFTVAMSALAKGRM 244 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 SV+ V +A+A + YA R G + +++ I DIA+D+ AA L++R+A+ Sbjct: 245 SVAAGCVGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELITDIAVDVDAARLLTWRVAD 304 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 D + + EA+ A++ A + A A++ GG GYI+E + R++ Sbjct: 305 LVDRGQPFATEASKAKLFA-------SEAAVRAANNALQVFGGYGYIDEYPAGKLLRDAR 357 Query: 439 ANSILLGS 446 ++ G+ Sbjct: 358 VMTLYEGT 365 >gi|15806554|ref|NP_295267.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6459305|gb|AAF11106.1|AE001998_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1] Length = 422 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 36/265 (13%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252 GLTE G+D + S ++ DG + L+G K F++ ++ +++LA+ EG+ Sbjct: 156 GLTEPGSGSDSGGMFSNAKEQPDGSWILNGSKNFITQGSVAGTYVVLARTDPAREGKGKN 215 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 + F+ R G R ++K+G RS+ T +L F + LLG+ + Sbjct: 216 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFK 271 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG-ILIDQPVMKRAIAD 361 V M++ LD + ++ M + L A YA RH G I +Q + R +AD Sbjct: 272 DV--MRV---LDGGRVGIAAMGLGLGRGAYEYAARYALGRHQFGKPIAYNQNIAFR-LAD 325 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 I + AA L + A+ D ++ + A A++ A + C EA++ +GG Sbjct: 326 IDTKLEAARLLIRKAADLKDAGQNFTVPVARAKLYATVVGVEACD-------EAIQMLGG 378 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GYI+E + R +R++ I G+ Sbjct: 379 YGYIKEYPVERMWRDNRLTRIGEGT 403 >gi|319440934|ref|ZP_07990090.1| acyl-CoA dehydrogenase [Corynebacterium variabile DSM 44702] Length = 399 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 17/246 (6%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP+ + +TE G D+A I + K +G + L+G K F+S+ + F ++ Sbjct: 119 APLCSGEKIGAIAMTEPGAGADLAGIRTTALKNDEGNFVLNGSKTFISNGVQADFTLVVA 178 Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + +GR G + L+ D G K+G ++ T EL F N +LG+ Sbjct: 179 ITDPSQGRAGVSI---LIVDAETEGFTKTGPLKKVGLKAQDTAELNFENAVVPAENVLGE 235 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + + A+ S++ R + +++ R G L+D + +A Sbjct: 236 EGAGFGYLRTNLAQERVSIAVGSIATSRRAFDLVYQHSQDRKTFGNRLVDHQAYRWELAK 295 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I +A + ++ EAK + E + A + KY ++ V+ A++ GG Sbjct: 296 MATEIQSAQS----FVDAAVEAKVKGE---LDEVTASMAKYLTTELQIKVVNTALQLHGG 348 Query: 422 SGYIEE 427 G++ E Sbjct: 349 YGFMME 354 >gi|311271975|ref|XP_001926332.2| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Sus scrofa] Length = 431 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 28/259 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ K D Y ++G K W S+ + F+++A V+ +G C Sbjct: 175 LSEPSAGSDSFSLKTRADKDGD-YYVINGSKMWITSAEDAGLFLVMANVDPALGYKGITC 233 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV R E GL + +NK+G R+++T + N + + N+ K Sbjct: 234 FLVDRDTE-----GLRVGKPENKLGIRASSTCPVTLENA---KVPEANIVGQIGHGYKYA 285 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ + LA+ I Y + R G + D ++ +A A + AA Sbjct: 286 IQSLNKGRIGIAAQMLGLAQGCFDLTIPYLKERVQFGKRIFDFQGLQHQVAHTATQLEAA 345 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A + + +EA+ A KY+ ++A + +E +G GY ++ Sbjct: 346 RLLTYNAARLLEAGRPFIKEASMA-------KYYASEVAIQTTNKCIEWMGAVGYTKDYP 398 Query: 430 IARHYRESPANSILLGSGN 448 + +++R++ +I G+ N Sbjct: 399 MEKYFRDAKIGTIYEGTSN 417 >gi|302671840|ref|YP_003831800.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316] gi|302396313|gb|ADL35218.1| butyryl-CoA dehydrogenase Bcd [Butyrivibrio proteoclasticus B316] Length = 386 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 25/271 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD + ++ DG + L+G K F+++ ++D +I++A Sbjct: 113 PLAKGEKLGAFGLTEPMAGTDAQGVQTKAVLSEDGKEWILNGSKCFITNGEVADIYIIIA 172 Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + GR ++E G+P G + +NK+G R ++T EL F + + Sbjct: 173 YTDIVEDKKGRKQKKFSAFIVEKGTP-GFTFGTKENKMGIRGSSTYELIFQDCH---IPA 228 Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355 N+ + I ++ LD + ++ + +AE + Y + R G + Sbjct: 229 ENLLGARGKGFPIAMHTLDGGRIGIAAQALGIAEGALDRTVEYVKERKQFGRAIGAFQNT 288 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A++A AA L ++ A++ S EAA A++ A ++A V +A Sbjct: 289 QFQLANMATQCEAARLLVYQAADAKKNKDVYSVEAAKAKLFA-------AEVAMDVTTKA 341 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GYI E + R R++ I G+ Sbjct: 342 VQLHGGYGYIREYEVERMMRDAKITEIYEGT 372 >gi|258645297|ref|ZP_05732766.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470] gi|260402647|gb|EEW96194.1| acyl-CoA dehydrogenase [Dialister invisus DSM 15470] Length = 378 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 33/272 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D A++ + +K+ G Y L+G K F++ +P++D + A G + Sbjct: 121 FALTEPGAGSDAGAVSCRAEKVEGG-YILNGTKCFITNAPIADKITLFANTREGGGIRGL 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLG--DLNV 304 L D G+ + ++K+G R++AT E+ F + F GF++ L + Sbjct: 180 TVFLVDADTKGISIGKEEDKMGIRASATAEVIFEDCFVPDSARVGKEGRGFMIAMQTLQM 239 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 S PV A +SV + ++ A+ Y+ R G + ++++ IAD+ + Sbjct: 240 SR-PV----------VAAISVGIAQAAIEAAVAYSHHRKQFGVKIATFEMVQQMIADMVM 288 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA L+++ ++ + A + + ++K + A V A++ +GG+GY Sbjct: 289 KTEAARILTYK------ACVAQMNKDKKAGLYSAMSKCFASDTAMEVTTTAVQVMGGNGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLN 456 E + ++ R++ I G+ L + N Sbjct: 343 SRENPVEKYMRDAKIMQIYEGTNQVQRLVIAN 374 >gi|85712005|ref|ZP_01043059.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145] gi|85694191|gb|EAQ32135.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145] Length = 385 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 26/262 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + +K D Y L+G K F+S S D +++A+ G G + Sbjct: 124 LTEPGSGSDAASLRTSAKKEGDE-YVLNGSKMFISGAGSTDVMVVMART-GEAGPKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316 + G+ Y + ++K+G + T + F + LLGD E K ++ Sbjct: 182 FVVPADAKGISYGKKEDKMGWNAQPTRLVTFEDVRIPAKNLLGDEG------EGFKFAMM 235 Query: 317 YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD A+ SV + +L A Y R G L ++ +AD+A ++ AA Sbjct: 236 GLDGGRINIAVCSVGTAQAALETASAYMHERSQFGKPLAAFQALQFKLADMATELVAARQ 295 Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + A+ D ++ A A+ A + C EA++ GG GYI+E + Sbjct: 296 MVRLAASKVDNNDPDKTTYCAMAKRFATDIGFQVCN-------EALQIHGGYGYIKEYPL 348 Query: 431 ARHYRESPANSILLGSGNAMVL 452 RH R+ + IL G+ M L Sbjct: 349 ERHVRDVRVHQILEGTNEVMRL 370 >gi|114566326|ref|YP_753480.1| butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337261|gb|ABI68109.1| Butyryl-CoA dehydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 380 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/276 (23%), Positives = 128/276 (46%), Gaps = 35/276 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D I ++ K D Y L+G K F+S+ + + +LA ++ ++G + Sbjct: 124 LTEPGAGSDAGGIATRCVKSGDE-YILNGSKQFISNGGTAGVYTVLATLDKKMGTKGMCA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------- 313 + D + G+ + ++K+G R++ T E+ F D+ V P +++ Sbjct: 183 FIVDRNTPGITVGKTEDKLGIRTSNTTEVIFE--------DVRV---PAKNLLGTEGQGF 231 Query: 314 --ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 I+ LD + S++ M +++A + Y++ R G + ++ +AD+A+ I Sbjct: 232 YIIMKTLDLSRASIAAMATGVSQACLDASLEYSKLRTQFGKPICSFQAIQFKLADMAMRI 291 Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A+ L ++ D R S+ A+ A+ A T +C EA++ GG GY Sbjct: 292 EASRLLYLEASSLQDMNVPRFSKAASLAKAYAGDTAVFCA-------TEAVQVFGGYGYT 344 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 ++ + ++YR++ I G+G L + L +G Sbjct: 345 KDYPVEKYYRDAKIFQIYEGTGEVQRLVIAGDLLRG 380 >gi|328876781|gb|EGG25144.1| putative acyl-CoA oxidase [Dictyostelium fasciculatum] Length = 433 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 27/257 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ--VEGRVGCF 256 GLTE G+D + + + +K+ +G + L+G K W ++P +D I+ A+ ++ F Sbjct: 175 FGLTEPLAGSDASGLLCEARKVDNG-WILNGEKRWIGNAPFADIIIVWARDTESKKIKGF 233 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD-------LNVSTGPV 309 +V E G+P GL + + NKI R + F L+ D + ++GP Sbjct: 234 IV----EKGTP-GLNVETINNKISLRMVQNGHIYFKEC---LISDDQRLPNANDFNSGPG 285 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + L + +A +S+ + Y + R G L +++ + + ++ A Sbjct: 286 KCL-FLTRIMAAWISLGVAANAYESCFKYVQSRKQFGTPLSKFQLIQERLVKMLGNLQAM 344 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T + R+++ FD+ K +Y +I + K +C +++ A EC+GG+G + + Sbjct: 345 TLMCLRVSHLFDQQK-----LSYGQI--GLLKAYCTSHGREIVSLARECVGGNGIVTDYG 397 Query: 430 IARHYRESPANSILLGS 446 +AR + + A GS Sbjct: 398 VARSFVDMEAIHTFEGS 414 >gi|319763240|ref|YP_004127177.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317117801|gb|ADV00290.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 388 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254 LTE G+D A+I ++ + + G Y ++G K F+S S ++L G + Sbjct: 124 LTEPGSGSDAASIKTRAELVG-GEYVINGGKAFISGAGSTHVLVLMARTGDAQSGAAGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP L G+ Y + + K+G S T ++ F N + N+ E KI Sbjct: 183 AFAVPADLP-----GIHYGKKEEKMGWNSQPTRQISFDNV---RIPAQNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +LA A Y + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + RLA S +A +R A + K + V+ EA++ GG GYI E Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 + R R++ + IL G+ M Sbjct: 349 PLERLLRDARVHQILEGTNEIM 370 >gi|332306391|ref|YP_004434242.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173720|gb|AEE22974.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 600 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 38/298 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ + ++ K DG Y L+G K F+S+ D I++A++ EG Sbjct: 164 LTESHCGSDLGMLKTKAVKNDDGSYSLTGTKIFISAGEHDMSENIVHIVIARLPDAPEGT 223 Query: 253 VGC--FLVPRL-----LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----D 301 G F+VP+ E+ N + +++K+G + +AT + F G+L+G Sbjct: 224 KGISLFVVPKFNVSADGENEDRNAVTCGSIEHKMGIKGSATCVINFDGAKGYLVGTENRG 283 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--------GILIDQP 353 LN + +I L+ S + + +LA A + R + G +I P Sbjct: 284 LNCMFTFMNSARIGTGLEGLASSETAFQGALAYAKDRVQFRSMKGVQNPDGPADPIIVHP 343 Query: 354 VMKR--------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 ++R A + AL I A + L S DEA + EA A + PI K + Sbjct: 344 DVRRMLLTQKAFAEGNRALAIYAMKLVDITLY-SKDEAAKQISEAKLA-FLTPIVKAFLT 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + A + M+ GG G+I+E + + R++ ++ G+ +D+L G+N Sbjct: 402 ETAQESTSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAIDLLARKIVGSN 459 >gi|294632956|ref|ZP_06711515.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292830737|gb|EFF89087.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 392 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 29/261 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 PM + + LTE G+D + + + ++G + +SG K F++ +P++D F+ A+ Sbjct: 118 PMAEGACLASFALTEPEAGSDPSGMRTTATWSAEG-WSISGQKRFITNAPLADLFVTFAR 176 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 V +G++ FLVP GL K+G T ++ F +G Sbjct: 177 VRGTEADGKIAVFLVP-----AGSAGLTVGPKDRKMGQEGATTADVYFDAV---RVGHDA 228 Query: 304 VSTGPVED--MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356 + +G VE + L + +S + LA E++ Y+ + G D+ +++ Sbjct: 229 LISGEVETGFRAAMTVLARGRVHISALATGLAERALDESVRYSAQNRQGGVPTGDRQLVQ 288 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ + A AL+ A + + R RI K +C + A A+ Sbjct: 289 AMLAEQQALVLAGKALARDTARKYLDGSDR-------RIAPSAAKLFCTEAAGRAADLAV 341 Query: 417 ECIGGSGYIEERSIARHYRES 437 + GGSGY+ E ++ R YR++ Sbjct: 342 QVHGGSGYMREVAVERIYRDA 362 >gi|212534364|ref|XP_002147338.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei ATCC 18224] gi|210069737|gb|EEA23827.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei ATCC 18224] Length = 431 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 31/264 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E + Sbjct: 165 LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 223 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F LLG+LN +K+L Sbjct: 224 SAFIVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 277 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R + +++ +AD+ +AA+ Sbjct: 278 MEGLDLERLVLSAGPLGIMQSALDLVLPYTHTRKQFNTPIAHNQLIQGKLADMYTKLAAS 337 Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ A S DE+ + R+++ A A + A C +A++ +GG+ Sbjct: 338 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 390 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI E R R++ I G+ Sbjct: 391 GYINEIPAGRLLRDAKLYEIGAGT 414 >gi|126640779|ref|YP_001083763.1| glutaryl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 375 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 91 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 149 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G GL + K+G R++ T E+ N Sbjct: 150 SPIADVFVVWAKEVSAEGNVGD-IRGFILEKGW-EGLSAPAIHGKVGLRASITGEIVMDN 207 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 208 VFVPEENAFPEIRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQF 261 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 262 GRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTS-------LIKRNNC 314 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 315 GKALDIARMARDMMGGNGISDEFGVARH 342 >gi|118591104|ref|ZP_01548503.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] gi|118436180|gb|EAV42822.1| Acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] Length = 391 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D I+ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKMWITNGPSADTMIIYAKTDPEAGPKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + S G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLVEKSFPGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGQVGKGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A +V M+ ++ I Y R G + +++ +AD+ + + A + Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYIHEREQFGQPIGTFQLVQGKVADMYVTMNATKS 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A + A + +A++ +GG+GYI E Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYA-------AENATKLALDAIQLLGGNGYINEYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|116694436|ref|YP_728647.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] gi|113528935|emb|CAJ95282.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] Length = 400 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 40/256 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252 LTE G+D ++ + ++ D Y L+G K F++ +P++D F + A+ Sbjct: 122 FALTEPEAGSDATSLQTTARQDGDH-YVLNGSKCFITNAPIADLFTVFARTNPDTPGAHG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FL+ R G+P GL + K+G + ++ L D V + Sbjct: 181 ISAFLIER----GTP-GLSTSEPERKMGQHGSPVGDV--------YLKDCRVPASAIVGG 227 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 K + +A+ +++ R++LA E + YA +R G + D ++++ IA Sbjct: 228 KPNVGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRYAAQRRQFGKPIADYQLVQQMIA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D ++ AA AL A D + + EA+ + K + +M+ V A++ G Sbjct: 288 DSNTELHAARALVLDTARKRDAGEDVTMEAS-------MCKLFASEMSGRVADRAVQVFG 340 Query: 421 GSGYIEERSIARHYRE 436 GSGY+ R YR+ Sbjct: 341 GSGYMARTVAERFYRD 356 >gi|262279186|ref|ZP_06056971.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259537|gb|EEY78270.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 607 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 71/366 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 165 LSEPQAGSSLADIRTRAIKTEDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283 Query: 292 -SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + G L+G+ L + + +I + L +A + +G A+ YA+ R V G Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKNR-VQG 338 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388 LI ++R + ++ A AL A +S ++A+ R++ Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQ 398 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 399 ANQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458 Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 LD+L L +G + L E++ +T+ Q K L+D + L + Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTITQ------AKAEPSLKDHADHLAQKWQLIQ 512 Query: 503 FLTEKI 508 +TEK+ Sbjct: 513 NVTEKL 518 >gi|229181591|ref|ZP_04308916.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] gi|228601787|gb|EEK59283.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] Length = 381 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALGCAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|256825977|ref|YP_003149937.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] gi|256689370|gb|ACV07172.1| acyl-CoA dehydrogenase [Kytococcus sedentarius DSM 20547] Length = 391 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 33/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISD-------GIYCLSGHK-WFLSSPMSDAFIMLAQV---E 250 L+E G+D+A++ ++ D Y +SG K W + +D + A+ + Sbjct: 127 LSEPAAGSDVASMRTKAVGSGDVDETGRSEEYAISGGKMWISHAGHADFYTTFARTGEND 186 Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G+ + CF VP G GL + + K+G S+ E+ + + N+ P Sbjct: 187 GKGISCFHVP-----GDAPGLTFAEPERKMGLHSDTVREVLYDKV---TVPGENLIGTPG 238 Query: 310 EDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + + I L LDS + ++ LA+A + YA R G + + ++ +AD+ Sbjct: 239 KGLGIALAALDSGRLGIAAASTGLAQAATDLALKYAAERQQFGKPIAENQGLQFMLADMQ 298 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +AA A A D K S EAA A++ A T A V +A++ +GG G Sbjct: 299 AQTSAARATYLHAARLKDAGKKFSREAAIAKLFASDT-------AMKVTTDAIQVLGGYG 351 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y + R++R++ I G+ Sbjct: 352 YTTDFPAERYFRDAKITQIFEGT 374 >gi|309791007|ref|ZP_07685547.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] gi|308226980|gb|EFO80668.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] Length = 379 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 24/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA + + D Y ++G K W + +D I++A Sbjct: 113 PLASGKMLGAFSLSEPGAGSDAAAQKTTAVRDGDH-YVINGVKNWVTNGDHADTIILMAM 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVS 305 + G + L D G +++NK+G RS + ++ EF LLG+ Sbjct: 172 TDPSKGVKGISAFLVDTKEPGCRVVKVENKLGIRSAHSSQMAYDEFRVPAWRLLGEEG-- 229 Query: 306 TGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAI 359 + KI + L++ + ++ + +A EA+ Y + R G + + + A+ Sbjct: 230 ----QGFKIAMTILNAGRIGIAAQALGIAQGAYEEALAYTKVREQFGKPIHEFQAVGFAL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A I AA L++ A D+ ++AA A++ A T W +A++ Sbjct: 286 ADMATRIKAARLLTYDAAWRKDQGLDYGKDAAMAKVFASETAMWTA-------TKALQLH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 G +GY +E I R +R++ I G+ Sbjct: 339 GSNGYSKEYPIERFFRDAKITEIYEGT 365 >gi|111023745|ref|YP_706717.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110823275|gb|ABG98559.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 380 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 34/278 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ + D + L+G K F+++ + +D I++A + G Sbjct: 124 IAMTEPGTGSDLQGIKTRAVRDGDD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGF 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306 L+ + G R +KIG ++ T EL F++ GFL N+ Sbjct: 183 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNL-- 240 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 P E + I A+++ + M +L I Y R R G + + +A++A + Sbjct: 241 -PQERLSI------AVVAAAAMESALDMTIQYCRDRKAFGKSIGSFQNTRFVLAELATEA 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A L + ++ K +EAA A K+W + +I ++ GG GY++ Sbjct: 294 TAVRVLVDKFIELLNDEKLSVQEAAMA-------KWWTTEAQVRLIDRCLQLHGGYGYMK 346 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E IA+ Y +S +I G+ M ++ +G NL Sbjct: 347 EYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 380 >gi|110679512|ref|YP_682519.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] gi|109455628|gb|ABG31833.1| acyl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] Length = 382 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%) Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 MA G +S M+ + + W PK+ + E L Sbjct: 78 MACPSVGSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCTME-------------TVFSYCL 124 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261 TE G+D AA+ ++ Q+ + G Y L+G K F+S SD ++ + + G G + + Sbjct: 125 TEPGSGSDAAALRTRAQRSNSG-YVLNGTKAFISGGGYSDVYLTMVRT-GDAGPKGISAV 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTG 307 L + GL + L+NK+G R+ T +++F + F + + L+ Sbjct: 183 LIENGREGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGQEGQGFAYAMAGLDGGR- 241 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A ++ G + +L A+ Y R G L ++ +AD+ + + Sbjct: 242 ----------LNIAASALGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQ 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + A+ D +AA A + K + +A V +A++ GG GY+ + Sbjct: 292 TARIFLRQAASKLD------AKAADATKYCAMAKLYVTDVAFDVANQALQLHGGYGYLAD 345 Query: 428 RSIARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 346 YGIEKIVRDLRVHQILEGTNEVM 368 >gi|264676627|ref|YP_003276533.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262207139|gb|ACY31237.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 376 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE G+D +A+ + + G Y ++G K F++S + D I++A Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP G+P G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKTAGKKGMSAFIVP----TGNP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ Y++ R G + + + Sbjct: 225 AEGEGYRIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ A I AA L + A+ D +EAA A++ A +MA V + A+ Sbjct: 281 FRLAECATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG G + + + R YR+ I G+ + Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|322701299|gb|EFY93049.1| isovaleryl-CoA dehydrogenase precursor [Metarhizium acridum CQMa 102] Length = 401 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 34/270 (12%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +K+ DG + L+G K W + Sbjct: 146 NGSPEQKKKYLPGLIAGTKIGALAMSESGSGSDVVSMRTSAKKV-DGGHLLNGSKMWITN 204 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + L + +G R +K+G R + T EL F N F Sbjct: 205 GPDADLIVVYAKTEPDKGSKGITAFLVETKTDGFSCARKLDKMGMRGSNTGELMFDNVFV 264 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350 ++G +N G V + + L+ ++S M+ +L A+ ++ +R G + Sbjct: 265 PEENVVGSVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVALPFSHQRKQFGSPIA 321 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAP 409 +++ +AD+ + AA A ++ A DE R+++ A A + A C Sbjct: 322 HNQLVQGKLADMYTKLQAARAYTYATAKQVDEQGVIRTQDCAGAILYAAERATEC----- 376 Query: 410 AVIAEAMECI---GGSGYIEERSIARHYRE 436 A++CI GG GY+EE +R RE Sbjct: 377 -----ALDCIQLLGGMGYVEEMPASRLLRE 401 >gi|307293156|ref|ZP_07573002.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306881222|gb|EFN12438.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 380 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 38/387 (9%) Query: 71 QELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRK 130 QE+AR + A P WD+ P +R + G SI+ V + Sbjct: 14 QEMARRFTAD-----AITPFAAEWDEKHIFP--RETIRAAAELGFG-SIY-------VSE 58 Query: 131 QAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAP 190 +A I RL +EA PS ++ + M + + + + K +Y P+ P Sbjct: 59 EAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMASWMIDR-FGGKAVKDKYLPS-MVP 116 Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 M++ LTE G+D AA+ ++ K D Y ++G K F+S + ++ Sbjct: 117 MERIGSYC---LTEAGSGSDAAALKTRAVKDGDH-YVVTGSKQFISGGGENEIYVVMVRT 172 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G G + L+ + G+ + + K+G S T ++ F G + N+ G E Sbjct: 173 GDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFD---GVRVPVENLVGGEGE 229 Query: 311 DMKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +I ++ LD + S+ G + + EA+ Y + R G + D + +AD+ Sbjct: 230 GFRIAMMGLDGGRLNIGACSLGGAQRCIDEALTYTKDRKQFGQSIADFQNTQFMLADMET 289 Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ AA L + A E A ++ AA A+ +A T +V+ A++ GG G Sbjct: 290 ELQAARTLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVDRALQLHGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ + + R +R+ +SIL G+ M Sbjct: 343 YLMDYPVERFWRDLRVHSILEGTNQVM 369 >gi|307728271|ref|YP_003905495.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307582806|gb|ADN56204.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 376 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE + G+D +A+ + + D Y L+G K F++S ++ I++A Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTAIREGD-TYVLNGVKQFITSGKNANVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DSQGYVVARLEDKLGQHSSDTAQIVFEDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGAPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A + AA L + A D + EAA A++ A + A + + A+ Sbjct: 281 FRLAEMATQLEAARQLIWHAAALKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|183982003|ref|YP_001850294.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M] gi|183175329|gb|ACC40439.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium marinum M] Length = 386 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 48/317 (15%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G + + + ++AL T + + W PK + E+ T++A +TE G Sbjct: 93 GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGEF---------ITAIA----MTEPGTG 138 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +D+ I ++ K D Y L+G K F+++ + +D I++AQ + G L+ + Sbjct: 139 SDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEKGAQGFSLLVVERGM 197 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313 G R +KIG + T EL FS+ F +L+ +L P E + Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLMQNL-----PQERIS 252 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I AIM+ +GM L + + Y + R G + + + +A++A + + Sbjct: 253 I------AIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELATEATMVRIMV 306 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + K +E+AA A K++ + ++ ++ GG GY+ E +AR Sbjct: 307 DEFIELHLDGKLTAEQAAMA-------KWYSTEKQVSLNDRCLQLHGGYGYMREYPVARA 359 Query: 434 YRESPANSILLGSGNAM 450 Y +S +I G+ M Sbjct: 360 YLDSRVQTIYGGTTEIM 376 >gi|170759663|ref|YP_001788519.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch Maree] gi|169406652|gb|ACA55063.1| butyryl-CoA dehydrogenase [Clostridium botulinum A3 str. Loch Maree] Length = 379 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 26/270 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSIAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + +LE G P G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKGMP-GFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L D + ++ + +AE AI Y + R G L ++ IAD+ + + A Sbjct: 238 TL---DGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A ++ + +AA A++ A T + V ++++ +GG GY ++ Sbjct: 295 AKYLVYKSAWKKSAGENYTVDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R R++ I G+ + + N L Sbjct: 348 PLERMLRDARITEIYEGTSEVQKMVIANNL 377 >gi|121607236|ref|YP_995043.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121551876|gb|ABM56025.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 386 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 46/317 (14%) Query: 154 PSVTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 PSV + +AL+ + D+A + +E+ P + +V + LTE G+D A Sbjct: 86 PSVDLGTRLALLAWGSMILSDFASEEIKQEFLPR----VASGAVKLSFSLTEPGSGSDAA 141 Query: 213 AITSQGQKISDGIYCLSGHKWFLSS--PMSDAFIMLAQVE------GRVGCFLVPRLLED 264 ++ ++ + DG + L+G K F S +++ I+ A+ + + FLVP + Sbjct: 142 SLQTRARADGDG-WVLNGQKLFSSGADALNNHIIVAARTDPDAPRHKGISLFLVP----N 196 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS----TGPVEDMKILI- 316 SP GL +RL + +G + E+ F +L+G++N T +E +I + Sbjct: 197 TSP-GLTIRRL-DTVGRKIVGLCEIFFDAVRIPRRYLIGEVNHGWHYITRHLERERITLA 254 Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 YL SA R +LA+AI YA R G + D V+ +AD+A ++ AA + Sbjct: 255 ANYLGSA-------RSALADAIAYACERRQFGRPIGDFQVIAHMLADMATEVEAARWMVA 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A +D +++A+ A K + +M + M+ + G GY + + R++ Sbjct: 308 MAAWRYDMQLPCAKQASMA-------KLFVSEMLVRATTQGMQILAGHGYTTDHDMQRYW 360 Query: 435 RESPANSILLGSGNAMV 451 R+ A + +G G + + Sbjct: 361 RD--ARNCTVGGGTSQI 375 >gi|62550674|gb|AAX88796.1| short-chain acyl-CoA dehydrogenase [Equus caballus] Length = 211 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%) Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FLVP GL + ++K+G R+++T L F + + N+ P Sbjct: 13 ISAFLVPM-----PTPGLTLGKKEDKLGIRASSTANLIFEDC---RIPKDNLLGEPGMGF 64 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+A ++YA R G L ++ +AD+AL + Sbjct: 65 KIAMQTLDMGRIGIAAQALGIAQAALDCAVNYAENRRAFGAPLTKLQGIQFKLADMALAL 124 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K ++EAA A++ A + A A+ +A++ +GG GY+ Sbjct: 125 ESARLLTWRAAMLKDNKKPFTKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 177 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 178 EMPAERHYRDARITEIYEGT 197 >gi|93006061|ref|YP_580498.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92393739|gb|ABE75014.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 384 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y ++G K +++ +P + F ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTAIKDGD-TYIINGTKRYITNAPEAGVFTVMARTDPQNKRSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 F+V E +P G+ ++ K+G + T ++ F N L+G + G Sbjct: 183 AFIV----ESDTP-GITLGKIDKKMGQKGAHTCDVIFDNCIVPADALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A S L +A+HYA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQFGQPIANFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ + DE K E++ A++ A +M V A++ GG+GYI + Sbjct: 297 KSMVLDASRLRDEGKDVVTESSCAKMFA-------TEMCGRVADRAVQIHGGAGYIADYG 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|146275645|ref|YP_001165805.1| acyl-CoA dehydrogenase domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|145322336|gb|ABP64279.1| acyl-CoA dehydrogenase domain protein [Novosphingobium aromaticivorans DSM 12444] Length = 394 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 15/238 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + +K+ DG Y LSG K W ++P++D F++ A+ + G + Sbjct: 137 FGLTEPDAGSDPGGMRTTARKV-DGGYVLSGSKTWISNAPIADVFVIWAKSDAHDGG-IR 194 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G GL +++NK+ R++ T + + F LL ++ GP + Sbjct: 195 GFVLEKGM-KGLSAPKIENKVSLRASITGMVVMDDVFVPDDALLPNVQGLKGPFGCLNRA 253 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y S S+ A A Y RH G L + ++ +AD+ DI S R Sbjct: 254 RYGIS-WGSLGAAEFCFAAARQYGLDRHQFGRPLAATQLFQKKLADMMTDITLGLHASLR 312 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + D E A+A M I K A + A + GG+G E + RH Sbjct: 313 VGRLMD-------EGAFAPEMISIVKRNNVGKALDIARIARDMHGGNGISGEYQVIRH 363 >gi|119479533|ref|XP_001259795.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri NRRL 181] gi|119407949|gb|EAW17898.1| isovaleryl-CoA dehydrogenase IvdA, putative [Neosartorya fischeri NRRL 181] Length = 427 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 18/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E G + Sbjct: 162 LAMSEHSAGSDVVSMKTTAKAV-DGGWVLNGTKMWITNGPDADYIVVYAKTEPEKGSKGI 220 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F LLG+LN + +++L Sbjct: 221 SAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENLLGELN------KGVRVL 274 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ ++A+ Sbjct: 275 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 334 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ A D + + E + + A Y + A +A++ +GG+GYI E Sbjct: 335 RSYTYATARHIDNSAATGEVSIRTQDCAGAILY-SAERATECALDAIQLMGGNGYINEIP 393 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 394 AGRLLRDAKLYEIGAGT 410 >gi|327441463|dbj|BAK17828.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 378 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 27/280 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236 F E P + +IG LTE G+D ++ ++ + DG Y L G K F++ Sbjct: 100 FGNEEQRKKYVPKLASGESIGAFCLTEPSAGSDAGSLKTRA--VRDGEHYVLDGAKVFIT 157 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 + +D +I+ A + G + + + + GL + + K+G + TV+L F N Sbjct: 158 NGGEADVYIVFASTDPEAGSRGISAFIVEKNTPGLIIGKDERKMGLHGSRTVQLTFENMR 217 Query: 295 --FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 LLG + + KI L LD + ++ + +AEA A + I Sbjct: 218 VPAENLLGQVG------DGFKIALANLDVGRIGIAAQSLGIAEAALEAATAYAKERIQFG 271 Query: 352 QPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 +P+ ++ +AD+A + A+ L +R AN E S +EA+ A++ A T Sbjct: 272 KPIAQQQGVGFKLADMATAVEASKLLVYRAANMRSEGLSCGKEASMAKLFASQT-----A 326 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M A+ EA++ +GG GY E+ + R++R++ I G+ Sbjct: 327 MDTAI--EAVQILGGYGYTEDYPVERYFRDAKVTQIYEGT 364 >gi|264676620|ref|YP_003276526.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262207132|gb|ACY31230.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 395 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G+K W + P +D ++ A+ E +G V Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGNKMWITNGPDADTLVVYAKTEPEMGARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG LN+ K+L Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENILGGLNMGA------KVL 243 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 244 MSGLDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D + + R WC + A + E ++ GG+GYI E Sbjct: 304 RSFAYTVAKNLDLLGT--DHVRQIRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 361 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 362 LGRLWRDAKLYEIGAGT 378 >gi|296137162|ref|YP_003644404.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295797284|gb|ADG32074.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 392 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 27/279 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + DG + L+G K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMKLRADRRGDG-FVLNGSKMWITNGPDADVLVVYAKTDPAASSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G L G + V ++ Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPAENVLGHLNGGVKVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A V M+ + + Y R G + + +++ +AD+ + AA + Sbjct: 247 ERAVL----AAGPVGIMQAVMDSVVPYVHERKQFGQSIGEFQLIQGKLADMYTVLQAARS 302 Query: 372 LSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L + + + D + +RS A ++ WC + A + E ++ GG+GYI + Sbjct: 303 LLYTVGKNLDALGDGHARSVRKDCAAVI-----LWCAEKATWMAGEGIQIFGGNGYINDY 357 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R +R++ I G+G + + +L G LF Q Sbjct: 358 PLGRLWRDAKLYEI--GAGTSEIRRML----IGRELFAQ 390 >gi|295402212|ref|ZP_06812169.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112297|ref|YP_003990613.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|294975707|gb|EFG51328.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217398|gb|ADP76002.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 402 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 28/269 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K LTE G+D+A+I++ + D Y L+G K W ++D FI+ A Sbjct: 115 PQAKGEKIGAFALTEPNAGSDVASISTTAVRDGDD-YILNGQKTWISLCDIADHFIVFAY 173 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + + F+V R + G + +K K+G R+ T EL F N + N Sbjct: 174 TDKSKKHRGISAFIVERTMP-----GFSSKAIKGKLGIRAGNTGELFFDNV---RVPKEN 225 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 + E KI + LD+ +V+ V L A I Y R G + ++++ Sbjct: 226 LLGEEGEGFKIAMSALDNGRFTVAAGAVGLIMACLEASIKYCHERKTFGKEIGRHQLVQQ 285 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA + + + L +++ ++ + + EA+ A+ +A C A +A++ Sbjct: 286 MIAKMEAGLQISRLLVYKVGFLKNQGRRTTREASLAKWIA-------CDFANQAADDAVQ 338 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 G GY E + R+ R S A I G+ Sbjct: 339 IHGAYGYSNEYPVERYLRNSKAPVIYEGT 367 >gi|84498080|ref|ZP_00996877.1| FadE19 [Janibacter sp. HTCC2649] gi|84381580|gb|EAP97463.1| FadE19 [Janibacter sp. HTCC2649] Length = 395 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL- 257 G GLTE G+D A ++ + G + + G K F+++ +D + V R G Sbjct: 126 GFGLTEPDAGSDAGATRTKAAR-DGGEWVVDGAKAFITNSGTD-ITSVVTVTARTGTDTD 183 Query: 258 ----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 + ++ G + +K+G + T L F G + + N+ + K Sbjct: 184 GNAQISAIMIPSGTTGFTVEPAYDKLGWHISDTHGLTFQ---GVRVPEANLLGEEGQGFK 240 Query: 314 -ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L LD +++S + V +A+A+ YA+ R G + + IAD+A+ + Sbjct: 241 QFLKTLDDGRIAISALAVGMAQAMLDLSTDYAKTRTAFGRPIGANQGVSFQIADLAVSVE 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L+++ A DE ++ + A I K + + A A++ GG+G++EE Sbjct: 301 AARLLTYKAAWLKDELEAGRRSVKEVKQAASIAKLYSSEAAVTATRIAVQIFGGNGFMEE 360 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455 +AR YR+ + +G G + V +L Sbjct: 361 YPVARFYRD--GKILEIGEGTSEVQRML 386 >gi|254695350|ref|ZP_05157178.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|261215723|ref|ZP_05930004.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|260917330|gb|EEX84191.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] Length = 384 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 28/248 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG- 254 LTE G+D A++ + + DG Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTA--VRDGNFYILNGTKRFITNAPIADIFTVMARTAADVKGADGI 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 182 SAFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKT 235 Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 MK+L L A +S LA+ + +A R G + D +++ +AD I A Sbjct: 236 AMKVLDKGRLHIAALSTGAAERMLADTLAHALDRKQFGKPIADFQLIQAMLADSKAQIYA 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + A D ++ S EA+ A K + +M V ++ GG+GY+ E Sbjct: 296 AKCMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEY 348 Query: 429 SIARHYRE 436 +I R YR+ Sbjct: 349 AIERFYRD 356 >gi|303319953|ref|XP_003069976.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109662|gb|EER27831.1| isovaleryl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 430 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + S G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N +K+L+ L+ ++S M+ +L + Y R Sbjct: 261 PKENILGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +A + A ++ A D + + E + + Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|160898376|ref|YP_001563958.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160363960|gb|ABX35573.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 381 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 24/291 (8%) Query: 170 VHKDW-APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-- 223 +H D AP + F + P T IG + LTE G+D+ A+ ++ ++ S+ Sbjct: 89 IHSDMVAPYLWNFGTQVQKDRWLPRMATGELIGAIALTEPGAGSDLKAVRTRARRKSESE 148 Query: 224 -GIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 G Y L+G K F+++ ++ ++LA E +G + + + GL KIG Sbjct: 149 GGGYVLNGQKTFITNGVNAGLMVVLASTEPDLGARGLSLFVVEEGMKGLGKGPALRKIGQ 208 Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVED---MKILIYLDSAIMSVSGMRVSLAEA 335 S T EL F LLG N + V + L A S GM L EA Sbjct: 209 HSQDTCELFFDELHLPADHLLGRENAAFEHVTQELAQERLAIALRAAASTEGM---LDEA 265 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + R R V G ++D + AD +A T L L D+ +R E + + Sbjct: 266 AEFVRNRKVFGRRVLDYQNTRFKFADA---LAKTTMLRVFL----DDCLARHMEGSLDSV 318 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + K ++ V+ E ++ GG GY+ E I R + ++ A I GS Sbjct: 319 TAAMAKLNATELQGQVLDELLQLHGGYGYMAEYGIGRAWADARALRIFGGS 369 >gi|259416027|ref|ZP_05739947.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] gi|259347466|gb|EEW59243.1| acyl-CoA dehydrogenase family protein [Silicibacter sp. TrichCH4B] Length = 385 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 42/278 (15%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P ++ AI LTE + G+D+A T + D Y L+G K W + ++D + + A Sbjct: 113 PKTRSGAAIAAFALTEPQSGSDVANSTMTAVRDGDD-YVLNGEKTWISNGGIADVYTLFA 171 Query: 248 QV------EGRVGCFLVPRL--------LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 + +G + P L LE +P+ L R + V + S Sbjct: 172 RTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLATLRFTD---------VRIPASA 222 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILID 351 G ++ M +L S + + + G R +L EA+ RHV G L D Sbjct: 223 MIGAPGQGFRIA------MSVLDVFRSTVAAAALGFGRRALDEALRRVTDRHVQGAPLFD 276 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPA 410 +++ IAD+ALD+ AA L +R A + D +R + EAA A K + + A Sbjct: 277 LQMVQGHIADMALDVDAAALLVYRAAWTKDSGAARVTREAAMA-------KLFSTEAAQV 329 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 VI +A++ GG G + + YRE A I G+ + Sbjct: 330 VIDKAVQLFGGEGVRSGAMVEKLYREIRALRIYEGASD 367 >gi|289425895|ref|ZP_06427647.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187] gi|289427857|ref|ZP_06429561.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165] gi|295131736|ref|YP_003582399.1| acyl-CoA dehydrogenase, C-terminal domain protein [Propionibacterium acnes SK137] gi|289153671|gb|EFD02380.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes SK187] gi|289158740|gb|EFD06940.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J165] gi|291376151|gb|ADE00006.1| acyl-CoA dehydrogenase, C-terminal domain protein [Propionibacterium acnes SK137] gi|313771550|gb|EFS37516.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL074PA1] gi|313808615|gb|EFS47075.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA2] gi|313811949|gb|EFS49663.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA1] gi|313819041|gb|EFS56755.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA2] gi|313821682|gb|EFS59396.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA1] gi|313823818|gb|EFS61532.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA2] gi|313826921|gb|EFS64635.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA1] gi|313832381|gb|EFS70095.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL007PA1] gi|313834186|gb|EFS71900.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL056PA1] gi|314926157|gb|EFS89988.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL036PA3] gi|314960996|gb|EFT05097.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA2] gi|314975048|gb|EFT19143.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA1] gi|314977459|gb|EFT21554.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL045PA1] gi|314979047|gb|EFT23141.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA2] gi|314985836|gb|EFT29928.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA1] gi|314985975|gb|EFT30067.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA2] gi|314989281|gb|EFT33372.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA3] gi|315081392|gb|EFT53368.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL078PA1] gi|315084968|gb|EFT56944.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA2] gi|315087499|gb|EFT59475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA3] gi|315089593|gb|EFT61569.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL072PA1] gi|315096911|gb|EFT68887.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL038PA1] gi|327332978|gb|EGE74710.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA2] gi|327333970|gb|EGE75685.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL096PA3] gi|327449121|gb|EGE95775.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL043PA2] gi|328757723|gb|EGF71339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL020PA1] gi|332676601|gb|AEE73417.1| acyl-CoA dehydrogenase [Propionibacterium acnes 266] Length = 382 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|212551027|ref|YP_002309344.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549265|dbj|BAG83933.1| acyl-CoA dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 569 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 67/306 (21%), Positives = 131/306 (42%), Gaps = 42/306 (13%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLS 229 HK + P++ + E + + LTE G+D+ A+ + + L+ Sbjct: 158 HKQFIPRVCAGE--------------TLSMDLTEPDAGSDLQAVALKATYDEKKDCWRLN 203 Query: 230 GHKWFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K F+++ +D ++LA+ E G + + D G+ +R++NK+G + + T E Sbjct: 204 GVKRFITNGDADIHLVLARSEEGTKDGRGLSMFIYDKKDGGVDVRRIENKMGIKGSPTCE 263 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRH 343 L + N L G G ++ ++ ++ A + + L+EA I YAR R Sbjct: 264 LTYKNAKAQLCGKRKY--GLIK--YVMSLMNGARLGIMAQATGLSEAAYREAIVYARERK 319 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK--------------SRSEE 389 G +I+ P + I++I + A+ ++ + A D K + E Sbjct: 320 QFGKTIIEFPAVYEMISNIKAKLYASRSILYETARFVDIYKILEEIAKERPLNDAEKLEL 379 Query: 390 AAYARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 Y R+ P+ K + A + ++ GGSG++++ + R YR++ SI G+ Sbjct: 380 KKYKRLSDAFTPLGKAMNTEYANQNTYDCIQIHGGSGFMKDYTCERLYRDARITSIYEGT 439 Query: 447 GNAMVL 452 V+ Sbjct: 440 TQLQVV 445 >gi|89901589|ref|YP_524060.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89346326|gb|ABD70529.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 383 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 48/281 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---G 254 +G++E GG+D+AA+ + +K D Y ++G K W + +D +LA EG V Sbjct: 123 IGVSEVGGGSDVAALKTTAKKDGDD-YLINGSKMWITNGMQADWCCLLANTSEGSVHKNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302 ++ RL SP G+ Q++ +KIG S+ T +L F N GF+ Sbjct: 182 SLIMVRL---DSP-GVTRQKI-HKIGMDSSDTAQLFFDNVRVPQRNLIGQEGMGFMF--- 233 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSL----AEAIHYARRRHVSGGILIDQPVMKRA 358 ++L + + + +G SL + I Y R+R G ++ V+ Sbjct: 234 ----------QMLQFQEERLYGAAGCLRSLDRLIDQTIDYTRQRQTFGKPILHNQVVHFR 283 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++ ++ A AL++R S+ K + A+ A++ A +++ V ++ Sbjct: 284 LAELRTEVEALRALTYRAVESYISGKDVTRLASMAKLKAG-------RLSREVADSCLQY 336 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 GG GY + I++ YR+S SI G + ++L ++ LE Sbjct: 337 WGGMGYTRDNPISQAYRDSRLISI-GGGADEIMLGIICKLE 376 >gi|53725603|ref|YP_103644.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344] gi|67643911|ref|ZP_00442654.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4] gi|121600521|ref|YP_992186.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124385346|ref|YP_001028631.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229] gi|126449936|ref|YP_001081467.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10247] gi|126453011|ref|YP_001067460.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|134280085|ref|ZP_01766796.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|166998257|ref|ZP_02264117.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20] gi|167817165|ref|ZP_02448845.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 91] gi|167825577|ref|ZP_02457048.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 9] gi|167895645|ref|ZP_02483047.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 7894] gi|167904038|ref|ZP_02491243.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177] gi|167912294|ref|ZP_02499385.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 112] gi|167920253|ref|ZP_02507344.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei BCC215] gi|217420906|ref|ZP_03452411.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|226194177|ref|ZP_03789776.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237813587|ref|YP_002898038.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei MSHR346] gi|242317700|ref|ZP_04816716.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|254175546|ref|ZP_04882206.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399] gi|254180842|ref|ZP_04887440.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|254191681|ref|ZP_04898184.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254202338|ref|ZP_04908701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH] gi|254207672|ref|ZP_04914022.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU] gi|254356425|ref|ZP_04972701.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei 2002721280] gi|52429026|gb|AAU49619.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 23344] gi|121229331|gb|ABM51849.1| glutaryl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124293366|gb|ABN02635.1| glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10229] gi|126226653|gb|ABN90193.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|126242806|gb|ABO05899.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei NCTC 10247] gi|134248092|gb|EBA48175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|147746585|gb|EDK53662.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei FMH] gi|147751566|gb|EDK58633.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei JHU] gi|148025422|gb|EDK83576.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei 2002721280] gi|157939352|gb|EDO95022.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|160696590|gb|EDP86560.1| glutaryl-CoA dehydrogenase [Burkholderia mallei ATCC 10399] gi|184211381|gb|EDU08424.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|217396318|gb|EEC36335.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|225933642|gb|EEH29630.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237504311|gb|ACQ96629.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia pseudomallei MSHR346] gi|238525376|gb|EEP88804.1| glutaryl-CoA dehydrogenase, (GCD) [Burkholderia mallei GB8 horse 4] gi|242140939|gb|EES27341.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|243065337|gb|EES47523.1| putative glutaryl-CoA dehydrogenase [Burkholderia mallei PRL-20] Length = 395 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348 +L + GP L+SA ++ + AE+ H AR+ R G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|126440657|ref|YP_001060196.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126220150|gb|ABN83656.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 668] Length = 395 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348 +L + GP L+SA ++ + AE+ H AR+ R G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|322419624|ref|YP_004198847.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] gi|320126011|gb|ADW13571.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter sp. M18] Length = 592 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 85/356 (23%), Positives = 147/356 (41%), Gaps = 40/356 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + +DG Y L+G K F ++ +++ + + A+V+ FLV Sbjct: 147 LTEPDSGSDALGAKASAILSADGSHYVLNGTKQFTTNGSIANLYTVFAKVDREHFTAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R +E G+ + K+G + ++T ++ N +LG++ ++ + Sbjct: 207 ERTME-----GVSVGPEEQKLGIKGSSTTQVILDNVRVPVANVLGEIGKGHKIAFNVLNI 261 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + +LA+ + YA R G + +K +AD+A I A+ +L +R Sbjct: 262 GRFKLGAAVTGSAKFALADGVKYAVLRKQFGRPICSFGAIKEKLADMAAGIFASESLVYR 321 Query: 376 LA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 LA N +D + EE A + I K +C +M V E ++ G Sbjct: 322 LAGLIDDRLATIPKETPNYYDAYQKGIEEYA---MECAIAKVFCSEMLADVADEVVQIHG 378 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLE-QDLGSS 479 G G+I+E R+YR+ N I G+ ++ LL G L L + Q Sbjct: 379 GYGFIQEYPAERYYRDERINRIFEGTN-----EINRLLIPGILLTRSLKGEIPLQREAMK 433 Query: 480 GKKVITI-----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 +T L DS+ E L+ + +A SAA Y+A + D +V L Sbjct: 434 ALDALTTPSFGELDDSVPFAAEKALLSGLKQLFLVVAGSAAQKYQAQIKDEQEVLL 489 >gi|254509736|ref|ZP_05121803.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221533447|gb|EEE36435.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 409 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D AA+ ++ +KI DG Y L+G K W ++P++D F++ A+ +G++ Sbjct: 151 FGLTEADAGSDPAAMKTRAEKI-DGGYRLTGSKMWISNAPIADVFVVWAKSDAHDGKIRG 209 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ D GL +++NK+ R++ T E+ LL + GP Sbjct: 210 FVL-----DKGTKGLSAPKIENKLSLRTSITGEIVLDGVEVDEAALLPHVQGLKGP---- 260 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367 L+ A +S + AE +A R++ ++P + +R +AD+ +I+ Sbjct: 261 --FGCLNRARYGISWGVMGSAECCWHAARQYGLDRKQFNRPLAQTQLFQRKLADMQTEIS 318 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ D+A++ E M I K C A + A + GG+G E Sbjct: 319 LGLQASLRVGRLLDQAEAAPE-------MISIIKRNNCGKALDIARMARDMHGGNGISLE 371 Query: 428 RSIARH 433 + RH Sbjct: 372 FHVVRH 377 >gi|56697074|ref|YP_167437.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56678811|gb|AAV95477.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 380 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 34/264 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ +K ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRAEKSNEG-YVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +EDG+P GL + L++K+G +S T +++F D V G + ++ + Sbjct: 183 --YVEDGTP-GLSFGALEDKMGWKSQPTAQVQFD--------DCKVPAGNLVGVEGDGF- 230 Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 A+M + G R+++A + Y R G + ++ +AD+ +++ Sbjct: 231 KYAMMGLDGGRLNIASCSLGAAQTALNMTLQYMGERKAFGKSIDQFQALQFRLADMEIEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D +++ +A MA K + + V+ + ++ GG GY+ Sbjct: 291 QAARTFLRQAAWKLD---NKTPDATKFCAMA---KKFVTETGSKVVDQCLQLHGGYGYLA 344 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + I + R+ + IL G+ M Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368 >gi|323452208|gb|EGB08083.1| hypothetical protein AURANDRAFT_71689 [Aureococcus anophagefferens] Length = 1636 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 43/302 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR---- 252 LTE G+D+A + ++ DG Y ++G K F+S M+D + +LA++ G Sbjct: 1185 LTEPACGSDLAQVATKAVPNGDGSYKITGTKIFISCGDHDMTDNVLHCVLARLPGAPEGT 1244 Query: 253 --VGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLVP+ L +DG+ N R+++K+G ++T E+ F + G+L+G N Sbjct: 1245 KGISLFLVPKHLVGDDGAVGDFNKTNIGRIEDKMGCHGSSTCEINFDESAGWLIGSENKG 1304 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------RRHV------SGGILI 350 + L +A+ V+ ++ + YA+ R++V + +I Sbjct: 1305 LNHMFTFINTSRLGTAMQGVAAAELAFQNGLPYAKDRLAMRALDRKNVDREPDKAADPII 1364 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---------IMAPITK 401 P ++R + ++ F A DE + +E A+ + PI K Sbjct: 1365 AHPDVRRMLLTQKAVAEGGRSMVFECALIVDEMQLATEAGDTAKYEALDDRLGFLTPILK 1424 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LL 458 + +M ++ GG GYI+ + R++ + G+ LD+L LL Sbjct: 1425 GYLTEMGVEAANLGIQIFGGHGYIKSNKQEQVVRDARIAPVWEGTTQIQALDLLGRKVLL 1484 Query: 459 EK 460 +K Sbjct: 1485 QK 1486 >gi|118464348|ref|YP_882491.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254775754|ref|ZP_05217270.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|118165635|gb|ABK66532.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 609 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP+ L D G NG+ +++K+G +S+ T EL F T G+L+ Sbjct: 224 TKGLSLFYVPKYLFDPETFELGPRNGVFVTGVEHKMGIKSSPTCELTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 GD++ +E ++ I + +A +G +LA +A+ R V G Sbjct: 284 GDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALS-FRLANSFDEAKSRSEEAAYA------RI 395 +I P ++R++ AL + A+ D+ R A + + Sbjct: 339 TAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRVSGADHDMAHRVDDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + A V+ E+++ +GGSG++++ + ++ R+S +S+ G+ LD Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDSLYEGTTAIQALDF- 457 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F + +D G + + V + ++ C E Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATVDDCDE 486 >gi|41407293|ref|NP_960129.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395645|gb|AAS03512.1| FadE15 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 609 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 64/341 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP+ L D G NG+ +++K+G +S+ T EL F T G+L+ Sbjct: 224 TKGLSLFYVPKYLFDPKTFELGPRNGVFVTGVEHKMGIKSSPTCELTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------- 347 GD++ +E ++ I + +A +G +LA +A+ R V G Sbjct: 284 GDVHRGIAQMFTVIEQARMTIGVKAAGTLSTGYLNALA----FAKER-VQGADLTQMADK 338 Query: 348 -----ILIDQPVMKRAIADIALDIAAATALS-FRLANSFDEAKSRSEEAAYA------RI 395 +I P ++R++ AL + A+ D+ R A + + Sbjct: 339 TAPRVTIIHHPDVRRSLMTQKAYAEGLRALYMYAAAHQDDQVAQRVSGADHDMAHRVDDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + A V+ E+++ +GGSG++++ + ++ R+S +S+ G+ LD Sbjct: 399 LLPIVKGVSSERAYEVLTESLQTLGGSGFLQDYPLEQYIRDSKIDSLYEGTTAIQALDF- 457 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 F + +D G + + V + ++ C E Sbjct: 458 ------------FFRKIVRDRGQALQFVTAQITATVDDCDE 486 >gi|330961365|gb|EGH61625.1| glutaryl-CoA dehydrogenase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 393 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A+ ++ + + G Y LSG K W +SP++D F++ A+ + G + F Sbjct: 137 FGLTEPDHGSDPGAMITRARSVEGG-YRLSGSKMWITNSPIADVFVVWAKDDAGDIRGF- 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G GL + K+G R++ T E+ N F + D+ GP Sbjct: 195 ---VLEKGWA-GLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGP------ 244 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AE A Y R G L ++++ +AD+ +I A Sbjct: 245 FTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTEITLA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 305 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLDIARMARDMLGGNGISDEFG 357 Query: 430 IARH 433 IARH Sbjct: 358 IARH 361 >gi|320034301|gb|EFW16246.1| isovaleryl-CoA dehydrogenase [Coccidioides posadasii str. Silveira] Length = 430 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + S G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N +K+L+ L+ ++S M+ +L + Y R Sbjct: 261 PKENILGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +A + A ++ A D + + E + + Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|120612726|ref|YP_972404.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591190|gb|ABM34630.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 601 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 95/407 (23%), Positives = 170/407 (41%), Gaps = 74/407 (18%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ + AL T K + PK+ S E+ T + LTE GT Sbjct: 128 MYPGLSHGAYEALHAHGTEEQKKLYLPKLTSGEWTGT-------------MCLTEPHCGT 174 Query: 210 DIAAITSQGQKIS---DGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC-- 255 D+ + ++ + ++ +G Y ++G+K F+S+ D ++LA++ +G G Sbjct: 175 DLGLLRTRAEPVAGAPEGTYKITGNKIFISAGEHDFTENIVHLVLARLPDAPKGSKGISL 234 Query: 256 FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 F+VP+ + DGS N + L++K+G NAT ++ G L+G P + Sbjct: 235 FVVPKYKVNADGSIGERNPIYCTGLEHKMGIHGNATAQISIDGAIGTLVGQ------PHK 288 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRR----HVSGG---------ILID 351 ++ + + +++A + V + L E A+ YA+ R +SG I++ Sbjct: 289 GLQAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKAKDKEADPIIVH 348 Query: 352 QPVMK-----RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 V K +A A+ A + L A+S + K R + ++ PI K + Sbjct: 349 PDVRKMLLTAKAYAEGARALQIYCTLLLDKAHSHPDEKVRKDSDELVALLTPIVKAFITD 408 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTN 463 M+ GG G+I+E + + R++ N I G+ LD+L L G Sbjct: 409 NGHISTNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKILGNNGAT 468 Query: 464 L--FEQLFSTLEQDLGSSGKKV-----ITILRDSISLCKEDKGLARF 503 L F +L L ++ G + K I L D ++ + G F Sbjct: 469 LKKFGKLVGKLVEEEGVNEKMAEFINPIAYLGDQMTKFTTEIGFKGF 515 >gi|288924664|ref|ZP_06418601.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17] gi|288338451|gb|EFC76800.1| acyl-CoA dehydrogenase family protein [Prevotella buccae D17] Length = 577 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 32/341 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + ++ + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEAENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRDGGVNVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E + YA+ R G +I P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGQKIIHFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D +A+ R+E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDIYKALEDISRDRKLDAEERTEMKKYNRLADAFTPLAKGMNSEYANQNAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469 + GGSG+I E R +R++ SI G+ V+ + + GT + E Sbjct: 409 ISIHGGSGFIMEYKSQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLEASV 468 Query: 470 STLEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 Q L S K++ + ++++ KE ++ L FL ++ Sbjct: 469 CDSLQPLRSRVAKLVALYEEAVNHVKEADNQELHDFLGRRL 509 >gi|222480906|ref|YP_002567143.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453808|gb|ACM58073.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 386 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 42/240 (17%) Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 Y L+G K W + I+ A+ +G + FLVP E G + + K+G Sbjct: 155 YVLNGEKQWITNGQRGGVAIVFAKTDGDDERSITQFLVPADTE-----GFAVGKKEEKLG 209 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVSLA----- 333 R+ S+T G D + P E+ + L +A +++G R+ +A Sbjct: 210 LRA--------SDTTGISFDDCRI---PAENRLTEEGKGLSAAFRTLTGGRIGIASQAVG 258 Query: 334 -------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 EA YA R GG + D ++ A++A DI+AA L EA + Sbjct: 259 LAQAAFDEAKAYAAEREQFGGPIDDIQTIQHTFAEMATDISAARLL-------VREACRQ 311 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +E R+ A KY + A +V EA++ GG GY + + R YR++ I G+ Sbjct: 312 AEAGEDNRVAASKAKYRASETAMSVTNEAVQIHGGYGYTTDFDVERFYRDAKITEIYEGT 371 >gi|91787553|ref|YP_548505.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] gi|91696778|gb|ABE43607.1| acyl-CoA dehydrogenase-like protein [Polaromonas sp. JS666] Length = 398 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 30/259 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D A++ ++ + + DG + L G K W +SP++D F++ A Sbjct: 123 PKLATGEWVGCFGLTEPNHGSDPASMLTRAKPV-DGGFILKGSKMWITNSPIADVFVVWA 181 Query: 248 QVE---GRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 ++E G+VG R LLE G GL +++ K+ R++ T E+ + F LL Sbjct: 182 KLEDPDGKVGGQESIRGFLLEKGM-KGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL 240 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 +++ GP L+ A ++ + AE A Y R G L + Sbjct: 241 PNVSGLKGP------FGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQL 294 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +++ +AD+ +I R+ DE K+ E M + K C + + Sbjct: 295 IQKKLADMQTEITLGLQACLRVGRLMDEDKAMPE-------MISLIKRNSCGKSLDIARM 347 Query: 415 AMECIGGSGYIEERSIARH 433 A + GG+G +E + RH Sbjct: 348 ARDMHGGNGIHDEYHVIRH 366 >gi|115379923|ref|ZP_01466981.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella aurantiaca DW4/3-1] gi|310821597|ref|YP_003953955.1| acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|115363074|gb|EAU62251.1| acyl-CoA dehydrogenase, C-terminal domain protein [Stigmatella aurantiaca DW4/3-1] gi|309394669|gb|ADO72128.1| Acyl-CoA dehydrogenase [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 GLTE G+D AA + + D Y ++G K W + P +DA ++ G Sbjct: 123 FGLTEPEAGSDAAAQQTVAVRRGDE-YVINGSKNWITNGPKADAIVLFTMTNKEAGNKGI 181 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVST 306 F+VP +P G K+G + + + F + +LLG V+ Sbjct: 182 TAFIVP----TNTP-GFIRAEPDKKMGISAAHSCSMFFEDMRVPAKYLLGKEGEGFKVAM 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ +I I A ++ R + EA+ Y+ R G + + ++ +AD+A +I Sbjct: 237 STLDGGRIGI----AAQALGIARAAFEEAVRYSGERKTFGKPIREHQAIQFMLADMATEI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A D+ S E+A A++ + +MA V +A++ GG GY + Sbjct: 293 DAARLLVHQAALLKDKGVRHSMESAMAKL-------YASEMASRVANKALQVHGGMGYSK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E RH R++ I G+ Sbjct: 346 EMDAERHVRDARITEIYEGT 365 >gi|76810110|ref|YP_334609.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|254259102|ref|ZP_04950156.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] gi|189339699|pdb|3D6B|A Chain A, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|189339700|pdb|3D6B|B Chain B, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|189339701|pdb|3D6B|C Chain C, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|189339702|pdb|3D6B|D Chain D, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|76579563|gb|ABA49038.1| glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|254217791|gb|EET07175.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] Length = 395 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348 +L + GP L+SA ++ + AE+ H AR+ R G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|226295306|gb|EEH50726.1| acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18] Length = 439 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 68/299 (22%), Positives = 129/299 (43%), Gaps = 33/299 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K W PK+ T L+E G+D A+ ++ K S G Y ++ Sbjct: 162 IKKKWLPKL--------------ATDTVGSFCLSEPASGSDAFALQTKAVKTSSG-YKIN 206 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-- 286 G K W +S + FI+ A ++ G + + + G + + K+G R+++T Sbjct: 207 GSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIVEKDTPGFSIAKKEKKLGIRASSTCV 266 Query: 287 -----VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 VE+ N G + + + +I I +++ G + A+ I RR Sbjct: 267 LNFDDVEIPKENLIGVEGQGYKYAINLLNEGRIGIAAQMTGLAL-GAWENAAKYIWNDRR 325 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 + G ++ + M+ +A +IAAA AL F A + + ++AA A++ Sbjct: 326 QF--GQLIGEFQGMQHQVAQAYTEIAAARALVFNAARKKEAGQDFVQDAAMAKL------ 377 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + LL+K Sbjct: 378 -YASQVAGRVSGSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKLLQK 435 >gi|150390841|ref|YP_001320890.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950703|gb|ABR49231.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus metalliredigens QYMF] Length = 379 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 32/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD +A T+ + DG Y L+G K F+++ + +I++A Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDASAQTTTA--VLDGDHYILNGSKIFITNAGYAHTYIIMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TF 295 + VG + + D G + K+G R ++T EL F + F Sbjct: 171 MTDKSVGTKGISAFIVDVDTEGFTIGPKEKKLGIRGSSTCELIFDDCRIPKENIIGKEGF 230 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 GF + + G + A ++ + +L E ++Y + R G + Sbjct: 231 GFKIAMKTLDGGRI---------GIAAQALGIAQGALDETVNYVKERRQFGRPISAFQNT 281 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD++ I AA L ++ A + D + EAA A++ A + A V +A Sbjct: 282 QFQLADMSSKIEAARLLVYKAAYNKDMGLPYANEAAMAKLFA-------SEAAMEVTTKA 334 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GYI + + R R++ I G+ Sbjct: 335 VQLHGGYGYIRDYPVERMMRDAKITEIYEGT 365 >gi|114563909|ref|YP_751423.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335202|gb|ABI72584.1| acyl-CoA dehydrogenase domain protein [Shewanella frigidimarina NCIMB 400] Length = 596 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 41/315 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQV----E 250 + LTE GTD+A + ++ D ++ +SG K F+SS ++D I +LA++ E Sbjct: 162 MNLTESHAGTDLALLRTKAVPAGDDVFAISGEKIFISSGDHDLADNIIHLVLARLPDAPE 221 Query: 251 GRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G F VP+ L + G N L L++K+G N+T + F G L+G + Sbjct: 222 GVKGISLFAVPKFLVNADGSLGEANKLSATGLEHKMGIHGNSTCVMHFDGAIGELVGAAH 281 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--IDQP-------- 353 + M L I + ++ A+ YA+ R + G L + QP Sbjct: 282 QGLKAMFTMMNQARLGVGIQGLGVSDIAYQNALVYAKER-IQGRALSGVKQPEQAADSLL 340 Query: 354 ---------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 + +++ + + AL + + + A A + PI K + Sbjct: 341 VHGDVRRMLLSQKSFNEGTRALMGQQALWLDQVERHTDPEKAKQANALAALFTPIVKGFV 400 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKG 461 +A + GG GYI E + + R+ I G+ LD++ L +KG Sbjct: 401 TDQGFKACVDAQQIYGGHGYINEWGMEQFVRDIRIAMIYEGTNGVQALDLVGRKLLADKG 460 Query: 462 TNLFEQLFSTLEQDL 476 L L+S + ++L Sbjct: 461 AAL--TLWSVMVKEL 473 >gi|313829293|gb|EFS67007.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL063PA2] Length = 382 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|254480511|ref|ZP_05093758.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214039094|gb|EEB79754.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 390 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 95/389 (24%), Positives = 150/389 (38%), Gaps = 55/389 (14%) Query: 95 DKVEFHPAWHALLRRSIHDGL--HCSIWD-RSFEPVVRKQAHKIRAARLYLMA------- 144 D E H AW LRR I + H WD + F P + +AA L+ Sbjct: 14 DLTEEHEAWREQLRRFIDREIMPHVDEWDEQGFLP----EELWGKAAEFGLLGLGYPEQY 69 Query: 145 -QLEAG------HLMSPSVTSASMVALMTTPRVHKDWAPKIF---SREYDPTNKAPMQKT 194 +E G +++S ++ S+ L +T H P + S P+ Sbjct: 70 GGIETGIDLYHHNILSEELSRTSLGGLPSTLLSHGIGMPPVVAFGSESLKSEIIPPVLAG 129 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----Q 248 I L +TE GG+D+A + Q + DG Y ++G K F+S M + + Sbjct: 130 EKRICLAITEPSGGSDVANL--QTTAVRDGEHYIVNGSKTFISGGMGSHWATTGVRTGGE 187 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303 V ++P LE G+ L K G + T L F N G LL + Sbjct: 188 GGSGVSVLVIPMDLE-----GVSRTPLNKKQGWWCSDTATLYFDNVRVPAGNLLAEEGNG 242 Query: 304 --VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 V D ++ + A+M + RV L +A+++A+ R G L D V++ IA+ Sbjct: 243 FLVIANNFNDERLAM----AVMMEAFARVCLEDAVNWAQERKTFGKRLADHQVIRHKIAE 298 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + I + + A ++ T +C + EAM+ +GG Sbjct: 299 MKQRINVCQTYIQHCTRQVITGTADFGDIALLKVQCSQTMEFCAR-------EAMQILGG 351 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+ + R YRE N+I GS M Sbjct: 352 IGYMRGNRVERIYREVRVNAIGGGSEEIM 380 >gi|47230106|emb|CAG10520.1| unnamed protein product [Tetraodon nigroviridis] Length = 415 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 L ++E G+D+ ++ + +K D Y L+G+K W + P +D I+ A+ + G + Sbjct: 158 LAMSEPNAGSDVVSMRLKAKKQGDH-YVLNGNKFWITNGPDADVLIVYAKTDPGAHQRGI 216 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E G P Q+L +K+G R + T EL F N +LG LN + Sbjct: 217 TAFVVEKGMPGFSTAQKL-DKLGMRGSNTCELIFENCRIPEENVLGSLNKGVYVMMSGLD 275 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L L A V M+ L A+ Y R G + +M+ +AD+ +++ + Sbjct: 276 LERLVLAAGPVGIMQAVLDCAVPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 335 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + D+ +++ A + +C + A V + ++C+GG+GYI + R Sbjct: 336 NVARAADKGHLSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPAGRFL 388 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 389 RDAKLYEIGAGT 400 >gi|154248585|ref|YP_001419543.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162670|gb|ABS69886.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 375 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D A + ++ ++ D Y LSG K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDAANLKTRARRDGDQ-YILSGAKQFITSGKNGNVVIVFAVTDPDAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R++ K+G S+ T +L F++ L DL + E + Sbjct: 179 ISAFIVPT-----DTPGYEVVRVEEKLGQHSSDTCQLAFNDMR--LPADLRLGA-EGEGL 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA-----IADIALDI 366 KI L L+ + ++ V +A A A + + S + +P+M+ +AD+A I Sbjct: 231 KIALSNLEGGRIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AAA + A + + EA+ A++ A +MA V + A++ GG GY+ Sbjct: 291 AAARHMVLHAAALREAGQPCLTEASMAKLFA-------SEMAEQVCSAAIQIHGGYGYLA 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 344 DFPEERIYRDVRVCQIYEGTSD 365 >gi|120553452|ref|YP_957803.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120323301|gb|ABM17616.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 591 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 51/357 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T ++ AL + + + + K+ S E+ T + LTE GT Sbjct: 126 MYPGLTHGAISALYAHGSEELKQTYLEKLISGEWTGT-------------MCLTEPHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ I ++ DG Y + G K +++ D ++LA++ G + F+V Sbjct: 173 DLGLIRTKATPNDDGSYAIEGTKIWITGGEHDLVDNIVHLVLAKLPGAPDTTKGISLFVV 232 Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----K 313 P+ L D G N L++K+G + +AT + F G+L+G+ N + M + Sbjct: 233 PKFLPDSGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGEPNKGMSAMFTMMNEAR 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-------------VMKRAIA 360 +++ + ++ + SLA A + R +SG D P +M++ + Sbjct: 293 LMVGMQGLGLAEMAYQESLAFARERLQSRSLSGPKNPDGPADPIIVHPDVRRMLMRQKVL 352 Query: 361 DI---ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + AL + L +A+ +E + +++ +++ P+ K + + Sbjct: 353 NEGMRALALFTGHQLDLSVAHPDEEVRENADD--LVQLLTPVVKAFLTDEGYNNANWGQQ 410 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 +GGSG+ ++ + + R+ I G+ +D++ L KG L LF+ L Sbjct: 411 VLGGSGFTQDWPLEQLVRDGRIARIYEGTNGIQAMDLVGRKLSLKGGQLVRALFAEL 467 >gi|262371616|ref|ZP_06064895.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] gi|262311641|gb|EEY92726.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] Length = 387 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 88/383 (22%), Positives = 156/383 (40%), Gaps = 63/383 (16%) Query: 93 RWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 WD+ E P L +++ GL +D ++ + A L+A +E Sbjct: 33 EWDEAETFP--RELYKKAADIGLLGVGFDENYGGIAGTDAFYT------LLASVELAKCA 84 Query: 153 SPSVTSASMVALMTTP--------RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 S + ++ + + TP V + PKI S E K S L +TE Sbjct: 85 SGGLAASLLSHTIGTPPIQHFAQEEVKAEVLPKILSGE----------KISA---LAITE 131 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFLVPRLL 262 GG+D+AA+ ++ + D Y ++G K F++S + +D + + + + G + LL Sbjct: 132 PSGGSDVAALKTKAVRDGDD-YIVNGEKTFITSGIRADYYSVAVRTDPDAKGANGISMLL 190 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLD 319 D G+ +L +K+G ++ T L F N LLG E+M + ++ Sbjct: 191 IDAHSEGITKSKL-DKMGWWASDTAHLHFDNVRVPAKNLLG--------AENMGFFVIMN 241 Query: 320 S--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + A S V EA+ +A++R G LID V++ + D+A + + A Sbjct: 242 NFNMERFFLAASSYGYALVCYEEALDWAQQRQTFGKRLIDHQVVRHKLVDMATRLTSTRA 301 Query: 372 L----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 L ++RL + + + +A T +C A++ +GG G++ Sbjct: 302 LLEDTAYRLGKPELQGNELIAQICMLKNVATQTMQFCADA-------AVQTLGGMGFMRG 354 Query: 428 RSIARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 355 TKSERIYREVKVNMIGGGAEEIM 377 >gi|209870540|pdb|3EOM|A Chain A, 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|209870541|pdb|3EOM|B Chain B, 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|209870542|pdb|3EOM|C Chain C, 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|209870543|pdb|3EOM|D Chain D, 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei gi|209870544|pdb|3EON|A Chain A, 2.55a Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei In Complex With A Small Molecule gi|209870545|pdb|3EON|B Chain B, 2.55a Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei In Complex With A Small Molecule gi|209870546|pdb|3EON|C Chain C, 2.55a Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei In Complex With A Small Molecule gi|209870547|pdb|3EON|D Chain D, 2.55a Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei In Complex With A Small Molecule gi|281307101|pdb|3II9|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei At 1.73 Angstrom gi|281307102|pdb|3II9|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei At 1.73 Angstrom gi|281307103|pdb|3II9|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei At 1.73 Angstrom gi|281307104|pdb|3II9|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei At 1.73 Angstrom Length = 396 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 115 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 232 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGI 348 +L + GP L+SA ++ + AE+ H AR+ R G Sbjct: 233 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 286 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 287 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 339 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 340 LDIARLARDMLGGNGISDEFGVARH 364 >gi|221066511|ref|ZP_03542616.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220711534|gb|EED66902.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 388 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 33/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254 LTE G+D A++ ++ + + + Y ++G K F+S S ++L G G Sbjct: 124 LTEPGAGSDAASLKTRAELVGNE-YIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+VP G+ Y + + K+G S T + F N + N+ E KI Sbjct: 183 AFVVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +L +A HY + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQHYMQERKQFGKAIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + RLA S +A +R S A A+ A + C EA++ GG GYI Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346 Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 E + R R++ + IL G+ M V+ +LE Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380 >gi|148261178|ref|YP_001235305.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|326404583|ref|YP_004284665.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|146402859|gb|ABQ31386.1| isovaleryl-CoA dehydrogenase [Acidiphilium cryptum JF-5] gi|325051445|dbj|BAJ81783.1| isovaleryl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 390 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K + Y L+G K W + P +D ++ A+ + G Sbjct: 131 LAMSEPNAGSDVVSMRLRAEKRGNS-YVLNGSKMWITNGPEADTLVVYAKTDPESG---- 185 Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVST 306 PR L+E P C Q+L +K+G R + T EL F SN G + +NV Sbjct: 186 PRGITAFLVEKTMPGFSCAQKL-DKLGMRGSNTGELVFEDCVVPESNVLGGVGRGVNVLM 244 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + ++ A + M+ +L I Y R G + + +++ +AD+ + + Sbjct: 245 SGLDYERAVL----AAGPLGIMQSALDIVIPYVHEREQFGQKIGEFQLIQGKLADMYVTM 300 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +AA A + +A + D ++ ++AA A + A W + EA++C+GG+GYI Sbjct: 301 SAARAYVYAVAKACDRGRTTRKDAAGAILYAAEKATW-------MALEAIQCLGGNGYIN 353 Query: 427 ERSIARHYRESPANSILLGS 446 + + R R++ I G+ Sbjct: 354 DYATGRLLRDAKLYEIGAGT 373 >gi|315441994|ref|YP_004074873.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315260297|gb|ADT97038.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 611 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 47/289 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + L G K F+++ +D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDTDDLFENIVHVVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F+VP+ D G NG+ L++K+G +++AT EL F G+L+ Sbjct: 224 TKGLSLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351 D + +G + K++ Y + +++ + A+ YA+ R + G +I Sbjct: 284 NDTH--SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTR-IQGADMIQMTDKTA 340 Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI---MA 397 P ++RA+ AL A D + S ++ A R+ + Sbjct: 341 PRVTIMHHPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 PI K + A + E+++ GGSG++++ + ++ R++ +S+ G+ Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGT 449 >gi|315225079|ref|ZP_07866896.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287] gi|314944762|gb|EFS96794.1| acyl-CoA dehydrogenase [Capnocytophaga ochracea F0287] Length = 381 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 49/303 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG G+TE G+D + + K D + L+G K Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTK 154 Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F++ + ++ G G F+V R G + +NK+G R++ T Sbjct: 155 NFITHGKTGQIAVVIARTGEKGNKHAITAFVVER-----GTKGFSSGKKENKLGMRASET 209 Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337 E+ F + + D N V G ++ MKIL D +S+ + + +A+ ++ Sbjct: 210 AEMIFQDC---RIPDANRLGEVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA+ R G LID + +AD+A +I A+ L + A + + + A A++ A Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQKNNGQRVTLSGAMAKMYA 323 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 C ++A EA++ GG GY ++ + + +R+S +I G+ L + Sbjct: 324 SEV---CVRVA----TEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQ 376 Query: 458 LEK 460 ++K Sbjct: 377 IDK 379 >gi|257455070|ref|ZP_05620313.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] gi|257447542|gb|EEV22542.1| acyl-CoA dehydrogenase domain protein [Enhydrobacter aerosaccus SK60] Length = 594 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML-------AQVEG 251 LTE GTD+ I ++ DG Y ++G K F+++ ++D I L A Sbjct: 166 LTEPHAGTDLGIIKTKAVPNQDGSYNITGTKIFITAGEHDLADNIIHLVLAKTPDAPAGS 225 Query: 252 R-VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 R + F+VP+ + G N + +++K+G +++AT + F GF++G N Sbjct: 226 RGISLFIVPKFHVNADGSLGERNAVSCGSIEHKMGIKASATCVMNFDGAKGFMVGAENTG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGI---------LIDQP 353 + M L + + G ++ A Y R GI ++ Sbjct: 286 LASMFIMMNYERLTMGLQGIGGAELAYQNATAYTLDRIQGRADSGIQEPNKAADPIVFHA 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--MAPITKYWCCKM 407 ++R + + A+ + +A D K + + +AA R+ + P+ K + Sbjct: 346 DVRRMLLNAKTISEASRCFAMYVAKELDTNKYTDDAEARKAADDRVALLTPVAKAFLTDR 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +A +C GG GYI E + + R++ + I G+ LD+L Sbjct: 406 GLEASIDAQQCFGGHGYIREWGMEQIVRDTRISQIYEGTNGIQSLDLL 453 >gi|256819569|ref|YP_003140848.1| acyl-CoA dehydrogenase domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581152|gb|ACU92287.1| acyl-CoA dehydrogenase domain protein [Capnocytophaga ochracea DSM 7271] Length = 381 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 49/303 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG G+TE G+D + + K D + L+G K Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WILNGTK 154 Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F++ + ++ G G F+V R G + +NK+G R++ T Sbjct: 155 NFITHGKTGQIAVVIARTGEKGNKHAITAFVVER-----GTKGFSSGKKENKLGMRASET 209 Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337 E+ F + + D N V G ++ MKIL D +S+ + + +A+ ++ Sbjct: 210 AEMIFQDC---RIPDANRLGEVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA+ R G LID + +AD+A +I A+ L + A + + + A A++ A Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQKNNGQRVTLSGAMAKMYA 323 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 C ++A EA++ GG GY ++ + + +R+S +I G+ L + Sbjct: 324 SEV---CVRVA----TEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVISRQ 376 Query: 458 LEK 460 ++K Sbjct: 377 IDK 379 >gi|222479632|ref|YP_002565869.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452534|gb|ACM56799.1| acyl-CoA dehydrogenase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 381 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 17/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVG-C 255 L+E G+D+ A+++ ++ DG G W + ++D + A+ + GR G Sbjct: 123 FALSEAEAGSDVPAMSTAAERDGDGYLVNGGKLWISNGSVADTVTLFAKTDPDAGRKGIS 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-GFLLGDLNVSTGPVEDMKI 314 V R ED +G + ++K+G++ T EL F + + G V+ +K Sbjct: 183 SFVVRPEED---DGFIVEGTEDKLGDKGCPTAELRFDDLWIPEERRLGEEGEGFVQALKT 239 Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + A SV R +L EA YA+ R + D ++ +AD+ AA L Sbjct: 240 LNGGRITIAARSVGIARAALDEAKSYAQEREQFDSPIADFQAIQHKLADMDTKARAAELL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A+ + +EAA A++ + +++ V E ++ GG GY ++ R Sbjct: 300 MHEAADLKIRDEDYIKEAAQAKL-------YASEISREVANEGIQIHGGYGYTKDFPAER 352 Query: 433 HYRESPANSILLGSGNAM 450 YR++ N I G+ + Sbjct: 353 FYRDAKLNEIYEGTSEVL 370 >gi|254494930|ref|ZP_01052594.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152] gi|213690512|gb|EAQ42022.2| acyl-CoA dehydrogenase [Polaribacter sp. MED152] Length = 388 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + S K + Y L+G K F+++ + SD I+ A+ + + Sbjct: 125 LCITEPFGGSDVAGMRSTAVKQGNK-YILNGSKTFITNGVYSDYLIVAAKTDPSDKYKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G+ +L +K+G R++ T E+ F N L+G+ + + L Sbjct: 184 SIFVVDRDSKGISATKL-DKLGWRASDTGEIAFDNVEIPAENLMGEEGLGFPYIMQHFAL 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + + + ++ A+ Y + R G L ++ +A++A + ++ Sbjct: 243 ERLIMGVNAHARAEFAVDYAMQYMQERIAFGKSLDKFQALRHKVAEMASKVDMCREYNYS 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + D+ +EA+ +++++ K+A VI +A++ +GG GY+EE +AR R Sbjct: 303 ITKRLDQGTYVVKEASMSKLLS-------TKIADEVIYDALQLLGGYGYMEEYPMARLLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|50843651|ref|YP_056878.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202] gi|282854496|ref|ZP_06263832.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139] gi|50841253|gb|AAT83920.1| acyl-CoA dehydrogenase [Propionibacterium acnes KPA171202] gi|282582357|gb|EFB87738.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes J139] gi|313765182|gb|EFS36546.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA1] gi|313817094|gb|EFS54808.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA1] gi|314916814|gb|EFS80645.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL005PA4] gi|314918991|gb|EFS82822.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA1] gi|314921178|gb|EFS85009.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA3] gi|314932475|gb|EFS96306.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL067PA1] gi|314956298|gb|EFT00670.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL027PA1] gi|314958689|gb|EFT02791.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL002PA1] gi|314968821|gb|EFT12919.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA1] gi|314980744|gb|EFT24838.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA3] gi|315090937|gb|EFT62913.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA4] gi|315100028|gb|EFT72004.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL059PA2] gi|315102811|gb|EFT74787.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL046PA1] gi|315105278|gb|EFT77254.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL050PA2] gi|315107366|gb|EFT79342.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA1] gi|327455501|gb|EGF02156.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA3] gi|327456157|gb|EGF02812.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL083PA2] gi|328756836|gb|EGF70452.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL087PA1] gi|328759117|gb|EGF72733.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA2] Length = 382 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|121605031|ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594000|gb|ABM37439.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 394 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y LSG+K W + Sbjct: 117 FGTEATKQKYLPRLATGEFIGCFGLTEPDHGSDPGSMITRARKVPGG-YSLSGNKMWITN 175 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG + F +LE G GL + K+G R++ T E+ F Sbjct: 176 SPIADVFVVWAKDDEGAIRGF----VLEKGW-KGLSAPAVHGKVGLRASITGEIVMDAVF 230 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 231 CPEENAFPEVRGLKGP------FTCLNSARYGIAWGALGAAEDCFERARQYVLDRKQFGK 284 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ DI+ RL DE + E + I K C Sbjct: 285 PLAANQLIQKKLADMMTDISLGLQGCLRLGRMKDEGMAAVE-------VTSIMKRNSCGK 337 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 338 ALDIARLARDMLGGNGISDEFGVARH 363 >gi|332557937|ref|ZP_08412259.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N] gi|332275649|gb|EGJ20964.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N] Length = 385 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 39/298 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMRLKA 146 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K +G Y L+G K W + P +D ++ A+ + G + L + S G + Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328 K+G R + T EL F N F +LG + +++L+ LD + +SG M Sbjct: 206 KLGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 L E + Y + R G + + +M+ +AD+ + + A A + A + D + Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +AA + + + A +A++ +GG+GY+ + ++R +R++ I G+ Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGYLNDSVVSRLFRDAKLMEIGAGT 370 >gi|315126577|ref|YP_004068580.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913] gi|315015091|gb|ADT68429.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas sp. SM9913] Length = 391 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDADTLVIYAKTDLNAGAKGI 190 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + + G + +K+G R + T EL F N +LG+LN E +K+L Sbjct: 191 TAFIVEKTFPGFSTAQKLDKLGMRGSNTCELVFDNCEVPEENILGNLN------EGVKVL 244 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + + +A + Y R + +++ IAD+ + AA Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERKQFDSPIGQFQLIQGKIADMYTQMNAA 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + +A + D ++ ++AA A + + ++A + +A++ +GG+GYI E + Sbjct: 305 RSYVYTVAKACDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGYINEYA 357 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 358 TGRLLRDAKLYEIGAGT 374 >gi|296141782|ref|YP_003649025.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296029916|gb|ADG80686.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 386 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 29/284 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK S E + + +TE G+D+ A+ + + D Y ++G K Sbjct: 117 WLPKAASGE-------------AVLAIAMTEPGTGSDLQAVRTTAVREGD-EYVINGSKT 162 Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+S+ + D I++A+ + G + ++ E + G R+ KIG T EL F Sbjct: 163 FISNGSLCDLLIIVAKTDTSQGAKGISLIVAETDNLPGFERGRVLQKIGQHGQDTRELSF 222 Query: 292 SNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 ++ LLG + G + M+ L L AI V ++ EAI Y + R G Sbjct: 223 TDMRVPVANLLGGVE-GQGFYQLMRQLPRERLSIAIGGVDAAEKAVLEAIAYTKERKAFG 281 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + D K +AD ++ A L D R+ + A + K W Sbjct: 282 HPIADFQNTKFVLADAKTEVFAGRTL-------IDHCIGRAIDGTLDAATASMAKLWATD 334 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 M VI ++ GG GY+ E IA+ Y + I G+ M Sbjct: 335 MQCRVIDSVLQLFGGYGYMMEYPIAQLYAGARVQKIYGGTNEIM 378 >gi|327404135|ref|YP_004344973.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823] gi|327319643|gb|AEA44135.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823] Length = 379 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 44/266 (16%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIY-CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL- 257 GLTE G+D A+ + + DG Y ++G K W D ++L R G L Sbjct: 124 GLTEPNTGSD--AMRMKCTAVKDGDYWVVNGAKNWITHGLSGDVAVVLI----RTGELLD 177 Query: 258 ----VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 ++E G+P G ++K+K+G R++ T EL F N ++G+ V G + Sbjct: 178 SNGITAFIVEKGTP-GFSAVKIKDKLGVRASETAELIFDNVRLHESQVIGE--VGQGFKQ 234 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK-RAI----A 360 M IL D +S++ + +A ++ YA+ R G QP+ K +AI A Sbjct: 235 AMHIL---DGGRISIAALSCGIARGAYEASVKYAKEREQFG-----QPIGKFQAIGFKLA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A ++ AA L+F+ A+ + + + + A+A KY+ +++ EA++ +G Sbjct: 287 DMATEVEAAELLTFQAADYKNRNQKMTTQGAFA-------KYFASEVSVRCGNEAVQIMG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY +E + R++ +I G+ Sbjct: 340 GYGYTKEYPAEKFLRDAKLMTIGEGT 365 >gi|260591324|ref|ZP_05856782.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319] gi|260536690|gb|EEX19307.1| acyl-CoA dehydrogenase family protein [Prevotella veroralis F0319] Length = 577 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L E + YA+ R G +I P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ A D K+ R E Y R+ P+ K + A Sbjct: 347 SLLYQTARYVDIYKALEDIARGQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +A+ GGSG+I E R YR++ SI G+ V+ + + GT L Sbjct: 407 DAISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457 >gi|154253221|ref|YP_001414045.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157171|gb|ABS64388.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 390 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K D + L+G K W ++P ++ I+ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMRLKAEKKGD-RFVLNGSKMWITNAPDAETLIVYAKTDASAGPKGI 189 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 P L+E G Q+L +K+G R + T EL F + +LG LN E +++ Sbjct: 190 TPFLIEKGMKGFRPAQKL-DKLGMRGSNTAELVFEDCEVPEENVLGKLN------EGVRV 242 Query: 315 LIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ + A+++ M+ + I Y R G + +M+ +AD+ + A Sbjct: 243 LMSGLDYERAVLAAGPLGIMQACMDAVIPYVHERKQFGEPIGTFQLMQGKLADMYSTMNA 302 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + +A + D ++ ++AA A + A W + EA++ +GG+GYI + Sbjct: 303 CRAYVYAVAKACDRGQTTRKDAAGAILYAAEKATW-------MALEAIQALGGNGYINDY 355 Query: 429 SIARHYRESPANSILLGS 446 S R R++ I G+ Sbjct: 356 STGRLLRDAKLYEIGAGT 373 >gi|254479683|ref|ZP_05092980.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Carboxydibrachium pacificum DSM 12653] gi|214034382|gb|EEB75159.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Carboxydibrachium pacificum DSM 12653] Length = 391 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 20/275 (7%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP- 238 ++E P+ + LTE GTD A I + D Y L+G K F+++ Sbjct: 114 TKEQKEKYLVPLARGEKLGAFALTEPNAGTDAAGIQTTAMLEGDH-YVLNGCKIFITNGG 172 Query: 239 MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 ++D +I+ A+ + G + ++E G P G +++ K+G R + EL F + Sbjct: 173 VADVYIVFAKTDKSQGAKGISAFIVEKGFP-GFSIGKIEEKMGIRGSRAAELVFEDC--- 228 Query: 298 LLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID 351 ++ N+ E KI ++ LD + + + +A+A Y + R G + Sbjct: 229 IVPKENLLGKEGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGK 288 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ IA++A ++AA L + A + S S EAA A++ A T A V Sbjct: 289 FQGLQWYIAEMATKVSAARHLVYYAAWRKENNLSYSMEAAMAKLFASET-------AMEV 341 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY ++ + R R++ I G+ Sbjct: 342 TTKAVQIFGGYGYTKDYPVERLMRDAKITEIYEGT 376 >gi|71065730|ref|YP_264457.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71038715|gb|AAZ19023.1| acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 384 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y ++G K +++ +P + F ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTAIKDGD-TYIINGTKRYITNAPEAGVFTVMARTDPQNKRSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 F+V E +P G+ ++ K+G + T ++ F N L+G + G Sbjct: 183 AFIV----ESDTP-GITLGKIDKKMGQKGAHTCDVIFDNCVVPADALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A S L +A+HYA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAAASTGAATRMLDDALHYAVERKQFGQPIANFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ + DE K E++ A++ A +M V A++ GG+GYI + Sbjct: 297 KSMVLDASRLRDEGKDVVTESSCAKMFA-------TEMCGRVADRAVQIHGGAGYIADYG 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|75759071|ref|ZP_00739178.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900468|ref|YP_002448879.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228905096|ref|ZP_04069128.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] gi|74493470|gb|EAO56579.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542511|gb|ACK94905.1| acyl-CoA dehydrogenase [Bacillus cereus G9842] gi|228854539|gb|EEM99165.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222] Length = 381 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|195998726|ref|XP_002109231.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens] gi|190587355|gb|EDV27397.1| hypothetical protein TRIADDRAFT_20833 [Trichoplax adhaerens] Length = 633 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 33/298 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------- 249 LTE G+D +I ++ SDG Y L+G+K W + ++D + AQV Sbjct: 195 LTEPSSGSDANSIQTKAVLDSDGKHYILNGNKIWISNGGLADVMTVFAQVPFQSSDSEKV 254 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 RV F+V R G NG + K+G RS+ T + F N +LG V Sbjct: 255 SQRVTAFIVERDF-GGVTNGPP----EKKMGIRSSNTASVYFDNVKVPVENVLG--KVGD 307 Query: 307 GPVEDMKILIYLDSAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M IL + +SG+ R+ +A++I +A R LI+ ++ IA +A+ Sbjct: 308 GFKVAMNILNNGRFGMGAGMSGLIRMLIAKSIEHANNRVQFRRKLIEYQSIQEKIAKMAI 367 Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A ++++ ++N+ D K EAA ++++ + + C E ++ +GG G Sbjct: 368 THYAVESVAYAVSNNMDRGIKEYQVEAAISKVLGSESGWNTCD-------ECLQILGGIG 420 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSG 480 Y+ E +I R R+ I G+ + + L + LN ++ N ++L +++ + + G Sbjct: 421 YMREANIERFMRDLRIFRIFEGTNDILRLFIALNGVQYAGNHLKELQKAMKEPISNFG 478 >gi|118591690|ref|ZP_01549086.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] gi|118435683|gb|EAV42328.1| Acyl-CoA dehydrogenase [Stappia aggregata IAM 12614] Length = 524 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 14/257 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV--EGRVG 254 LTE G+D++ I + + DG + +SG K F+S D ++LA+ EG G Sbjct: 158 LTEPDAGSDLSRIRCRAVQAGDG-WSISGEKIFISGGDQDMSEKIYHLVLARTSDEGVKG 216 Query: 255 C--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 FL P DGS N + R++ K+G ++ T +L F L+G + M Sbjct: 217 LSLFLCPCTRADGSRNAVTVTRIEEKMGLHASPTCQLAFDGAMAELIGREGEGLKAMFTM 276 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI--ALDIAAAT 370 +D A+ V+ + A YA R G +PV D+ LD A Sbjct: 277 MNHARVDVALQGVAHAARAADIASAYAAERK-QGRDAAGKPVTLDGHVDVRRMLDEIDAL 335 Query: 371 ALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL R +A+ E A A + PI K +C + M+ +GG GY++E Sbjct: 336 ALGGRAIAHLALVTVEAGENRALAEFLTPIAKTFCTQAGMQATELGMQVLGGYGYLKEYF 395 Query: 430 IARHYRESPANSILLGS 446 + + YR+ +I G+ Sbjct: 396 LEQCYRDVRITAIYEGA 412 >gi|315110486|gb|EFT82462.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL030PA2] Length = 382 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|226366182|ref|YP_002783965.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226244672|dbj|BAH55020.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 386 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 34/278 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ + D + L+G K F+++ + +D I++A + G Sbjct: 130 IAMTEPGTGSDLQGIKTRAVRDGDD-WVLNGSKTFITNGINADLVIVVACTDPDKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306 L+ + G R +KIG ++ T EL F++ GFL N+ Sbjct: 189 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFLYLMKNL-- 246 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 P E + I A+++ + M +L I Y R R G + + +A++A + Sbjct: 247 -PQERLSI------AVVAAAAMESALDMTIQYCRDRKAFGKSIGSFQNTRFVLAELATEA 299 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A L + ++ K +EAA A K+W + +I ++ GG GY++ Sbjct: 300 TAVRVLVDKFIELLNDEKLSVQEAAMA-------KWWTTEAQVRLIDRCLQLHGGYGYMK 352 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E IA+ Y +S +I G+ M ++ +G NL Sbjct: 353 EYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 386 >gi|241087444|ref|XP_002409197.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis] gi|215492666|gb|EEC02307.1| medium-chain acyl-CoA dehydrogenase, putative [Ixodes scapularis] Length = 429 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 28/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-------EG 251 L ++E G+D+A++ QK D Y L+G K W + P++D + A+ + Sbjct: 168 LAMSEAGSGSDVASMKLSAQKDGDH-YILNGTKFWITNGPLADVLFVYARTNPSAAKPQH 226 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + F++ E +P Q+L +K+G R + T EL F + L+G+LN G Sbjct: 227 GISAFII----EKNTPGFSIGQQL-DKLGMRGSPTSELVFEDCRIPAKNLVGELN--KGM 279 Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M L Y L A V M+ S A Y R G + +++ IAD+ + Sbjct: 280 YVLMSGLDYERLVLAAGPVGIMQASCDIAFEYVHTRKQFGKPIGSFQLLQGKIADMYTTL 339 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + + A + D+ S++ A + +C + A V +A++C+GG+GYI Sbjct: 340 NACRSYLYSTARAVDQGHVLSKDCAGVIL-------YCAEKATQVALDAIQCLGGNGYIN 392 Query: 427 ERSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 393 DYPTGRLLRDAKLYEIGAGT 412 >gi|72160472|ref|YP_288129.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] gi|71914204|gb|AAZ54106.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX] Length = 391 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 L+E G+D AA+T++ ++ D Y L G K W +D + ++A+ + CF Sbjct: 127 LSEPHAGSDPAAMTTRARRDGDH-YILDGVKAWITHGGQADFYTVMARTSDDRSRGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVP GL R + K+G ++ T L F + D + L Sbjct: 186 LVP-----ADTPGLSADRPERKMGLTASHTTMLRFDGVR--IPADQRIGAEGQGLSIALS 238 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + LA+A + YAR+R G +I+ + +AD+A + A A Sbjct: 239 SLDAGRLGIAAVATGLAQAALDTAVDYARQREAFGKPIIEHQGLAFLLADMAAAVETARA 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + R A D S+EA+ A+++A A V +A++ +GG GY + + Sbjct: 299 ATLRAARLKDSGLPYSKEASIAKLIA-------TDNAMRVTTDAVQVLGGYGYTRDFPVE 351 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 352 RYMREAKVMQIFEGT 366 >gi|53720357|ref|YP_109343.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|52210771|emb|CAH36755.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei K96243] Length = 413 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 25/254 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K+ G Y LSG K W +SP++D F++ A Sbjct: 143 PKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITNSPIADVFVVWA 201 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +++ + +LE G GL + K+G R++ T E+ F +L + Sbjct: 202 KLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKG 260 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAI 359 GP L+SA ++ + AE+ H AR+ R G L ++++ + Sbjct: 261 LRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKL 314 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I RL DE + E + I K C A + A + + Sbjct: 315 ADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDML 367 Query: 420 GGSGYIEERSIARH 433 GG+G +E +ARH Sbjct: 368 GGNGISDEFGVARH 381 >gi|304311065|ref|YP_003810663.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301796798|emb|CBL45010.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 606 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 134/302 (44%), Gaps = 41/302 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ + ++ + +DG Y ++G K F+S D I+LA++ Sbjct: 165 LTEPQCGTDLGQVKTRAEPNADGSYSITGTKIFISGGDHDLTDNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ D G N + +++K+G +++AT + F G+L+G N Sbjct: 225 RGISLFIVPKHRPDAAGNTGEFNNVHCGSIEHKMGIKASATCVMNFEGATGYLIGPPNKG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ---PVM--- 355 + + +++ + ++ A+ YA+ R +SG D+ P++ Sbjct: 285 LQCMFTFMNTARVGTSVQGLGCSELAYQGALPYAKERLSMRALSGKTAPDKVADPLISHG 344 Query: 356 --------KRAIAD--IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 ++A A+ A+ AA + +A E + +++ + M PI K + Sbjct: 345 DVRRMLLTQKAFAEGGRAMIYYAAKIADYMMAGETQEDRDAADD--HLGFMTPILKAFLT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGT 462 + M+ GG GYI+E + + R++ +++ G+ LD+L LL+KG Sbjct: 403 ETGLESANIGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGIQALDLLGRKILLQKGK 462 Query: 463 NL 464 + Sbjct: 463 SF 464 >gi|229158903|ref|ZP_04286960.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] gi|228624514|gb|EEK81284.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 4342] Length = 381 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|187776881|ref|ZP_02993354.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC 15579] gi|187775540|gb|EDU39342.1| hypothetical protein CLOSPO_00420 [Clostridium sporogenes ATCC 15579] Length = 379 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 24/269 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + +G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKEMSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D + ++ + +AE A+ Y + R G L ++ IAD+ + + AA Sbjct: 239 L---DGGRIGIAAQALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++ + +AA A++ A T + V ++++ +GG GY ++ Sbjct: 296 KYLVYKSAWKKSTGENYTMDAAEAKLYAAETAMY-------VTNKSLQVLGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + R R++ I G+ + + N L Sbjct: 349 LERMLRDARITEIYEGTSEVQKMVIANNL 377 >gi|33599571|ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567167|emb|CAE31081.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 385 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 70/318 (22%), Positives = 150/318 (47%), Gaps = 44/318 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +++ + T++ +A + TP+ + P I E + + +TE G+D Sbjct: 94 ILTQTDTASPPIAAVGTPQQKARYLPAIVRGE-------------CLVAIAMTEPDVGSD 140 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR------VGCFLVPRLLE 263 IA + ++ + D + L G K F+++ + +D +++ A+ + V FLV + Sbjct: 141 IATLRTRAVRDGDE-WVLDGAKTFITNGVHADLYVVAARTDASARPSQGVSLFLV----D 195 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP----VEDMKILI 316 G+P GL +R +K+G +S+ T +L F G LLG+ N V++ ++++ Sbjct: 196 KGTP-GLRVERRLDKMGWKSSDTAQLSFDGCRVPAGALLGEPNRGFAALMRNVQNERLVL 254 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 A ++ + ++A+ + Y R R G L D+ ++ +A +A + +A + + Sbjct: 255 ----AAQALGESQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARHFVYSV 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A + D +R E M K C ++ V+ + ++ G +GY++ ++ R YR+ Sbjct: 311 A-ALD---ARGVECVKEVSM---IKALCGELVNEVMDDCVQFHGATGYMQGTAVERMYRD 363 Query: 437 SPANSILLGSGNAMVLDV 454 + ++I G+ M+ +V Sbjct: 364 ARVHAIGGGATEIMLEEV 381 >gi|321452407|gb|EFX63798.1| hypothetical protein DAPPUDRAFT_267664 [Daphnia pulex] Length = 263 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 13/252 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 1 MSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTA 59 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 L + G + +K+G R + T EL F + + NV G + K+L+ LD Sbjct: 60 FLIEKGMKGFSIAQKLDKLGMRGSHTGELVFQDV---EVPAANVLGGVNQGAKVLMSGLD 116 Query: 320 SAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 ++G M+ + I Y R G + + +++ +AD+ + A + ++ Sbjct: 117 YERAVLTGGPLGIMQSVMDNVIPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSFAY 176 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + D + + R WC + A + E ++ GG+GYI E + R + Sbjct: 177 TVAKNLDMLGT--DHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGRLW 234 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 235 RDAKLYEIGAGT 246 >gi|317507482|ref|ZP_07965208.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974] gi|316254220|gb|EFV13564.1| acyl-CoA dehydrogenase [Segniliparus rugosus ATCC BAA-974] Length = 611 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 56/327 (17%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K+W I + +D T + LTE G+D+ A ++ + DG + + G Sbjct: 146 QKEWCKVIAAGNWDAT-------------MVLTEADAGSDVGAGRTKATEQPDGTWHIEG 192 Query: 231 HKWFLSSPMS-DAF-----IMLAQVEGRVG------CFLVPRLLED------GSPNGLCY 272 K F+S S D F ++LA+ G G F VP+ D G NG Sbjct: 193 VKRFISGATSGDLFENIFHLVLARPVGAKGGTKGLSLFFVPKYHYDFKTQTRGERNGAFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 L++K+G +++ T E+ F G+L+GD++ + D+ + I S + + Sbjct: 253 TNLEHKMGIKASTTCEIAFGQHGVPAVGWLVGDVHNGIAQMFDVIENARMTVGIKSTATL 312 Query: 329 RVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAIADIALDIAAATALSFR 375 + A+ +A+ R V G ++ P ++R++ + AL Sbjct: 313 STAYLNALEFAKER-VQGSDFTEMMNKDAPRVTIMRHPEVRRSLLEQKAYAEGLRALYLL 371 Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A D A + ++ AY + P+ K + + +AE+++ GGSG++++ Sbjct: 372 TATYQDPAAAERLFGADKDLAYRVNDFLLPLVKGIGSEQGYSHLAESLQIFGGSGFLQDY 431 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL 455 I ++ R++ +++ G+ LD Sbjct: 432 PIEQYIRDAKIDTLYEGTTAIQSLDFF 458 >gi|126663341|ref|ZP_01734339.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38] gi|126624999|gb|EAZ95689.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38] Length = 389 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + K D Y ++G K F+++ + +D +++ A+ +G V Sbjct: 125 LCITEPFGGSDVAGMRTTAVKKGDS-YVINGSKTFITNGVYADYYVVAAKTTPELGNKGV 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L D +G+ +L +K+G R++ T E+ F N L+G+ + L Sbjct: 184 SIFLVDAKTSGISATKL-DKLGWRASDTAEIAFDNVEIPLENLMGEEGKGFPYIMQHFAL 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L AI + + ++ I Y +R G + ++ + + A ++ ++ Sbjct: 243 ERLIMAINAHARAEYAIDYTIEYMSQREAFGTTINKFQALRHTMVEHATEVEHCKVFNYA 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 ++ + +EA A++ + K+A I ++ +GG GY+EE +AR R Sbjct: 303 AVARLNKGEYVVKEATMAKLKS-------TKVADEAIYSCLQMLGGYGYMEEYPLARLLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|158319150|ref|YP_001511657.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139349|gb|ABW17661.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii OhILAs] Length = 379 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + DG Y L+G K F+++ +D +I++A + G Sbjct: 123 FGLTEPNAGTDASA--QQTIAVLDGDHYILNGSKIFITNAGYADIYIIMAMTDKSQGTRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 + + + G + ++K+G + ++T EL F N LLG G MK Sbjct: 181 ISAFIVEADTPGFSIGKKESKLGIKGSSTCELVFENCRIPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + ++ + +A E + Y + R G + + +AD+A I AA Sbjct: 239 ---LDGGRIGIAAQALGIAQGALDETVSYVKERKQFGKSISYFQNTQFQLADMATKIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A E S EAA A++ A T A V +A++ GG GY E Sbjct: 296 RLLVYKAAFLKQEGLPYSNEAAMAKLFASET-------AMEVTVKAVQLHGGYGYTREYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|302820126|ref|XP_002991731.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii] gi|300140412|gb|EFJ07135.1| hypothetical protein SELMODRAFT_448534 [Selaginella moellendorffii] Length = 416 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 116/252 (46%), Gaps = 14/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ G Y L+G+K W + P+++ I+ A+ + G + Sbjct: 158 LVMSEPNSGSDVVSMKCKAERRDKG-YVLNGNKMWCTNGPVANTLIVYAKTDNSAGAHGI 216 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G + +K+G R + T EL F + F L V M + L Sbjct: 217 TAFIIEKGMEGFTTAQKLDKLGMRGSDTCELVFQDCFVPPENILGQEGKGVYVMMSGLDL 276 Query: 319 DSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + +++ SG M+ + + Y R+R G + + +++ +AD+ + A+ AL Sbjct: 277 ERLVLA-SGPLGLMQACMDVVLPYVRQREQFGKPIGEFQLIQGKLADMYTKMQASRALVH 335 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A S D ++ A A + + + A + +A++C+GG+GY+ E R Sbjct: 336 SVARSCDAGHIDRKDCAAAILFSS-------ENATQMALQAIQCLGGNGYVNEYPTGRLL 388 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 389 RDAKLYEIGAGT 400 >gi|256380219|ref|YP_003103879.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255924522|gb|ACU40033.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 383 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 37/279 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252 GLTE GG+D A+ + ++ DG + L+G K F+++ + + + +A V GR Sbjct: 124 FGLTEPGGGSDAGALRTTA-RLEDGQWVLNGTKAFITNSGTSITSLVTVAAVTGRKPDGR 182 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 + +VP G+P GL +K+G ++ T EL F + LLG+ Sbjct: 183 PEISTIIVP----AGTP-GLAVGSKYSKVGWNASDTHELSFQDCRVPEANLLGERGRGY- 236 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + L LD ++++ + V LA E + YA+ R G + ++ IAD+ Sbjct: 237 ----AQFLRTLDEGRVAIAALGVGLAQGCVDECVRYAKEREAFGSPIGRYQAIQFKIADM 292 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + + A ++ A+ + EAA A++++ + A E + GG Sbjct: 293 EVRVHTARLAYYQAASKMLRGEPFKREAAIAKLVS-------SEAAMDNAREGAQVFGGY 345 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G++ E + R YR+ A + +G G + V +L E G Sbjct: 346 GFMNEYPVGRFYRD--AKILEIGEGTSEVQRMLIARELG 382 >gi|228988569|ref|ZP_04148656.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771186|gb|EEM19665.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 381 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 129 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 188 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 236 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 237 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 297 EAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 349 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 DYPVERFFRDAKITQIYEGT 369 >gi|146340123|ref|YP_001205171.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146192929|emb|CAL76936.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 381 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 78/362 (21%), Positives = 142/362 (39%), Gaps = 39/362 (10%) Query: 116 HCSIWD--RSFEPVVRKQAHKIRAARLYL--------MAQLEAGHLMSPSVTSASMVALM 165 H WD + F V ++A + +Y+ + +L+A + T V+ Sbjct: 27 HALRWDEDKHFPVDVMREAAALGMGGIYIRDDVGGSGLTRLDAALIFEALATGCPTVSAF 86 Query: 166 TTPRVHKDWAPKIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 + W F E P + + LTE G+D AA+ ++ + D Sbjct: 87 ISIHNMASWMIDTFGTEAQRQEYLPKLCPMDLIASYCLTEPGAGSDAAALRTRAVRDGDD 146 Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y ++G K F+S + ++ G G + L+ D G+ + + K+G + Sbjct: 147 -YVINGQKQFISGAGATDILVAMVRTGADGPGGISTLVIDAKTPGVSFGANERKMGWNAQ 205 Query: 285 ATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 T + F N GF + + G L+ A S+ G + +L Sbjct: 206 PTRAVIFENARVPVANRLGEEGIGFKIAMAGLDGG---------RLNIAACSLGGAQAAL 256 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + + Y R R G L + ++ IAD+A+++ AA +R A + D + A Sbjct: 257 DKTLAYTRERKAFGKRLDEFQALQFRIADMAIELEAARTFLWRAAAALD------HKDAD 310 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A ++ + K + + V +A++ GG GY+ E I + R+ + IL G+ M L Sbjct: 311 ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYGIEKIVRDLRVHQILEGTNEIMRL 370 Query: 453 DV 454 V Sbjct: 371 IV 372 >gi|126729532|ref|ZP_01745345.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37] gi|126709651|gb|EBA08704.1| isovaleryl-CoA dehydrogenase [Sagittula stellata E-37] Length = 386 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 130/271 (47%), Gaps = 36/271 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRND-RYVLNGNKYWITNGPDADTLVVYAKTDPDAGPKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + S G +K+G R + T EL F + F +LG + +++L Sbjct: 187 TAFLVEKSMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGQEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++G M + E + Y R RH G + +M+ IAD+ + +A Sbjct: 241 MSGLDYERVVLAGIGLGIMAACMDEIMPYLRDRHQFGKPIGSFQLMQGKIADMYTAMNSA 300 Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGY 424 A + +A + D + +R++ AA CC + A +A++ +GG+G+ Sbjct: 301 RAYVYEVAKACDRGEVTRADAAA------------CCLYASEEAMKQAHQAVQAMGGAGF 348 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455 + + ++AR +R+ A + +G+G + + +L Sbjct: 349 LNDAAVARIFRD--AKLMEIGAGTSEIRRML 377 >gi|83859544|ref|ZP_00953064.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83851903|gb|EAP89757.1| acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 388 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 39/289 (13%) Query: 176 PKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234 PK+ S EY +G + +TE G+D+ I + K +G Y ++G K F Sbjct: 121 PKLISGEY--------------VGAIAMTEPGAGSDLQGIKTTAVKDGNG-YKINGSKTF 165 Query: 235 LSSPMSDAFIML-AQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +++ + FI++ A+ + G G L L+E +G R +K+G +S T EL Sbjct: 166 ITNGGTANFIVVVAKTDPKGGAKGTSLF--LVETDGLDGFRRGRNLDKVGMKSQDTAELF 223 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345 F + LLG+ G + M+ L L A+ +V M+ +LAE I Y + R Sbjct: 224 FEDMKVPAEALLGEAE-GQGFFQLMEQLPQERLQIAVQAVGMMKRALAETIAYVKERQAF 282 Query: 346 GGILIDQPVM--KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +PVM + +A + AT + + D +AA A + KYW Sbjct: 283 G-----KPVMGFQNTQFKLAELKSKATIAEVFVQHCSDLLIKGQLDAA----TASMAKYW 333 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + +I E ++ GG G++ E IAR +R+S I G+ M L Sbjct: 334 TTDIQCELIDECVQLHGGYGFMNEYPIARMWRDSRVQRIYGGTNEIMKL 382 >gi|228312334|pdb|3GQT|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment (1,4-Dimethyl-1,2, 3,4-Tetrahydroquinoxalin-6-Yl)methylamine gi|228312335|pdb|3GQT|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment (1,4-Dimethyl-1,2, 3,4-Tetrahydroquinoxalin-6-Yl)methylamine gi|228312336|pdb|3GQT|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment (1,4-Dimethyl-1,2, 3,4-Tetrahydroquinoxalin-6-Yl)methylamine gi|228312337|pdb|3GQT|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment (1,4-Dimethyl-1,2, 3,4-Tetrahydroquinoxalin-6-Yl)methylamine gi|251836940|pdb|3GNC|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment 6421 gi|251836941|pdb|3GNC|B Chain B, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment 6421 gi|251836942|pdb|3GNC|C Chain C, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment 6421 gi|251836943|pdb|3GNC|D Chain D, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment 6421 Length = 399 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 118 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 176 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 177 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 235 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +L + GP L+SA ++ + AE+ + R++V G Sbjct: 236 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 289 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 290 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 342 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 343 LDIARLARDMLGGNGISDEFGVARH 367 >gi|313205895|ref|YP_004045072.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|312445211|gb|ADQ81566.1| acyl-CoA dehydrogenase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|315022207|gb|EFT35235.1| acyl-CoA dehydrogenase domain protein [Riemerella anatipestifer RA-YM] gi|325336665|gb|ADZ12939.1| Acyl-CoA dehydrogenase [Riemerella anatipestifer RA-GD] Length = 379 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 115/290 (39%), Gaps = 44/290 (15%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 K S E P+ V L+E G+D + + + D Y L+G K W Sbjct: 100 KYASEEQKQKYLVPLASGEVIGAFALSEPEAGSDATSQKTTAEDKGD-YYLLNGTKNWIT 158 Query: 236 SSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + + +I++AQ G F+V R E G ++K+G R Sbjct: 159 NGSTATYYIVIAQTHPEKGHKGINAFIVERGWE-----GFEIGPKEDKMGIRG------- 206 Query: 291 FSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AI 336 S+T L D+ V P E+ + A+ ++G R+ +A A+ Sbjct: 207 -SDTHSLLFTDVKV---PKENRIGEDGFGFKFAMAVLNGGRIGIASQALGIASGAYELAL 262 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA+ R G +I+ + +AD+A I AA L + A D+ K SE A A++ Sbjct: 263 KYAKERKAFGTEIINHQAVAFKLADMATQITAARMLCLKAAAEKDQGKDISESGAMAKLF 322 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A K A EA++ GG GY+ E + R R++ I G+ Sbjct: 323 A-------SKTAMDTTIEAVQIHGGYGYVREYHVERMMRDAKITQIYEGT 365 >gi|221640794|ref|YP_002527056.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161575|gb|ACM02555.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides KD131] Length = 403 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K ++G Y L G K W ++P++D F++ A+ E G++ Sbjct: 145 FGLTEPDAGSDPAGMKTVARKTAEG-YVLHGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F +LE G GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +H AR+ R G L + + +A++ DIA Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A A + GG+G EE Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367 Query: 430 IARH 433 + RH Sbjct: 368 VMRH 371 >gi|187933914|ref|YP_001884609.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum B str. Eklund 17B] gi|187722067|gb|ACD23288.1| butyryl-CoA dehydrogenase [Clostridium botulinum B str. Eklund 17B] Length = 379 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q I DG Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAILDGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + S G +L++K+G R ++T EL + L+G G MK Sbjct: 181 ISAFIVEKSFPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D + ++ + +AE A++Y + R L Q ++ IA++ + I AA Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A + S +AA A++ A ++A V +A++ GG GY ++ Sbjct: 296 RHLVYKAACKKQNGQPYSVDAARAKLFA-------AEVAMDVTTKAVQIFGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|149375973|ref|ZP_01893740.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149359853|gb|EDM48310.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 388 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + D Y L+G K W + P ++ +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLSAKDAGD-HYVLNGSKMWITNGPDANVYVIYAKTDPSAGPRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + NV G K+L+ Sbjct: 189 TAFIVERDTPGFSQAQKLDKLGMRGSNTCELVFEDA---KVPKENVMGGEGNGAKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ ++ + Y R R G + + +++ +AD+ + A + Sbjct: 246 LDYERLVLSGGPLGIMQAAMDVVVPYIRERKQFGQAIGEFELVQGKVADMYTWMNTAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D + ++AA A + + +MA + +A++ +GG+GYI E R Sbjct: 306 VYMVAMSADRGNTTRKDAAGAIL-------YSAEMATKLALDAIQLLGGNGYINEYPTGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|333028169|ref|ZP_08456233.1| putative acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. Tu6071] gi|332748021|gb|EGJ78462.1| putative acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. Tu6071] Length = 389 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P + I LTE GT A IT+ + D Y LSG K ++ + D +++ A+ Sbjct: 110 PSITGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 VEG G LVPR + G+ + N +G L F T LG Sbjct: 168 VEGSAGHEGTMALLVPR-----NAPGVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLG 222 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355 + G D+ + +L + +SV+ V LAE A+ YAR R G L + + Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A+ A DI AA L A F+E +E+A+ MA K M V +A Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEEG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY + + I R YR++ A G+ Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363 >gi|315607671|ref|ZP_07882665.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574] gi|315250607|gb|EFU30602.1| acyl-CoA dehydrogenase [Prevotella buccae ATCC 33574] Length = 577 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 32/341 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + ++ + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEAENCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRDGGVNVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E + YA+ R G +I P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGQKIIHFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D +A+ R+E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDIYKALEDISRDRKLDAEERAEMKKYNRLADAFTPLAKGMNSEYANQNAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT------NLFEQLF 469 + GGSG+I E R +R++ SI G+ V+ + + GT + E Sbjct: 409 ISIHGGSGFIMEYKSQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYLSIIKEMLEAPV 468 Query: 470 STLEQDLGSSGKKVITILRDSISLCKE--DKGLARFLTEKI 508 Q L S K++ + ++++ KE ++ L FL ++ Sbjct: 469 CDSLQPLRSRVAKLVALYEEAVNHVKEADNQELHDFLGRRL 509 >gi|226364663|ref|YP_002782445.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226243152|dbj|BAH53500.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 611 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/318 (22%), Positives = 135/318 (42%), Gaps = 56/318 (17%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA I R + T + LTE G+D+ A ++ K DG + + G Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192 Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRLL------EDGSPNGLCY 272 K F++S SD ++LA+ EG + F VP+ E G NG Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETNEFGERNGAFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +++K+G + +AT E+ F G+L+G+++ + D+ + +++ + Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312 Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375 A+ YA+ R V G L P ++RA+A A+ Sbjct: 313 STGYLNALEYAKER-VQGADLTQMTDKAAPRVTITHHPDVRRALAMQKAYAEGLRAVYLY 371 Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A DEA ++ ++ A+ ++ PI K + A + ++++ GGSG++++ Sbjct: 372 TAAHQDEATAKLVSGADKDLAFRVNDLLLPIVKGVGSERAYQYLTDSLQTFGGSGFLQDY 431 Query: 429 SIARHYRESPANSILLGS 446 I ++ R++ +S+ G+ Sbjct: 432 PIEQYIRDAKIDSLYEGT 449 >gi|294141872|ref|YP_003557850.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] gi|293328341|dbj|BAJ03072.1| acyl-CoA dehydrogenase family protein [Shewanella violacea DSS12] Length = 385 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G+ G + + Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGATELLVVMCRTGQDGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + G+ Y + ++K+G + T E+ FS LLG+ G MK L Sbjct: 183 VVPADAKGVTYGKAEDKMGWNAQPTREITFSEVRVPVTNLLGEEG--QGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L A Y R G + ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERATQYMTERKQFGKPIATFQALQFKLADMATELVAARQI-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E +AY + K + + V A++ GG GYI E + RH R+ Sbjct: 300 A-AFKLDCGDPEASAYC----AMAKRFATDIGFQVCDAALQLHGGYGYIREYPLERHVRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|260834039|ref|XP_002612019.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae] gi|229297392|gb|EEN68028.1| hypothetical protein BRAFLDRAFT_124791 [Branchiostoma floridae] Length = 411 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ + D + L+G K W +S + A ++ A + + Sbjct: 147 FALSEPGNGSDAGAASTVARLEGDH-WVLNGTKAWITNSYEASATVVFATTDKGLKHKGI 205 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP E GL + ++K+G R+ +T L F + + N+ P K Sbjct: 206 SAFLVPMPTE-----GLTLGKKEDKLGIRATSTAYLIFEDC---KIPKENLLGKPGMGFK 257 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++ + +A+A + YA +R G + ++ +AD+ + + Sbjct: 258 IAMQTLDAGRIGIASQGLGIAQAALELAVDYAMKREAFGSPIAKLQSVQNKLADMHMSVE 317 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L+++ A D K+ +EAA A++ A +C + ++ +GG GY+ + Sbjct: 318 SARLLTWKAAAYKDAGKNYIKEAAMAKLAASEAATFCAH-------QCIQVLGGMGYVTD 370 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R+YR++ I G+ L + L K Sbjct: 371 MPAERYYRDARITEIYEGTSEVQRLVIAGRLLK 403 >gi|220923545|ref|YP_002498847.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219948152|gb|ACL58544.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 376 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ K LTE G+D AA+ ++ +++ D + LSG K F++S +D I+ A Sbjct: 110 PLAKGEKLAAFCLTEPSAGSDAAALKTRARRVGD-RWILSGTKQFITSGRNADVAIVFAV 168 Query: 249 VE---GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + G+ G F+VP G RL++K+G R++ T ++ F T +LG Sbjct: 169 TDPAAGKKGISAFVVPT-----DTPGYTVARLEHKLGQRASDTAQIVFEEMELTPDLMLG 223 Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L ++ +E +I I A +V R + A A+ YA R G L + Sbjct: 224 REGDGLRIALANLEGGRIGI----AAQAVGMARAAFAAALAYAGERETFGQKLTGHQAVA 279 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I AA L A D + +EAA A++ A +MA AV ++A+ Sbjct: 280 FRLADMATRIEAARLLVLNAARLRDAGQPCLKEAAMAKLFA-------SEMAEAVCSDAI 332 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + + YR+ I G+ + Sbjct: 333 QIHGGYGYLADYPVEQIYRDVRVCQIYEGTSD 364 >gi|297585456|ref|YP_003701236.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus selenitireducens MLS10] gi|297143913|gb|ADI00671.1| acyl-CoA dehydrogenase domain protein [Bacillus selenitireducens MLS10] Length = 380 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A++ + +K D Y L+G K W + +D +I+ A+ + G + Sbjct: 123 FALSEPGAGSDAASLRTTAKKDGDH-YILNGSKAWITNGGYADTYIVFAKTDPDAGKKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVST 306 + + G + K+G ++T L F + G+ + N+ Sbjct: 182 TAFIVEKDTPGFTVLAKERKMGLLGSSTTGLAFEDCRIHESRRLGEEGQGYTIALSNLDY 241 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G V A ++ +L A YA+ R G + Q + +AD+A + Sbjct: 242 GRV---------GIAAQALGIAEAALEHATDYAKERKQFGKPIAMQQGLAFKLADMATAV 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++ AN D+ + EA+ A+ A T A V EA++ GG GY + Sbjct: 293 EAAKLLTYSAANRKDQGLTTGIEASMAKTFASDT-------AMKVTTEAIQVFGGYGYTK 345 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 346 DYPVERFFRDAKVTQIYEGT 365 >gi|167644103|ref|YP_001681766.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167346533|gb|ABZ69268.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 387 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 43/300 (14%) Query: 175 APKIF--SREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 AP IF E P T +G + +TE G+D+ I S + + D Y ++G Sbjct: 103 APYIFHYGTEEQKQRWLPRLCTGELVGAIAMTEPGAGSDLQGIKSSAKVVGDQ-YVINGS 161 Query: 232 KWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 K F+++ + I++ G G L+ ++E G R +K+G+ + T Sbjct: 162 KTFITNGQTANLIIVVVKTDPTAGARGTSLI--VVETDGAEGFERGRNLDKLGHEAQDTS 219 Query: 288 ELEFSNT---------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 EL F++ F L+G L P E + I A+ ++ + +L Sbjct: 220 ELFFNDVKVPTENLLGSDEGQGFFQLMGQL-----PQERLNI------AVQGMATIERAL 268 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 I Y ++R G +ID + +A+ + A N E + E A Sbjct: 269 ELTIDYVKQRKAFGKAIIDFQNTQFVLAECKTEATVAKVF----VNHCIERHLKGELDAA 324 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 MA KYW + ++ ++ GG G++ E IAR YR+S I G+ M L Sbjct: 325 TASMA---KYWVSDLENKIVDRCLQLFGGYGFMNEYPIARMYRDSRVQRIYGGTNEIMKL 381 >gi|110347269|ref|YP_666086.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110287445|gb|ABG65503.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 381 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 30/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--- 246 P+ + + LTE G+D+ + ++ + G + L G K F+S FI++ Sbjct: 112 PVVSGELTVAYALTEPDAGSDLGGLKTRASRTGAG-WVLRGAKQFISGADYADFIIVLAV 170 Query: 247 ----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR-------SNATVELEFSNTF 295 A + R F+VPR S G Y K+G R S EL S+ Sbjct: 171 TDLAAPLRSRFTLFIVPR-----SNPGFKYSGNFRKMGWRGYQLGAFSLEDCELPESHVL 225 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G + G + +I M+ +R+ A +Y R R G L D + Sbjct: 226 GEVGGGFAAMMATINTTRIEYSARYVGMADELLRL----ARNYVRERQAFGSRLADHQAI 281 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD ++ A+ L++R A DE R+ +K + +M V Sbjct: 282 QFMLADSDCEVEASRLLTYRAATLADEGDPSF------RVAGSRSKLYASEMVGRVADRV 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG+GY+ + + R YR++ A I G+ Sbjct: 336 LQIFGGAGYMCDWPVERMYRDARAFRIGEGT 366 >gi|330825434|ref|YP_004388737.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329310806|gb|AEB85221.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 388 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-------VG 254 LTE G+D A+I ++ + + G Y ++G K F+S S ++L G + Sbjct: 124 LTEPGSGSDAASIKTRAELVG-GEYVINGGKAFISGAGSTHVLVLMARTGDAQSGAAGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP L G+ Y + + K+G S T ++ F N + N+ E KI Sbjct: 183 AFAVPADLP-----GIHYGKKEEKMGWNSQPTRQISFDNV---RIPAQNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +LA A Y + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQALQFKLADMATELIA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + RLA S +A +R A + K + V+ EA++ GG GYI E Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 + R R++ + IL G+ M Sbjct: 349 PLERLLRDARVHQILEGTNEIM 370 >gi|313794157|gb|EFS42177.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA1] gi|315078300|gb|EFT50339.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL053PA2] gi|327457590|gb|EGF04245.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL092PA1] Length = 382 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|126728635|ref|ZP_01744450.1| acyl-CoA dehydrogenase [Sagittula stellata E-37] gi|126710565|gb|EBA09616.1| acyl-CoA dehydrogenase [Sagittula stellata E-37] Length = 379 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 34/266 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ QK ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRAQKTNEG-YVLNGTKAFISGGGYSDAYVTMVRTGEDGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +EDG+P GL + ++K+G RS T +++F + L+G E+ K Sbjct: 183 --YIEDGTP-GLSFGAAEDKMGWRSQPTAQVQFDDCTIPHDNLIG---------EEGKGF 230 Query: 316 IY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 Y LD +++S + A+ + Y R G + ++ +AD+ +++ Sbjct: 231 RYAMAGLDGGRLNISACSLGAAQTALTLTLQYMSERKAFGQSIDQFQALQFRLADMEIEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D A A + K + + + + ++ GG GY+ Sbjct: 291 QAARTFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSRTVDQCLQLHGGYGYLA 344 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 + I + R+ + IL G+ M L Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIMRL 370 >gi|50084817|ref|YP_046327.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49530793|emb|CAG68505.1| glutaryl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 408 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 124 FGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGG-YRLTGAKMWITN 182 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ EG VG + +LE G +GL + K+G R++ T E+ N Sbjct: 183 SPIADVFVVWAKEVSSEGHVGE-IRGFILEKGW-DGLSAPAIHGKVGLRASITGEIVMDN 240 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 241 VFVPEENAFPEVRGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTARQYTLDRKQF 294 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +I+ ++ R DE + E + + K C Sbjct: 295 GRPLAANQLIQKKLADMQTEISLGLQVALRFGRMKDEGIAAVEGTS-------LIKRNNC 347 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 348 GKALEIARLARDMMGGNGISDEFGVARH 375 >gi|145221034|ref|YP_001131712.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145213520|gb|ABP42924.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 611 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 47/289 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + L G K F+++ +D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLDGVKRFITNGDADDLFENIVHVVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F+VP+ D G NG+ L++K+G +++AT EL F G+L+ Sbjct: 224 TKGLSLFIVPKFHFDPQTGDLGERNGVFVTGLEHKMGLKASATCELTFGQHGVPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351 D + +G + K++ Y + +++ + A+ YA+ R + G +I Sbjct: 284 NDTH--SGIAQMFKVIEYARMMVGTKAIATLSTGYLNALAYAKTR-IQGADMIQMTDKTA 340 Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD----EAKSRSEEAAYARI---MA 397 P ++RA+ AL A D + S ++ A R+ + Sbjct: 341 PRVTIMHHPDVRRALMTQKAYAEGLRALYLYTAAHQDTTVADIVSGADAAMAGRVNDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 PI K + A + E+++ GGSG++++ + ++ R++ +S+ G+ Sbjct: 401 PIVKGVGSERAYQCLTESLQTFGGSGFLQDYPVEQYIRDAKIDSLYEGT 449 >gi|313813966|gb|EFS51680.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL025PA1] Length = 382 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|289756310|ref|ZP_06515688.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis EAS054] gi|289696897|gb|EFD64326.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE5 [Mycobacterium tuberculosis EAS054] Length = 537 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + +DG + + G K F++S S D F ++LA+ EG Sbjct: 90 LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 149 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + + VP+ L E G P NG+ +++K+G + +AT EL F G+L+ Sbjct: 150 TKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGWLV 209 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 210 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALQYAKSR-VQGADLTQMTDK 264 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 265 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVKVNDL 324 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M P+ K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 325 MLPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 375 >gi|302518153|ref|ZP_07270495.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB78] gi|318060019|ref|ZP_07978742.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SA3_actG] gi|318077639|ref|ZP_07984971.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SA3_actF] gi|302427048|gb|EFK98863.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB78] Length = 389 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P + I LTE GT A IT+ + D Y LSG K ++ + D +++ A+ Sbjct: 110 PSITGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 VEG G LVPR + G+ + N +G L F T LG Sbjct: 168 VEGSAGHEGTVALLVPR-----NAPGVTVEDTSNTMGVTGTDHASLTFDRTPVPVDHRLG 222 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355 + G D+ + +L + +SV+ V LAE A+ YAR R G L + + Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A+ A DI AA L A F+E +E+A+ MA K M V +A Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEEG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY + + I R YR++ A G+ Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363 >gi|213961958|ref|ZP_03390223.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno] gi|213955311|gb|EEB66628.1| acyl-CoA dehydrogenase [Capnocytophaga sputigena Capno] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 49/303 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ IG G+TE G+D + + K D + L+G K Sbjct: 110 WLPKLASGEW--------------IGAWGITEHNTGSDSGGMATTAVKDGDE-WVLNGTK 154 Query: 233 WFLSSPMSDAFIMLAQVEGRVG------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F++ S ++ G G F V R G + +NK+G R++ T Sbjct: 155 NFITHGKSGDIAVVIARTGEKGDKHGITAFAVER-----GTKGFSAGKKENKLGMRASET 209 Query: 287 VELEFSNTFGFLLGDLN----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIH 337 E+ F + + D N V G ++ MKIL D +S+ + + +A+ ++ Sbjct: 210 AEMIFQDC---RIPDTNRLGAVGDGFIQAMKIL---DGGRISIGALSLGIAKGAYEASLK 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA+ R G LID + +AD+A +I A+ L + A K+ + + MA Sbjct: 264 YAKERMQFGKRLIDLQAVGFKLADMATEIEASELLLHKSAFQ----KNNGQRVTLSGAMA 319 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 K + ++ V EA++ GG GY ++ + + +R+S +I G+ L + Sbjct: 320 ---KMYSSEVCVRVATEAIQIHGGYGYTKDFPVEKFFRDSKLCTIGEGTTEIQKLVITRQ 376 Query: 458 LEK 460 ++K Sbjct: 377 IDK 379 >gi|124003158|ref|ZP_01688008.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] gi|123991256|gb|EAY30687.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] Length = 392 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 17/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCF 256 L ++E GG+D+A + + + D Y ++G K F+++ +S FI+ A + + G Sbjct: 125 LAISEPFGGSDVAGMRTTAVREGDH-YIINGSKTFITNGVSSDFIVAAVKTNPDAKSGG- 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++ D GL +L NK+G R++ T E+ FS+ LLG N + Sbjct: 183 -ISMIVIDRDTPGLTATKL-NKLGWRASDTGEIAFSDVKVPVTNLLGGENQGFYYIMQHF 240 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L L AI ++ +L + Y R G + ++ +A +A +I Sbjct: 241 ALERLMLAIGGMATADYALEVTLKYMDEREAFGRKINRFQALRHRVAQMASEIEMNRMFI 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A+ + + +EAA A+++ +++ V+ + ++ GG G++E+ +AR Sbjct: 301 YAIADRYQQGDYVVKEAAMAKLLG-------TQLSDRVVYDCLQMFGGYGFMEDYPLARM 353 Query: 434 YRESPANSILLGSGNAM 450 YR+S +I G+ M Sbjct: 354 YRDSRLGTIGGGTSEIM 370 >gi|226308416|ref|YP_002768376.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187533|dbj|BAH35637.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 385 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 21/262 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-------AQVEG 251 + +TE G+D+A I + + DG Y L+G K F++ + I++ + Sbjct: 124 IAMTEPGAGSDLAGIKTTARLSGDGSHYMLNGSKTFITGGVQADLILVVARTSPAGDADR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R G + L D + G R K+G R+ T EL F++ LLG+ G Sbjct: 184 RAGLSI---LCVDTTSEGFSVGRKLEKLGLRAQDTAELSFTDVRVPIENLLGEEGAGFGY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L +A+ S + ++ A Y + R V G + K +A+ + ++AA Sbjct: 241 LTRNLVRERLGAAVGSYANASAAIEFATAYVKEREVFGTPVAQFQNTKFVLAECSAEVAA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A R + DE + + A ARI K +C +MA VI + ++ GG GY+ E Sbjct: 301 AQAAVDRALD-LDEIRELTVADA-ARI-----KLFCTEMAGRVIDKCLQLHGGYGYMREY 353 Query: 429 SIARHYRESPANSILLGSGNAM 450 I+R Y ++ N I GS M Sbjct: 354 PISRLYADTRVNRIYAGSSEVM 375 >gi|92118071|ref|YP_577800.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14] gi|91800965|gb|ABE63340.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 24/270 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + D Y L G K F+S + SD ++++ + G + Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDH-YMLDGQKQFISGAGASDLYVVMVRTGGDGPGGISTL 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LI 316 ++E +P G+ + + K+G + T + F N LGD + KI + Sbjct: 183 VVERDTP-GVSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIG------FKIAMA 235 Query: 317 YLDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD +++S G + +L +A+ Y + R G L + ++ +AD+A ++ AA Sbjct: 236 GLDGGRLNISACSLGGAQSALDKALAYMKERKAFGKRLDEFQALQFKVADMATELEAART 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +R A + D E A ++ + K + + V +A++ GG GY+ E I Sbjct: 296 FLWRAACALD------REDTDATMLCAMAKRFATDVGFEVANQALQLHGGYGYLSEYGIE 349 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 + R+ + IL G+ M L V L +G Sbjct: 350 KIVRDLRVHQILEGTNEIMRLIVSRKLIEG 379 >gi|264676529|ref|YP_003276435.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262207041|gb|ACY31139.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 387 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 20/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L+E G+D+AA+ + + D Y ++G K W + ++D +++ + G L Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAAGSRGL 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++E G+P +R+ N I + L+FSN L+G G M+ Sbjct: 189 SALIVEAGTPGFEIAERI-NVIA--PHPLARLKFSNCRVPAAQLVG--AAGEGFKVAMRT 243 Query: 315 LIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L +++ + S G R ++ EA+ A R + GG+L D + + +A +A I +A L Sbjct: 244 LDVFRTSVAAASLGFARRAMDEALQRATSRKMFGGVLADFQLTQAKLAQMATQIDSAALL 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D+ ++ + EAA A++ A + A VI A++ GG G + E+ + R Sbjct: 304 TYRAAWLRDQGENVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGVVSEQPVER 356 Query: 433 HYRESPANSILLGS 446 YRE A I G+ Sbjct: 357 LYREIRALRIYEGA 370 >gi|21221225|ref|NP_627004.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|7544038|emb|CAB87211.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] Length = 385 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 45/274 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251 + +TE G+D+A + S + DG Y L+G K F++ + +D I+ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTDAPTAEDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L D G R +K+G R++ T EL F D+ V PVED Sbjct: 184 RHGISL---FAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229 Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356 + K YL + S G A+ +A++ +V + +PV K Sbjct: 230 LLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQDRTVFGKPVAHFQNTK 288 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A ++ AA A+ R + D + EAA A++ +C ++A VI + Sbjct: 289 FELAACQAEVDAAEAVVDRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCL 341 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E IAR Y ++ N I G+ M Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375 >gi|332141089|ref|YP_004426827.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551111|gb|AEA97829.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] Length = 389 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + F++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLKAEKRGDK-YILNGNKMWITNGPDAHTFVIYAKTDPNAGPKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G RS+ T EL F + + N+ E +++L+ Sbjct: 189 TAFIVERDFPGFSRAQKLDKLGMRSSNTCELVFEDC---EVPAENILGKEGEGVRVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + +++ +AD+ + AA A Sbjct: 246 LDYERLVLSGGPLGIMQSCMDIVVPYIHDRQQFGQSIGQFQLIQGKVADMYTQMNAARAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 306 VYTVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINEYPTGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|302559586|ref|ZP_07311928.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302477204|gb|EFL40297.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 608 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ L D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKHLFDFETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPI 399 P ++R++ AL A+ D + AR ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLHTASVQDAIALKEAAGEDARTEHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + +A++++ GGSG+++E I ++ R+S +++ G+ Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDSKIDTLYEGT 447 >gi|305665430|ref|YP_003861717.1| acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170] gi|88710185|gb|EAR02417.1| Acyl-CoA dehydrogenase-like protein [Maribacter sp. HTCC2170] Length = 392 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + ++ + + D Y L+G K W +SP +D ++ A+ EGR+ + Sbjct: 136 FGLTEPNHGSNPSGMETKFKDMGDH-YLLNGAKLWISNSPFADIAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G K R++AT EL F N + N+ G L Sbjct: 195 VERGME-----GFSTPETHGKWSLRASATGELIFDNV---KVPKENLLPGKNGLGAPLGC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ YA+ R G + + ++ +A++ +I A L Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLL 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +FRL +E K+ + + + A K MA + EA + +GG G + SI R Sbjct: 307 AFRLGQLKNEGKATTAQISMA-------KRNNVDMAIKIAREARQVLGGMGITGDYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|329935741|ref|ZP_08285546.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] gi|329304832|gb|EGG48705.1| acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] Length = 608 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + +DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG+ +++K+G + + T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGVYATNVEHKMGLKVSNTCEMTFGDKHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA+ R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYAKER-VQGPDLANFMDKSAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFD-------EAKSRSEEAAYARIMAPI 399 P ++R++ AL A+ D + + S E A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVMYTASVQDAIQVKEADGEDASAEHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + A +A++++ GGSG+++E + ++ R+S +++ G+ Sbjct: 401 VKGYGSEKAYEQLAQSLQTYGGSGFLQEYPVEQYIRDSKIDTLYEGT 447 >gi|323140382|ref|ZP_08075312.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067] gi|322415138|gb|EFY05927.1| acyl-CoA dehydrogenase [Phascolarctobacterium sp. YIT 12067] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 34/273 (12%) Query: 202 LTEKRGGTDIAAITSQG-QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG----- 254 LTE G+D ++++ +G Y L+G K F+++ +++ F++ A G Sbjct: 124 LTEPGAGSDAGGVSTRAVHNKEEGTYTLNGTKMFITNGGLAEIFLVFANTRKTGGIRGLT 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 F+VP+ +P G + +NK+G R + T EL + + +G E Sbjct: 184 AFIVPK----DTP-GFSVGKKENKMGIRPSNTTELVLQDVVIPESYRVGREG------EG 232 Query: 312 MKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 +I + LDSA V + V +A+A + YA+ R G + +++ +AD+A+ Sbjct: 233 FRIAMNTLDSARPFVGAVSVGIAQAALDCAVKYAKERRQFGQPIASFQMVQGMLADMAMK 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A + + D+ S+EAA A K + A V +A++ +GG GY Sbjct: 293 VETARLMVQKACWMRDQGMEFSKEAAMA-------KCYAADTAMQVTTDAVQVMGGYGYT 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 +E + + R++ I G+ L + N L Sbjct: 346 KEYPVEKMMRDAKIMQIYEGTNQIQRLVIANKL 378 >gi|262281091|ref|ZP_06058873.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter calcoaceticus RUH2202] gi|262257322|gb|EEY76058.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter calcoaceticus RUH2202] Length = 593 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 160/405 (39%), Gaps = 55/405 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 SV + ++ + + + PKI+S E+ T + LTE GTD+ I Sbjct: 131 SVGAGMALSSYASQEQKETYLPKIYSGEWSGT-------------MCLTEPHAGTDLGII 177 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL- 262 ++ + DG Y ++G K F++ +D ++LA+ + F+VP+ Sbjct: 178 KTKAEPNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYFV 237 Query: 263 -EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 EDGS N + +++K+G +++AT + F G+L+G N + M L Sbjct: 238 NEDGSLGERNLVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERL 297 Query: 319 DSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILIDQPVMKRAIADIALD 365 I + + A YA R + IL+ V +R + ++ + Sbjct: 298 SMGIQGLGASEFAYQNAAQYATDRLQGRSALGVQSPNKPADSILVHGDV-RRMLLNVRAN 356 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECI 419 A+ A + + D K ++ A + ++ PI K + A +A Sbjct: 357 NEASRAFAVYVGQQLDITKFSTDAEAVKKANNRVALLTPIAKAYLTDTAFQATLDAQMVF 416 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGS 478 GG GYI E + + R+ I G+ D++ K F + T +D + Sbjct: 417 GGHGYIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFAN 476 Query: 479 SGKKVITILRD-SISLCKEDKGLARFLTEKIA----LASSAAALY 518 + ++D ++ E + + +F+ E+ A +SAA Y Sbjct: 477 DLDTDLNFIKDATLDAVTEIEAITQFIIEQAAENVDFPNSAAVDY 521 >gi|259419059|ref|ZP_05742976.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member 8) [Silicibacter sp. TrichCH4B] gi|259345281|gb|EEW57135.1| isobutyryl-coa dehydrogenase ( acyl-coa dehydrogenase family member 8) [Silicibacter sp. TrichCH4B] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D A++ ++ + ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAASLKTRAARDNEG-YVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +EDG+P GL + L++K+G +S T +++F + G L+G+ G MK L Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGE--EGHGFKYAMKGL 237 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L+ A S+ + L+ + Y R G + ++ +AD+ +++ AA Sbjct: 238 DGGRLNIAACSLGAAQAGLSATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFL 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D+ + + + + K + + V+ + ++ GG GY+ + I + Sbjct: 298 RQAAWKLDQGEPDASK------FCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEKL 351 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 352 VRDLRVHQILEGTNEIM 368 >gi|197118510|ref|YP_002138937.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] gi|197087870|gb|ACH39141.1| very-long-chain acyl-CoA dehydrogenase [Geobacter bemidjiensis Bem] Length = 592 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 48/360 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + +DG Y L+G K F ++ ++ + + A+V+ FLV Sbjct: 147 LTEPDSGSDALGAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEHFTAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R E G+ + K+G + ++T ++ N +LG+ + G +L Sbjct: 207 ERGFE-----GVSVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGE--IGKGHKIAFNVL 259 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A+ + + +LA+ I YA R G + +K IAD+ + AA + Sbjct: 260 NVGRFKLGAAVTGAA--KGALADGIKYANLRKQFGRTIGSFGAIKEKIADMTSAVFAAES 317 Query: 372 LSFRLA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +RLA N +D + EE A + + K +C ++ V E + Sbjct: 318 MVYRLAGLIDQRLATIPRDTPNYYDVYQRAIEEYA---MECAVAKVFCSEVLAFVADEVV 374 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQ 474 + GG G+++E R+YR+ N I G+ ++ LL GT L + L+Q Sbjct: 375 QIHGGYGFVQEYPAERYYRDERINRIFEGTN-----EINRLLVPGTLLARAMKGEIPLQQ 429 Query: 475 DLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 + + + ++T L DS+ E LA + LA SAA ++A + + +V L Sbjct: 430 EALKAFESLMTPSFEELDDSVPFAAEKALLAGLKQAFLVLAGSAAQKFQAAVKEEQEVLL 489 >gi|126652586|ref|ZP_01724750.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905] gi|126590577|gb|EAZ84694.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus sp. B14905] Length = 378 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 27/282 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + ++ + Y L+G K F+++ ++D +I+ A Sbjct: 113 PMAEGKHIGAYGLTEPGSGSDAGGMKTYAKRDGND-YILNGSKIFITNGGVADTYIVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + ++E G G + + K+G RS+ T E+ F N + N+ Sbjct: 172 TDPEAKNGTSAFIVEAGY-EGFSVGKKEKKLGIRSSPTTEIIFDNC---RVPKENLLGAE 227 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD ++ V +A+ A+ YA+ R G + + +AD+ Sbjct: 228 GEGFKIAMTTLDGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGVSFKLADM 287 Query: 363 ALDIAAATALSFRLA----NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 A I A+ L+++ A N+ K+ +A A++MA T A +V EA++ Sbjct: 288 ATQIEASRLLTYQAAWLESNNLPYGKA----SAMAKLMAGDT-------AMSVTTEAVQV 336 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY ++ + R R++ I G+ L + +L K Sbjct: 337 FGGYGYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTK 378 >gi|325523056|gb|EGD01469.1| acyl-CoA dehydrogenase [Burkholderia sp. TJI49] Length = 383 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A++ + + D Y ++G K F++ +P + F ++A+ G Sbjct: 122 FALTEPEAGSDAASLRTTAIRDGDD-YVVNGTKRFITNAPHAGIFTLMARTNPDDKGSGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+V D G+ + + K+G + T ++ F N L+G G Sbjct: 181 ISAFIV-----DAKSPGISFGKRDKKMGQKGAHTCDVIFDNVRVPAANLIGGKE-GQGFK 234 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + ++ + V++AE A+ YA R G + D +++ +AD Sbjct: 235 TAMKVL---DKGRIHIAAVCVAVAERMLSMALAYAMERKQFGKPIADFQLVQAMLADSKA 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA + A D+ S EA+ A++ A +M V A++ GG+GY Sbjct: 292 EIYAARCMVLDAARRRDDKLPVSTEASCAKLFA-------SEMCGRVADRAVQIFGGAGY 344 Query: 425 IEERSIARHYRE 436 + E +I R YR+ Sbjct: 345 MAEYAIERFYRD 356 >gi|322488322|emb|CBZ23569.1| putative acyl-coenzyme a dehydrogenase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 416 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 23/252 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + +++ + +LA+ EG F+V Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV----STGPVEDMKILI 316 D G+ + + +G R + T + F N ++ NV G MK Sbjct: 221 ---DADTPGVTLGQKEMMLGQRCSDTRGITFENV---VVPQENVVGEAGKGFQVAMKAFD 274 Query: 317 YLDSAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + SA+ +S G+ R + EA YAR R G + + +A++A + A +++ Sbjct: 275 FTRSAVAISAVGLARRATDEATKYARERMTMGKPIAQHQGVAFMLAEMAAGVEACRLMTY 334 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R D+ + + A+ A++MA +A A++ GG+GY + + Y Sbjct: 335 RAGWETDQGRRNTYYASCAKMMAS-------DLAEKCSTNAVQIFGGNGYNAGYPVEKLY 387 Query: 435 RESPANSILLGS 446 R+ SI G+ Sbjct: 388 RDCKIFSIYEGT 399 >gi|167720971|ref|ZP_02404207.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei DM98] Length = 395 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 SP++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPVIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +L + GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|167745777|ref|ZP_02417904.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662] gi|317470509|ref|ZP_07929897.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167654808|gb|EDR98937.1| hypothetical protein ANACAC_00471 [Anaerostipes caccae DSM 14662] gi|316902024|gb|EFV23950.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD + + + + DG Y L+G K F + S +D FI+ A + G Sbjct: 124 FGLTEPGAGTDASGVKTSA--VLDGDHYILNGQKVFTTNSGFADTFIIFALTDKSAGTRG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 + + D + GL + ++G R+ + E+ + + NV G + KI + Sbjct: 182 MSAFIVDRNTPGLEVSKNIPRMGIRAASNCEVALVDV---RVPKENVIAGEGKGYKIAMS 238 Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + SV + +L EAI Y + R G + + IA++ + I AA Sbjct: 239 ALAGGRIGIGAQSVGIAQGALDEAIKYVKERKQFGKPIAKFQNTQFLIAELQVKIDAARL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +R A K++ + YA + A K + +A V A++ +GG GY E + Sbjct: 299 MVWRAA------KAKDDHENYAPLAAS-CKLFASDVAVEVTRAAVQLLGGYGYSREYPVE 351 Query: 432 RHYRESPANSILLGSGNAMVLDV 454 R YR++ I G+ AM + V Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374 >gi|21717403|dbj|BAC02934.1| acyl-CoA dehydrogenase A [Acinetobacter sp. M-1] Length = 622 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 102/497 (20%), Positives = 195/497 (39%), Gaps = 68/497 (13%) Query: 71 QELARMANYNTPQLHAYG-PGGERWDKVE-FHPAWHALLRRSIHDGLHCSI-----WDRS 123 +E+A+ A T L+ G G RW+ E F PA R DG + W Sbjct: 44 EEMAKFAQNVTHPLNRTGDEEGARWENGEVFTPAGFKEAFRQYADGGWIGLGADEEWGGQ 103 Query: 124 FEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSR 181 P + + ++ ++ P ++ + +AL + + + + PKI+S Sbjct: 104 AMPKM------LTVLSDEMLFATNPSFMLYPLLSVGAGMALNSYASQEQKETYLPKIYSG 157 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 E+ T + LTE GTD+ I ++ ++ DG Y ++G K F++ +D Sbjct: 158 EWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKIFITGGDND 204 Query: 242 -----AFIMLAQVEGR------VGCFLVPRLL--ED---GSPNGLCYQRLKNKIGNRSNA 285 ++LA+ + F+VP+ L ED G N + +++K+G +++A Sbjct: 205 LAENIIHLVLAKTPDAPAGSRGISLFIVPKFLLNEDRSLGERNPVGPGSIEHKMGIKASA 264 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RR 341 T + G+L+G N + M L I + + A YA + Sbjct: 265 TCVMNSDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQYATDRLQG 324 Query: 342 RHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 R +G ++P ++R + ++ + A+ A + + D K ++ A Sbjct: 325 RSAAGVQSPNKPADSILVHGDVRRMLLNVRANNEASRAFAVYVGQQLDITKFSTDAEAVK 384 Query: 394 R------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 + ++ PI K + A +A GG GYI E + + R+ I G+ Sbjct: 385 QANNRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCIRDLRIAQIYEGTN 444 Query: 448 NAMVLDVLNLLE-KGTNLFEQLFSTLEQDLGSSGKKVITILRD-SISLCKEDKGLARFLT 505 D++ K F + T +D + + ++D ++ E + + +F+ Sbjct: 445 GVQSQDLIGRKTIKCGGAFIAEYITEIRDFANDLDTDLNFIKDATLDAATEIEAITQFII 504 Query: 506 EKIA----LASSAAALY 518 E+ A +SAA Y Sbjct: 505 EQAAENVDFPNSAAVDY 521 >gi|317472841|ref|ZP_07932151.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316899683|gb|EFV21687.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 383 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 30/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252 GLTE GTD A Q + + DG + L+G K F+++ +D +I++A + GR Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIIEKRGR 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + +++ G+P G + + K+G R ++T EL F + LLG G Sbjct: 181 KLKEISAFIVDKGTP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKENLLGKQGKGFGIA 239 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + ++ + LAE I Y + R G + + +AD+A Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALEATIEYVKERKQFGRTIGQFQNTQFQLADMAT 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L ++ A + K S EAA A++ + ++A V +A++ GG GY Sbjct: 295 KVEAAKLLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369 >gi|313803279|gb|EFS44475.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL110PA2] gi|313839189|gb|EFS76903.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL086PA1] gi|314964053|gb|EFT08153.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA1] gi|327334391|gb|EGE76102.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL097PA1] Length = 382 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FILNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTCIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|313672317|ref|YP_004050428.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939073|gb|ADR18265.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio nitroreducens DSM 19672] Length = 588 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/354 (24%), Positives = 146/354 (41%), Gaps = 36/354 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + DG Y L+G K W ++ +D F + A+V+ + FL+ Sbjct: 143 LTEPGSGSDALGAKTSAVLSDDGKYYILNGTKQWITNAGFADIFTVFAKVDKQHFTAFLI 202 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R +P GL + + K+G + ++T ++ N +LG++ ++ + Sbjct: 203 ER----NTP-GLSFGAEEKKMGIKGSSTRQVILDNVKVPVENVLGEVGKGHKIAFNVLNV 257 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A + +LAE I YA R ++ ++ I+D+ A+ +L +R Sbjct: 258 GRFKLAAAVTGAAKYALAEGIKYANVRKQFDRLISSFGAIQEKISDMTAYTYASESLIYR 317 Query: 376 LANSFDEAKSR-------------SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 LA D A ++ E YA I I+K +C + V+ E ++ GG Sbjct: 318 LAGLLDNALNKIDPSLPNYYEIYQKEIEEYA-IECSISKVFCSDVLALVVDETLQIFGGY 376 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQDLGSSG 480 G+ +E R YR+ N I G+ ++ LL G L + L Q+ + Sbjct: 377 GFSQEYPAERFYRDERINRIFEGTN-----EINRLLIPGMMLRRAMKGEIPLTQEAMKAV 431 Query: 481 KKVITILRDSIS----LCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 +++T D I KE L T + LA SA Y +N+ +V L Sbjct: 432 NQLMTPSFDEIDESTPYAKEKYTLNNLKTIYLILAGSAVQKYMNNINEQQEVLL 485 >gi|302876744|ref|YP_003845377.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] gi|307687422|ref|ZP_07629868.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] gi|302579601|gb|ADL53613.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] Length = 377 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 30/262 (11%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRV 253 AIG LTE R G+D +I + ++DG Y ++G K W ++D FI+ A+ E + Sbjct: 118 AIGAFALTEPRIGSDAKSI--EATAVADGDDYVINGKKKWITMGQIADFFILFAKCEDKP 175 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+V + G + + +G R++ EL N L+G + V Sbjct: 176 TAFIVEK-----DRVGFSKKPMSGLLGVRASMIAELTLENCRIPKENLVGRIGTGLSHVA 230 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 L LD SV+ V +A+A + YA+ R + ++++ I ++ ++ Sbjct: 231 ----LSCLDYGRYSVACGCVGVAQAALEDSLRYAKERQQFNSTINGNQLIQKMITEMVVN 286 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAP-ITKYWCCKMAPAVIAEAMECIGGSGY 424 I AA L ++ D S IM + KY+ M + ++A++ GG+G Sbjct: 287 IKAARQLYYKAGYLKDICDPDS-------IMETWVVKYFASTMLTKITSDAIQIHGGNGV 339 Query: 425 IEERSIARHYRESPANSILLGS 446 E + R++R++ N I+ G+ Sbjct: 340 SNEYRVERYFRDARVNEIIEGT 361 >gi|78224497|ref|YP_386244.1| Acyl-CoA dehydrogenase-like [Geobacter metallireducens GS-15] gi|78195752|gb|ABB33519.1| Acyl-CoA dehydrogenase-like protein [Geobacter metallireducens GS-15] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 35/270 (12%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251 ++++ L TE G+D+ A+ ++ + D Y ++G K F+++ ++D ++ A + Sbjct: 115 ESTLLTALAATEPAAGSDLLAMKTRAVRQGDK-YVINGQKCFITNGSVADVIVVYAYTDP 173 Query: 252 RVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + ++E G+P GL Y R ++K+G R + EL F N + V P E Sbjct: 174 EKGSKGISAFVVEKGTP-GLVYGRNESKMGMRGSINSELFFEN--------MEV---PAE 221 Query: 311 DM---------KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA--- 358 ++ ++ L + + + V +A+ RH + +P+ A Sbjct: 222 NIIGAEGTGFANLMQTLSTNRVFCAAQAVGIAQGALDIAVRHTQDRVQFGKPIAHLAPVQ 281 Query: 359 --IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + A+ L+ + A D+ + A + + K A V +A+ Sbjct: 282 FMVADMATAVEASRLLTRKAAELLDDGDKK------AVLYGSMAKTMASDTAMRVTTDAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + +GGSGY++E + R R++ I G+ Sbjct: 336 QVLGGSGYMKENGVERMMRDAKLTQIYTGT 365 >gi|158424457|ref|YP_001525749.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158331346|dbj|BAF88831.1| isovaleryl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 390 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 36/281 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMRTRAEKKGD-RYILNGSKMWITNGPIAETLVVYAKTDPAAGARGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGQVGRGVNV------- 242 Query: 312 MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD ++G + + +A I Y R G + +M+ IAD+ + + Sbjct: 243 --LMSGLDYERAVLAGGPIGIMQACMDVVIPYVHERKQFGQPIGTFQLMQGKIADMYVAM 300 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + A + +A + D + E+AA A ++A W EA++ +GG+GYI Sbjct: 301 NSVKAYVYAVAKACDRGLTTREDAAGAILIAAEKATWMA-------LEAIQTLGGNGYIN 353 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R R++ I G+G + + +L G LFE+ Sbjct: 354 DYPTGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEK 388 >gi|160888726|ref|ZP_02069729.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492] gi|270293508|ref|ZP_06199710.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479525|ref|ZP_07938656.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp. 4_1_36] gi|156861625|gb|EDO55056.1| hypothetical protein BACUNI_01144 [Bacteroides uniformis ATCC 8492] gi|270274975|gb|EFA20835.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316904345|gb|EFV26168.1| acyl-CoA dehydrogenase domain-containing protein [Bacteroides sp. 4_1_36] Length = 568 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 134/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATYDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ + D K+ R E+ YA++ P+ K + A Sbjct: 347 SLLYQTSRYVDIYKALDDIARERKLTPEERQEQKKYAKLADAFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|119183636|ref|XP_001242828.1| hypothetical protein CIMG_06724 [Coccidioides immitis RS] Length = 430 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + S G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETSSKGFSCARKLDKLGMRGSNTGELIFEDVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N +K+L+ L+ ++S M+ +L + Y R Sbjct: 261 PKENILGAVN------RGVKVLMEGLDLERLVLSAGPLGIMQATLDLVLPYTHTRKQFNA 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +A + A ++ A D + + E + + Sbjct: 315 PIAHNQLVQGKLADMYTKLAVSRAYTYNTARQIDNSAASPEGTQIRTQDCAGAILYAAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|327301089|ref|XP_003235237.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] gi|326462589|gb|EGD88042.1| isovaleryl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] Length = 431 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ ++ + + DG + L+G K W + Sbjct: 143 NGSPEQKERFLPGLISGEKIGALAMSEHSAGSDVVSMKTKAKAV-DGGFVLNGTKMWITN 201 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + G R +K+G R + T EL F + F Sbjct: 202 GPDADFIVVYAKTEPDAGSKGITAFVVEKDFKGFSCARKLDKLGMRGSNTGELIFEDVFV 261 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N + +++L+ L+ ++S M+ L + Y R G Sbjct: 262 PHANVLGQIN------KGVRVLMEGLDLERLVLSAGPLGIMQACLDLVLPYTHTRTQFGM 315 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D++ S+ + + Sbjct: 316 PIAHNQLIQGKLADMYTKLAASRAFTYNTARQVDQSAISSDGTQVKTQDCAGAILYAAER 375 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 376 ATECSLDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 414 >gi|319764491|ref|YP_004128428.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|330826707|ref|YP_004390010.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|317119052|gb|ADV01541.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|329312079|gb|AEB86494.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 396 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G Y L+G K W + P +D ++ A+ E +G V Sbjct: 132 LAMSEPGAGSDVISMKLKAED-KGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGV 190 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + S G + +K+G R + T EL F + +LG +N K+L Sbjct: 191 TAFLIEKSMKGFSIAQKLDKLGMRGSHTGELVFQDVEVPAENVLGQVNGGA------KVL 244 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ + + Y R G + + +++ +AD+ + A Sbjct: 245 MSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAG 304 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ +A + D E R WC + A + E ++ GG+GYI E Sbjct: 305 RSFAYTVAKNLDMLGI--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYP 362 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 363 LGRLWRDAKLYEIGAGT 379 >gi|16125599|ref|NP_420163.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15] gi|13422699|gb|AAK23331.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15] Length = 379 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 38/266 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ + K+ Y L+G K F+S +SD ++++A+ G V F Sbjct: 124 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVSAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304 +V + +E GL + + K+G + T ++ F N GF + + Sbjct: 183 VVEKGME-----GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGL 237 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G L+ A S+ G + +L A Y R+ G L D ++ +AD+A Sbjct: 238 DGG---------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMAT 288 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA + R A++ D S+ EA MA K + V +A++ GG GY Sbjct: 289 ELEAARLMVRRAAHALD---SKHPEATKLCAMA---KRFATDAGFQVANDALQLHGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 +++ + R R+ + IL G+ M Sbjct: 343 LQDYPLERLVRDLRVHQILEGTNEIM 368 >gi|307326307|ref|ZP_07605503.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306887970|gb|EFN18960.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 379 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 24/257 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---EGRVGC 255 G L+E + G+D AA+T + K DG W +D + + A+ + C Sbjct: 124 GYSLSEPQAGSDAAALTCRADKAPDGYRITGAKAWITHGGKADFYALFARTGPGSDGISC 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F P G +GL + R ++K+G + T + + LL + E ++I Sbjct: 184 FFAP-----GHTDGLTFGRPEDKMGLHAIPTTSAFWDDA---LLATDRLIGAEGEGLQIA 235 Query: 316 IY-LDSAIMSVSGMRVSL-----AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LDS + V+ L A YA R G +ID + +AD+A + +A Sbjct: 236 FSALDSGRLGVAACATGLAQAALDAATAYAHERTTFGRRIIDHQGLGFLLADMAAAVDSA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A D A+ R Y R A + K A V +A++ GG GY + Sbjct: 296 R------ATYVDAARRRDHGRPYTR-QASVAKLTATDAAMKVTTDAVQVFGGYGYTRDFP 348 Query: 430 IARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 349 VERYMREAKIMQIFEGT 365 >gi|295401420|ref|ZP_06811391.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976635|gb|EFG52242.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 594 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 131/313 (41%), Gaps = 49/313 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W ++ +D FI+ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFIVYAKVDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G P G+ + K+G +S++T L + LLG+ + G V IL Sbjct: 210 ER----GFP-GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--IGKGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368 + +V G + +L + YA +R QP+ K A +A + A Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFSLTQEKFATMASRLYA 317 Query: 369 ATALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +R FDE K ++ A I + K++ + ++ E + Sbjct: 318 TESSVYRTVGLFDERMGLLDEEKAKDGKEIAKSIAEYAIECSLNKFFATETLDYIVDEGV 377 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464 + GG G+++E I R YR+S N I G+ L V L LL+K L Sbjct: 378 QIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQL 437 Query: 465 FEQLFSTLEQDLG 477 E+L +++G Sbjct: 438 QEELIMLAPEEVG 450 >gi|99080944|ref|YP_613098.1| acyl-CoA dehydrogenase-like [Ruegeria sp. TM1040] gi|99037224|gb|ABF63836.1| acyl-CoA dehydrogenase-like protein [Ruegeria sp. TM1040] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + ++G Y L+G K F+S SDA++ + + G G + Sbjct: 124 LTEPGSGSDAAALKTRASRDNEG-YVLNGTKAFISGGGYSDAYVCMVRT-GEDGPKGIST 181 Query: 261 L-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L +EDG+P GL + L++K+G +S T +++F + G L+G G MK L Sbjct: 182 LYVEDGTP-GLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVG--QEGDGFKYAMKGLD 238 Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ A S+ + L + Y R G + ++ +AD+ +++ AA Sbjct: 239 GGRLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLR 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D+ A + K + + V+ + ++ GG GY+ + I + Sbjct: 299 QAAWKLDQGSPD------ATKFCAMAKKFVTETGSNVVDQCLQLHGGYGYLADYGIEKLV 352 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 RDLRVHQILEGTNEIM 368 >gi|221638920|ref|YP_002525182.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131] gi|221159701|gb|ACM00681.1| Isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides KD131] Length = 385 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/307 (21%), Positives = 138/307 (44%), Gaps = 41/307 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 101 NQIRLNGSPEQKASYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMRLKA 146 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K +G Y L+G K W + P +D ++ A+ + G + L + S G + Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328 K+G R + T EL F N F +LG + +++L+ LD + +SG M Sbjct: 206 KVGMRGSNTGELIFDNCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 L E + Y + R G + + +M+ +AD+ + + A A + A + D + Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYEAARACDAGRVTRA 319 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +AA + + + A +A++ +GG+G++ + ++R +R+ A + +G+G Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRD--AKLMEIGAGT 370 Query: 449 AMVLDVL 455 + + +L Sbjct: 371 SEIRRML 377 >gi|157374597|ref|YP_001473197.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316971|gb|ABV36069.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis HAW-EB3] Length = 389 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/308 (21%), Positives = 138/308 (44%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P T IG L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLITGEHIGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + + Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F + + + N+ G +K+L+ LD + Sbjct: 195 RDSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251 Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +SG M + I Y R G + +++ +AD+ + AA + + +A Sbjct: 252 VLSGGPLGIMTACMDIVIPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R++ Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364 Query: 439 ANSILLGS 446 I G+ Sbjct: 365 LYEIGAGT 372 >gi|317498919|ref|ZP_07957203.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893844|gb|EFV16042.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 20/263 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + + K+ Y L+G K F + S +D FI+ A + G + Sbjct: 124 FGLTEPGAGTDASGVKTTA-KLDGDHYVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGM 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311 + D GL + ++G R+ + E+ N G ++ G + Sbjct: 183 SAFIVDRDSEGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALAG 242 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I I SV + +L EAI Y + R G + + IA + I AA Sbjct: 243 GRIGI----GAQSVGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +R A + D+ ++ + AA ++ A +A V A++ +GG GY E + Sbjct: 299 MVWRAAKAKDDHENFAPLAAQCKLFA-------SDVAVEVTRGAVQMLGGYGYSREYPVE 351 Query: 432 RHYRESPANSILLGSGNAMVLDV 454 R YR++ I G+ AM + V Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374 >gi|319653302|ref|ZP_08007404.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp. 2_A_57_CT2] gi|317395223|gb|EFV75959.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp. 2_A_57_CT2] Length = 402 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + GLTE G+D++A+ S + D Y L+G K W +D F++ A+ Sbjct: 114 PQAQGKQVGAFGLTEPNAGSDVSAMNSTAIRNGDS-YILNGSKSWISLCDAADNFLIFAK 172 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 E +G + + + G+ + +K K+G R+ T E+ L D+ V P Sbjct: 173 TEHDIGHKGISAFIVERKFPGVETKAIKGKLGIRAGNTGEV--------FLSDVRV---P 221 Query: 309 V--------EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354 V E KI + LD+ +V+ V L EA + Y R G + + Sbjct: 222 VSNRLGEEGEGFKIAMSALDNGRFTVAAGAVGLIEASLEASLKYCHERKTFGKEIGRHQL 281 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +++ IA ++ ++ + L F+ ++ K ++E + A+ +A C A + Sbjct: 282 VQQMIAKMSANLEISRLLVFKSGWLKNQGKRNTKETSLAKWIA-------CNAAFEAAND 334 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ G GY +E + R R S A I G+ Sbjct: 335 AVQIHGAYGYSDEYPVERFLRNSKAPVIYEGT 366 >gi|302526131|ref|ZP_07278473.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] gi|302435026|gb|EFL06842.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] Length = 376 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 25/271 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K TE GG+D+AA+ + + D + ++G K F+S + +D I+ A Sbjct: 111 PIVKEDKRCCYAFTEPSGGSDVAAMRTTAARKGDD-WIINGTKTFISHAERADFVILFAT 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + +G V L D G R +G+ EL F + LGD+ Sbjct: 170 TDRTLGARGVTCFLVDIDTPGFTLSRPIPTMGDDWEP-FELAFDHCVVPDANRLGDVGGG 228 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 D L + ++ ++ +AE A+ +A++R G L + ++ +A Sbjct: 229 WALANDQ-----LTHGRLKIAAYQLGIAERCLDIAVEWAKQRVTWGKPLASRQAVQWMLA 283 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D A ++ AA L +R A DE + EA A++ A +MA V ++ +G Sbjct: 284 DSATELEAARWLVYRAAWLADEGRPVKTEAFKAKLCA-------TEMAQRVTDRCLQILG 336 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451 G GY +E I YR+ I G G A + Sbjct: 337 GLGYSKELPIQSFYRQVRVWRI--GHGTAEI 365 >gi|229494616|ref|ZP_04388379.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus erythropolis SK121] gi|229318978|gb|EEN84836.1| acyl-CoA dehydrogenase, middle domain protein [Rhodococcus erythropolis SK121] Length = 611 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 70/318 (22%), Positives = 137/318 (43%), Gaps = 56/318 (17%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA I R + T + LTE G+D+ A ++ K DG + + G Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192 Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRL------LEDGSPNGLCY 272 K F++S SD ++LA+ EG + F VP+ E G NG+ Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +++K+G + +AT E+ F G+L+G+++ + D+ + +++ + Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312 Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375 A+ YA++R V G L P ++R++A A+ Sbjct: 313 STGYLNALDYAKQR-VQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLY 371 Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A DE ++ ++ A+ ++ PI K + A + ++++ +GGSG++++ Sbjct: 372 TAAHQDEVVAQLVSGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDY 431 Query: 429 SIARHYRESPANSILLGS 446 I ++ R+S +S+ G+ Sbjct: 432 PIEQYIRDSKIDSLYEGT 449 >gi|226304619|ref|YP_002764577.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183734|dbj|BAH31838.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 611 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 70/318 (22%), Positives = 137/318 (43%), Gaps = 56/318 (17%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA I R + T + LTE G+D+ A ++ K DG + + G Sbjct: 146 QKKWAATIVERGWGAT-------------MVLTEPDAGSDVGAGRTKAIKQDDGSWHIEG 192 Query: 231 HKWFLSSPMSDAF------IMLAQVEGR------VGCFLVPRL------LEDGSPNGLCY 272 K F++S SD ++LA+ EG + F VP+ E G NG+ Sbjct: 193 VKRFITSADSDDLFENIFHLVLARPEGAGPGTKGLSLFFVPKTHFNFETEEFGERNGVFV 252 Query: 273 QRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +++K+G + +AT E+ F G+L+G+++ + D+ + +++ + Sbjct: 253 TNVEHKMGLKVSATCEVTFGGHGIPAQGWLVGEVHNGIAQMFDVIEHARMMVGTKAIATL 312 Query: 329 RVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFR 375 A+ YA++R V G L P ++R++A A+ Sbjct: 313 STGYLNALDYAKQR-VQGADLTQMTNKAAPRVTITHHPDVRRSLAMQKAYAEGLRAVYLY 371 Query: 376 LANSFDEAKSR-----SEEAAY--ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A DE ++ ++ A+ ++ PI K + A + ++++ +GGSG++++ Sbjct: 372 TAAHQDEVVAQLVSGADKDTAFRVNDLLLPIVKGVGSERAYQYLTDSLQTLGGSGFLQDY 431 Query: 429 SIARHYRESPANSILLGS 446 I ++ R+S +S+ G+ Sbjct: 432 PIEQYIRDSKIDSLYEGT 449 >gi|126632707|emb|CAM56319.1| novel protein (zgc:55656) [Danio rerio] Length = 442 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 29/275 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ MSD I++ Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGVKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 A E + + L D G R K+G ++ T EL F + LLG Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288 Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +N ++ P E + I A+M ++ E+ +Y +R G + D V+ Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A++ +I A E K S A+ A KYW + V + Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IA+ + ++ I G+ M Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430 >gi|228996565|ref|ZP_04156204.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17] gi|229004215|ref|ZP_04162016.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4] gi|228757076|gb|EEM06320.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock1-4] gi|228763197|gb|EEM12105.1| Acyl-CoA dehydrogenase domain protein [Bacillus mycoides Rock3-17] Length = 405 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+ A+ + K D Y L+G K W ++D F++ A+ + Sbjct: 123 FGLTEPNAGSDVVAMQTTAVKQGD-YYVLNGSKTWISLCDVADHFLIFAKTNSELKHRGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 CF+V R G+ + +K K+G R+ T E+ E LLG+ E Sbjct: 182 SCFIVERTFP-----GVSTKAIKGKLGIRAGNTGEVFLDEVKVPAENLLGEEG------E 230 Query: 311 DMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD+ +V+ ++ SL ++ Y R G + ++++ IA ++ Sbjct: 231 GFKIAMASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSA 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ + L ++ +E K + E + A+ +A C A +A++ G GY Sbjct: 291 NLEISRLLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 E + R+ R + A I G+ Sbjct: 344 SNEFPVERYLRNAKAPVIYEGT 365 >gi|184157703|ref|YP_001846042.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|332876388|ref|ZP_08444157.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|183209297|gb|ACC56695.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|322508010|gb|ADX03464.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323517598|gb|ADX91979.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332735398|gb|EGJ66456.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 383 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V D G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV L ++++YA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A++ A +M V ++ GG+GYI E + Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|119471968|ref|ZP_01614253.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7] gi|119445226|gb|EAW26517.1| Isovaleryl-CoA dehydrogenase [Alteromonadales bacterium TW-7] Length = 391 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 123/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDADTLVIYAKTDLNAGAKGI 190 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + + G + +K+G R + T EL F N +LG+LN E +K+L Sbjct: 191 TAFIVEKTFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 + LD + ++ + + +A + Y R D P+ ++ +AD+ Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA + + +A + D ++ ++AA A + + ++A + +A++ +GG+GY Sbjct: 300 QMNAARSYVYTVAKACDSGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374 >gi|15597748|ref|NP_251242.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107102000|ref|ZP_01365918.1| hypothetical protein PaerPA_01003047 [Pseudomonas aeruginosa PACS2] gi|218891469|ref|YP_002440336.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254235543|ref|ZP_04928866.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719] gi|254240984|ref|ZP_04934306.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192] gi|313107456|ref|ZP_07793644.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|9948611|gb|AAG05940.1|AE004683_4 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126167474|gb|EAZ52985.1| hypothetical protein PACG_01468 [Pseudomonas aeruginosa C3719] gi|126194362|gb|EAZ58425.1| hypothetical protein PA2G_01664 [Pseudomonas aeruginosa 2192] gi|218771695|emb|CAW27469.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|310880146|gb|EFQ38740.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 375 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 30/282 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + S+ LTE + G+D + + ++ ++ D Y L+G K F++S +++ V Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G+ G F+VP G R+++K+G ++ T +L F++ LG Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A +V R + A YA R G +I+ + Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A S E A + K + +MA V + A+ Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + +GG GY+++ + R YR+ I G+ + L + L Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375 >gi|302342012|ref|YP_003806541.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301638625|gb|ADK83947.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 378 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 40/320 (12%) Query: 147 EAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREY-DPTNKAPMQKTSVAIGLGLTE 204 E GH+ V++A V M TP + + F EY T P + + +TE Sbjct: 73 ELGHIAGMGVSTAICVQTHMATPAIAE------FGSEYLKETYLRPAIAGEMVSAIAVTE 126 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR-----VGCFLV 258 G+D+AAI ++ ++ D Y ++G K ++++ + +D +LA+ G F+V Sbjct: 127 PDAGSDVAAIKTRARRDGDH-YLINGSKLYITNGVQADFLTLLARTSDEPGHHSFGLFVV 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 P L G + +K+G RS+ T L F + L+G G + MK Sbjct: 186 PTNLP-----GFSVGKKLDKVGLRSSDTALLHFDDVPVPAQNLIG--QEGEGFIMQMKQF 238 Query: 316 IY-----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L SA+ M + + + R+R V G L + V++ + D +I A Sbjct: 239 QHERFCTLPSAVTMCEDM---IKMTMEHLRQRVVFGKPLATRQVLRHRMVDWLTEIEALR 295 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++ + + + E + ++MA ++ V ++ GG G+I E I Sbjct: 296 HLTYHIVRMKQAGQDATREVSMGKLMA-------GRLVRNVADGCVQMHGGMGFINETLI 348 Query: 431 ARHYRESPANSILLGSGNAM 450 AR +R+S SI G+ M Sbjct: 349 ARCFRDSRVLSIGAGADEVM 368 >gi|296389023|ref|ZP_06878498.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 375 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 30/282 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + S+ LTE + G+D + + ++ ++ D Y L+G K F++S +++ V Sbjct: 111 PLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDH-YVLNGTKQFITSGSHAGMVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 G+ G F+VP G R+++K+G ++ T +L F++ LG Sbjct: 170 TDPDAGKRGISAFIVPT-----DTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPATLRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A +V R + A YA R G +I+ + Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A S E A + K + +MA V + A+ Sbjct: 281 FRLADMATRIAVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + +GG GY+++ + R YR+ I G+ + L + L Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375 >gi|134099668|ref|YP_001105329.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133912291|emb|CAM02404.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 382 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 16/270 (5%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 AIG L +TE GG+D+A + + ++ D + ++G K F++S F+ A G G Sbjct: 121 AIGALAVTEPGGGSDVAGLRTTAERDGDHL-VVNGAKTFITSGCRADFVTTAVRTGAPGA 179 Query: 256 FLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 + L+ E G+P G R +K+G + + T EL F + L+G + + Sbjct: 180 HGISLLVVERGTP-GFEVSRRLDKMGWQCSDTAELSFVDCRVPAANLVGAQDSGFVQIAQ 238 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + A+ + +G + +L + + R R G LI + +++ + ++A + A + Sbjct: 239 HFLTERIMLAVQAYAGAQRALDLTVSWCRMRETFGRPLISRQLVRHTLVEMARKVDVARS 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +A E +A+ A W V+ +A++ GG+GY+ E + Sbjct: 299 YVHDVARRHLAGDDVVAEVCFAKNTAVEAGTW-------VVDQAVQLHGGAGYMRESEVE 351 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R YR+ + +G G + VL L KG Sbjct: 352 RQYRD--MRILGIGGGTSEVLAELAAKRKG 379 >gi|304317108|ref|YP_003852253.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778610|gb|ADL69169.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA 247 P+ K GLTE GTD A Q + DG Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFGLTEPNAGTDAAG--QQTTAVLDGDHYVLNGSKIFITNGGKADIYIIFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + + + G +++ K+G R+++T EL F + ++ N+ Sbjct: 171 MTDKSKGTRGISAFIVEKDFPGFSIGKIEEKMGIRASSTAELVFEDC---IVPKENLLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 E KI + LD + ++ + +A+A I YA+ R G + ++ IAD Sbjct: 228 EGEGFKIAMATLDGGRIGIAAQALGIAQAALDEEIKYAKERQQFGRPIGKFQGIQWYIAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I A+ L + A + EAA A++ A T A V + ++ GG Sbjct: 288 MATRINASRWLVYNAAWRKQVGLPYTMEAAMAKLYASET-------AMFVTTKTVQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G+ ++ + R R++ I G+ Sbjct: 341 YGFTKDYPVERFMRDAKITEIYEGT 365 >gi|226362136|ref|YP_002779914.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240621|dbj|BAH50969.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 389 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 24/252 (9%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250 V LTE G++ A +T++ + DG + ++G K F++ +P++D F++ A+ Sbjct: 121 VVASFALTEPEAGSNPAGLTTRA-VLKDGKWTINGTKRFITNAPLADLFVVFARTRPADE 179 Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVST 306 + FLVP G+ K+G T E+ F + G L + Sbjct: 180 TGTGIAVFLVP-----ADTAGVVVGPKDKKMGQEGAWTAEVAFDDVTVPGSALVGGSEEA 234 Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M L + A ++V + +L E++ +A G + D +++ +AD + Sbjct: 235 GYRAAMTSLARGRVHIAALAVGSAQRALDESVAFAAVTKQGGTPIGDFQLVQAMLADQQV 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++A AL A + + R RI + K +C +MA V A++ GG+GY Sbjct: 295 GVSAGRALVRDAAQKYVSGEDR-------RIAPSVAKLYCTEMAGKVADLAVQVHGGTGY 347 Query: 425 IEERSIARHYRE 436 + + + R YRE Sbjct: 348 MRDVPVERIYRE 359 >gi|163751337|ref|ZP_02158563.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] gi|161328746|gb|EDP99893.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] Length = 385 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G+ G + + Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGTKMFISGAGATELLVVMCRTGQDGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + G+ Y + ++K+G + T E+ F+ LLG+ G MK L Sbjct: 183 VVPADAKGVTYGKAEDKMGWNAQPTREITFNQVRVPVTNLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ AI SV + +L A Y + R G + ++ +AD+A ++ AA L RL Sbjct: 241 RINIAICSVGTAQAALERATQYMQERQQFGKPIATFQALQFKLADMATELVAARQL-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E +AY + K + + V A++ GG GY+ E + R+ R+ Sbjct: 300 A-AFKLDCGDPEASAY----CAMAKRFATDVGFQVCDAALQLHGGYGYLREYPLERYVRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|84502592|ref|ZP_01000711.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84388987|gb|EAQ01785.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 387 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 127/266 (47%), Gaps = 26/266 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G +K+G R + T EL F + F +LG+ + +++L Sbjct: 187 TAFIIEKDMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M L E + Y R G + + +M+ IAD+ + +A Sbjct: 241 MSGLDYERVVLSGIGTGIMAACLDEIMPYMVERKQFGQSIGNFQLMQGKIADMYTKMNSA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ +A + D + ++AA + + + A V +A++ +GG+GY+ + Sbjct: 301 RAYTYEVAKACDRGEVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGYLNDNP 353 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + R +R+ A + +G+G + + +L Sbjct: 354 VGRIFRD--AKLMEIGAGTSEIRRML 377 >gi|221234349|ref|YP_002516785.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|220963521|gb|ACL94877.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter crescentus NA1000] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 38/266 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ + K+ Y L+G K F+S +SD ++++A+ G V F Sbjct: 126 LTEPGSGSDAAAMRTTA-KLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVSAF 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304 +V + +E GL + + K+G + T ++ F N GF + + Sbjct: 185 VVEKGME-----GLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGL 239 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G L+ A S+ G + +L A Y R+ G L D ++ +AD+A Sbjct: 240 DGG---------RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMAT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA + R A++ D S+ EA + + K + V +A++ GG GY Sbjct: 291 ELEAARLMVRRAAHALD---SKHPEATK---LCAMAKRFATDAGFQVANDALQLHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 +++ + R R+ + IL G+ M Sbjct: 345 LQDYPLERLVRDLRVHQILEGTNEIM 370 >gi|167768658|ref|ZP_02440711.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1] gi|167710182|gb|EDS20761.1| hypothetical protein CLOSS21_03217 [Clostridium sp. SS2/1] gi|291559739|emb|CBL38539.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2] Length = 380 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 20/263 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + + K+ Y L+G K F + S +D FI+ A + G + Sbjct: 124 FGLTEPGAGTDASGVKTTA-KLDGDHYVLNGQKVFTTNSGFADTFIIFAYTDKSAGTRGM 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311 + D GL + ++G R+ + E+ N G ++ G + Sbjct: 183 SAFIVDRDSEGLTVSKDIPRMGIRAASNAEVALVDVKVPKENLIGREGMGYKIAMGALTG 242 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I I SV + +L EAI Y + R G + + IA + I AA Sbjct: 243 GRIGI----GAQSVGIAQGALNEAIKYVKERKQFGKPIAKFQNTQFLIAALQTKIDAARL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +R A + D+ ++ + AA ++ A +A V A++ +GG GY E + Sbjct: 299 MVWRAAKAKDDHENFAPLAAQCKLFA-------SDVAVEVTRGAVQMLGGYGYSREYPVE 351 Query: 432 RHYRESPANSILLGSGNAMVLDV 454 R YR++ I G+ AM + V Sbjct: 352 RMYRDAKITEIYEGTSEAMKMIV 374 >gi|103488529|ref|YP_618090.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256] gi|98978606|gb|ABF54757.1| Acyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 34/268 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + ++ D Y L+G K F+S + +D ++ + + + Sbjct: 126 LTEPGSGSDAAALKTTAKRDGDH-YVLNGTKQFISGAGYNDIYVCMVRTGEEKAKGISCL 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVST 306 ++E +P GL + + K+G ++ T ++ F + F F + L+ Sbjct: 185 VVEKDTP-GLSFGAPEKKLGWNASPTAQVIFEDCRVPVENRVGAEGDGFRFAMAGLDGGR 243 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 L+ S+ G + L EAI Y R R G + D + +AD+A D+ Sbjct: 244 -----------LNIGACSLGGAQRCLDEAITYTRDRQQFGQPVADFQNTQFMLADMATDL 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA AL + A AK + +R A + K ++ +A++ GG GY++ Sbjct: 293 EAARALLYMAA-----AKVTANAPDKSRFSA-MAKRLATDNGSRIVNDALQLFGGYGYLK 346 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDV 454 + I R +R+ +SIL G+ M + V Sbjct: 347 DYPIERFWRDLRVHSILEGTNQVMRMIV 374 >gi|83311123|ref|YP_421387.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82945964|dbj|BAE50828.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 554 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 31/300 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM----------LAQ 248 LTE + G+D+ + + +DG + +SG K F+S ++ IM A Sbjct: 158 LTEAQAGSDLGLVRTMASPQADGSWSISGGKIFISGGDQNLTGGQIMHLVLARTPDAPAG 217 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 V+G + FL P LEDGS N + RL+ K+G ++ T ++ F ++G Sbjct: 218 VKG-LSLFLCPSHLEDGSRNAISVVRLEEKMGMHASPTCQVAFDGARAEIIGAPGEGLAR 276 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GG---ILIDQPVMKRAIA 360 + M LD A+ V V+L ++ YA R GG I V + +A Sbjct: 277 MFTMMNAERLDVAVQGVGLAEVALQRSLAYANERKQGRAGKDGGPDFIAKHGDVRRMLLA 336 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +AL + A+ R + + A +M P+ K + + A A++ G Sbjct: 337 QMALAM-GCRAMVMRTLVDLE----LGDRPALMELMTPVAKAFATEAAMEAADHAIQVHG 391 Query: 421 GSGYIEERSIARHYRESPANSILLGSGN---AMVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 G G++ E + + R+ I G+ A V + L+ G L E + +E+ +G Sbjct: 392 GYGFLREYRVEQILRDGRITRIYEGTNGIQAATVAGRVIRLDNGRALTE-FKAEVEESMG 450 >gi|329937763|ref|ZP_08287282.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] gi|329303162|gb|EGG47050.1| putative acyl-CoA dehydrogenase [Streptomyces griseoaurantiacus M045] Length = 379 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---VG 254 G L+E G+D AA+T + + +G Y ++G K W +D + + A+ V Sbjct: 124 GYSLSEPGAGSDAAALTCKAEPTPEG-YRITGTKAWITHGGKADFYALFARTAPGPHGVS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFL P G+ GL + + K+G + T + G LL + + + I Sbjct: 183 CFLAP-----GAVEGLSFGLPERKMGLHAVPTAAAHWD---GALLEKDRLIGAEGQGLAI 234 Query: 315 LI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LD + ++ LA+A + YA R G L+D + +AD+ + + Sbjct: 235 AFSALDCGRLGIAACATGLAQAALDVAVDYANERTTFGRRLVDHQGLGFLLADMTAAVDS 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A A D + S +A+ A+++A A V +A++ +GG GY + Sbjct: 295 ARATYLDAARRRDRGHAFSRQASVAKLVA-------TDAAMKVTTDAVQVLGGYGYTRDF 347 Query: 429 SIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 348 PVERYMREAKITQIFEGT 365 >gi|329908070|ref|ZP_08274824.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327546771|gb|EGF31706.1| Glutaryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 394 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K++ G Y L+G K W +SP++D F++ A Sbjct: 126 PKLATGEFIGCFGLTEPDHGSDPGSMVTRARKVAGG-YALTGSKMWISNSPIADVFVIWA 184 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + EG + F +LE G GL + K G R++ T E+ N F D+ Sbjct: 185 KDDEGAIRGF----ILEKGMA-GLSAPAIHGKFGLRASVTGEIVMDNVFCPEENAFPDVR 239 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRA 358 GP L++A +S + AE+ H AR+ R G L ++++ Sbjct: 240 GLKGP------FTCLNAARYGISWGALGAAESCWHIARQYVLDRKQFGKPLAANQLIQKK 293 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ +I A RL DE + E + + K C + + A + Sbjct: 294 LADMQTEITMALQGVLRLGRMKDEGTAAVE-------ITSMMKRNSCGKSLDIARVARDM 346 Query: 419 IGGSGYIEERSIARH 433 +GG+G +E + RH Sbjct: 347 LGGNGISDEYGVIRH 361 >gi|288962555|ref|YP_003452850.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510] gi|288914821|dbj|BAI76306.1| isobutyryl-CoA dehydrogenase [Azospirillum sp. B510] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 40/271 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCF 256 LTE G+D AA+ ++ + DG Y L+G K F+S + SD ++++A+ G + F Sbjct: 124 LTEANAGSDAAALRTRAVRDGDG-YILNGAKQFISGAGSSDLYLVMARTGEDGPGGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNT----------FGFLLGDLNV 304 LVP+ GL + ++K+G + T V LE + GF + Sbjct: 183 LVPK-----DTAGLSFGSNEHKMGWNAQPTRAVILEDARVPATARLGQEGMGFKFAMAGL 237 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G + + A S+ G + +L +A+ Y R G L ++ IAD+A Sbjct: 238 DGGRI---------NIAACSIGGAQAALDKALTYMSERKAFGQTLDRFQALQFRIADMAT 288 Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ AA R A++ D AK + A A+ A T + V A++ GG G Sbjct: 289 ELEAARTFVHRAASALDAGAKDATRLCAMAKRFATDTGF-------EVANNALQLFGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV 454 Y+ + + + R+ + IL G+ M L V Sbjct: 342 YLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372 >gi|121611018|ref|YP_998825.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121555658|gb|ABM59807.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 388 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 32/328 (9%) Query: 137 AARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSV 196 A +LY +AQ+E + + + + P + + + + SR Y P PM ++ Sbjct: 66 ADQLYAVAQIEEIARAGCTGIGFGLHSEIVAPYILRYGSAEQKSR-YLP----PMASGAM 120 Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254 + ++E G+D+ I +Q + +DG Y L G K F+++ +D I++A+ + G Sbjct: 121 IGAIAMSEPAAGSDLQGIQTQAIQSADGSHYLLRGSKTFITNGWHADLVIVVAKTDPAAG 180 Query: 255 CFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV-STGPV 309 + LL E G P +RLK K+G ++ T EL F N G LLG + G + Sbjct: 181 AKGISLLLVERGMPGFEAGRRLK-KVGLKAQDTAELFFDNVRVPAGNLLGGPALQGRGFI 239 Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362 M+ L + L AI +V+ + ++ + Y ++R V G QPV + +A++ Sbjct: 240 CLMEQLPWERLQIAITAVAAAQAAIDSTVDYVKQRQVFG-----QPVAAFQNTRYTLAEL 294 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A + + K S A+ A KYW + V+ E ++ GG Sbjct: 295 QTEVQVARVFVDKCCELLLQQKLDSASASMA-------KYWTTDLQCKVMDECVQLHGGY 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y ++ I G+ M Sbjct: 348 GYMWEYPIARAYADARVQRIYGGTNEIM 375 >gi|229490935|ref|ZP_04384770.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229322325|gb|EEN88111.1| long-chain specific acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 411 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ + D + L+G K F+++ + +D I++A + G Sbjct: 155 IAMTEPGTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGF 213 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG ++ T EL F++ F +L+ +L Sbjct: 214 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNL-- 271 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I A+++ + M L I Y R R G + + +A++A Sbjct: 272 ---PQERLSI------AVVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 322 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A L + + K +EAA A K+W + +I ++ GG GY Sbjct: 323 ETTAVRILVDKFIEQLNAEKLTVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 375 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 ++E +A+ Y +S +I G+ M Sbjct: 376 MKEYPVAKAYMDSRVQTIYGGTTEIM 401 >gi|182419350|ref|ZP_02950602.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum 5521] gi|237666601|ref|ZP_04526586.1| acyl-coa dehydrogenase, short-chain specific (scad)(butyryl-coa dehydrogenase) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376681|gb|EDT74253.1| acyl-coa dehydrogenase, short-chain specific [Clostridium butyricum 5521] gi|237657800|gb|EEP55355.1| butyryl-CoA dehydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 379 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD A + + D Y L+G K F+++ +++ FI+ A + +G + Sbjct: 123 FGLTEPGAGTDAAGQQTTARLEGDH-YVLNGSKIFITNGGVAETFIVFAMTDKSMGTRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + S G +L+NK+G R+++T EL F + L+G G MK Sbjct: 182 SAFIVEKSFPGFSIGKLENKMGIRASSTTELIFEDCIVPKENLIGKEGKGFGIA--MKT- 238 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ + +A EA+ Y + R L ++ IA++ + I AA Sbjct: 239 --LDGGRIGIAAQALGIAEGAFDEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKIEAAK 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A S +AA A++ A +A V +A++ GG GY +E + Sbjct: 297 HLVYKAAWKKQNGMPYSVDAARAKLFA-------ADVAMEVTTKAVQLFGGYGYTKEYPV 349 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 350 ERMMRDAKITEIYEGT 365 >gi|170051566|ref|XP_001861821.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167872758|gb|EDS36141.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] Length = 404 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 121/259 (46%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G+K W ++ +++ ++ A + + Sbjct: 144 FALSEPGNGSDAGAASTVAALKGD-RWVLNGNKCWITNAYEAESAVVFATTDKSMKHKGI 202 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VPR + G + ++K+G R ++T +L F + + N+ P K Sbjct: 203 SAFIVPR-----NAPGFSLGKKEDKLGIRGSSTAQLIFEDC---EIPKENLLGEPGMGFK 254 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++ + +A+A + YA +R G + ++ IAD++L + Sbjct: 255 IAMQTLDAGRIGIASQALGIAQASLECAVDYANKRIAFGKPISKLQSIQSKIADMSLGLE 314 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D ++EAA A++ A + +C + ++ +GG GY+ + Sbjct: 315 SARLLTWRAAWLKDNKHPFTKEAAQAKLAASESATFCAH-------QCIQILGGMGYVSD 367 Query: 428 RSIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 368 MPAERHYRDARITEIYEGT 386 >gi|47939362|gb|AAH71366.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio] Length = 442 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 29/275 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ MSD I++ Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGVKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 A E + + L D G R K+G ++ T EL F + LLG Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288 Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +N ++ P E + I A+M ++ E+ +Y +R G + D V+ Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A++ +I A E K S A+ A KYW + V + Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IA+ + ++ I G+ M Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430 >gi|27379066|ref|NP_770595.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27352216|dbj|BAC49220.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 381 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 28/272 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ G G + L Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDH-YVLNGQKQFISGAGGTDLLVAMVRTGGDGPGGISTL 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPV 309 + DG+ G+ + + K+G + T + F N GF + + G Sbjct: 183 VIDGNTPGVSFGANERKMGWNAQPTRAVMFENARVPVANRLSEEGVGFKIAMAGLDGG-- 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ S+ G + +L +A +Y + R G L + ++ +AD+A+++ AA Sbjct: 241 -------RLNITACSLGGAQTALDKARNYMKERKAFGKRLDEFQALQFRLADMAIELEAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +R A + D A ++ + K + + V +A++ GG GY+ E Sbjct: 294 RTFLWRAAAALDRKDPD------ATMLCAMAKRFGTDVGFEVANQALQLHGGYGYLSEYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 I + R+ + IL G+ M L V L +G Sbjct: 348 IEKIVRDLRVHQILEGTNEIMRLIVARKLIEG 379 >gi|145221687|ref|YP_001132365.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214173|gb|ABP43577.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 464 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 75/332 (22%), Positives = 143/332 (43%), Gaps = 58/332 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P WAP+ F D ++ ++AI +E GG+D+ + + + Sbjct: 96 SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145 Query: 220 KIS---DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270 + D + + GHK W + +++ ++ A V+ +G F+VP G+P GL Sbjct: 146 RAGPEPDADWIIDGHKMWIGNGGIANVHVVNAVVDQELGHKGQALFVVP----GGTP-GL 200 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306 R +K+G R++ T EL+F++ LLG + + Sbjct: 201 DMVRKLDKLGCRASHTAELKFNSVRVPADHLLGGQEKLDHKLARAREAVEGGRHSGSATL 260 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G E + ++ A ++ R +L YA RR GG +ID + +AD+A + Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGGPIIDNQGISFPLADLATGL 316 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++R S+ A + R ++K ++A A++ +GG GY++ Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAIQTMGGYGYVK 370 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + + + YR++ +I G+ + + N L Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402 >gi|159901122|ref|YP_001547369.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159894161|gb|ABX07241.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 379 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 20/266 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIML 246 AP+ L+E G+D AA + + + DG Y ++G K W + +D +++ Sbjct: 112 APLASGQKLGAFSLSEPGAGSDAAA--QKTRAVEDGDYYIITGTKNWVTNGSKADTILLM 169 Query: 247 AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 G + L D G+ ++++K+G RS + ++ + G+ + + Sbjct: 170 TMTAPEKGVKGITAFLIDTHEPGVSILKVEDKLGIRSAQSAQMSYD---GYRVHKSRMLG 226 Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 P E KI + L+ + ++ + +A+ A+ YA+ R G +I+ + +A Sbjct: 227 QPGEGFKIAMTILNGGRIGIASQALGIAQGAYEAALDYAKVREQFGQSIINFQAVGFTLA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A I AA L++ A D+ ++ AA A++ A T W +A++ G Sbjct: 287 DMATRIKAARMLTYHAAWLKDQGENYIAAAAMAKVYASETAMWTA-------TKAVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 +GY +E + R++R++ I G+ Sbjct: 340 SNGYSKEYPVERYFRDAKITEIYEGT 365 >gi|309812986|ref|ZP_07706714.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] gi|308433058|gb|EFP56962.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] Length = 388 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 36/313 (11%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRG 207 G ++ + + +VA T + K W PK+ S E+ +G +G+TE Sbjct: 93 GFVVHAIIVTHYIVAYGTEEQKRK-WLPKLCSGEW--------------VGAVGMTEPGA 137 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA------QVEGRVGCFLVPR 260 G+D+ ++++ + D + ++G K F+++ +D +++A + G G L+ Sbjct: 138 GSDLKRVSTRAVRDGDE-FVINGSKTFITNAGHADLIVLVARTCERDKAAGHKGISLI-- 194 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317 +LE +G R+ KIG T EL F++ LLG+ + + Sbjct: 195 VLETADLDGFERGRVLQKIGQHGQDTRELHFTDMRVPVANLLGEEGRGFYHLMEQLPQER 254 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L A +V +++ + +A+ R + G L+D + +A+ + D+ AA L Sbjct: 255 LGLACTAVGSAELAVKLGVEHAKSRELFDGTLMDLQNTRFVLAECSTDVLAARTLLDHCI 314 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 E K S A+ A KYW + VI ++ GG G++ E IA+ Y + Sbjct: 315 MLHMEGKLDSATASRA-------KYWTTDVQCNVIDRVLQLFGGYGFMLEYPIAKMYAGA 367 Query: 438 PANSILLGSGNAM 450 I G+ M Sbjct: 368 RIQKIYGGANEVM 380 >gi|302526280|ref|ZP_07278622.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302435175|gb|EFL06991.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 384 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 20/281 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ GL+E+ G+D A++ + D + L+G K W ++ S+ + +LA Sbjct: 115 PLASGEAGFSYGLSERDAGSDTASMRCRATPSGDD-WILNGQKSWITNAGFSEYYTVLAV 173 Query: 249 VE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + GR G + ++E P G + + K+G + + T EL F + GD V Sbjct: 174 TDPDGRRGANVTAFVVEKSDP-GFSFGAKEKKLGIKGSPTRELLFDQVR--IPGDRIVGE 230 Query: 307 GPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 P + +KI L LD ++++ V +A+ A+ Y + R G + D ++ +A Sbjct: 231 -PGQGLKIALKTLDHTRVTIAAQAVGIAQGALDHALAYVKERKQFGKHIADFQGIQFMLA 289 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ + A + + A AKS + + K +A +V +A++ +G Sbjct: 290 DMAMAVETARQMVYTAA-----AKSERGDDDLS-FFGAAAKCHASDVAMSVTTDAVQLLG 343 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G GY + + R R++ I G+ L + L KG Sbjct: 344 GYGYTRDFPLERMMRDAKITQIYEGTNQIQRLVMARQLLKG 384 >gi|169796360|ref|YP_001714153.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213156904|ref|YP_002318949.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215483821|ref|YP_002326046.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|332851984|ref|ZP_08433851.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332871715|ref|ZP_08440175.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|169149287|emb|CAM87170.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|213056064|gb|ACJ40966.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213988701|gb|ACJ59000.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB307-0294] gi|332729561|gb|EGJ60899.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332731283|gb|EGJ62580.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 383 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V D G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV L ++++YA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A++ A +M V ++ GG+GYI E + Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|147678769|ref|YP_001212984.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] gi|146274866|dbj|BAF60615.1| acyl-CoA dehydrogenases [Pelotomaculum thermopropionicum SI] Length = 381 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 20/265 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ Q + DG Y ++G K F+++ + + ++A + G Sbjct: 125 FALTEPGAGSDAGSV--QTTAVLDGNEYVINGSKCFITTGGYASIYTVIASTDTSKGVKG 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + + + G+ + +NK+G R++ TVEL F N + N+ E K+ + Sbjct: 183 LSAFIVEAEREGIFVGKHENKMGIRASNTVELMFKNV---RVPKENLIGKEGEGFKLAMQ 239 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS ++ + M V L++A + + + G +L ++ +AD+ + + Sbjct: 240 TLDSGRINQAAMAVGLSQAALEAVVDFVNGQQRGGKLLAKSQYIQFKVADMCMAVETCRN 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +++ D + S+EAA I K +C A V +EA++ G GY+++ + Sbjct: 300 MVYKVCYLKDSGQHFSKEAA-------IAKAYCTDTAMWVASEAVDIFGIYGYMKDSPVE 352 Query: 432 RHYRESPANSILLGSGNAMVLDVLN 456 + YR+ I G+ + + N Sbjct: 353 KLYRDVKVMQIYEGTNQVQRIVIAN 377 >gi|302875798|ref|YP_003844431.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] gi|307689233|ref|ZP_07631679.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] gi|302578655|gb|ADL52667.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium cellulovorans 743B] Length = 379 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ ++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLDGDNYILNGSKIFITNGGYAETFIVFAMTDRSKGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + S G +++ K+G R+++T EL F N LLG + G MK Sbjct: 181 ISAFIVEKSFPGFSIGKVEEKLGIRASSTTELIFENCVVPKENLLGQVGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + ++ + +A EA Y + R G L ++ +AD+ + I +A Sbjct: 239 ---LDGGRIGIAAQALGIAGGAFNEAKAYMKERKQFGRSLDKFQGLQWMMADMEVAIESA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A D+ + EAA A++ A +A V +A++ GG GY E Sbjct: 296 RYLVYLAAWKKDQGLPYTVEAARAKLHA-------ANVAMDVTTKAVQLFGGYGYTAEYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|259418857|ref|ZP_05742774.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp. TrichCH4B] gi|259345079|gb|EEW56933.1| isovaleryl-CoA dehydrogenase 2 domain protein [Silicibacter sp. TrichCH4B] Length = 387 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRND-RYVLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + G + +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ + E + Y R G + + +M+ IAD+ + A Sbjct: 247 ERVVLAGIGTGIMASC-----MDEMMPYMAERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426 A + +A + D+ ++AA CC A V +A++ GG+GY+ Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370 >gi|226306262|ref|YP_002766222.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226185379|dbj|BAH33483.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 380 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ + D + L+G K F+++ + +D I++A + G Sbjct: 124 IAMTEPGTGSDLQGIKTKAVRDGDH-WVLNGSKTFITNGINADIIIVVACTDPDKGAQGF 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG ++ T EL F++ F +L+ +L Sbjct: 183 SLLVVERDMPGFERGRNLDKIGMKAQDTAELSFTDVRVPAANLLGEEGMGFFYLMKNL-- 240 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I A+++ + M L I Y R R G + + +A++A Sbjct: 241 ---PQERLSI------AVVAAAAMESVLESTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A L + + K +EAA A K+W + +I ++ GG GY Sbjct: 292 ETTAVRILVDKFIEQLNAEKLTVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 ++E +A+ Y +S +I G+ M Sbjct: 345 MKEYPVAKAYMDSRVQTIYGGTTEIM 370 >gi|127512598|ref|YP_001093795.1| butyryl-CoA dehydrogenase [Shewanella loihica PV-4] gi|126637893|gb|ABO23536.1| Butyryl-CoA dehydrogenase [Shewanella loihica PV-4] Length = 385 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S S +++ G G + + Sbjct: 124 LTEAGAGSDAASLKTKAVREGDE-YVISGAKMFISGAGSTELLVVMCRTGDAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T E+ F LLG+ G MK L Sbjct: 183 AIPADAAGISYGKAEDKMGWNAQPTREITFDKVRVPVTNLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A SV + +L A Y R G + ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSVGTAQAALERAQQYMNERQQFGKPIAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E AY + K + + V A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDSGDPEATAYC----AMAKRFATDVGFNVCDSALQLHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|322709234|gb|EFZ00810.1| acyl-CoA dehydrogenase [Metarhizium anisopliae ARSEF 23] Length = 570 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 42/301 (13%) Query: 143 MAQLEAG---HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 M+++E G L S A + T + W P +F+R+ + Sbjct: 248 MSRVEGGVGIALAGASSIGAPPIVNCGTEEQKRKWLPGLFTRKTN-------------FS 294 Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFL 257 LG+TE GG+D+A I + +K DG Y ++G KW +P + + A GR G Sbjct: 295 LGITEPSGGSDVARIKTTAEKTPDGKFYIVNGVKKWITGTPWA-THMTTAVRTGRPGMKG 353 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVSTGPVED 311 V L+ G+ +Q+++N N A+ V + N LLG+ N E Sbjct: 354 VSLLVIPMDSPGIMHQKIQNSGQNAGGASFVYLENVRVPVEN----LLGEEN------EG 403 Query: 312 MKILIY---LDSAIMSVS---GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 I++ + +++V R LA + YA +R G LI+ V++R ++++A Sbjct: 404 FMIIMKNFNKERFLLTVGCNRKARSCLAMSFQYAMKRETFGKPLIENQVIRRKLSEMAHR 463 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A A +LA + E+ A +A + K ++ EA + GG+GY+ Sbjct: 464 IEAHWAWLEQLAYHIKCSDLGWEDPQIASRVA-LLKVQGGQLIELAAREAAQIFGGAGYM 522 Query: 426 E 426 + Sbjct: 523 K 523 >gi|310824678|ref|YP_003957036.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca DW4/3-1] gi|309397750|gb|ADO75209.1| Acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca DW4/3-1] Length = 600 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 51/391 (13%) Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI---RAARLYLMA-QLEAGHLMSPSVTSA 159 H L+R+ + + S P V Q + A YLMA L A + ++ +A Sbjct: 78 HPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYVGLTIGAA 137 Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 ++ TP + + + +++ E+ T + LTE + G+ + + ++ Sbjct: 138 HLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLGDVKARAF 184 Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS-- 266 DG Y +SG K F+S D + LA++EG + F VP +G Sbjct: 185 PAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSRRPEGDRL 244 Query: 267 -PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 N + + +KIG R ++ L + + G+L+G+ N + M + + Sbjct: 245 VDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNEARIMVGL 304 Query: 323 MSVSGMRVSLAEAIHYARRR---HVSGGILIDQP--------------VMKRAIADIALD 365 V+ V+ EA+ YAR R +G QP + ++AI + L Sbjct: 305 NGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKAIVEGGLS 364 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AAT++ LA + ++R ++ P+ K + + A++ GG GY Sbjct: 365 LLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQVHGGYGYS 424 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456 E R+ NSI G+ LD+L Sbjct: 425 SEYLPEAWLRDQKLNSIHEGTTGIQGLDLLG 455 >gi|294010131|ref|YP_003543591.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S] gi|292673461|dbj|BAI94979.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S] Length = 599 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 51/311 (16%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML 246 PM + ++E + G+ + I ++ + DG Y L G K ++S +S+ + L Sbjct: 155 PMLAGRFTGTMCMSEPQAGSSLGDIRTRAELQPDGSYRLFGTKMWISGGDHELSETIVHL 214 Query: 247 AQVEGRVG----------CFLVPR-LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFS 292 V R G F+VP+ ++ DG+P N + L +K+GNR+ L Sbjct: 215 --VLARTGPAEHGVRGLSLFIVPKHIVRDGNPAERNDVALVGLNHKMGNRATTNCVLSLG 272 Query: 293 N----------TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHY 338 + G+ +G+ N + M +I++ L + ++ +G A+ Y Sbjct: 273 DGQFAVDGQAGAVGYRIGEENRGLSYMFHMMNEARIVVGLGAVMLGYTGY----LHAVQY 328 Query: 339 ARRR------HVSGG---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 AR R GG +I +++ + + AL LA D+ + EE Sbjct: 329 ARDRPQGRALTQKGGDPVAIIQHADVRQMLLTQKAYVEGGLALCLYLAKLLDDQSTGDEE 388 Query: 390 AA-----YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 A ++ PI K W K A++ GG+GY + + + YR++ N+I Sbjct: 389 TARRAYLLLDLLTPIGKSWPAKWCLEANNLAIQVHGGAGYTHDFPVEQFYRDNRINAIHE 448 Query: 445 GSGNAMVLDVL 455 G+ LD+L Sbjct: 449 GTHGIQALDLL 459 >gi|110832882|ref|YP_691741.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110645993|emb|CAL15469.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 383 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 31/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV----EGRVGCF 256 LTE G+D A +++ +K +G Y L+G K F+S +D +++A+ G V CF Sbjct: 124 LTEPNAGSDAAGLSTTAKK-DNGDYVLNGAKAFISGAGDTDVLVLMARTGGPGAGGVSCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 VP G+ Y R + K+G +S T V + G ++ G + Sbjct: 183 AVP-----ADAPGVSYGRNEAKMGWKSQPTRAVILEDVRIPAECLIGEEGQGFKIAMGGL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A S+ + +L +A Y + R G + D ++ +AD+A ++ AA Sbjct: 238 DGGRINI----ASCSLGAAQAALHQAQQYVQERKQFGQAISDFQTVQFTLADMATELVAA 293 Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A D+ S +S A A+ MA + C A++ GG GYI E Sbjct: 294 QQMVRLAAWKLDQNHSDKSMLCAMAKRMATDLCFNVCN-------HALQLHGGYGYITEY 346 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 + R+ R++ + IL G+ M V+ N+L+ Sbjct: 347 PLERYLRDARVHQILEGTNEIMRVIIARNVLK 378 >gi|46128265|ref|XP_388686.1| hypothetical protein FG08510.1 [Gibberella zeae PH-1] Length = 426 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 30/278 (10%) Query: 187 NKAPMQK----------TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 N +P QK TSV L ++E G+D+ ++ + + + DG Y L+G K W Sbjct: 142 NGSPEQKQKYLPGLIAGTSVG-ALAMSESGAGSDVVSMRTTAKAV-DGGYVLNGSKMWIT 199 Query: 236 SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + P +D ++ A+ E + + D G R +K+G R + T EL F F Sbjct: 200 NGPDADFIVVYAKTEPEKNSKGITAFIVDTKTEGFSCARKLDKMGMRGSNTGELMFDGVF 259 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGIL 349 +LG +N G V + + L+ ++S M+ +L + + +R G + Sbjct: 260 VPTENILGKVN---GGVRVLMEGLDLERLVLSAGPLGIMQAALDVTLPFTHQRKQFGQPI 316 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMA 408 +++ +AD+ + A+ ++ A + DE R+++ A A + + + A Sbjct: 317 AHNQLLQGKLADMYTKLQASRCYTYATAKAVDENGLIRTQDCAGAIL-------YAAERA 369 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ +GG GY+EE +R R++ I G+ Sbjct: 370 TECTLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGT 407 >gi|256371816|ref|YP_003109640.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008400|gb|ACU53967.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 381 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 144/308 (46%), Gaps = 26/308 (8%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S+V M TP + + + ++ PT ++ S+A + ++E G+D+AA+ ++ Sbjct: 88 SVVTDMATPSLARYGSHELKLHYLVPT----LRGDSIA-SVAVSEPDAGSDVAALRTRAV 142 Query: 220 KISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 + D + ++G K ++++ +D +LA+ G + +++ G R +K Sbjct: 143 RDGDD-WVITGTKLYITNGTQADWICLLARTSDEGGYRGMSQIVVPTDAPGFRVARALDK 201 Query: 279 IGNRSNATVEL-------EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +GN ++ T EL SNT G + ++ +++ ++ +V M + Sbjct: 202 LGNHASDTAELVLEECRVPVSNTIGTIGRGFQQQMAQFQNERMI----ASYSAVGAMERA 257 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L YAR R V G L+ + ++ +A+++ ++ ++ A ++ + + Sbjct: 258 LERTAAYARERMVFGEPLLAKQYVQFRLAELSAEVDLLRHYNYACAEAYMAGEDTTR--- 314 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A I K +++ AV ++ GG+GY+EE ++R++R++ SI G + ++ Sbjct: 315 ----FATIAKLTAGRLSRAVADWCLQLHGGAGYMEETWVSRYFRDARLLSI-GGGADEVM 369 Query: 452 LDVLNLLE 459 L +L LE Sbjct: 370 LQILTRLE 377 >gi|254390358|ref|ZP_05005575.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294813837|ref|ZP_06772480.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|326442255|ref|ZP_08216989.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197704062|gb|EDY49874.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294326436|gb|EFG08079.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 608 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAVRQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG+ +++K+G +++ T E+ F + G+L+G+ Sbjct: 224 KGLSLFLVPKYEFDVETGELGERNGVYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGE 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + KI+ + + +++ + A+ YA+ R V G L++ Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGSDLVNFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYARI-----MAPI 399 P ++R++ AL A+ DE K ++E+A I + PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQDEIAVKEAADESAAELIALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + + +A++++ GGSGY++E + ++ R++ +++ G+ Sbjct: 401 VKGYGSERSYEQLAQSLQIFGGSGYLQEYPVEQYIRDAKIDTLYEGT 447 >gi|114563892|ref|YP_751406.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400] gi|114335185|gb|ABI72567.1| isovaleryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400] Length = 389 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P + IG L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNDAQKAKYLPKLVSGEHIGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + + Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLEKGAHGITAFIVE 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F + + + N+ G +K+L+ LD + Sbjct: 195 RGSKGFSQAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +SG + + A + Y R G + +++ +AD+ + AA A + +A Sbjct: 252 VLSGGPLGIMSACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAARAYVYSVAK 311 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R++ Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364 Query: 439 ANSILLGS 446 I G+ Sbjct: 365 LYEIGAGT 372 >gi|312212046|emb|CBX92130.1| similar to acyl-CoA dehydrogenase domain protein [Leptosphaeria maculans] Length = 438 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 47/315 (14%) Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 A + + +V + +A T + ++ PKI S E + G+T Sbjct: 120 AGMAGAQAIHANVYATQPLAKFGTEKQLQETIPKIISGE-------------IRTCFGVT 166 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---------V 253 E G D +++Q +K+ DG Y ++G K W + ++D I+LA+ R + Sbjct: 167 EPNAGLDTLRLSTQAKKLDDGTYTVTGQKIWITCAQVADRMILLARTAAREEAETPSKAL 226 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F +P D S GL +R+K K+G R+ E+ F N + L G E K Sbjct: 227 SMFCIPI---DRSAPGLDMRRIK-KMGGRAVDANEVFFDN-YKVPADCLVGKEG--EGFK 279 Query: 314 ILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362 I+++ +++ ++G + +LA+A YAR R ++ +P+ + +AD Sbjct: 280 IILHGMNAERCLLAGEALGLGYAALAKASSYARER-----VVFQRPIGMNQGVAHPLADA 334 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA ++ A +D +K+ A + A KY + A A+ GG Sbjct: 335 YMRLEAAKLATYHAARLYDASKTDDTIRQDAIGVAANSAKYLAAEAAFTACERAILAHGG 394 Query: 422 SGYIEERSIARHYRE 436 GY +E + R +RE Sbjct: 395 MGYAQEYDVERWFRE 409 >gi|301061482|ref|ZP_07202246.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300444400|gb|EFK08401.1| putative acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 391 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 36/285 (12%) Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 PM AI G +TE G+DI ++ S+ K DG Y L+G K F+++ F++ Sbjct: 120 PMVTGGEAIFGCAITEANAGSDIFSVRSKAVK-KDGGYVLNGSKMFITNGSIADFLL--- 175 Query: 249 VEGRVGCFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 V C P LL D G +L K+G R++ T L FS+ L Sbjct: 176 ----VFCITNPEAKSRYEKYSFLLLDTKTEGFEADKLNGKMGIRASDTASLSFSDV---L 228 Query: 299 LGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILID 351 + ++N+ G + + I G+ V+ L A+ Y + R G L Sbjct: 229 IPEVNLLGGQEGKGFRQVMECFNFNRIIAGSQGVGVAQGALDLAVKYMKEREQFGKPLTS 288 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ +A++A + AA AL A D + + A+++A T A V Sbjct: 289 FQGLQFKLAEMASRVEAARALVRMGAWMIDNGTLDPKIVSIAKLVAGET-------AVRV 341 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 EA++ GG GY++E + R YR++ I G+ + V N Sbjct: 342 TDEALQLHGGYGYMDEYHVERFYRDAKIVEIYEGAKEIEKITVAN 386 >gi|253680925|ref|ZP_04861728.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] gi|253562774|gb|EES92220.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] Length = 379 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + DG Y L+G K F++ +P++D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--GQTIAVKDGDKYILNGQKCFITNAPIADVFVIFAMTDKSKGNKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KIL 315 + + + G+ ++++K+G E+ +L D V P E++ K Sbjct: 181 ISAFIVEKEYPGISIGKVEDKMGINGAQVGEI--------ILEDCPV---PAENLLGKEG 229 Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363 A+ ++ G R+ +A EA Y + R G L + +AD+ Sbjct: 230 RGFGIAMKTLDGGRIGVAAQGLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMD 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I A L ++ A + K S AA A++ C A V EA++ GG G Sbjct: 290 VRIEQARYLLYKAAMDKNNGKPYSVSAARAKLA-------CTDAAMYVTTEAVQLFGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI++ + R +R++ I G+ Sbjct: 343 YIKDYPVERMFRDAKITQIYEGT 365 >gi|114765989|ref|ZP_01445001.1| acyl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114541707|gb|EAU44746.1| acyl-CoA dehydrogenase [Roseovarius sp. HTCC2601] Length = 380 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 14/264 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE G+D+AA+T+ ++ D Y + G K W ++D ++ A+ + G + Sbjct: 123 VTEPDHGSDVAAMTTTARREGDE-YVIKGTKAWVTFGQVADVIMVFAKTDPEAGHRGISC 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-DLNVSTGPVEDMKILI 316 +L + G+ + + +G A + F + G L+G + +E+ Sbjct: 182 ILVETDRAGVSRGKSEELLGMHGLAECMVSFDDVRVPVGNLIGPEHGAFKMAMENFNFSR 241 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + S+ M++ + ++ +AI YA R G + + ++ IAD+A DI+AA L Sbjct: 242 LMMSS-MALGMAQAAMEDAIAYANDRKQFGKPIFEHQAVQFMIADMAKDISAARLLIHNA 300 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +D + + EAA A K + MA I+ A++ GG+GY E + R +R+ Sbjct: 301 AKLYDAGQPIALEAAQA-------KLFTTDMAQGHISNALQIHGGNGYSREFRVERLFRD 353 Query: 437 SPANSILLGSGNAMVLDVLNLLEK 460 + I G+ + + ++K Sbjct: 354 VRLSQIYEGTNQIQRMIIARQVQK 377 >gi|281203924|gb|EFA78120.1| isovaleryl-CoA dehydrogenase [Polysphondylium pallidum PN500] Length = 424 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 30/265 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ K S G + L+G K W + P +D ++ A+ + G + Sbjct: 155 LAMSEPNAGSDVVSMKTRATKTSGG-WVLNGTKMWITNGPDADVLVVYAKTDINAGSKGI 213 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--- 315 L + G + +K+G R + T EL F + F + D NV + +K+L Sbjct: 214 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVLQDVGKGVKVLMSG 270 Query: 316 --------------IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 I+++S+ + +S M+ + + Y +R G + + +M+ +AD Sbjct: 271 LDYERLVLSAGPLGIFINSSHV-ISIMQACMDNVVPYLHQREQFGKKIGEFQLMQGKVAD 329 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A+ + + +A S D + ++ A A I+ + + A +A++ +GG Sbjct: 330 MYTIMNASRSYVYSVAKSADNGYTSRKDCA-AVIL------YTAENATQCALQAIQTLGG 382 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GYI E R R++ I G+ Sbjct: 383 NGYINEFPTGRLLRDAKLYEIGAGT 407 >gi|256787593|ref|ZP_05526024.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289771486|ref|ZP_06530864.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289701685|gb|EFD69114.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 385 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 49/276 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 + +TE G+D+A + S + DG Y L+G K F++ + +D I+ A+ E R Sbjct: 124 IAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTAAPTAEDR 183 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F V D G R +K+G R++ T EL F D+ V PV Sbjct: 184 RHGISLFAV-----DTKSQGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PV 227 Query: 310 EDM-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354 ED+ K YL + S G A+ +A++ +V + +PV Sbjct: 228 EDLLGEENKGFSYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQDRTVFGKPVAHFQN 286 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 K +A ++ AA A+ R + D + EAA A++ +C ++A VI Sbjct: 287 TKFELAACQAEVDAAEAVVDRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDR 339 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR Y ++ N I G+ M Sbjct: 340 CLQLHGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375 >gi|293608478|ref|ZP_06690781.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829051|gb|EFF87413.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 383 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 16/242 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ + G + Sbjct: 124 LTEPDAGSDAASLKTSAVKEGD-FYILNGTKRFITNAPHAGVFTVMARTNTDIKGAGGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 183 AFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A +SV L ++++YA R G + + +++ +AD +I AA + Sbjct: 242 KGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVL 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D ++ S EA+ A++ A +M V ++ GG+GYI E +I R Y Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|111026859|ref|YP_708837.1| isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110825398|gb|ABH00679.1| possible isovaleryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 380 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 38/272 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ---VEGR-VG 254 L +TE G+D ++ ++ + ++G + L+G K F+++ P++D ++ A+ VE R + Sbjct: 124 LAITEPEAGSDAMSMRTKATR-TEGGWLLNGAKTFITNGPVADLALVYAKTGPVEDRELA 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F V D + G R +K+G R + T EL FS+ F + D V G +K+ Sbjct: 183 LFAV-----DTTAPGFSKGRKLDKLGWRGSPTGELAFSDCF---VPDDAVIGGIGNGIKV 234 Query: 315 L---IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L + + +M G+ ++ L EA+ YA R G + D +++ IAD+ + I Sbjct: 235 LRDGLASERVLMGAQGVGLAAGALREAVRYAGERRQFGRPIGDFQLIQAKIADMYVGIEL 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-----EAMECIGGSG 423 AL + A + D S A A CK+ + +A EA++ GG G Sbjct: 295 GRALVSKTAAAIDAGDSGLTRLASA-----------CKLHGSEVAMNAALEAVQIFGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL 455 Y E + R+ R+ A + +G G + + ++ Sbjct: 344 YTREFPVERYLRD--AKIMQIGGGTSEIQRII 373 >gi|331005153|ref|ZP_08328553.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989] gi|330421033|gb|EGG95299.1| Isovaleryl-CoA dehydrogenase [gamma proteobacterium IMCC1989] Length = 389 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMQLKAEKSGDH-YILNGNKMWITNGPDAHTYVIYAKTDTHAGSKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + N+ + +K+L+ Sbjct: 189 TAFIVERDSVGFSRHQKLDKLGMRGSNTCELVFQDC---PVPAENILGKEGQGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG V + +A + Y R G + + +++ +AD+ D++A+ A Sbjct: 246 LDFERTVLSGGPVGIMQACLDLVVPYIHDRKQFGQSIGEFQLIQGKVADMYTDLSASRAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ +++A A I+ + + A + +A++ +GG+GY+ E S R Sbjct: 306 LYAVAQSCDRGEATRKDSA-AVIL------YTAEKATQMALQAIQTLGGNGYVNEFSAGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|313836486|gb|EFS74200.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA2] gi|314928941|gb|EFS92772.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL044PA1] gi|314971068|gb|EFT15166.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL037PA3] gi|328906611|gb|EGG26386.1| acyl-CoA dehydrogenase [Propionibacterium sp. P08] Length = 387 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 125 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPSDSRH 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F +T G L+V+ G + Sbjct: 184 RISALMVHADDPGISYGAPEHKMGIRGSVTREVIFKDTRIPKERVIGRRGHGLSVALGTL 243 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 244 DNSRVSI----AAQAVGIAQGALDTATDYVQKRRQFGQPLSNFEGIQFMLADMAMRLEAA 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A +V +A++ +GG GY +E + Sbjct: 300 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMSVCTDAVQLLGGIGYSKESA 353 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 354 VERMFRDAKVTQIYEGT 370 >gi|293401546|ref|ZP_06645689.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305184|gb|EFE46430.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 379 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ +D +++ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVKDGDDYILNGTKIFITNAGEADVYVIFAMTDKSKGTHG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 + ++E G P G + + K+G R +AT EL F+N + LLG + K Sbjct: 181 ISAFIVEKGMP-GFTVGQHEKKLGIRGSATSELIFNNVRLSKDQLLGQEG------KGFK 233 Query: 314 ILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIAD 361 I A+M++ G R+ +A E + Y + R G + + +AD Sbjct: 234 I------AMMTLDGGRIGIAAQALGIAQGAIDEVVPYVKSRKQFGRPISKFQNTQFQLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L ++ A + + + + AA A++ A ++A V +A++ +GG Sbjct: 288 MQVKTDAARLLVYQAAMAKENGQPYTYLAAEAKLFA-------AEVAMEVTTKAIQLMGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY + + R +R++ I G+ Sbjct: 341 YGYTRDYPVERMFRDAKITEIYEGT 365 >gi|269925485|ref|YP_003322108.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789145|gb|ACZ41286.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 386 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 22/270 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE GTD A+I ++ + D Y L+G K W ++ + FI+ A+ + R + Sbjct: 127 FALTEPESGTDAASIQTRASRDGDH-YFLTGTKVWITNASHAGLFIVFARTDNRGNHKDI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + D GL ++K+G ++ + TV L+ G + + + KI + Sbjct: 186 SAFIVDRESPGLVVDPSESKLGIKAAHSCTVHLD-----GVKVSARDRLGEEGQGFKIAM 240 Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ V + +A I YA +R G + + ++ IAD+A + AA Sbjct: 241 QSLDGGRIGIAAQAVGIGQACLEMSIQYAVQRRQFGRPIAEFQAIQWKIADMATQVEAAR 300 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A D+ ++ + + A + K + +M + EA++ G GY E + Sbjct: 301 LLTYRAAMLEDKGENIT-------LAASMAKLFASEMCVSAAREAIQIHGSLGYSAEYPV 353 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + YR+S I G+ A + + + L K Sbjct: 354 EKFYRDSKVTEIYEGTSEAQRMVIASRLLK 383 >gi|33595881|ref|NP_883524.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565960|emb|CAE36511.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis] Length = 418 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 GLTE G+D + ++ K DG Y L+G+K W +SP++D F++ A+ +G++ Sbjct: 158 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 F +LE G GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 217 RGF----ILEKGM-KGLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 269 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365 L+SA ++ + AEA H AR+ R G L ++++ +AD+ + Sbjct: 270 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 325 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I RL DE+ + E + I K C A + A + +GG+G Sbjct: 326 ITLGLQGCLRLGRMKDESTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 378 Query: 426 EERSIARH 433 +E +ARH Sbjct: 379 DEFGVARH 386 >gi|327404531|ref|YP_004345369.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823] gi|327320039|gb|AEA44531.1| Butyryl-CoA dehydrogenase [Fluviicola taffensis DSM 16823] Length = 380 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 31/287 (10%) Query: 174 WAPKIFSREYDPTN-KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W + F E P+ K L+E G+D + + + D Y ++G K Sbjct: 96 WGLEKFGNEEQKVKFLTPLAKGEKIGAFCLSEPEAGSDATSQRTTAIDMGD-YYLVNGTK 154 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + + +I++AQ +G + L+ + G ++K+G R + T L F Sbjct: 155 NWITNGSTASTYIVIAQTNAELGHRGINALIIERGMEGFIVGAKEDKLGIRGSDTHTLMF 214 Query: 292 SNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 + FGF +S G +I I + ++ G ++ A Y+ Sbjct: 215 QDVKVPKANRIGEDGFGFKFAMKTLSGG-----RIGIAAQALGIAAGGFELAAA----YS 265 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G + + IAD+A +I AA L +R A D ++ + +A A++ Sbjct: 266 KERKAFGKEIYKHQAIAFKIADMATEIEAARLLVYRAAADKDAGRNFDQSSAMAKL---- 321 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + K+A EA++ GG GY++E + R R++ I G+ Sbjct: 322 ---YASKVAMEQTVEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGT 365 >gi|212636148|ref|YP_002312673.1| butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3] gi|212557632|gb|ACJ30086.1| Butyryl-CoA dehydrogenase [Shewanella piezotolerans WP3] Length = 385 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y +SG K F+S + +++ G G + + Sbjct: 124 LTEPGAGSDAASLQTKAVRDGDD-YLISGSKVFISGAGATEMLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 +G+ Y + ++K+G + T ++ F N LLG+ G MK L Sbjct: 183 AIAADADGVSYGKAEDKMGWNAQPTRQITFDNVRVPASNLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A S+ + +L A Y R G L ++ +AD+A ++ AA L RL Sbjct: 241 RINIATCSIGTAQAALERATGYMNERKQFGKPLAAFQALQFKLADMATELVAARQL-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F + E AY + K + + V A++ GG GYI E + RH R+ Sbjct: 300 A-AFKLDQQDPEATAYC----AMAKRFATDIGFQVCDAALQIHGGYGYIREYPLERHVRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|168702293|ref|ZP_02734570.1| acyl-CoA dehydrogenase domain protein [Gemmata obscuriglobus UQM 2246] Length = 384 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 40/309 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W + R+Y P K + GLTE G++ +TS +K D Y L+G Sbjct: 94 QTWGSEALKRKYLPA----AAKGEKILAFGLTEPDAGSNPREMTSTYEKRGDH-YVLNGV 148 Query: 232 KWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K+ +S+ ++ A + A G+VG + + D + G + +NA + + Sbjct: 149 KYLISNGGIAHAVVAFAYPAGQVGTGRISAFVVDTAAKGFEAESFA------ANAKMGMP 202 Query: 291 FSNTFGFLLGDLNVSTGPVEDMK---------ILIYLDSAIMSVSG-----MRVSLAEAI 336 SNT F + D+ V P E++ + L S +SV+ + LAEAI Sbjct: 203 TSNTAMFEMHDVAV---PAENLVGEEGDGFRVAMGTLVSGRLSVAAGCLGVIEDCLAEAI 259 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-------EE 389 YA+ R G + +++ IA I +D A+ AL R A EAK RS E Sbjct: 260 WYAKERKQHGKEIARHQLVQDHIAHIEMDRVASDALLIRAA----EAKDRSAASPGDKEL 315 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A +A ++A K + A A++ GG G+ RH + I G+ Sbjct: 316 ARHADLLAAQAKLFATNAAWDAADRAVQVFGGRGWSTLYRPGRHLTDVRVCRIYEGTDEI 375 Query: 450 MVLDVLNLL 458 + L + L Sbjct: 376 LKLKIAAAL 384 >gi|126665775|ref|ZP_01736756.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17] gi|126629709|gb|EBA00326.1| Glutaryl-CoA dehydrogenase [Marinobacter sp. ELB17] Length = 388 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 27/242 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + ++ +K+ DG Y +SG K W +SP++D F++ A+++G+V F++ Sbjct: 134 FGLTEPNHGSDPSGMETRAKKV-DGGYLVSGSKTWITNSPIADVFVIWAKLDGKVTGFVL 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316 R GL +++ K R++ T + + F L+V GP Sbjct: 193 ER-----GAKGLDTPKIEGKFSLRASETGSIFMDDVFCPDENKLDVDGLKGPFS------ 241 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A +S + AE A +Y R G L ++++ + D+ DIA Sbjct: 242 CLNKARYGISWGSLGAAEFCWHAARNYTLERKQFGKPLAANQLIQKKLVDMQTDIALGLQ 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +L D ++ + + + K C + + A + GG+G +E + Sbjct: 302 GALQLGRLMDAGEASPDAIS-------LMKRNNCGKSLDIARVARDMHGGNGISDEYHVI 354 Query: 432 RH 433 RH Sbjct: 355 RH 356 >gi|229584383|ref|YP_002842884.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] gi|228019432|gb|ACP54839.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus M.16.27] Length = 391 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 15/275 (5%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K + +TE GG+ I I ++ +K D Y +SG K F+++ P++D F++ A Sbjct: 126 PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGDQ-YIISGKKVFITNAPIADIFLVFAN 184 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305 + F++P +E GL + K+G R E+ N + LG+ Sbjct: 185 TSNGITAFIIPSNVE-----GLKIDKPIRKLGLRGAVFSEVSLDNVVVPIENRLGEEGEG 239 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + I + +A +++ L + YA R + LID ++K IA+ Sbjct: 240 INIARHIFIGGRIIAAAIALGIGDAVLDQVYQYAISRELGNHKLIDFQILKEKIANSETI 299 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A ++ +A D+ + +A I+K + + + EA+ GG GY Sbjct: 300 LQAGKIYTYYVAYLMDKMLRQELNE-----LASISKLFTTEGVLNISNEAISIFGGYGYT 354 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ +I ++R+ +I G+ + L + + L+K Sbjct: 355 DDLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389 >gi|86360109|ref|YP_471998.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86284211|gb|ABC93271.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 381 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W ++P +D ++ A+ + G + Sbjct: 124 LAMSEVGSGSDVVSMRLRAEKRGD-RYILNGAKFWITNAPHADVLVVYAKSDPAAGPKGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 + + + G + +K+G R + T EL F + L+G E +KIL Sbjct: 183 SAFIIEKALPGFSVSKKLSKLGMRGSDTAELVFQDCEVPAEALMGREG------EGVKIL 236 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G M+ L + Y R R G + D +M+ IAD+ + + +A Sbjct: 237 MSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D ++ +AA A + A + A V EA++ +GG+GY +E Sbjct: 297 RAYVYSVARACDAGRTTRTDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEWP 349 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 350 VERFLRDAKLYDIGAGT 366 >gi|77463064|ref|YP_352568.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|77387482|gb|ABA78667.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1] Length = 385 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/298 (21%), Positives = 132/298 (44%), Gaps = 39/298 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 101 NQIRLNGSPEQKARYLPKLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K +G Y L+G K W + P +D ++ A+ + G + L + S G + Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMTGFSTSPHFD 205 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----M 328 K+G R + T EL F N F +LG + +++L+ LD + +SG M Sbjct: 206 KVGMRGSNTGELIFENCEVPFENVLGQDG------KGVRVLMSGLDYERVVLSGIGTGIM 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 L E + Y + R G + + +M+ +AD+ + + A A + A + D + Sbjct: 260 AACLDEVVPYCQSRQQFGQPIGNFQLMQGKLADMYVALNTARAYVYETARACDAGRVTRA 319 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +AA + + + A +A++ +GG+G++ + ++R +R++ I G+ Sbjct: 320 DAAGCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRDAKLMEIGAGT 370 >gi|312066465|ref|XP_003136283.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa] gi|307768547|gb|EFO27781.1| acyl-CoA dehydrogenase domain-containing protein [Loa loa] Length = 618 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 31/270 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLA--QVEGRVG--- 254 LTE G+D ++ + +K SDG Y L+G K W + +D F + A QV+G+ G Sbjct: 197 LTESGTGSDANSVQTHAEKSSDGRCYVLNGGKLWISNGSFADVFTVFARTQVKGKDGTPK 256 Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 F+V R S G+ + K+G + + TVE+ F NT LLG G Sbjct: 257 SKISAFIVER-----SHGGVTTSVPEKKMGIKGSKTVEVHFDNTKVPVDNLLG--AEGEG 309 Query: 308 PVEDMKILIYLDSAIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M IL I +V M+ + + I + R G L + ++ + D+ L Sbjct: 310 FKLAMNILNNGRFGIPAVCTGSMKFCIQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLR 369 Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A +L + L+ + D E EAA +IMA + C A++ GG GY Sbjct: 370 HYATESLLYMLSGAMDRGIVDYELEAAVGKIMASENAWIVCD-------RAIQLHGGMGY 422 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454 ++E + R R+ I G+ + + L V Sbjct: 423 MKECGLERVMRDLRIFRIFEGANDVLRLFV 452 >gi|149926061|ref|ZP_01914324.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105] gi|149825349|gb|EDM84560.1| acyl-CoA dehydrogenase-like protein [Limnobacter sp. MED105] Length = 376 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 17/246 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI--YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 L +TE GG+D+A + ++ DG+ Y ++G K F++S + ++ +A G G Sbjct: 115 LAITEPSGGSDVANLKTKADLFQKDGVPHYRINGEKVFITSGVRADWLTVAVRTGEPGAR 174 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + L+ G+ GL LK K G + T + F N +L+G + + Sbjct: 175 GISVLMVPGNAKGLTRSPLK-KTGWWMSDTASIYFDNVEVPASYLVGKEGKGFRIIMENF 233 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A V RV L EA+ +A+ R G LI+ V+ +ADI + I A A Sbjct: 234 NTERLMLAGACVGFSRVCLNEALDWAQNRQTFGKRLIEHQVIAHKLADIRMKIRATEAW- 292 Query: 374 FRLANSFDEAKSRSEEAAY-ARIMAPIT--KYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 FDE +R ++ ++A I K + EA++ +GG G++ S Sbjct: 293 ------FDETIARIDQGDINEELVADICLLKNQSTQTLQHCANEAVQILGGMGFMRGSST 346 Query: 431 ARHYRE 436 R YRE Sbjct: 347 ERIYRE 352 >gi|298206608|ref|YP_003714787.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559] gi|83849238|gb|EAP87106.1| probable acyl-CoA dehydrogenase [Croceibacter atlanticus HTCC2559] Length = 386 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE G+D+AA+ + K D Y ++G K F+++ + SD ++ A+ +G + Sbjct: 122 LCVTEPFCGSDVAAMRTTAVKKGDK-YIINGSKTFITNGVYSDYLVVAAKTAPELGNKGM 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + D G+ +L NK+G R++ T E+ F N ++ E+ K Y+ Sbjct: 181 SMFVIDRDTKGVSATKL-NKLGWRASDTGEIAFDNV------EIPAENLMGEEGKGFPYI 233 Query: 319 ------DSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + IM ++ +L A+ Y + R G + ++ IA ++ A Sbjct: 234 MQHFASERLIMGINAHARAEFALEYAMDYMKEREAFGRSIDKFQALRHIIAQRVSEVEMA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 ++ ++ E + +EA+ +++++ K+A I + ++ +GG GYIEE Sbjct: 294 KTFNYTVSKRLSENEYVVKEASMSKLLS-------TKIADETIYDCLQMLGGYGYIEEYP 346 Query: 430 IARHYRESPANSILLGSGNAMVL 452 +AR R+S I G G + +L Sbjct: 347 MARLLRDSRLGPI--GGGTSQIL 367 >gi|115523097|ref|YP_780008.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517044|gb|ABJ05028.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris BisA53] Length = 593 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 90/403 (22%), Positives = 170/403 (42%), Gaps = 63/403 (15%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 KV P W +R I G + +F A ++ A + G + P Sbjct: 70 KVLTAPGWPDAYQRWIAAGWNAVSGAEAFGGQGLPMAINAACTEIWAAANVAFG--LCPL 127 Query: 156 VTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T +++ AL + + K + K+ S E+ T MQ LTE + G+D+ A Sbjct: 128 LTLSAIEALDAHGSEELKKIYLEKLISGEWPGT----MQ---------LTEPQAGSDVGA 174 Query: 214 ITSQGQKISDGIYCLSGHKWFLS---SPMSDAFI--MLAQVEGR------VGCFLVPRLL 262 + ++ ++ DG Y + G K F++ M+D + +LA++ + FL+P+ L Sbjct: 175 LRARAERADDGSYRIFGTKIFITYGDHDMTDNIVHFVLARLPDAPPGTKGISLFLIPKFL 234 Query: 263 ED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK- 313 + G+ N + +++K+G + T + + G+L+G+ N M+ Sbjct: 235 VNADGSLGARNDIFPSGIEHKLGMHAAPTCTMTMGDNAGAIGYLIGEEN------RGMQC 288 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI---------LIDQPVMKRAI 359 + ++ A +SV V +AE A+ +A+ R I +I P +KR + Sbjct: 289 MFTMMNQARLSVGLEGVGIAERAYQQALAFAQERKQGRAIGEKPAKSDPIIVHPDVKRML 348 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSE------EAAYARIMAPITKYWCCKMAPAVIA 413 + AAA + + A + D + S+ A A ++ PI K + + V Sbjct: 349 LQMRSMTAAARTICYATAVALDISLRASDPAVKAAAATRAALLTPIAKAFATDIGNEVAY 408 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+IEE A+H R++ I G+ +D++ Sbjct: 409 LGVQIHGGMGFIEETGAAQHLRDARITPIYEGTNGIQAIDLVT 451 >gi|156552988|ref|XP_001604014.1| PREDICTED: similar to GA17761-PA [Nasonia vitripennis] Length = 475 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 20/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A E G + Sbjct: 218 LTEPGAGSDAFSLKTVAKK--DGSDYVINGSKCWISNSDIAGVFLVFANAEPSKGYRGIT 275 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318 + G+ + ++K+G R++ T + F N + + N+ K +L Sbjct: 276 TFFVERDTPGVTVAKPEDKLGIRASGTCMIHFENV---RVPETNICGQFGHGYKYAAGFL 332 Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + + +A+ I Y R G + + ++ IA I +++ AA L Sbjct: 333 NEGRIGIGAQMIGIAQGSLDATIPYTLERKQFGKSIYEFQSLQHQIAQIVVEVEAARLLV 392 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D K +EAA A KY+ ++A V ++ ++ +GG G+ + + Sbjct: 393 YNAARLVDAKKDVMKEAAMA-------KYYASEIAQRVTSKCVDFMGGVGFTTDYPQEKF 445 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 YR++ +I G+ N + + ++K Sbjct: 446 YRDAKIGTIYEGTSNMQLSTIAKAIKK 472 >gi|156740601|ref|YP_001430730.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231929|gb|ABU56712.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 379 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + + L+E G+D AA + + D Y ++G K W + +D I++A Sbjct: 113 PLAEGRMLGAFSLSEPGAGSDAAAQKTTAARDGD-YYVINGIKNWVTNGDYADTIILMAM 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + L D G ++++K+G RS + ++ + N + L Sbjct: 172 TDPGKGHRGITAFLVDPREPGCSIVKVEHKLGIRSAHSCQMAYDN---YRLPAWRRLGEE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + L++ + ++ V +A+ A+ YA+ R G +I+ + +AD+ Sbjct: 229 GQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A I AA L++ A D+ A+ A++ A T W +A++ G + Sbjct: 289 ATRIKAARLLTYEAAWRKDQHLDFVSAASMAKLYASETAMWTA-------TKAVQVFGSN 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY +E + R++R++ I G+ Sbjct: 342 GYSKEYPVERYFRDAKITEIYEGT 365 >gi|187919735|ref|YP_001888766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718173|gb|ACD19396.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 601 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 40/319 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR-- 252 + LTE + G+ ++ + + +DG Y + G+K F+S +S+ + +LA++ G Sbjct: 163 MALTEPQAGSSLSDLVTSATPNADGTYSIRGNKIFISGGDHELSENIVHLVLARIPGGPP 222 Query: 253 ----VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F VP+ EDGS N + L +K+G R + L F G L+G Sbjct: 223 GVKGISLFTVPKFHVNEDGSLGARNDVALAGLIHKMGWRGTTSTMLSFGEHGECIGELVG 282 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------IL 349 + L + + +I + L + ++ G SL A + R L Sbjct: 283 EPHHGLAYMFHMMNEARIGVGLGAVMLGYRGYLASLDYARERPQGRRPDNKNPLDPQLPL 342 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS------RSEEAAYARIMAPITKYW 403 I+ ++R + + A AL A DE + R+E ++ P+ K W Sbjct: 343 IEHADVRRMLLAQKAYVEGAYALCLYAARLVDEQNTGESETVRAEAGLLLDLLTPVVKSW 402 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460 + + A++ GG GY E + + YR++ N I G+ +D+L +++ Sbjct: 403 PSQWCLEANSLAIQIHGGYGYTREYPVEQFYRDNRLNMIHEGTHGIQAIDLLGRKVTMKQ 462 Query: 461 GTNLFEQLFSTLEQDLGSS 479 G L +QL ++Q +G++ Sbjct: 463 GAAL-KQLAREIQQTIGTA 480 >gi|34497539|ref|NP_901754.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34103394|gb|AAQ59756.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 386 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 45/308 (14%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+A + ++ + W PK+ + E V LTE G+D A++ ++ +K Sbjct: 96 MIASFGSKQLAEQWVPKMVTGE-------------VLGSYCLTEPGAGSDAASLKTRAEK 142 Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRL 275 + +Y L+G K F+S S +++A+ G + F+VP G+ Y + Sbjct: 143 KGE-VYVLNGGKMFISGAGSTQVLVVMARTGGPGPKGISAFVVP-----ADAPGVSYGKK 196 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVS 331 + K+G S T + F N ++ V+ E+ + + LD ++++ V Sbjct: 197 EKKMGWNSQPTRAITFDNV------EIPVANRLGEEGQGFAFAMKGLDGGRINIATCAVG 250 Query: 332 LAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 A+A A +R+V G L + ++ +AD+ ++ AA + A D A Sbjct: 251 TAQAALNAAQRYVQERQQFGHPLAELQTVQFRLADMLTELVAARQMVRLAAWKLDNA--- 307 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A A + K ++ + A++ GG GY+++ + RH R+ + IL G+ Sbjct: 308 ---SADATAYCAMAKRLATDLSFNIANNALQLFGGYGYLQDFPLERHVRDLRVHQILEGT 364 Query: 447 GNAMVLDV 454 M + V Sbjct: 365 NEVMRMIV 372 >gi|120556229|ref|YP_960580.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326078|gb|ABM20393.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 393 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ +K+ G Y L+G K W + Sbjct: 115 FGNEETRQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVEGG-YRLTGSKMWITN 173 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ +G + F++ + E GL + K+G R++ T E+ F Sbjct: 174 SPIADVFVVWAKDDDGAIRGFVLEKGWE-----GLSAPAIHGKVGLRASITGEIVMDGVF 228 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA +S + AE A Y R G Sbjct: 229 VPEENAFPNVRGLKGP------FTCLNSARYGISWGALGAAEDCWHTARQYVLDRQQFGR 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I+ A RL DE + E + I K C Sbjct: 283 PLAANQLIQKKLADMQTEISLALQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGK 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A V A + +GG+G +E +ARH Sbjct: 336 ALDVARLARDMLGGNGISDEFGVARH 361 >gi|307103035|gb|EFN51300.1| hypothetical protein CHLNCDRAFT_56404 [Chlorella variabilis] Length = 429 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 22/269 (8%) Query: 202 LTEKRGGTDIAAITSQGQKI-SDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259 LTE G+D +A+ ++ + G Y L+G K F+S +SD ++++A+ G G + Sbjct: 169 LTEPSAGSDASALKMTARREGASGDYILNGAKAFISGGGVSDVYLVMART-GEPGPKGIS 227 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312 L + GL + + ++K+G + T + F N G ++ ++ Sbjct: 228 AFLVEKGTKGLSFGKPESKLGWNAQPTTAVMFDDVRVPSKNRVGQEGEGFKLAMKALDGG 287 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I S+ G + L A Y + R GG + + +AD+A I A+ + Sbjct: 288 RINI----GACSIGGAQFCLDTAREYTQARQAFGGPISQFQATQFRVADMATSIQASRLM 343 Query: 373 SFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A + D + + + E A A+ A Y V +A++ +GG GY++E I Sbjct: 344 VRHAAAALDAHSPTATMECAMAKRFATDACY-------RVTDDALQLLGGYGYLKEYPIE 396 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R+ R+ + IL G+ M + + L+K Sbjct: 397 RYMRDLRVHCILEGTNEVMRIIINRELDK 425 >gi|257094593|ref|YP_003168234.1| acyl-CoA dehydrogenase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047117|gb|ACV36305.1| acyl-CoA dehydrogenase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 389 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++ ++ +DG Y LSG K W +SP++D F++ A+ + GR+ F Sbjct: 134 FGLTEPNHGSDPGSMLARAHP-ADGGYRLSGTKTWISNSPIADLFVVWAKNDAGRIRGF- 191 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 LLE G P GL + K+G R++ T E+ + F +L ++G Sbjct: 192 ---LLEKGMP-GLSTPIIHGKMGLRASITGEIVMDDVFVPADNELPGASGLKGPFAC--- 244 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATAL 372 LD+A ++ + AE RR+V G L ++++ +AD+ +I Sbjct: 245 LDAARYGIAWGALGAAEDCWLRARRYVLDRQQFGRPLAANQLIQKKLADMQTEITLGLQG 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 RL DE K+ E + + K C A + A + GG+G +E + R Sbjct: 305 CLRLGRLKDEGKAAPE-------ITSLMKRNSCGKALEIARLARDMHGGNGIADEYGVIR 357 Query: 433 H 433 H Sbjct: 358 H 358 >gi|150016905|ref|YP_001309159.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149903370|gb|ABR34203.1| acyl-CoA dehydrogenase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 379 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254 GLTE GTD A Q + +G Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V +L G +L+NK+G R+++T EL N ++ N+ + + Sbjct: 181 ISAFIVEKLFP-----GFSIGKLENKMGIRASSTTELVMENC---IVPKENLLSKEGKGF 232 Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 I + LD + ++ + +A EA++Y + R G L ++ IA++ + I Sbjct: 233 GIAMKTLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFGKPLSAFQGLQWYIAEMDVKI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A + S +AA A++ A +A V +A++ GG GY + Sbjct: 293 QAAKYLVYLAATKKQAGEPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 346 EYPVERMMRDAKICEIYEGT 365 >gi|325122359|gb|ADY81882.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 607 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 69/365 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283 Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYAR------ 340 + G L+G+ + M +I + L +A + +G A+ YA+ Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTRLQGR 339 Query: 341 ----RRHVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSEE 389 R S I LI ++R + ++ A AL A +S ++A+ R++ Sbjct: 340 SRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQRNQA 399 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 400 HQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFGI 459 Query: 450 MVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 LD+L L +G + L ++ +T+EQ L+D + L R Sbjct: 460 QALDLLGRKTRLNQGLSMKLLHAKIMNTIEQ------ANAEPSLKDHADQLDQKWQLIRN 513 Query: 504 LTEKI 508 +TEK+ Sbjct: 514 VTEKL 518 >gi|126665121|ref|ZP_01736104.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17] gi|126630491|gb|EBA01106.1| Acyl-CoA dehydrogenase-like protein [Marinobacter sp. ELB17] Length = 591 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 44/309 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE + GTD+ I ++ +DG Y + G K +++ D ++LA++ G Sbjct: 165 LTEPQCGTDLGLIRTRATPNADGSYAIEGTKIWITGGEHDLTDNIVHLVLAKLPGAPDTT 224 Query: 253 --VGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + F+VP++L E G N L++K+G + +AT + F G+L+G+ P Sbjct: 225 KGISLFVVPKVLPESGERNPAFCGGLEHKMGIKGSATCVMNFEGAKGWLVGE------PN 278 Query: 310 EDMKILIYLDSAIMSVSGMR------VSLAEAIHYARR----RHVSG--------GILID 351 + M+ + + + + GM+ ++ E++ +AR R +SG +I Sbjct: 279 DGMRAMFTMMNEARLMVGMQGLGLAEMAYQESLGFARERLQGRSMSGVKNPDGPADPIIV 338 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA------YARIMAPITKYWCC 405 P ++R + + A++ + D + + +EA +++ P+ K + Sbjct: 339 HPDVRRMLMRQKVLNEGMRAMALFAGHQLDLSVAHPDEAVRESADDLVQLLTPVVKAFLT 398 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--LLEKGTN 463 ++ +GGSG+ + + + R+ I G+ LD++ L KG Sbjct: 399 DEGSNNTNIGLQVLGGSGFTTDWPLEQLVRDGRIARIYEGTNGIQALDLVGRKLSLKGGR 458 Query: 464 LFEQLFSTL 472 L LF L Sbjct: 459 LVRTLFGVL 467 >gi|309360182|emb|CAP31581.2| hypothetical protein CBG_12633 [Caenorhabditis briggsae AF16] Length = 418 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 33/278 (11%) Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252 S AIG L+E G+D A+ + +K D + +SG K W ++ + F++ A + Sbjct: 154 SEAIGSFALSETGSGSDAFALKTTAKKDGDD-FVISGSKMWITNAGHAQFFLVFANADPS 212 Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 G CFLV R E G+ + ++K+G R + L+ + +S Sbjct: 213 KGYKGITCFLVDRNQE-----GVSVGKKEDKLGIRL-------LRHALSTLITYVCISRP 260 Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 E K I L++ + + + LA+ I Y ++R G LID M+ I Sbjct: 261 FSERYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQ 320 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + ++I AA L + A + EAA A++ A ++A ++ +E +GG Sbjct: 321 VRMEIEAARLLVYNAARMKENGLPFVREAAMAKLFA-------SQVATTATSKCVEWLGG 373 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 G+ +E + + YR+S +I G+ N + + L++ Sbjct: 374 VGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVD 411 >gi|254517613|ref|ZP_05129669.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA] gi|226911362|gb|EEH96563.1| butyryl-CoA dehydrogenase [Clostridium sp. 7_2_43FAA] Length = 379 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 33/270 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ ++D FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTVAVLDGDNYILNGSKIFITNGGVADTFIIFAMTDRSKGTRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G + + K+G R+++T EL SN L+G G MK Sbjct: 181 ISAFIVEKEFEGFSIGKKEEKLGIRASSTTELVMSNCIVPKENLIGQEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D + ++ + +AE A+ Y + R G L ++ IA++ I AA Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVAYMKERKQFGKPLAAFQGLQWMIAEMDTKIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A D S +AA A++ + ++A V +A++ GG GY +E Sbjct: 296 RHLVYKAAWLKDNKLPYSVDAARAKL-------YAAEVAMDVTTKAVQIFGGYGYTKEYP 348 Query: 430 IARHYRESPANSILLG---------SGNAM 450 + R R++ I G SGNA+ Sbjct: 349 VERMMRDAKITEIYEGTSEVQKMVISGNAL 378 >gi|196014205|ref|XP_002116962.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens] gi|190580453|gb|EDV20536.1| hypothetical protein TRIADDRAFT_31757 [Trichoplax adhaerens] Length = 609 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 32/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR------- 252 LTE G+D A++ ++ DG Y L+G+K W + +D + A+V R Sbjct: 184 LTEPMAGSDAASLRTKAVLDDDGKHYILNGNKIWITNGGFADIMTVFARVVRRKEDSDET 243 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 + F+V R G+ + K+G +S+ T + F N ++G V Sbjct: 244 TEGITAFIVERDFP-----GVTSGPAEKKMGLKSSNTASIYFDNVKVPVENMIG--KVGE 296 Query: 307 GPVEDMKILIYLDSAIMSVSG--MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M IL +++VS +R+ +++ +A R LI+ V++ +A +A+ Sbjct: 297 GFKVAMNILNNGRFGLIAVSSGLIRMLVSKTSEHANNRIQFNQKLIEFQVVQEKLAKMAM 356 Query: 365 DIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A ++++ L N+ D + + EA+ ++I A + CC E ++ +GG+G Sbjct: 357 AHYAVESIAYILCNNMDRGITNFQLEASMSKIFATEAAWHCCD-------ECIQVLGGNG 409 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ + I RH R+ I G+ + + Sbjct: 410 YMRDNEIERHLRDIRVYRIFEGANDTL 436 >gi|260203941|ref|ZP_05771432.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85] gi|289573370|ref|ZP_06453597.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85] gi|289537801|gb|EFD42379.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis K85] Length = 390 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ + V LTE G+D A++++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139 Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272 + G Y L G K F+S + SD ++++A+ EG G + ++E G+P GL + Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFIVEKGTP-GLSF 196 Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315 + K+G + T ++ FG + LN Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPSEAMLGGADGEGAGFGIAMSGLNGGR--------- 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ G + + +A Y R R GG L+D+P ++ +AD+A + + L +R Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A++ D+ + E + + K + V +A++ GG GY+ E + + R Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 360 DLRVHRILEGTNEIMRL 376 >gi|227536690|ref|ZP_03966739.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227243491|gb|EEI93506.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 383 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 65/290 (22%), Positives = 133/290 (45%), Gaps = 19/290 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F+ E P T+ IG GLTE G+D +T+ ++ D + L+G K F++ Sbjct: 101 FANEEQKKKYLPKLATAEWIGAWGLTETGSGSDAGGLTTVAERDGD-YFILNGSKNFITH 159 Query: 238 PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +S ++ G+ G + ++E G+P G + +NK+G R++ T L F N Sbjct: 160 AISSEVAVVITRTGQKGDKKGMTAFIIEKGTP-GFSAGKKENKLGMRASETACLFFDNC- 217 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + D V ++ L LD +S++ + + +A A+ YA R + Sbjct: 218 -RVHKDQIVGEEGQGFVQALKLLDGGRISIAALSLGIARGAYECALKYANEREQFNQKIF 276 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 D + +A++A + AA L+ R A E+ ++S + ++ + K + + A Sbjct: 277 DFQAVGFKLAEMATQVEAAELLT-RQAAFLKESGTKSSK------ISAMAKLYASEAAVE 329 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V E+++ GG G+ ++ +++R++ +I G+ + + + ++K Sbjct: 330 VSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTSSIQKMVIAREIQK 379 >gi|300870342|ref|YP_003785213.1| short-chain specific acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000] gi|300688041|gb|ADK30712.1| acyl-CoA dehydrogenase, short-chain specific [Brachyspira pilosicoli 95/1000] Length = 641 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 19/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ K GLTE G+D A T ++ Y L+G K F++ +P +D +++ A Sbjct: 114 PLAKGEKIGAFGLTEPEAGSD-AGGTETTAVLNGDHYILNGEKIFITNAPKADTYVVFAV 172 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G + NK+G RS++T +L FS+ + N+ Sbjct: 173 TTPGIGTKGISAFIVEKGWEGFEFGEHYNKLGIRSSSTAQLLFSDV---KVPKENLLGKE 229 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD + ++ + +A+ A+ YA+ R G + Q + ++D+ Sbjct: 230 GQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAALEYAKDRIQFGRPIAQQQAIAFKLSDM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L + A ++ + EAA A K + + V+ +A++ GG+ Sbjct: 290 ATKLRAARLLVYSAAYLKEKHEPYGMEAAMA-------KQYASDIGLEVVNDALQIHGGN 342 Query: 423 GYIE-ERSIARHYRESPANSILLGS 446 GYI+ + R YR++ +I G+ Sbjct: 343 GYIKGAYMVERAYRDAKICTIYEGT 367 >gi|254475092|ref|ZP_05088478.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11] gi|214029335|gb|EEB70170.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. R11] Length = 386 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 32/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-FRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + G + +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEMKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENILGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ + E + Y + R G + + +M+ IAD+ + A Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYMKERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426 A + +A + D+ ++AA CC A V +A++ GG+GY+ Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLN 350 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 + + R +R+ A + +G+G + + +L Sbjct: 351 DNPVGRIFRD--AKLMEIGAGTSEIRRML 377 >gi|15607892|ref|NP_215266.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium tuberculosis H37Rv] gi|15840166|ref|NP_335203.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|148660528|ref|YP_001282051.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra] gi|148821957|ref|YP_001286711.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11] gi|167968853|ref|ZP_02551130.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis H37Ra] gi|215410317|ref|ZP_03419125.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 94_M4241A] gi|215426005|ref|ZP_03423924.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92] gi|215429601|ref|ZP_03427520.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054] gi|215444884|ref|ZP_03431636.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85] gi|219556612|ref|ZP_03535688.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17] gi|253797697|ref|YP_003030698.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435] gi|254231066|ref|ZP_04924393.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C] gi|254363693|ref|ZP_04979739.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str. Haarlem] gi|254549718|ref|ZP_05140165.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185644|ref|ZP_05763118.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A] gi|260199766|ref|ZP_05767257.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46] gi|289442154|ref|ZP_06431898.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46] gi|289446316|ref|ZP_06436060.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A] gi|289553009|ref|ZP_06442219.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605] gi|289568703|ref|ZP_06448930.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17] gi|289749261|ref|ZP_06508639.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92] gi|289752800|ref|ZP_06512178.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054] gi|289756839|ref|ZP_06516217.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85] gi|294993210|ref|ZP_06798901.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 210] gi|297633260|ref|ZP_06951040.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207] gi|297730243|ref|ZP_06959361.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN R506] gi|298524241|ref|ZP_07011650.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|306774869|ref|ZP_07413206.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001] gi|306781400|ref|ZP_07419737.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002] gi|306783411|ref|ZP_07421733.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003] gi|306787782|ref|ZP_07426104.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004] gi|306792155|ref|ZP_07430457.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005] gi|306796516|ref|ZP_07434818.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006] gi|306802376|ref|ZP_07439044.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008] gi|306806584|ref|ZP_07443252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007] gi|306966780|ref|ZP_07479441.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009] gi|306970974|ref|ZP_07483635.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010] gi|307078705|ref|ZP_07487875.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011] gi|307083265|ref|ZP_07492378.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012] gi|313657568|ref|ZP_07814448.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN V2475] gi|2911026|emb|CAA17519.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE9 [Mycobacterium tuberculosis H37Rv] gi|13880319|gb|AAK45017.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|124600125|gb|EAY59135.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis C] gi|134149207|gb|EBA41252.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis str. Haarlem] gi|148504680|gb|ABQ72489.1| acyl-CoA dehydrogenase FadE9 [Mycobacterium tuberculosis H37Ra] gi|148720484|gb|ABR05109.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis F11] gi|253319200|gb|ACT23803.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 1435] gi|289415073|gb|EFD12313.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T46] gi|289419274|gb|EFD16475.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CPHL_A] gi|289437641|gb|EFD20134.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 605] gi|289542457|gb|EFD46105.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T17] gi|289689848|gb|EFD57277.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T92] gi|289693387|gb|EFD60816.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis EAS054] gi|289712403|gb|EFD76415.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis T85] gi|298494035|gb|EFI29329.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|308216535|gb|EFO75934.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu001] gi|308325849|gb|EFP14700.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu002] gi|308331745|gb|EFP20596.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu003] gi|308335533|gb|EFP24384.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu004] gi|308339301|gb|EFP28152.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu005] gi|308343014|gb|EFP31865.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu006] gi|308346899|gb|EFP35750.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu007] gi|308350839|gb|EFP39690.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu008] gi|308355477|gb|EFP44328.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu009] gi|308359430|gb|EFP48281.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu010] gi|308363337|gb|EFP52188.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu011] gi|308367032|gb|EFP55883.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis SUMu012] gi|323720782|gb|EGB29852.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis CDC1551A] gi|326905027|gb|EGE51960.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis W-148] gi|328457476|gb|AEB02899.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis KZN 4207] Length = 390 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ + V LTE G+D A++++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139 Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272 + G Y L G K F+S + SD ++++A+ EG G + ++E G+P GL + Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFIVEKGTP-GLSF 196 Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315 + K+G + T ++ FG + LN Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR--------- 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ G + + +A Y R R GG L+D+P ++ +AD+A + + L +R Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A++ D+ + E + + K + V +A++ GG GY+ E + + R Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 360 DLRVHRILEGTNEIMRL 376 >gi|293603106|ref|ZP_06685540.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292818500|gb|EFF77547.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 382 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255 LTE G+D A+ ++ D Y L+G K +++ +P++ F ++A+ E R + C Sbjct: 124 LTEPDAGSDAMALRLSAERDGDS-YVLNGTKRYITNAPIAGLFSVMARTAPERRANSISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV E G+P GL + K+G T ++ F N LLG G M Sbjct: 183 FLV----EAGTP-GLIIGKPDKKMGQAGALTSDVVFDNCRVPASALLGG-EEGNGFRTSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + +S + V +AE A+ YA R G + + +++ IAD ++ Sbjct: 237 RVL---DKGRLHISALCVGIAERLLSDAVKYALERKQFGQPIAEFQLIQAMIADSQAELY 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + A D ++ + +AA K + +M V A++ GG+GY+ E Sbjct: 294 AARCMVLDAARMRDRGENTTMQAA-------CCKLYSTEMVGRVADRAVQIHGGAGYMSE 346 Query: 428 RSIARHYRE 436 ++ R YR+ Sbjct: 347 YAVERFYRD 355 >gi|194016433|ref|ZP_03055047.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061] gi|194011906|gb|EDW21474.1| acyl-CoA dehydrogenase [Bacillus pumilus ATCC 7061] Length = 380 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D + + K + Y L+G K F+++ ++D +I+ A + Sbjct: 125 LTESGSGSDAGGMKTTAVK-AGSEYVLNGAKIFITNGGIADYYIVFAVTDQEATSRNTTA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + + G + ++K+G RS+ T E+ F + + + N E KI ++ LD Sbjct: 184 FIVEKETPGFSVGKKESKLGIRSSPTTEIRFEDC---RIHERNRLGQEGEGFKIAMMTLD 240 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 ++ V +A+ A+ YA+ R G +I + +AD+A I A+ L++ Sbjct: 241 GGRNGIAAQAVGIAQGALDAAVDYAKERKQFGKPIIQHQGIAFKLADMATAIEASRLLTY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A +A +E+A +++ A T A V EA++ GG GY ++ + R+ Sbjct: 301 QAAWLETKALPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGYGYTKDYPVERYM 353 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 354 RDAKITQIYEGT 365 >gi|127513498|ref|YP_001094695.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella loihica PV-4] gi|126638793|gb|ABO24436.1| isovaleryl-CoA dehydrogenase [Shewanella loihica PV-4] Length = 389 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P +D +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLSARKEGD-RYILNGNKMWITNGPDADTYVIYAKTDMDKGPHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDC---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|297616671|ref|YP_003701830.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144508|gb|ADI01265.1| acyl-CoA dehydrogenase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 606 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 86/382 (22%), Positives = 161/382 (42%), Gaps = 57/382 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 + +A ++ R+ + PK+F + T + LTE G+D+ I Sbjct: 131 TTGAAGLIESFGDERLKNMFLPKMFDGSWSGT-------------MCLTEPSAGSDVGDI 177 Query: 215 TSQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLL 262 S+ + IY + G+K F++ + + LA+++G + F+VP+ Sbjct: 178 LSKAYPTDNPRIYKIRGNKIFITGGDGNHVENVVHLFLARIDGAASGTKGLSLFVVPKYW 237 Query: 263 --EDGS--PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 EDGS PN + +++K+G ++TV L F G+LLG N TG + + + Sbjct: 238 VNEDGSLEPNDVKAVGVEHKMGLEGSSTVALAFGENDGCRGWLLGSYNAETGEGQGIAQM 297 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSG-------GILIDQPVMKRAIADI 362 L + I +++ + A Y + R + G +I+ ++R + Sbjct: 298 FQMMNEERLTTGIFALALAANAYWNAAEYCKER-IQGRNQQGERTAIINHEDVRRMLLLN 356 Query: 363 ALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 A A+ + + D AK R AA + P+ K + A +IAE++ Sbjct: 357 KATSEACRAIIMKTSYYMDVAKHDMDNGRRKAAAAMVDCLIPLAKAYPSDEAWTLIAESI 416 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL---LEKGTNLFEQLFSTLE 473 + GG GY EE +A+ R+ SI G+ +D++ L KG+ +F ++E Sbjct: 417 QAHGGYGYCEEYPVAQAARDCKVLSIWEGTNFIQGMDLVGRKWNLGKGS-VFNAFLKSIE 475 Query: 474 QDLGSSGKKVITILRDSISLCK 495 D + K T+ ++ +L + Sbjct: 476 -DFIEANKTEETLKKELANLAR 496 >gi|138894126|ref|YP_001124579.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|134265639|gb|ABO65834.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] Length = 398 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+A+I + + D Y L+G K W + ++D F++ A + + Sbjct: 123 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R + G + +K K+G RS T EL F N + N+ E K Sbjct: 182 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 233 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ +V+ V L A + Y R G + ++++ IA + + Sbjct: 234 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L +++ +E + + E + A+ +A C A +A++ G GY E Sbjct: 294 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNE 346 Query: 428 RSIARHYRESPANSILLGS 446 + R+ R S A I G+ Sbjct: 347 YPVERYLRNSKAPVIYEGT 365 >gi|87198153|ref|YP_495410.1| acyl-CoA dehydrogenase-like [Novosphingobium aromaticivorans DSM 12444] gi|87133834|gb|ABD24576.1| acyl-CoA dehydrogenase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 572 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 56/321 (17%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI----YCLS 229 + PK+ S E+ T + LTE + G+D+ A+ S I++G Y ++ Sbjct: 148 YLPKLISGEWSGT-------------MNLTEPQAGSDVGALRSTATPITEGPHAGKYRIA 194 Query: 230 GHKWFLSSPMSDA-----FIMLAQVEGR------VGCFLVPR--LLEDGS---PNGLCYQ 273 G K F++ DA ++LA+ G + F+VP+ + +DGS N + Sbjct: 195 GTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVEQDGSLGARNDVRCV 254 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +++K+G ++ T + + + G ++G N G + M ++SA ++V V Sbjct: 255 SIEHKLGIHASPTCVMSYGDNGECIGEMVGHEN---GGLRAM--FTMMNSARINVGSQGV 309 Query: 331 SLAE-----AIHYARRRHVS---GG------ILIDQPVMKRAIADIALDIAAATALSFRL 376 +AE A YAR R S G +I+ P ++R + + + AL + Sbjct: 310 QIAERAFQQARTYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGSRALLYYT 369 Query: 377 ANSFDEAKSRSEEAAY-ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A D +E A A ++ P+ K W + V + ++ GG G+IEE A+H R Sbjct: 370 AGQVDRGALGNEAAQKRAELLVPMLKAWGTDIGCEVASLGIQVHGGMGFIEETGAAQHLR 429 Query: 436 ESPANSILLGSGNAMVLDVLN 456 +S I G+ D++ Sbjct: 430 DSRIAPIYEGTNGIQAADLVT 450 >gi|14324885|dbj|BAB59811.1| acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] Length = 420 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 16/262 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGR-------V 253 +TE GG+D+ + Y L+G K F+ +D F+ A + + Sbjct: 126 ITEPSGGSDLFGMMKTTAVKKGNKYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGI 185 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+V R +P GL + L +GN+ T + + + L+G+LN Sbjct: 186 SAFIVDR----DTP-GLKVETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFN 240 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M I L +A S+ +L A YA +R G LI+ + +A+ + +A+ Sbjct: 241 RMMIPERLTTAAGSLGVSTAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSAS 300 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL + A + D + +YAR + + K + ++ +AM+ +GG GY I Sbjct: 301 ALVYTAAKAADLYEKGQTTQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPI 360 Query: 431 ARHYRESPANSILLGSGNAMVL 452 R R+S I GS M + Sbjct: 361 ERLLRDSRLGLIWTGSSEVMKM 382 >gi|282865002|ref|ZP_06274055.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] gi|282559925|gb|EFB65474.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] Length = 385 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251 + +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTDAPRPDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L L+ D G R +K+G + + T EL F D+ V PVED Sbjct: 184 RHGISL---LVVDTKSEGYSVGRKLDKLGLKVSDTAELSFV--------DVKV---PVED 229 Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + K YL A+ + + ++ A Y + R V G + K Sbjct: 230 LLGEENKGFSYLGQNLPQERLGIAVGAYAQASAAVRFAQQYTQDRTVFGKTVASFQNTKF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A ++ AA A+ R + D + EAA A++ +C ++A VI ++ Sbjct: 290 ELAACKAEVDAAEAVCDRAIEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 343 LHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375 >gi|120405159|ref|YP_954988.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957977|gb|ABM14982.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 382 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 20/265 (7%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-- 251 +V + +TE G+D+A + + + D Y ++G K F++ M +D I++A+ Sbjct: 119 TVLTAIAMTEPGTGSDLAGMRTTAVRDGDD-YIVNGAKTFITGGMQADLVIVVARTSTDP 177 Query: 252 ---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 R G L+ ++EDG +G R K+G + T EL F + +LG+++ + Sbjct: 178 DNRRKGLTLL--VVEDGM-DGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEA 234 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 G + L A+ SV+ R ++A AI Y + R G + K +A + + Sbjct: 235 FGYLGHNLAQERLTVAVGSVAQARSAIAAAIEYTQSRKAFGTPVASFQNTKFELAACSTE 294 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA A+ D A S E + A TK +C +M V+ ++ GG GY+ Sbjct: 295 VEAAQAM-------LDRAVSLHVEGELSGADAARTKLFCTEMQQRVVDRCLQLFGGYGYM 347 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E IAR Y ++ I G+ M Sbjct: 348 MEYPIARLYTDARVARIYAGTSEVM 372 >gi|33600412|ref|NP_887972.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33568011|emb|CAE31924.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 418 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 GLTE G+D + ++ K DG Y L+G+K W +SP++D F++ A+ +G++ Sbjct: 158 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 F +LE G GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 217 RGF----ILEKGM-KGLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 269 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365 L+SA ++ + AEA H AR+ R G L ++++ +AD+ + Sbjct: 270 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 325 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I RL DE + E + I K C A + A + +GG+G Sbjct: 326 ITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 378 Query: 426 EERSIARH 433 +E +ARH Sbjct: 379 DEFGVARH 386 >gi|327450343|gb|EGE96997.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL013PA2] Length = 382 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDLDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|308447060|ref|XP_003087326.1| hypothetical protein CRE_15258 [Caenorhabditis remanei] gi|308257394|gb|EFP01347.1| hypothetical protein CRE_15258 [Caenorhabditis remanei] Length = 408 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 24/226 (10%) Query: 222 SDGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLV---PRLLEDGSPNGLCYQRLKN 277 ++G + ++G K L +D F++ A +G+ F+V P + SP Sbjct: 197 NNGQFSITGEKTLVLLGATADLFLVSADFKGQADVFVVKRDPSITVKKSP---------- 246 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 +G ++ TV L+F NT LGD + + D+ L++ A+ S ++ +I Sbjct: 247 AMGLKATETVTLKFDNTPAQRLGDEDFNYPAFLDLGNLMWCAMAVGSCEAVK---DYSIK 303 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G + + + IAD+A++I A L A+ + + EA AR++ Sbjct: 304 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGQPFHREAYLARLL- 362 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 C + + + + ++ +GG G+ +E R YR+ A ++L Sbjct: 363 ------CAEKSMKIATDGVQILGGHGFTKEHPAERWYRDLRATAVL 402 >gi|297161117|gb|ADI10829.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 385 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 23/282 (8%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 D+AP + P M + G +TE G+D+A +T ++++DG + LSG K Sbjct: 105 DFAPPDTRKRLLPR----MCSGELIAGNAMTEPESGSDVARLTVTARRVADG-FLLSGTK 159 Query: 233 WFLSS-PMSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 F+S+ P++D F+ A + + G V ++E G+P GL + +K+G S + Sbjct: 160 SFVSNGPVADVFVTYATTDPQAGHLGVTAFVVERGAP-GLAVGQPLDKMGLLSCPAAAVT 218 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKI----LIYLDSAIMSVS-GMRVSLAE-AIHYARRRHV 344 F + F + D V P + I + + S + +V G++ L + + + R+R Sbjct: 219 FDDCF---VPDEQVLGAPGQGGAIFQHSMRWERSCLFAVYLGVQQRLLDRCVEHVRQRRQ 275 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 SG L + + + D+ L + + L +R ++ D + A + ++K Sbjct: 276 SGKRLAEFQSVSNRVVDMKLRLESGRLLLYRACDALD------RDDPDASLWVSLSKLAV 329 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A A +AM+ GG G + E I R++ ++ G+ Sbjct: 330 SEAAVASSLDAMQLFGGRGCLREEGIEAAVRDALPTTVFSGT 371 >gi|260555429|ref|ZP_05827650.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411971|gb|EEX05268.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 383 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V D G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV L ++++YA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A++ A +M V ++ GG+GYI E + Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|229064992|ref|ZP_04200290.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] gi|229170051|ref|ZP_04297742.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|228613398|gb|EEK70532.1| Acyl-CoA dehydrogenase [Bacillus cereus AH621] gi|228716293|gb|EEL68005.1| Acyl-CoA dehydrogenase [Bacillus cereus AH603] Length = 376 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|51230630|ref|NP_001003743.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio rerio] gi|50925422|gb|AAH79521.1| Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain [Danio rerio] Length = 405 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 36/273 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ Q+ + + L+G K W +S + A ++ A + + Sbjct: 145 FALSEPGNGSDAGAASTLAQQEGNE-WVLNGTKAWITNSWDASATVVFATTDKSLKHKGI 203 Query: 254 GCFLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 FLVP P+ GL + ++K+G R+++T + + G +LG+ + Sbjct: 204 SAFLVPM------PHPGLSLGKKEDKLGIRASSTANIILEDCRIPLGNMLGERGMG---- 253 Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIA 363 KI + LDS + ++ + +A+A YA +R G + ++ +AD+A Sbjct: 254 --FKIAMQTLDSGRLGIAAQALGIAQAALDCAADYAHKRTAFGAPIGKLQAIQFKLADMA 311 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I +A L+++ A D K ++EAA A++ A + A +A++ +GG G Sbjct: 312 VAIESARLLTWKAALLRDAKKPFTKEAAMAKLAA-------SEAATFASHQAIQVLGGMG 364 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 Y+ + RHYR++ I G+ L + N Sbjct: 365 YVTDMPAERHYRDARITEIYEGTSEIQRLVIAN 397 >gi|300933733|ref|ZP_07148989.1| acyl-CoA dehydrogenase-like protein [Corynebacterium resistens DSM 45100] Length = 383 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 47/292 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W PK+ S E+ +G + +TE G+D+ +I + ++ D Y ++G K Sbjct: 116 WLPKLASGEF--------------VGAIAMTEPGTGSDLQSIKTTAKRDGDE-YVINGSK 160 Query: 233 WFLSS-PMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 F+++ +D I++ + EG G LV ++E G R+ NKIG + T EL Sbjct: 161 TFITNGSHADLIIVVCRTGEEGHAGISLV--VVETEGLEGFSRGRVLNKIGMKGQDTREL 218 Query: 290 EFSNTFGFLLGDLNVSTGPV--EDMKILIYL---------DSAIMSVSGMRVSLAEAIHY 338 F D+ V + E+ K IYL A+ +++ ++ + I Y Sbjct: 219 FFQ--------DVRVPAENILGEEGKGFIYLMQQLPQERLSIAVGAIAATEAAIQQTIDY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 ++R G +PV K + ++A T + + D R A Sbjct: 271 TKQREAFG-----RPVFK--FQNTRFELAECTTEAMAVRTFVDHCIQRHVAGELDPATAS 323 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 KY +I ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 324 AVKYLATDKQVEIIDRCLQLFGGYGYMLEYPIARAYADARVQKIYGGTNEIM 375 >gi|188588331|ref|YP_001919795.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum E3 str. Alaska E43] gi|251778721|ref|ZP_04821641.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498612|gb|ACD51748.1| butyryl-CoA dehydrogenase [Clostridium botulinum E3 str. Alaska E43] gi|243083036|gb|EES48926.1| butyryl-CoA dehydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 379 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTTAVLDGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + S G +L++K+G R ++T EL + L+G G MK Sbjct: 181 ISAFIVEKSFPGFSIGKLEDKMGIRGSSTTELVMEDCIVPKENLIGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D + ++ + +AE A++Y + R L Q ++ IA++ + I AA Sbjct: 239 L---DGGRIGIAAQALGIAEGAFEEAVNYMKERKQFRRPLSAQQGLQWYIAEMDVKIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A + S +AA A++ A ++A V +A++ GG GY ++ Sbjct: 296 RHLVYKAACKKQNGQPYSVDAARAKLFA-------AEVAMDVTTKAVQIFGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|281204080|gb|EFA78276.1| acyl-CoA dehydrogenase [Polysphondylium pallidum PN500] Length = 824 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 20/259 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A+++++ + D + L+G K F+S SD ++++ + G G + Sbjct: 568 LTEPGSGSDAASLSTKAVRDGDH-FVLNGSKAFISGGGESDVYLVMVRT-GEKGAKGISC 625 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 LL + GL + + + K+G + T + +N G N++ + + Sbjct: 626 LLIEKDTPGLSFGKKEEKLGWNTQPTRAVIMEDCRVPVANLIGKEGQGFNIAMNALNGGR 685 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I S+ G + SL A + + R G L + ++ +AD+A + AA + Sbjct: 686 LNI----GACSLGGAQASLVAARDHLKVRKQFGQPLANFQSIQFKLADMATKLYAARTM- 740 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L NS ++ ++AA MA K + C + EA++ GG GY+++ I R+ Sbjct: 741 --LRNSAKMLDAKDQQAAVYIAMA---KLFTCDTCFEICDEALQLHGGYGYLKDYPIERY 795 Query: 434 YRESPANSILLGSGNAMVL 452 R++ + IL GS M L Sbjct: 796 LRDTRVHRILEGSDAVMRL 814 >gi|225435261|ref|XP_002285017.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 405 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 29/286 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + + PK+ S E+ +G L ++E G+D+ ++ + ++ DG Sbjct: 127 NPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 171 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P++ ++ A+ + + ++E G P Q+L +K+G R Sbjct: 172 YILNGNKMWCTNGPIAQTLVVYAKTDITAHSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 230 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ M+ + + Y R Sbjct: 231 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVR 290 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ +AD+ + ++ + + +A + + K ++ A + A Sbjct: 291 QREQFGRPIGEFQFIQGKLADMYTSLQSSRSYVYSVARNCENGKIDPKDCAGVILCA--- 347 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++C+GG+GY+ E R R++ I G+ Sbjct: 348 ----AERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 389 >gi|86139098|ref|ZP_01057669.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85824329|gb|EAQ44533.1| Acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 385 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 29/284 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ S E + + +TE G+D+ I + ++ Y LSG K Sbjct: 114 WLPKMASGE-------------MVCAIAMTEPSTGSDLQNIKTTA-RLEGNEYVLSGSKT 159 Query: 234 FLSS-PMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+++ +D I++A+ + +G + ++ E G R K+G +S T EL F Sbjct: 160 FITNGQQADLIIVVAKTDTSLGAKGISLMMVETAEAEGFARGRNLEKLGLKSQDTSELFF 219 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 N LLG G + MK L L A+ + M +L E + Y R G Sbjct: 220 DNVRLPPENLLGGTE-GQGFYQLMKSLPQERLVVALGGAAAMEKALEETVAYTSERRAFG 278 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L++ + +A++ A A F D+ ++ A + K+W + Sbjct: 279 KPLLEMQNTRFKLAEV--KTVAHIARVF-----LDDCVAKHLRGELDATTASMAKWWVTQ 331 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 M I E ++ GG GY+ E I+ Y ++ I GS M Sbjct: 332 MQCDTIDECLQLFGGYGYMSEYPISTMYADARVQKIYGGSNEIM 375 >gi|312217731|emb|CBX97678.1| hypothetical protein [Leptosphaeria maculans] Length = 535 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 35/301 (11%) Query: 169 RVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCL 228 R+ K+W PK+ T+ L+E G+D A+ ++ + +G Y + Sbjct: 257 RIKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATRTDNG-YKI 301 Query: 229 SGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 +G K W +S + FI+ A ++ + + + G + + K+G ++++T Sbjct: 302 NGSKMWITNSMEAGFFIVFANLDPSKKYKGITAFIVEKGTKGFSIAKKEKKLGIKASSTC 361 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARR 341 + F + + N+ E K I L+ + ++ LA A YA Sbjct: 362 VINFDDV---EIPKENLLGNEYEGYKYAIALLNEGRIGIAAQMTGLALGAWENAAGYAWN 418 Query: 342 RHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-API 399 G L+ + M+ +A +I AA AL + A R +EA +M A + Sbjct: 419 DRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAA--------RKKEAGEDFVMDAAM 470 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K + ++A V + A+E +GG G++ E +++R+S +I G+ N + + LL+ Sbjct: 471 AKLYSSQVAGRVSSSAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIAKLLQ 530 Query: 460 K 460 K Sbjct: 531 K 531 >gi|329891079|ref|ZP_08269422.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] gi|328846380|gb|EGF95944.1| glutaryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] Length = 396 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 22/240 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE GG+D A++ + + DG Y L+G K W +SP++D I+ A+++G + F+V Sbjct: 142 FGLTEADGGSDPASMKTTAVAV-DGGYRLNGGKYWITNSPIADLAIVWAKLDGVIRGFIV 200 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R +G ++ +K+ R++ T ++ ++ F + + N+ G L Sbjct: 201 ERDF-----DGFTTGKIGDKLSLRASVTGDIGLNDVF---VPEANILPGVQGLRGPFSCL 252 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALS 373 + A ++ + AE +A R +V+ L +P ++++ +AD+ +I + Sbjct: 253 NKARFGIAWGAMGAAEFCFHASRDYVAERTLFGRPLSSRQLVQKKLADMQTEIFLGFEGA 312 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + L D A+ + K C A AV EA + GG+G E + RH Sbjct: 313 YALGRLLD-------TGAWVPEAISLMKRNNCGKALAVAREARDMHGGAGITGELHVMRH 365 >gi|300785738|ref|YP_003766029.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795252|gb|ADJ45627.1| long-chain-acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 380 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 43/299 (14%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TTP + W P S E + + ++E G+D+ + + ++ G Sbjct: 102 LTTPEQRRRWLPGFCSGE-------------IITAIAMSEPGAGSDVRGLRTTARR-EGG 147 Query: 225 IYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 Y + G K F+S+ + +M+A G G L+ +E G+P G R +KIG Sbjct: 148 EYVIDGTKTFISNGLLADLVMVACKTDPAAGHRGISLIA--VEAGTP-GFSRGRKLDKIG 204 Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331 RS T EL F++ L+G+ N + P E + I A+ +V+ + + Sbjct: 205 QRSADTAELIFTDVRVPVDNLIGEENRGFYHLMRNLPKERLGI------AVHAVASAQRA 258 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 + YA R G + V + A+A++ I + + + + +EEAA Sbjct: 259 YEITLAYAGDREAFGQPIGKFQVNRHALAEMRTKIDVMRTYLDQCVLAVNAGELTAEEAA 318 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W + ++ ++ GG GY+ E IAR +R++ + G+ M Sbjct: 319 GA-------KWWTTETQWEILDRCLQLHGGYGYVNEYEIARLWRDARVQRLYGGTTEIM 370 >gi|316933290|ref|YP_004108272.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315601004|gb|ADU43539.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 382 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 22/262 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ ++ G G + L Sbjct: 125 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGGDGPGGISTL 183 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + D GL + + K+G + T + F N LGD + KI + Sbjct: 184 VVDKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 237 Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ S+ G + +L + + Y + R G L + ++ +AD+A ++ AA L Sbjct: 238 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + D + A A + + K + V EA++ GG GY+ E I + Sbjct: 298 LWRAAAALDR------KDANATKLCAMAKRFATDAGFNVANEALQLHGGYGYLAEYGIEK 351 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 352 LVRDLRVHQILEGTNEIMRLIV 373 >gi|297746230|emb|CBI16286.3| unnamed protein product [Vitis vinifera] Length = 404 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 29/286 (10%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 P + + PK+ S E+ +G L ++E G+D+ ++ + ++ DG Sbjct: 126 NPAQKQKYLPKLISGEH--------------VGALAMSEPNAGSDVVSMKCKADRV-DGG 170 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P++ ++ A+ + + ++E G P Q+L +K+G R Sbjct: 171 YILNGNKMWCTNGPIAQTLVVYAKTDITAHSKGITAFIIEKGMPGFSTAQKL-DKLGMRG 229 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYAR 340 + T EL F N F L V M + L+ +++ M+ + + Y R Sbjct: 230 SDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGLMQACIDVVLPYVR 289 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 +R G + + ++ +AD+ + ++ + + +A + + K ++ A + A Sbjct: 290 QREQFGRPIGEFQFIQGKLADMYTSLQSSRSYVYSVARNCENGKIDPKDCAGVILCA--- 346 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V +A++C+GG+GY+ E R R++ I G+ Sbjct: 347 ----AERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGT 388 >gi|229014511|ref|ZP_04171629.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] gi|229136161|ref|ZP_04264914.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|228647320|gb|EEL03402.1| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-ST196] gi|228746861|gb|EEL96746.1| Acyl-CoA dehydrogenase [Bacillus mycoides DSM 2048] Length = 376 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 122 FALTEPNAGSDAGSLKSRAVK-KDDHYIINGSKVFITNGGEASTYIVFASTNPDAGKSGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 181 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 229 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A Sbjct: 230 GFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGLGFKLADMAT 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 290 SVEASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 343 TKDYPVERFFRDAKITQIYEGT 364 >gi|212534366|ref|XP_002147339.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei ATCC 18224] gi|210069738|gb|EEA23828.1| isovaleryl-CoA dehydrogenase IvdA, putative [Penicillium marneffei ATCC 18224] Length = 349 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 31/264 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E + Sbjct: 83 LAMSEHSAGSDVVSMKTTAKAV-DGGWLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 141 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F LLG+LN +K+L Sbjct: 142 SAFIVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFIPKENLLGELN------RGVKVL 195 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R + +++ +AD+ +AA+ Sbjct: 196 MEGLDLERLVLSAGPLGIMQSALDLVLPYTHTRKQFNTPIAHNQLIQGKLADMYTKLAAS 255 Query: 370 TALSFRLANSFDEAKS-------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ A S DE+ + R+++ A A + A C +A++ +GG+ Sbjct: 256 RAYTYATAKSIDESSAAPSGTLIRTQDCAGAILYAAERATECA-------LDAIQLMGGN 308 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI E R R++ I G+ Sbjct: 309 GYINEIPAGRLLRDAKLYEIGAGT 332 >gi|196250644|ref|ZP_03149333.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|196209863|gb|EDY04633.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 399 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+A+I + + D Y L+G K W + ++D F++ A + + Sbjct: 124 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R + G + +K K+G RS T EL F N + N+ E K Sbjct: 183 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ +V+ V L A + Y R G + ++++ IA + + Sbjct: 235 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L +++ +E + + E + A+ +A C A +A++ G GY E Sbjct: 295 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQVHGAYGYSNE 347 Query: 428 RSIARHYRESPANSILLGS 446 + R+ R S A I G+ Sbjct: 348 YPVERYLRNSKAPVIYEGT 366 >gi|194363937|ref|YP_002026547.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194346741|gb|ACF49864.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 397 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 26/242 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE GG+D A++ ++ + D W S P++D I+ AQ E + F Sbjct: 143 FGLTEAHGGSDPASMKTRAVRDGDDWRINGSKMWITSGPVADLAIVWAQTEDGIQGF--- 199 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 +LE G P G Q +K+K+ R++ T L F + L ++ GP L Sbjct: 200 -VLEKGMP-GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGP------LG 251 Query: 317 YLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L A +S + L EA+ YA+ R + G L + +A++A I A Sbjct: 252 CLTQARFGISWGPIGSAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITMAQL 311 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ +L + + + ++ + A K+ C+MA + E + +GG+G E Sbjct: 312 LALQLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHVAI 364 Query: 432 RH 433 RH Sbjct: 365 RH 366 >gi|262278684|ref|ZP_06056469.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259035|gb|EEY77768.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 383 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 16/242 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ + G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTSSDIKGAGGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 183 AFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A +SV L +++ YA R G + + +++ +AD +I AA + Sbjct: 242 KGRLHIAALSVGAATRMLDDSLKYAIERKQFGQPIAEFQLIQAMLADSKAEIYAARCMVL 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D ++ S EA+ A++ A +M V ++ GG+GYI E +I R Y Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|226294512|gb|EEH49932.1| glutaryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb18] Length = 425 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ ++ G Y +SG K W +SP+SD F++ A++E G++ Sbjct: 164 FGLTEPNHGSDPGSMETVAKPHPTKKGYYSISGSKTWITNSPISDYFLVWAKLETTGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F++ R + P +KNK R++ T ++ + + D+ GP Sbjct: 224 GFIIER--DQCPPGTFETPAIKNKTALRASITGMIQMDSCPVPEANMFPDVEGLRGP--- 278 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + I AR R+ G L ++++ +AD D Sbjct: 279 ---FTCLNSARLGIAFGTMGALEDCIDRARSYALERKQFKGNPLAKYQLVQKKLADATTD 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + +++ DE K+ E M + K C A A E GG+ Sbjct: 336 AAYGTLAAIQVSRLKDEGKAAPE-------MISMIKRQNCDKALAGARTLQEIFGGNVAS 388 Query: 426 EERSIARH 433 +E I RH Sbjct: 389 DEYHIGRH 396 >gi|226308382|ref|YP_002768342.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187499|dbj|BAH35603.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 385 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 41/272 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 + +TE G+D+A I + ++ DG Y L+G K F++ + +D +++ + E R Sbjct: 124 IAMTEPGTGSDLAGIKTTAKRSEDGTHYVLNGAKTFITGGVQADRVLVICRTSPPTAENR 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298 + L D S G R KIG R++ T EL F++ FG+L Sbjct: 184 RAGLSI--LAVDTSSEGYEVGRKLEKIGMRTSDTAELSFTDVRVPAEDLLGEEGAAFGYL 241 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +L P E + I + +A + + A A Y R R V G + + K Sbjct: 242 ANNL-----PQERLMIAVTQTAAAVGA----IEFASA--YVRDRKVFGQAVAEFQNTKFV 290 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 IA+ + AA + R + +AA A++ +C + A VI + ++ Sbjct: 291 IAECIAKVEAAQCMVDRALELHETGDLSVADAAKAKL-------FCTETAAEVIDKCLQL 343 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ + I G+ M Sbjct: 344 HGGYGYMLEYPIARLYADTRVSRIYGGTNEVM 375 >gi|167907901|ref|ZP_02495106.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177] Length = 390 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G V Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E M K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|167745562|ref|ZP_02417689.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662] gi|167654874|gb|EDR99003.1| hypothetical protein ANACAC_00253 [Anaerostipes caccae DSM 14662] Length = 383 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 30/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252 GLTE GTD A Q + + DG + L+G K F+++ +D +I++A + GR Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIVIAVTGIIEKRGR 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + +++ G+P G + + K+G R ++T EL F + LLG G Sbjct: 181 KLKEISAFIVDKGTP-GFSFGTKEKKMGIRGSSTYELIFEDCRIPKENLLGKQGKGFGIA 239 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + ++ + LAE + Y + R G + + +AD+A Sbjct: 240 -----MHTLDGGRIGIASQALGLAEGALEATVEYVKERKQFGRTIGQFQNTQFQLADMAT 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L ++ A + K S EAA A++ + ++A V +A++ GG GY Sbjct: 295 KVEAAKLLVYKAAMAKATQKVYSVEAAMAKL-------YAAEVAMEVTTKAVQLHGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 348 IREYDVERMMRDAKITEIYEGT 369 >gi|33598448|ref|NP_886091.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33574577|emb|CAE39224.1| putative acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 389 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D+AA+ + + DG Y L+G K W + ++D + + A+ Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181 Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303 G + + D G+P +R+ + + A + S G Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ M + I+ S + G R +L E + AR R + G L D + + A+ D+ Sbjct: 242 LAM-----MTLDIFRASVAAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296 Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A + A+ L++R A D + R+ EAA A++ A + A AVI A++ GG Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +G + ++ R YRE A I G+ L + L K Sbjct: 350 AGVVAGATVERLYREIRALRIYEGATEVQKLIIARELLK 388 >gi|254428631|ref|ZP_05042338.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196194800|gb|EDX89759.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 395 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 29/285 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D +++++ +K+ DG Y L+G K W +SP++D ++ A Sbjct: 130 PKLATGEWVGCFGLTEPDHGSDPGSMSTRAKKV-DGGYLLNGAKTWITNSPIADVAVVWA 188 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-- 305 ++G++ F+V R + G +++ K R++ T ++ + F L+V Sbjct: 189 NLDGKINGFVVERGFD-----GFSTPKIEGKFSLRASITGQISLDDCFVPEENRLDVEGL 243 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 GP L+ A +S + AE A Y R G L ++++ +A Sbjct: 244 KGPFS------CLNKARYGISWGAMGAAEFCWHAARQYTLDRKQFGRPLAATQLIQKKLA 297 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ +I + +L D E M + K C A + +A + G Sbjct: 298 DMQTEITLGLQGALQLGRLMDAGDWSPE-------MVSLMKRNNCGKAIDIARQARDMHG 350 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 G+G +E + RH A + G+ + L +L + G F Sbjct: 351 GNGISDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 394 >gi|167629177|ref|YP_001679676.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] gi|167591917|gb|ABZ83665.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] Length = 379 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 125/271 (46%), Gaps = 32/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ + GLTE G+D ++ + ++ D Y L G K F+++ +D ++++A Sbjct: 113 PLAEGRSVGAFGLTEPGAGSDAGSLKTIARRDGDD-YILDGTKIFITNGEWADIYVVIAS 171 Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + ++E G+P G + + ++K+G R++ T EL F N + N Sbjct: 172 TDPAKKHRGTTAFIVEKGTP-GFSFGKKEHKMGIRASYTYELIFENC---RIPAENRLGE 227 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVM 355 + KI A+M++ G R+ +A +A+ Y++ R G + + Sbjct: 228 EGQGFKI------AMMTLDGGRIGIAAQALGIAQGAFDQALAYSKTREQFGKPISANQGL 281 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+A I AA L ++ A D S+++A A++ + ++A AV +A Sbjct: 282 QWMLADMATAIEAARLLVYQAAYLKDAGLPYSKQSAMAKL-------YASEVAMAVTTKA 334 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY E + R R++ I G+ Sbjct: 335 VQIHGGYGYTREYPVERMMRDAKITEIYEGT 365 >gi|311106012|ref|YP_003978865.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310760701|gb|ADP16150.1| isobutyryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] Length = 384 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 32/325 (9%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 + PS T+ + M T V +W + P + + S LTE G+D Sbjct: 79 VDPSTTAFLTIHNMATWMVG-NWGQPALREAWGPLLASGQKLASYC----LTEPGAGSDA 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCFLVPRLLEDGS 266 A+++++ Q+ D Y L+G K F+S +D +++A+ G + F VP Sbjct: 134 ASLSTRAQRQGDD-YILNGAKAFISGGGDTDLLVVMARTGGEGAGGISAFAVP-----AD 187 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSV 325 G+ Y R + K+G S +T + F N + N+ E KI + LD +++ Sbjct: 188 SEGIGYGRKEEKMGWNSQSTRPITFENV---RVPAANMLGQEGEGFKIAMKGLDGGRINI 244 Query: 326 SGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V A+ A RR++ L + ++ +AD+A + AA + A Sbjct: 245 ATCSVGAAQGALDAARRYMDERRQFNRRLAEFQALQFKLADMATHLVAARQMVRLAACKL 304 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D A A + K + M + +A + GG GY+ + + R R++ + Sbjct: 305 DAG------APDAATYCAMAKRFATDMGFQICLDAQQIHGGYGYLRDYPLERLVRDTRVH 358 Query: 441 SILLGSGNAM-VLDVLNLLEKGTNL 464 IL G+ M V+ LLEKG ++ Sbjct: 359 QILEGTNEIMRVIIARQLLEKGADI 383 >gi|91781589|ref|YP_556795.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91685543|gb|ABE28743.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 376 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + LTE + G+D +A+ + + D Y L+G K F++S + ++ V Sbjct: 111 PLARGDMLGAFCLTEPQAGSDASALRTTATREGDE-YLLNGVKQFITSGRNGHVAIVMAV 169 Query: 250 EGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+VP G R+++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----DTPGYVVARVEDKLGQHSSDTAQIIFEDCRVPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AQGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALSYAKERESFGVPLFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFA-------SEAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|255292434|dbj|BAH89552.1| acyl-CoA dehydrogenase [uncultured bacterium] Length = 383 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 20/269 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D AAI ++ + +DG Y L+G K F++S + A I A + G + Sbjct: 123 FALTEPGTGSDAAAIKARAARSNDG-YVLNGAKQFITSARIGGATIAFAVTDPDAGKKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVSTGPVED 311 + + GL + K+G +++ T L F + G L+G+ L ++ +E Sbjct: 182 SAFYIEQANPGLIVAEPERKLGQKASDTCALTFEDLRLDAGALIGEEGQGLAIALSSLEA 241 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I I A SV + +L A YA R G + + + +AD+ + AA Sbjct: 242 GRIGI----ASQSVGMAQAALEYATAYALERVTFGKPIFEHQAVAFRLADMDAQVEAARQ 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A + D + EA+ A+++A T A VI++A++ +GG GY+ E + Sbjct: 298 LVLNAARTKDLGQPCLREASIAKLIASQT-------AERVISDAIQTLGGYGYLSEYPVE 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 R YR++ I G+ + +++ L++ Sbjct: 351 RIYRDARVCQIYEGTSDVQRINISRDLKR 379 >gi|254510044|ref|ZP_05122111.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221533755|gb|EEE36743.1| acyl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 380 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ--VEGRVGCFLV 258 LTE G+D AA+ ++ ++ ++G + L+G K F+S SDA++ + + ++G G V Sbjct: 124 LTEPGSGSDAAALKTRAERTNEG-FTLNGTKAFISGGGYSDAYVCMVRTGIDGPKGVSTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +EDG+P GL + L+ K+G +S T +++F + + D V T ++ L Sbjct: 183 --YVEDGTP-GLSFGALEQKMGWKSQPTAQVQFDDC--KIPADNLVGTEGDGFKYAMMGL 237 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D ++++ + A+ + Y R G + ++ +AD+ +++ AA Sbjct: 238 DGGRLNIAACSLGAAQYGLDMTLQYMSERKAFGQPIDQFQALQFRLADMEIELQAARTFL 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D+ A A + K + V+ + ++ GG GY+ + I + Sbjct: 298 RQAAWKLDQG------APDATKFCAMAKKLATETGSKVVDQCLQLHGGYGYLADYGIEKL 351 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 352 VRDLRVHQILEGTNEIM 368 >gi|90419691|ref|ZP_01227601.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90336628|gb|EAS50369.1| glutaryl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 407 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 32/257 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D +T++ +KI DG Y LSG K W +SP++D F++ A Sbjct: 138 PRLATGEYVGCFGLTEPDAGSDPGGMTTRAEKI-DGGYRLSGAKIWISNSPIADVFVVWA 196 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + + ++ F++ D GL +++ K+ R++ T E+ LL + Sbjct: 197 KSAAHDNKIRGFIL-----DKGMKGLSAPKIEGKLSLRASITGEIVMDGVEVGEDALLPN 251 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 ++ GP L+ A +S + AE A Y R G L +++ Sbjct: 252 VSGLGGP------FGCLNRARYGISWGAMGAAEDCWKRARDYTMERTQFGRPLAQTQLIQ 305 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD+ +IA S R+ FD E A A M + K C A + A Sbjct: 306 KKLADMQTEIALGLQGSLRVGRLFD-------EGAMAPEMISLVKRNNCGKALDIARTAR 358 Query: 417 ECIGGSGYIEERSIARH 433 + GG+G + E + RH Sbjct: 359 DMHGGNGIMGEYHVMRH 375 >gi|310829333|ref|YP_003961690.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612] gi|308741067|gb|ADO38727.1| hypothetical protein ELI_3771 [Eubacterium limosum KIST612] Length = 379 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF-LSSPMSDAFIM--LAQVEGR---V 253 GLTE G+D + + D Y L+G K F + P++D F + L Q E + + Sbjct: 123 FGLTEPNAGSDAGGCITTATREGD-HYILNGAKCFNTNGPLADYFAVYALTQPEKKAKGL 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFLV + G+P G ++++K+G R+ EL F N + N+ + K Sbjct: 182 SCFLVKK----GTP-GFSIGKIEDKMGIRAAQVSELIFDNC---KIPAENLMGEEGQGFK 233 Query: 314 I-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + LD + V+ + LAE A Y +R G L + + ++ I Sbjct: 234 VAMKTLDGGRIGVAAQGLGLAEGAFEIARKYLMQREQFGKPLYKNQYLAFKMVELECQIE 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + ++ A E + + AA A+++ C A V EA++ +GG+GY+++ Sbjct: 294 QARLMLYKAALDKSEGRPYTLSAAKAKLL-------CTDAAMHVTTEAVQMLGGNGYMKD 346 Query: 428 RSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 347 YHVERMMRDAKITQIYEGT 365 >gi|307565066|ref|ZP_07627579.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii CRIS 21A-A] gi|307346235|gb|EFN91559.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella amnii CRIS 21A-A] Length = 569 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 30/328 (9%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 170 TMSMDLTEPDAGSDLQRVMLKASFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTKD 229 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + + D G+ + ++NK+G + T EL + N L G N G ++ + Sbjct: 230 GRGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRLGLIKYVMA 287 Query: 315 LI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ L A SV + + EA+ YA+ R G +I+ P + ++ + + A + Sbjct: 288 LMNGARLGIAAQSVGVSQEAYNEALAYAKERAQFGKKIINMPPVYDMLSRMKAKLDAGRS 347 Query: 372 LSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAE 414 L ++ A D K+ R E Y R+ PI K + + Sbjct: 348 LLYQTARYVDLYKALEDIARFEKLSPEERQEMKKYTRLADAFTPIAKGMNSEYVNQNTYD 407 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL---FEQLFST 471 ++ GGSG+I E R YR++ SI G+ V+ + GT L E L Sbjct: 408 SISVHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAANRYVMNGTYLGIMREMLAEP 467 Query: 472 LEQDLGSSGKKVITILRD---SISLCKE 496 + +D+ K++ ++ + SI+ KE Sbjct: 468 VSKDMQPLSKRIEKMVEEYESSINKVKE 495 >gi|149378049|ref|ZP_01895772.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149357659|gb|EDM46158.1| putative acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 402 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 27/268 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 + +TE G+D AAI + + DG Y L+G K ++++ +DA ++ A ++ G + Sbjct: 132 MAITEPGAGSDSAAIRTTATEDGDG-YILNGEKIYVTAGERADAVVVWATLDRNKGRAAI 190 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST--GPVEDM 312 ++E G+P G+ +RL+ K+G R++ T + F N LLGD +VS G M Sbjct: 191 KSFVVEKGTP-GMTVERLEKKLGIRASDTAAIRFDNCRVPKENLLGDPDVSVEKGFAGAM 249 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-GGILI-------DQPVMKRAIADIAL 364 + D+ V+GM + +A A R ++ GI + QP + R + + Sbjct: 250 QT---FDNTRPVVAGMAIGVASAALQKTRELIALTGIDLGYHTQTWTQPAVTRELQLMEA 306 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA L+ R A D S+EA+ A+ A ++ V +E G GY Sbjct: 307 ELEAARLLTLRAAWMADNGLPNSKEASIAKAKA-------GRVGNMVTLRCVELCGSLGY 359 Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452 E + + R+S I G+ +L Sbjct: 360 GETELLEKWARDSKILDIFEGTQQIQLL 387 >gi|146282280|ref|YP_001172433.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145570485|gb|ABP79591.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 379 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 30/273 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P+ + LTE + G+D +++ ++ ++ D Y L+G K F++S +++ Sbjct: 110 GPLARGEQIGAFALTEPQAGSDASSLRTRARRDGDH-YVLNGAKQFITSGKHAGTVIVFA 168 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTF 295 V G+ G F+VP SP G R+++K+G ++ T ++ F +N Sbjct: 169 VTDPDAGKRGISAFIVP----TDSP-GYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRL 223 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G ++ +E +I I A +V R + A YA R G +I+ + Sbjct: 224 GEEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAGERETFGKPIIEHQAV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A IA A + A + E A + A + K + +MA V + A Sbjct: 280 AFRLADMATQIAVARQM-------VHHAAALREAGRPALVEASMAKLFASEMAERVCSAA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ +GG GY+ + + R YR+ I G+ + Sbjct: 333 IQTLGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|13541501|ref|NP_111189.1| Acyl-CoA dehydrogenase [Thermoplasma volcanium GSS1] Length = 417 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 16/260 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVEGR-------V 253 +TE GG+D+ + Y L+G K F+ +D F+ A + + Sbjct: 123 ITEPSGGSDLFGMMKTTAVKKGNKYILNGQKRFIVGGKGADFFVTYAITDPNAKSRTRGI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+V R +P GL + L +GN+ T + + + L+G+LN Sbjct: 183 SAFIVDR----DTP-GLKVETLYGLMGNKGGGTARIVYKDAEVPEENLIGELNGGYEVFN 237 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 M I L +A S+ +L A YA +R G LI+ + +A+ + +A+ Sbjct: 238 RMMIPERLTTAAGSLGVSTAALKVATDYALKREAFGSKLIEHEGINFKLAESLTLLQSAS 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL + A + D + +YAR + + K + ++ +AM+ +GG GY I Sbjct: 298 ALVYTAAKAADLYEKGQTTQSYARKLVSMAKLHSTEAMWKIVNDAMQIMGGIGYTTVYPI 357 Query: 431 ARHYRESPANSILLGSGNAM 450 R R+S I GS M Sbjct: 358 ERLLRDSRLGLIWTGSSEVM 377 >gi|297160327|gb|ADI10039.1| short/branched chain acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 388 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 37/274 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252 GLTE GG+D A + + + G + ++G K F+++ +D A I + V GR Sbjct: 125 FGLTEPSGGSDAGATRTTARLDEATGEWVINGTKCFITNSGTDITALITVTAVTGRKPDG 184 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306 + +VP G+P GL +K+G ++ T EL FS+ LLG+ Sbjct: 185 SPKISTIIVP----SGNP-GLTVAAPYSKVGWNASDTRELSFSDCRVPADHLLGEKGRGY 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + L LD +++S M LA E++ YA+ R G + ++ IAD Sbjct: 240 A-----QFLQILDEGRIAISAMATGLAQGCVDESVAYAKTREAFGRPIGANQAIQFKIAD 294 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A R+A + +A SR + A I K + ++A EA + GG Sbjct: 295 MEMRAHMA-----RVA--WRDAASRLVRGEPFKKEASIAKLYSSEVAVTNAREATQVHGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G++ E +AR +R+S + +G G + V +L Sbjct: 348 YGFMNEYPVARMWRDS--KILEIGEGTSEVQRIL 379 >gi|218673846|ref|ZP_03523515.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli GR56] Length = 381 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ D Y L+G K W ++P ++ ++ A+ + G + Sbjct: 124 LAMSEAGAGSDVVSMRLRAERKGD-RYILNGTKFWITNAPHAEVLVVYAKTDPAAGPKGI 182 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 L+ E G P G + +K+G R + T EL F + L+G E +KI Sbjct: 183 SALIIEKGMP-GFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREG------EGVKI 235 Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LD ++G M+ L + Y R R G + D +M+ IAD+ + + + Sbjct: 236 LMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKPIGDFQLMQAKIADMYVALNS 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A + +A + D ++ +AA A + A + A V EA++ +GG+GY +E Sbjct: 296 ARAYVYSVARACDAGRTTRIDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEW 348 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 PVERFLRDAKLYDIGAGT 366 >gi|119718512|ref|YP_925477.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119539173|gb|ABL83790.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 383 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 34/280 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGRVG 254 GLTE G+D A + ++ + D + L+G K F+++ +D ++ A+ V Sbjct: 123 FGLTEPDNGSDAANLRTRAVRDGDD-WVLNGAKIFITNGTWADVCLVFARTGEPGPRGVS 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLVP L G Q + K+G R AT EL F N +LG E Sbjct: 182 AFLVPTDLP-----GFGRQEIHGKLGLRGQATAELSFDNVRVPADAMLGAEG------EG 230 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 KI ++ LD +SV V + + + Y+ +R G L +++ IA+I+++ Sbjct: 231 FKIAMHSLDKGRVSVGAGCVGIIQGCLEAVVDYSVQRRQFGRQLASFQLIQDMIAEISVE 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA L +R A+ + + EA+ A KY+ + A A++ GG GY+ Sbjct: 291 ADAARLLVWRAADLIERDQPFGTEASKA-------KYFASEAAVRAANLAIQAFGGYGYV 343 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 +E + ++ R++ ++ G+ L ++ E G + F Sbjct: 344 DEYPVQKYMRDARVMTLYEGTSQIQKL-LIGRAETGVSAF 382 >gi|332840602|ref|XP_003314022.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial [Pan troglodytes] Length = 408 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FLVP GL + ++K+G R ++T L F + + ++ P Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257 Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL + Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALAL 317 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY+ Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 371 EMPAERHYRDARITEIYEGT 390 >gi|260554906|ref|ZP_05827127.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411448|gb|EEX04745.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 607 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 71/366 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML------------ 246 L+E + G+ +A I ++ K DG Y L G+K ++S +SD + L Sbjct: 165 LSEPQAGSSLADIRTRAIKTKDGRYRLFGNKMWISGGEHDISDNIVHLVLAKIPDENGQL 224 Query: 247 -AQVEGRVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF--------- 291 A V+G + F VPR L E+G P N + + +K+G R L F Sbjct: 225 PAGVQG-ISLFTVPRKLLDENGQPSERNDVVLAGINHKMGYRGTVNCVLNFGEGRFTPEG 283 Query: 292 -SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + G L+G+ + M +I + L +A + +G A+ YA+ R V G Sbjct: 284 EAGAIGELVGEAGKGLAYMFHMMNEARISVGLGAAALGYTGY----LHALDYAKTR-VQG 338 Query: 347 GI------------LIDQPVMKRAIADIALDIAAATALSFRLA------NSFDEAKSRSE 388 LI ++R + ++ A AL A +S ++A+ ++ Sbjct: 339 RSRSERNPSSPQIPLIQHADVRRMLLAQKAYVSGALALCLYAARLTDDIHSLEDAEQSNQ 398 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 399 AHQLLDLLTPVVKSWSSEWGLVANDLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTFG 458 Query: 449 AMVLDVL---NLLEKGTN---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 LD+L L +G + L E++ +T+ Q K L+D + L R Sbjct: 459 IQALDLLGRKTRLNQGLSMKLLHEKIMNTIAQ------AKAEPSLKDHADQLDQKWQLIR 512 Query: 503 FLTEKI 508 +TEK+ Sbjct: 513 NVTEKL 518 >gi|256372243|ref|YP_003110067.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008827|gb|ACU54394.1| acyl-CoA dehydrogenase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 401 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 45/301 (14%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-WFLSS 237 R Y P Q+ S GL+E G+D+ + ++ D G + LSG K W Sbjct: 107 RRYLPGIADGTQRAS----FGLSEAEAGSDVVGMRTRAVPDPDRPGGWILSGRKSWISGV 162 Query: 238 PMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 +D + + A+ + F+V R S G+ R+ +K+G T EL Sbjct: 163 RQADWYTVFAKTGDPTSRRHDAITAFIVER-----SWPGVDVPRVDHKMGVHGVDTGEL- 216 Query: 291 FSNTFGFLLGDLNVS----TGPVEDMKILIYLDSAIMSVSGMR-VSLAE-----AIHYAR 340 LL ++ V G V ++ + +A+ V R + LAE A Y R Sbjct: 217 -------LLDEVRVPPENVIGEVGGFRLAMLGLNAMRPVVAARGIGLAEGALMYATTYVR 269 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R GG + D ++ +A +A +I AA L++R A D+ + E + + Sbjct: 270 NRPAFGGRIADFQGIQWELAKLATEIEAARLLTYRAAWLADQGRFTREWVPFLSM----A 325 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 KY+ ++A + A++ +G +GY+ + +YR++ +I+ G+ LNL+ + Sbjct: 326 KYYATELAVRASSVALQLLGAAGYMSDHPTELYYRDAKQLTIVEGTSQVQ----LNLIAR 381 Query: 461 G 461 G Sbjct: 382 G 382 >gi|168008655|ref|XP_001757022.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691893|gb|EDQ78253.1| predicted protein [Physcomitrella patens subsp. patens] Length = 365 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 30/263 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVG----- 254 LTE G+D A++ + ++ + Y L+G K F+S +D ++++A+ G G Sbjct: 106 LTEPNSGSDAASLQTTARRQAGSTDYILNGEKAFISGGGAADVYLVMART-GEAGPKGIS 164 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTG 307 CF V D GL + R ++K+G RS T + + G ++ Sbjct: 165 CFYV-----DKDSKGLSFGRQEDKLGWRSQPTSSVILDDVRVPERCLIGKEGEGFTIAMS 219 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A SV G + + A Y R G +ID + +AD+ + Sbjct: 220 ALDGGRINI----ATCSVGGAQFCVDAAQGYVSTRKQFGKAIIDFQNTQFKLADMLTKVQ 275 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ L A + D +A +A A + K + V +A++ GG GY+++ Sbjct: 276 ASRCLVLNAATALD------SKAPWASASAAMAKRFATDECYNVANDALQLHGGYGYLKD 329 Query: 428 RSIARHYRESPANSILLGSGNAM 450 ++ R+ R+ ++IL G+ M Sbjct: 330 YAVERYVRDLRVHTILEGTNEIM 352 >gi|116694650|ref|YP_728861.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha H16] gi|113529149|emb|CAJ95496.1| Acyl-CoA dehydrogenase, long-chain specific [Ralstonia eutropha H16] Length = 378 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG---QKISD 223 T K W P++ S E + + ++E G+D+ AI ++ Q + Sbjct: 98 TEAQKKKWLPQMASGE-------------MVAAIAMSEPGAGSDLKAIRTRAVREQTENG 144 Query: 224 GIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 Y ++G K F+++ +D ++A+ + G G LV ++E G R+ KI Sbjct: 145 DCYRINGAKTFITNGYHADLVCVVAKTDPEAGSRGVSLV--MVETRDLPGFRRGRILEKI 202 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMR 329 G + T EL F + L G P E M I A+ +V+ M+ Sbjct: 203 GQKGQDTAELFFDDVLVPCDNLLGTQEGQGFYQLMQQLPQERMII------ALGAVATMQ 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 ++ Y R R V G L D + + +A ++ A D+ R + Sbjct: 257 RAIELTTEYVRERKVFGQPLAD-------LQNTRFKLAECKTVATIAATFVDDCMLRLMD 309 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A + K+WC + VI E ++ GG GY+ E IAR Y + + I GS Sbjct: 310 GKLDAATAAMAKWWCTQQNCQVIDECLQLHGGYGYMLEYPIARMYANARVSKIFGGSNEI 369 Query: 450 M 450 M Sbjct: 370 M 370 >gi|89069339|ref|ZP_01156698.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516] gi|89045106|gb|EAR51177.1| isovaleryl-CoA dehydrogenase [Oceanicola granulosus HTCC2516] Length = 386 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K D +Y L+G+K W + ++ ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVGMKLRAEKRGD-VYVLNGNKYWITNGGEAETLVVYAKTDPEAGSRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G +K+G R + TVEL F + + NV + +++L+ Sbjct: 187 TAFLVEKGFAGFSQSPHFDKLGMRGSNTVELVFEDV---EVPAENVLGAEGKGVRVLMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M L E + Y R R G + +M+ IAD+ + A A Sbjct: 244 LDYERVVLSGIGTGIMAACLDEIMPYLRERRQFGQPIGSFQLMQGKIADLYTKLNTARAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + + A V +A++ +GG+G++ E ++R Sbjct: 304 VYEVARACDRGQVTRQDAAACVL-------YASEEAMVVAHQAVQAMGGAGFMNETPVSR 356 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 357 IFRDAKLMEIGAGT 370 >gi|84501840|ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84389835|gb|EAQ02469.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 388 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 42/301 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 TP W P I S E T+VA+ TE G+D+A + ++ + DG Sbjct: 113 TPEQKARWMPSIVSGEM---------ITAVAV----TEPGAGSDVAGMRTRA--VQDGSD 157 Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 + L+G K F+++ + D + + A+ + G G + +E G+P G R NK G Sbjct: 158 WVLNGTKMFITNGVHGDLYFVGAKTDPDAKGSRGITMFA--VEKGTP-GFSVGRALNKTG 214 Query: 281 NRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMKILIYLDSAIMSVSGMRVSLA 333 + T EL F +LG++N V ++ +I++ M+ + + +L Sbjct: 215 WLCSDTAELIFEEVRIPTENVLGEVNHGFYSVMKNFQNERIVL----GAMACAEAQTALD 270 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + Y ++R GG L D+ +++ +AD I A L + A + +E + Sbjct: 271 ITVDYVKQRKAFGGALWDKQAVRQRLADCQTRIVAGRQLVYHAAGLDAAGRDCVKEVS-- 328 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 + K +C ++ +V+ + ++ GG GY+ E + R R++ +I G+ M+ + Sbjct: 329 -----MVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIGGGASEVMLEE 383 Query: 454 V 454 V Sbjct: 384 V 384 >gi|311692893|gb|ADP95766.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] gi|311693896|gb|ADP96769.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 389 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 32/288 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S E+ IG L ++E G+D+ ++ + D Sbjct: 110 TEEQKQKYLPKLVSGEH--------------IGALAMSEPNAGSDVISMKLTAKDEGDH- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G+K W + P ++ +++ A+ + G V + + G + +K+G R + Sbjct: 155 YLLNGNKMWITNGPDANTYVIYAKTDTSAGSRGVTAFIVERDAPGFSRHQKLDKLGMRGS 214 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHY 338 T EL F + + NV G K+L+ LD + +SG M+ ++ + Y Sbjct: 215 NTCELVFQDC---KVPKENVLGGVGNGAKVLMSGLDYERLVLSGGPLGIMQAAMDVVVPY 271 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R R G + + +++ +AD+ + A + + +A S D + + A I+ Sbjct: 272 IRERKQFGQAIGEFELVQGKVADMYTWMNTAKSYVYMVAMSADRGAETTRKDAAGAIL-- 329 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +MA + +A++ +GG+GYI E R R++ I G+ Sbjct: 330 ----YSAEMATKIALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGT 373 >gi|157364682|ref|YP_001471449.1| acyl-CoA dehydrogenase domain-containing protein [Thermotoga lettingae TMO] gi|157315286|gb|ABV34385.1| acyl-CoA dehydrogenase domain protein [Thermotoga lettingae TMO] Length = 379 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 25/266 (9%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV 249 +Q T + LTE GTD AA ++ D Y L+G K F+++ +D FI+ A Sbjct: 115 LQGTKIG-AFALTEPNAGTD-AASQQTTARLQDNHYVLNGSKVFITNAAHADVFIVFAMT 172 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + + + + +G ++++K+G R ++T EL F N LLG+ + Sbjct: 173 DRSKATKGISAFIVERGFDGFRIGKIEHKMGIRGSSTAELVFDNCKVPRDNLLGEEGMG- 231 Query: 307 GPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 KI + LD + V+ + +AE + Y + R G L ++ IA Sbjct: 232 -----FKIAMSTLDGGRIGVAAQALGIAEGAFNECVKYMKDRKQFGKTLSSFQGLQWYIA 286 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A I AA L ++ A S + +AA A++ A +++ V ++ G Sbjct: 287 EMATQIEAARNLVYKAAWKKQNNLSHAVDAAMAKLFA-------SEISMKVTTTVVQIFG 339 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY ++ + R R++ I G+ Sbjct: 340 GYGYTKDYPVERMMRDAKITQIYEGT 365 >gi|311106637|ref|YP_003979490.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310761326|gb|ADP16775.1| acyl-CoA dehydrogenase FadE25 2 [Achromobacter xylosoxidans A8] Length = 387 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 41/268 (15%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----E 250 A+ L+E+ G+D AA+++ DG + + G K W + S FI+ A+ Sbjct: 123 AVNFALSERGAGSDAAALSTTAVPEGDG-WRIRGEKCWLGNGGHSRYFIVFARTGEPGAR 181 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF--LLGDLNVSTGP 308 + F+V R G+ ++K+G R T L+ G ++G L Sbjct: 182 NNISAFVVDR-----DAPGVVVDHYEDKMGIRGTTTTNLKVDTWVGAESVVGALG----- 231 Query: 309 VEDMKILIYLDSAIMSVSGMRV----------SLAEAIHYARRRHVSGGILIDQPVMKRA 358 E +K+ + A +S+ + V S AEA +A +R G +ID + Sbjct: 232 -EGLKLAL----ATLSIGRVVVAAQANGIALCSYAEARDFAVQRQTFGRSIIDHQGVGFK 286 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD A ++++ +++ A ++D + A A+++A T + +V+ +AM+ Sbjct: 287 LADAATALSSSRMMTYEAARAYDAGQDIGTLGAMAKLLASETSH-------SVVDDAMQI 339 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 + G GY++ ++ R YR+ I G+ Sbjct: 340 LAGRGYVKPSAVERCYRDQRITEIYEGT 367 >gi|238923142|ref|YP_002936655.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656] gi|238874814|gb|ACR74521.1| butyryl-CoA dehydrogenase [Eubacterium rectale ATCC 33656] Length = 389 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 27/285 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236 F E P + IG GLTE GTD A Q + + DG + L+G K F++ Sbjct: 101 FGTEEQKKKYVPDLASGKKIGAFGLTEPGAGTD--AQGCQTKAVLDGDEWVLNGSKCFIT 158 Query: 237 S-PMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++D +I++A GR +++ G+P G + + K+G R ++T EL Sbjct: 159 NGKVADVYIIIAITSITEDKRGRKKKNFSAFIVDKGTP-GFSFGTKEKKMGIRGSSTYEL 217 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARR 341 F + LLG P+ + LD + ++ + +AE I Y + Sbjct: 218 IFEDARIPKNALLGKEGRGF-PI----AMHTLDGGRIGIAAQALGIAEGALERTIEYTKE 272 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + Q + +AD+A I AA L + A E +++ + +Y+ + A K Sbjct: 273 RKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAMKKAEF-AKNPKVSYS-VDAAKAK 330 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A AV E ++ GG GYI E + R R++ I G+ Sbjct: 331 LFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAKITEIYEGT 375 >gi|229492562|ref|ZP_04386365.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229320548|gb|EEN86366.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 383 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 15/268 (5%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247 P T +G +G+TE G+D+ AIT+ + D Y ++G K F+++ S I+LA Sbjct: 116 PGMATGEILGAIGMTEPGTGSDLKAITTSAVRDGDH-YVVNGSKTFITNGGSADMIVLAV 174 Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL- 302 + + + G V L+ D G R+ +K+G T EL F++ LLG+ Sbjct: 175 KTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGESE 234 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + G + + L ++ + ++ E + Y + R G L + + Sbjct: 235 GLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYTKARQAFGHSLFE-------FQNT 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++A ++ D A + KYW + AV+ ++ GG Sbjct: 288 AFELAECQTIARTCRVFLDNCIEDHLNGELDGADAAMVKYWLTEQQCAVVDRCVQLYGGY 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y +S I G+ M Sbjct: 348 GYMREYPIARMYEDSRVQKIYAGANEVM 375 >gi|45656266|ref|YP_000352.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599500|gb|AAS68989.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 394 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 43/281 (15%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVG 254 G+G+TE GTD+ + + K D Y L+G K ++++ + F++ A+++ R Sbjct: 132 GMGMTEPGAGTDVLGMRTIAVKKGDK-YVLNGSKQYITNGNVGSVFLVYAKMDKDSKRTT 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F+V + S G + + K+G RS+ T +L F D V P E++ Sbjct: 191 SFIV-----ESSFPGFSVGKKEEKMGMRSSPTTQLIFE--------DCEV---PAENLVG 234 Query: 313 -------KILIYLDSAIMSVSGMRVSLAE------AIHYARRRHVSGGILIDQPVMKRAI 359 ++ L+ ++++ + +A+ A + R R G L + ++R + Sbjct: 235 QEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTIRHREAFGKKLSEFGQIQRLL 294 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A+ D AA AL +++A+ S AA A+++A +MA V A++ + Sbjct: 295 AESYADYQAARALVYQVASGIHPESRNSLGAASAKLVA-------TQMAERVSRNAIQAL 347 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY E + R +R+S SI G+ AM +++ L+K Sbjct: 348 GGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKK 388 >gi|258651953|ref|YP_003201109.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555178|gb|ACV78120.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM 44233] Length = 396 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 35/278 (12%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 G GLTE G+D A ++ + DG + ++G K F+++ S + L V R G Sbjct: 123 GFGLTEPGAGSDAGATRTKADLV-DGEWIINGAKQFITNSGS-SITSLVTVTARTGERTG 180 Query: 259 PR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305 R ++ G+P G + +K+G + T L F SN LLG+ Sbjct: 181 GRPEISTVIVPAGTP-GFLVEPAYHKLGWHISDTHPLTFIDCRVPESN----LLGERGRG 235 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 + L LD ++++ + V L +A + YA RH GG + + + IA Sbjct: 236 Y-----AQFLSILDDGRVAIAALAVGLIQACVDLCVQYATDRHTMGGPIGRKQGVAFPIA 290 Query: 361 DIALDIAAATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 D+ + + A+ AL++R A D + A + A + K + + A A + Sbjct: 291 DLEVMLHASRALTYRAAAMKDAMLAGHPGAPTVARFKHAAAVAKLYSSESAVTATRIATQ 350 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG G++EE +AR YR+ A + +G G + V +L Sbjct: 351 VFGGYGFMEEYPVARFYRD--AKILEIGEGTSEVQRLL 386 >gi|224370913|ref|YP_002605077.1| Acd11 [Desulfobacterium autotrophicum HRM2] gi|223693630|gb|ACN16913.1| Acd11 [Desulfobacterium autotrophicum HRM2] Length = 405 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 19/258 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-F 256 G G+TE G+D+ A+ + + D Y L+G K W ++ ++D I A + +G Sbjct: 141 GFGITEADAGSDVMAMATTAEDKGDH-YLLNGSKTWISNAAIADVLICYAYTDKSIGTKG 199 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L ++E + G+ L+ K+G+ S+ T E+ N + N+ + KIL Sbjct: 200 LSAFVIEPKNFPGISTSALE-KLGSHSSPTGEVFLDNV---KVPKENLLGKSGDGAKILF 255 Query: 317 ------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L +A V + L EAI Y R G + + + IA +A +I AA Sbjct: 256 GSLNHTRLSAAAGGVGLAQACLDEAIKYCNTRKQFGKPIGLFQMNQDMIAQMAAEIDAAR 315 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +R A D+ + + KY ++A AM +G GY E + Sbjct: 316 FMVYRAAFEKDQGNINN------GLDVAKAKYLAGEVATKASNFAMRILGAYGYSTEYPV 369 Query: 431 ARHYRESPANSILLGSGN 448 AR YR++P S++ GS N Sbjct: 370 ARFYRDAPTYSMVEGSAN 387 >gi|111022170|ref|YP_705142.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821700|gb|ABG96984.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 611 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 43/287 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGASRTKAIKQDDGSWHIEGVKRFITSADSDDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL------EDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ E G NG+ +++K+G + +AT E+ F G+L+ Sbjct: 224 TKGLSLFFVPKTHFNFETNELGERNGVFVTNVEHKMGLKVSATCEVTFGGHGIPAQGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 G+++ + D+ + +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFDVIEHARMMVGTKAIATLSTGYLNALDYAKER-VQGADLTQMTDKAAPR 342 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAY--ARIMAPI 399 P ++RA+A A+ A DEA ++ ++ A+ ++ PI Sbjct: 343 VTITHHPDVRRALAMQKAYAEGLRAVYLYTAAHQDEATAKLVSGADKDLAFRVNDLLLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + A + ++++ GGSG++++ I ++ R++ +S+ G+ Sbjct: 403 VKGVGSERAYQYLTDSLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|260906698|ref|ZP_05915020.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2] Length = 383 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 127/262 (48%), Gaps = 34/262 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-----GR- 252 GL+E+ G+D A++ ++ ++DG + L+G K W ++ +S+ + ++A + GR Sbjct: 126 GLSEREAGSDTASMKTRA--VADGDDWILNGVKTWITNAGVSEYYTVMAVTDPDGARGRN 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+V + S G + + K+G + + T EL F N L GD + P E + Sbjct: 184 ISAFVVEK-----SDEGFTFGEKERKLGIKGSPTRELLFDNVR--LPGDRIIGD-PGEGL 235 Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L LD ++++ V +A+ AI Y + R G + + ++ +AD+ + + Sbjct: 236 KIALRTLDHTRVTIAAQAVGIAQGALDYAIGYVKERQQFGKNIAENQAIQFMLADMGMKL 295 Query: 367 AAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA L++ A AKS+ E+ Y K + A + +A++ +GG+GY Sbjct: 296 EAARQLTYTAA-----AKSQRMDEDLTY---FGAAAKAFASDAAMEITTDAVQLLGGAGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 + + + R R++ I G+ Sbjct: 348 VVDHPVERMMRDAKITQIYEGT 369 >gi|55377615|ref|YP_135465.1| acyl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55230340|gb|AAV45759.1| acyl-coA dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 382 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 35/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG--- 254 L+E G+D+ A+ + + + G Y ++G K W + ++D ++ A+ + G Sbjct: 123 FALSEAGAGSDVPAMDTTAEPVDGGDAYLVNGGKLWISNGSVADTVVLFAKTDPEAGNKG 182 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 F+V R ED +G + ++K+G++ T EL F +LG+ G V Sbjct: 183 ISSFIV-RPEED---DGFIVEGTEHKLGDKGCPTAELRFDEMRIPADRMLGE--EGRGFV 236 Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADI 362 +K L + A V + +L EA+ YA+ R DQP+ ++ +AD+ Sbjct: 237 HALKTLNGGRITIAARGVGIAQAALDEALQYAQDRE-----QFDQPISDFQAIQHKLADM 291 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AA L + A+ +S +EAA A++ + +++ V E ++ GG Sbjct: 292 DTKTQAARLLMHQAADKKMAGESFVKEAAQAKL-------YASEVSREVANEGIQVHGGY 344 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY ++ R YR++ N I G+ + Sbjct: 345 GYTKDFPAERFYRDAKLNEIYEGTSEVL 372 >gi|33603388|ref|NP_890948.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33577512|emb|CAE34777.1| putative acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 389 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D+AA+ + + DG Y L+G K W + ++D + + A+ Sbjct: 123 PVARGEAIAAFALSEPEAGSDVAALACEARADGDG-YVLNGEKTWISNGGIADFYCVFAR 181 Query: 249 VEGRVGCFLVPRLLED-GSPNGLCYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLN 303 G + + D G+P +R+ + + A + S G Sbjct: 182 TGEAPGARGISAFVVDAGTPGLEIAERIDLIAPHPLARLRFADCRIPASRRLGEAGQGFK 241 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ M + I+ S + G R +L E + AR R + G L D + + A+ D+ Sbjct: 242 LAM-----MTLDIFRASVAAAALGFARRALDEGLARARGRRMFGQTLADLQLTQAALGDM 296 Query: 363 ALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A + A+ L++R A D + R+ EAA A++ A + A AVI A++ GG Sbjct: 297 ATAVDASALLTYRAAWMRDVQEVRTTREAAMAKMTA-------TESAQAVIDRALQMFGG 349 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +G + ++ R YRE A I G+ L + L K Sbjct: 350 AGVVAGATVERLYREIRALRIYEGATEVQKLIIARELLK 388 >gi|299531325|ref|ZP_07044735.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298720732|gb|EFI61679.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 387 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 20/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L+E G+D+AA+ + + D Y ++G K W + ++D +++ + G L Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAAGSRGL 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++E G+P +R+ N I + L+FSN L+G G M+ Sbjct: 189 SALIVEAGTPGFEIAERI-NVIA--PHPLARLKFSNCRVPATQLVG--AAGEGFKVAMRT 243 Query: 315 LIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L +++ + S G R ++ EA+ A R + GG+L D + + +A +A I +A L Sbjct: 244 LDVFRTSVAAASLGFARRAMDEALQRATSRKMFGGVLADFQLTQAKLAQMATQIDSAALL 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D+ ++ + EAA A++ A + A VI A++ GG G + E+ + R Sbjct: 304 TYRAAWLRDQGENVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGVVSEQPVER 356 Query: 433 HYRESPANSILLGS 446 YRE A I G+ Sbjct: 357 LYREIRALRIYEGA 370 >gi|326778232|ref|ZP_08237497.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] gi|326658565|gb|EGE43411.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 608 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ I +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356 + G + +I+ + + +++ + A+ YA+ R V G L +D+ K Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399 I D+ +L A A R + ++ E ++ E+A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + + +A++++ GGSGY++E + ++ R++ +++ G+ D Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460 Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509 + ++G +L +TL +++ G+ G + + DS++ D + +T+ A Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515 Query: 510 LASSAAALYRAGMN 523 +Y+ G+N Sbjct: 516 TGEDVKNIYKVGLN 529 >gi|261418773|ref|YP_003252455.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297531264|ref|YP_003672539.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|319765590|ref|YP_004131091.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|261375230|gb|ACX77973.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|297254516|gb|ADI27962.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|317110456|gb|ADU92948.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 399 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+A+I + + D Y L+G K W + ++D F++ A + + Sbjct: 124 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R + G + +K K+G RS T EL F N + N+ E K Sbjct: 183 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 234 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ +V+ V L A + Y R G + ++++ IA + + Sbjct: 235 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L +++ +E + + E + A+ +A C A +A++ G GY E Sbjct: 295 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNE 347 Query: 428 RSIARHYRESPANSILLGS 446 + R+ R S A I G+ Sbjct: 348 YPVERYLRNSKAPVIYEGT 366 >gi|111020014|ref|YP_702986.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819544|gb|ABG94828.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 414 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 40/260 (15%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250 V LTE G++ A +T++ + DG + ++G K F++ +P++D F++ A+ Sbjct: 146 VVASFALTEPEAGSNPAGLTTRA-VLKDGKWTINGTKRFITNAPLADLFVVFARTRPADE 204 Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305 + FLVP G+ K+G T E+ F D++V Sbjct: 205 TGTGIAVFLVP-----ADTAGVVVGPKDKKMGQEGAWTAEVAFD--------DVSVPESA 251 Query: 306 -TGPVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 G E+ + S A ++V + +L E++ +A G + D +++ Sbjct: 252 LVGGSEEAGYRAAMTSLARGRVHIAALAVGSAQRALDESVAFAAVTKQGGTPIGDFQLVQ 311 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD + ++A AL A + + R RI + K +C +MA V A+ Sbjct: 312 AMLADQQVGVSAGRALVRDAAQKYVSGEDR-------RIAPSVAKLYCTEMAGKVADLAV 364 Query: 417 ECIGGSGYIEERSIARHYRE 436 + GG+GY+ + + R YRE Sbjct: 365 QVHGGTGYMRDVPVERIYRE 384 >gi|145221013|ref|YP_001131691.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315442015|ref|YP_004074894.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145213499|gb|ABP42903.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315260318|gb|ADT97059.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 611 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 86/372 (23%), Positives = 159/372 (42%), Gaps = 50/372 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHIDGVKRFITSADSDDLFENIMHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ E G P NG+ +++K+G + + T EL G+L+ Sbjct: 224 TKGLSLFFVPKFHFDHETGEPGERNGVFVTNVEHKMGLKISTTCELSLGQHGTPAVGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356 G+++ + D+ + +++ + A+ YA+ R V G L D+ + Sbjct: 284 GEVHDGIAQMFDVIEQARMMVGTKAIATLSTGYLNALAYAKDR-VQGADLTQMTDKTAPR 342 Query: 357 RAIA---DI--ALDIAAATALSFRLANSFDEAKSRSEEAAYAR------------IMAPI 399 I D+ +L A A R F +E A +M PI Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLFTATHQNAEMAKVVHGIEPDLAVRVNDLMLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + A A + E+++ GGSG++++ I ++ R++ +S+ G+ D Sbjct: 403 VKGVGSEQAYAKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFFFRKI 462 Query: 457 LLEKGTNLFEQLFSTLEQDL-GSSGKKVITILRDSISLCKED-KGLARFLTEKI-ALASS 513 + +KG L + +EQ + +G + R ++ ED +G+A LT + A Sbjct: 463 VRDKGVAL-AHVAGQIEQFVKAETGNGRLKAERALLATALEDVQGMAASLTGYLMASQED 521 Query: 514 AAALYRAGMNDI 525 AA+Y+ G+ + Sbjct: 522 QAAIYKVGLGSV 533 >gi|319443183|ref|ZP_07992339.1| acyl CoA dehydrogenase [Corynebacterium variabile DSM 44702] Length = 587 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 60/378 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEG--- 251 + L+E G+ + +T+ K DG Y L G K ++S + ++LA+ G Sbjct: 165 MNLSEPGTGSALGDLTTAATKQEDGTYRLRGDKMWISGGDQEVSENIVHLVLARTGGPGV 224 Query: 252 -RVGCFLVPRLLEDGSP------NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + F+VP+ L G P NG+ + +K+G R L + + G+L+G Sbjct: 225 KGLSLFIVPKWL--GEPGNLTERNGVTLVGVNHKMGYRGTVNTALNYDDATGYLIG---- 278 Query: 305 STGPVEDMKILIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------ 348 E+ + L Y ++ A + V +L R + G I Sbjct: 279 -----EEGRGLFYMFHMMNEARIGVGAGATALGVTGFLHSRDYARGRIQGRPLDAKDPKT 333 Query: 349 ----LIDQPVMKRAIADIALDIAAATALSFRLANSFDE--AKSRSEEAAYA----RIMAP 398 +I ++R + + A A+ A DE A S EE A ++ P Sbjct: 334 PAVPIIRHADVRRMLLEQKAYAEGAVAVILYAAKVLDESVAASSPEERTAAHQLLEVLTP 393 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN-- 456 + K W + + A++ +GGSGY + + + YR++ N I G+ LD+L Sbjct: 394 VAKSWPSQWCLEGNSLAIQVLGGSGYTRDYPVEQFYRDNRLNPIHEGTHGIQGLDLLGRK 453 Query: 457 -LLEKGT---NLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALAS 512 LL+ G+ +L ++ +T + L S ++ LR + E +A + + A Sbjct: 454 VLLDGGSGFRDLLGRITATCDG-LADSHPELADPLRSRTTRLAEVTAIA-WEDKDAGTAL 511 Query: 513 SAAALYRAGMNDIADVFL 530 S A +Y DI +L Sbjct: 512 SNATMYLEAAGDIVIAWL 529 >gi|319794988|ref|YP_004156628.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315597451|gb|ADU38517.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 398 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 27/268 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ AI LTE G+D A+ ++ ++ D Y L+G K F+S SP +D +++A Sbjct: 129 PVANADKAICFALTEAEAGSDAGAVQTRAERQGDD-YLLTGRKRFISGSPFADFALVMAS 187 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-----SNTFGFL 298 + + F V + G P K G + LE N G Sbjct: 188 TATDPAQREISAFFV----DLGQPGARVESGYKTMAGQSHTGDIVLEACRVPARNMIGEP 243 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 L ++ G + ++L V RV+L +A+ YAR R G + ++ Sbjct: 244 GRGLALALGRITVNRLL----HCPAMVGLARVALNDALDYARGRRQFGRAISQFQAVQHM 299 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++A D+AAA L A D AR A + K +C + A + A++ Sbjct: 300 LANMATDLAAARGLMIATARQIDAGGE-------ARAEASMAKLFCSEAAFRIADSAVQI 352 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG G ++ R + +R +L G+ Sbjct: 353 HGGEGIVQGRRVEFLFRMLRMYRVLTGT 380 >gi|239994915|ref|ZP_04715439.1| isovaleryl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 342 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + F++ A+ + G + Sbjct: 83 LAMSEPNAGSDVVSMKLKAEKRGD-KYILNGNKMWITNGPDAHTFVIYAKTDPNAGPRGI 141 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G RS+ T EL F + + N+ E +++L+ Sbjct: 142 TAFIVERDFPGFSRAQKLDKLGMRSSNTCELVFEDC---EVPAENILGKEGEGVRVLMSG 198 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + +++ +AD+ + AA A Sbjct: 199 LDYERLVLSGGPLGIMQSCMDIVVPYIHDRQQFGQSIGQFQLVQGKVADMYTQMNAARAY 258 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 259 VYTVAQSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYINEYPTGR 311 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 312 LLRDAKLYEIGAGT 325 >gi|254500692|ref|ZP_05112843.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222436763|gb|EEE43442.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P +D I+ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKLRADKKGD-KYILNGSKMWITNGPSADTMIIYAKTDMDAGPKGM 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGEVGKGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A +V M+ ++ I Y R G + +++ +AD+ + + A+ A Sbjct: 250 ERAVL----AAGAVGIMQAAMDVVIPYVHEREQFGKPIGTFQLVQGKVADMYVSMNASKA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + + + A + +A++ +GG+GYI E Sbjct: 306 YVYAVAKACDRGETTREDAAGAIL-------YAAENATKMALDAIQLLGGNGYINEYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|167744512|ref|ZP_02417286.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 14] gi|254299046|ref|ZP_04966496.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|157809078|gb|EDO86248.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei 406e] Length = 395 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 +P++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 APIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +L + GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|328762225|gb|EGF75721.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL099PA1] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVIFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A Y + R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDYVQNRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|301061918|ref|ZP_07202648.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300444022|gb|EFK08057.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 381 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 33/276 (11%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VG 254 GLTE G+D A + + + + + +SG K F+++ F ++A V + + Sbjct: 124 GLTEAGAGSDPAGMRTIAVR-DNAEWIISGEKKFITNGNVARFAVIAAVTDKEKGYKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V LE+ +P G R++ K+G ++ T EL F + LLG E Sbjct: 183 SFVVD--LEN-TP-GFKVGRVEEKMGILASGTAELIFEDARVPADALLGKEG------EG 232 Query: 312 MK-ILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 K +L L+ + ++ R L +A+ YA+ R G + ++ +AD+A + Sbjct: 233 FKQMLTTLNGGRIGIASQAIGIGRSVLEDAVSYAKTREQFGKPITSFQAIQWKLADMATE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L+ R A D K +EAA A++ + A E ++ +GG GY Sbjct: 293 LDAAELLTLRAAWLEDHKKPYEKEAAMAKM-------YASDAAMRASVEGVQILGGYGYS 345 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 +E + RH R++ I G+ M L V L KG Sbjct: 346 KEYPMERHMRDAKICQIYEGTNEIMRLVVAKNLTKG 381 >gi|170751475|ref|YP_001757735.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170657997|gb|ACB27052.1| acyl-CoA dehydrogenase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 409 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y +SG K W ++P +D F++ A+ + G + Sbjct: 151 FGLTEPDAGSDPAGMKTKAEKI-DGGYRISGAKMWISNAPFADVFVVWAKSDAHEGA-IR 208 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL LK K+ R++ T E+ LL +++ GP Sbjct: 209 GFVLEKGM-KGLSAPTLKGKLSLRASTTGEIVMEGVEVGEDALLPNVSGLKGP------F 261 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L ++++ +AD+ +IA Sbjct: 262 GCLNRARYGISWGAMGAAEDCWHRARSYTLERKQFGRPLAQTQLVQKKLADMQTEIALGL 321 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ DE + E M + K C A + A + GG+G + E + Sbjct: 322 QASLRVGRLMDEGRMAPE-------MISLVKRNNCGKALDIARTARDMHGGNGIMGEYHV 374 Query: 431 ARH 433 RH Sbjct: 375 MRH 377 >gi|307326656|ref|ZP_07605849.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306887640|gb|EFN18633.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 L+E G+D A +T++ + D + L G K W ++D + +LA+ + F Sbjct: 133 LSEPSSGSDAAGLTTRATRDGD-TWTLEGTKAWITHGGIADFYTVLARTGPERTRGISAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G+P GL ++K+G + T ++ G + D + I L Sbjct: 192 LVP----AGTP-GLSAAAPEHKMGMAGSPTAQIHLD---GVRVPDARRIGEEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD+ + ++ V +A EA+ Y +R G + D ++ +AD+A I A Sbjct: 244 SALDAGRLGIAACAVGVAQAALDEALAYTAQRRQFGRPIADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + S++AA A K +C A + +A++ +GG GY + + Sbjct: 304 ALYLAAARLRDAGRPFSKQAAMA-------KLFCTDAAMRITTDAVQLLGGYGYTMDFPV 356 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 357 ERYMREAKVLQIVEGT 372 >gi|53723047|ref|YP_112032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|167821137|ref|ZP_02452817.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91] gi|52213461|emb|CAH39507.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G V Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E A I I K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELV-ATIC--ILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|76819289|ref|YP_336304.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|126445316|ref|YP_001063917.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126456389|ref|YP_001076800.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|134278687|ref|ZP_01765401.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|167725018|ref|ZP_02408254.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98] gi|167743956|ref|ZP_02416730.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] gi|167829501|ref|ZP_02460972.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9] gi|167850983|ref|ZP_02476491.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|167916261|ref|ZP_02503352.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 112] gi|217422116|ref|ZP_03453619.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|226197030|ref|ZP_03792608.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|242312535|ref|ZP_04811552.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|254184585|ref|ZP_04891174.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|254185804|ref|ZP_04892322.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254194251|ref|ZP_04900683.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|254263739|ref|ZP_04954604.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] gi|254300858|ref|ZP_04968302.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|76583762|gb|ABA53236.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|126224807|gb|ABN88312.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126230157|gb|ABN93570.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|134250471|gb|EBA50551.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|157811334|gb|EDO88504.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|157933490|gb|EDO89160.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|169651002|gb|EDS83695.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|184215177|gb|EDU12158.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|217394347|gb|EEC34366.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|225931013|gb|EEH27022.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|242135774|gb|EES22177.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|254214741|gb|EET04126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G V Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E M K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|295706626|ref|YP_003599701.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] gi|294804285|gb|ADF41351.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] Length = 379 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258 GLTE G+D ++ ++DG + ++G K ++++ F+ L V R G + Sbjct: 123 FGLTEPNAGSDAGGTETEA-VLNDGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 ++ G K+G L SNT +L D+ V P E++ Sbjct: 182 SAIIVPTEARGFTVIDNYEKMG--------LHASNTTELVLEDVEV---PEENLLGVRGE 230 Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364 + L+ LD + + M V +A+A + YA+ R G + ++ +AD+A+ Sbjct: 231 GFKQFLMTLDGGRIGIGAMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAM 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I A + ++ A D+ K ++EAA + K + ++ V ++A++ GG GY Sbjct: 291 KIELARNMVYKAAWLKDQGKPFTKEAA-------MCKLYASEICMEVASQAVQIHGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 ++E + R+ R+ A + +G G + + Sbjct: 344 MKEYHVERYLRD--AKLLEIGEGTSEI 368 >gi|167899585|ref|ZP_02486986.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G V Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E M K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|31791939|ref|NP_854432.1| acyl-CoA dehydrogenase FADE9 [Mycobacterium bovis AF2122/97] gi|121636675|ref|YP_976898.1| putative acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989147|ref|YP_002643834.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|31617526|emb|CAD93636.1| PROBABLE ACYL-COA DEHYDROGENASE FADE9 [Mycobacterium bovis AF2122/97] gi|121492322|emb|CAL70789.1| Probable acyl-CoA dehydrogenase fadE9 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772260|dbj|BAH25066.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 56/317 (17%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ + V LTE G+D A++++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139 Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCY 272 + G Y L G K F+S + SD ++++A+ EG G + ++E G+P GL + Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRG--VSAFVVEKGTP-GLSF 196 Query: 273 QRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDMKIL 315 + K+G + T ++ FG + LN Sbjct: 197 GAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR--------- 247 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A S+ G + + +A Y R R GG L+D+P ++ +AD+A + + L +R Sbjct: 248 --LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWR 305 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A++ D+ + E + + K + V +A++ GG GY+ E + + R Sbjct: 306 AASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVR 359 Query: 436 ESPANSILLGSGNAMVL 452 + + IL G+ M L Sbjct: 360 DLRVHRILEGTNEIMRL 376 >gi|328544490|ref|YP_004304599.1| acyl-CoA dehydrogenase [polymorphum gilvum SL003B-26A1] gi|326414232|gb|ADZ71295.1| Acyl-CoA dehydrogenase [Polymorphum gilvum SL003B-26A1] Length = 565 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 38/307 (12%) Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 +W P++ + E+ T + ++E G+D+ I ++ + DG + ++G K Sbjct: 146 EWIPRLATGEWAAT-------------ICISEPDAGSDVGRIRTRAARAGDG-WTVTGEK 191 Query: 233 WFLSSPMSD-----AFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNR 282 ++S D +LA+ G FLVP DGS N + QR++ K+G Sbjct: 192 IWISFGDHDMTPRIGHCLLARTGDAPGTRGLSLFLVPNTRVDGSANAITVQRIEEKLGLH 251 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 + T L F LLG + M ++ L +A + + A YA R Sbjct: 252 GSPTCALAFEGAEAVLLGAEGRGLPQLFAMIEMMRLSTACQGLGVASGACDTARAYAAER 311 Query: 343 HVSGGILIDQPVMKRAIADI---ALDIAAATAL----SFRLANSFDEAKSRSEEAAYARI 395 GG V A AD+ LD+ A T + LA + D A+ + A A Sbjct: 312 R-QGGDPAAPAVPILAHADVRRQILDMEARTEVLRLAILELATAMDLARCEPDPAVAADH 370 Query: 396 ------MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 M P+ K + + V + A++ +GG+GY E + + R++ SI G+ Sbjct: 371 AAFAAWMLPLAKNFGGETGFDVASRAIQVLGGAGYTREWPVEQALRDTRIVSIYEGTTGM 430 Query: 450 MVLDVLN 456 LD L Sbjct: 431 QALDFLT 437 >gi|325121788|gb|ADY81311.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 383 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 16/242 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ + G + Sbjct: 124 LTEPDAGSDAASLKTTAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNPDIKGTSGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 183 AFIVDSQTPGIFLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A +SV L ++++YA R G + + +++ +AD +I AA + Sbjct: 242 KGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMVL 301 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D ++ S EA+ A++ A +M V ++ GG+GYI E +I R Y Sbjct: 302 DAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYAIERFY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|240168468|ref|ZP_04747127.1| acyl-CoA dehydrogenase FadE5 [Mycobacterium kansasii ATCC 12478] Length = 611 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAF-----IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F++S S D F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ L D G NG+ +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFLFDFETGELGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283 Query: 300 GDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID---- 351 G+++ +E ++++ +++ + A+ YA+ R V G L Sbjct: 284 GEVHNGIAQMFEVIEQARMMV----GTKAIATLSTGYLNALEYAKSR-VQGADLTQMTDK 338 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI------- 395 P ++R++ AL A D A + A++ Sbjct: 339 TAPRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAAKVNDL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 M PI K + A A + E+++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 399 MLPIVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|205375488|ref|ZP_03228276.1| Acyl-CoA dehydrogenase [Bacillus coahuilensis m4-4] Length = 450 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 41/321 (12%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 + T + + + PK+ S EY IG LTE G+D A ++ Sbjct: 122 ITYFGTEKQKQKYLPKLASGEY--------------IGAYCLTEPNAGSDALASKTKAIL 167 Query: 221 ISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 ++G Y L+G K +++ + SD FI+ A+V+G+ ++E G P GL + K Sbjct: 168 NNEGSHYILNGTKIYITNASFSDTFIVYAKVDGQ---HFTAFIVEKGFP-GLVIGPEEKK 223 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333 +G + ++T + + +LG+ + G V + +L + ++ G +L Sbjct: 224 MGIKGSSTCSVLLEDCLVPKENVLGE--IGKGHVIALNVLNLGRYNLGFAAMGGAIHALD 281 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + + + R G + D P K I +A I AA ++ +R D +E A Sbjct: 282 TTMAFIKERKQFGRRISDFPASKEKIIKMAARIFAAESIQYRTGGLLDSRLEGLKENALP 341 Query: 394 RIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + +A I K + + V+ E ++ GG+GYI E I + YR+S N I Sbjct: 342 KEVAAGLMEYIMECAICKVYGSETLDMVVDEGLQLHGGAGYIAEYPIEQMYRDSRINRIF 401 Query: 444 LGSG--NAMVLDVLNLLEKGT 462 G+ N +VL LL+K T Sbjct: 402 EGTNEINRLVLPT-QLLKKLT 421 >gi|89092335|ref|ZP_01165289.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] gi|89083423|gb|EAR62641.1| acyl-CoA dehydrogenase [Oceanospirillum sp. MED92] Length = 389 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 59/317 (18%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 MS + A ++ M T + P I S E+ A LTE G+D Sbjct: 93 MSVTNMVAEVIQAMGTEEQKNKYLPLICSGEF------------AAGSFCLTESGAGSDP 140 Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG----CFLVPRLLED 264 A++ +Q K +DG + +SG K W S+ + F++ A E + G CFLV D Sbjct: 141 ASMRTQAVKTADG-FSISGTKQWITSAEFAGVFVVWAVTDPEAKKGKGITCFLV-----D 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321 G+ + K+G +AT E+ F N +LG LN + ++ A Sbjct: 195 ADAPGITVGPAEKKMGQHGSATNEVHFDNVEVPESAILGKLN------DGFRL------A 242 Query: 322 IMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++G R+ + A Y R G + D ++ IAD ++ AA Sbjct: 243 VAELAGGRIGIGSLALGVGLAAMGYATAYTTERKQFGRPISDFQGLQWTIADRYTELEAA 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A+ + ++EA+ A++ A C A++ +GG GY++E Sbjct: 303 RLLLMSAADRKERGLPFAKEASMAKVFASEKANQACY-------SALQLLGGYGYMQEYP 355 Query: 430 IARHYRESPANSILLGS 446 + R R+ SI G+ Sbjct: 356 LERFARDVRITSIYEGT 372 >gi|300711655|ref|YP_003737469.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] gi|299125338|gb|ADJ15677.1| acyl-CoA dehydrogenase [Halalkalicoccus jeotgali B3] Length = 380 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 27/279 (9%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S + T P+ + L+E G+D+ A+ + ++ + G W + + Sbjct: 103 SEDQKETYLTPLAEGRDVGAFALSEAGAGSDVPAMETTAERDGEEYVIDGGKLWISNGSV 162 Query: 240 SDAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +D ++ A+ + G V R ED G + ++K+G++ T EL FS Sbjct: 163 ADTVVLFAKTDPEAGNRGISSFVVRPEED---EGFLVEGTEHKLGDKGCPTAELRFSEMR 219 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGG 347 LG+ G V+ +K L + ++++ V LA+A YA R G Sbjct: 220 IPESRRLGE--EGEGFVQALKTL---NGGRITIAARGVGLAQAALDDAREYANEREQFGQ 274 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + + +K +AD+ ++AA L + A+ K R EE A K + ++ Sbjct: 275 PIGEFQTIKHKLADMDTKLSAARLLMHQAAD----LKIRDEEFIKEAAQA---KLYASEI 327 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + V EA++ GG GY ++ + R+YR++ N I G+ Sbjct: 328 SREVANEAIQIHGGYGYTKDFDVERYYRDAKLNEIYEGT 366 >gi|299770631|ref|YP_003732657.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298700719|gb|ADI91284.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 383 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V D G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFIV-----DSQTPGIFLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV L ++++YA R G + + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A++ A +M V ++ GG+GYI E + Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|294501279|ref|YP_003564979.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] gi|294351216|gb|ADE71545.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] Length = 379 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-GCFLV 258 GLTE G+D ++ + DG + ++G K ++++ F+ L V R G + Sbjct: 123 FGLTEPNAGSDAGGTETEAV-LKDGTFRINGSKCYITNASYAKFLALTAVTNRTEGKKEI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 ++ G K+G L SNT +L D+ V P E++ Sbjct: 182 SAIIVPTEARGFTVIDNYEKMG--------LHASNTTELVLEDVEV---PEENLLGVRGE 230 Query: 313 ---KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIAL 364 + L+ LD + + M V +A+A + YA+ R G + ++ +AD+A+ Sbjct: 231 GFKQFLMTLDGGRIGIGAMAVGIAQAAYEKALSYAQERKQFGKAISSFQAIQFKLADMAM 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I A + ++ A D+ K ++EAA + K + ++ V ++A++ GG GY Sbjct: 291 KIELARNMVYKAAWLKDQGKPFTKEAA-------MCKLYASEICMEVASQAVQIHGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 ++E + R+ R+ A + +G G + + Sbjct: 344 MKEYHVERYLRD--AKLLEIGEGTSEI 368 >gi|134117393|ref|XP_772923.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255541|gb|EAL18276.1| hypothetical protein CNBK2940 [Cryptococcus neoformans var. neoformans B-3501A] Length = 420 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 31/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253 +TE G+D+A I ++ +K D + L+G K W ++ ++ F +LA + G Sbjct: 160 VTEPGAGSDVAGIKTRAEKKGDK-WVLNGSKMWITNAGHANWFFVLAITDPEASPSRGMT 218 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 G F+V D +G+ + + +G R++ T + F + ++ + NV P E K Sbjct: 219 G-FIV-----DADTDGIILGKKEINMGQRASDTRMVTFEDV---IVPEENVLGSPGEGFK 269 Query: 314 ILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + D VS V LA EA YA+ RH G +I+ + +AD+A+ + Sbjct: 270 IAMKAFDITRPLVSAAAVGLAQRALEEATKYAQERHTMGQPIINHQGVAFMLADMAIGVE 329 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L ++ A + D R YA + K + K A ++ GG+G+ E Sbjct: 330 AARGLVWKAAWAKD---CRQRNTFYAS----MAKAFAGKTAVENANLGVQVFGGAGFNTE 382 Query: 428 RSIARHYRESPANSILLGSGNAMVLDV 454 + + YR++ + G+ L V Sbjct: 383 MPMEKLYRDAKIYELYEGTSQIQKLIV 409 >gi|326329412|ref|ZP_08195736.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325952738|gb|EGD44754.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 55/373 (14%) Query: 97 VEFHPAWHA-------LLRRSIHDGLHC----------SIWDRSFEPVVRKQAHKIRAAR 139 V FH W L +++ GL C I D F V+ ++ KI A+ Sbjct: 28 VPFHDQWEKDGIVPRELWKKAGDTGLLCFDVDEEYGGPGIKDFRFNSVLHEEMAKIGASG 87 Query: 140 LYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 + ++ P ++ + TP W P S + + Sbjct: 88 PGFFVHTD---IIVPYISH------LGTPEQKARWLPGCVSGD-------------IITA 125 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + D Y L+G K F+S+ + +D I++A+ G + Sbjct: 126 VAMTEPGAGSDLQGVRTTAVDKGDH-YLLNGSKTFISNGINADLVIVVAKTNPEAGAHGI 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L+ + G R +K+G ++ T EL F++ LLG+ +G + M +L Sbjct: 185 SLLVVERGMEGFERGRNLDKVGMKAQDTAELSFTDVVVPKENLLGE--EGSGFISLMTLL 242 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A ++V+ + L ++ YAR R G +P+ + L A A Sbjct: 243 PQERISVASIAVAAVEQVLELSLDYARTREAFG-----RPIGRFQNTAFTLAEMATEAYL 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL ++A ++ ++A + K+W ++ + + ++ GG GY+ E IA+ Sbjct: 298 ARLF--LNDAVTQLNAGTADTVLASMAKWWTTELQKKFVDQGVQIHGGYGYMMEYPIAKA 355 Query: 434 YRESPANSILLGS 446 + +S +I G+ Sbjct: 356 FIDSRIQTIYGGT 368 >gi|296282905|ref|ZP_06860903.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium bathyomarinum JL354] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 40/272 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGC 255 + +TE G+D+ +IT+ K +G Y ++G K ++S+ ++D I++A+ E G Sbjct: 126 IAMTEPGVGSDLQSITTTALKDGNG-YKINGAKTYISNGQIADFIIVVAKTDPNERAKGI 184 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------------GF--LLG 300 L+ LLE G + +KIG S T EL F + F GF L+G Sbjct: 185 SLM--LLETEGAEGFQRGKKLDKIGLDSQDTSELFFDDVFVPAENVLGGEEGKGFYQLMG 242 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 +L P E + I A+ ++S + +L E + + + R G + D + +A Sbjct: 243 EL-----PQERLII------AMGAMSTIERALEETLAFTKERKAFGKTIWDFQNTQFTLA 291 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ AA E K A A++ W ++ V+ + ++ G Sbjct: 292 ELKARATAAKVFVNHCIAQHLEGKLDVPTACMAKL-------WLTELQGEVVDKCLQLHG 344 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVL 452 GSGYI + IAR +R+S + I GS M + Sbjct: 345 GSGYINDYPIARMFRDSRVSRIFGGSNEIMKM 376 >gi|46136291|ref|XP_389837.1| hypothetical protein FG09661.1 [Gibberella zeae PH-1] Length = 412 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 21/280 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P T+ L+E G+D A+ ++ + +DG W +S +D FI+ A + Sbjct: 141 PRLATNTVASFCLSEPVSGSDAFAMATRATETADGFKINGSKMWITNSKEADLFIVFANL 200 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 + G + L + G + + K+G R+++T + F + LLG+ Sbjct: 201 DPSKGYKGISAFLVEKGMKGFSIAKKEKKLGIRASSTCVINFDDVEIPKENLLGE----R 256 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-EAIHYARR-----RHVSGGILIDQPVMKRAIA 360 G I I L+ + ++ LA A A R R G ++ + M+ +A Sbjct: 257 GQGYKYAISI-LNEGRIGIAAQMTGLALGAFDNAARYVWNDRKQFGSLVGEFQGMQHQLA 315 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +I AA AL + A + + ++AA A++ + ++A V A+E +G Sbjct: 316 QAYTEITAARALVYTAARKKEAGEDFVKDAAMAKL-------YASQVAGRVSGSAIEWMG 368 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G G++ E +++R+S +I G+ N + + LL+K Sbjct: 369 GMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIAKLLQK 408 >gi|311695369|gb|ADP98242.1| acyl-CoA dehydrogenase family protein [marine bacterium HP15] Length = 586 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/312 (23%), Positives = 123/312 (39%), Gaps = 38/312 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE GTD+ I ++ + DG + ++G K F++ D ++LA++ + Sbjct: 154 MDLTEPHAGTDLGIIRTKAEPNDDGSFNVTGTKIFITWGEHDMAENIIHLVLAKLPDAPK 213 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ L +DGS N L+ K+G + +AT + F G+L+G+ N Sbjct: 214 GPKGISMFLVPKFLVNDDGSLGERNSFSCGSLEKKMGIKGSATCVMNFDGAKGWLVGEEN 273 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA----RRRHVSGG---------ILI 350 + M L I + SL A YA + R +G IL+ Sbjct: 274 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYALDRIQSRAPTGAQQPEKAADPILV 333 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404 P ++R + + + S +A D AK R ++ P+ K + Sbjct: 334 -HPDVRRMLLTMKSYVEGGRTFSTYVAQWLDIAKFAEDDERRKHAEGMVALLTPVAKAFL 392 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GG G+I E + R+ I G+ LD++ GT Sbjct: 393 TDRGLDTCIMGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMGRKVVGTQ- 451 Query: 465 FEQLFSTLEQDL 476 +L+ QD+ Sbjct: 452 -GKLYELFAQDV 462 >gi|188027001|emb|CAQ53135.1| butyryl-CoA dehydrogenase [Clostridium saccharobutylicum] Length = 379 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 GLTE GTD A GQ+ + + Y L+G K F+++ +++ FI+ A + G Sbjct: 123 FGLTEPGAGTDAA-----GQQTTATLEGDHYVLNGSKIFITNGGVAETFIIFAMTDKSQG 177 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 + + + S G +L+NK+G R+++T EL N LLG G Sbjct: 178 TRGISAFVVEKSFPGFSVGKLENKMGIRASSTTELVMENCIVPKENLLGKEGKGFGIA-- 235 Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK LD + ++ + +A EA+ Y + R L ++ IA++ + I Sbjct: 236 MKT---LDGGRIGIAAQALGIAEGAFEEAVAYMKERKQFNKPLSAFQGLQWYIAEMDVKI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L ++ A + S +AA A++ A +A V +A++ GG GY + Sbjct: 293 DAAKHLVYKAACKKQAGQPYSVDAARAKLFA-------ADVAMEVTTKAVQIFGGYGYTK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 346 EYPVERMMRDAKITEIYEGT 365 >gi|23500196|ref|NP_699636.1| acyl-CoA dehydrogenase [Brucella suis 1330] gi|23463798|gb|AAN33641.1| acyl-CoA dehydrogenase [Brucella suis 1330] Length = 375 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G +++K+G S+ T L F+N + L E Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEG---EGY 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + R A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 291 ETARQMVLRAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYLA 343 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 344 DYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|312139398|ref|YP_004006734.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325672719|ref|ZP_08152415.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311888737|emb|CBH48049.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325556596|gb|EGD26262.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 381 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 38/280 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ K D + L+G K F+++ + +D I++A + G Sbjct: 124 IAMTEPGTGSDLQNIKTRAVKDGDH-WILNGAKTFITNGINADLVIVVACTDPDKGAQGF 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG ++ T EL F++ F +L+ +L Sbjct: 183 SLLVVERGMEGFERGRNLDKIGLKAQDTAELSFTDVRVPAENLLGEEGMGFIYLMQNL-- 240 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I A+++ + M L I Y R R G + + +A++A Sbjct: 241 ---PQERLSI------AVVAAAAMESCLDMTIQYCRDRKAFGKSIGSFQNTRFVLAELAT 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A L + + K +EAA A K+W + +I ++ GG GY Sbjct: 292 ETTAVRVLVDKFIEQLNAGKLSVQEAAMA-------KWWTTEAQVKLIDRCLQLHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + E IA+ Y +S +I G+ M ++ +G NL Sbjct: 345 MREYPIAKAYMDSRVQTIYGGTTEIMK----EIIGRGLNL 380 >gi|167840719|ref|ZP_02467403.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 387 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 16/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE----GRVG 254 L +TE GG+D+AA+ + + D Y ++G K F++S + +D + + + + G G Sbjct: 127 LAITEPGGGSDVAALRTSAMRDGD-RYVVNGEKVFITSGIRADYYTVAVRTDPGALGAKG 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 L+ L+EDG+P GL LK K+G ++ T L F + L+G V Sbjct: 186 LSLL--LVEDGTP-GLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALVMQ 241 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L A ++ +V +A+ +AR+R G + D V++ + D+A+ I A A Sbjct: 242 NFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHKLVDMAMRIGATRA 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D R+ E M K + + A++ +GG GY+ Sbjct: 302 WLEQCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPE 358 Query: 432 RHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 359 RIYREVKVNMIGGGAEEIM 377 >gi|237509158|ref|ZP_04521873.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] gi|235001363|gb|EEP50787.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei MSHR346] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G V Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFEDCRVPAANLIGPEGGGFALVMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E M K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|218196010|gb|EEC78437.1| hypothetical protein OsI_18277 [Oryza sativa Indica Group] Length = 357 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K+ DG Y ++G+K W + P + ++ A+ + G + Sbjct: 137 LAMSEPNSGSDVVSMKCKAEKV-DGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGI 195 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G P Q+L +K+G R + T EL F N F L V M + Sbjct: 196 TAFIIEKGMPGFSTAQKL-DKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLD 254 Query: 318 LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ +++ + M+V L A+ Y R+R G + + ++ +AD+ + ++ + + Sbjct: 255 LERLVLAAGPIGLMQVCLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVY 314 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +A D K ++ A + A + A V +A++C+GG+ Sbjct: 315 SVARDCDNGKVDRKDCAGVILFAA-------ERATQVALQAIQCLGGT 355 >gi|76801952|ref|YP_326960.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160] gi|76557817|emb|CAI49401.1| acyl-CoA dehydrogenase 1 [Natronomonas pharaonis DSM 2160] Length = 387 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 43/307 (14%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTPRVH------KDWAPKIFSREYDPTNKAPMQKTS 195 LM +LEAG S+ S +M + ++W PK+ E Sbjct: 77 LMQELEAGDSGLRSMASVQGALVMYPIHAYGSEAQKEEWLPKLGQGE------------- 123 Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----V 249 A+G GLTE G++ +A+ + + DG Y L+G K W +SP+SD ++ A+ Sbjct: 124 -AVGCFGLTEPEHGSNPSAMETHAEADGDG-YVLNGAKTWITNSPISDVAVVWARDRSAD 181 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + V FLV + +G+ ++ +K+ R++ T E+ ++ + +L ++ Sbjct: 182 DTPVRGFLV-----ETDRDGVTTNKITDKLSLRASITGEIGLNDVYVPEENVLPGVSGMK 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 GP+ + Y A +V R + EA YA R GG + + + +A++A I Sbjct: 237 GPLSCLTQARY-GIAWGAVGAARDAFEEARQYATDRDQFGGPIGRFQLQQDKLAEMATQI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A L++RLA + R + + ++K +MA A E +GG+G Sbjct: 296 TLAQLLAYRLAELKERGDMRPQHVS-------MSKRNNVRMARNQARIAREMLGGNGITT 348 Query: 427 ERSIARH 433 + S RH Sbjct: 349 DYSPMRH 355 >gi|332559771|ref|ZP_08414093.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N] gi|332277483|gb|EGJ22798.1| glutaryl-CoA dehydrogenase [Rhodobacter sphaeroides WS8N] Length = 403 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K ++G Y L G K W ++P++D F++ A+ E G++ Sbjct: 145 FGLTEPDAGSDPAGMKTVARKSAEG-YVLHGSKMWISNAPIADVFVVWAKSEAHGGKIRG 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F +LE G GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 204 F----VLEKGM-KGLSAPKIGGKLSLRASITGEIVME---GVEVGEEALLPG-VEGLKGP 254 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +H AR+ R G L + + +A++ DIA Sbjct: 255 FGCLNRARYGISWGVLGAAEACLHAARQYGLDRRQFGRPLAQTQLYQLKLANMMTDIALG 314 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A A + GG+G EE Sbjct: 315 AQASLRVGRLLDEANAAPE-------MISIVKRSNCGKALEAARHARDMHGGNGIQEEFH 367 Query: 430 IARH 433 + RH Sbjct: 368 VMRH 371 >gi|296444960|ref|ZP_06886922.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] gi|296257628|gb|EFH04693.1| acyl-CoA dehydrogenase domain protein [Methylosinus trichosporium OB3b] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P++D I+ A+ E G + Sbjct: 130 LAMSEPGAGSDVVNMSMRAEKRGD-RYILNGEKMWVTNGPIADVVIVYAKTEPAAGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G+ R +K+G R + T EL + N G +NV ++ Sbjct: 189 TAFIVEKRFKGVAAARKLDKLGMRGSDTCELFLTDCEVPEENVLGVAERGVNVLMSGLDY 248 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A + MR L + Y R G + + +M+ +AD+ + AA A Sbjct: 249 ERCVL----AGGPIGIMRACLDIVVPYVHDRKQFGQPIGEFQIMQAKLADMYTTLNAARA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ ++AA A + A + A + EA++C+GG+GYI + Sbjct: 305 YVYAVAKACDRGRTTRKDAAGAILFA-------AEHATRMALEAIQCLGGNGYINDYPTG 357 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 358 RLLRDAKLYEIGAGT 372 >gi|239942583|ref|ZP_04694520.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239989044|ref|ZP_04709708.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291446045|ref|ZP_06585435.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291348992|gb|EFE75896.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 608 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ I +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356 + G + +I+ + + +++ + A+ YA+ R V G L +D+ K Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399 I D+ +L A A R + ++ E ++ E+A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + + +A++++ GGSGY++E + ++ R++ +++ G+ D Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460 Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509 + ++G +L +TL +++ G+ G + + DS++ D + +T+ A Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAQGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515 Query: 510 LASSAAALYRAGMN 523 +Y+ G+N Sbjct: 516 TGEDVKNIYKVGLN 529 >gi|163760525|ref|ZP_02167606.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43] gi|162282140|gb|EDQ32430.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43] Length = 404 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ +K SDG Y L G K W ++P++D F++ A+ E G + Sbjct: 146 FGLTEPDAGSDPGGMKTRARK-SDGGYVLHGSKMWISNAPIADVFVVWAKSEAH-GGEIR 203 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ N LL +++ GP Sbjct: 204 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP------F 256 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y RH G L + ++ +AD+ +IA Sbjct: 257 GCLNRARYGISWGVMGAAEDCWYRARQYGLDRHQFGKPLAGTQLYQKKLADMQTEIALGL 316 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ DE + +A M I K C A + A + GG+G E + Sbjct: 317 QGSLRVGRLMDEHR-------FAPEMISIVKRNNCGKALDIARMARDMHGGNGIQAEYHV 369 Query: 431 ARH 433 RH Sbjct: 370 MRH 372 >gi|115372054|ref|ZP_01459366.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca DW4/3-1] gi|115371019|gb|EAU69942.1| acyl-CoA dehydrogenase family protein [Stigmatella aurantiaca DW4/3-1] Length = 539 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 51/391 (13%) Query: 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKI---RAARLYLMA-QLEAGHLMSPSVTSA 159 H L+R+ + + S P V Q + A YLMA L A + ++ +A Sbjct: 17 HPLMRKLYPQLVELGLLTASRPPEVGGQQLPLTLYSMASAYLMAANLSAYAYVGLTIGAA 76 Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 ++ TP + + + +++ E+ T + LTE + G+ + + ++ Sbjct: 77 HLLEAFGTPWLREQFMTRMYRGEWTGT-------------MALTEPQAGSSLGDVKARAF 123 Query: 220 KISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLEDGS-- 266 DG Y +SG K F+S D + LA++EG + F VP +G Sbjct: 124 PAEDGSYRISGSKIFISGGDQDFTENVVHLTLARIEGAPPGTRGISLFAVPSRRPEGDRL 183 Query: 267 -PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 N + + +KIG R ++ L + + G+L+G+ N + M + + Sbjct: 184 VDNDVRVAGVIHKIGWRGMPSLALNYGEEGDCRGWLVGEANRGLACMFQMMNEARIMVGL 243 Query: 323 MSVSGMRVSLAEAIHYARRR---HVSGGILIDQP--------------VMKRAIADIALD 365 V+ V+ EA+ YAR R +G QP + ++AI + L Sbjct: 244 NGVATASVAYHEALAYARSRPQGRSAGAKDALQPQTPIIEHADVRRMLLRQKAIVEGGLS 303 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AAT++ LA + ++R ++ P+ K + + A++ GG GY Sbjct: 304 LLAATSVQADLAAHSPDEETRKRAGLLLDLLTPVAKTFPAEKGFEANVLALQVHGGYGYS 363 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLN 456 E R+ NSI G+ LD+L Sbjct: 364 SEYLPEAWLRDQKLNSIHEGTTGIQGLDLLG 394 >gi|111219571|ref|YP_710365.1| acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111147103|emb|CAJ58748.1| acyl-CoA dehydrogenase [Frankia alni ACN14a] Length = 667 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/355 (21%), Positives = 161/355 (45%), Gaps = 63/355 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S P + ++LA+ EG Sbjct: 215 LTEPDAGSDVGAGRTRAVEQPDGTWHIEGVKRFITSGDWDVPENIIHLVLARPEGHGPGT 274 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ + D G NG+ ++ K+G + +AT EL F G+L+GD Sbjct: 275 KGLSMFVVPKFMPDPATGEPGERNGVYVTNIEKKMGLKVSATCELSFGERTPAVGWLVGD 334 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349 V G + +++ Y + +++ + A+ +AR R V G L Sbjct: 335 --VHEGIAQMFQVIEYARMMVGTKAIATLSSGYLNALDFARTR-VQGADLTRSTDKTAPR 391 Query: 350 ---IDQP------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAP 398 I+ P ++++A A+ + TA +F+ + A+ ++E A ++ P Sbjct: 392 VEIINHPDVRRMLMLQKAYAEGMRSLVLYTA-TFQDRVAQAAARGGNDELAVRINDLLLP 450 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 I K + + +++ +++ GGSGY+++ I ++ R++ +++ G+ + Sbjct: 451 IVKGVGSERSYELLSTSLQIFGGSGYLQDYPIEQYIRDAKIDTLYEGTTSI--------- 501 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASS 513 +G +LF F + +D G+ + +L + + K + G E+ L ++ Sbjct: 502 -QGQDLF---FRKIVRD---RGQALTAVLGEIQTFVKAEAGNGALQYEREVLGAA 549 >gi|111019862|ref|YP_702834.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819392|gb|ABG94676.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 383 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 39/308 (12%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + + PK+ + E T + LTE GG+D+ Sbjct: 86 MGGHTVVAKLLSLYGTEEQKRQYLPKLATGEIRAT-------------MALTEPGGGSDL 132 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRLLEDG 265 A+++ + D + +SG K ++S+ I L A G +V L+E G Sbjct: 133 QAMSTNAKTDGDDL-VISGSKTWISNARRSGLIALLCKTDPAASPKHKGISIV--LVEHG 189 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDS 320 GL R K+G + T EL F N + +LG G + MK L + Sbjct: 190 P--GLTVSRDLPKLGYKGVETCELSFDNYRISSDAVLGG-TAGKGFAQMMKGLETGRIQV 246 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A ++ +L +++ YA++R G + + +AD+A + AA L++ A + Sbjct: 247 ACRALGVATAALEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQY 306 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D EA A++ A ++A + A+ GG GY E + R++R++P Sbjct: 307 DSGDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL- 358 Query: 441 SILLGSGN 448 +++G G Sbjct: 359 -MIVGEGT 365 >gi|23100466|ref|NP_693933.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22778699|dbj|BAC14967.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 32/258 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D +++ + + I D +Y L+G K F+++ +D +I A+ G + Sbjct: 124 LTESGSGSDASSMKTTAKLIDD-MYVLNGSKVFITNGGEADTYITFART-GDSPKDISAF 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVSTGP 308 ++E +P G + + K+G + TVE+ F N GF + N++ G Sbjct: 182 IVEKDAP-GFIIGKKEKKMGLHGSNTVEIIFENCRIPKENLLGERGKGFKIAMANLNIGR 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + A + +L A+ YA+ R G + + +A++A ++ + Sbjct: 241 I---------GIAAQGLGIAEAALNYAVTYAKEREQFGKPIAANQGISFKLAEMATNVES 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A + K +EA+ A++MA T M A+ EA++ GG GY +E Sbjct: 292 AKLLTYQAAALIEAGKQCGKEASMAKMMATKTA-----MNNAI--EAVQVFGGYGYTKEY 344 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 345 PVERLFRDAKVTEIYEGT 362 >gi|333007686|gb|EGK27163.1| protein aidB domain protein [Shigella flexneri VA-6] Length = 134 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 7/136 (5%) Query: 15 VHQPSDSLFALNQPPLFIGMNAYSSDSLLV-ALIANFPSVVHKELELLGEYVLSCTAQEL 73 +H + ++F NQP N Y SD L A+ L +G+ + + + EL Sbjct: 1 MHWQTHTIF--NQPIPLNNSNLYLSDGALCEAVTREGAGWDSNFLASIGQQLGTAESLEL 58 Query: 74 ARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAH 133 R+AN N P+L Y G R D V FHPAWH L++ + +H W E R A Sbjct: 59 GRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAW----EEDARSGAF 114 Query: 134 KIRAARLYLMAQLEAG 149 RAAR L +L G Sbjct: 115 VARAARFMLHGRLRLG 130 >gi|239994076|ref|ZP_04714600.1| Acyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 599 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 38/298 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGR 252 LTE G+D+ + + + DG Y L+G K F+S+ D I+LA++ EG Sbjct: 164 LTEAHCGSDLGMLKCRAEPQEDGTYSLTGTKIFISAGEHDLSENIVHIVLARLPDAPEGT 223 Query: 253 VGC--FLVPR--LLEDGSP---NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G F+VP+ + EDG N + +++K+G +++AT + F G+L+G N Sbjct: 224 KGISLFVVPKFNVSEDGEKQDRNAVGCGSIEHKMGIKASATCVINFDGAKGYLIGPPNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQP-------- 353 + + + + ++ + A+ YA+ R ++G D P Sbjct: 284 LNCMFTFMNTARIGTGLEGLASSEAAFQGALRYAKDRIQFRSLTGRKNPDGPADPIIVHP 343 Query: 354 ------VMKRAIADIALDIAA--ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 + ++A A+ +AA + L S DEA+ + +A A + PI K + Sbjct: 344 DVRRMLLTQKAFAEGNRALAAYCMQLVDVTLYGS-DEAEKQLADAKLA-FLTPIVKAFLT 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + A + M+ GG G+I+E + + R++ ++ G+ +D+L G+N Sbjct: 402 ETAQEATSYGMQVYGGHGFIKEWGMEQLARDTRICTMYEGTTGIQAVDLLGRKVMGSN 459 >gi|56418980|ref|YP_146298.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|56378822|dbj|BAD74730.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] Length = 398 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+A+I + + D Y L+G K W + ++D F++ A + + Sbjct: 123 FGLTEPNAGSDVASIQTTAVRDGDD-YILNGQKTWISLADIADHFLVFAYTDKSKKHRGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R + G + +K K+G RS T EL F N + N+ E K Sbjct: 182 SAFIVERTMP-----GFSSRPIKGKLGIRSGNTGELFFDNV---RVPKENLLGEEGEGFK 233 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ +V+ V L A + Y R G + ++++ IA + + Sbjct: 234 IAMSALDNGRFTVAAGAVGLIMACLEASVKYCHERKTFGKEIGRHQLVQQMIARMEAGLQ 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L +++ +E + + E + A+ +A C A +A++ G GY E Sbjct: 294 ISRLLVYKVGFLKNEGRRCTRETSLAKWIA-------CDYANQAADDAVQIHGAYGYSNE 346 Query: 428 RSIARHYRESPANSILLGS 446 + R+ R S A I G+ Sbjct: 347 YPVERYLRNSKAPVIYEGT 365 >gi|329960099|ref|ZP_08298563.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057] gi|328533051|gb|EGF59824.1| acyl-CoA dehydrogenase protein [Bacteroides fluxus YIT 12057] Length = 567 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/289 (20%), Positives = 134/289 (46%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + ++ + L+G K F+++ ++ ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEANNCWRLNGVKRFITNGDANLHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D + G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKNEGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R G +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFGKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ + D K+ R E+ Y+++ P+ K + A Sbjct: 347 SLLYQTSRYVDIYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DSIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|261415356|ref|YP_003249039.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371812|gb|ACX74557.1| acyl-CoA dehydrogenase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325383|gb|ADL24584.1| acyl-CoA dehydrogenase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 570 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 24/287 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + +D + L+G K F+++ SD ++LA+ E G Sbjct: 172 MSMDLTEPDAGSDLQRVMLKATYSEADKCWYLNGVKRFITNGDSDIHLVLARSEEGTHDG 231 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L G G ++ + L Sbjct: 232 RGLSMFIYDKRDGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGRRKF--GLIKYVMAL 289 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV +++ EA+ YA+ R G +++ P + I++I + A AL Sbjct: 290 MNGARLGIAAQSVGISQMAYNEALAYAKDRKQFGQAIVNFPAVYEMISNIKARLDAGRAL 349 Query: 373 SFRLANSFDEAK--------------SRSEEAAYARIMA---PITKYWCCKMAPAVIAEA 415 ++ A D K + E Y ++ + P+ K + A + Sbjct: 350 LYQTARYVDIYKCLEDIERTRKLTDDEKKELKLYQKLASACTPLAKGMNSEYANQNSYDC 409 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 ++ GGSGY+ E + R YR++ SI G+ + L + G+ Sbjct: 410 IQVHGGSGYMLEYACQRLYRDARITSIYEGTTQLQTVAALPHITTGS 456 >gi|126437250|ref|YP_001072941.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126237050|gb|ABO00451.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T++ ++ D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLTTRAERDGDS-YVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ D G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSE 242 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A + S + L + + R R G LI + ++ +A++A + A + + Sbjct: 243 RVGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHV 302 Query: 377 AN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + E +A+ A W V +A++ GG GY+ E + R YR Sbjct: 303 VERQLSGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 356 D--MRILGIGGGTTEILTAL 373 >gi|288959958|ref|YP_003450298.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510] gi|288912266|dbj|BAI73754.1| isovaleryl-CoA dehydrogenase [Azospirillum sp. B510] Length = 390 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + G + Sbjct: 131 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGTKMWITNGPDADTLVIYAKTDLAAGPRGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + + + N+ G + +L+ Sbjct: 190 TAFLVEKGFKGFSVAQKLDKLGMRGSNTGELVFEDC---EVPEENILGGVGRGVNVLMSG 246 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD ++G + + +A I Y R G + + +M+ IAD+ + AA A Sbjct: 247 LDYERAVLAGGPLGIMQACMDVVIPYVHDRKQFGQPIGEFQLMQGKIADMYTVMNAAKAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA A + + W EA++ +GG+GYI E R Sbjct: 307 VYTVAKACDRGETTRKDAAAAILYSAEKATWMA-------LEAIQTLGGNGYINEYPTGR 359 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 360 LLRDAKLYEIGAGT 373 >gi|86749241|ref|YP_485737.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86572269|gb|ABD06826.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + DG Y L+G K F+S ++ ++ G G + Sbjct: 125 LTEPGSGSDAAALRTRA--VIDGDHYVLNGQKQFISGAGANDLYVVMVRTGGDGPGGIST 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 L+ D GL + + K+G + T + F N LGD + KI + Sbjct: 183 LVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIG------FKIAMA 236 Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ S+ G + +L++A+ Y + R G L + ++ +AD+A ++ AA Sbjct: 237 GLDGGRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAART 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L +R A + D + A A + + K + V +A++ GG GY+ E + Sbjct: 297 LLWRAAAALD------RKDADATKLCAMAKRFATDTGFNVANDALQMHGGYGYLAEYGVE 350 Query: 432 RHYRESPANSILLGSGNAMVLDV-LNLLEK 460 + R+ + IL G+ M L V LLE+ Sbjct: 351 KIVRDLRVHQILEGTNEIMRLIVSRKLLEE 380 >gi|114562518|ref|YP_750031.1| butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400] gi|114333811|gb|ABI71193.1| Butyryl-CoA dehydrogenase [Shewanella frigidimarina NCIMB 400] Length = 385 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ + D Y ++G K F+S +++ G G + + Sbjct: 124 LTEPGAGSDAASLQTKAVRDGDD-YLITGSKMFISGAGETELLVVMCRTGEAGPKGISAI 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 G+ Y + ++K+G + T + F N LLG+ G MK L Sbjct: 183 AVPADAAGVTYGKAEDKMGWNAQPTRLISFENVRVPAANLLGE--EGQGFTFAMKGLDGG 240 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ A S+ + +L A Y R G L ++ +AD+A ++ AA + RL Sbjct: 241 RINIATCSIGTAQAALTRATEYMNERKQFGKPLAAFQALQFKLADMATELVAARQM-VRL 299 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A +F E +AY + K + + V A++ GG GYI E + RH+R+ Sbjct: 300 A-AFKLDTQDPEASAYC----AMAKRFATDVGFQVCDGALQIHGGYGYIREYPLERHFRD 354 Query: 437 SPANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 355 VRVHQILEGTNEIMRL 370 >gi|325123539|gb|ADY83062.1| putative acyl coenzyme A dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 387 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 27/318 (8%) Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAI-GLGL 202 L AG M+ + + ++LM VH AP I F E + P + I L + Sbjct: 74 LLAGVEMAKAGSGGVHISLM----VHTIGAPPIQHFGSEELKSKVLPRIISGEKISALAI 129 Query: 203 TEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVP 259 TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G + Sbjct: 130 TEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGIS 187 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 LL D G+ LK K+G ++ T L F LLG N + + + Sbjct: 188 MLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNME 246 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 247 RFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEET 306 Query: 377 ANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A + K + E + + +A T +C A++ +GG G++ R Sbjct: 307 AWKMTQQKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKSER 359 Query: 433 HYRESPANSILLGSGNAM 450 YRE N I G+ M Sbjct: 360 IYREVKVNMIGGGAEEIM 377 >gi|312889455|ref|ZP_07749007.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] gi|311298007|gb|EFQ75124.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] Length = 596 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/294 (21%), Positives = 127/294 (43%), Gaps = 56/294 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257 LTE G+D + ++ + ++G Y ++G K W + +D F++ A+++ + F+ Sbjct: 150 LTEPNSGSDANSGRTKAKLNAEGTHYLITGQKMWITNGGFADVFVVFAKIDDDANLSAFI 209 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V + G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 210 VEKAF-----GGISMNPEEHKLGIKGSSTRQVFFNDCPVPVENLLSERQNGFKIAVNILN 264 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358 + I L +A + S R++L A+ Y+ R + P+ ++ Sbjct: 265 IGR---------IKLGAAAIGSS--RMALNYAVKYSNER-----VQFKLPISKFGAIRYK 308 Query: 359 IADIALDIAAATALSFRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCK 406 IA++A I A + ++R + D+A K++ + + I K W + Sbjct: 309 IAEMATRIYAVESAAYRAGQNIDDAYEALHASGMDLAKAKLKSTEQFAVECAILKVWGSE 368 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 M V+ E ++ GG GY E + R YR+S N I G+ + ++++L K Sbjct: 369 MLDYVVDEGLQVYGGMGYSAEAPMERAYRDSRINRIFEGTNEINRMLIVDMLLK 422 >gi|262371050|ref|ZP_06064372.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter johnsonii SH046] gi|262313936|gb|EEY94981.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter johnsonii SH046] Length = 593 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 49/317 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI+S E+ T + LTE GTD+ I ++ ++ DG Y ++G K Sbjct: 150 YLPKIYSGEWSGT-------------MCLTEPHAGTDLGIIKTKAERNEDGTYNITGTKI 196 Query: 234 FLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKN 277 F++ D ++LA+ + F+VP+ L + G N +++ Sbjct: 197 FITGGDHDLAENIIHLVLAKTPDAPAGSRGISLFIVPKFLVNADGSVGERNAAGPGSIEH 256 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 K+G +++AT + F G+L+G N + M L I + + A Sbjct: 257 KMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMGIQGLGASEFAYQNAAQ 316 Query: 338 YA----RRRHVSG---------GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 YA + R SG IL+ V +R + + + A+ A + + D K Sbjct: 317 YATDRLQGRSASGVQSPAKPADSILVHGDV-RRMLLNARANNEASRAFAVYVGQQLDITK 375 Query: 385 SRSE----EAAYARI--MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 ++ +AA R+ + PI K + A +A GG GYI E + + R+ Sbjct: 376 FSTDPEAVKAANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHGYIREWGMEQCVRDLR 435 Query: 439 ANSILLGSGNAMVLDVL 455 I G+ D++ Sbjct: 436 IAQIYEGTNGVQSQDLI 452 >gi|255037301|ref|YP_003087922.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950057|gb|ACT94757.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM 18053] Length = 604 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 44/290 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257 LTE G+D + ++ + DG Y + G K W + +D FI+ A++E G+ L Sbjct: 153 LTEPDSGSDANSGKTKARLSGDGTHYVIDGQKMWITNGGFADVFIVFAKIEENGQTDKNL 212 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 ++E S G+ ++K+G + + T +L F+ D V PVE+M Sbjct: 213 TAFIIEK-SFGGITMNEPEHKMGIKGSDTRQLFFN--------DCRV---PVENMLSERG 260 Query: 313 ---KILIYL-------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 KI + + +A RV+ ++AI YA R G + + +K +A++ Sbjct: 261 NGFKIAVNILNIGRIKLAAAALGGAKRVA-SQAIQYANERKQFGTAIANFGAIKHKLAEM 319 Query: 363 ALDIAAATALSFRLANSFDEA----KSRSEEAAYARIMA--------PITKYWCCKMAPA 410 A+ + A + ++R+ + D+ K + A A++ A I K ++ Sbjct: 320 AVQMFATESAAYRVGQNIDDLIQAFKEKGMNDAEAKLKALEEFAIECAIMKVHGSEVLDF 379 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V+ E ++ GG G+ + + R YR+S N I G+ L V+++L K Sbjct: 380 VVDEGVQVYGGMGFSADAPMDRAYRDSRINRIFEGTNEINRLLVVDMLLK 429 >gi|209551947|ref|YP_002283863.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539540|gb|ACI59471.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 381 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 126/262 (48%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA++++ +++++G + L+G K F+S SD ++++A+ G G P+ Sbjct: 124 LTEPGAGSDAAALSTKAERVTNG-WRLNGAKAFISGGGYSDIYVVMART-GEAG----PK 177 Query: 261 -----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 ++E G+P GL + L+ K+G ++ T +++F + FG L+G+ + + Sbjct: 178 GISAFVVEKGTP-GLSFGALEKKMGWKAQPTAQVQFDDCIVPFGNLIGEEGRGFSYAMAG 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ ++ I A ++ G + + +++ Y R G L ++ +AD+ + + Sbjct: 237 LDGGRLNI----AASALGGAQTAFEQSLRYMGERKAFGQTLDRLQALQFRVADMETKLQS 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L + A D+A A A + K A V + ++ GG GY+ + Sbjct: 293 SRVLLRQAAWKLDQA------APDATKFCALAKLHVTDAAFDVANQCLQIHGGYGYLADY 346 Query: 429 SIARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 347 GIEKLVRDLRVHQILEGTNEIM 368 >gi|159044900|ref|YP_001533694.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157912660|gb|ABV94093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 406 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K G Y L+G K W +SP++D F++ A+ E G++ Sbjct: 148 FGLTEPDAGSDPAGMKTRAEKTPTG-YRLTGSKMWISNSPIADVFVVWAKSEAHGGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F +L+ G+P GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 207 F----VLDKGTP-GLSAPKVGGKLSLRASVTGEIVMD---GVEVGEDALLPG-VEGLKGP 257 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A + + +E A Y RH L + ++ +AD+ +IA Sbjct: 258 FGCLNRARYGIGWGVMGASEFCWHAARQYGLDRHQFKRPLAQTQLFQKKLADMQTEIALG 317 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R+ DE ++ E M + K C A + A + GG+G EE Sbjct: 318 LQAALRVGRLMDEGRAAPE-------MISLLKRNNCGKALEIARAARDMHGGNGISEEFQ 370 Query: 430 IARH 433 + RH Sbjct: 371 VMRH 374 >gi|291230666|ref|XP_002735282.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain-like [Saccoglossus kowalevskii] Length = 422 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 33/262 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--------EG 251 G+TE GG+D+A I ++ +K D Y ++G K W +S ++ + +LA+ G Sbjct: 157 GVTEPGGGSDVAGIRTRAEKKGDH-YVINGQKMWITNSGYANWYFVLARTSTDPKQPASG 215 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNV 304 F+V R +P GL R + +G RS+ T + F + LLG+ + Sbjct: 216 AFTGFIVDR----DTP-GLTPGRKEWNMGQRSSDTRGITFEDVVVPKENVLLGEGAGFKI 270 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + G + + + A +V R +L EA Y+ R G ++ + + +A++A+ Sbjct: 271 AMGAFDKTRPPV----AAGAVGLARRALDEATKYSLERRTMGKLIAEHQAVAFMLAEMAI 326 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I ++ ++ +R A DE + + A+ A+ +A C +A++ GG G+ Sbjct: 327 GIESSRSMVYRAALQTDEGERNTYYASIAKALAADVANKCA-------TDAVQIFGGYGF 379 Query: 425 IEERSIARHYRESPANSILLGS 446 + + + R++ I G+ Sbjct: 380 NSDYPVEKLMRDAKIFQIYEGT 401 >gi|162449436|ref|YP_001611803.1| acyl-coenzyme A dehydrogenase, short/branched chain [Sorangium cellulosum 'So ce 56'] gi|161160018|emb|CAN91323.1| acyl-Coenzyme A dehydrogenase, short/branched chain [Sorangium cellulosum 'So ce 56'] Length = 388 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 28/274 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ ++ D + L+G K W ++ S F++ A V+ G + Sbjct: 128 LSEAGSGSDAFALAARAERRGD-RWILNGRKLWITNANESSVFLVFANVDPTKGYKGITA 186 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKIL 315 + + S G + +NK+G R+++T EL +L D V G V + KI Sbjct: 187 FVVERSFPGFSVGKKENKLGIRASSTCEL--------VLEDCEVPEGNVIGEVGKGYKIA 238 Query: 316 I-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + + + LA A+ Y R G + ++ A +A++I AA Sbjct: 239 IETLNEGRIGIGAQMLGLAAGAFDHAMRYMGERKQFGQSIASFQGVQFQYARVAMEIEAA 298 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A D + +EAA A++ A ++A + +E +GG G+ ++ Sbjct: 299 RLLVYNAARLKDAGQPFVKEAAMAKLFA-------SEVAERTASLCIEFMGGVGFTKDYP 351 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + + YR++ I G+ N + + LL+ G + Sbjct: 352 VEKLYRDAKIGKIYEGTSNMQLSTIAKLLQAGYD 385 >gi|111224259|ref|YP_715053.1| acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a] gi|111151791|emb|CAJ63511.1| Acyl-CoA dehydrogenase, long-chain specific [Frankia alni ACN14a] Length = 380 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 40/301 (13%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI 225 +H D SR D KA P + AI + +TE G+D+ I +Q + D Sbjct: 90 LHNDVVGSYLSRLPDDEQKARWLPGFASGEAIWAIAMTEPGAGSDLQGIRTQAVRDGDD- 148 Query: 226 YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + +SG K F+++ + SD I++A+ + G + L+ + G R +KIG + Sbjct: 149 WLVSGAKTFITNGIHSDYVIVVARTDPAAGSRGISLLVVERDMPGFSRGRNLDKIGLHAQ 208 Query: 285 ATVELEFS-------NTFGFLLGDLN--VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 T EL F N G L G + P E + I AI +V+G R Sbjct: 209 DTAELFFDAVRVPARNVLGRLGGGFVHLMENLPEERLSI------AISAVAGARAVFDST 262 Query: 336 IHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFR-LANSFDEAKSRSEE 389 + Y + R G QP+ + +A++A +I A R L SF+E + Sbjct: 263 LEYTKTRTAFG-----QPIGGFQHSRFLLAELATEIDIAQVYIDRCLKASFEEKLTT--- 314 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 + A K+W ++ V+ ++ GG GY+ E +A+ + ++ +I G+ Sbjct: 315 -----VDASKAKWWATELQQKVVDRCLQLHGGYGYMTEYPVAKAFTDARIQTIYGGTTEI 369 Query: 450 M 450 M Sbjct: 370 M 370 >gi|108801269|ref|YP_641466.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870420|ref|YP_940372.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108771688|gb|ABG10410.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696509|gb|ABL93582.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T++ ++ D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLTTRAERDGDS-YVVNGAKTYITSGVRADYVVTAVRTGGPGAGGVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ D G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLIGAENTGFLQIAGAFVSE 242 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A + S + L + + R R G LI + ++ +A++A + A + + Sbjct: 243 RVGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRVDVARVYTRHV 302 Query: 377 AN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + E +A+ A W V +A++ GG GY+ E + R YR Sbjct: 303 VERQLSGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 356 D--MRILGIGGGTTEILTAL 373 >gi|86139222|ref|ZP_01057792.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85824066|gb|EAQ44271.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 380 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 23/260 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFL 257 LG+TE GG+D+A + + ++ DG + L+G K F++ M SD F++ A+ G+ G Sbjct: 125 LGVTEPGGGSDVANLKTTARR--DGNHWVLNGSKTFITGGMTSDYFVIPARTGGQ-GLDG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIG--NRSNATVEL-EFSNTFGFLLGDLNVSTGPVEDMKI 314 + + G L K+G AT+ L E ++GD TG + M Sbjct: 182 ISLFFVEADTAGFSRSALTRKMGWWCSDQATLFLDEVRVPASNMMGD--EGTGFLAIMNN 239 Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 I L + ++ + M+ L ++I +A+ R G LI V++ IAD++ I A Sbjct: 240 FNMERINLIAGVLGM--MKTCLEDSIAWAQERETFGKKLIRHQVIRHKIADMSARIDAVE 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + ++ E + A+ A +C +EAM+ +GG+GY+ + Sbjct: 298 ATLRMICWQVNQGDMPVAELSKAKFFATKACEFCA-------SEAMQILGGAGYLRGNRV 350 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE +I GS M Sbjct: 351 ERIYREVKVMAIGGGSEEIM 370 >gi|319953442|ref|YP_004164709.1| glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] gi|319422102|gb|ADV49211.1| Glutaryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] Length = 392 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + ++ + + D Y L+G K W +SP +D ++ A+ EGR+ + Sbjct: 136 FGLTEPNHGSNPSGMETKYKDMGDH-YLLNGAKLWISNSPFADIAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G NK R++AT EL F N + N+ G L Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNV---KVPKENILLGKTGLGAPLGC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ YA+ R G + + ++ +A++ +I A + Sbjct: 247 LDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAATQLQQKKLAEMITEITKAQLM 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + RL +E K+ + + + A K +MA + EA + +G G E SI R Sbjct: 307 ALRLGQLKNEGKATTAQISMA-------KRNNVEMALKIAREARQVLGAMGISGEYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|215402541|ref|ZP_03414722.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987] gi|289744476|ref|ZP_06503854.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987] gi|289685004|gb|EFD52492.1| acyl-CoA dehydrogenase fadE9 [Mycobacterium tuberculosis 02_1987] Length = 390 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 62/320 (19%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ T KDW P++ + V LTE G+D A++++ Sbjct: 93 AWMIDSFGTDEQRKDWIPRLAT-------------MGVIASYCLTEPGAGSDAGALSTRA 139 Query: 219 QKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR-----LLEDGSPNG 269 + G Y L G K F+S + SD ++++A+ G G PR ++E G+P G Sbjct: 140 VRHGSGKGGDYVLDGVKQFISGAAASDVYVVMART-GAAG----PRGVSAFIVEKGTP-G 193 Query: 270 LCYQRLKNKIGNRSNATVELEFSNT-----------------FGFLLGDLNVSTGPVEDM 312 L + + K+G + T ++ FG + LN Sbjct: 194 LSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGR------ 247 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ A S+ G + + +A Y R R GG L+D+P ++ +AD+A + + L Sbjct: 248 -----LNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRML 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A++ D+ + E + + K + V +A++ GG GY+ E + + Sbjct: 303 LWRAASALDDDDADKVE------LCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEK 356 Query: 433 HYRESPANSILLGSGNAMVL 452 R+ + IL G+ M L Sbjct: 357 IVRDLRVHRILEGTNEIMRL 376 >gi|182437578|ref|YP_001825297.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466094|dbj|BAG20614.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 608 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 60/374 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ I +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVRQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP+ D G NG+ +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356 + G + +I+ + + +++ + A+ YA+ R V G L +D+ K Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIAALSAGYLNALEYAKER-VQGPDLANFMDKTAPK 340 Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399 I D+ +L A A R + ++ E ++ E+A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEQEAAGEDAKALNGLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN--- 456 K + + + +A++++ GGSGY++E + ++ R++ +++ G+ D Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460 Query: 457 LLEKGTNLFEQLFSTLEQDL-----GSSGKKVITILRDSISLCKEDKG--LARFLTEKIA 509 + ++G +L +TL +++ G+ G + + DS++ D + +T+ A Sbjct: 461 VRDQGASL-----NTLSEEIKKFLAGAHGNEELAPALDSLAKAAVDLEAIVGTMITDLTA 515 Query: 510 LASSAAALYRAGMN 523 +Y+ G+N Sbjct: 516 TGEDVKNIYKVGLN 529 >gi|163738787|ref|ZP_02146201.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] gi|163741502|ref|ZP_02148893.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161385236|gb|EDQ09614.1| isovaleryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161388115|gb|EDQ12470.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGM 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + G + +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEFKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ + E + Y + R G + + +M+ IAD+ + A Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYMKERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426 A + +A + D+ ++AA CC A V +A++ GG+GY+ Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370 >gi|157962618|ref|YP_001502652.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847618|gb|ABV88117.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC 700345] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 140/308 (45%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P T IG L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + + Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F + + + N+ G +K+L+ LD + Sbjct: 195 RGYKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +SG + + A + Y R G + + +++ +AD+ + AA + + +A Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSYIYNVAK 311 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R++ Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364 Query: 439 ANSILLGS 446 I G+ Sbjct: 365 LYEIGAGT 372 >gi|331268674|ref|YP_004395166.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium botulinum BKT015925] gi|329125224|gb|AEB75169.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum BKT015925] Length = 381 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LTE GTD A+ + + D Y L+G K F+++ +D I+ A + G + Sbjct: 123 FALTEPNAGTDAASQQTIAKCRGD-YYILNGSKCFITNGAKADFGIVFAMTDRSKGVKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G + +NK+G R T EL F N G N++ ++ Sbjct: 182 SAFIVEKGFQGFTIGKHENKMGVRGTNTTELIFKDVKVPKENLLGKEGKGFNIAMATLDG 241 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +I + A ++ + +L E + Y ++R G L ++ ++++A I AA Sbjct: 242 GRIGV----ASQALGIAQGALDETVKYIKQRKQFGKPLSSFQGLQWTVSEMATRINAARW 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A+ ++ ++EAA A++ + + A V+ A++ GG GYI++ + Sbjct: 298 LIYDAADKKNKGLPYTKEAAMAKL-------YATRTAVYVVDRAVQLHGGYGYIKDYPVE 350 Query: 432 RHYRESPANSILLGS 446 R YR++ I G+ Sbjct: 351 RMYRDAKITEIYEGT 365 >gi|302543888|ref|ZP_07296230.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302461506|gb|EFL24599.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 608 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 88/372 (23%), Positives = 172/372 (46%), Gaps = 56/372 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S +SD I +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAVQQEDGTWHIEGVKRFITSGEHDVSDNIIHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGD 301 + F+VP+ D G NG+ +++K+G R + T EL F + G+LLG+ Sbjct: 224 KGLSLFVVPKYDFDWDSGELGERNGVYATNVEHKMGLRVSNTCELTFGADTPAKGWLLGE 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 + G + KI+ + + +++ + A+ YA+ R V G Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALEYAKER-VQGPDLAAFTDKSAPR 340 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE---AKSRSEEA-AYARI---MAPI 399 + P ++R++ AL A+ DE ++ E+A A +R+ + PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGLRALVLYTASVQDEIMVQEAAGEDASANSRLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD------ 453 K + + A +A++++ IGGSGY++E + ++ R++ +++ G+ D Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAIQGQDFFFRKI 460 Query: 454 VLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKED-KGL-ARFLTEKIALA 511 V + + T L E++ L + ++G + + RD ++ D +G+ LT+ A Sbjct: 461 VRDQGQALTVLSEEIKKFLAE---AAGGEELAPARDRLAQAAVDLEGIVGAMLTDLSATE 517 Query: 512 SSAAALYRAGMN 523 +++Y+ G+N Sbjct: 518 QDVSSIYKVGLN 529 >gi|254974604|ref|ZP_05271076.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-66c26] gi|255091996|ref|ZP_05321474.1| butyryl-CoA dehydrogenase [Clostridium difficile CIP 107932] gi|255313730|ref|ZP_05355313.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-76w55] gi|255516412|ref|ZP_05384088.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-97b34] gi|255649510|ref|ZP_05396412.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-37x79] gi|260682678|ref|YP_003213963.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196] gi|260686276|ref|YP_003217409.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291] gi|306519641|ref|ZP_07405988.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-32g58] gi|260208841|emb|CBA61771.1| butyryl-CoA dehydrogenase [Clostridium difficile CD196] gi|260212292|emb|CBE03052.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291] Length = 378 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ ++ D ++++A + G Sbjct: 122 FGLTEPNAGTD--ASGQQTTAVLDGDEYILNGSKIFITNAIAGDIYVVMAMTDKSKGNKG 179 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + ++E G+P G + + K+G R +AT EL F + + N+ + KI + Sbjct: 180 ISAFIVEKGTP-GFSFGVKEKKMGIRGSATSELIFEDC---RIPKENLLGKEGQGFKIAM 235 Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ + LA E + Y + R G L + +AD+ + + AA Sbjct: 236 STLDGGRIGIAAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAAR 295 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A + D K EAA A++ A T A V +A++ GG GY + + Sbjct: 296 HLVYQAAINKDLGKPYGVEAAMAKLFAAET-------AMEVTTKAVQLHGGYGYTRDYPV 348 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 349 ERMMRDAKITEIYEGT 364 >gi|120555716|ref|YP_960067.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325565|gb|ABM19880.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 38/276 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTAKKDGDD-YVINGSKMWITNSPKADFMCLLANTSDDKPHKNK 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-------ST 306 +VP + G+ + NK+G RS+ T ++ L D+ + + Sbjct: 182 TLMIVPM-----NTPGITFSPHLNKLGMRSSETAQV--------FLDDVRIPQRNRIGAE 228 Query: 307 GPVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G M++L + + A + + + + I Y R R G LID + +A++ Sbjct: 229 GTGFMMQMLQFQEERMWGAANVIKALENCVTQTIEYCRERKTFGQPLIDNQYIHFRLAEL 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 +I A AL+++ E K ++ A+ A++ A ++ V ++ GG+ Sbjct: 289 QTEIEALRALTYQACELHIEGKDVTKLASMAKLKAG-------RLGREVTDACLQFWGGN 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GY+ + ++R YR+ SI G+ M+ + L+ Sbjct: 342 GYMWDNPLSRAYRDVRLVSIGGGADEIMLGIICKLM 377 >gi|302518188|ref|ZP_07270530.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|302427083|gb|EFK98898.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D A+T++ + D + L+G K F+++ +D ++ A+ G Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 FLVP G+P G + L K+G R AT EL LLG +V+ Sbjct: 184 FLVP----TGTP-GFARRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ + A V + +L A+ +A+ R G + +++ +ADIALD+ A Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++R+A+ D + + A+ A++ A + A A++ GG GYI+E Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347 Query: 429 SIARHYRESPANSILLGS 446 + + R++ ++ G+ Sbjct: 348 PVGKLLRDARVMTLYEGT 365 >gi|254294859|ref|YP_003060882.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] gi|254043390|gb|ACT60185.1| acyl-CoA dehydrogenase domain protein [Hirschia baltica ATCC 49814] Length = 392 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 18/238 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ +K+ DG Y L+G K W +SP++D F++ +++G + F Sbjct: 137 FGLTEPNHGSDPNSMETRAKKV-DGGYELNGTKMWITNSPIADVFVVWGKLDGVIRGF-- 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G +GL +K K+ R++ T E+ + F LL + +GP + Sbjct: 194 --VLEKGM-DGLSAPEIKGKLALRASITGEIVMDSVFVPEDNLLPNAKGLSGPFGCLNKA 250 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y A ++ + A Y R G L ++++ +AD+ +I+ A + Sbjct: 251 RY-GIAWGALGAATACWSTAREYTIDRQQFGRPLAANQLIQKKLADMQTEISIGQAACLQ 309 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + DE K + + K A A+ E + +GG+G +E + RH Sbjct: 310 IGRLLDEKKCPPTAIS-------LIKRNSAGKALAIARECRDMLGGNGISDEFHVMRH 360 >gi|126513532|gb|ABO15870.1| acyl-CoA dehydrogenase [Streptomyces vitaminophilus] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 34/290 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + W P S + + + +TE G+D+A IT+ ++ D +Y Sbjct: 104 TPEQKQRWLPGFASGD-------------LMTAIAMTEPGTGSDLAGITTTARRDGD-VY 149 Query: 227 CLSGHKWFLSS-PMSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 L+G K F++ ++D +++ + + R G ++ ++E SP G R KI Sbjct: 150 VLNGSKTFITGGALADLVLVVCRTAPRQDGDRRAGLSIL--VVEATSP-GFSVGRKLEKI 206 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 G R+ T EL F LLG+ + G + + L I +V+ ++ + Sbjct: 207 GLRTQDTAELFFDEVRVPAANLLGEEGEAFGYLSHNLVQERLAIVIGAVTAAAAAVEMTV 266 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R+R V G L K +A+ A ++ A L D A E + Sbjct: 267 EYVRQREVFGKPLSSFQNTKFVLAECAAEVEAGQVL-------MDRAIEEHERGELSHAD 319 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K +C +M VI + ++ GG GY+ E IAR Y ++ + + G+ Sbjct: 320 VAKAKLFCTEMEGRVIDKCLQLHGGYGYMLEYPIARLYADARVHRVYGGT 369 >gi|313228507|emb|CBY23659.1| unnamed protein product [Oikopleura dioica] Length = 421 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 20/288 (6%) Query: 175 APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 AP I F E P T I +G+TE GG+D+ A+ + + D + L+G Sbjct: 130 APYITSFGTEEQKHKYIPSMTTGETISCIGMTEPSGGSDLQAMKTNAVRDGDD-WILNGS 188 Query: 232 KWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K F+S+ ++A + EGR + L++ NG + KIG S T E Sbjct: 189 KTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTREHNGFNKGKNLRKIGQHSYDTAE 248 Query: 289 LEFSNT---FGFLLGD---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 L F + LLG+ LN + + + A+ +++ + + + Y + R Sbjct: 249 LFFDDVRLPASALLGEEEGLNKGFYMMMNELPRERVGCALEALARLENAFEQTRQYTQER 308 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 GG L D+ V+K ++A+I +I + ++ + + +E A+ ++ A KY Sbjct: 309 KAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLYSRGELDNETASMFKLYA-TEKY 367 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 C + + ++ GG GY+ E IA+ Y + +I G+ M Sbjct: 368 VSC------VNKLLQHWGGWGYMWEYDIAKEYAGARVFTIYAGTSEIM 409 >gi|312141503|ref|YP_004008839.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325677282|ref|ZP_08156948.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311890842|emb|CBH50161.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325551979|gb|EGD21675.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 29/294 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K W P + S E V G LTE G+DIA++ + ++ DG + Sbjct: 105 TEEQKKRWLPGLASGE-------------VLAGFALTEPDAGSDIASMRTVARREDDG-W 150 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 LSG K F+S+ +D ++ A+ + G F VP+ G+P G+ Y ++K+G Sbjct: 151 HLSGSKTFISNAREADLVVLFAKTDPSAGFRGITAFAVPK----GTP-GISYSEPQDKMG 205 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 RS T + + L D + T L L+ A + V+ M +A Sbjct: 206 IRSAPTYTVYLDDVV--LPHDAVIGTEGRGGNIALTALNRARIDVAAMANGIALRAWELG 263 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R + S P+ + + L A ++ R+ + D A + R A I+ Sbjct: 264 REYASERKQFGHPIFEFQAIQLLLGECDAKLVASRV--TADWASDVKDAGQDLRRAASIS 321 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 KY + +++ + ++ GG+G++ E I R YR+ I G+ +L + Sbjct: 322 KYVATEACFSIVDQVVQIHGGAGFMRESEIERLYRDCRILRIFEGTSQIQLLTI 375 >gi|126667234|ref|ZP_01738208.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] gi|126628390|gb|EAZ99013.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] Length = 388 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 31/275 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVG 254 LTE G+D A++ ++ ++ D Y ++G K F+S + +D I++A+ + Sbjct: 124 LTEPGAGSDAASLRTKAERDGDD-YVINGSKVFISGAGATDVLILMARTGSPDSGAKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMK 313 FL+P +G+ Y + + K+G S T + N + L G MK Sbjct: 183 AFLIP-----ADADGVSYGKNEKKMGWHSQPTRSVTLENVRVPVTNRLGAEGEGFAIAMK 237 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ G + +L A Y R G L ++ +AD+A ++ AA Sbjct: 238 GLDGGRLNIATCSLGGAQAALLRARDYMHARAQFGKPLAAFQALQFKLADMATNLVAARQ 297 Query: 372 L----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + +F+L N EA + + K + + V+ +A++ GG GYI E Sbjct: 298 MVRLGAFKLDNGDPEAT----------LHCAMAKRFATDVCFDVVNDALQLHGGYGYIRE 347 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461 + R+ R+ + IL G+ M L V +LE+G Sbjct: 348 YPLERYLRDLRVHQILEGTNEVMRLIVARRILEQG 382 >gi|328885620|emb|CCA58859.1| Branched-chain acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ ++ D Y L+G K F+S + SD +I+LA+ G + Sbjct: 126 LTEPGAGSDAAALRTRAERDGDH-YVLTGVKQFISGAGTSDVYIVLARTGGGGPGGISAF 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317 ++E G P G+ + + K+G + T ++ + D + E +I ++ Sbjct: 185 VVERGDP-GVSFGANERKMGWNAQPTRQVVLDGVR--IPADRRLGA-EGEGFRIAMHGLN 240 Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A S+ G + +L ++ + R G L+D ++ +AD+A ++ AA AL Sbjct: 241 GGRLGIAACSLGGAQSALDRSLTHLADREAFGAPLLDAQALQFRLADMATELTAARALVR 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A++ D R + AA + + K + +V A++ GG GY+ E I + Sbjct: 301 QAADALD----RGDPAAVQ--LCAMAKRFATDTGFSVADRALQLHGGYGYLSEYGIEKIV 354 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 355 RDLRVHRILEGTNEIM 370 >gi|85712837|ref|ZP_01043879.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145] gi|85693301|gb|EAQ31257.1| Acyl-CoA dehydrogenase family protein [Idiomarina baltica OS145] Length = 593 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + D Y +SG K F++ D ++LA++ Sbjct: 166 LTEPHAGTDLGIIKTKAEPQGDDSYLISGTKIFITGGEHDLVDNIVHLVLAKLPDAPAGT 225 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ L +DGS N + +++K+G +AT + F G+++G+ N Sbjct: 226 KGISLFVVPKFLVNDDGSVGERNAVSCGSIEHKMGIHGSATCVMNFDGARGWMVGEPNRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------------LIDQP 353 + M L I + S A+ YAR R G L+ Sbjct: 286 LAAMFTMMNYERLGVGIQGLGTAERSYQNALEYARERIQGRGAKATRDMSAAADPLLVHG 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEA-----AYARIMAPITKYWCCKM 407 ++R + + A S + D AK S+E A ++ P+ K + Sbjct: 346 DIRRMLLTMKSLTEGGRAFSTWVGQQLDRAKYGESDEVKQQADAMVALLTPVAKAFLTDT 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GY+ E + R++ I G+ LD+L Sbjct: 406 GLESTIHGQQIFGGHGYVREWGQEQLIRDTRIAQIYEGTNGIQALDLLG 454 >gi|47569767|ref|ZP_00240439.1| acyl-CoA dehydrogenase [Bacillus cereus G9241] gi|47553563|gb|EAL11942.1| acyl-CoA dehydrogenase [Bacillus cereus G9241] Length = 376 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPDAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L +R A+ + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EASRLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|262371685|ref|ZP_06064964.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205] gi|262311710|gb|EEY92795.1| acyl-CoA dehydrogenase [Acinetobacter junii SH205] Length = 600 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + +DG Y +SG K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPQADGSYAISGEKIFISAGEHDMAENIVHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFHVNADGSVGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRLAMRALSGPKALEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL + L+ D E + E+ ++ ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVYLLSLHADIVEQGATEEDRKFSDNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|149377503|ref|ZP_01895244.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149358195|gb|EDM46676.1| Acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 596 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 36/292 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE GTD+ I ++ + DG + ++G K F++ D ++LA++ + Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNGDGSFSVTGTKIFITWGEHDMAENIIHLVLAKLPDAPK 223 Query: 251 GRVGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ + EDGS N L L+ K+G + +AT + F G+L+G+ N Sbjct: 224 GPKGISLFLVPKFDVNEDGSLGERNSLSCGSLEKKMGIKGSATCVMNFDGAKGWLVGEEN 283 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350 + M L I + SL A YA R + IL+ Sbjct: 284 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYALERIQSRAPTGAQQPEKAADPILV 343 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404 P ++R + + + A S +A D AK R ++ P+ K + Sbjct: 344 -HPDVRRMLLTMKGYVEGGRAFSTYVAQWLDIAKYSDDDERRKHAEGMVALLTPVAKAFL 402 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG G+I E + R+ I G+ LD++ Sbjct: 403 TDRGLDACIMGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQALDLMG 454 >gi|41393139|ref|NP_958899.1| isovaleryl-CoA dehydrogenase, mitochondrial [Danio rerio] gi|28279589|gb|AAH45426.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio] gi|182891438|gb|AAI64520.1| Ivd protein [Danio rerio] Length = 418 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257 L ++E G+D+ ++ +K D Y L+G+K W + +D I+ A+ + V + Sbjct: 159 LAMSESNSGSDVVSMKLTAKKQGDH-YVLNGNKFWITNGSDADVLIVYAKTDPEAVARGI 217 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E G P Q+L +K+G R ++T EL F + +LG LN + Sbjct: 218 TAFIVEKGMPGFSSAQKL-DKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLD 276 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L L A V M+ L AI Y R G + +M+ +AD+ +++ + Sbjct: 277 LERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 336 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + D+ +++ A + +C + A V + ++C+GG+GYI + + R Sbjct: 337 NVARACDKGHFSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPMGRFL 389 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 390 RDAKLYEIGAGT 401 >gi|209886037|ref|YP_002289894.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5] gi|209874233|gb|ACI94029.1| glutaryl-CoA dehydrogenase, (GCD) [Oligotropha carboxidovorans OM5] Length = 401 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255 GLTE G+D+ + ++ +K+SDG Y L+G K W ++P++D F++ A+ + +V Sbjct: 143 FGLTEPDAGSDVDGMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVVWAKSQAHDNKVRG 201 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL +++ GP Sbjct: 202 FILEKGMK-----GLSAPKIAGKLSLRASITGEVVMDGVVVPESALLPNVSGLAGP---- 252 Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE H AR+ R G L ++++ +AD+ +IA Sbjct: 253 --FGCLNRARYGISWGAMGAAEDCFHRARQYVLDRKQFGRPLAATQLVQKKLADMEAEIA 310 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K E M I K C A + A + GG+G E Sbjct: 311 LGLQGSLRIGRLMDEGKVTPE-------MVSIMKRNNCGKALDIARVARDMHGGNGISSE 363 Query: 428 RSIARH 433 + RH Sbjct: 364 FHVMRH 369 >gi|94497395|ref|ZP_01303966.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58] gi|94423258|gb|EAT08288.1| Butyryl-CoA dehydrogenase [Sphingomonas sp. SKA58] Length = 381 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D AA+ +Q + D Y ++G K F+S + ++ G G C Sbjct: 125 LTEAGSGSDAAALKTQAVRDGDH-YVVTGSKQFISGGGENELYVVMVRTGEDGPKGISCL 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 ++ + +E G+ + + K+G S T ++ F G + N+ E +I + Sbjct: 184 VIEKDME-----GVSFGAPERKLGWHSQPTAQVNFD---GVRVPVDNLVGAEGEGFRIAM 235 Query: 316 IYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + LD + S+ G + + EA+ Y + R G + D + +AD+ ++ AA Sbjct: 236 MGLDGGRLNIGACSLGGAQRCIDEAVRYTKDRKQFGQAIADFQNTQFMLADMLTELEAAR 295 Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A E A ++ AA A+ +A T +V+ A++ GG GY+ + Sbjct: 296 TLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVDRALQLHGGYGYLMDYP 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVL-NLLEKG 461 + R +R+ +SIL G+ M + V ++L +G Sbjct: 349 VERFWRDLRVHSILEGTNQVMRMIVARDMLRQG 381 >gi|90419436|ref|ZP_01227346.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90336373|gb|EAS50114.1| acyl-CoA dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 407 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 32/257 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D +T++ +KI DG Y LSG K W +SP++D F++ A Sbjct: 138 PRLATGEYVGCFGLTEPDAGSDPGGMTTRAEKI-DGGYRLSGAKMWISNSPIADVFVVWA 196 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + + ++ F++ D GL +++ K+ R++ T E+ LL + Sbjct: 197 KSAAHDNKIRGFIL-----DKGMKGLSAPKIEGKLSLRASITGEIVMDGVEVGEDALLPN 251 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMK 356 ++ GP L+ A +S + AE A Y R G L +++ Sbjct: 252 VSGLGGP------FGCLNRARYGISWGAMGAAEDCWKRARDYTMERTQFGRPLAQTQLVQ 305 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +AD+ +IA S R+ FD E A A M + K C A + A Sbjct: 306 KKLADMQTEIALGLQGSLRVGRLFD-------EGAMAPEMISLIKRNNCGKALDIARTAR 358 Query: 417 ECIGGSGYIEERSIARH 433 + GG+G + E + RH Sbjct: 359 DMHGGNGIMGEYHVMRH 375 >gi|333028133|ref|ZP_08456197.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332747985|gb|EGJ78426.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D A+T++ + D + L+G K F+++ +D ++ A+ G Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 FLVP G+P G + L K+G R AT EL LLG +V+ Sbjct: 184 FLVP----TGTP-GFARRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ + A V + +L A+ +A+ R G + +++ +ADIALD+ A Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++R+A+ D + + A+ A++ A + A A++ GG GYI+E Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347 Query: 429 SIARHYRESPANSILLGS 446 + + R++ ++ G+ Sbjct: 348 PVGKLLRDARVMTLYEGT 365 >gi|291523988|emb|CBK89575.1| Acyl-CoA dehydrogenases [Eubacterium rectale DSM 17629] gi|291528550|emb|CBK94136.1| Acyl-CoA dehydrogenases [Eubacterium rectale M104/1] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 27/285 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236 F E P + IG GLTE GTD A Q + + DG + L+G K F++ Sbjct: 101 FGTEEQKKKYVPDLASGKKIGAFGLTEPGAGTD--AQGCQTKAVLDGDEWVLNGSKCFIT 158 Query: 237 S-PMSDAFIMLA------QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + ++D +I++A GR +++ G+P G + + K+G R ++T EL Sbjct: 159 NGKVADVYIIIAITSITEDKRGRKKKNFSAFIVDKGTP-GFSFGTKEKKMGIRGSSTYEL 217 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARR 341 F + LLG P+ + LD + ++ + +AE I Y + Sbjct: 218 IFEDARIPKDALLGKEGRGF-PI----AMHTLDGGRIGIAAQALGIAEGALERTIEYTKE 272 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + Q + +AD+A I AA L + A E +++ + +Y+ + A K Sbjct: 273 RKQFGRSIAQQQNTQFKLADMATRIDAAKYLVYAAAMKKAEF-AKNPKVSYS-VDAAKAK 330 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A AV E ++ GG GYI E + R R++ I G+ Sbjct: 331 LFAAETAMAVTTECVQLFGGYGYIREYDVERMMRDAKITEIYEGT 375 >gi|226303698|ref|YP_002763656.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226182813|dbj|BAH30917.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 15/268 (5%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247 P T +G +G+TE G+D+ AIT+ + D Y ++G K F+++ S I LA Sbjct: 116 PGMATGEILGAIGMTEPGTGSDLKAITTSATRDGDH-YVVNGSKTFITNGGSADMIALAV 174 Query: 248 QVEGRVGCFLVPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL- 302 + + + G V L+ D G R+ +K+G T EL F++ LLG+ Sbjct: 175 KTDPKAGAKGVSLLIVDLRDCEGFAVGRVLDKVGQHGADTSELSFTDVRVPVSNLLGESE 234 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + G + + L ++ + ++ E + Y + R G L + + Sbjct: 235 GLGFGQLMAQLVQERLIIGAQAIGTIERAVEETVAYTKARQAFGHNLFE-------FQNT 287 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++A ++ D A + KYW + AV+ ++ GG Sbjct: 288 AFELAECQTIARTCRVFLDNCIEDHLNGELDGADAAMVKYWLTEQQCAVVDRCVQLYGGY 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y +S I G+ M Sbjct: 348 GYMREYPIARMYEDSRVQKIYAGANEVM 375 >gi|89095580|ref|ZP_01168474.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89089326|gb|EAR68433.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 379 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 18/291 (6%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K S E PM + GLTE G+D + + + D Y L+G K F++ Sbjct: 100 KFGSEEQKQKYLKPMAQGEKIGAYGLTEPGSGSDAGGMRTTARLDGDH-YVLNGSKIFIT 158 Query: 237 SP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 + ++D +++ A + + + G + + K+G RS+ T E+ F + Sbjct: 159 NGGIADIYVVFALTDPESRQKGTTAFIIESDFPGFSVGKKEKKLGIRSSPTTEIIFEDC- 217 Query: 296 GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349 + N+ E KI ++ LD ++ V +A+ A+ YA+ R G + Sbjct: 218 --RVPKKNMLGKEGEGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVDYAKEREQFGKPI 275 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 Q + +AD+A + AA L+++ A E +E+A ++K + A Sbjct: 276 ALQQGIGFKLADMATSVEAARLLTYQAAWLESEGLPYGKESA-------MSKLFAGDAAM 328 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V EA++ GG GY ++ + R+ R++ I G+ L + ++ K Sbjct: 329 KVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMITK 379 >gi|330824118|ref|YP_004387421.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329309490|gb|AEB83905.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 45/285 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225 TP + PK+ + E + LTE G+D A++ + I DG Sbjct: 102 TPEQQAKYLPKLATGE-------------MMASFALTEPEAGSDAASLRTTA--IRDGDF 146 Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G K F++ +P + F ++A+ G V F+V E G+P G+ + + K Sbjct: 147 YVVNGTKRFITNAPQAGMFTLMARTNPANKGAGGVSAFIV----EAGTP-GISFGKRDKK 201 Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVS 331 +G + T ++ F N L+G L G MK+L I++ + ++V+ + Sbjct: 202 MGQKGAHTCDVIFENVRVPAANLIG-LKEGQGFKTAMKVLEKGRIHIAAVAVAVAERMLD 260 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 +A + YA R G + + +++ +AD +I AA + A D+ S EA+ Sbjct: 261 MA--LRYAAERRQFGQPIGNFQLVQAMLADSKAEIYAARCMVLDAARRRDDKLPNSTEAS 318 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A K + +M V A++ GG+GY+ E +I R YR+ Sbjct: 319 CA-------KMFATEMCGRVADRAVQIFGGAGYMSEYAIERFYRD 356 >gi|325914008|ref|ZP_08176364.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325539777|gb|EGD11417.1| acyl-CoA dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 391 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 14/236 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GL+E +GG+D AA+T++ + DG G W + +++ I+ A + V FLV Sbjct: 137 FGLSEAQGGSDPAAMTTRAVRDGDGWRLNGGKMWITNGSIANLAIIWAHTDDGVCGFLV- 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 E SP G Q + +K+ R++ T L N F L + G + L Sbjct: 196 ---ETDSP-GFSAQDITHKMSLRASVTSALFLDNVFVPEQMRLPSAAGMKAPLGCLNQAR 251 Query: 320 SAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 I ++ L EA+ YA R + G L + +AD+A I+ A L+ +L Sbjct: 252 YGIAWGAIGAAVACLREALAYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQLG 311 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + R E+ + A K+ C+MA V + + +G +G E RH Sbjct: 312 RLKEAGTLRPEQISLA-------KWNNCRMALDVARQCRDLLGAAGITTEHVAIRH 360 >gi|225874379|ref|YP_002755838.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] gi|225792680|gb|ACO32770.1| acetyl-CoA dehydrogenase [Acidobacterium capsulatum ATCC 51196] Length = 612 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 31/285 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV---------E 250 L+E G+D I ++ DG Y L+G K W ++ +++ F + A++ Sbjct: 153 LSEASSGSDAMNIRTRATLSPDGQHYVLNGEKMWITNAGVANLFTLFARIVDPADPDPAH 212 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTG 307 + FL+ R +P GL ++K+G R ++T L S+ LLG+ Sbjct: 213 TQFSAFLIER----DTP-GLTVGPEEHKLGIRGSSTCPLILSDCRVPVANLLGEAGKGHH 267 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ + + G + SLA++I YAR R G + + ++++ IAD A I Sbjct: 268 IAFNILNIGRFKLGAACLGGAKHSLADSIAYARDRKAFGKSITEFGLIQQKIADAAARIF 327 Query: 368 AATALSFRLANSFDEAKSR--SEEAAYAR----------IMAPITKYWCCKMAPAVIAEA 415 ++++R + D A + E+AA +R I I K W +M V Sbjct: 328 MGESMTYRAIGAIDAALAAIPPEQAAGSREIQKRIEAYAIECSILKVWASEMLGIVTDHG 387 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ G GY+E+ R +R++ N I G+ L + L K Sbjct: 388 VQIHAGYGYVEDYPAERAWRDARINRIFEGTNEINRLIISGFLMK 432 >gi|206975925|ref|ZP_03236836.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] gi|206746019|gb|EDZ57415.1| acyl-CoA dehydrogenase [Bacillus cereus H3081.97] Length = 376 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 124 LTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGISA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 183 FIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + LD + + + +AEA I YA+ R G + Q + +AD+A + Sbjct: 232 KVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A + +EA+ I K + K A V EA++ GG GY + Sbjct: 292 EAARLLVYRAAWLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGYTK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 345 DYPVERFFRDAKITQIYEGT 364 >gi|254232824|ref|ZP_04926151.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C] gi|124601883|gb|EAY60893.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis C] Length = 420 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 164 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 222 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 223 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 280 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 281 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 331 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 332 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 384 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 385 MREYPVARAYLDSRVQTIYGGTTEIM 410 >gi|118590352|ref|ZP_01547754.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614] gi|118436815|gb|EAV43454.1| glutaryl-CoA dehydrogenase [Stappia aggregata IAM 12614] Length = 407 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 16/249 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D A + ++ +KI DG Y L+G K W +SP++D F++ A Sbjct: 138 PKLATGEFVGCFGLTEPDAGSDPAGMRTRAEKI-DGGYKLTGSKMWISNSPIADVFVVWA 196 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 + E G + +LE G GL ++ K+ R++ T E+ LL +++ Sbjct: 197 KSEAHDGA-IRGFVLEKGM-KGLTAPKVGGKLSLRASITGEIVMDGVEVGEDALLPNVSG 254 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 GP + Y A ++ A Y R G L + ++ +AD+ Sbjct: 255 LKGPFGCLNRARY-GIAWGAMGAAEDCWTRARQYGLDREQFGRPLAQTQLFQKKLADMQT 313 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I + R+ FD K E M + K C A + ++ + GG+G Sbjct: 314 EITLGLQAALRVGQLFDAGKVAPE-------MISLIKRNNCGKALDIARQSRDMHGGNGI 366 Query: 425 IEERSIARH 433 EE I RH Sbjct: 367 QEEYHIMRH 375 >gi|268568050|ref|XP_002640145.1| C. briggsae CBR-ACDH-1 protein [Caenorhabditis briggsae] gi|187029249|emb|CAP31592.1| CBR-ACDH-1 protein [Caenorhabditis briggsae AF16] Length = 421 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 36/274 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VG 254 ++E G+D A+ + +K DG Y +SG K W +S + F++ A + + Sbjct: 161 ISESGAGSDAFALKTTAKK--DGYHYLISGSKMWITNSSEAQVFVVFANADPSQKYKGIT 218 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 CF+V R S G+ + ++K+G R+++T ++ F N +LG+ + Sbjct: 219 CFIVER-----SQEGVSVCKEEDKLGIRASSTCQVNFDNVRVHESAILGEYG------KG 267 Query: 312 MKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 K I L++ +++ + LA+ I Y ++R G LID ++ IA + Sbjct: 268 YKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQIAQARTE 327 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L + + A+ + Y R A + K + ++A + A+ ++ +GG G+ Sbjct: 328 IEAARLLVY------NAARMKEYGIPYVR-QAAMAKLFASQVATSTSAQCVKWLGGVGFT 380 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 ++ + YR++ I G+ N + + L++ Sbjct: 381 KDFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLID 414 >gi|301063823|ref|ZP_07204313.1| acyl-CoA dehydrogenase family protein [delta proteobacterium NaphS2] gi|300442072|gb|EFK06347.1| acyl-CoA dehydrogenase family protein [delta proteobacterium NaphS2] Length = 539 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 44/274 (16%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISD--GI---YCLSGHKWFLSSP-MSDAFIMLAQ 248 + + G+TE G+++ ++ ++ +++ D G+ Y ++G K F+++ ++ + +LA Sbjct: 123 GLVVAYGVTEPEAGSNVQSLKTKAERVLDENGLIKGYRINGQKQFITNGGVAQLYTILAD 182 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 F+VP G GL + ++K G R++ T L L DL V P Sbjct: 183 APDGPSFFIVP-----GGAEGLIPGKHEDKHGIRASDTCPLS--------LEDLYV---P 226 Query: 309 VEDM-------------KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-Q 352 VED+ K+ Y L A + G +L + I YA+ R G LID Q Sbjct: 227 VEDLVGGVEGQGLKQANKVFGYTRLMVATFGLGGGVAALEKTIKYAKERVQFGTALIDKQ 286 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 R + A+ + AA A +A D EE ++ I KY+ + A+ Sbjct: 287 GYTHRLLVPNAVKLEAARAYIEEVARRLD----TDEEDL--QVEGSIAKYFATEAGDAMA 340 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GYI E + + R+ +I G+ Sbjct: 341 NDAIQAFGGYGYIREYEVEKIKRDVKILTIYEGT 374 >gi|292654389|ref|YP_003534286.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] gi|291371260|gb|ADE03487.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 43/307 (14%) Query: 142 LMAQLEAGH--LMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 LM +LEAG L S + S+V + + W PK+ S E Sbjct: 77 LMQELEAGDSGLRSMASVQGSLVIYPIHAYGSDEQKQRWLPKLGSGE------------- 123 Query: 196 VAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VE 250 A+G GLTE + G+D + + ++ ++ +DG Y L+G K W +SP++D ++ A+ E Sbjct: 124 -AVGCFGLTEPQHGSDPSGMETRAERDADG-YVLNGSKTWITNSPIADVAVVWARDVSAE 181 Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 G V FLV + +G+ +++ K+ R++ T E+ + +L + Sbjct: 182 GSPVRGFLV-----ETDRDGVTTNKIEGKLSMRASVTGEIGLDDVRVPEEDVLPGVEGMN 236 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 GP+ + + A V R + +A YA+ R GG + + + +A++A I Sbjct: 237 GPLSCLTQARF-GIAWGVVGAARDAFEDARQYAKDRDQFGGPIARFQLQQGKLAEMATQI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A ++ RL + + R ++ + A K ++A V A E +GG+G Sbjct: 296 TNAQLMAHRLTDLKERGDLRHQQVSMA-------KRHNVRVAREVTRTAREMLGGNGITT 348 Query: 427 ERSIARH 433 + S RH Sbjct: 349 DYSPMRH 355 >gi|301111296|ref|XP_002904727.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] gi|262095057|gb|EEY53109.1| acyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] Length = 411 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 126/275 (45%), Gaps = 34/275 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----- 254 L+E G+D A+ ++ + DG Y ++G K W ++ S +++ A V+ G Sbjct: 151 LSEAGSGSDAFALKTRAEASPDGSYYSITGQKMWISNAEYSGVYLVFANVDPSKGYKGIT 210 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 CF+V R +E GL + + K+G R+++T + ++ +LG+L + Sbjct: 211 CFIVDRDME-----GLEIGKPEEKLGIRASSTCPVTLTDVKVPKENILGELG------KG 259 Query: 312 MKILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALD 365 KI I L+ + ++ + LA+ ++ Y R G + + M+ A+ ALD Sbjct: 260 YKIAISTLNEGRIGIASQMLGLAQGVYDQTLPYLFERQQFGSPIGEFQAMQHQYAEAALD 319 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A L + A D + ++AA A++ A ++A ++ +E +GG G+ Sbjct: 320 IETARLLVYNAARLKDAGQPFVKQAAMAKLHA-------SRVAEKTASKCIELLGGIGFT 372 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + + YR++ +I G+ N + + L+ + Sbjct: 373 KYLLAEKFYRDAKIGAIYEGTSNMQLTTIAKLVSE 407 >gi|254392952|ref|ZP_05008118.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294817832|ref|ZP_06776474.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|326446700|ref|ZP_08221434.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197706605|gb|EDY52417.1| acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294322647|gb|EFG04782.1| Acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 29/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 +TE G+D A+ + + +DG + L G K F+S+ P++D F++ A+ G F + Sbjct: 125 ITESGSGSDALAMRTTATRDADGGFVLRGSKSFVSNGPVADVFVVYARTHPDGGPFGISA 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 + + + GL K+G R++ EL F + GFL+ D Sbjct: 185 FVVERNTPGLTVGAPVGKMGLRTSPLSELHFDDCRIPASAVLGRVGSGFLILD------H 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 V +IL+ I+S MR L + YA+ R G + + I D+ + + Sbjct: 239 VMKWEILLAF---IISTGQMRYRLDRCVEYAKERTQFGQAIGSYQAISHRIVDMKIGLET 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + A ++ + + + ++++A + A A A++ GGSGY+ E Sbjct: 296 SRKWLYDTAVRMTAGENVTTDISISKVIA-------SESALASAQAAVQIFGGSGYLTEC 348 Query: 429 SIARHYRESPANSILLGS 446 + + R++ A I G+ Sbjct: 349 GLEKDLRDAVAGPIYSGT 366 >gi|163737634|ref|ZP_02145051.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107] gi|161389160|gb|EDQ13512.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 32/288 (11%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 A +F E P+ ++ AI LTE + G+D+A T + DG Y L+G K Sbjct: 99 AISLFGTEAQQAEWLPLTRSGKAISAFALTEPQSGSDVANSTMTAMR--DGEHYVLNGEK 156 Query: 233 -WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 W + ++D + + A+ EG + F+VP G P +RL+ + AT Sbjct: 157 TWISNGGIADIYTLFARSGEGPGAKGLSAFVVPA----GLPGFEVVERLET-LAPHPLAT 211 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARR 341 L FS+ LLG G M +L S + + + G R +L EA+ Sbjct: 212 --LRFSDCRIPRSALLG--APGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTS 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPIT 400 RHV G L D +++ IAD+ALD+ A+ L +R A + D +R + EAA A Sbjct: 268 RHVQGARLADLQMVQGHIADMALDVDASALLVYRAAWAKDSGAARITREAAMA------- 320 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + A +I +A++ GG G + + + YR+ A I G+ + Sbjct: 321 KLFSTDQAQKIIDKAVQLHGGDGVRQGQKVEELYRDIRALRIYEGASD 368 >gi|157691425|ref|YP_001485887.1| acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032] gi|157680183|gb|ABV61327.1| possible acyl-CoA dehydrogenase (NADP(+)) [Bacillus pumilus SAFR-032] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 29/258 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D + + QK Y L+G K W ++D FI++A+ +V FLV Sbjct: 120 FALSEPNIGSDANHVETSYQKEGQS-YVLNGKKKWISFGAIADFFIVIARDGEQVTAFLV 178 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST--GPVE---DMK 313 R + G+ +R+ + NR++ E+ + +N S+ GPV + Sbjct: 179 DR-----NQPGVEIERITGMMANRASYLAEITLDHVH------VNESSVLGPVGGGFNHV 227 Query: 314 ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + LD SV+ +++A+ + Y+R+R L ++K I D + A Sbjct: 228 VSLALDHGRYSVAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHA 287 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A AL + A EA A I KY+ K+A + ++ GGSG+ E Sbjct: 288 ARALCLK-AGEMREANHPD-----AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSREN 341 Query: 429 SIARHYRESPANSILLGS 446 S +R YRE+ I+ G+ Sbjct: 342 SASRLYREAKVLEIIEGT 359 >gi|86130775|ref|ZP_01049374.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] gi|85818186|gb|EAQ39346.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] Length = 392 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 39/249 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + + + + D Y L+G K W +SP D ++ A+ EGR+ + Sbjct: 136 FGLTEPDHGSNPSGMVTNFKDMGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 V R +E G NK R++AT EL F D+ V P E++ Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQ--------DVKV---PKENLLPNKS 238 Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 L LDSA ++ + A A+ YA+ R G + + ++ +A++ Sbjct: 239 GLGAPLGCLDSARFGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMIT 298 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A L+FRL +E ++ S + + A K +MA + EA + +GG G Sbjct: 299 EITKAQLLAFRLGQLKNEDRATSAQISMA-------KRNNVEMAIKIAREARQMLGGMGI 351 Query: 425 IEERSIARH 433 E SI RH Sbjct: 352 TGEYSIMRH 360 >gi|109899232|ref|YP_662487.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c] gi|109701513|gb|ABG41433.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 126/255 (49%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + K D Y L+G+K W + P +D +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDH-YVLNGNKMWITNGPDADTYVIYAKTDISAGSKGM 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 ++E G+P Q+L +K+G RS+ T EL F + + N+ + ++L+ Sbjct: 189 SAFIVERGTPGFSQAQKL-DKLGMRSSNTCELVFEDC---PVPAENLIRNEGDGARVLMS 244 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + +SG + + +A + Y R G + + +++ +AD+ + AA A Sbjct: 245 GLDYERLVLSGGPLGIMQACMDLVVPYIHDRKQFGQSIGEFQLVQGKVADMYTQMNAARA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ ++AA A I+ + ++A + +A++ +GG+GYI E Sbjct: 305 YVYTVARACDRGETTRKDAA-AVIL------YSAELATKMALDAIQLLGGNGYINEFPAG 357 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 358 RLLRDAKLYEIGAGT 372 >gi|332284306|ref|YP_004416217.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] gi|330428259|gb|AEC19593.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] Length = 384 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 164/412 (39%), Gaps = 40/412 (9%) Query: 63 EYVLSCTAQELARMA-NYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWD 121 E+ LS Q A+ A +Y +L P RWD P R+ G C+I+ Sbjct: 2 EFRLSDEQQAFAQAARDYAVGELE---PHAARWDAESIFP--REAFARAGELGF-CAIY- 54 Query: 122 RSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSR 181 + + RL E PS T+ + M T + WA + Sbjct: 55 ------APESIGGLGLPRLDATLVFEEMAAYDPSTTAFLTIHNMATWMIGS-WASESVRN 107 Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 + P A + S LTE G+D A+++++ K Y L+G K F+S Sbjct: 108 AWGPQLAAGEKLASYC----LTEPGAGSDAASLSTRADK-KGASYVLNGAKAFISGAGDT 162 Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 +++ G G + G+ Y R ++K+G S +T + F N + Sbjct: 163 DLLVVMARTGEAGARGISAFAVPADTPGITYGRKEDKMGWNSQSTRPITFDNV---EVPA 219 Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVM 355 N+ E K + LD ++++ V A+ + A RR++ G L D + Sbjct: 220 ENLLGQEGEGFKFAMKGLDGGRINIATCSVGAAQGAYDAARRYMGERKQFGHALADFQAL 279 Query: 356 KRAIADIALDIAAATALSFRLANSF--DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + + D+ I A+ + RLA S D+ S A A+ +A + C Sbjct: 280 QFKLVDMLTHIVASRQM-VRLAASKLDDQDPQASSYCAMAKRLATDLCFQAC-------L 331 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 +A + GG GY+++ + R R++ + IL G+ M V+ LLEKG ++ Sbjct: 332 DAQQIHGGYGYLKDYPLERLVRDTRVHQILEGTNEIMRVIVARQLLEKGADI 383 >gi|169826446|ref|YP_001696604.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] gi|168990934|gb|ACA38474.1| acyl-CoA dehydrogenase [Lysinibacillus sphaericus C3-41] Length = 393 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 192 QKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 Q V IG GLTE G+D+AA+++ + D Y ++G K W ++D FI+ A Sbjct: 110 QAKGVRIGAFGLTEPGAGSDVAAMSTTAVRDGDH-YVINGQKTWISLCDIADHFIVFAYT 168 Query: 250 EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + + F+V R S G + +K K G R+ T EL F + + N Sbjct: 169 DKSKKHHGISAFIVER-----SMAGFTSKAIKGKYGIRAGNTGELFFED---LRVPAENR 220 Query: 305 STGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 E KI + LD+ +V+ V L +A + Y R G + + ++ + Sbjct: 221 LGEEGEGFKIAMSALDNGRFTVAAGAVGLIQACLEASVKYCHERETFGKPIGEHQLVGQM 280 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++ + L +R+ ++ + E + A K+ C A +A++ Sbjct: 281 LANMDAGYQMSRLLVYRVGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQI 333 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 G GY +E +AR+ R S A I G+ Sbjct: 334 HGAYGYSDEYPVARYLRNSKAPVIYEGT 361 >gi|311743451|ref|ZP_07717257.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311312581|gb|EFQ82492.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GR-VGCF 256 L+E G+D AA+ + + D Y ++G K W +D + ++A+ GR + CF Sbjct: 127 LSEAHAGSDPAAMRTTAVRDGD-EYVINGAKAWTTHGGEADVYKVMARTSDTGGRGISCF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVP G+P GL + K+G S+ T + F + + D + L Sbjct: 186 LVPA----GTP-GLTADNPEQKMGLMSSTTATMLFEDVR--IPADRRLGEEGQGLSIALA 238 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD+ + ++ + +A+ A+ YA+ R G ++D + +AD+A + +A A Sbjct: 239 GLDAGRLGIAAVATGVAQGALDVALAYAKEREAFGRPIVDHQGLTFLLADMAAAVESARA 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D + + +A+ A+++A A V +A++ +GG+GY ++ + Sbjct: 299 TYLHAARLKDAGRPYARQASIAKLVA-------TDNAMRVTTDAVQVLGGAGYTKDFPVE 351 Query: 432 RHYRESPANSILLGS 446 R+ RE I G+ Sbjct: 352 RYMREVKVMQIFEGT 366 >gi|254284111|ref|ZP_04959079.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] gi|219680314|gb|EED36663.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K G Y L+G+K W + P +D +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLKAEK-RGGRYVLNGNKMWITNGPDADTYVIYAKTDPNAGSRGM 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++E SP +Q+L +K+G R + T EL F + +LG+ + M Sbjct: 189 TAFIVERDSPGFSRHQKL-DKLGMRGSNTCELVFEDCEVPAENVLGEEGRGVAVL--MSG 245 Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L Y + A++S V M L + I Y R G + +++ +AD+ ++AA A Sbjct: 246 LDY-ERAVLSGGPVGIMMACLDQVIPYIHDRKQFGQSIGKFQLIQGKVADMYTHLSAARA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + +A + D + ++AA + A + A + +A++ +GG+GYI E Sbjct: 305 LLYAVARACDRGEECRKDAAAVILFA-------AEKATQMALDAIQLLGGNGYINEFPTG 357 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 358 RLLRDAKLYEIGAGT 372 >gi|254506633|ref|ZP_05118774.1| isovaleryl-CoA dehydrogenase, (IVD) [Vibrio parahaemolyticus 16] gi|219550506|gb|EED27490.1| isovaleryl-CoA dehydrogenase, (IVD) [Vibrio parahaemolyticus 16] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 31/282 (10%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 AIG L ++E G+D+ ++ + D Y L+G+K W + P +D I+ A+ + G Sbjct: 126 AIGALAMSEPNAGSDVVSMQLKATLNGDH-YRLNGNKMWITNGPDADVIIVYAKTDSSAG 184 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 + + + + +G + + +K+G R + T EL F++ +LG++N + Sbjct: 185 SHGITAFIVERAFSGFSHAQRLDKLGMRGSNTCELVFNDCLVPVENVLGEVN------KG 238 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +++L+ LD + ++G M+ L I Y R G + + +++ +AD+ Sbjct: 239 VQVLMSGLDYERVVLAGGPLGIMQACLDLVIPYVHERKQFGKAIGEFQLVQAKVADMYTR 298 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + + +A + D ++ ++AA + + ++A + +A++ +GG+GYI Sbjct: 299 TNAARSYVYTVAAACDRGEATRKDAAGVIL-------YSAELATQLALDAIQLLGGNGYI 351 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 E R R++ I G+G + + +L G LFE+ Sbjct: 352 NEFPAGRLLRDAKLYEI--GAGTSEIRRIL----IGRELFEE 387 >gi|327314010|ref|YP_004329447.1| acyl-CoA dehydrogenase [Prevotella denticola F0289] gi|326944922|gb|AEA20807.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella denticola F0289] Length = 577 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E + YA+ R G +I P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D K+ R E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GGSG+I E R YR++ SI G+ V+ + + GT L + LE + Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467 Query: 476 LGSSGKKVITILRDSIS 492 L K LRD ++ Sbjct: 468 LACDCMKA---LRDRVA 481 >gi|302342718|ref|YP_003807247.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301639331|gb|ADK84653.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 385 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 34/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIY-CLSGHKWFLSSPMSDAFIMLA 247 PM V GLTE G+D + IT+ + DG Y LSG K F+++ + ++ Sbjct: 114 PMCDGRVIGAFGLTEPGAGSDPSGQITT---AVRDGDYWVLSGVKQFITTGSNAGLTIVT 170 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNT 294 + V FLVP+ GSP GL + ++K+G +++ TV+L +N Sbjct: 171 AYTDKSKKHRGVSAFLVPK----GSP-GLVVGKAEDKLGLKASDTVQLILEDCRVPAANM 225 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 G V+ ++ +I I A S+ R L EA+ + R G + Sbjct: 226 LGREGEGFRVAMTCLDAGRIGI----AAQSLGVARACLDEAVTFIDSREQFGRAISQFQG 281 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ IAD+A +I AA L A + + + EA+ A++ A +M + ++ Sbjct: 282 VRWRIADMATEIEAAELLCVNAALLKAQGQRFTAEASMAKLFAS-------EMVNRITSQ 334 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG G+ +E I RH+R++ +I G+ Sbjct: 335 CLQLHGGYGFCKEYDIERHFRDARVFTIYEGT 366 >gi|258570827|ref|XP_002544217.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704] gi|237904487|gb|EEP78888.1| isovaleryl-CoA dehydrogenase [Uncinocarpus reesii 1704] Length = 430 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 26/279 (9%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 142 NGTPEQKAKYLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYILNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ E G + + + + G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTEPTGGSKGITAFIVETTSKGFSCARKLDKLGMRGSNTGELIFEDLFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG +N +K+L+ L+ ++S M+ +L + Y R Sbjct: 261 PKENVLGTVN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFNT 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +AD+ +AA+ A ++ A D + E + + Sbjct: 315 PIAHNQLVQGKLADMYTKLAASRAYTYNTARQIDNSADSPEGPQIRTQDCAGAILYAAER 374 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ +GG+GYI E R R++ I G+ Sbjct: 375 ATECTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGT 413 >gi|228990463|ref|ZP_04150428.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM 12442] gi|228768989|gb|EEM17587.1| Acyl-CoA dehydrogenase domain protein [Bacillus pseudomycoides DSM 12442] Length = 405 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GLTE G+D+ A+ + K D Y L+G K W ++D F++ A+ + Sbjct: 123 FGLTEPNAGSDVVAMQTTAVKQGDH-YVLNGSKTWISLCDVADHFLIFAKTNPELKHRGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 CF+V R G+ + +K K+G R+ T E+ E LLG+ E Sbjct: 182 SCFIVERTFP-----GVSTKAIKGKLGIRAGNTGEVFLDEVKVPAENLLGEEG------E 230 Query: 311 DMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD+ +V+ ++ SL ++ Y R G + ++++ IA ++ Sbjct: 231 GFKIAMASLDNGRFTVAAGACGLIQASLEASVKYCEERKTFGKEIGKHQLVQQMIAKMSA 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ + L ++ +E K + E + A+ +A C A +A++ G GY Sbjct: 291 NLEISRLLVYKAGWLKNEGKRNTRETSLAKWIA-------CDAAFEAANDAVQVHGAYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 E + R+ R + A I G+ Sbjct: 344 SNEFPVERYLRNAKAPVIYEGT 365 >gi|146760115|emb|CAJ77661.1| acyl-CoA dehydrogenase [Mycobacterium chelonae] Length = 611 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 43/287 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSADSDDMFENIMHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLL---EDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ + E G P NG+ +++K+G + +AT EL G+L+ Sbjct: 224 TKGLSLFFVPKFIPNFETGEPGERNGVFVTNVEHKMGLKVSATCELSLGQHGVPAKGWLV 283 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG---ILIDQPVMK 356 G+++ + D+ + +++ + A+ YA+ R V G L D+ + Sbjct: 284 GEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKTR-VQGADMTQLTDKTAPR 342 Query: 357 RAIA---DIALDIAAATALS------FRLANSFDEAKS-------RSEEAAYAR-IMAPI 399 I D+ + A + + A +F +A + +EEA ++ PI Sbjct: 343 VTITHHPDVRRSLMTQKAYAEGLRALYLYATTFQDAVAAKAINGVEAEEAVRLNDLLLPI 402 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + A + E+++ GGSG++++ I ++ R++ +S+ G+ Sbjct: 403 IKGVGSERAYEKLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 449 >gi|33592628|ref|NP_880272.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33572274|emb|CAE41826.1| glutaryl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332382045|gb|AEE66892.1| glutaryl-CoA dehydrogenase [Bordetella pertussis CS] Length = 397 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 GLTE G+D + ++ K DG Y L+G+K W +SP++D F++ A+ +G++ Sbjct: 137 FGLTEPNHGSDPGGMETRATKTPDG-YKLTGNKMWITNSPIADVFVVWAKCVGGDFDGKI 195 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVE 310 F++ + ++ GL + K+G R++ T E+ E + ++ ++ GP Sbjct: 196 RGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVMDEVEVSEEQMMPGVSGLKGP-- 248 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALD 365 L+SA ++ + AEA H AR+ R G L ++++ +AD+ + Sbjct: 249 ----FTCLNSARYGIAWGALGAAEACWHTARQYTMDRKQFGRPLAANQLIQKKLADMQTE 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I RL DE + E + I K C A + A + +GG+G Sbjct: 305 ITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKALDIARLARDMLGGNGIS 357 Query: 426 EERSIARH 433 +E +ARH Sbjct: 358 DEFGVARH 365 >gi|222085090|ref|YP_002543620.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] gi|221722538|gb|ACM25694.1| acyl-CoA dehydrogenase protein [Agrobacterium radiobacter K84] Length = 592 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 161/403 (39%), Gaps = 60/403 (14%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV---RKQAHKIRAARLYLMAQLEAGHLM 152 KV W L R I G W+ P + H + A L + + Sbjct: 69 KVVLPDGWEKLYRDWIAGG-----WNGLTAPEEYGGQGLPHMLNVATLEMWNSASMAFGL 123 Query: 153 SPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +P++T ++ AL+ + + + K+ + E+ T + LTE G+D Sbjct: 124 APTLTMGAVEALVAHGSADLKSKYLAKLVTGEWAGT-------------MNLTEPHAGSD 170 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDA------FIMLAQVEGRVGC-----FLVP 259 + A+ ++ + +DG Y L G K F++ +A F++ + G FLVP Sbjct: 171 VGALRTRADRHNDGTYRLFGQKIFITWGDHEAAENIIHFVLARIPDAPAGTRGISLFLVP 230 Query: 260 RLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN--------TFGFLLGDLNVST 306 + L +DGS N L++K+G + T + + + +L+G+ N Sbjct: 231 KFLVNDDGSLGARNDYFAHSLEHKLGIHGSPTCTMIYGDGKYGDERGAVAWLVGEENKGL 290 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------HVSGGI--LIDQPVMKR 357 + M L I V+ + +AI YA+ R + G+ +I+ P + R Sbjct: 291 ACMFTMMNNARLAVGIQGVAIAEAATQKAIAYAKERTQGRAPGTTAFGMSPIIEHPDIAR 350 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAY----ARIMAPITKYWCCKMAPAVIA 413 + + + A+ + A + D + + +A Y A ++ PI K + V + Sbjct: 351 MLLTMKALTQGSRAICYACAEAIDMSHRDAGKARYWQERAALLTPIAKSFSTDAGVDVAS 410 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 ++ GG G+IEE AR R++ I G+ +D++ Sbjct: 411 LGIQVHGGMGFIEETGAARLLRDARIAPIYEGTNGIQAIDLVT 453 >gi|26788031|emb|CAD58772.1| novel protein similar to human isovaleryl Coenzyme A dehydrogenase (IVD) [Danio rerio] gi|47939423|gb|AAH71451.1| Isovaleryl Coenzyme A dehydrogenase [Danio rerio] Length = 418 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257 L ++E G+D+ ++ +K D Y L+G+K W + +D I+ A+ + V + Sbjct: 159 LAMSESNSGSDVVSMKLTAKKQGDH-YVLNGNKFWITNGSDADVLIVYAKTDPEAVARGI 217 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E G P Q+L +K+G R ++T EL F + +LG LN + Sbjct: 218 TAFIVEKGMPGFSSAQKL-DKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYVLMSGLD 276 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L L A V M+ L AI Y R G + +M+ +AD+ +++ + Sbjct: 277 LERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYLY 336 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + D+ +++ A + +C + A V + ++C+GG+GYI + + R Sbjct: 337 NVARACDKGHFSAKDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPMGRFL 389 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 390 RDAKLYEIGAGT 401 >gi|307325800|ref|ZP_07605000.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306888588|gb|EFN19574.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 390 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 44/290 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCF 256 + +TE+ G+D + I + + DG Y L+G KWF++ +D I+LA V + F Sbjct: 121 VAITEEHAGSDPSGIRTTATRDGDG-YVLNGEKWFVTVGDAADFLIVLAYVRPDNEPTMF 179 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-----GFLLGDLNVST----- 306 LV D G+ +R +++TF FL D+ V Sbjct: 180 LV-----DKDTPGVSVKRTPR-------------YTHTFVYEHPEFLFQDVRVGQDAVLG 221 Query: 307 --GPVEDMKILIYLDSAIM----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 G D+ + + +M ++ +L A+ +A+ R G +L+++ +++ IA Sbjct: 222 RIGEGYDLTRDWFTEERLMIAARTIGAAERALRLAVDWAKEREQGGDVLMNRQLIQGMIA 281 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D +IA A + ++A FD+ R A K + + ++ ++ G Sbjct: 282 DSVTEIATNRAFTHQVAWEFDQGGDRK----TLHAKAATAKLAASEASNRIVDRCVQIFG 337 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFS 470 G GY+ + + R +RE + I G+ L + N E G + L S Sbjct: 338 GRGYMRDMPVERLWRELRVDRIWEGTSEIQRLVIAN--EVGKRGLDDLLS 385 >gi|255318739|ref|ZP_05359966.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|255304237|gb|EET83427.1| acyl-CoA dehydrogenase [Acinetobacter radioresistens SK82] Length = 384 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K +++ +P + F ++A+ G + Sbjct: 124 LTEPESGSDAASLRTTAVKNGD-FYILNGTKRYITNAPHAATFTVMARTNPEIKGSGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 FLV E +P+ + ++ K+G + + T ++ F N L+G + G Sbjct: 183 AFLV----EADNPS-ITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + + V +AE A+ YA R G + +++ +AD +I Sbjct: 237 MKVL---DKGRLHIGAYSVGVAERMLDDALRYAVERKQFGQPIASFQLIQAMLADSKAEI 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D+ ++ S EA+ +K + +M V ++ GG+GYI Sbjct: 294 YAAKCMVLDAARRRDQGENISTEAS-------CSKMFATEMCGRVADRCVQIHGGAGYIS 346 Query: 427 ERSIARHYRE 436 E SI R YR+ Sbjct: 347 EYSIERFYRD 356 >gi|167624816|ref|YP_001675110.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354838|gb|ABZ77451.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P T IG L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + + Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F + + + N+ G +K+L+ LD + Sbjct: 195 RGSKGFSTAQKLDKLGMRGSNTCELVFEDCE---VPEENILGGLNNGVKVLMSGLDYERV 251 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +SG + + A + Y R G + +++ +AD+ + AA + + +A Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R++ Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364 Query: 439 ANSILLGS 446 I G+ Sbjct: 365 LYEIGAGT 372 >gi|121607872|ref|YP_995679.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552512|gb|ABM56661.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2] Length = 381 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 20/266 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP+ + + +TE G+D++ I + + +DG + L+G K W ++P++D +LA Sbjct: 109 APLLRAGLRPAYCITESDAGSDMSGIRTTATRTADG-WDLNGAKLWIHNAPVADLAFVLA 167 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---- 300 + + G + + D G+ ++K+G R++ EL F LLG Sbjct: 168 RTDPAAGKRGMSIFIVDCHLAGVSKGAKEHKMGQRASQVGELHFERVQLPREALLGPEGR 227 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++ ++ ++ I A ++V + L A+ YA R + + ++ +A Sbjct: 228 GFHIMMSALDKGRVGI----AALAVGIAQAGLEAALDYALSRKQFSSRIAEFQGIQWMLA 283 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A DI AA L +A R E A I + K + A A A++ G Sbjct: 284 DMAQDIQAARLL-------VHDAAKRLEAGDRASIACSMAKCFASDTAVRHSANAVQIFG 336 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 GSGYI + R YR++ I G+ Sbjct: 337 GSGYIRGYEVERLYRDAKITQIYEGT 362 >gi|319791032|ref|YP_004152672.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315593495|gb|ADU34561.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 392 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 33/275 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLSSPMSDAFIMLA--QVEGRVG 254 L +TE GG+D+AA+ + ++ S G Y L+G K F++S M +I +A EGR G Sbjct: 124 LAITEPGGGSDVAALRTTARRESAGDGDHYVLNGEKTFITSGMRAHWITVAVRTGEGR-G 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTG 307 + LL G GL +RL K+G + T L F N +LLGD + G Sbjct: 183 AGGISMLLVPGDALGLSRKRL-TKMGWWCSDTATLHFDNVRVPARYLLGDEGAGFRMIMG 241 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +I + A ++ + L EA+ ++R R G LI+ ++ + D+ + IA Sbjct: 242 NFNGERIGL----AAGALGFAQACLDEALAWSRERKTFGAALIEHQAVRHKLVDMQMRIA 297 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-------EAMECIG 420 + A ++ A+ + EAA R AP C + +A++ +G Sbjct: 298 STEAWLEAVS-----AEGDAHEAA-GRFNAPEWVAQVCMLKNHATQTMQFCADQAVQILG 351 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G G++ R YRE +++G G ++ L Sbjct: 352 GMGFMRGTVSERIYRE--VKVMMIGGGAEEIMKEL 384 >gi|157429080|gb|ABV56602.1| acyl-CoA-like dehydrogenase [Kutzneria sp. 744] Length = 385 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 44/274 (16%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCF 256 L +TE G+DI+A+ T+ G+ DG + L+G K F+S+ S D ++++A Sbjct: 124 LAITEPDAGSDISAMRTTAVGR---DGGWQLNGSKTFVSNGHSADLYLVVALTPTDTRTA 180 Query: 257 LVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296 R L+ + G+ RL +KIG ++ T EL F + FG Sbjct: 181 APARGTSASMLVVEADRAGVKRGRLIDKIGMKALDTSELFFDDVAVPARNLLGRPGRAFG 240 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 +L+ +L E M I I +++ LAE + Y +R V G + + Sbjct: 241 YLMRNL-----VQERMWI------GISALAAAERVLAETLEYVGKRSVFGMAVGQHQSNR 289 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A + A + R ++++ + +E+AA + K+W ++ V+ + + Sbjct: 290 HHLAELATAVEVARSHCDRAILAYNDRRLSAEDAA-------MVKWWNTELCQQVVTQCL 342 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG G++ E +AR Y ++ +I G+ M Sbjct: 343 QLHGGYGFVRESVVARAYLDTRVQTIYGGTTEVM 376 >gi|156371749|ref|XP_001628924.1| predicted protein [Nematostella vectensis] gi|156215913|gb|EDO36861.1| predicted protein [Nematostella vectensis] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 35/267 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG 254 G L+E+ G+D A+ + + DG + L+G K W ++ + F+++A V EG G Sbjct: 124 GFCLSEESSGSDAFALKTVALE-KDGHFVLNGSKMWITNAEYAGVFLVMANVNPSEGYKG 182 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP 308 F+VPR GL + ++K+G R+++T + F N +LG++ Sbjct: 183 ITTFIVPR-----ETPGLSIGKKEDKLGIRASSTCPVHFDNVKVVPSSSVLGEVGHGYKY 237 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYA-RRRHVSGGILIDQP-VMKRAIAD 361 M L+ + + + LA+ + Y RR I +Q M+ IA+ Sbjct: 238 AIGM-----LNEGRIGIGAQMLGLAQGCFDHTVPYTHERRQFGRSIWSNQAWAMQHQIAE 292 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + I AA L + A + E A A KY+ ++A ++ ME +GG Sbjct: 293 VRTKIEAARLLVYNAARRKEAGLPVVREGAMA-------KYFASEVATLTTSKCMEWMGG 345 Query: 422 SGYIEERSIARHYRESPANSILLGSGN 448 G+ + I ++YR+ +I G+ N Sbjct: 346 VGFTKSYPIEKYYRDCKIGTIYEGTTN 372 >gi|329893922|ref|ZP_08269957.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] gi|328923377|gb|EGG30694.1| Acyl-CoA dehydrogenase [gamma proteobacterium IMCC3088] Length = 388 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++T + D Y L+G+K W + P ++ +++ A+ + G + Sbjct: 129 LAMSEPGAGSDVVSMTLRADDAGDH-YVLNGNKMWITNGPDANVYVIYAKTDPEAGSRGI 187 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++E SP Q+L +K+G R + T EL F + +LG V G M Sbjct: 188 TAFIVERDSPGFSRAQKL-DKLGMRGSNTCELVFEDCKVPKSHVLG--QVGRGVQVLMSG 244 Query: 315 LIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L Y + A++S V M+ L + Y R G + + +++ IAD+ + ++ + A Sbjct: 245 LDY-ERAVLSGGPVGIMQACLDVVVPYIHERKQFGQAIGEFQLIQGKIADMYVALSTSRA 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +ANS D + ++AA + + + A + +A++ +GG+GYI + + Sbjct: 304 YLYTVANSLDRGEESRKDAAGVIL-------YTAEKATQMALDAIQLLGGNGYINDYATG 356 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 357 RLLRDAKLYEIGAGT 371 >gi|323453824|gb|EGB09695.1| hypothetical protein AURANDRAFT_24725 [Aureococcus anophagefferens] Length = 421 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 28/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LG+TE G+D A I + K D Y ++G K F+++ M+D I+ A+ + G V Sbjct: 162 LGMTEPSAGSDFANIKTTAVKDGDD-YVINGSKVFITNGWMADVTIVCAKTDASKGAHGV 220 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMK--- 313 L + G K+G ++ T EL F DL V + E+ K Sbjct: 221 SLFLIEDGMKGFTKGNKLEKMGMKAQDTCELFFE--------DLRVPKSALLGEEGKGFY 272 Query: 314 -ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ L + ++ M VS AEA+ Y R G L + V+ +A++ DI Sbjct: 273 AVMSELPQERLLIADMGVSAAEAVFEWTRDYTMDRSAFKGKLSNLQVVGHKLAEMKTDIC 332 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A D + + + A + KYWC + + ++ GG GY+ E Sbjct: 333 VGRAF-------VDNCIALHSQRKLDSVQASMAKYWCTDLQCKIADAGVQLHGGWGYMWE 385 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + + + + I G+ M Sbjct: 386 YDVCKAFVDGRVQPIYGGANEIM 408 >gi|163746633|ref|ZP_02153990.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45] gi|161379747|gb|EDQ04159.1| acyl-CoA dehydrogenase [Oceanibulbus indolifex HEL-45] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 22/258 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ ++ ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRCERTNEG-YTLNGTKAFISGGGYSDAYVTMVRTSDDGAKGVSTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 +EDG+P GL + L++K+G RS T ++F + +G N+ + K + Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWRSQPTALVQFDDC---KIGAENLVGEEGKGFKYAMAG 236 Query: 318 LDSAIMSVS-----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +++S + +L + + Y R G + ++ +AD+ +++ AA Sbjct: 237 LDGGRLNISACSLGAAQTALNKTLDYMGDRKAFGQSIDQFQGLQFRLADMEIELQAARTF 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D A A + K + + V+ + ++ GG GY+ + I + Sbjct: 297 LRQAAWKLDTG------APDATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEK 350 Query: 433 HYRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 351 LVRDLRVHQILEGTNEIM 368 >gi|126731871|ref|ZP_01747675.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37] gi|126707698|gb|EBA06760.1| putative acyl-CoA dehydrogenase [Sagittula stellata E-37] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 19/260 (7%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG 254 V +G+TE G+D+ ++ + ++ + Y ++G K W ++D ++ A+ Sbjct: 116 VITAIGMTEPGTGSDVRSMKTFAKRQGNDSYVINGQKSWITWGGVADYVLVFAKTSEGTS 175 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 + L D G R + K+G EL F + +LG+ TG Sbjct: 176 SDSISAFLVDTKTPGFRVGRKERKMGRNGAPNHELFFEDMVVPADCMLGE--EGTGFKGC 233 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MKI LD +V+G + LA+ A+ +A+ R G + M+ AD+ + Sbjct: 234 MKI---LDLNRPTVAGSSLGLAQGALDTALAFAKERVQFGRAVSQFQGMQFKFADMHMKT 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA AL + + D S + + ++ ++K + +A V EA++ +G +GY + Sbjct: 291 EAARALLYSVCAEID-----SGDHSRLAMLGAVSKCYVTDVAMEVTTEAVQAMGSAGYSK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ N IL G+ Sbjct: 346 EYPVERMMRDAKLNQILEGT 365 >gi|157104647|ref|XP_001648504.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108880277|gb|EAT44502.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 405 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W + I+ A + + Sbjct: 145 FALSEPGNGSDAGAASTTATLKGD-RWVLNGTKCWISGGYEAGNAIVFATTDKSLKHKGI 203 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP G+ + ++K+G R ++T +L F + + N+ P K Sbjct: 204 STFVVPM-----DSKGISRGKKEDKMGLRGSSTCQLIFEDC---EIPKDNLLGQPGYGFK 255 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + ++G + +A+A + YA +R G + ++ IAD++L + Sbjct: 256 IAMQGLDTGRIGIAGQALGIAQASLECAVDYANKRVAFGKPISKLQAIQMKIADMSLRVE 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D K ++EAA A++ A T +C + ++ +GG GY+ + Sbjct: 316 SARLLTWRAAWLKDNKKPFTKEAAQAKLAASETATFCAH-------QCIQILGGMGYVSD 368 Query: 428 RSIARHYRESPANSILLGS 446 R+YR++ I G+ Sbjct: 369 MPAERYYRDARITEIYEGT 387 >gi|78043629|ref|YP_360435.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77995744|gb|ABB14643.1| acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 580 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 34/267 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258 LTE G+D A ++ DG Y L+G K F+++ +D FI+ A+V+G + F+V Sbjct: 146 LTEPGSGSDALAAKTKAVLSEDGKYYILNGTKQFITNAGFADVFIVYAKVDGDKFTAFIV 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311 R G+ + + K+G + ++T V++ N G V G V Sbjct: 206 ERDFP-----GVSFGPEEKKMGIKGSSTRQVILEDVKVPVENVLG------EVGKGHVIA 254 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 IL +++L+ A+ YA R G + + ++K I +A AA Sbjct: 255 FNILNIGRFKLGAGCAGSCKLALSTAVKYANERSQFGQPIANFGLIKNKIGRMAAYTFAA 314 Query: 370 TALSFRLANSFDE------AKSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECI 419 ++ +R A D+ KS +E A YA I I K + + V+ E ++ Sbjct: 315 ESMVYRTAGMMDKILGDVKGKSGAEVAKGIEEYA-IEYSINKVFASEALDFVVDETVQIF 373 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E R YR++ N I G+ Sbjct: 374 GGYGYTQEYPAERMYRDARINRIFEGT 400 >gi|83859089|ref|ZP_00952610.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83852536|gb|EAP90389.1| putative acyl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 389 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 32/273 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGR----V 253 LG++E GG+D+AA+ + + D Y ++G K W + +D +LA +G+ Sbjct: 123 LGVSEPGGGSDVAAVKTTAKSDGDD-YIINGTKMWITNGLKADWCCLLANTSDGKPHESK 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 +VP L G+ Q++ +KIG S+ T +L F + + +GD G + Sbjct: 182 SLIMVPMDLP-----GIEKQKI-HKIGMHSSDTAQLFFDDVRVPKRYRIGD--EGAGFIY 233 Query: 311 DM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M + IY A S+ + + I Y R RH G L+D + +A++ ++ Sbjct: 234 QMLQFQEERIY--GAASSLKNLDKQIDLTIEYTRDRHAFGQPLLDNQAIHFRLAELRTEV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +L +R + F E K ++ +A + K C ++A V ++ GG GY Sbjct: 292 ELLRSLVYRCVDDFVEGKDITK-------LASMAKLKCGRLAREVSDSCLQFWGGMGYTA 344 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++R +R+ SI G + ++L ++ LE Sbjct: 345 DNLVSRSFRDGRLISI-GGGADEIMLGIIAKLE 376 >gi|299536969|ref|ZP_07050274.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] gi|298727549|gb|EFI68119.1| acyl-CoA dehydrogenase [Lysinibacillus fusiformis ZC1] Length = 382 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 37/288 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 W PK + +Y + +TE G+D+A I + I DG Y ++G K Sbjct: 111 WLPKCVTGDY-------------ITAIAMTEPGTGSDLANIKTSA--IRDGDHYIVNGQK 155 Query: 233 WFLSSPMSDAFIMLA-----QVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F+++ + ++A Q E + G L+ ++E+G+P G R K+G + T Sbjct: 156 TFITNGIHTNLAVVAVKTNPQAEKKHRGISLL--VIEEGTP-GFTKGRQLEKVGMHAQDT 212 Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH 343 EL F + LLG+ + + L AI + + L + Y + R Sbjct: 213 AELYFEDCRVPVQNLLGEEGKGFHYMMEKLQQERLAVAIAAQTAAEDMLTLTLDYVKSRQ 272 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKY 402 G + D + IA++A I L SF E+ A + + KY Sbjct: 273 AFGKTIGDFQNTQFKIAEMATKI--------ELGKSFLESLIEEHIAGNDVVTKVSMAKY 324 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W + A + + M+ GG GY+EE IAR YR+ P SI G+ M Sbjct: 325 WITENARDLATQCMQLHGGYGYMEEYKIARRYRDIPVMSIYAGTNEVM 372 >gi|253700710|ref|YP_003021899.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21] gi|251775560|gb|ACT18141.1| acyl-CoA dehydrogenase domain protein [Geobacter sp. M21] Length = 592 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 48/360 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + +DG Y L+G K F ++ ++ + + A+V+ FLV Sbjct: 147 LTEPDSGSDALGAKATATLSADGSHYLLNGTKQFTTNGSIASLYTIFAKVDKEHFTAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R E G+ + K+G + ++T ++ N +LG+ + G +L Sbjct: 207 ERGFE-----GVSVGPEEKKMGIKGSSTTQVILDNAKVPVQNVLGE--IGKGHKIAFNVL 259 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A+ + + +LA+ I YA R G + +K IAD+ + AA + Sbjct: 260 NVGRFKLGAAVTGAA--KGALADGIRYANLRKQFGRTIGSFGAIKEKIADMTAALFAAES 317 Query: 372 LSFRLA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +RLA N +D + EE A + + K +C ++ V E + Sbjct: 318 MVYRLAGLIDQRLATIPRDTPNYYDVYQRAIEEYA---MECAVAKVFCSEVLAFVADEVV 374 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST--LEQ 474 + GG G+++E R+YR+ N I G+ ++ LL GT L + L+Q Sbjct: 375 QIHGGYGFVQEYPAERYYRDERINRIFEGTN-----EINRLLIPGTLLARAMKGEIPLQQ 429 Query: 475 DLGSSGKKVITI----LRDSISLCKEDKGLARFLTEKIALASSAAALYRAGMNDIADVFL 530 + + + ++T L DS+ E L + +A SAA ++AG+ + +V L Sbjct: 430 EALKAFESLMTPSFEELDDSVPFAAEKALLVGLKQAFLVVAGSAAQKFQAGIKEEQEVLL 489 >gi|126698638|ref|YP_001087535.1| butyryl-CoA dehydrogenase [Clostridium difficile 630] gi|255100090|ref|ZP_05329067.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-63q42] gi|255305980|ref|ZP_05350152.1| butyryl-CoA dehydrogenase [Clostridium difficile ATCC 43255] gi|255655072|ref|ZP_05400481.1| butyryl-CoA dehydrogenase [Clostridium difficile QCD-23m63] gi|296451059|ref|ZP_06892801.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] gi|296880588|ref|ZP_06904550.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] gi|115250075|emb|CAJ67895.1| Butyryl-CoA dehydrogenase [Clostridium difficile] gi|296260066|gb|EFH06919.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] gi|296428542|gb|EFH14427.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] Length = 378 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + DG Y L+G K F+++ ++ D ++++A + G Sbjct: 122 FGLTEPNAGTD--ASGQQTTAVLDGDEYILNGSKIFITNAIAGDIYVVMAMTDKSKGNKG 179 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + ++E G+P G + + K+G R +AT EL F + + N+ + KI + Sbjct: 180 ISAFIVEKGTP-GFSFGVKEKKMGIRGSATSELIFEDC---RIPKENLLGKEGQGFKIAM 235 Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ + LA E + Y + R G L + +AD+ + + AA Sbjct: 236 STLDGGRIGIAAQALGLAQGALDETVKYVKERVQFGRPLSKFQNTQFQLADMEVKVQAAR 295 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A + D K EAA A++ A T A V +A++ GG GY + + Sbjct: 296 HLVYQAAINKDLGKPYGVEAAMAKLFAAET-------AMEVTTKAVQLHGGYGYTRDYPV 348 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 349 ERMMRDAKITEIYEGT 364 >gi|302545213|ref|ZP_07297555.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302462831|gb|EFL25924.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 388 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 37/280 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252 GLTE GG+D A + + + G + ++G K F+++ +D A I + V R Sbjct: 125 FGLTEPGGGSDAGATRTTARLDEATGEWVINGTKCFITNSGTDITALITVTAVTDRTEDG 184 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVST 306 + +VP G+P GL +K+G ++ T EL F++ LLGDL Sbjct: 185 RPKISSIIVP----SGTP-GLSVAAPYSKVGWNASDTRELSFADCRVPAANLLGDLG--R 237 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + ++IL D +++S + LA E++ YAR R G + ++ IAD Sbjct: 238 GYAQFLRIL---DEGRIAISALATGLAQGCVDESVSYARTREAFGRPIGANQAIQFKIAD 294 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + A R+A + +A SR + A I K + ++A EA + GG Sbjct: 295 MEMRAHMA-----RVA--WRDAASRLVSGESFKKEASIAKLYSSEVAVTNAREATQIHGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G++ E +AR +R+S + +G G + V +L E G Sbjct: 348 YGFMNEYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 385 >gi|239503627|ref|ZP_04662937.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii AB900] Length = 383 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + K D Y L+G K F++ +P + F ++A+ G + Sbjct: 124 LTEPDAGSDAASLKTSAVKDGD-FYILNGTKRFITNAPHAGVFTVMARTNFDIKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V D G+ + K+G + T ++ F N L+G + G Sbjct: 183 AFIV-----DSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTA 236 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK+L L A +SV L ++++YA R G + +++ +AD +I AA Sbjct: 237 MKVLDKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAQFQLIQAMLADSKAEIYAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D ++ S EA+ A++ A +M V ++ GG+GYI E + Sbjct: 297 KCMVLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRCVQIHGGAGYISEYA 349 Query: 430 IARHYRE 436 I R YR+ Sbjct: 350 IERFYRD 356 >gi|78042926|ref|YP_360557.1| short-chain specific acyl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77995041|gb|ABB13940.1| acyl-CoA dehydrogenase, short-chain specific [Carboxydothermus hydrogenoformans Z-2901] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 22/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 +TE G+D+A++T++ I DG Y L+G K W +P++D ++ A + Sbjct: 123 FAITEPNAGSDVASMTTKA--IRDGDYYILNGSKMWISLAPVADIALVYAYTDPSRRAKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVE 310 + + D + G+ + ++ K+GN ++ + F N LLG + ++ Sbjct: 181 MSAFIVDLNSEGVTIEPIEEKLGNWASPVGAITFENVRVPGENLLGQEGQGFKICMQQLD 240 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D + L SA +V + L A+ YA R G + +++ IA + ++I AA Sbjct: 241 DTR----LASAAGAVGVAQACLDAAVEYANTREQFGQKVGQFQMIQDWIAQMVVEIEAAR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A D+ + E + A++ A T C A+ GY EE + Sbjct: 297 LLTYRAAFLKDKGVPSTRETSMAKLFAGETASKCADY-------ALRIFSAYGYSEEYPV 349 Query: 431 ARHYRESPANSILLGSGN 448 AR++R++ I+ G+ N Sbjct: 350 ARYFRDAKYYQIVEGTSN 367 >gi|294651514|ref|ZP_06728826.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292822602|gb|EFF81493.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 12/274 (4%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 113 PAIRGEYVASIAVSEVHAGSDVAAIKTTAKKEGDD-YVINGSKMWITNSLQADFFCLLAN 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 ++ G+ + NK+G RS T ++ F N +L+G + Sbjct: 172 TSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVLQRYLVGAEGMG 231 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + +V G+ + + I YA+ R G LI+ + A++ + Sbjct: 232 FMMQMMQFQEERMWACANAVGGLEKVIQQTIDYAKERTTFGQPLINNQYVHFRFAELMTE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A AL+++ ++ + ++A + K ++ V ++ GG+G++ Sbjct: 292 VEALKALTYQACEQHIAGENVT-------MLASMAKLKSGRLTREVADTCLQYWGGNGFM 344 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++ YR+ SI G+ M+ + L++ Sbjct: 345 WDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378 >gi|134103664|ref|YP_001109325.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291004801|ref|ZP_06562774.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133916287|emb|CAM06400.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 614 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 50/292 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + +DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVRQADGSWHIDGVKRFITSADQDMTENIMHLVLARPEGEGVET 223 Query: 253 ------VGCFLVPRL---LEDGSP---NGLCYQRLKNKIGNRSNATVELEFSN----TFG 296 + FLVP+ E G P NG +++K+G ++AT EL F G Sbjct: 224 KPGTKGLSLFLVPKFHFDSETGEPGERNGAFVTNVEHKMGLNASATCELTFGQHGTPAKG 283 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---- 350 +LLG+ V G + +++ Y + ++ + A+ YA+ R V G L Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIGTLSTGYLNALDYAKER-VQGADLTKATD 340 Query: 351 ---------DQPVMKRAI---ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR---- 394 + P ++R + A + A + + + K E+ A A Sbjct: 341 KTAPRVPITNHPDVRRILMLQKAYAEGLRAVYLYTGTYQDQVAQGKGAGEDVALAEAVND 400 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ PI K + A ++ +++ +GGSGY+++ I ++ R++ +S+ G+ Sbjct: 401 LLLPIVKGVGSERAYEMLTLSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGT 452 >gi|148224176|ref|NP_001086834.1| long-chain acyl-CoA dehydrogenase [Xenopus laevis] gi|50418371|gb|AAH77524.1| Acadl-prov protein [Xenopus laevis] Length = 444 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 41/281 (14%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ MSD I++ Sbjct: 173 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMSDVVIVV 230 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294 A E R + L D G R KIG ++ T EL F + Sbjct: 231 AVTNREARTPAHGISLFLVDNGTKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQ 290 Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 F +L+ +L P E + I A M+++ E +Y ++R G + Sbjct: 291 ENKGFYYLMAEL-----PQERLLI------ADMALASCEFMFEETRNYVKQRKAFGKTIA 339 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++ +A++ I L N A+ R + A A + KYW + Sbjct: 340 HLQTVQHKLAELKTQICVGRTF---LDNCLQLHAEKRLDSAT-----ASMAKYWASDLQN 391 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V + ++ GG GY+ E IA+ Y +S I G+ M Sbjct: 392 TVATQCLQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIM 432 >gi|88813675|ref|ZP_01128903.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] gi|88789062|gb|EAR20201.1| isovaleryl-CoA dehydrogenase [Nitrococcus mobilis Nb-231] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 33/288 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ +G L ++E G+D+ A+ + K D Sbjct: 108 TPAQKHAYLPKLLSGEH--------------VGALAMSEPGAGSDVVAMRLRADKQGDH- 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P +D ++ A+ + G + + + G + +K+G R + Sbjct: 153 YRLNGTKMWITNGPEADTLVVYAKTDPAAGSKGITAFIVERGYQGFDTAQKLDKLGMRGS 212 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHY 338 T EL F++ +LG+ N G + M L Y + AI++ M+ L A+ Y Sbjct: 213 DTCELVFADCRVPAENVLGEENAGVGVL--MSGLDY-ERAILAAGPLGIMQACLDTALPY 269 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + + +++ +AD+ + A A + + + D + ++AA A + Sbjct: 270 THERQQFGQPIGEFQLIQAKLADMYTHLQACRAYVYAVGAACDRNDATRKDAAGAIL--- 326 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + EA++ +GG+GYI E + R R++ I G+ Sbjct: 327 ----YAAERATQMALEAIQILGGNGYINEYPVGRLLRDAKLYEIGAGT 370 >gi|239828253|ref|YP_002950877.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] gi|239808546|gb|ACS25611.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. WCH70] Length = 594 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 65/358 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W ++ +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G+ + K+G +S++T L + LLG+ V G V IL Sbjct: 210 ERDFP-----GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENLLGE--VGKGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368 + +V G + +L + YA +R QP+ K A +A + A Sbjct: 263 NIGRYKLGVGAVGGAKRALEITLQYANQRQ-----QFKQPISKFTLTQEKFATMASRLYA 317 Query: 369 ATALSFRLANSFDEAKSRSEE-------------AAYARIMAPITKYWCCKMAPAVIAEA 415 + +R FDE S +E A YA I + K++ + ++ E Sbjct: 318 TESSVYRTVGLFDERMSLLDEEKAKDGKEIAKSIAEYA-IECSLNKFFATETLDYIVDEG 376 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTN 463 ++ GG G+++E I R YR+S N I G+ L V L LL+K Sbjct: 377 VQIHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLLQKAQQ 436 Query: 464 LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521 L E+L +++G + +++K L R +KIAL ++ A + G Sbjct: 437 LQEELMMLAPEEVGD-------------GVLEQEKYLVRN-AKKIALMTAGLAAQKFG 480 >gi|163736443|ref|ZP_02143862.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] gi|163743311|ref|ZP_02150692.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161383499|gb|EDQ07887.1| glutaryl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161390313|gb|EDQ14663.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] Length = 406 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K +DG Y L+G K W ++P++D F++ A+ E G++ Sbjct: 148 FGLTEPDAGSDPAGMKTRAEK-TDGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ + ++ GL ++ NK R++ T E+ G +GD + VE +K Sbjct: 207 FVLEKGMK-----GLSAPKIANKASLRASITGEIVMD---GVEVGD-DALLPHVEGLKGP 257 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AEA +A R R G L + + + +A++ +I Sbjct: 258 FGCLNRARYGISWGAMGAAEACWHAARQYGLDRKQFGRPLANTQLFQLKLANMQTEITLG 317 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DEA + E M I K C A + A + GG+G E Sbjct: 318 LQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARHARDMHGGNGISLEFG 370 Query: 430 IARH 433 + RH Sbjct: 371 VIRH 374 >gi|196016826|ref|XP_002118263.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens] gi|190579164|gb|EDV19266.1| hypothetical protein TRIADDRAFT_33900 [Trichoplax adhaerens] Length = 374 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 30/263 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVG--C 255 L+E+ G+D A+ + + D Y ++G+K W S+ M+ AF+++A EG G C Sbjct: 117 LSEEGSGSDAFAMKTTALRSGDH-YIINGNKLWITSAHMAGAFLVMANAAPEEGYKGITC 175 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATVELE-----FSNTFGFLLGDLNVSTGP 308 F+V D G+ R + K+G SN V E SN G + + Sbjct: 176 FIV-----DADTPGVSVPRREEKLGQHAVSNCPVTFENVKVPASNIVGEIGSGYKIIAST 230 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + +I + A V + L I Y R G L D M+ IA+ + + A Sbjct: 231 LNEGRIGV----AAQMVGAAQGILDHVIPYTMERKQFGKRLFDFQAMQHQIAEATVQVEA 286 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++ A + +EAA A KY+ +MA + + ++ +G GY+++ Sbjct: 287 ARLLAYNAARLHECNMPYVKEAAMA-------KYYSTEMACQIGLKGIKWMGALGYMKDF 339 Query: 429 SIARHYRESPANSILLGSGNAMV 451 I + R+ +I G+ N M+ Sbjct: 340 PIEKFLRDIIPGTIYEGASNVML 362 >gi|170051570|ref|XP_001861823.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167872760|gb|EDS36143.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] Length = 453 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 28/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A ++ D + L+G K W + I+ A + + Sbjct: 193 FALSEPGNGSDAGAASTTATLKGDR-WVLNGTKCWISGGYEATNGIVFATTDKSLKHKGI 251 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP GL + ++K+G ++T +L F + + N+ P K Sbjct: 252 SAFVVPM-----DSKGLSRGKNEDKLGLNGSSTCQLIFEDC---EIPKDNLIGQPGYGFK 303 Query: 314 ILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD+ + V+G + +A+A + YA +R G + +++ IAD+++ + Sbjct: 304 IAMQSLDAGRIGVAGQALGIAQASLECAVDYANKRTAFGKPISKLQMIQSKIADMSVRLE 363 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L++R A D ++EAA A++ A T +C + M+ +GG GY+ + Sbjct: 364 SARLLTWRAAWLKDNKHPFTKEAAQAKLAASETATFCAH-------QCMQVLGGMGYVTD 416 Query: 428 RSIARHYRESPANSILLGS 446 R+YRE+ I G+ Sbjct: 417 MPAERYYREARITEIYEGT 435 >gi|221069265|ref|ZP_03545370.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714288|gb|EED69656.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 30/287 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE G+D +A+ + + G Y ++G K F++S + D I++A Sbjct: 111 PLAQGQMLGAFCLTEPHVGSDASALRTTAVR-DGGDYVINGVKQFITSGKNGDVAIVIAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP +P G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKKGMSAFIVPTR----NP-GYQVARLEDKLGQHSSDTAQINFENCRIPAANLIG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ Y++ R G + + + Sbjct: 225 AEGEGYRIALSALEGGRIGI----AAQSVGMARAAFECALQYSKERESFGQPIFNHQAVG 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD A I AA L + A+ D +EAA A++ A +MA V + A+ Sbjct: 281 FRLADCATQIEAARQLIWHAASLRDAGLPCLKEAAMAKLFAS-------EMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + +GG G + + + R YR+ I G+ + + + L T Sbjct: 334 QTLGGYGVVSDFPVERIYRDVRVCQIYEGTSDVQKILIQRALATSTG 380 >gi|72548349|ref|XP_843378.1| acyl-CoA dehydrogenase [Leishmania major strain Friedlin] gi|323363895|emb|CBZ12901.1| putative acyl-CoA dehydrogenase [Leishmania major strain Friedlin] Length = 412 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/348 (22%), Positives = 152/348 (43%), Gaps = 46/348 (13%) Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170 +PVV K+A + A LE G + P+V+ V + Sbjct: 58 DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 ++A R+Y P + K +V LTE G+D A+ ++ +K + ++G Sbjct: 118 FFNFANDAQRRKYLP----KLAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171 Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K ++++ + F+++A V+ G CF+V + +G+ R +NK+G R++ Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETSGVSVVRTENKLGIRAS 227 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 +T EL F N + + NV + KI I L+ + + + +A+ + Y Sbjct: 228 STAELRFENV---EVSEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +R G ++ D M+ A+ A+++ AA + + + + ++AA A Sbjct: 285 LFQRKQFGKLIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ +A + A+E GG G++++ + R YR++ +I G+ Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385 >gi|320450263|ref|YP_004202359.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320150432|gb|ADW21810.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] Length = 380 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 37/287 (12%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SP 238 R Y P + K + GLTE G+D ++ ++ + D Y L G K F+S + Sbjct: 102 KRRYVPR----LAKGEILGAYGLTEPEAGSDAGSLRTRAYRDGDH-YVLEGQKTFISHAN 156 Query: 239 MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEF 291 ++ F++ A+ + G FLV R +G+ LK K+G R+ T V LE Sbjct: 157 VAQVFLIFAKTDPDKGSRGITAFLVER------EDGVRTTPLKGKLGLRAADTGMVFLE- 209 Query: 292 SNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 G + V + KI L LD+ +S++ V L + ++ YA+ RH Sbjct: 210 ----GVRIPKDRVLGEEGQGFKIALSTLDTGRVSLAAGAVGLMQRALDLSLRYAKERHQF 265 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G + +++ +A + LD+ A+ L++ +A ++ + + A + K + Sbjct: 266 GRPIASFQLVQAHLAQMKLDLEASRLLTY-------QAVAKKLKGERYTLEASMAKLFAS 318 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + A V A++ GG G+ EE +AR YR++ ++ G+ L Sbjct: 319 EAANRVAYRAIQVHGGYGFFEEYEVARLYRDARILTLYEGTSEVQTL 365 >gi|229543304|ref|ZP_04432364.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229327724|gb|EEN93399.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 594 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 57/319 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D + + + G Y L+G K W ++ +D F + AQV+G + F+V Sbjct: 150 LTEPSSGSDARSAKTVARLNEAGTHYILNGEKQWITNAGFADVFTVYAQVDGDKFTAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 R G+ + K+G +S++T L +L D+ V PVE++ Sbjct: 210 ERTFP-----GVSTGAEEKKMGIKSSSTRTL--------ILEDVPV---PVENVLGEIGK 253 Query: 313 --KILIYLDS------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + + + +V + L A+ YA R + + K +A Sbjct: 254 GHKIAFNILNIGRYKLGVGAVGSSKHVLEIALKYANGRQQFKTPISQFNLTKEKFGTMAS 313 Query: 365 DIAAATALSFRLANSFDEAKSR--SEEAAYARIMA----------PITKYWCCKMAPAVI 412 + AA + +R FDE S EE R +A + K++ ++ V+ Sbjct: 314 KLYAAESSVYRTVGLFDERMSHFTPEEEKDGRAVANAIAEYAIECSLNKFFASEVLDYVV 373 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEK 460 EA++ GG G+++E ++R YR+S N I G+ L V L LL+K Sbjct: 374 DEAVQIHGGYGFMDEYEVSRAYRDSRINRIFEGTNEINRLIVPGTYVKKAFSGELPLLQK 433 Query: 461 GTNLFEQLFSTLEQDLGSS 479 +L E+L + + +G + Sbjct: 434 AQSLQEELMMMMPEQVGDA 452 >gi|169794659|ref|YP_001712452.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE] gi|169147586|emb|CAM85447.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AYE] Length = 407 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 263 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 324 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397 >gi|149372377|ref|ZP_01891565.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49] gi|149354767|gb|EDM43330.1| acyl-CoA dehydrogenase [unidentified eubacterium SCB49] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 16/264 (6%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG 251 T IG L +TE GG+D+ + + K D Y ++G K F+++ + SD I+ A+ Sbjct: 117 TGEKIGCLCITEPFGGSDVGGMRTTAVKEGDH-YIINGSKTFITNGIYSDYLIVAAKTSP 175 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 +G + + D G+ +L +K+G R++ T E+ F N L+G+ N Sbjct: 176 ELGNKGISIFVLDRDMPGVSATKL-DKLGWRASDTGEIAFDNVKIPAANLMGEENQGFPY 234 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L L A+ + + +L I Y + R G + ++ +A +A ++ Sbjct: 235 IMQHFALERLIMAVNAHARSEWALEYTIAYMKERTAFGKSISKFQALRHKVAQLASEVEM 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 ++ A + +EA +++++ K++ V E ++ +GG GY+EE Sbjct: 295 CKTFNYVTAQRLGNGEYVVKEATMSKLLS-------TKVSDDVAYECVQLLGGYGYMEEY 347 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 +AR+ R+S I G G + +L Sbjct: 348 PLARNLRDSRLGPI--GGGTSEIL 369 >gi|260554052|ref|ZP_05826315.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260404791|gb|EEW98298.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 404 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257 L +TE GG+D+AA+ ++ + D Y +SG K F++S + +D + + + + + G Sbjct: 144 LAITEPSGGSDVAALQTKAVREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEG 202 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 203 ISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFN 261 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 262 MERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLE 321 Query: 375 RLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + K + E + + +A T +C A++ +GG G++ Sbjct: 322 ETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 374 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 375 ERIYREVKVNMIGGGAEEIM 394 >gi|300772347|ref|ZP_07082217.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300760650|gb|EFK57476.1| glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 450 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 32/275 (11%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLS 229 ++W PK MQK V GLTE G+ A +T+ QK G + L+ Sbjct: 176 KQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQG-WVLN 221 Query: 230 GHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 G K W +S SD I+ A+ +G V F+V + G +++K K+ R Sbjct: 222 GQKKWIGNSTFSDITIVWARDLDDGEVKGFIVRK-----ETPGFEVEKIKGKMALRIVQN 276 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHV 344 + +N L + + K+L + + M+V R + A+ Y R+R Sbjct: 277 GLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQ 336 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + +++ + ++ ++ A L FRL+ D + + E A+ A++ +C Sbjct: 337 FGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV-------FC 389 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++++A E +GG+G + E ++AR ++ A Sbjct: 390 SLRTRDIVSKAREVMGGNGILLEYNVARFLADAEA 424 >gi|123187384|gb|ABM69268.1| GcdH [Azoarcus sp. CIB] Length = 395 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T +G GLTE G+D ++ ++ +K+ DG Y LSG K W + Sbjct: 116 FGSEETKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMVTRARKV-DGGYSLSGAKMWITN 174 Query: 237 SPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ + G + F +LE G GL + K+G R++ T E+ F Sbjct: 175 SPIADVFVVWAKDDAGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347 + GP L+SA ++ + AEA + Y R G Sbjct: 230 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 283 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I RL DE + E + I K C Sbjct: 284 PLAANQLIQKKLADMLTEITLGLQGCLRLGRLKDEGNAPVE-------LTSIMKRNSCGK 336 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E IARH Sbjct: 337 SLDIARVARDMLGGNGISDEFCIARH 362 >gi|325268819|ref|ZP_08135444.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608] gi|324988791|gb|EGC20749.1| acyl-CoA dehydrogenase [Prevotella multiformis DSM 16608] Length = 577 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E + YA+ R G +I P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D K+ R E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GGSG+I E R YR++ SI G+ V+ + + GT L + LE + Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467 Query: 476 LGSSGKKVITILRDSIS 492 L K LRD ++ Sbjct: 468 LACDCMKA---LRDRVA 481 >gi|260206032|ref|ZP_05773523.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85] gi|289575421|ref|ZP_06455648.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85] gi|289539852|gb|EFD44430.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis K85] Length = 386 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|54023197|ref|YP_117439.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54014705|dbj|BAD56075.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 387 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 16/262 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE G+DIA++ + ++ +DG + +SG K F+S+ +D ++ A+ + G Sbjct: 124 GFALTEPDAGSDIASMRTVARRAADG-WHVSGAKTFISNAREADLVVLFAKTDPDAGFRG 182 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F VP+ G+P G+ Y ++K+G RS T + + L D + T Sbjct: 183 ITAFAVPK----GTP-GITYSEPQDKLGIRSAPTYTVYLDDVV--LPHDAVIGTEGRGGN 235 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L+ A + V+ M +A RR+ + P+ + + L A + Sbjct: 236 IALTALNRARIDVAAMANGIALRAWELGRRYAAERKQFGHPIAEFQAIQLLLGACDAELV 295 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R+ + D A + R A I+KY + A++ ++ GG+G++ E I R Sbjct: 296 AARV--TADWAADVKDAGQDLRRAASISKYTATEACFAIVDRVVQIHGGAGFMRESEIER 353 Query: 433 HYRESPANSILLGSGNAMVLDV 454 YR+ I G+ +L + Sbjct: 354 LYRDCRILRIFEGTSQIQLLTI 375 >gi|332873475|ref|ZP_08441426.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|332738300|gb|EGJ69176.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 407 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 12/257 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A + K + E + + K + A++ +GG G++ R Sbjct: 324 EETAWKMTQPKLQGPELV---VQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI 380 Query: 434 YRESPANSILLGSGNAM 450 YRE N I G+ M Sbjct: 381 YREVKVNMIGGGAEEIM 397 >gi|302344669|ref|YP_003809198.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301641282|gb|ADK86604.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 381 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 46/259 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR------ 252 +GLTE G+D+A + ++ + D + L+G K F+++ P++D ++ A+ E Sbjct: 125 MGLTEPDAGSDVAGMKTRATRQGD-EWVLNGSKIFITNGPIADVCLVYARTEAEGDRHAG 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLG 300 V F+V E G+P G + NK+G R++ T EL F + GFL+ Sbjct: 184 VSAFIV----EKGAP-GFTAGKPLNKLGVRTSHTSELFFEDCRVPASAMCGPEGAGFLM- 237 Query: 301 DLNVSTGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 M+ + + SA+++ + GM + + YA+ R G + +K Sbjct: 238 ----------SMQTVEWDRSALLAPFLGGMTNLIQRCVKYAKERQQFGRPIAQFQAIKHK 287 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ L + AA L +R+A D+ + + EAA A++ W K + + Sbjct: 288 LADMRLFVDAARGLVYRIAWCKDQGRPLNHLEAAVAKL---FIGDWSLK----PTNDGVM 340 Query: 418 CIGGSGYIEERSIARHYRE 436 GG G+ E + R +R+ Sbjct: 341 IHGGYGFCHEYDVERIFRD 359 >gi|241766504|ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241363274|gb|EER58824.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 388 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 43/304 (14%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+ TP V W P + + E + LTE G+D A++ ++ + Sbjct: 96 MLGTWATPAVRDHWGPLLTTGEKLAS-------------YCLTEPGAGSDAASLKTRAEL 142 Query: 221 ISDGIYCLSGHKWFLSSPMS-DAFIMLAQV----EGRVG--CFLVPRLLEDGSPNGLCYQ 273 + Y ++G K F+S S D +++A+ G G F+VP G+ Y Sbjct: 143 VGH-EYVINGSKAFISGAGSTDVLVLMARTGDASSGAAGISAFVVP-----ADAPGISYG 196 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMKILIYLDSAIMSVS 326 + + K+G S T + F N LLG ++ ++ +I I A SV Sbjct: 197 KKEQKMGWNSQPTRTISFDNVRIPADHLLGREGEGFKIAMKGLDGGRINI----ATCSVG 252 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + +L A Y + R G + ++ +AD+A ++ AA + RLA S +A +R Sbjct: 253 AAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELVAARQM-VRLAASKLDAGAR 311 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + K + V+ EA++ GG GYI E + R R++ + IL G+ Sbjct: 312 D-----ASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREYPLERLLRDARVHQILEGT 366 Query: 447 GNAM 450 M Sbjct: 367 NEIM 370 >gi|167924100|ref|ZP_02511191.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215] Length = 390 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV-GCFL 257 L +TE GG+D+AA+ + + D Y ++G K F++S M +D + + + + G Sbjct: 130 LAITEPGGGSDVAALRTSAMRDGDH-YVVNGEKVFITSGMRADHYTVAVRTDAHAQGAKG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL DG GL LK K+G ++ T L F + L+G + Sbjct: 189 LSLLLVDGDTPGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANLIGPEGGGFALIMQNFN 247 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A ++ +V +A+ +AR+R G + D V++ + D+A I A A Sbjct: 248 LERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLE 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A D R+ E M K + + A++ +GG GY+ R Y Sbjct: 308 QCAWQIDHVDRRAPELVATICM---LKNFATQTMQFCADAAVQILGGMGYMRGTRPERIY 364 Query: 435 RESPANSILLGSGNAM 450 RE N I G+ M Sbjct: 365 REVKVNMIGGGAEEIM 380 >gi|183220651|ref|YP_001838647.1| acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910753|ref|YP_001962308.1| acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775429|gb|ABZ93730.1| Acyl-CoA dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779073|gb|ABZ97371.1| Acyl-CoA dehydrogenase family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 585 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 121/288 (42%), Gaps = 57/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP--MSDA---FIMLAQV----E 250 + LTE G+D+ + ++ K DG++ ++G K F++ DA + LA+ Sbjct: 185 MALTEPNYGSDLPNLQTKAVKGEDGVWRITGTKRFITHACGFGDAPSIILTLARTGSTTS 244 Query: 251 GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G G FLV + ++ K+G + T E+ F N G L+G Sbjct: 245 GARGLSFFLV-------HSKDVFVASIEKKMGLHCSPTCEVVFENAPGILIG-------- 289 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA----------EAIHYARRRHVSGGILIDQPVMKRA 358 E+ K L+ A+M+ + + ++ E YA R G + + +K+ Sbjct: 290 -EEGKGLVKYSMAMMNQARLNIAAQAMGIATAAYFEGKKYAEERVQFGKTISNITAVKKM 348 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAY--------------------ARIMAP 398 + + ++AA + + + + D+ + + E A + P Sbjct: 349 LERMEREVAAMRCILYEASFAVDQYRWKEERGKMKGLTEKDIKKDETFKKWEKLASLFTP 408 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++KY+ +MA V +A++ GGSGY E+ +AR YR+ +I G+ Sbjct: 409 LSKYYITEMANVVAYDALQIHGGSGYTEDYDVARLYRDVRITNIYEGT 456 >gi|218779317|ref|YP_002430635.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760701|gb|ACL03167.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 605 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 52/336 (15%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A M+ L T + P + + ++ T + LTE G+D+ A+ + Sbjct: 133 TARMIHLYGTQEQKDKYIPNLVAGKWGGT-------------MLLTEACAGSDVGALETT 179 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR------VGCFLVPRLL--ED 264 + DG + L+G+K F+++ D +LA++EG + F+VP+ ED Sbjct: 180 AVRNPDGTFSLTGNKIFITNGEHDLVENIIHPVLARIEGDPPGTSGISIFIVPKYFVNED 239 Query: 265 GS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYL 318 GS N + ++ K+G +AT + GFLLG+ + +M + Sbjct: 240 GSLGDRNDIVCTGVEEKLGIHGSATCSMSLGTKGKCTGFLLGEERKGMNIMFNMINGSRM 299 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGIL-------------IDQPVMKRAIADIALD 365 + + +S + A++YAR R V G L I+ P ++R + + Sbjct: 300 GTGLQGLSYASAAYLLAVNYARER-VQGRSLADFKDKSAPSVPIIEHPDVRRNLLWMKSY 358 Query: 366 IAAATALSFRL---ANSFDEAKSRSEEAAYA---RIMAPITKYWCCKMAPAVIAEAMECI 419 + + L + + A ++ E Y+ ++ P K + V +A++ Sbjct: 359 VDGMRSFFHYLVSCSTRMETAATQEEREIYSDLFEMLTPSIKDYLAVKGHEVCVQAIQVF 418 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG+GY + + ++ R+ SI G+ +D+L Sbjct: 419 GGAGYTRDYLVEQYARDCKITSIFEGTSGIQAMDLL 454 >gi|115526303|ref|YP_783214.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520250|gb|ABJ08234.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53] Length = 390 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G+K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPVAETLVVYAKTDPAAGARGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVED 311 + + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFIVEKGMKGFSTAQKLDKLGMRGSDTGELVFVDCEVPEENVLGQVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ A + M+ L + Y R G + +++ IAD+ + + A+ A Sbjct: 250 ERVVL----AAGPLGIMQACLDVVMPYVHERKQFGEPIGSFQLVQGKIADMYVTMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A C +A++ +GG+GYI + Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYASEKATQCA-------LDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|327441635|dbj|BAK18000.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 396 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+AA++S ++ D Y L+G K W ++D F++ A Sbjct: 113 PQAKGEKIGAFGLTEPGAGSDVAAMSSFAKRNGDH-YILNGQKTWISLCDIADHFLVFAY 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + + G + +K K G R+ T EL F + + N+ Sbjct: 172 TDKEKAHHGISAFIVEREWAGFSSKAIKGKYGIRAGNTGELFFEDV---RVPAENLLGEE 228 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD+ +V+ V L +A + Y + R G + + ++ + +A + Sbjct: 229 GEGFKIAMSALDNGRFTVAAGAVGLIQACIEASVKYCKERETFGKPIGEHQLVGQMLAKM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + L +R ++ + E + A K+ C A +A++ G Sbjct: 289 EAGYEMSRLLVYRAGELKNKGVRNTRETSLA-------KWQACDFANKAADDAVQIHGAY 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY +E +AR+ R S A I G+ Sbjct: 342 GYSDEYPVARYLRNSKAPVIYEGT 365 >gi|325853068|ref|ZP_08171217.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|325484442|gb|EGC87363.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella denticola CRIS 18C-A] Length = 577 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 28/317 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G N G ++ + L Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--NTRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + E + YA+ R G +I P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEGLAYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D K+ R E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDLYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQD 475 + GGSG+I E R YR++ SI G+ V+ + + GT L + LE + Sbjct: 409 ISIHGGSGFIMEYKSQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL-SIMKEMLEDE 467 Query: 476 LGSSGKKVITILRDSIS 492 L K LRD ++ Sbjct: 468 LACDCMKA---LRDRVA 481 >gi|321471154|gb|EFX82127.1| hypothetical protein DAPPUDRAFT_49331 [Daphnia pulex] Length = 391 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 31/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252 +TE G+D+A+I ++ +K D Y L+G K W + ++ + +LA+ Sbjct: 127 VTEPGAGSDVASIQTKAEKKGDD-YVLNGQKMWITNGGHANWYFVLARTNPDPKAPPHQS 185 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+V R +P GL R + +G R++ T + F + L+ NV G Sbjct: 186 LTGFIVDRH----TP-GLTPGRKEINLGQRASDTRGITFEDV---LVPKENVLIGEGAGF 237 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + D +V+ V LA EA YA RR+ G ++ ++ +A++A++I Sbjct: 238 KIAMGAFDRTRPTVASGAVGLAQRALDEATQYATRRYTFGVPIVKHQLIMGMLAEMAMNI 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + R A D+ + + A+ A+ MA C +A++ GG+GY Sbjct: 298 ELSRLAWMRAAWETDQRRRNTYYASIAKAMAADVANKCA-------TDALQIFGGNGYNT 350 Query: 427 ERSIARHYRESPANSILLGS 446 E I + R++ I G+ Sbjct: 351 EYPIEKLMRDAKIYQIFEGT 370 >gi|284039956|ref|YP_003389886.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] gi|283819249|gb|ADB41087.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] Length = 599 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 46/289 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257 LTE G+D + ++ + DG Y L+G K W + +D +I+ A+++ + F+ Sbjct: 152 LTEPDSGSDANSGKTKAKLTEDGKHYILNGQKMWITNGGFADVYIVFAKIDEDKNLSAFI 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V R E G+ ++K+G + + T ++ F+ N F + LN Sbjct: 212 VERGYE-----GITMNEPEHKMGIKGSDTRQIFFNDCKVPVENLLSARENGFKIAVNILN 266 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + + I +V G + + AI Y+ R + +K +A++A Sbjct: 267 IGR-----------IKLGIAAVGGSKEVINHAIRYSNERKQFKTAISQFGAIKHKLAEMA 315 Query: 364 LDIAAATALSFRLANSFDEA----KSRSEEAAYARIMA--------PITKYWCCKMAPAV 411 L + A+ S+R + D+ K + + A A++ A I K ++ V Sbjct: 316 LKVYASETASYRAGQNIDDLIEDLKGQGMDDASAKLKALEQFSIECAIMKVHGSEVLDYV 375 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + E ++ GG GY + + R YR++ N I G+ + V+++L K Sbjct: 376 VDEGVQVYGGMGYSADAPMDRAYRDARINRIFEGTNEINRMLVVDMLLK 424 >gi|195441202|ref|XP_002068406.1| GK20439 [Drosophila willistoni] gi|194164491|gb|EDW79392.1| GK20439 [Drosophila willistoni] Length = 417 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 157 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 214 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T L F N TFG + G Sbjct: 215 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMLTFDNVRVPEENILGTFGH---GYKYAAG 271 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + + V LA+ I Y R G + + M+ IA I Sbjct: 272 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGEAIYNFQSMQHQIATI 322 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA L++ A ++ +EAA A K++ ++A + ++ +GG Sbjct: 323 ATEIEAARLLTYNAARLQEQGAPFLKEAAMA-------KFYASEVAQRAAIKCIDWMGGV 375 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR++ +I G+ N + + ++K Sbjct: 376 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 413 >gi|322807513|emb|CBZ05088.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065] Length = 379 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + + + +G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKEMSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + ++ + +AE AI Y + R G L ++ IAD+ + + AA Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++ + +AA A++ + + A V ++++ +GG GY ++ Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEAAMYVTNKSLQILGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 LERMLRDARITEIYEGT 365 >gi|146299050|ref|YP_001193641.1| acyl-CoA dehydrogenase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146153468|gb|ABQ04322.1| acyl-CoA dehydrogenase domain protein [Flavobacterium johnsoniae UW101] Length = 393 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 32/256 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ + + + D Y L+G K W ++P +D ++ A Sbjct: 125 PKLATGEYIGCFGLTEPDHGSDPGSMITNFKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL 302 + EGR+ +V R +E G NK R++AT EL F N FL Sbjct: 184 KNEEGRIHGLIVERGME-----GFTTPETHNKWSLRASATGELIFDNVKVPKENFLPNKS 238 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKR 357 + L LDSA ++ + A A+ YA+ R G + + ++ Sbjct: 239 GLGA-------PLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIGGTQLQQK 291 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A++ +I A L++RL +E K+ + + + A K MA + EA + Sbjct: 292 KLAEMITEITKAQLLTWRLGVLRNEGKATTAQISMA-------KRNNVNMAIEIAREARQ 344 Query: 418 CIGGSGYIEERSIARH 433 +GG G E SI RH Sbjct: 345 MLGGMGITGEYSIMRH 360 >gi|153938784|ref|YP_001392550.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland] gi|152934680|gb|ABS40178.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. Langeland] gi|295320536|gb|ADG00914.1| butyryl-CoA dehydrogenase [Clostridium botulinum F str. 230613] Length = 379 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + + + +G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKEMSGFSIGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + ++ + +AE A+ Y + R G L ++ IAD+ + + AA Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAVAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++ + +AA A++ + ++A V ++++ +GG GY ++ Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEVAMYVTNKSLQILGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 LERMLRDARITEIYEGT 365 >gi|93005689|ref|YP_580126.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] gi|92393367|gb|ABE74642.1| acyl-CoA dehydrogenase-like [Psychrobacter cryohalolentis K5] Length = 601 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 46/296 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIMLA--------Q 248 + LTE G+ +A I + K DG Y + G K ++S+ +SD + L Sbjct: 163 MALTEPHAGSSLADIKTTAVKQDDGSYRVKGSKIYISAGDHELSDNIVHLVLAKVPGGPG 222 Query: 249 VEGRVGCFLVP--RLLED---GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + F VP RL +D G N + L +K+G R + L F + +G+L+G Sbjct: 223 GVKGISLFAVPKYRLNDDLSVGEHNDVHLTGLIHKLGYRGATSTALSFGDAGECYGYLIG 282 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + L + + +I + +A++ G + SL YA+ R G I + Sbjct: 283 EEHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSL----DYAKDR-TQGRIAPNNKPED 337 Query: 357 RAIA-----DIALDIAAATALS-------------FRLANSFDEAKSRSEEAAYARIMAP 398 A A D+ + A A S N+ ++A ++E + ++ P Sbjct: 338 AATAIIQHGDVKRMLLAQKAYSEGGISLCLYGSNLIDRINTCEDATLKAELSELLDLLTP 397 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + K W + P ++ +GG+GY E + +R++ N I G+ LD+ Sbjct: 398 VLKAWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGVQALDL 453 >gi|15609861|ref|NP_217240.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium tuberculosis H37Rv] gi|148662565|ref|YP_001284088.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra] gi|148823912|ref|YP_001288666.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11] gi|167970053|ref|ZP_02552330.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis H37Ra] gi|218754459|ref|ZP_03533255.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503] gi|219558732|ref|ZP_03537808.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17] gi|253798195|ref|YP_003031196.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435] gi|254551779|ref|ZP_05142226.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260201848|ref|ZP_05769339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46] gi|289444266|ref|ZP_06434010.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46] gi|289553492|ref|ZP_06442702.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605] gi|289570900|ref|ZP_06451127.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17] gi|289762895|ref|ZP_06522273.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503] gi|297635331|ref|ZP_06953111.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207] gi|297732327|ref|ZP_06961445.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN R506] gi|306777002|ref|ZP_07415339.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001] gi|306780905|ref|ZP_07419242.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002] gi|306785530|ref|ZP_07423852.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003] gi|306790126|ref|ZP_07428448.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004] gi|306794210|ref|ZP_07432512.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005] gi|306798628|ref|ZP_07436930.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006] gi|306807476|ref|ZP_07444144.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007] gi|306968782|ref|ZP_07481443.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009] gi|306973117|ref|ZP_07485778.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010] gi|307080826|ref|ZP_07489996.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011] gi|307085418|ref|ZP_07494531.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012] gi|313659660|ref|ZP_07816540.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN V2475] gi|2292958|emb|CAB10900.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium tuberculosis H37Rv] gi|148506717|gb|ABQ74526.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium tuberculosis H37Ra] gi|148722439|gb|ABR07064.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis F11] gi|253319698|gb|ACT24301.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 1435] gi|289417185|gb|EFD14425.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T46] gi|289438124|gb|EFD20617.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 605] gi|289544654|gb|EFD48302.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T17] gi|289710401|gb|EFD74417.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis GM 1503] gi|308214659|gb|EFO74058.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu001] gi|308326305|gb|EFP15156.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu002] gi|308329834|gb|EFP18685.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu003] gi|308333477|gb|EFP22328.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu004] gi|308337472|gb|EFP26323.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu005] gi|308341144|gb|EFP29995.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu006] gi|308346071|gb|EFP34922.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu007] gi|308353669|gb|EFP42520.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu009] gi|308357516|gb|EFP46367.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu010] gi|308361469|gb|EFP50320.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu011] gi|308365064|gb|EFP53915.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis SUMu012] gi|328457968|gb|AEB03391.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis KZN 4207] Length = 386 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|303237822|ref|ZP_07324379.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella disiens FB035-09AN] gi|302481968|gb|EFL45006.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella disiens FB035-09AN] Length = 574 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 72/325 (22%), Positives = 145/325 (44%), Gaps = 33/325 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTHDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + +++K+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCGDTKM--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V +A E ++YA+ R G +I P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGVASEAYKEGLNYAKERAQFGKKIITFPAVYDMLSRMKAKLDAGR 346 Query: 371 ALSFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ A D A+ R E Y R+ P+ K + A Sbjct: 347 SLLYQTARYVDIYKALEDIARDQKLTAEERQEMKKYKRLADAFTPLAKGINSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT--NLFEQLFST 471 +++ GGSG+I E R YR++ SI G+ V+ + + GT N+ +++ Sbjct: 407 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYIINGTYLNIMKEM--- 463 Query: 472 LEQDLGSSGKKVITILRDSISLCKE 496 LE+++ K + T + I+L +E Sbjct: 464 LEENVCDCMKDLKTRVERMIALYEE 488 >gi|258512363|ref|YP_003185797.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479089|gb|ACV59408.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 388 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 26/259 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQ 248 P + + LTE G+ A I + ++ D Y L+G KW + S ++D F++ + Sbjct: 108 PFVAGDIRVTFTLTEPNSGSG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLFCR 165 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 +EG G LVPR GL + + +G A L + + L Sbjct: 166 LEGTSGGEGTLALLVPR-----DAPGLTVELMAPAMGIAGTAHGHLRLRDCRVPVANRLG 220 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI---- 359 G ++ +LD + ++ V AE H + QP+ KR I Sbjct: 221 -EEGDGLEVAFRGFLDPSRTAIGMTCVGAAERALELAADHALRRVTFGQPLAKRQIIQMW 279 Query: 360 -ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 A++A DI AA L A FDE + EAA A++ A +M V +A++ Sbjct: 280 LAEMATDIEAARQLVLHAARRFDEGHPITVEAAMAKMFA-------TEMLQRVTDKALQI 332 Query: 419 IGGSGYIEERSIARHYRES 437 GG GY + I R YR++ Sbjct: 333 HGGPGYFKSSEIERIYRDA 351 >gi|121704720|ref|XP_001270623.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] gi|119398769|gb|EAW09197.1| glutaryl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] Length = 431 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 29/248 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ + ++ G Y LSG K W +SP+SD ++ A++E G++ Sbjct: 167 FGLTEPNHGSDPGSMETVAREHPTKKGYYLLSGSKTWITNSPISDIMLVWAKLESTGKIK 226 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R P L +KNK R++ T ++ + +L ++ GP Sbjct: 227 GFIVER--SRCPPGTLQTPAIKNKTALRASITGMIQMDDCPVPAENMLPEVEGLKGP--- 281 Query: 312 MKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALD 365 L+SA + ++ G +L + + AR R+ G L ++++ +AD A D Sbjct: 282 ---FTCLNSARLGIAFGAMGALEDCLDRARTYALERKQFKGNPLAKYQLIQKKLADAATD 338 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A T + ++A D KS E M + K C A A E GG+ Sbjct: 339 AAYGTLAATQVARLKDAGKSTPE-------MISMIKRQNCDRALANARVLQEVFGGNATS 391 Query: 426 EERSIARH 433 +E I RH Sbjct: 392 DEYHIGRH 399 >gi|85859865|ref|YP_462067.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB] gi|85722956|gb|ABC77899.1| acyl-CoA dehydrogenase, short-chain specific [Syntrophus aciditrophicus SB] Length = 383 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 34/291 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T K + K+ S EY G G+TE G+D+ ++ S + D Y Sbjct: 104 TEEAKKKYVQKLVSAEY-------------LGGFGITEFNAGSDVMSMKSTAEDKGD-YY 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++ +D I A + G L +E + G+ L +K+G++S+ Sbjct: 150 LLNGSKTWISNANCADVIIYYAYTDKAAKGKGLSAFAVELKNNPGIRTTDL-DKMGSKSS 208 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 T E+ N + N+ P + KI+ L+ +S + + LA+A I Y Sbjct: 209 PTGEIYLDNV---KVPKENLLGKPGDGAKIVFGSLNGTRLSAAAGGIGLAQACLDAAIKY 265 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMA 397 A R G + + I ++A ++ AA + +R A D+ + E A A+ +A Sbjct: 266 ANEREQFGKPIGTFQANQFLIGEMATELEAARLMVYRAAWQKDQGNLGNTVETAQAKYLA 325 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 Y C AM G GY E + R+YR++P +++ GS N Sbjct: 326 GEVAYKCA-------IGAMRIFGAYGYSTEYPVNRYYRDAPTYAMVEGSTN 369 >gi|163732157|ref|ZP_02139603.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149] gi|161394455|gb|EDQ18778.1| acyl-CoA dehydrogenase [Roseobacter litoralis Och 149] Length = 382 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%) Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 MA G +S M+ + + W PK+ + E L Sbjct: 78 MACPSVGSFLSIHNMCGGMIDTYGSDAMKTHWLPKLCAME-------------TVFSYCL 124 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRL 261 TE G+D AA+ ++ ++ + G Y L+G K F+S SDA++ + + G G + + Sbjct: 125 TEPGSGSDAAALRTRAERSNAG-YVLNGTKAFISGGGYSDAYLTMVRT-GDAGPKGISAM 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTG 307 L + GL + L+NK+G R+ T +++F + F + + L+ Sbjct: 183 LIENGRAGLSFGALENKMGWRAQPTAQVQFDDCAIPADNLVGEEGQGFAYAMAGLDGGR- 241 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A ++ G + +L A+ Y R G L ++ +AD+ + + Sbjct: 242 ----------LNIAASALGGAQAALNAALSYTAERKAFGQRLDQFQALQFKLADMEVKLQ 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + A+ D S + + + K + +A V +A++ GG GY+ + Sbjct: 292 TARIFLRQAASKLDNKTSDATK------YCAMAKLYVTDVAFDVANDALQLHGGYGYLAD 345 Query: 428 RSIARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 346 YGIEKIVRDLRVHQILEGTNEVM 368 >gi|260187740|ref|ZP_05765214.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A] gi|289448379|ref|ZP_06438123.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A] gi|289421337|gb|EFD18538.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CPHL_A] Length = 386 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|239813343|ref|YP_002942253.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239799920|gb|ACS16987.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 35/325 (10%) Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 Y MA EA GH+ V A V M TP + + + RE+ AP Sbjct: 67 YAMAMAEALGHVSCGGVPMAIGVQTDMCTPALAR-FGSDELRREF----LAPAIAGETVG 121 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGRV-- 253 +G++E G+D+A + S +K DG Y +SG K W +S +D ML +G V Sbjct: 122 CIGVSEPGAGSDVAGLKSHARK--DGADYLISGQKMWITNSLQADWMCMLVNTSDGPVHR 179 Query: 254 --GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 +VP SP G+ + KIG S+ T + F N + +G+ G Sbjct: 180 NKSLVMVPM----DSP-GIEKAKKIRKIGMHSSDTGLIHFDNVRVPQRYRIGE--EGQGF 232 Query: 309 VEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 V M+ L +A S+ M +A+ I +A++R + G L DQ ++ +A++ ++ Sbjct: 233 VYQMQQFQEERLWAAASSLEPMEDCIAQTIEWAQQRQMFGATLADQQWVQFKLAELKTEV 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A AL++R + + + E A+ A++ ++ V ++ GG G+ Sbjct: 293 EALRALAYRACDLHVQGQDVLELASMAKLKT-------GRLTRQVADTCLQFWGGMGFTL 345 Query: 427 ERSIARHYRESPANSILLGSGNAMV 451 E ++R YR+ SI G+ M+ Sbjct: 346 ENRVSRLYRDGRLGSIGGGADEVML 370 >gi|170755246|ref|YP_001782838.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra] gi|169120458|gb|ACA44294.1| butyryl-CoA dehydrogenase [Clostridium botulinum B1 str. Okra] Length = 379 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F+++ +D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--QQSVAVLEGDHYILNGSKIFITNGGAADTFVIFAMTDRSKGVKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + + + +G + ++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFILEKEMSGFSVGKTEDKMGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + ++ + +AE AI Y + R G L ++ IAD+ + + AA Sbjct: 239 ---LDGGRIGIAAQALGIAEGALDHAIAYMKERKQFGKNLTKFQGLQWYIADMKVRVDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A ++ + +AA A++ + + A V ++++ +GG GY ++ Sbjct: 296 KYLVYKAAWKKSAGENYTMDAAEAKL-------YAAEAAMYVTNKSLQILGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 LERMLRDARITEIYEGT 365 >gi|145521412|ref|XP_001446561.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414039|emb|CAK79164.1| unnamed protein product [Paramecium tetraurelia] Length = 397 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 31/268 (11%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K + PK+ S E+ IG L ++E G+D+ ++ + +K+ D Y L+G Sbjct: 126 KKYLPKLCSGEW--------------IGALAMSEPNAGSDVVSMKTTAKKVGDK-YILNG 170 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + P++D ++ A+ E + + + G + +KIG +S+ T + Sbjct: 171 SKMWITNGPVADVIVVYAKTEPEKKQHGITAFIVEAGMKGFSRGKKLDKIGMKSSDTGPI 230 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344 F N +LG++N G M L Y L A V M+ + + Y R Sbjct: 231 YFDNVEVPAENVLGEVN--KGVYVLMSGLDYERLVLAAGPVGLMQAAFDISREYCNTRQQ 288 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + +M+ +A++ + A+ A+ + ++ + D + + A A I Y+ Sbjct: 289 FGKPIGQFQLMQGKLAEMYTTLQASRAMLYSVSRAVDAGNITNTDCA-ALI------YYT 341 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIAR 432 A V EA++C+GG+GY +E + R Sbjct: 342 SVNATQVGLEAIQCLGGNGYTQEYPVGR 369 >gi|110833845|ref|YP_692704.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110646956|emb|CAL16432.1| glutaryl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 388 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 28/274 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D +++++ +K+ DG Y L+G K W +SP++D ++ A ++G++ F+V Sbjct: 134 FGLTEPDHGSDPGSMSTRAKKV-DGGYLLNGSKTWITNSPIADVAVVWANLDGKINGFVV 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316 R + G +++ K R++ T ++ + F L+V GP Sbjct: 193 ERGFD-----GFSAPKIEGKFSLRASITGQIMLDDCFVPEQNRLDVEGLKGPFS------ 241 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A +S + AE A Y R G L ++++ +AD+ +I Sbjct: 242 CLNKARYGISWGAMGAAEFCWQAARQYTLDRKQFGRPLAATQLIQKKLADMQTEITLGLQ 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +L D +A M + K C A + +A + GG+G +E + Sbjct: 302 GALQLGRLIDAGN-------WAPEMVSLMKRNNCGKAIDIARQARDMHGGNGISDEYHVI 354 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 RH A + G+ + L +L + G F Sbjct: 355 RHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 387 >gi|332141327|ref|YP_004427065.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551349|gb|AEA98067.1| Acyl-CoA dehydrogenase family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 384 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ K +G Y L+G K F+S S +++ G G V Sbjct: 124 LTEPGAGSDAASLKTKATK-ENGGYVLNGAKVFISGAGSTDILVVMARTGEDGPKGVSAF 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKI 314 + +G+ Y + + K+G + T + F N +LLG+ ++ ++ +I Sbjct: 183 AVPANTDGIEYGKAEEKMGWNAQPTRMITFDNVKLDESWLLGEEGQGFKMAMQGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A SV + +L A Y R G + ++ +AD+A ++ AA + Sbjct: 243 NI----ATCSVGTAQQALNVARDYMNEREQFGKPIAGFQALQFKLADMATELVAARQMVR 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D + +++ Y + K + + V +A++ GG GYI+E + RH+ Sbjct: 299 MAACKLD--NNDADKTTYC----AMAKRFATDVGFNVCNDALQLHGGYGYIKEYPLERHF 352 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 RDVRVHQILEGTNEIM 368 >gi|24213114|ref|NP_710595.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|24193817|gb|AAN47613.1| isovaleryl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 394 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 43/281 (15%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG---RVG 254 G+G+TE GTD+ + + K D Y L+G K ++++ + F++ A++ R Sbjct: 132 GMGMTEPGAGTDVLGMRTIAVKKGDK-YVLNGSKQYITNGNVGSVFLVYAKMNKDSKRTT 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F+V + S G + + K+G RS+ T +L F D V P E++ Sbjct: 191 SFIV-----ESSFPGFSVGKKEEKMGMRSSPTTQLIFE--------DCEV---PAENLVG 234 Query: 313 -------KILIYLDSAIMSVSGMRVSLAE------AIHYARRRHVSGGILIDQPVMKRAI 359 ++ L+ ++++ + +A+ A + R R G L + ++R + Sbjct: 235 QEDGALVHMMRNLEIERITLAAQSLGIAKRCVDVMADYTIRHREAFGKKLSEFGQIQRLL 294 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A+ D AA AL +++A+ S AA A+++A +MA V A++ + Sbjct: 295 AESYADYQAARALVYQVASGIHPESRNSLGAASAKLVA-------TQMAERVSRNAIQAL 347 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG GY E + R +R+S SI G+ AM +++ L+K Sbjct: 348 GGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKK 388 >gi|85712000|ref|ZP_01043054.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145] gi|85694186|gb|EAQ32130.1| Acyl-CoA dehydrogenase [Idiomarina baltica OS145] Length = 389 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D F++ A+ + + Sbjct: 130 LAMSEPNAGSDVVSMKLKAEKKGD-KYVLNGNKMWITNGPDADVFVIYAKTDAEKASRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + + G + +K+G R + T EL F + +LG+LN G VE + Sbjct: 189 TAFIVEKNTPGFSQAQKLDKLGMRGSNTCELVFEDAEVPAENILGELN---GGVEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M+ L + Y R+ G + + +++ +AD+ AA A Sbjct: 246 LDYERAVLAAGPLGIMQACLDAVVPYIHDRNQFGKAIGEFQLVQGKVADMYTRTNAARAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 306 VYAVAQSCDRGETTRKDAAGAIL-------YAAELATQLALDAIQLLGGNGYINEYPTGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|121605595|ref|YP_982924.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594564|gb|ABM38003.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 42/283 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFLVP 259 +TE G+D A I + +K G + L+G K F+S SD F++ A+ E + F+V Sbjct: 125 ITESGAGSDAAGIKTHAKKTDTG-WVLNGSKHFISDGEWSDFFLVSAKTGEKEISMFMVD 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVS 305 + G P G + + +G R +EL F N F +G LNV Sbjct: 184 K----GLP-GFTVGKDQKMMGLRGTPHLELFFDNVPLEAVTLLGEEGQGFKLAMGALNV- 237 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + L G + E + YA R G + D ++++ +AD + Sbjct: 238 ----------VRLAQVGARAVGKASHVCELMVDYANERKQFGQRIGDFQMVQQQLADSVI 287 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA + + A D+ E+ A ++ A T V+ A++ GG G+ Sbjct: 288 EINAARWMVYHAAWMLDQGMDAREQIAMVKVQAAET-------LGRVVDRAVQIFGGMGF 340 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNL-LEKGTNLFE 466 +E I R+YR++ I G+ + + ++KG LF+ Sbjct: 341 CKELPIERYYRDARIYRIFDGTSEIHRSVIAKMVMKKGAALFD 383 >gi|94984536|ref|YP_603900.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] gi|94554817|gb|ABF44731.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 17/245 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256 G +TE G+D A I ++ +K D +Y L+G K ++S +P++ ++A + G Sbjct: 122 GFAITEPSSGSDAANIRTKAEKRGD-VYVLNGTKHYISNAPIAGLLTVIAITDPSQGTRG 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + L+E S G+ ++ K+G + + E+ F + LLG N+ G E + Sbjct: 181 MSAFLVEPQSTPGVSIGKIDEKMGQKGALSSEVIFQDAEIPAANLLGPENL--GYREALG 238 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 IL + A S M+ L ++ +A+ R G + ++ +A++ + I + Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAKTREQFGQPIAQFQAVQFMLAEMEVAIQTSRL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++A D+ + R MA + KY +M V +A++ GG GY+++ + Sbjct: 299 LWQKVAWMVDQGQD-------VRRMASVAKYHATEMLSQVADKAVQVAGGMGYMKDSPVE 351 Query: 432 RHYRE 436 R YR+ Sbjct: 352 RFYRD 356 >gi|307293077|ref|ZP_07572923.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306881143|gb|EFN12359.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 384 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 33/279 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T ++W PK + E ++A GLTE G+D A++ + K D Y Sbjct: 100 TEEQKREWLPKFATGE------------AIA-SFGLTEPEAGSDAASLRTVAIKDGDN-Y 145 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K +++ +P + F ++A+ E V G + + + G+ + + K+G + + Sbjct: 146 RITGTKRYITNAPRASVFTLMARTEPDVKGAAGISAFILPANTPGISFGKPDKKMGQKGS 205 Query: 285 ATVELEFSNTFGFLLGDLNVSTG-PVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIH 337 T ++ + ++ N+ G P K + LD + ++ + + + + ++ Sbjct: 206 LTTDVILDDV---VVPAKNIIGGVPGRGFKTAMKVLDRGRIHIAAVSLGMCQRLIDMSLQ 262 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G + D +++ +AD+ +D+ A AL +A FD + S E A Sbjct: 263 YALERKQFGQRIADFQLIQGMLADMKVDMLTAEALMQSVAAKFDAGEPVSLECA------ 316 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 KY+ + + A++ GG+GY+ E + R YR+ Sbjct: 317 -ALKYYASEAVGRIADRAVQIHGGAGYMAEYKVERFYRD 354 >gi|84501724|ref|ZP_00999896.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, centralregion:Acyl-CoA dehydrogenase, N-terminal [Oceanicola batsensis HTCC2597] gi|84390345|gb|EAQ02904.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, centralregion:Acyl-CoA dehydrogenase, N-terminal [Oceanicola batsensis HTCC2597] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 20/260 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV---EGRV 253 + + +TE G+D+AAI ++ + D Y L+G K ++S+ + D F++ A+ GR+ Sbjct: 124 MAIAMTEPDTGSDLAAIRTRAEDRGDH-YLLNGSKTYISNGVIGDLFVVAARTGEKRGRI 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 G F+V +E G R K+G T E+ F + LLGD + + Sbjct: 183 GLFVVMAGME-----GFSLGRHLKKMGLPVQDTAEIRFDDVRVPKENLLGDPGMGFAYMA 237 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + + SAI S+S + + + + + R G + + +AD+ + AA Sbjct: 238 ECLAVERTMSAISSLSHAQAAFDITLEFVKERRAFGKPVGAFQNTRFVMADLRARLDAAQ 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + ++ + E+AA A+++ C ++ V+ ++ GG+GY++E I Sbjct: 298 AYLDQCVVLANDERLTPEDAAAAKLL-------CSEVQGDVVDAGLQLHGGAGYMDEYEI 350 Query: 431 ARHYRESPANSILLGSGNAM 450 + +R++ I G+ M Sbjct: 351 SHMFRDARIARIYAGTSEIM 370 >gi|227485266|ref|ZP_03915582.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172] gi|227236726|gb|EEI86741.1| butyryl-CoA dehydrogenase [Anaerococcus lactolyticus ATCC 51172] Length = 378 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 40/273 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQK---ISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 LTE GTD + GQK + DG Y L+G K F+++ +D +++ A + G Sbjct: 122 FALTEPDAGTD-----ASGQKTVAVKDGDEYVLNGSKIFITNAGHADTYVVFAMTDKSQG 176 Query: 255 CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 + ++E G+P G + ++K+G ++++T+EL F + LLG E Sbjct: 177 TKGISAFIVEKGTP-GFNFGAKEDKMGIKASSTMELVFQDCRIPAANLLG---------E 226 Query: 311 DMKILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + K Y LD + ++ + +AE AI Y + R G + + +A+ Sbjct: 227 EGKGFKYAMQTLDGGRIGIAAQALGIAEGALNKAIKYVKERQQFGRPIAKFQNTQFKLAE 286 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A+DI +A L ++ A D +S + + A K ++A V +A++ GG Sbjct: 287 MAIDIESARHLVYKAATLKDAGESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGG 339 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GY +E + R R++ I G+ M++ V Sbjct: 340 YGYSKEYEVERMMRDAKITEIYEGTSEVMLMVV 372 >gi|224056002|ref|XP_002197059.1| PREDICTED: acyl-Coenzyme A dehydrogenase, long chain [Taeniopygia guttata] Length = 431 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 40/270 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC 255 + +TE G+D+ + + +K DG + L+G K F+++ MSD I++A E R Sbjct: 171 IAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKVFITNGWMSDVVIVVAVTNREARSPA 228 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGD 301 + L + G R KIG ++ T EL F + F +L+ + Sbjct: 229 HGISLFLVENGTKGFIKGRKLQKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAE 288 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L P E + I A M+++ E +Y R+R G + ++ +A+ Sbjct: 289 L-----PQERLLI------ADMALASCEFMFEETRNYVRQRKAFGKTIAHLQTVQHKLAE 337 Query: 362 IALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 I I A + N A R + A A + KYWC + +V + ++ G Sbjct: 338 IKTQICVGRAF---MDNCLQLHADKRLDSAT-----ASMAKYWCSDLQNSVATQCVQMHG 389 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY+ E IA+ + ++ I G+ M Sbjct: 390 GWGYMWEYPIAKAFVDARVQPIYGGTNEIM 419 >gi|121638599|ref|YP_978823.1| putative acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991091|ref|YP_002645780.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|121494247|emb|CAL72725.1| Probable acyl-CoA dehydrogenase fadE20 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774206|dbj|BAH27012.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|239831903|ref|ZP_04680232.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG 3301] gi|239824170|gb|EEQ95738.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum intermedium LMG 3301] Length = 394 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + + LL +++ GP Sbjct: 194 GFVLEKGM-KGLSAPKIGGKLSLRASITGEIVMNGVEVSEDALLPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370 L+ A +S + AE + R++ D+P + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|187927215|ref|YP_001897702.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12J] gi|241661736|ref|YP_002980096.1| acyl-CoA dehydrogenase domain-containing protein [Ralstonia pickettii 12D] gi|309780086|ref|ZP_07674838.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|187724105|gb|ACD25270.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|240863763|gb|ACS61424.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] gi|308921118|gb|EFP66763.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 385 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 27/321 (8%) Query: 141 YLMAQLEA-GHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 Y MA E GH+ V A V M TP + + S E AP Sbjct: 67 YAMAMAETLGHIHCGGVPMAIGVQTDMATPAL-----ARFGSDELRAQFLAPAISGDAVA 121 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 +G++E G+D+A+I + +K D Y ++G K W +S +D +LA Sbjct: 122 CVGVSEPSAGSDVASIKTTARKDGDD-YIINGSKMWITNSLQADWMCLLANTSDDPAHRN 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 ++ + G+ + KIG S+ T + F + + +G+ G ++ Sbjct: 181 KSLIIVPMNTKGVSVGKKIRKIGMNSSDTGLIYFDDVRVPQRYRIGE----EGKGFTYQM 236 Query: 315 LIY----LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + L +A S++ M + + YAR R + G L+D + +A++ ++ A Sbjct: 237 LQFQEERLWAAASSLATMTMCIETTAEYARERKLFGASLLDNQWVHFKLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + + +E A+ A++ A ++A V ++ GG G+ + + Sbjct: 297 ALTYRACDLYIQGQDVTELASMAKLKAG-------RLARIVPDACLQFWGGMGFTWDNPV 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R+YR+ SI G+ M+ Sbjct: 350 SRYYRDGRLGSIGGGADEVML 370 >gi|66814650|ref|XP_641504.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium discoideum AX4] gi|60469536|gb|EAL67527.1| isovaleryl-CoA dehydrogenase, mitochondrial [Dictyostelium discoideum AX4] Length = 415 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K ++G + L+G+K W + P ++ ++ A+ + G + Sbjct: 156 LAMSEPNAGSDVVSMKTNAKK-TEGGWLLNGNKMWITNGPDANVLVVYAKTDINAGSKGI 214 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + F + D NV +K+L+ Sbjct: 215 TAFLIEKEMKGFSTGQKLDKLGMRGSNTCELVFEDCF---VPDENVLGTVGGGVKVLMSG 271 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +S M+ + + Y +R G + + +M+ +AD+ + A+ + Sbjct: 272 LDYERLVLSAGPLGIMQACMDNVVPYLHQREQFGKPIGEFQLMQGKVADMYTLLNASRSY 331 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D + ++ A A I+ + + A + +A++ +GG+GYI E R Sbjct: 332 VYSVAKSADAGYTSRKDCA-AVIL------YTAENATQMALQAIQTLGGNGYINEFPTGR 384 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 385 LLRDAKLYEIGAGT 398 >gi|313240936|emb|CBY33220.1| unnamed protein product [Oikopleura dioica] Length = 411 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 21/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-CFL 257 L ++E G+D+ ++ + K D + L+G K W + P +D I+ A+ + Sbjct: 151 LAMSETGSGSDVMSMKIRADKKGDH-WILNGTKMWITNGPTADTMIIYARTDQDCKPAHG 209 Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + + DG+ +G C QRL +K+G R + T EL F N + + N+ G + +L+ Sbjct: 210 ITAFIVDGNADGFHCAQRL-DKLGMRGSPTGELVFENV---AVHEDNILGGIGQGAYVLM 265 Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + +SG V L +A I YA R G + + +++ IAD+ ++A+ Sbjct: 266 SGLNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLIQGKIADMYTTLSASR 325 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +++A + D + + A + + + A V +A++ +GG+GYI + Sbjct: 326 SYLYQVARAADNGHFNNADCAGIIL-------YTAEKATQVCLDAIQILGGNGYINDYPT 378 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 379 GRFLRDAKLYEIGAGT 394 >gi|300313969|ref|YP_003778061.1| isovaleryl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300076754|gb|ADJ66153.1| isovaleryl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 394 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P +D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGPDADVLVVYAKTDLEAGARGM 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + + + NV G + +L+ Sbjct: 188 TAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDC---EVPEENVLGGVGRGVNVLMSG 244 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG M+ + + Y R G + + +M+ +AD+ + A A Sbjct: 245 LDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMACKAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + + D A S + A + A Y + A + EA++ +GG+GYI E + R Sbjct: 305 VYAVGQACDRADSADKVRALRKDAAGAILY-SAEKATWMAGEAIQSLGGNGYINEYPVGR 363 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 364 LWRDAKLYEIGAGT 377 >gi|108801042|ref|YP_641239.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870184|ref|YP_940136.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126436879|ref|YP_001072570.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108771461|gb|ABG10183.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696273|gb|ABL93346.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126236679|gb|ABO00080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 57/306 (18%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +T + W P I S E + I + +TE G+D+A I + + D Sbjct: 102 LTNDEQKQRWMPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD 148 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 + ++G K F+SS ++ D +++A+ + G F+V R +E G R +K Sbjct: 149 -WIINGSKTFISSGINCDLCVVVARTDPEAGHKGFTLFVVERGME-----GFTRGRKLDK 202 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMR 329 +G S T EL F N LLG ++ P E + I AI +++G R Sbjct: 203 MGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGAR 256 Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAK 384 E + Y + R G QP+ + +A++ ++ R + + Sbjct: 257 AVFDETLQYCKDRKAFG-----QPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGE 311 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + EAA A K+W + A ++ ++ GG GY+ E +AR Y + +I Sbjct: 312 LTAVEAAKA-------KWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFG 364 Query: 445 GSGNAM 450 G+ M Sbjct: 365 GTTEIM 370 >gi|226364143|ref|YP_002781925.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242632|dbj|BAH52980.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 16/262 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE G+DIA++ + ++ DG + LSG K ++S+ +D ++ A+ + G Sbjct: 120 GFALTEPDAGSDIASMRTTARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F++P+ G+P G+ Y ++K+G RS T + + L D V T Sbjct: 179 ITAFVLPQ----GTP-GVSYSEPQDKLGIRSAPTYTVYLDDVV--LPHDAVVGTEGRGGN 231 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L+ A + V+ M +A R + + P+ + + L A + Sbjct: 232 IALTALNRARIDVAAMANGIALRAWELGRSYAAERKQFGHPIAEFQAIQLLLGACDAQLV 291 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 S R+ + D A + A R A ++KY + +++ + ++ GG+G++ E I R Sbjct: 292 SSRV--TADWAADVKDTGADLRRAASVSKYVATEACFSIVDQTVQIHGGAGFMRESEIER 349 Query: 433 HYRESPANSILLGSGNAMVLDV 454 YR+ I G+ +L + Sbjct: 350 LYRDCRILRIFEGTSQIQLLTI 371 >gi|226309268|ref|YP_002769228.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226188385|dbj|BAH36489.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 611 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 74/327 (22%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA + F R + T + LTE G+D+ A ++ DG + + G Sbjct: 146 QKHWAKEGFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEG 192 Query: 231 HKWFLSS-PMSDA-----FIMLAQVEGR------VGCFLVPR------LLEDGSPNGLCY 272 K F+S + D ++LA+ EG + F VP+ LE G NG+ Sbjct: 193 VKRFISGGDVGDTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSDTLELGERNGVYV 252 Query: 273 QRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP----VEDMKILIYLDSAIMS 324 +++K+G +S+ T EL F T G+L+GD++ +E+ ++++ + Sbjct: 253 TGVEHKMGLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMV----GTKA 308 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATA 371 + A+ YA+ R + G L + P ++R++A + A A Sbjct: 309 TGTLSTGYLNALEYAKER-IQGADLTELTNKTAPRVAITHHPDVRRSLA-----MQKAYA 362 Query: 372 LSFRLANSFDEAKSRSEEAAY---------ARI---MAPITKYWCCKMAPAVIAEAMECI 419 R + A ++ A AR+ + PI K + A ++ E+++ + Sbjct: 363 EGLRAVYLYTAAHQNADVAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTL 422 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GGSGY+++ I ++ R++ +++ G+ Sbjct: 423 GGSGYLQDYPIEQYIRDAKIDTLYEGT 449 >gi|118589277|ref|ZP_01546683.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM 12614] gi|118437977|gb|EAV44612.1| putative acyl-coa dehydrogenase protein [Stappia aggregata IAM 12614] Length = 593 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 36/291 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D I + A Sbjct: 160 MNLTEPQAGSDLNALKAKAERRDDGTYRIFGQKIFITYGDHDLTDNIIHMVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 +G + FLVP+ L +DGS N + +++K+G + T + + + G+L+ Sbjct: 220 GTKG-ISLFLVPKFLVNDDGSLGERNDVKVGGVEHKMGIHGSPTCTMVYGDEGGAIGWLV 278 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-------VSGGI--LI 350 G+ N + M L I + + A+ YA R G+ + Sbjct: 279 GEENRGLACMFTMMNNARLAVGIQGLGVAERAYQHALAYALERKQGRAPGDTGEGMSPIA 338 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY------ARIMAPITKYWC 404 P +KR + + A A+ + A++ D +K +EA A ++ PI K Sbjct: 339 RHPDIKRMLLGMKARTQVARAICYACAHAIDMSKIAEDEAGKTFWSERASLLTPIAKALP 398 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 V + ++ GG G+IEE A+H R++ I G+ +D++ Sbjct: 399 TDFGVEVASLGIQIHGGMGFIEETGAAQHLRDARIAPIYEGTNGIQSIDLV 449 >gi|332262576|ref|XP_003280338.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform 2 [Nomascus leucogenys] Length = 408 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 21/200 (10%) Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FLVP GL + ++K+G R ++T L F + + ++ P Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257 Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+ A++YA R G L V++ +AD+AL + Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGVPLTKLQVIQFKLADMALAL 317 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY+ Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 371 EMPAERHYRDARITEIYEGT 390 >gi|260558135|ref|ZP_05830345.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260408408|gb|EEX01716.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 407 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 324 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397 >gi|226361779|ref|YP_002779557.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240264|dbj|BAH50612.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 384 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 18/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255 + +TE G+D+ I + + D Y ++G K F+S+ +D +++A+ + G G Sbjct: 128 VAMTEPGAGSDLKNIKTTALRDGDH-YVINGAKTFISNGSQADLIVVVAKTDPAAGAKGV 186 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGPVED 311 L+ ++E G R+ +K+G T EL F + L G+ G + Sbjct: 187 SLI--VVETAEAPGFTRGRILDKVGQHGADTSELSFEDVRVPVANLLGGEEGRGFGQLMT 244 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + +V+ M ++ E + Y + R G + D K +A+ AA Sbjct: 245 QLAQERLLIGVTAVATMEAAVTETVEYTKSRSAFGQSIFDFQNTKFVLAECQTVAHAARV 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 D R A + K+W + VI ++ GG GY+ E IA Sbjct: 305 F-------IDSCIERHLRGNLDTTTAAMAKWWLTEQQCQVIDRCVQLFGGYGYMREYPIA 357 Query: 432 RHYRESPANSILLGSGNAM 450 R Y ++ I GS M Sbjct: 358 RMYADARVQKIYGGSNEIM 376 >gi|31793896|ref|NP_856389.1| acyl-CoA dehydrogenase FADE20 [Mycobacterium bovis AF2122/97] gi|31619490|emb|CAD94928.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE20 [Mycobacterium bovis AF2122/97] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|302344677|ref|YP_003809206.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301641290|gb|ADK86612.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 389 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 11/269 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LGLTE G+D +I ++ + D Y L+G K F+++ P++D ++ A+ + G F + Sbjct: 123 LGLTEPNAGSDAMSIATRATRQGDH-YVLNGSKMFITNGPIADVVLVYAKTDPAAGPFGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315 + + G R K G+R + T EL F N L+G+ N V + Sbjct: 182 SAFIVETKWPGFSVSRKLKKAGHRGSPTGELRFDNLEAPAENLVGEENGGIAVVMRGLDI 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A V R ++ ++ YA+ R G + +++ +A++ AA +++ Sbjct: 242 ERVVCAAGCVGICRQAIDLSLKYAKEREQFGRPIAKFQMIQAKLAEMYALYEAAKNMTYA 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A ++++ + R MA + + A V +EA++ GG GY E ++ R +R Sbjct: 302 AAVMAEQSQRGGKGTELTR-MAAAAVMFSAEAATKVASEAVQIHGGYGYCLEYAVQRLWR 360 Query: 436 ESPANSILLGSGNAMVLDVL---NLLEKG 461 + A +G+G + ++ LL++G Sbjct: 361 D--AKLFEIGAGTTEIRKLIIARELLQRG 387 >gi|229491731|ref|ZP_04385552.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229321412|gb|EEN87212.1| butyryl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 611 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 74/327 (22%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA + F R + T + LTE G+D+ A ++ DG + + G Sbjct: 146 QKHWAKEGFERGWAGT-------------MVLTEPDAGSDVGAGRTKAIAQDDGTWHIEG 192 Query: 231 HKWFLSS-----PMSDAF-IMLAQVEGR------VGCFLVPR------LLEDGSPNGLCY 272 K F+S + F ++LA+ EG + F VP+ LE G NG+ Sbjct: 193 VKRFISGGDVGGTAENLFHLVLARPEGAGPGTKGLSLFYVPKSHFNSETLELGERNGVYV 252 Query: 273 QRLKNKIGNRSNATVELEFSNT----FGFLLGDLNVSTGP----VEDMKILIYLDSAIMS 324 +++K+G +S+ T EL F T G+L+GD++ +E+ ++++ + Sbjct: 253 TGVEHKMGLKSSPTCELTFGATDVPAVGWLVGDVHNGIAQMFQVIENARMMV----GTKA 308 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATA 371 + A+ YA+ R + G L + P ++R++A + A A Sbjct: 309 TGTLSTGYLNALQYAKER-IQGADLTELTNKTAPRVAITHHPDVRRSLA-----MQKAYA 362 Query: 372 LSFRLANSFDEAKSRSEEAAY---------ARI---MAPITKYWCCKMAPAVIAEAMECI 419 R + A ++ A AR+ + PI K + A ++ E+++ + Sbjct: 363 EGLRAVYLYTAAHQNADVAELVSGADAELAARVNDLLLPIVKGVGSEKAYELLTESLQTL 422 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GGSGY+++ I ++ R++ +++ G+ Sbjct: 423 GGSGYLQDYPIEQYIRDAKIDTLYEGT 449 >gi|215482249|ref|YP_002324431.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|301345865|ref|ZP_07226606.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301512721|ref|ZP_07237958.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|301596581|ref|ZP_07241589.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|213985921|gb|ACJ56220.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] Length = 387 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 304 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377 >gi|28211702|ref|NP_782646.1| butyryl-CoA dehydrogenase [Clostridium tetani E88] gi|28204144|gb|AAO36583.1| butyryl-coA dehydrogenase [Clostridium tetani E88] Length = 392 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 19/269 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE GTD A+ ++ K D Y L+G K F+++ + +I+ + G + Sbjct: 134 FALTEPNAGTDSASQNTKAIKQGDN-YILNGQKCFITNGGEAGVYIVFGMTDKSKGTRGI 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +NK+G R+++T EL F N ++ N+ KI + Sbjct: 193 TGFIIEKDHPGFYIGKKENKMGIRASSTSELIFKNC---VIPKENMIGKEGRGFKIAMQA 249 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD ++++ V +A+ + Y + R G L ++ +AD+ I A+ L Sbjct: 250 LDGGRIAMASQAVGIAQGAMDRTVDYLKEREQFGRPLSSFQGLQWMLADMETRINASRLL 309 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A FD ++ +++AA A++ A T A V +A++ GG GY+++ + R Sbjct: 310 VQKAAVKFDNGENVNKDAAMAKLFAAET-------AMDVTIKAVQLHGGYGYMKDYPLER 362 Query: 433 HYRESPANSILLGSGNAMVLDV-LNLLEK 460 R++ I G+ + + N+L+K Sbjct: 363 MMRDAKITEIYEGTSEVQKMVISKNILDK 391 >gi|28211699|ref|NP_782643.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium tetani E88] gi|28204141|gb|AAO36580.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium tetani E88] Length = 394 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 20/256 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCF 256 G GLTE GTD Q + DG Y L+G K F + SP++D F++ A + G Sbjct: 137 GFGLTEPNAGTDAGG--QQTTAVLDGDHYILNGEKKFTTNSPVADIFVVFAMTDKEKGPK 194 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + + + S G +L++ +G R+ E + + + N+ + KI + Sbjct: 195 GISAFIVEKSFPGFSIGKLEDTMGLRAAKVAETIYKDC---KVPKENLLGKEGDGFKIAM 251 Query: 317 Y-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + V+ + +A+ A Y R G L ++ +AD+ L I A Sbjct: 252 QTLDGGRIGVAAQALGIAQGAFEKAKKYMMERKQFGKALCKFQGLQWMMADMDLKIEQAR 311 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A D S AA A++ A A V EA++ GG GYI++ + Sbjct: 312 YLVYKAAWEKDNGLPYSLSAARAKLAA-------TDAAMFVTTEAVQLFGGYGYIKDYPV 364 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 365 ERMMRDAKITQIYEGT 380 >gi|308274691|emb|CBX31290.1| Acyl-CoA dehydrogenase, short-chain specific [uncultured Desulfobacterium sp.] Length = 384 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML------AQVEGR 252 +TE + G+D ++ + + DG Y L+G K F+++ + ++ A+ Sbjct: 123 FAMTEPQAGSD--PVSQKTSAVKDGEYYVLNGTKRFITTGKNAGLTIVTAITDSAKKHKG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+V + +P GL ++++K+G R + T +L F N DL S G + Sbjct: 181 ISAFIVVK----DTP-GLIVGKVEDKMGLRGSDTCDLVFDNC-RVHKDDLLGSEG--DGF 232 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ V +A+A + Y+ +R G + ++ +A++A ++ Sbjct: 233 KIAMSALDGGRIGIAAQSVGVAQAALDAAVKYSTQREQFGQTISKFQGLRWMVAEMATEV 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L F A D+ + + +A+ A++ A +M V A+A++ GG G+I+ Sbjct: 293 EAARQLMFSAAAMKDKGVNYTLQASMAKLFAS-------EMVNRVTAKALQMHGGYGFIK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E + R YR++ +I G+ Sbjct: 346 EYPVERFYRDARVFTIYEGT 365 >gi|260553738|ref|ZP_05826009.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260405138|gb|EEW98637.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 18/243 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLV 258 LTE G+D A++ + + DG Y L+G K F++ +P + F ++A+ + G + Sbjct: 124 LTEPDAGSDAASLKTTA--VKDGEFYILNGTKRFITNAPHAGVFTVMARTNSDIKGAGGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 182 SAFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A +SV L ++++YA R G + + +++ +AD +I AA + Sbjct: 241 DKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMV 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A D ++ S EA+ A++ A +M V ++ GG+GYI E +I R Sbjct: 301 LDAARLRDAGQNVSTEASCAKMFAT-------EMCGRVADRCVQIHGGAGYISEYAIERF 353 Query: 434 YRE 436 YR+ Sbjct: 354 YRD 356 >gi|119504801|ref|ZP_01626879.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2080] gi|119459406|gb|EAW40503.1| acyl-CoA dehydrogenase family protein [marine gamma proteobacterium HTCC2080] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 38/266 (14%) Query: 190 PMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-- 246 P+ + +GLTE G+D + S+G+ + + ++G KWF S AF + Sbjct: 110 PLVAGDIYPSVGLTEPDVAGSDPTLMQSRGE-LDGNEWLINGRKWFTSGANVAAFTTVFC 168 Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 Q G+ +VP + G +R+ +G+ ELE + G L Sbjct: 169 ETEPEQQRHGKFSAIIVPT-----NTPGYRIKRVVKTMGDTVGGHCELELDHVRVPAGNL 223 Query: 299 LGDLNVS-------TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 LG+ GP + +L A + M +YA +R+ G +L + Sbjct: 224 LGERGKGFTIAQKRLGPGRIFHCMRWLGQAQRAFELM-------CNYAGKRYAHGSLLSE 276 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + ++R IA+ A +I AA ++ A D AR+ + K+W +M V Sbjct: 277 KGEIQRYIAESAAEIQAARLMTLDAARVMDSGDD-------ARVQIALIKFWGARMLHNV 329 Query: 412 IAEAMECIGGSGYIEERSIARHYRES 437 I A++ G G E+ + YRE+ Sbjct: 330 IDRAIQVHGALGVTEDTPLEFMYREA 355 >gi|160876083|ref|YP_001555399.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS195] gi|160861605|gb|ABX50139.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS195] gi|315268279|gb|ADT95132.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS678] Length = 389 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D + L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYNVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|163746739|ref|ZP_02154096.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] gi|161379853|gb|EDQ04265.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 16/265 (6%) Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P ++ AI LTE + G+D+A T + +G Y L G K W + +++ + + A Sbjct: 114 PKTRSGQAISAFALTEPQSGSDVANSTMTAKADGNG-YVLDGRKTWISNGGIANVYTVFA 172 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-FLLGDLNVST 306 + G + + GL + + AT+ + G LLG+ Sbjct: 173 RTGEAPGAKGLSAFIVPADTPGLKVEERLEVMAPHPLATLHFDGVKLPGSALLGE--AGR 230 Query: 307 GPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M +L S + + + G R +L EA+ RHV G L + +++ IAD+A+ Sbjct: 231 GFAIAMSVLDVFRSTVAAAALGFARRALDEALARVTSRHVQGAPLSELQLVQGHIADMAV 290 Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 D+ AA L +R A + D R + EAA A++ A A VI A++ GG G Sbjct: 291 DVDAAALLVYRAAWTKDSGAPRVTREAAMAKLFA-------TDQAQKVIDTAVQLHGGDG 343 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 ++ R YRE A I G+ + Sbjct: 344 VRHGEAVERLYREIRALRIYEGASD 368 >gi|86740254|ref|YP_480654.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3] gi|86567116|gb|ABD10925.1| Butyryl-CoA dehydrogenase [Frankia sp. CcI3] Length = 387 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 26/269 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + A GL+E+ G+D AA+ ++ + D + LSG K W ++ +S+ + +LA Sbjct: 118 PLARGEAAFSYGLSEREAGSDTAAMKTRAVRDGDH-WVLSGQKSWITNAGISEYYTVLAV 176 Query: 249 V--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 +GR G + ++E P G + K+G + + T EL F + L+G+L Sbjct: 177 TDPDGRRGANISAFIVESSDP-GFSVGSPEKKLGIKGSPTRELLFDDCRIPEDRLIGELG 235 Query: 304 VSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKR 357 +++ L LD +++ + +A+ A++Y + R G + D ++ Sbjct: 236 ------HGLRLALRTLDHTRVTIGAQAIGIAQGALDLALNYVKERKQFGKRIADFQGIQF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A+ + AA + + A AKS +A K A V +A++ Sbjct: 290 MLADMAMALEAARQMVYVAA-----AKSERGDADLT-FFGAAAKCLASDTAMQVTTDAVQ 343 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 +GG GY ++ R R++ I G+ Sbjct: 344 LLGGYGYTQDFPAERLMRDAKITQIYEGT 372 >gi|88801128|ref|ZP_01116673.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297] gi|88776109|gb|EAR07339.1| Acyl-CoA dehydrogenase [Reinekea sp. MED297] Length = 391 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A++ ++ KI DG Y L+G K W +SP++D F++ A+++G + F++ Sbjct: 136 FGLTEPDSGSDPASMRTRA-KIVDGGYQLTGSKMWITNSPLADVFVVWAKLDGEIAGFIL 194 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R + GL ++ K R++ T E+ F L + G L Sbjct: 195 ERGM-----TGLSTPKINGKFSLRASVTGEIVMDEVFVPEANRLPKAKGLSAPFGCLNKA 249 Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 I ++ A A +Y R L ++++ +AD+ +IA + ++ Sbjct: 250 RYGIAWGAMGAAECCFAAARNYTLERQQFNRPLAANQLIQKKLADMQTEIALGLQGALQM 309 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D + E + + K C A + + GG+G +E + RH Sbjct: 310 GRMMDAGQCPVE-------LVSLMKRNNCGKALDIARTVRDMHGGNGISDEYPVIRH 359 >gi|319763616|ref|YP_004127553.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317118177|gb|ADV00666.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVE------G 251 LTE G+D A++ + I DG Y ++G K F++ +P + F ++A+ G Sbjct: 122 FALTEPEAGSDAASLRTTA--IRDGDFYVVNGTKRFITNAPQAGMFTLMARTNPANKGAG 179 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 V F+V E G+P G+ + + K+G + T ++ F N L+G L G Sbjct: 180 GVSAFIV----EAGTP-GISFGKRDKKMGQKGAHTCDVIFENVRVPAANLIG-LKEGQGF 233 Query: 309 VEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L I++ + ++V+ + +A + YA R G + + +++ +AD Sbjct: 234 KTAMKVLEKGRIHIAAVAVAVAERMLDMA--LRYAAERRQFGQPIGNFQLVQAMLADSKA 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA + A D+ S EA+ A K + +M V A++ GG+GY Sbjct: 292 EIYAARCMVLDAARRRDDKLPNSTEASCA-------KMFATEMCGRVADRAVQIFGGAGY 344 Query: 425 IEERSIARHYRE 436 + E +I R YR+ Sbjct: 345 MSEYAIERFYRD 356 >gi|291294664|ref|YP_003506062.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber DSM 1279] gi|290469623|gb|ADD27042.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279] Length = 394 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 24/266 (9%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-----EGRVG 254 GLTE G+D AA+ ++ + + L+G K F++ ++ +++ A+ E + Sbjct: 132 GLTEPGSGSDAAAMRTKAEDTGSS-WVLNGTKQFITQGSVAGVYVVNARTDAAPSEEKKH 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 L + E P GL R + K+G ++ T ++ F + LLG+ G + Sbjct: 191 LGLSALVFEAPIP-GLRIGRKERKLGLNASDTAQIIFEDITLPKEALLGERG--RGFYDV 247 Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M++L + A M+V R +L A YA R G + + + +AD+A + AA Sbjct: 248 MRVLEGGRIGIAAMAVGLGRAALEFATKYALEREQFGRPIAEFQAVSHKLADMATQLEAA 307 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A D K AA A++ A C EA++ +GG GYI+E Sbjct: 308 RLLYLKAAELRDAGKPFGPAAAQAKLFASEVAVQACD-------EAIQILGGYGYIKEYP 360 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 + R++R++ I G G + VL V+ Sbjct: 361 VERYWRDARLTRI--GEGTSEVLKVI 384 >gi|218288739|ref|ZP_03493002.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241097|gb|EED08273.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 26/259 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW-FLSSPMSDAFIMLAQ 248 P + + LTE G+ A I + ++ D Y L+G KW + S ++D F++ + Sbjct: 108 PFVAGDIRVTFTLTEPNSGSG-ADIKTTARREGDE-YVLNGEKWMIIFSDVADYFLLFCR 165 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 +EG G LVPR GL + + +G A L + + L Sbjct: 166 LEGTSGGEGTLALLVPR-----DAPGLTIELMAPAMGIAGTAHGHLRLRDCRVPVANRLG 220 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI---- 359 G ++ +LD + ++ V AE H + QP+ KR I Sbjct: 221 -EEGDGLEVAFRGFLDPSRTAIGMTCVGAAERALELAANHALRRVTFGQPLAKRQIIQMW 279 Query: 360 -ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 A++A DI AA L A FDE + EAA A++ A +M V +A++ Sbjct: 280 LAEMATDIEAARQLVLHAARRFDEGHPITVEAAMAKMFA-------TEMLQRVTDKALQI 332 Query: 419 IGGSGYIEERSIARHYRES 437 GG GY + I R YR++ Sbjct: 333 HGGPGYFKSSEIERIYRDA 351 >gi|325673562|ref|ZP_08153253.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325555583|gb|EGD25254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 405 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 26/260 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA++++ + D Y L+G K F+S + SD ++++A+ + F Sbjct: 146 LTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSDVYVVMARTGAAGARGISAF 204 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP+ GL + + K+G + T ++ + N+ G E +I + Sbjct: 205 IVPK-----DTPGLSFGANEKKMGWNAQPTRQVILDQV---RVPAANLLGGEGEGFRIAM 256 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A SV G + +L +A+ Y R G L++ ++ +AD+ +++ AA Sbjct: 257 KGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFRLADMRIELEAAR 316 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L +R A++ D + E + + K + V EA++ GG GY+ E + Sbjct: 317 TLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQLHGGYGYLAEYGL 370 Query: 431 ARHYRESPANSILLGSGNAM 450 + R+ + IL G+ M Sbjct: 371 EKIVRDLRVHQILEGTNEIM 390 >gi|315095162|gb|EFT67138.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL060PA1] Length = 382 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A + ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|298714025|emb|CBJ27257.1| isovaleryl-CoA dehydrogenase [Ectocarpus siliculosus] Length = 441 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 33/261 (12%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDA------FIMLA 247 S G+ ++E GTD+ +T++ DG+ + + G K ++++ +D F++ A Sbjct: 167 STIAGMCMSEPGAGTDVLGMTTKAVPSPDGLSFKIDGAKMWITNGTTDGLTTGDVFLVYA 226 Query: 248 QV-EGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + GR + F+V E G P Q+++ K G R++ T EL F L+GD Sbjct: 227 RTGPGRQDISMFIV----EKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGD 282 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----EAIH-YARRRHVSGGILIDQPVMK 356 N + + ++ L+ ++++ M V +A EA++ Y + R G + ++ Sbjct: 283 ENGAM-----LCMMRNLEIERVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQ 337 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + IAD + A + +A + D + + + + A TK +C MA V AM Sbjct: 338 KHIADSYAEYMAGKHYLYAVAANLDLSSTGNG------LDADGTKLYCTTMAKNVADRAM 391 Query: 417 ECIGGSGYIEERSIARHYRES 437 + +GG GY +E I R +R++ Sbjct: 392 QVLGGYGYCDEYQIERLWRDA 412 >gi|39936511|ref|NP_948787.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39650367|emb|CAE28889.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 385 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 22/262 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ ++ G G + L Sbjct: 128 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTL 186 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + + GL + + K+G + T + F N LGD + KI + Sbjct: 187 VVEKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 240 Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ S+ G + +L + + Y + R G L + ++ +AD+A ++ AA L Sbjct: 241 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 300 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + D + A A + + K + V EA++ GG GY+ E I + Sbjct: 301 LWRAAAALDR------KDADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEK 354 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 355 LVRDLRVHQILEGTNEIMRLIV 376 >gi|327310601|ref|YP_004337498.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20] gi|326947080|gb|AEA12186.1| Butyryl-CoA dehydrogenase [Thermoproteus uzoniensis 768-20] Length = 410 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 29/274 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + +TE G+D+A I ++ +K D + ++G K F+SS ++D F++LA+ Sbjct: 122 PIARGEKLGAFAVTEPCCGSDVAGIQTRAEKKGDR-WIINGRKAFISSSDVADYFVVLAR 180 Query: 249 V----EGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + R L ++E G+P G ++ +K+G + EL F N + D N Sbjct: 181 TYPPPDKRTRYLGLTFFIVEKGTP-GFKVEQCYHKMGLHGDNACELVFENV---EVPDEN 236 Query: 304 VSTGPVEDMKILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 G E+ IY D + V+ V +A+ A Y +R G + Sbjct: 237 -RVG--EEGMGFIYAMETFDRTRIGVAAQAVGMAQGAFEKAFQYVHQRQAFGVPVAYFQA 293 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ ++ D+A + +A L++ A DE + +A + K++ + A +I+E Sbjct: 294 IQFSLMDMAAKLMSARLLTYLAAKLADEGRKEF------TFVASLAKFYATEAAEEIISE 347 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A+ GG G I E I R R+ I G+ N Sbjct: 348 AINLHGGVGVIVETGIERFLRDVKITQIYEGANN 381 >gi|323487520|ref|ZP_08092814.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163] gi|323399202|gb|EGA91606.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14163] Length = 379 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 22/281 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K LTE G+D A + +K D Y ++G K F+++ P+ D ++ A Sbjct: 111 PVMKGEKEGTFALTEPSAGSDAATQNTIARKDGD-YYIINGRKAFITAAPLCDFAVVFAA 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + +G + + + G + + K+G + T ++ N +LG+ Sbjct: 170 TDVSLGARGITAFIIERDTPGYSVGQPERKMGVNGSPTADIILENVKVHKSQILGE---- 225 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 G M + LDS + V+ + +AEA + Y R+R G L + ++ +A Sbjct: 226 EGKAFQMAMKT-LDSGRLVVAAQCLGIAEAAMKEAVGYVRQRRQFGAALSEFQGIQFMLA 284 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ + A AL + A D + ++EAA A KY+ +M + A+A++ G Sbjct: 285 DMETKLCCARALIYDAAEKKDAGMNITKEAAAA-------KYFASEMCNEIAAKALQLHG 337 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 GY+++ I R +R++ +I G+ + + + KG Sbjct: 338 AYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQVLKG 378 >gi|6959522|gb|AAF33139.1|AF196567_15 putative acyl-CoA dehydrogenase [Pseudomonas stutzeri] Length = 513 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 43/291 (14%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE 250 + + + + ++E G+D I + ++ DG + L+G K F+S + ++ A+I+ A+ E Sbjct: 248 RGDIHVSVAMSEPEAGSDANGIRTAVKR--DGCEWILNGSKHFISDADIASAYIVTARSE 305 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FG 296 + CFLV D GL ++ +G+R L F++ Sbjct: 306 EGISCFLV-----DRDTPGLELGPIQEMMGHRGTHQHGLFFTDCRIAPQQLLGEPGRGMS 360 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVM 355 +LG LNV+ L Y+ + + GM L E ++ +A++R G + ++ Sbjct: 361 LVLGHLNVAR--------LAYVGARAV---GMASKLLEMSVDFAKQRSQFGAPIGSFQMV 409 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 ++ +AD+ +I A + A D+ + E+ + ++ A +M V A Sbjct: 410 QKMLADMQCEIYGARMMLLNAAWEIDQGRDVREKVSMVKLFAS-------EMLGRVADSA 462 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNA-MVLDVLNLLEKGTNLF 465 ++ GG GY E I R+YR++ + G+ ++ LLE+G +L Sbjct: 463 VQIFGGMGYCTELPIERYYRDARVFRLYDGTSEIHRIMIARRLLERGISLL 513 >gi|85106801|ref|XP_962250.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] gi|28923851|gb|EAA33014.1| acyl-CoA dehydrogenase, mitochondrial precursor [Neurospora crassa OR74A] Length = 433 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 30/298 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 W + ++Y P T+ L+E G+D A+ ++ + +G Y ++G K Sbjct: 151 WGSEALKKKY-----LPKLATNTVGSFCLSEPVSGSDAFALATRAVETENG-YKINGSKM 204 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF- 291 W +S +D FI+ A V+ G + + + G + + K+G ++++T L F Sbjct: 205 WITNSMEADFFIVFANVDPSKGYRGITAFIVEKGMKGFSIAKKEKKLGIKASSTCVLNFD 264 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHV 344 N G + + G + + +I I ++G+ + E A+ Y Sbjct: 265 DVEVPKENILGKVGEGYKYAIGILNEGRIGIG-----AQMTGLALGAWENAVKYVWNDRK 319 Query: 345 SGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKY 402 G L+ + M+ IA +IAAA AL + A R +EA +M A + K Sbjct: 320 QFGQLVGEFQGMQHQIAQSYTEIAAARALVYNAA--------RKKEAGEDFVMDAAMAKL 371 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + L+K Sbjct: 372 YASQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKTLQK 429 >gi|224369392|ref|YP_002603556.1| Acd8 [Desulfobacterium autotrophicum HRM2] gi|223692109|gb|ACN15392.1| Acd8 [Desulfobacterium autotrophicum HRM2] Length = 414 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 21/277 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQ 248 P+ K + LTE RGG+D T+ + + D + L+G K F+ +D F++ A+ Sbjct: 115 PLLKGEIFAAECLTEPRGGSDFFGTTTTARDMGDH-FLLNGQKRFIVGGEGADYFLVYAR 173 Query: 249 ----VEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 VE R G CF+V R G+ Q L +G R + F + L+ Sbjct: 174 TDTDVEPRNGISCFIVDR------QEGVETQYLYGLMGCRGGGAARMVFKDVKVPRYNLV 227 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G+LN M I L +A M++ ++ A Y +R G + + + Sbjct: 228 GELNQGVKIFNTMMIPERLGTAAMTIGAAAPAVDVATGYTSKRKAFGKPVAAFQGVSFQV 287 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A+ + AA A+ + A + D + E R+++ +K + + + AM+ + Sbjct: 288 AEAVTLLDAARAMIYTTARAVD---GKIYEKKIRRLVSQ-SKKFVTESCQKAVHNAMQVM 343 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GG GY + R +R+ SI G+ M + + N Sbjct: 344 GGIGYTNIYPVERIFRDLRLASIWTGTNEVMSMIIAN 380 >gi|52080517|ref|YP_079308.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52785896|ref|YP_091725.1| YngJ [Bacillus licheniformis ATCC 14580] gi|319645521|ref|ZP_07999753.1| YngJ protein [Bacillus sp. BT1B_CT2] gi|52003728|gb|AAU23670.1| Acyl-CoA dehydrogenase [Bacillus licheniformis ATCC 14580] gi|52348398|gb|AAU41032.1| YngJ [Bacillus licheniformis ATCC 14580] gi|317392407|gb|EFV73202.1| YngJ protein [Bacillus sp. BT1B_CT2] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 22/267 (8%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG- 251 T A+G GLTE G+D ++ + D Y +SG K ++++ +++ V G Sbjct: 116 TGRALGAFGLTEPNAGSDAGGTRTKARSEGDS-YVISGEKCWITNAGFARTVIVTAVTGI 174 Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G ++ ++ G + +K+G R + T +L N + N+ P + Sbjct: 175 DDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNV---RVPKQNLLGSPEK 231 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 K L LD +S++ + V +A+ A+ YAR R G + ++ +AD+A+ Sbjct: 232 GFKQFLNTLDGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAM 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A + + A D+ + ++EAA+A++ A + C ++++ GG GY Sbjct: 292 EIELARNMVLKAAWLKDQGRPFTKEAAFAKLYASEMAFRTCN-------QSIQIHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 ++E + R R+ A + +G G + + Sbjct: 345 MKEYGVERMLRD--AKLMEIGEGTSEI 369 >gi|328883616|emb|CCA56855.1| putative acyl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 609 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/313 (22%), Positives = 141/313 (45%), Gaps = 53/313 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 Y+ N+A + +A+ + LTE G+D+ A ++ + DG + + G K F++ Sbjct: 139 YNEGNEAQKKVAQIAVEKRWGSTMVLTEPDAGSDVGAGRTKATQQEDGSWHIEGVKRFIT 198 Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S D +LA+ EG + FLVP+ D G+ NG+ +++K+ Sbjct: 199 SGEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYEFDWETGELGARNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333 G +++ T E+ F + G+L+GD + + M ++I ++ ++S + Sbjct: 259 GLKASNTCEMTFGDKHPAKGWLIGDKHDG---IRQMFLIIEFARMMVGTKAISTLSTGYL 315 Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380 A+ YA+ R V G L + P ++R++ +L A+ Sbjct: 316 NALEYAKER-VQGTDLANFMDKAAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQ 374 Query: 381 DEA--KSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 DE K + E A A ++ PI K + + +A++++ GGSG+++E I ++ Sbjct: 375 DEIAIKEAAGEDAKALHGLNDLLLPIVKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQY 434 Query: 434 YRESPANSILLGS 446 R++ +++ G+ Sbjct: 435 IRDAKIDTLYEGT 447 >gi|182434841|ref|YP_001822560.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775359|ref|ZP_08234624.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|178463357|dbj|BAG17877.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655692|gb|EGE40538.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 404 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 59/311 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDG 224 TP +W P+ + E DP A ++E G+D++A+T++ + I SD Sbjct: 104 TPDQLAEWVPQCYGDEDDPKVAA----------FCVSEPGAGSDVSAMTTKARYIEASDS 153 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNK 278 + +SG K W + +++ +++A V+ +G F+VP GL R K Sbjct: 154 -WVISGQKAWITNGGIAEVHVVVASVDPALGARGQAAFIVPP-----GTKGLTAGRTVKK 207 Query: 279 IGNRSNATVEL---EFSNTFGFLLG-------------DLNVSTGPVEDMKILIYLDSAI 322 +G R++ T +L E + LLG + + + G + + Sbjct: 208 LGLRASHTADLFLDEVTVPGHCLLGGKEKLDARLARAREGSTAKGQAAMATFEVSRPTVA 267 Query: 323 MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA---- 377 G+ R + A+ YA R G +I+ + A+ADI +I A L ++ A Sbjct: 268 AQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLLIWQAAWMAR 327 Query: 378 --NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +FD + ++K ++A A +A++ +GG+GY E + R YR Sbjct: 328 NDRTFDAGQG------------SMSKLRAGELAVAATEKAVQILGGAGYSREHPVERMYR 375 Query: 436 ESPANSILLGS 446 ++ +I G+ Sbjct: 376 DAKIYTIFEGT 386 >gi|114571235|ref|YP_757915.1| acyl-CoA dehydrogenase domain-containing protein [Maricaulis maris MCS10] gi|114341697|gb|ABI66977.1| acyl-CoA dehydrogenase domain protein [Maricaulis maris MCS10] Length = 391 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 51/276 (18%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA---QVEGRVG- 254 LTE G+D+AAI+++ + D Y +SG K F+S+ ++D +++ A + +G G Sbjct: 132 FALTEPDAGSDVAAISTRAELDGDH-YAISGEKTFISNGGIADFYVVFARTGEADGARGL 190 Query: 255 -CFLVP---------RLLEDGSPNGL-------CYQRLKNKIGNRSNATVELEFSNTFGF 297 +VP +E +P+ L C + ++IG E + F Sbjct: 191 SAIIVPATTPGLEVVERIETIAPHPLARLRFDKCRVPVTHRIG---------EGGSGFRI 241 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 +G L+V V ++ R +L EA ARRR++ G L D P ++ Sbjct: 242 AMGTLDVFRSTV-----------GAAALGFARRALDEATARARRRNLFGAPLADLPGVQT 290 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A+DI AA L +R A + D+ +R + EAA A K + + A I A+ Sbjct: 291 QLAEMAMDIDAAALLIYRAAWTKDQGAARVTREAAMA-------KLYATEAAQRAIDTAV 343 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + GG G + YRE A I G+ L Sbjct: 344 QIFGGLGVTKGSVPEALYREIRALRIYEGASEVQKL 379 >gi|149376829|ref|ZP_01894585.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149358836|gb|EDM47304.1| probable acyl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 379 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 11/254 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A I ++ + D Y ++G K F++S M +A G G + Sbjct: 124 LAVTEPGGGSDVANIKTRAVRDGDD-YIVNGSKTFITSGMRADHYTVAVRTGGEGHGGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 LL D G + K+G ++ T EL F + L+G N + + Sbjct: 183 LLLIDRDMPGFSTGKKLKKMGWWASDTAELFFEDCRVPANRLIGAENAGFIAIMSNFLFE 242 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L +IM+ ++L ++ +A +R G + V + + D+A + A ++R Sbjct: 243 RLSLSIMAYMTAEIALEASMAWAGQREAFGRPVNKFQVTRHKLVDMATQVDVAREYTYRC 302 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A K+ ++ A A K + + V EA++ GG GY+ E + R YR+ Sbjct: 303 AALMQAGKNPIKQVAMA-------KNFAVDVCEKVTREAVQIHGGMGYMRESVVERLYRD 355 Query: 437 SPANSILLGSGNAM 450 SI G+ M Sbjct: 356 GKILSIGGGTDEIM 369 >gi|108800705|ref|YP_640902.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119869844|ref|YP_939796.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108771124|gb|ABG09846.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119695933|gb|ABL93006.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 382 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253 + +TE G+D+A + + + D Y ++G K F++ + +D +++A+ R Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRR 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 G L+ ++EDG P G R K+G + T EL F++ LLG+ + + Sbjct: 183 GLSLI--VVEDGMP-GFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLG 239 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAA 369 L A+ SV+ R +L I Y + R G + K +A ++ +I AA Sbjct: 240 HNLAQERLTVAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEIEAAQ 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T L + + D SR + A K +C +M + ++ GG GY+ E Sbjct: 300 TMLDRAVLDHVDGVLSREDAAR--------VKLFCTEMQARAVDRCLQLFGGYGYMMEYP 351 Query: 430 IARHYRESPANSILLGSGNAM 450 IAR Y ++ I G+ M Sbjct: 352 IARLYNDARVARIYAGTSEVM 372 >gi|291296491|ref|YP_003507889.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber DSM 1279] gi|290471450|gb|ADD28869.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279] Length = 404 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 20/285 (7%) Query: 185 PTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 P KA P+ + L+E G+D+ A+ ++ + G Y L+G K W + + Sbjct: 111 PEQKARYLGPVARGESIAAFALSEPEAGSDVGALCTEA-RAEGGDYILNGQKTWISNGGI 169 Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 +D +++ A+ G G + ++E G+P +RL+ I A + E Sbjct: 170 ADFYVVFARAPGSQGAKGISAFVVEAGTPGLEVAERLEV-IAPHPLARLRFEHCRIPARQ 228 Query: 299 -LGDLNVSTGPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVM 355 LG+ G M+ L I+ S + G R +L EA+ A R + G L D + Sbjct: 229 RLGEEG--QGFKIAMQTLDIFRTSVAAAALGFARRALDEALFRATTRPLFGQTLADFQLT 286 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +AD+A+ I AA L++R A D+ + ++EAA A++ A T+Y A VI A Sbjct: 287 QARLADMAVKIDAAALLTYRAAWLRDQGQRVTQEAAMAKLTA--TEY-----AQQVIDGA 339 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ GG G + + YRE A I G+ L + L K Sbjct: 340 VQLWGGLGVTRGQVVESLYREIRALRIYEGASEVQQLIIARELLK 384 >gi|170722058|ref|YP_001749746.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169760061|gb|ACA73377.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 45/294 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + W P++ S E IG LTE + G++ + ++ + I DG Sbjct: 104 TPEQQQAWLPRLASGE--------------VIGCFCLTEPQAGSEAHNLRTRAELI-DGQ 148 Query: 226 YCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+S+ I+ A + +G FLVP +P G R ++K+ Sbjct: 149 WVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP----TDNP-GFKVDRSEHKM 203 Query: 280 GNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 G R++ T + F N LLG+ L ++ +E +I I A ++ R + Sbjct: 204 GIRASDTCAVTFDNCCIPAANLLGERGKGLAIALSNLEGGRIGI----AAQALGIARAAF 259 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 A+ Y+R R G + + + +AD+ + + AA L A + EA+ Sbjct: 260 EAALVYSRDRVQFGKPINEHQSIANLLADMQVQVNAARLLVLHAARLRSAGRPCLSEASQ 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ A +MA V + A++ GG GY+E+ + R+YR++ I GS Sbjct: 320 AKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYEGS 366 >gi|302550078|ref|ZP_07302420.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302467696|gb|EFL30789.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 390 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 45/265 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D AA+ ++ + D + ++G K W ++D ++A+ EG G F Sbjct: 133 LSEPHSGSDAAALRTKAVREGDD-WVINGTKAWITHGGIADFCTVMARTGEEGPRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-- 314 LVP G G+ + K+G + + T ++ F D+ VS +D +I Sbjct: 192 LVP-----GDAPGVSAAAPEKKMGMKGSPTAQVHFD--------DVRVS----DDRRIGE 234 Query: 315 --------LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 L LDS + ++ + +A EA+ YA +R G + D ++ +AD Sbjct: 235 EGQGFAIALSALDSGRLGIAACAIGVAQAALDEALAYAAQRRQFGKPIADFQGLRFMLAD 294 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I A AL A D + + +AA A K C A V +A++ +GG Sbjct: 295 MATQIEAGRALYLAAARLRDAGRPFARQAAMA-------KLHCTDTAMRVTTDAVQILGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY + R+ RE+ I+ G+ Sbjct: 348 YGYTADFPAERYMREAKVLQIVEGT 372 >gi|241554280|ref|YP_002979493.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863586|gb|ACS61248.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 375 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 20/258 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257 G LTE + G+D + + ++ ++ D Y + G K F++S + D I+ A + VG Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGDH-YVIDGSKQFITSGKNGDVIIVFAVTDLDVGKKG 178 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVE 310 + + G R++ K+G S+ T ++ F++ G ++ +E Sbjct: 179 ITAFIVQTDTPGYEVIRVEEKLGLHSSDTCQIAFNSMRIPAELRLGAEGEGYRIALANLE 238 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +I I A +V R + A YAR R G + + + +AD+A+ I AA Sbjct: 239 GGRIGI----AAQAVGMARAAFEAARDYARERTAFGKPIFEHQAVAFRLADMAVRIEAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L F A+ + EA+ A++ A +MA V ++A++ GG GY+ + + Sbjct: 295 QLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMADYPV 347 Query: 431 ARHYRESPANSILLGSGN 448 R YR+ I G+ + Sbjct: 348 ERIYRDVRICQIYEGTSD 365 >gi|314965935|gb|EFT10034.1| putative acyl-CoA dehydrogenase [Propionibacterium acnes HL082PA2] gi|327328790|gb|EGE70550.1| acyl-CoA dehydrogenase [Propionibacterium acnes HL103PA1] Length = 382 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 G L+E G+D AA+ + + D + L+G K W + + ++ A + Sbjct: 120 FGYALSEADAGSDPAALKCRADEDGDS-FVLNGVKAWVTEAGEAKYLVVFAVTDPDDPRH 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 + L+ G+ Y ++K+G R + T E+ F NT G L+V+ G + Sbjct: 179 RISALMVHADDPGISYGAPEHKMGIRGSVTREVVFKNTRIPKERVIGRRGHGLSVALGTL 238 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ ++ I A +V + +L A + ++R G L + ++ +AD+A+ + AA Sbjct: 239 DNSRVSI----AAQAVGIAQGALDIATDHVQKRKQFGQPLSNFEGIQFMLADMAMRLEAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL++ A D + ++++ +Y K + A AV +A++ +GG GY ++ + Sbjct: 295 RALTYSAA---DRSGRQTDDVSY---FGAAAKCFASDTAMAVCTDAVQLLGGIGYSKDSA 348 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 349 VERMFRDAKVTQIYEGT 365 >gi|118469937|ref|YP_889443.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118171224|gb|ABK72120.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 47/294 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W P I S E + I + +TE G+D+A I + + D + ++G Sbjct: 109 RRWLPGITSGE-------------LIIAIAMTEPGAGSDLAGIRTSAVRDGDD-WIINGS 154 Query: 232 KWFLSSPMS-DAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 K F+SS ++ D +++A+ + G F+V R +E G R +K+G S Sbjct: 155 KTFISSGINCDLCVVVARTDPEAGHKGFSLFVVERGME-----GFTRGRKLDKMGLHSQD 209 Query: 286 TVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 T EL F N LLG ++ P E + I AI +++G R E + Sbjct: 210 TSELHFENVRVPHANLLGKEGRGFYHLMTNLPSERLSI------AISAIAGARAVFDETL 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y + R G + + +A++ ++ R + + + EAA A Sbjct: 264 QYCKDRKAFGQPIGSFQHNRFLLAEMETELEVTENYIDRCLQGVVDGELTAVEAAKA--- 320 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W + A ++ ++ GG GY+ E +AR Y + +I G+ M Sbjct: 321 ----KWWATETAKKIVDNCVQLHGGYGYMMEYRVARAYVDGRIQTIFGGTTEIM 370 >gi|146307065|ref|YP_001187530.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145575266|gb|ABP84798.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 375 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + S+ LTE + G+D + + ++ ++ G Y LSG K F++S +++ V Sbjct: 111 PLAEGSMLGAFALTEPQAGSDASDLRTRARR-DGGHYVLSGAKQFITSGSHAGMVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G+ G F+VP G R+++K+G ++ T +++ LG Sbjct: 170 TDPGAGKKGISAFIVPT-----DTPGFSVVRVEDKLGQHASDTCQIQLDEVRIPAELRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A SV R + A YA R G +I+ + Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQSVGMARAAFEAARDYAHERVTFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A+ + EA+ A++ A +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+++ + R YR+ I G+ + Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSD 365 >gi|312139135|ref|YP_004006471.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311888474|emb|CBH47786.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length = 382 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 26/260 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA++++ + D Y L+G K F+S + SD ++++A+ + F Sbjct: 123 LTEPGAGSDAAALSTKAVRDGDD-YLLTGVKQFISGAGTSDVYVVMARTGAAGARGISAF 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP+ GL + + K+G + T ++ + N+ G E +I + Sbjct: 182 IVPK-----DTPGLSFGANEKKMGWNAQPTRQVILDQV---RVPAANLLGGEGEGFRIAM 233 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A SV G + +L +A+ Y R G L++ ++ +AD+ +++ AA Sbjct: 234 KGLNGGRLNIAACSVGGAQAALDKAVAYLAERKAFGAALVESQALQFRLADMRIELEAAR 293 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L +R A++ D + E + + K + V EA++ GG GY+ E + Sbjct: 294 TLLWRAADALDADSADKVE------LCAMAKRFATDTGFTVANEALQLHGGYGYLAEYGL 347 Query: 431 ARHYRESPANSILLGSGNAM 450 + R+ + IL G+ M Sbjct: 348 EKIVRDLRVHQILEGTNEIM 367 >gi|197105867|ref|YP_002131244.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196479287|gb|ACG78815.1| isovaleryl CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 382 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W ++P +D I+ A+ + + Sbjct: 125 LAMSEAGSGSDVVSMRLKAEKKGD-RYVLNGTKFWITNAPHADTLIVYAKTDPDAASRGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + ++G LN G + M L Sbjct: 184 TAFIIEKEFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPLNGGVGVL--MSGL 241 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A++S M+ + + Y R R G + +M+ IAD+ + + +A A Sbjct: 242 DY-ERAVLSAGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADMYVALNSARAY 300 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + +AA A +MA + A V EA++ +GG+GY E + R Sbjct: 301 VYAVAKACDAGMTTRFDAAGAILMA-------SENAVKVSLEAVQALGGAGYTREYPVER 353 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 354 FLRDAKLYDIGAGT 367 >gi|112983006|ref|NP_001037672.1| acyl-coenzyme A dehydrogenase [Bombyx mori] gi|103058047|gb|ABF71566.1| acyl-coenzyme A dehydrogenase [Bombyx mori] Length = 422 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 32/281 (11%) Query: 194 TSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR 252 T A LTE G+D A+ + +K + Y +SG K W +S ++ F+++ + Sbjct: 156 TEYAGSFCLTEPSSGSDAFALKTVAKKEGEH-YIISGSKMWISNSDVAGVFLVMTNADPS 214 Query: 253 VG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G CF+V R GL + +NK+G R++ T + F N +LG+ Sbjct: 215 KGYKGITCFIVER-----ETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEYGK 269 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 +L+ + ++ + L + I Y R G + + + I Sbjct: 270 GYKYAAG-----FLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQI 324 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A + + AA L++ A + +EAA A KY+ ++A + ++ ++ + Sbjct: 325 AHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMA-------KYFASEIAQTLTSKCIDFM 377 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GG G+ + + YR++ +I G+ N + + LLE+ Sbjct: 378 GGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLER 418 >gi|289743333|gb|ADD20414.1| short-chain acyl-CoA dehydrogenase [Glossina morsitans morsitans] Length = 416 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 32/275 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ FI+ A + G Sbjct: 156 FALTEPGSGSDAFSLKTVAKK--DGKDYVINGTKMWISNSDLAGLFIVFANAKPEDGYRG 213 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310 + L + + GL + ++K+G R++ T + F N G + G Sbjct: 214 ITTFLVERNTPGLTVNKPEDKLGIRASGTCMVTFEDVRIPEENLLGTFGHGYKYAAG--- 270 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 +L+ + ++ + LA+ I Y R G + + M+ IA +A + Sbjct: 271 ------FLNEGRVGIAAQMIGLAQGCFDHTIPYLMDRKQFGTEVYNFQSMQHQIAAVATE 324 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L++ A + +EAA A KY+ ++A + ++ +GG G+ Sbjct: 325 IEAARLLTYNAARMVEHGIPFVKEAAMA-------KYYASEVAQRATIKCIDWMGGVGFT 377 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++YR+ +I G+ N + + L++K Sbjct: 378 RDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKLIKK 412 >gi|170735328|ref|YP_001774442.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821366|gb|ACA95947.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 393 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 19/273 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL- 257 L +TE + G+D++ I + ++ +G Y L+G K W +S ++D ++ A+ G L Sbjct: 121 LSITEAQSGSDVSGIRTTARR-KNGGYVLNGSKIWCTNSHIADFILVAAKTLDEQGQPLG 179 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 + + D GL ++K+G R + L F + F+ D + + K+ + Sbjct: 180 INLFIVDRHTPGLTIGNEEDKMGARGVPSCPLYFDDA--FIRADDRLGPEGSQGFKVAME 237 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+++ V+ V +A+ A+ + + R G + D ++ IAD+ AA Sbjct: 238 ALNTSRPIVAARAVGIAQGAIDHAVKFIQDRVAFGQAISDFQGVRWMIADMVTQTEAARQ 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L +R A+ D S E A MA + K + +A V +A++ G +G E I Sbjct: 298 LVYRTASLVDAGVSGRELAP----MAAMAKMFASDVAMKVATDAVQLFGAAGISNEYPIN 353 Query: 432 RHYRESPANSILLGSG----NAMVLDVLNLLEK 460 R++R++ I+ G+ N + +VL + K Sbjct: 354 RYFRDAKVVQIIEGTNQIQRNIVADNVLGRIRK 386 >gi|77459090|ref|YP_348596.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77383093|gb|ABA74606.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 383 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 30/280 (10%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S E T A + +V LTE + G++ + ++ + + DG + ++G K F+S+ Sbjct: 104 SEEQKQTWLADLASGAVIGCFCLTEPQAGSEAHNLRTRAE-LRDGQWVINGAKQFVSNGK 162 Query: 240 SDAFIMLAQVE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 ++ V G+ G FLVP + G R ++K+G R++ T + +N Sbjct: 163 RAKLAIVFAVTDPDLGKRGISAFLVPTDMP-----GFIVDRTEHKMGIRASDTCAVTLNN 217 Query: 294 TF---GFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 LLG+ L ++ +E +I I A ++ R + A+ YAR R G Sbjct: 218 CSIPEANLLGERGKGLAIALSNLEGGRIGI----AAQALGIARAAFEAALGYARDRVQFG 273 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 +++ + +AD+ + I AA + A K EA+ A++ A + Sbjct: 274 KAIVEHQSIANLLADMQMQINAARLMILHAARLRTAGKPCLSEASQAKLFAS-------E 326 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 MA V + A++ GG GY+E+ + ++YR++ I GS Sbjct: 327 MAEKVCSSAIQIHGGYGYLEDYPVEKYYRDARITQIYEGS 366 >gi|18313372|ref|NP_560039.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] gi|18160902|gb|AAL64221.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] Length = 378 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/303 (22%), Positives = 135/303 (44%), Gaps = 46/303 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T R+ ++ PK+ + E V + L+E G+D AAI ++ +KI G + Sbjct: 99 TKRMKEEILPKVAAGE-------------VIVAFALSEPCCGSDAAAIRTRAEKIG-GEW 144 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQ---VEGR---VGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++GHK W S +D +++ A+ +E R + FL+PR C + ++ Sbjct: 145 VINGHKMWITSGLYADYYLLFARTGPLEARHKAITAFLIPR--------SNCVEATPIEV 196 Query: 280 -GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAE--- 334 G R T E++F++ GD +V + ++ ++ ++V + + +AE Sbjct: 197 MGVRGTGTAEVKFNSCKA---GDEDVVGEVNGGWSVAMWGINMGRLNVGAIGLGIAEEAF 253 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 A YA +R G ++ D ++ +A++ + A AL ++ A K R E Sbjct: 254 YQAYDYAHKREAFGRLIADFQAIQHYLAEMYARVEALRALVYKTA------KMRDENHPD 307 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + A + K + A A++ +GG GY + + YR++ I G+ N ++L Sbjct: 308 FPLYAQVAKLMGSRTAVETARLAVQILGGYGYSTDSHVEMLYRDAKVTEIYEGT-NEIIL 366 Query: 453 DVL 455 + + Sbjct: 367 NTI 369 >gi|215404688|ref|ZP_03416869.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987] gi|215412529|ref|ZP_03421263.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 94_M4241A] gi|215446976|ref|ZP_03433728.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85] gi|289746526|ref|ZP_06505904.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987] gi|289758852|ref|ZP_06518230.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85] gi|294994186|ref|ZP_06799877.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 210] gi|298526193|ref|ZP_07013602.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|289687054|gb|EFD54542.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis 02_1987] gi|289714416|gb|EFD78428.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis T85] gi|298495987|gb|EFI31281.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|326904339|gb|EGE51272.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis W-148] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGITTRAVKHGDH-YMLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|172039877|ref|YP_001799591.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109] gi|171851181|emb|CAQ04157.1| acyl-CoA dehydrogenase [Corynebacterium urealyticum DSM 7109] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 48/331 (14%) Query: 132 AHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPM 191 A I A L A+L +MSP + S++ + +++ PKI + + Sbjct: 65 ALSIVAEELARQARLPVLLVMSPGIV-GSILLHGGSAEQKEEFLPKIAAGDL-------- 115 Query: 192 QKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV- 249 K + AI TE G++ I++ + DG Y L+G K F+S + + +++A++ Sbjct: 116 -KCAFAI----TEPDAGSNTHRISTSLTPLGDGKYSLTGTKCFISGADEAQMILVVAKIK 170 Query: 250 ----EGRVGCFLVPRLLEDGSPNGLCYQRLKN-KIGNRSN-----ATVELEFSNTFGFLL 299 + ++GC LVP E GL +++ K + S VE++ S+ G + Sbjct: 171 PDGEDAKLGCCLVPCDTE-----GLTMSKIETEKFSDDSQWLLSFDRVEVDQSSVIGGIS 225 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 L + +IL+ +A + +R +L A+ YA R V G + + + Sbjct: 226 SGLKALFHGLNPERILM---AAFCNGIALR-ALDLAVAYAESREVWGAPISTHQAISHPL 281 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ +DI A ++FR A+ FD A Y +K+ + A + A++ Sbjct: 282 AEVKIDIELARNMTFRAASDFDSGGDCGASANY-------SKFAAARAAVKSVDRAIQTH 334 Query: 420 GGSGYIEERSI------ARHYRESPANSILL 444 GG+G++++ + AR +R +P + ++ Sbjct: 335 GGNGFVKDYRVSELFWPARLFRTAPVSEEMI 365 >gi|114769691|ref|ZP_01447301.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255] gi|114549396|gb|EAU52278.1| Acyl-CoA dehydrogenase [alpha proteobacterium HTCC2255] Length = 404 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%) Query: 186 TNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243 T P T +G GLTE G+D + ++ ++I DG Y +SG K W +SP++D F Sbjct: 131 TKYLPKLATGELVGCFGLTEPDHGSDPGGMLTRAKQI-DGGYLISGAKNWITNSPIADVF 189 Query: 244 IMLAQVEG---RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297 I+ A+ + ++ F++ R ++ GL +++ K R++ T ++ F Sbjct: 190 IIWAKSDAHDNKIKGFILERGMK-----GLESPKIEGKFSLRASTTGMIQMDEVFVPEEN 244 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 +L +++ GP + Y A ++ A Y R G L ++++ Sbjct: 245 ILPNISGLAGPFGCLNRARY-GIAWGTMGAAEFCWHAARQYTMDRKQFGRPLAQTQLIQK 303 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ +I+ R+ FDE K +E + + K C A + A + Sbjct: 304 KLADMQTEISLGLQGCLRMGRLFDEHKVPAE-------LISLMKRNNCGKALDIARTARD 356 Query: 418 CIGGSGYIEERSIARH 433 GG+G +E S+ RH Sbjct: 357 MHGGNGVSDEYSVIRH 372 >gi|260575697|ref|ZP_05843694.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] gi|259022095|gb|EEW25394.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sp. SW2] Length = 379 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 P ++G LTE G+D A + S+ + G Y L G K F+S+ ++D ++ A Sbjct: 113 PAAAAGTSLGAFALTEPNAGSDPADMRSRATRTPQG-YHLKGRKCFISNGGVADFVVVYA 171 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + + D G R + +G R EL+F +G Sbjct: 172 VTDPAAGHRGISAFVVDKGTPGFTPGRAEQTMGLRGGHVWELDFDCHLPETQRLGQEGSG 231 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 MK+L D+ + V+ M + +A+ A +A+ R + G L D+ ++ +AD+ Sbjct: 232 FKTAMKVL---DAGRVEVAAMCIGIAQQALDLATQWAKTRIIGGAPLADRQGIRWQLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ALD+ +A L + + A+ R ++ + A + K +MA V A++ GG Sbjct: 289 ALDLQSARLL------ALEAARQRQNHERFS-LAASMAKLHASEMAHRVTDAALQLHGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY + + R R+ I GS Sbjct: 342 GYTRDFPLERLARDVRIMRIYEGS 365 >gi|257455371|ref|ZP_05620606.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60] gi|257447333|gb|EEV22341.1| isobutyryl-coa dehydrogenase [Enhydrobacter aerosaccus SK60] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 17/267 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ ++ K D Y ++G K F+S + +D +++A+ G V Sbjct: 124 LTEPNAGSDAGSLKTKAVKQGD-YYHITGQKMFISGAGATDVLVVMARTSDN-GAKGVSA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + D + +G+ Y + ++K+G ++ T + F++ LLG+ G MK L Sbjct: 182 FIVDANSDGISYGKNEHKMGWKNQPTAAVHFTDVKVPAENLLGE--EGQGFTFAMKGLDG 239 Query: 317 -YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ A +V + +L A+ Y + R G L ++ +AD+ + +A + R Sbjct: 240 GRINIATCAVGTAQAALDRAVQYVQERSQFGKTLDQFQNVQFKLADMLTHLVSARQM-VR 298 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 LA ++KS A A + K ++ + +A++ GG GY++E + RH R Sbjct: 299 LAAYHLDSKSPDATAYCA-----MAKRLATDLSFDIANQALQLHGGYGYLQEYPLERHVR 353 Query: 436 ESPANSILLGSGNAMVLDV-LNLLEKG 461 + + IL G+ M + V ++E G Sbjct: 354 DLRVHQILEGTNEVMRMIVSRKMMEDG 380 >gi|189466830|ref|ZP_03015615.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM 17393] gi|189435094|gb|EDV04079.1| hypothetical protein BACINT_03206 [Bacteroides intestinalis DSM 17393] Length = 568 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKREGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFNKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ Y+++ P+ K + A Sbjct: 347 ALLYQTSRYVDVYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|144898578|emb|CAM75442.1| Butyryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +I ++ + D Y L+G K F++S ++ F + G+ G Sbjct: 123 LTEPEAGSDAGSIKTRAVRDGD-FYVLNGTKQFITSGRNAKVAIVFAVTDPSAGKKGLSA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGP 308 F+VP SP G R+++K+G ++ T ++ N G L ++ Sbjct: 182 FIVP----TDSP-GWVVARVEDKLGQHASDTCQIILEDLRIPAENRLGAEGEGLKIALAN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E ++ I A SV +L A+ YA+ R G +I+ + +AD+A + A Sbjct: 237 LEGGRLGI----AAQSVGMASAALDHALRYAQERKQFGKAIIEHQAVAFRLADMATRLEA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L +A D +EA+ A+++A T C ++A++ GG GY+ + Sbjct: 293 ARHLVLHVATLRDAGLPCLKEASMAKLLASETAEKVC-------SDAIQIHGGYGYLADF 345 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLL 458 + R YR+ I G+ + L + L Sbjct: 346 PVERIYRDVRVCQIYEGTSDIQRLVIARAL 375 >gi|118618686|ref|YP_907018.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99] gi|118570796|gb|ABL05547.1| acyl-CoA dehydrogenase FadE20 [Mycobacterium ulcerans Agy99] Length = 386 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 40/269 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ K D Y L+G K F+++ + +D I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGIKTRAVKQGDH-YLLNGSKTFITNGINADLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL FS+ F +L+ +L Sbjct: 189 SLLVVERGMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + Y + R G + + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSRFVLAELAT 297 Query: 365 DIAAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + AT + + S + + K +E+AA A K++ + ++ ++ GG Sbjct: 298 E---ATMVRIMVDESIELHLDGKLTAEQAAMA-------KWYSTEKQVSLNDRCLQLHGG 347 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E +AR Y +S +I G+ M Sbjct: 348 YGYMREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|83309776|ref|YP_420040.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82944617|dbj|BAE49481.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 389 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 41/303 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G K Sbjct: 117 YLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGD-RYVLNGTK 161 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + P +D ++ A+ + G + L + + G + +K+G R + T EL F Sbjct: 162 MWITNGPDADVIVVYAKTDVTAGPRGITAFLVEKTFKGFSVAQKLDKLGMRGSNTGELVF 221 Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 N G + +NV ++ +++ L + + M + + Y R Sbjct: 222 QDCEVPEENVLGAVGKGVNVLMSGLDYERVV--LTGGPLGI--MAACMDVVVPYVHERTQ 277 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + +M+ +AD+ A A ++ +A + D ++ ++AA + W Sbjct: 278 FGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGETSRKDAAGVILYGAEKATW- 336 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + EA++ +GG+GYI E + R R++ I G+G + + +L G L Sbjct: 337 ------MALEAIQTLGGNGYINEYATGRLLRDAKLYEI--GAGTSEIRRML----IGREL 384 Query: 465 FEQ 467 FE+ Sbjct: 385 FEE 387 >gi|313246358|emb|CBY35274.1| unnamed protein product [Oikopleura dioica] Length = 560 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 31/271 (11%) Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251 L +TE G+D+ ++ T+ Q Y L+G+K W + P+ D I A+ + Sbjct: 295 LSMTEPTAGSDVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGD 354 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTG 307 + F+V D G + K+G R + T +L F N LLG+ + Sbjct: 355 SITAFIV-----DTDTEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFV 409 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + I L +A M V M+ + ++ YA R G + +M+ +A++ ++ Sbjct: 410 LMRGLNIERLLGAA-MPVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLS 468 Query: 368 AATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A A ++ + S D EA S E A+ ++ C K+A E ++ +GG+GY Sbjct: 469 ACRAYTYSMLRSADQDPEAMSNHECASLIMFVSD----ACTKVA----LEGIQILGGNGY 520 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455 + + + R+ R+ A + +G+G V V+ Sbjct: 521 VNDYPVNRYMRD--AKLMEIGAGTTEVRKVI 549 >gi|304438947|ref|ZP_07398870.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372613|gb|EFM26196.1| butyryl-CoA dehydrogenase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 380 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 34/270 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254 GLTE GTD A Q + DG Y L+G K F+++ +D FI++A + G Sbjct: 123 FGLTEPGAGTDAAG--QQTIAVLDGDHYILNGTKIFITNAGFADVFIIIAMTDKSQGTKG 180 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 F+V R E G ++K+G R+++T EL F N LLG G Sbjct: 181 ISAFIVERGFE-----GFRVGEPEDKMGIRASSTCELIFENCKVPKENLLGREGKGFGLA 235 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK L D + ++ V +AE I Y + R G + + +AD+ Sbjct: 236 --MKTL---DGGRIGIASQAVGIAEGAIDETIKYTKERKQFGRRISQFQNTQFQLADMKT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA L +R A++ S AA A++ A T A V ++ GG GY Sbjct: 291 KAEAAQLLVYRAADAKQNKIPYSHYAAMAKLFASET-------ASDVTRRCLQLFGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454 ++ I R R++ I G+ M + V Sbjct: 344 TKDYPIERMMRDAKITEIYEGTSEVMRMVV 373 >gi|313125944|ref|YP_004036214.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312292309|gb|ADQ66769.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 381 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 L+E G++ A +++ ++ D Y ++G K W + D I+ A+ + V Sbjct: 127 FALSEPDAGSNPAEMSTVARREGDE-YVINGKKQWITNGQRGDVCILFAKTDPDDPSSVT 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP+ G+ + ++K+G R++ T L F + + E+ K Sbjct: 186 QFLVPK------DAGIEVGKKEHKLGLRASDTTSLIFDDVH------IPAENRLTEEGKG 233 Query: 315 LI----YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 L L M ++ V LA EA YA R GG + D ++ +++A Sbjct: 234 LSAAFRILTGGRMGIAAQAVGLAQSAFDEAREYAHDREQFGGPISDIQAVRHKFSEMATQ 293 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A+ L R A D+A RI A + KY+ + A V EA++ GG GY Sbjct: 294 IHASR-LMVREAARQDDAGEDP------RIAASMAKYFASEAAVDVTNEAVQIHGGYGYT 346 Query: 426 EERSIARHYRESPANSILLGS 446 + + R YR+S +I G+ Sbjct: 347 TDFEVERMYRDSKITTIYEGT 367 >gi|255945095|ref|XP_002563315.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588050|emb|CAP86121.1| Pc20g07920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 425 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 + K ++A GLTE G+D ++ + ++ G+Y LSG K W +SP++D ++ A Sbjct: 152 LAKGTLAGCFGLTEPNHGSDPGSMETVAREHPTQKGMYLLSGSKTWITNSPIADVALVWA 211 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 ++E G++ F+V R E +P +KNK R++ T ++ N +L ++ Sbjct: 212 KLESTGKIRGFIVER--ERATPGSYETPAIKNKSALRASITGMIQMDNCPVPAENMLPEV 269 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361 GP + L A ++ + LA A Y+ R+ G L +++ +A+ Sbjct: 270 EGLKGPFTCLNS-ARLGIAFGAMGALEDCLARAREYSLERKQFKGNPLAKYQLIQMKLAN 328 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A D A T + ++A D K+ E M + K C A A E GG Sbjct: 329 AATDAAYGTLAAVQVARLKDAGKATPE-------MISMIKRQNCDRALANSRILQEVFGG 381 Query: 422 SGYIEERSIARH 433 + +E IARH Sbjct: 382 NAASDEYHIARH 393 >gi|319761248|ref|YP_004125185.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317115809|gb|ADU98297.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 416 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 32/287 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250 L+E G+D+A+I+ + + + D + L+G+K W + +D + A+ E Sbjct: 131 LSEPDTGSDLASISCRAELVGDE-WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWE 189 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CFL+ + + P G+ Q + KIG T EL ++ + N+ P + Sbjct: 190 G-ISCFLIEKKRGE-FPPGMVGQPIP-KIGYFGWKTFELALND---LRVPRENLIGAPGQ 243 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I+ L++A + + LA+ AI YAR R G + + ++ IA +A Sbjct: 244 AFLIMAKGLETARAHTAARAIGLAQGALEDAIAYARERKQFGMPIAEHQAIRFKIATMAT 303 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA L + ++ D + EA+ ++ A +MA V +EA++ GG+GY Sbjct: 304 EVEAARQLLHYVCSAIDSGRRCDTEASMVKLFA-------TEMAERVTSEALQIFGGAGY 356 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFST 471 + ++ RH+R++ I G+ + N L G ++ E + ++ Sbjct: 357 TKLFAVERHWRDARLTKIFEGTSEIQQRIIANNL-LGKSVLEDMIAS 402 >gi|294677047|ref|YP_003577662.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294475867|gb|ADE85255.1| isovaleryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/268 (21%), Positives = 124/268 (46%), Gaps = 17/268 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + ++ D +Y L+GHK W + +D ++ A+ + G + Sbjct: 128 LAMSESGAGSDVVGMKLRAERRGD-VYVLNGHKYWITNGCDADTLVVYAKTDPAAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G +K+G R + T +L F + L + V + + Sbjct: 187 TAFIVERGMKGFSSSAHFDKLGMRGSNTAQLFFDDCEVPAENVLGLEGKGVRVLMSGLDY 246 Query: 319 DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++S G + +A E + YAR R G + +M+ IAD+ + A A ++ Sbjct: 247 ERVVLSGIGTGILMACLDEVLPYARTREQFGQPIGSFQLMQAKIADMYVAANTARAYTYE 306 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A + D + ++AA T + + A +A++ +GG+G++ + +++R +R Sbjct: 307 VAKACDRGEVTRQDAA-------ATVLYASEQAMVQAHQAVQALGGAGFLNDSTVSRLFR 359 Query: 436 ESPANSILLGSGNAMVLDVL---NLLEK 460 + A + +G+G + + +L L+EK Sbjct: 360 D--AKLMEIGAGTSEIRRMLIGRELMEK 385 >gi|289645095|ref|ZP_06477122.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] gi|289505092|gb|EFD26164.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] Length = 382 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 38/269 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQV-----EGR 252 +G+TE G+D+A + + + DG Y L+G K F+S ++D +++A+ + R Sbjct: 124 IGMTEPGAGSDLAGVRTTA--VRDGEHYVLNGAKTFISGGALADLVVVVARTSRSESDRR 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 G L+ ++EDG P +++ +N KIG + T+EL F++ LLG+ + Sbjct: 182 RGLSLL--VVEDGMPG---FEKGRNLAKIGLKVQDTIELSFTDVRVPVENLLGEEGAAFE 236 Query: 308 ------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 P E + I I +A + V+ Y R RHV G + + +A Sbjct: 237 QLTHGLPQERLSIAISSLAAARAALDTTVT------YVRERHVFGKPVSYFQNTRFELAA 290 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +I AA A+ D A + + + A K +C ++ + ++ GG Sbjct: 291 VATEIEAAQAM-------VDRALAEHVAGELSPVDAAKVKLYCTELQGRTVDRCLQLFGG 343 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GYI E IAR Y ++ I G+ M Sbjct: 344 YGYILEYPIARLYADARVTRIYGGTSEIM 372 >gi|238506004|ref|XP_002384204.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220690318|gb|EED46668.1| glutaryl-CoA dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 531 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 43/249 (17%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 + K +A GLTE G+D ++ + ++ G Y LSG K W +SP+SD I+ A Sbjct: 158 LAKGKIAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYSLSGTKTWITNSPISDILIVWA 217 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 ++E G++ F+V R + P L +KNK A + G G + Sbjct: 218 KLESTGKIRGFVVER--DQCPPGTLETPAIKNK-----TALTGVYHRARLGIAFGAM--- 267 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIADIAL 364 G +ED L+ A YA R+ G L ++++ +AD A Sbjct: 268 -GALEDC-------------------LSRARTYALERKQFKGNPLAKYQLIQKKLADAAT 307 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D A T + ++A DE KS E M + K C A A E GG+ Sbjct: 308 DAAYGTLAATQVARLKDEGKSTPE-------MISMIKRQNCDRALANSRILQEVFGGNAT 360 Query: 425 IEERSIARH 433 +E I RH Sbjct: 361 SDEYHIGRH 369 >gi|325183020|emb|CCA17474.1| isovalerylCoA dehydrogenase putative [Albugo laibachii Nc14] Length = 422 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 122/257 (47%), Gaps = 28/257 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLS------SPMSDAFIMLAQVEG 251 G+G++E GTD+ + + + G+Y L+G K +++ + + D F++ A+ G Sbjct: 150 GMGMSEPSVGTDVLGMNTSARLSRCGMYYLLNGSKMWITNGALNDTELGDYFLVYARTGG 209 Query: 252 ------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG-D 301 + CF+V + + S QR+KNK G R++ T EL F + L+G + Sbjct: 210 SSTSKKNISCFIVEKGFQGFSLG----QRIKNKCGMRASNTAELVFEDCKIPIENLIGKE 265 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 + + ++KI + A MS+ R SL YA+ R G L ++++I++ Sbjct: 266 GDAVLCMMRNLKIE-RVTLAAMSLGIARRSLQIMNDYAKERQAFGQSLNTFGQIQKSISE 324 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + A + ++ A++ + ++A + K +C MA + A++ +GG Sbjct: 325 SYAEFMAGRSYVYQ------AARNLALDSADFDVDCDGVKLYCGVMAKRIADRAIQTLGG 378 Query: 422 SGYIEERSIARHYRESP 438 +GYI + + R +R++ Sbjct: 379 NGYIGDYVVERLWRDAK 395 >gi|156042750|ref|XP_001587932.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980] gi|154695559|gb|EDN95297.1| hypothetical protein SS1G_11174 [Sclerotinia sclerotiorum 1980 UF-70] Length = 428 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 37/252 (14%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ T++ G Y +SG K W +SP++D F++ A+++ G++ Sbjct: 164 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIK 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307 F++ R D P L LKNK G R++ T ++ +N F + G G Sbjct: 224 GFIIDR--ADCPPGTLETPALKNKNGLRASLTGMIQLDECPVPEANMFQTVEG----LRG 277 Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361 P L+SA ++ GM +L + I AR R+ G L ++++ +AD Sbjct: 278 P------FTCLNSARYGIAWGMTGALEDCIDRARTYALERKQFKGNPLAKYQLVQKKLAD 331 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 D A T ++ D+ ++ E M + K C A E GG Sbjct: 332 AVSDAAFGTLACVQVGRLKDKGEAAPE-------MISMIKRQNCDAALRNARTLQEIFGG 384 Query: 422 SGYIEERSIARH 433 + +E I RH Sbjct: 385 NAASDEYGIGRH 396 >gi|150024452|ref|YP_001295278.1| glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86] gi|149770993|emb|CAL42460.1| Glutaryl-CoA dehydrogenase [Flavobacterium psychrophilum JIP02/86] Length = 392 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 40/260 (15%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ + + + D Y L+G K W ++P +D ++ A Sbjct: 125 PKLATGEFIGCFGLTEPNYGSDPGSMITNYKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303 + EGR+ +V R +E G NK R++AT EL F N LL + + Sbjct: 184 KNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKANLLPNKS 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPV---- 354 P L LDSA ++ + A A+ YA+ R I D+P+ Sbjct: 239 GLGAP------LGCLDSARYGIAWGAIGAAMDCYDTALRYAKER-----IQFDKPIAGTQ 287 Query: 355 -MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +A++ +I A L++RL +E ++ + + + A K MA + Sbjct: 288 LQQKKLAEMITEITKAQLLTWRLGVLRNEGRATTAQISMA-------KRNNVDMAINIAR 340 Query: 414 EAMECIGGSGYIEERSIARH 433 EA + +GG G E SI RH Sbjct: 341 EARQILGGMGITGEYSIMRH 360 >gi|313106647|ref|ZP_07792869.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310879371|gb|EFQ37965.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 384 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 32/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + + G Y L+G K F++ +P + + ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTAMR-DGGHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 183 AFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 237 MKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAEA 293 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 294 YAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYIG 346 Query: 427 ERSIARHYRE 436 + I R YR+ Sbjct: 347 DYGIERFYRD 356 >gi|91214963|ref|ZP_01251935.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC 700755] gi|91186568|gb|EAS72939.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC 700755] Length = 392 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 42/305 (13%) Query: 142 LMAQLEAGH--LMSPSVTSASMVAL----MTTPRVHKDWAPKIFSREYDPTNKAPMQKTS 195 +M ++E G + S + +S+V T K + PK+ S E+ + Sbjct: 85 IMQEIERGDSGVRSTASVQSSLVMFPIYEFGTEEQRKKFLPKLASGEFMGS--------- 135 Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRV 253 GLTE G++ + +T+ D Y L+G K W +SP D ++ A+ EGR+ Sbjct: 136 ----FGLTEPDHGSNPSGMTTHFVDKGDH-YLLNGAKMWISNSPFCDIAVVWAKNEEGRI 190 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 +V R +E G NK R++AT EL F + + N+ G Sbjct: 191 HGLIVERGME-----GFSTPETHNKWSLRASATGELIFQDV---KVPKENLLPGKSGLGA 242 Query: 314 ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LDSA ++ + A A+ YA+ R G + + ++ +A++ +I Sbjct: 243 PLLCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAGYQLQQKKLAEMITEITK 302 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+ RL +E K+ + + + A K +MA + E+ + +GG G E Sbjct: 303 AQLLALRLGQLKNEGKASTAQISMA-------KRNNVEMAIHIARESRQILGGMGITGEY 355 Query: 429 SIARH 433 SI RH Sbjct: 356 SIMRH 360 >gi|114565939|ref|YP_753093.1| hypothetical protein Swol_0384 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336874|gb|ABI67722.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 612 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 62/361 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSD-----AFIMLAQVEGR--- 252 LTE G+D+ I S+ D I+ + G+K F+++ +D + LA++EG Sbjct: 167 LTEPSAGSDVGDILSKAYPTDDPRIFKIKGNKIFITAGDNDFTENIIHLYLARIEGARPG 226 Query: 253 ---VGCFLVPRLL--EDGSPNGLCYQR--LKNKIGNRSNATVEL---EFSNTFGFLLG-D 301 + F+VP+ EDGS + +Q +++K+G + T L E G+LLG D Sbjct: 227 TGGISLFVVPKYWVNEDGSLSDNDFQTTGVEHKMGQAGSVTAALAAGENDGCRGWLLGND 286 Query: 302 LNVSTGPVEDM-KILIYLDSAIMSVSGMRVS-LAEAIHYAR---RRHVSGGIL------- 349 G + M ++ ++ A M M +S + A AR + V G +L Sbjct: 287 PREHEGKGQGMAQMFQMMNLARMETGHMALSCIINAFCNARDNAKERVQGRLLTNPKAGR 346 Query: 350 ---IDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPIT 400 I+ +KR + I A A+ +R+ +FD+ + R + I P+ Sbjct: 347 VAIINHEDIKRTLLMGKAHIEAMRAMLYRVYLAFDQRERDPDPEVRKAASDLIEITTPLC 406 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL--NLL 458 K + +I+EA++ GG GY EE +A+ R+ SI G+ +D++ + Sbjct: 407 KAYPSDEGWWLISEAIQSYGGYGYCEEYPVAQIARDMKIYSIWEGTNYIQSMDLVGRKMQ 466 Query: 459 EKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALY 518 KG +LF +++ + C+ +KG A L+++ A+ A Y Sbjct: 467 MKGGSLFGAW------------------VKEMVDFCEANKGNAA-LSKEFAILDKALKAY 507 Query: 519 R 519 + Sbjct: 508 Q 508 >gi|254419831|ref|ZP_05033555.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196186008|gb|EDX80984.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 384 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 49/302 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 T + W P + S E V + +TE G+D+ AI + I DG Sbjct: 110 TEEQKRRWLPGMVSGE-------------VITAIAMTEPGAGSDLQAIKTTA--IRDGDE 154 Query: 226 YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y + G K ++++ + D I+ A+ + G V +L + G R +KIG R+ Sbjct: 155 YVIQGSKTYITNGQTADLIIVAAKTDPAAGAKGVSLILVEADRVGFARGRKLDKIGQRAA 214 Query: 285 ATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 T E+ F+ F L+ +L P E ++I A+ + +G + Sbjct: 215 DTSEMFFNEVRVPVSNLIGEEGRGFSMLMNNL-----PQERLQI------AVKAQAGAQR 263 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 + EA+ Y + R G + D +AD+ + A A D R Sbjct: 264 AFDEAVKYTKERPAFGKTVFDFQNTSFQLADLKSKLQAGWA-------HIDWCVERHIGG 316 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K + ++ AV A++ GG+GY+ E IAR +R++ I G+ M Sbjct: 317 RLDAAQASAAKLFHTELQWAVCDAALQMHGGAGYMNETPIARLWRDARVQRIYGGTSEIM 376 Query: 451 VL 452 L Sbjct: 377 KL 378 >gi|184159533|ref|YP_001847872.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|183211127|gb|ACC58525.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|322509443|gb|ADX04897.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323519464|gb|ADX93845.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii TCDC-AB0715] Length = 387 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 12/257 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A + K + E + + K + A++ +GG G++ R Sbjct: 304 EETAWKMTQPKLQGPELV---VQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI 360 Query: 434 YRESPANSILLGSGNAM 450 YRE N I G+ M Sbjct: 361 YREVKVNMIGGGAEEIM 377 >gi|108757129|ref|YP_631256.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] gi|108461009|gb|ABF86194.1| acyl-CoA dehydrogenase [Myxococcus xanthus DK 1622] Length = 383 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 20/272 (7%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA- 247 AP + LG+TE G+D+A + + ++ D Y L+G K ++++ + F++LA Sbjct: 116 APAIRGEKIGALGITEPDAGSDVAGLRTTARREGDS-YVLNGSKTYITNGVRADFVVLAV 174 Query: 248 ---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 G G +V ++E G+P G R +K+G R++ T EL F + L V Sbjct: 175 KTDPSAGHKGLSMV--VVEKGTP-GFSVGRKLDKLGWRASDTAELFFEDCRVPAENLLGV 231 Query: 305 -STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + M + L A+ +V M L + + R G L V++ +A+ Sbjct: 232 EGQGFAQIMGNFQWERLSLALGAVGAMEDMLETVLAQVKSRRAFGQSLHQFQVVRHKLAE 291 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + +A L++ + + + A+ +A T CC++A E ++ GG Sbjct: 292 LFTARESARQLTYHALRLHVAGEWAVAQTSMAKKVATET---CCRVAD----ECLQLHGG 344 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLD 453 +GY+ E I RH+R++ I G G + V++ Sbjct: 345 AGYMMEYDIQRHWRDARLGPI--GGGTSEVMN 374 >gi|148553574|ref|YP_001261156.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148498764|gb|ABQ67018.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 22/258 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y +SG K F+S + ++ G G + L Sbjct: 126 LTEPGSGSDAAALKTRAVRDGDD-YVVSGSKAFISGGGENEVYVVMVRTGEDGPKGISCL 184 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDS 320 + D G+ + + K+G S T ++ F G + N G E +I ++ LD Sbjct: 185 VIDKDMPGVSFGAQEKKLGWHSQPTAQVNFD---GVRVPVANRVGGEGEGFRIAMMGLDG 241 Query: 321 AIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + S+ G + L E++ Y R R G + D ++ +AD+ ++ AA L + Sbjct: 242 GRLNIGACSLGGAQRCLDESVSYTRERKQFGQPIADFQSIQFTLADMETELQAARMLLYA 301 Query: 376 LANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K+R A + K + AV+ A++ GG GY+ + I R Sbjct: 302 AAAKVTANAPDKTR---------FAAMAKRFATDTGSAVVDRALQLHGGYGYLRDYPIER 352 Query: 433 HYRESPANSILLGSGNAM 450 +R+ + IL G+ M Sbjct: 353 FWRDLRVHRILEGTNEIM 370 >gi|28210432|ref|NP_781376.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88] gi|28202869|gb|AAO35313.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K GLTE GTD A S + D Y L+G K F+++ ++D ++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDAAGQQSVAIDMGDH-YLLNGSKIFITNGGVADVAVVFAM 171 Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + +LE G P G ++++K+G R+++T EL F D+ V Sbjct: 172 TDRSKGTRGISAFILEKGMP-GFSVGKVEDKMGIRASSTTELIFE--------DVKV--- 219 Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353 P E++ K A+ ++ G R+ +A EAI Y + R G L Sbjct: 220 PKENLIGKEGRGFGIAMKTLDGGRIGIASQALGIAEGALEEAITYMKERKQFGRELYKFQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+ + I +A L ++ A SEEAA A++ A +A V Sbjct: 280 GLSWMMADMKVAIESARLLVYQAAWKKQNKLPYSEEAAMAKLHA-------ANVAMDVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG GY ++ + R R++ I G+ Sbjct: 333 KVVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365 >gi|167847060|ref|ZP_02472568.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|254194820|ref|ZP_04901250.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|169651569|gb|EDS84262.1| putative glutaryl-CoA dehydrogenase [Burkholderia pseudomallei S13] Length = 395 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 25/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F + P T IG GLTE G+D ++ ++ +K+ G Y LSG K W + Sbjct: 114 FGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVLGG-YSLSGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 +P++D F++ A+++ + +LE G GL + K+G R++ T E+ F Sbjct: 173 APIADVFVVWAKLDEDGRDEIRGFILEKGC-KGLSAPAIHGKVGLRASITGEIVLDEAFV 231 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGI 348 +L + GP L+SA ++ + AE+ + R++V G Sbjct: 232 PEENILPHVKGLRGP------FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP 285 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +I RL DE + E + I K C A Sbjct: 286 LAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVE-------ITSIMKRNSCGKA 338 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 339 LDIARLARDMLGGNGISDEFGVARH 363 >gi|330502940|ref|YP_004379809.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328917226|gb|AEB58057.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 385 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 20/267 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ +K+G RS+ T ++ F N + +G G M++L Sbjct: 182 SLIVVPMKTPGVSVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIG----HEGAGFMMQML 237 Query: 316 IYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + + + G+ + I Y ++RH G LID V+ +A++ +I A A Sbjct: 238 QFQEERLFGAANMIKGLEHCVDTTIDYCKQRHTFGQPLIDNQVIHFRMAELQTEIEALRA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ + + + ++ A+ A++ A ++ V ++ GG G++ + ++ Sbjct: 298 LVYQATEQYVKGRDVTKLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVS 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458 R YR+ SI G+ M+ + L+ Sbjct: 351 RAYRDVRLVSIGGGADEIMLGIICKLM 377 >gi|255036761|ref|YP_003087382.1| acyl-CoA dehydrogenase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949517|gb|ACT94217.1| acyl-CoA dehydrogenase domain protein [Dyadobacter fermentans DSM 18053] Length = 388 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 22/255 (8%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-CFLVP 259 GLTE G+D + + + D + ++G K F+++ S +++ G G Sbjct: 132 GLTEPNTGSDAGNMRTVAVRDGDD-WVINGSKNFITNGKSADVLVVMTRTGEPGDKHGAT 190 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 + D G R ++K+G R++ TVEL F + LG+ + G ++ +K+L Sbjct: 191 AFVLDADTPGFSAGRKEDKLGMRASETVELLFQDCRIPDSQRLGE--IGDGFIQSLKVL- 247 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 D +S++ + V A A+ Y++ R G + D + +AD+ D A++ Sbjct: 248 --DGGRISIAALGVGTAFGAYEAALAYSKERKQFGKAICDFQAIAFKLADMYTDAQASSL 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+F A+ D + + + + + KY + A V +A++ GG G++++ Sbjct: 306 LTFHAASLKDAGEKVT-------LASSVAKYHSSETAVRVANDAVQIFGGYGFVKDYPAE 358 Query: 432 RHYRESPANSILLGS 446 + YR+S +I G+ Sbjct: 359 KFYRDSKLCTIGEGT 373 >gi|119503431|ref|ZP_01625514.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119460493|gb|EAW41585.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ ++ D +Y ++G K F+S +++ G G + L Sbjct: 124 LTEPGAGSDAASLRTRAERDGD-VYRVNGSKVFISGAGDTDVLVVMTRTGDAGSKGITAL 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L G+ Y + ++K+G + T VE+ S+ G ++ ++ +I Sbjct: 183 LIPADAAGVNYGKKEHKMGWNAQPTRMITFDDVEVPISHRLGEEGQGFAIAMEGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A SV + +L +A Y R G + D + +AD+ ++ AA + Sbjct: 243 NI----ATCSVGTAQQALEDAQAYVSDRKQFGQAIADFQNTQFKLADMVTELVAARQMIR 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A+ D S+ A + K + + V +A++ GG GYI E + R+ Sbjct: 299 LAASKLDAGDSQ------ASTYCAMAKRFATDVGFKVCNDALQLFGGYGYIREYPVERYV 352 Query: 435 RESPANSILLGSGNAM 450 R++ + IL G+ M Sbjct: 353 RDTRVHQILEGTNEVM 368 >gi|311108992|ref|YP_003981845.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310763681|gb|ADP19130.1| acyl-CoA dehydrogenase, N-terminal domain protein 22 [Achromobacter xylosoxidans A8] Length = 388 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 34/253 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA----QVEGRVG 254 LTE + G+D A+ + + D Y L+G K F++ +P++ F ++A Q G G Sbjct: 122 FALTEPQAGSDATALRTTAVRDGDH-YVLNGEKCFITNAPLAGLFTVMARTDPQAPGAKG 180 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307 + ++E G+P GL + +K+G + + F +N G G L T Sbjct: 181 --ITAFIVERGTP-GLSTGQPYDKMGQAGSPVSSVHFQDCRVPAANIIGGQEG-LGFKTA 236 Query: 308 PVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 MK+L I+L +A+ MR+ L + + + R G L+D +++ +AD Sbjct: 237 ----MKVLNKQRIHL-AALCIGPAMRM-LDDTLRFVAERQQFGKPLMDFQLIQAMLADCQ 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA AL + A D A + A I KY+ +M V ++ GG G Sbjct: 291 TEIQAARALVLQTARERDAG-------ADVTLNASICKYFASEMCGRVADRCVQMHGGYG 343 Query: 424 YIEERSIARHYRE 436 YI + I R YR+ Sbjct: 344 YIADHGIERFYRD 356 >gi|295690196|ref|YP_003593889.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432099|gb|ADG11271.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC 21756] Length = 385 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 37/289 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ + L ++E G+D+ ++ + ++ D Y Sbjct: 110 TPEQKRRYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQRGD-RY 155 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 L+G K W ++P +D ++ A+ EG G FLV + ++ G + +K+G R Sbjct: 156 VLNGTKFWITNAPHADTLVVYAKTGEGTRGITAFLVEKGMK-----GFSVSKKLDKMGMR 210 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD--SAIMSVSG---MRVSLAEAIH 337 + T EL F + + D + ++ LD A+++ M+ L + Sbjct: 211 GSDTAELVFEDCE--IPEDNVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDIVLP 268 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R R G + +M+ +AD+ + +++A A + +A + D K+ +AA A +MA Sbjct: 269 YVRDRKQFGQPIGGFQLMQGKVADMYVALSSARAYVYAVARACDAGKTTRFDAAGAILMA 328 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 329 -------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 370 >gi|163740791|ref|ZP_02148184.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis 2.10] gi|161385782|gb|EDQ10158.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis 2.10] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 32/288 (11%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 A +F + P+ ++ AI LTE + G+D+A S + DG Y L+G K Sbjct: 99 AISLFGTQAQQAEWLPLTRSGKAISAFALTEPQSGSDVA--NSTMTAVRDGEHYVLNGEK 156 Query: 233 -WFLSSPMSDAFIMLAQV-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 W + ++D + + A+ EG + F+VP G P +RL+ + AT Sbjct: 157 TWISNGGIADVYTLFARSGEGPGAKGLSAFVVPA----GLPGLEVVERLET-LAPHPLAT 211 Query: 287 VELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARR 341 L FS+ LLG G M +L S + + + G R +L EA+ Sbjct: 212 --LRFSDCRIPRSALLG--APGAGFKIAMSVLDVFRSTVAAAALGFARRALDEALARVTS 267 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPIT 400 RHV G L D +++ IAD+ALD+ A+ L +R A + D +R + EAA A Sbjct: 268 RHVQGAPLADLQMVQGHIADMALDVDASALLVYRAAWAKDSGAARITREAAMA------- 320 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + A +I +A++ GG G + + + YR+ A I G+ + Sbjct: 321 KLFSTDQAQKIIDKAVQLHGGDGVRQGQKVEELYRDIRALRIYEGASD 368 >gi|34540558|ref|NP_905037.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis W83] gi|188994663|ref|YP_001928915.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC 33277] gi|34396871|gb|AAQ65936.1| acyl-CoA dehydrogenase family protein [Porphyromonas gingivalis W83] gi|188594343|dbj|BAG33318.1| putative acyl-CoA dehydrogenase [Porphyromonas gingivalis ATCC 33277] Length = 573 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ A+ + +DG + L+G K F+++ S ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQAVMLKATYSEADGCWYLNGVKRFITNGDSHIHLVLARSEEGTTDA 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R +NK+G + T EL F N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDHRDGGVTVRRTENKMGIKGAPTCELVFKNAKAELCGDRKM--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YA-RRRHVSGGILIDQPVMK-----RAIADIAL 364 ++ A + + V L+EA YA R+ I+ PV + RA AD + Sbjct: 287 ALMNGARLGIMAQSVGLSEAAFREAHSYALDRKQFGKPIIAFAPVYEMLSLIRAKADASR 346 Query: 365 DIAAATALSFRLANSFD----EAKSRSEEAA----YARI---MAPITKYWCCKMAPAVIA 413 + T+ + + E K SEE A ++R+ P+ K + A + Sbjct: 347 AMLYETSRFVDMYKVLEDISHERKLTSEERAEMKHFSRLADAYTPMGKGMTSEFANQNVY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++++ + R YR+ +I G+ V+ + + GT Sbjct: 407 DCVQIHGGSGFMKDYTCERLYRDVRITNIYEGTTQLQVVAAIRHITTGT 455 >gi|304409873|ref|ZP_07391492.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|307302420|ref|ZP_07582178.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] gi|304351282|gb|EFM15681.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS183] gi|306914458|gb|EFN44879.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica BA175] Length = 389 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D + L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M + + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|258591419|emb|CBE67718.1| isovaleryl-CoA dehydrogenase [NC10 bacterium 'Dutch sediment'] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257 L+E G+D +A + ++ DG + L+G K F+++ + +D ++ A V+ G + Sbjct: 123 FALSEPGAGSDASAQQTLVKRDGDG-FVLNGTKNFITNALEADLALVFATVDRGLRAKGV 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L+E G+P G +++ K+G + ++ F + LLG++ + KI Sbjct: 182 YALLVEKGTP-GFTITKVEKKLGLHGTSCCQVVFEDCRVPSDNLLGEMG------QGFKI 234 Query: 315 -LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIA 363 ++ LD+ + ++ V +A+A I YA+ R + D+P+ ++ IAD+A Sbjct: 235 AMVTLDAGRIGIAAQAVGIAQAALDISIRYAKER-----VAFDKPIASFQAIQWMIADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L++R A D+ ++E+A A++ A T A +A++ GG G Sbjct: 290 AQIEAARLLTYRAAWLKDKGLRHTKESAMAKLFASET-------ANRAATKALQIHGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y+ + R +R++ I G+ Sbjct: 343 YLYDFPTQRLFRDARITEIYEGT 365 >gi|284031326|ref|YP_003381257.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283810619|gb|ADB32458.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 443 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 142/332 (42%), Gaps = 51/332 (15%) Query: 147 EAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +AG MS + T + A+ + TP W P+ + D A +E Sbjct: 113 DAGIGMSLTGTGLASSAIFSNGTPEQWSQWLPRCYGTPDDVKVAA----------FCSSE 162 Query: 205 KRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFL 257 G+D++AI ++ G + ++G K W + ++D +++A V+ +G F+ Sbjct: 163 PGAGSDVSAIRTRATYDEKTGEWVINGQKAWATNGGIADIHVVVATVDPSLGTKGQAAFV 222 Query: 258 VP----RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DLNVSTG 307 VP R LE G+ +LK K G R++ T ++ F N +LG L+ Sbjct: 223 VPKSEVRGLEQGT-------KLK-KHGLRASHTADVFFDNVRIPAENVLGGKEKLDARLA 274 Query: 308 PVEDMKILIYLDSAIMSVSGM-------------RVSLAEAIHYARRRHVSGGILIDQPV 354 + + +A M+ M R + A+ YA+ R G +ID Sbjct: 275 KAREPRDGQRARNASMATFEMTRHIVGAQAIGIARAAYEFALEYAKGREQFGRPIIDNQG 334 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A++I AA L +R AN A R E Y + K ++A V E Sbjct: 335 IAFKLADMAMEIDAARLLVWRAAN-MSSALMRGESPNYRHGEGSMAKLKAGEVAVKVTEE 393 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ +GG+GY E + R +R++ +I G+ Sbjct: 394 AIQILGGNGYTREYPVERMHRDAKIYTIFEGT 425 >gi|192292303|ref|YP_001992908.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192286052|gb|ACF02433.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 385 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 22/262 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ ++ G G + L Sbjct: 128 LTEPGSGSDAAALRTRAVRDGDH-YILNGQKQFISGAGANDLYVVMVRTGSDGPGGISTL 186 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + + GL + + K+G + T + F N LGD + KI + Sbjct: 187 VVEKDTPGLSFGANERKMGWNAQPTRTVIFENARVPVANRLGDEGIG------FKIAMAG 240 Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ S+ G + +L + + Y + R G L + ++ +AD+A ++ AA L Sbjct: 241 LDGGRLNIGACSLGGAQAALDKTLAYMKERKAFGKRLDEFQALQFRLADMATELEAARTL 300 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + D + A A + + K + V EA++ GG GY+ E I + Sbjct: 301 LWRAAAALDR------KDADATKLCAMAKRFATDAGFGVANEALQLHGGYGYLAEYGIEK 354 Query: 433 HYRESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 355 IVRDLRVHQILEGTNEIMRLIV 376 >gi|85706529|ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] gi|85668941|gb|EAQ23809.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 388 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 33/321 (10%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEKR 206 +++ V ++ T VH D A P KA P + I + +TE Sbjct: 80 VLAEEVGRSTFGGFSATVLVHTDMASPHLENAGSPEQKARWMPSITSGEKIAAVAVTEPG 139 Query: 207 GGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE----GRVGCFLVPR 260 G+D+A + ++ + DG + ++G K F+++ + D + + A+ + G G + Sbjct: 140 AGSDVAGMRTRA--VQDGSDWVINGTKMFITNGVHGDIYFVGAKTDPDAKGSRGITMFA- 196 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV----EDMK 313 +E G+P G R NK G + T EL F + +LG++N V ++ + Sbjct: 197 -VEKGTP-GFSVGRALNKTGWLCSDTAELIFEDVRIPAENVLGEVNRGFYSVMKNFQNER 254 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I++ M+ + + +L + Y ++R GG+L D+ +++ +AD I A L Sbjct: 255 IVL----GAMACAEAQSALEMTVDYVKQRKAFGGVLWDKQTVRQRLADCQTRIEAGRQLI 310 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A+ + +E + + K +C ++ +V+ + ++ GG GY+ E + R Sbjct: 311 YHAASLDAAGRDCVKEVS-------MVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERM 363 Query: 434 YRESPANSILLGSGNAMVLDV 454 R++ +I G+ M+ +V Sbjct: 364 SRDARVQAIGGGATEVMLEEV 384 >gi|319950686|ref|ZP_08024587.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] gi|319435669|gb|EFV90888.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] Length = 385 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251 + +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYILNGAKTFITGGVHADRVIVCARTAPPREDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L L S G R +K+G +++ T EL F+ D+ V PVED Sbjct: 184 RFGISL---LAVQTSLEGYSVGRKLDKVGLKTSDTAELSFT--------DVKV---PVED 229 Query: 312 M-----KILIYLDSAIMS---------VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + + YL + S + ++ A Y ++R V G + K Sbjct: 230 LLGEENRGFSYLGQNLPSERWGIAFGAYAQAAAAVRFAKEYTQQREVFGKPVAAFQNTKF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A + AA A++ R + D + + EAA A++ +C ++A VI ++ Sbjct: 290 ELASCQAKVDAAQAVADRALEALDAGELTAAEAASAKL-------FCTEVAAEVIDRCLQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG G+I E IAR Y ++ N I G+ M Sbjct: 343 LHGGYGFINEYPIARLYSDNRVNRIYGGTNEVM 375 >gi|227536311|ref|ZP_03966360.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300] gi|227243918|gb|EEI93933.1| acyl-CoA oxidase [Sphingobacterium spiritivorum ATCC 33300] Length = 449 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 32/275 (11%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLS 229 ++W PK MQK V GLTE G+ A +T+ QK G + L+ Sbjct: 175 KQEWLPK-------------MQKMEVIGAFGLTEPEVGSGAAGGLTTTCQKTEQG-WVLN 220 Query: 230 GHK-WFLSSPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 G K W +S SD I+ A+ +G V F++ + +P G +++K K+ R Sbjct: 221 GQKKWIGNSTFSDITIVWARDLDDGEVKGFIIRK----DTP-GFEVEKIKGKMALRIVQN 275 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHV 344 + +N L + + K+L + + M+V R + A+ Y R+R Sbjct: 276 GLITMTNCVVAESDRLQNANSFKDTAKVLQMTRAGVAWMAVGCARGAYENALDYTRQRKQ 335 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + +++ + ++ ++ A L FRL+ D + + E A+ A++ +C Sbjct: 336 FGKPIAAFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV-------FC 388 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++++A E +GG+G + E ++AR ++ A Sbjct: 389 SLRTRDIVSKAREVMGGNGILLEYNVARFLADAEA 423 >gi|225867324|ref|YP_002752702.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] gi|225786168|gb|ACO26385.1| acyl-CoA dehydrogenase [Bacillus cereus 03BB102] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++ S+ K D Y ++G K F+++ + +I+ A G + Sbjct: 127 FALTEPNAGSDAGSLKSRAVKKGDH-YIINGSKVFITNGGEASTYIVFASTNPEAGKSGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + GL + ++K+G + TV+L F D+ V P E++ Sbjct: 186 SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFE--------DMKV---PAENLLGEEGQ 234 Query: 313 --KI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 K+ + LD + + + +AEA I+YA+ R + Q + +AD+A Sbjct: 235 GFKVAMANLDVGRIGIGAQALGIAEAALACAINYAKEREQFEKPIAAQQGIGFKLADMAT 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L +R A+ + +EA+ I K + K A V EA++ GG GY Sbjct: 295 SVEAARLLVYRAASLRAQGLPCGKEAS-------IAKLFASKTAVEVAIEAVQVFGGYGY 347 Query: 425 IEERSIARHYRESPANSILLGS 446 ++ + R +R++ I G+ Sbjct: 348 TKDYPVERFFRDAKITQIYEGT 369 >gi|188590910|ref|YP_001795510.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|170937804|emb|CAP62788.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE G+D AA+ + + D Y L+G K F++S +D I+LA Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTSAVRDGDH-YVLNGVKQFITSGQNADVAIVLAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP S G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----STPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 G ++ +E +I I A S+ R + A+ YA+ R G L ++ Sbjct: 225 DEGGGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A I A + + A D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLAEMATRIDVARQMVWHAAALRDAGRQCLKEAAMAKLFA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|126731614|ref|ZP_01747419.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37] gi|126707780|gb|EBA06841.1| acyl-CoA dehydrogenase-like protein [Sagittula stellata E-37] Length = 384 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 122/282 (43%), Gaps = 37/282 (13%) Query: 185 PTNKA---PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 P KA P+ + AI LTE G+D+AA T + Y L+G K W + + Sbjct: 105 PEQKADWLPLTRAGKAISAFALTEPGSGSDVAANTMSA-TLDGNHYVLNGQKTWISNGGI 163 Query: 240 SDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 +D + + A+ G F+VP +P +RL+ I AT+ T Sbjct: 164 ADVYTVFARTGEAPGAKGMSAFIVPA----DTPGLEITERLQT-IAPHPLATL------T 212 Query: 295 FGFLLGDLNVSTG-PVEDMKILI-YLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGG 347 F L G P + +I + LD A ++ R +L EA+ R + G Sbjct: 213 FNDLRVPATAMIGEPGQGFRIAMSVLDVFRSTVAAAALGFARRALDEALARVTTRQIQGA 272 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCK 406 L D +++ IAD+ALD+ AA L +R A + D R + EAA A++ A Sbjct: 273 PLFDLQMVQGHIADMALDVDAAALLVYRAAWTKDSGAPRVTREAAMAKLFA-------TD 325 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A +I +A++ GG G ++ + YRE A I G+ + Sbjct: 326 QAQHIIDKAVQLHGGDGVKSHETVEKLYREIRALRIYEGASD 367 >gi|146278761|ref|YP_001168920.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145557002|gb|ABP71615.1| acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 403 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 28/255 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A + + +K + G Y L+G K W ++P++D F++ A Sbjct: 134 PGLATGALIGCFGLTEPDAGSDPAGMKTTARKTATG-YVLNGSKMWISNAPIADVFVVWA 192 Query: 248 QVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + E G++ F +LE G GL ++ K+ R++ T E+ + +G+ + Sbjct: 193 KSEAHGGKIRGF----VLEKGM-KGLSAPKIGGKLSLRASITGEIVMDSV---EVGEEAL 244 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRA 358 G VE +K L+ A +S + AEA +H AR+ R G L + + Sbjct: 245 LPG-VEGLKGPFGCLNRARYGISWGVLGAAEACLHAARQYGLDRKQFGRPLAQTQLYQLK 303 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++ DIA S R+ DEA + E M I K C A A + Sbjct: 304 LANMMTDIALGAQASLRVGRLLDEANAAPE-------MISIVKRNNCGKALEAARHARDM 356 Query: 419 IGGSGYIEERSIARH 433 GG+G E+ + RH Sbjct: 357 HGGNGIQEDFHVMRH 371 >gi|319653539|ref|ZP_08007638.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2] gi|317394738|gb|EFV75477.1| hypothetical protein HMPREF1013_04255 [Bacillus sp. 2_A_57_CT2] Length = 537 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/360 (22%), Positives = 146/360 (40%), Gaps = 48/360 (13%) Query: 138 ARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVA 197 A+ L+ QL + P + ++AL+ + E P + +Q T Sbjct: 126 AKRMLIHQLGEAGVACPLTCTIGLIALLEQ-----------YPNEDIPELEQILQHTKEG 174 Query: 198 IG----LG---LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV 249 +G +G +TE +GG+D+ A + + DG Y L G+K+F S +D ++ A++ Sbjct: 175 LGGDFAIGAQFMTEIQGGSDLPANVLEA--VPDGKNYRLYGNKFFCSVAHADYSVVTAKI 232 Query: 250 EG--RVGCFLVPRLL----EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG--- 300 G +V F+VP L E NG R+K K+G T E +++ + +G Sbjct: 233 SGTDKVSTFIVPSWLPGDKEIEKRNGYEINRIKWKMGTAELPTGEFQYNGALAYPVGPAG 292 Query: 301 -DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 + V+ G V L L+ I M + EA Y R V G + D P+ R + Sbjct: 293 KGVAVAVGIV---LTLSRLEIGIACAGFMLRAAREASLYGNFRTVFGKKVKDYPLSARTL 349 Query: 360 ADIALDIAAATALSFRLANSF-------------DEAKSRSEEAAYARIMAPITKYWCCK 406 I A +F++ + F D+ ++ R + + K Sbjct: 350 KKIENAAHRTAAGAFKIYDQFLLLDQPLSAGIPVDQPIELRKQLFNLRELVLLQKICATN 409 Query: 407 MAPAVIAEAMECIGGSGYIEE-RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 V+ +A+ G G +EE S+ R +R+ N G N ++ + +++ T+ + Sbjct: 410 EGAEVLRDAISVFAGHGVMEEFSSLPRIFRDIVVNEQWEGPRNLLLTQIYRDIQRVTDWY 469 >gi|294338708|emb|CAZ87040.1| glutaryl-CoA dehydrogenase(GCDH) [Thiomonas sp. 3As] Length = 393 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++++ + + G Y L+G+K W +SP++D F++ A+ + G + F+ Sbjct: 138 FGLTEPDHGSDPGGMSTRARAVPGG-YALTGNKMWISNSPIADVFVVWAKDDAGEIRGFV 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + D GL L K+G R++ T E+ F + GP Sbjct: 197 L-----DKGAKGLSAPALHGKVGLRTSITGEIVMDQVFCPEENAFAQVRGLKGP------ 245 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AE A Y R G L ++++ +AD+A DI+ Sbjct: 246 FTCLNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLIQKKLADMATDISLG 305 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL D+ + E + + K C A + A + +GG+G +E Sbjct: 306 LQGVLRLGRMKDDGTAAPE-------VTSLLKRNNCGKALDIARTARDMLGGNGISDEFG 358 Query: 430 IARH 433 +ARH Sbjct: 359 VARH 362 >gi|85375125|ref|YP_459187.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594] gi|84788208|gb|ABC64390.1| acyl-CoA dehydrogenase [Erythrobacter litoralis HTCC2594] Length = 394 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 12/256 (4%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 I LG+TE GG+D+A + ++ ++ D Y ++G K ++S M FI LA G G Sbjct: 138 ICLGITEPGGGSDVAQLKTKAERRGD-HYVVNGAKTLITSGMRADFITLAVRTGGDGMGG 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL + G+ L+ K+G S+ T + + L+G+ N G + Sbjct: 197 ISLLLVETDRPGVSRTPLQ-KMGWHSSDTATIHLDDVEVPAENLIGEENHGFGGIMRNFN 255 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A + + R+ +A+ +AR R G L+ + ++ +A + I A A+ Sbjct: 256 GERLGMAQQAAAYARLCYEDALDWARERETFGRPLVTRQAIRHKLARMLQMINATQAMID 315 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A + E + + A ++ A T +C + EA + +GG+ ++ + R Y Sbjct: 316 HAAWTVKEDCAFPGDFALLKVQATQTMEYCAR-------EACQIMGGASFVRGNRVERIY 368 Query: 435 RESPANSILLGSGNAM 450 RE +I GS M Sbjct: 369 REVRVMAIGGGSEEIM 384 >gi|325277761|ref|ZP_08143322.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324097099|gb|EGB95384.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 589 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 114/301 (37%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + A + LTE GTD+ I S+ + +DG Y ++G K F++ D + Sbjct: 154 PLYQGRWAGTMCLTEPHAGTDLGLIRSRAEAQADGSYRITGSKIFITGGEQDLTENIIHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP+ L D G N +++K+G +++AT + F Sbjct: 214 VLAKMPDAPAGAKGISLFLVPKFLVDANGRLGERNAAHCGSIEHKMGIKASATCVMNFDA 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGIL 349 G+L+G N + M L I + S A YA R S G L Sbjct: 274 ATGYLVGAPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQAAARYANERLQSRAAVGPQL 333 Query: 350 IDQ---PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 D+ P++ R + + AA +A + R + + Sbjct: 334 RDKAADPIIHHGDVRRMLLTMRTLTEGGRAFAAYVGQQLDVARYAEAGSEREQAQRMVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|225683417|gb|EEH21701.1| isovaleryl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 433 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG Y L+G K W + P +D ++ A+ + G + Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDAGSKGI 222 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F +LG++N +K+L Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFDDVFVPQENVLGEVN------RGVKVL 276 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R + +++ +AD+ ++A+ Sbjct: 277 MEGLDLERLVLSAGPLGLMQAALDLVLPYTHTRKQFDAPIAHNQLIQGKLADMYTKLSAS 336 Query: 370 TALSFRLANSFDEA----KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A ++ A D+A +RS A + A Y + A +A++ +GG+GY+ Sbjct: 337 RAYTYTTARQIDDAAASDSARSNNAIRKQDCAGAILY-AAERATECALDAIQLMGGNGYV 395 Query: 426 EERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 396 NEIPAGRLLRDAKLYEIGAGT 416 >gi|254466611|ref|ZP_05080022.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] gi|206687519|gb|EDZ48001.1| isovaleryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-FRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + F +LG+ + +++L Sbjct: 187 TAFLIEKEMKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++G M + E + Y R G + + +M+ IAD+ + +A Sbjct: 241 MSGLDYERVVLAGIGLGIMASCMDEMMPYMAERKQFGQPIGNFQLMQAKIADMYTAMNSA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYI 425 A + +A S D ++AA CC A V +A++ GG+GY+ Sbjct: 301 RAYVYEVAKSCDNGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYL 349 Query: 426 EERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370 >gi|282863870|ref|ZP_06272928.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] gi|282561571|gb|EFB67115.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. ACTE] Length = 608 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 53/313 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWTTGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316 Query: 335 AIHYARRRHVSGGIL---IDQ----------PVMKRAI------ADIALDIAAATALSFR 375 A+ YA+ R V G L +D+ P ++RA+ A+ + TA S + Sbjct: 317 ALEYAKER-VQGTDLSQFMDKTAPKVTITHHPDVRRALMTQKAYAEGMRSLVMYTA-SVQ 374 Query: 376 LANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A EA +A + ++ PI K + + + +A++++ GGSGY++E I ++ Sbjct: 375 DAIQVKEAAGEDSKALHGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQY 434 Query: 434 YRESPANSILLGS 446 R++ +++ G+ Sbjct: 435 IRDAKIDTLYEGT 447 >gi|119477415|ref|ZP_01617606.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119449341|gb|EAW30580.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 389 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P +D +++ A+ + + G + Sbjct: 130 LAMSEPNAGSDVVSMKLAAKKQGD-RYILNGNKMWITNGPDADTYVIYAKTDVKAGPKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G +K+G R + T EL F + + + N+ E +++L+ Sbjct: 189 TAFIVERDFPGFSRSPKLDKLGMRGSNTCELVFQDC---EVPEENILGREGEGVRVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG M+ + + + Y R G + + +M+ +AD+ ++ A+ A Sbjct: 246 LDFERTVLSGGPVGIMQACMDQVVPYIHDRKQFGQSIGEFQLMQGKVADMYTELNASRAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA A I+ + + A + +A++ +GG+GYI + AR Sbjct: 306 LYAVAKACDRGEESRKDAA-AVIL------FTAEKATQMALQAIQALGGNGYINDFPTAR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|126175033|ref|YP_001051182.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS155] gi|125998238|gb|ABN62313.1| isovaleryl-CoA dehydrogenase [Shewanella baltica OS155] Length = 389 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D + L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M + + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|322496604|emb|CBZ31674.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 416 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 17/249 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + +++ + +LA+ EG F+V Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILIYLD 319 D G+ + + +G R + T + F N + + G MK+ + Sbjct: 221 ---DADTPGVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTR 277 Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 SA+ +S G+ R + EA YAR R G + + +A++A + A +++R Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + A+ A++MA +A A++ GG+GY + + YR+ Sbjct: 338 WETDQGRRNTYYASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390 Query: 438 PANSILLGS 446 SI G+ Sbjct: 391 KIFSIYEGT 399 >gi|319762133|ref|YP_004126070.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317116694|gb|ADU99182.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 398 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 25/266 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172 Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A +VE + + D GL + K+G R++ T E+ + F Sbjct: 173 SPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 233 VPEENAFPEIRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +IA + R+ DE ++ E + + K C Sbjct: 287 PLAANQLIQKKLADMQTEIALGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365 >gi|254481256|ref|ZP_05094501.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214038419|gb|EEB79081.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D ++ + + D Y ++G K F+S +++ G G + L Sbjct: 124 LTEPGAGSDAGSLRTSAVQDGDD-YLVNGSKVFISGAGETDVLVVMLRTGEAGPKGISAL 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L G+ Y + ++K+G + T V + +N G ++ ++ +I Sbjct: 183 LIPADAQGISYGKKEDKMGWNAQPTRMVTFDNVRVPVANRLGREGQGFAIAMEGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ + +L EA+ Y + R + D + +AD+ D+ AA + Sbjct: 243 NI----ATCSIGTAQQALEEAVAYVQERKQFDTAIADFQATQFKLADMLTDLVAARQMVR 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A+ D S+ A + K + + V +A++ GG GYI+E + RH Sbjct: 299 LAASKLDNKDSQ------ASTYCAMAKRFATDVGFNVCNDALQLYGGYGYIKEYPMERHV 352 Query: 435 RESPANSILLGSGNAM 450 R++ + IL G+ M Sbjct: 353 RDTRVHQILEGTNEIM 368 >gi|88859254|ref|ZP_01133894.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2] gi|88818271|gb|EAR28086.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas tunicata D2] Length = 382 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + +++ A+ + G + Sbjct: 123 LAMSEPNAGSDVVSMKLKAEKRGDK-YILNGNKMWITNGPDAHTYVIYAKTDLNAGAKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 182 TAFIVERDFPGFTQAQKLDKLGMRGSNTCELVFIDC---EVPEENILGGLNNGVKVLMSG 238 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + +A + Y R + +++ IAD+ + AA + Sbjct: 239 LDYERVVLSGGSLGIMQACMDIVVPYIHERKQFDSPIGQFQLIQGKIADMYTQMNAARSY 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GYI E + R Sbjct: 299 VYTVAKSCDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGYINEYATGR 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 LLRDAKLYEIGAGT 365 >gi|84494342|ref|ZP_00993461.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84383835|gb|EAP99715.1| probable Acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 384 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 41/309 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 +T+ +VA+ T + + W P++ + E + +G+TE GG+D+AA+ Sbjct: 94 DITAPYLVAMGTQEQKAR-WLPQVATGE-------------TIMSIGMTEPSGGSDLAAL 139 Query: 215 TSQGQKISDGI--YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271 S K DG + L+G K F+++ D ++ A+ + G + + + + G Sbjct: 140 KSNAVKADDGSGDWILNGSKTFITNGYQCDLAVVAARTDPTKGAKGISLFVLEATDEGFS 199 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVS 326 + +K+G + T EL F N LLG + G + M+ L L +AI ++ Sbjct: 200 KGKPLDKVGQPESDTSELFFENVRLPADRLLGPEGM--GFITMMQKLPQERLGNAIGCIA 257 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381 L E I YA+ R G QP+ K IA++ I A A D Sbjct: 258 HAGQILEETIEYAKERKAFG-----QPIGSFQHNKFKIAELVTMIEVAQAY-------ID 305 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + E + A K+W + V+ E ++ GG GY+ E +AR +R++ N Sbjct: 306 DCVVAHAEGKLTAVDAAKAKWWAAETQSKVLDECVQLHGGYGYMNEYRVARAWRDARINK 365 Query: 442 ILLGSGNAM 450 I G+ M Sbjct: 366 IWAGTNEIM 374 >gi|319943552|ref|ZP_08017834.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599] gi|319743367|gb|EFV95772.1| acyl-CoA dehydrogenase [Lautropia mirabilis ATCC 51599] Length = 611 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 57/350 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS--PMSDAFI--MLAQVEGRVG-- 254 ++E + G+ ++ I ++ + DG + L G+K W + ++D + +LA++E G Sbjct: 160 ISEPQAGSSLSDIRTRAVRQPDGSFRLYGNKMWIVGGDHAVTDNIVHLVLARIEDDSGDI 219 Query: 255 --------CFLVPRLLE-----------DGSPNGLCYQRLKNKIGNRSNATVELEF---- 291 FL P+ L G N + + ++G R + L F Sbjct: 220 MPGVESLSLFLAPKYLPADTNPAEGAAGRGERNDIVAAGIYPQMGQRGATSCLLSFGEGN 279 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRH-- 343 + +L+G+ N V + I +D + + + + A+ YAR RH Sbjct: 280 HLPQGQAGAVAWLVGEENAGMALVNEAAPEIQIDIGLSAAALGYAGYSHALDYARERHQG 339 Query: 344 --------VSGGI-LIDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAA 391 V G I +I+ +KR + + AL RL + D A++ S E A Sbjct: 340 RFPGMNSQVGGQIPIIEHADIKRMLLIQKSYVEGGLALGLWCARLMDEVDTAET-STERA 398 Query: 392 YAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 AR +++P+ K W + A++ +G GY + + + YR++ N+IL G+ Sbjct: 399 RARDLLLLLSPVAKSWSAHNGLIANSLAIQVLGCYGYTRDYPVEQLYRDNRLNTILEGTH 458 Query: 448 NAMVLDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCK 495 + L+++ LL F++ +EQ LG + + + ++ L K Sbjct: 459 GILALELMRDRLLADDFMGFQRFAHEVEQTLGRAAARCGDVRHMAVQLQK 508 >gi|254476399|ref|ZP_05089785.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11] gi|214030642|gb|EEB71477.1| short-chain specific acyl-CoA dehydrogenase [Ruegeria sp. R11] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 30/287 (10%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F + P+ + A+ LTE + G+D+A T D Y L+G K Sbjct: 99 AISLFGTQAQQQEWLPLTRAGKAMSAFALTEPQSGSDVANSTMTATLDGDS-YVLNGEKT 157 Query: 233 WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 W + ++D + + A+ G F+VP G P +RL + Sbjct: 158 WISNGGIADVYTLFARTGEAPGAKGLSAFIVPA----GLPGFEVVERLDTIA---PHPLA 210 Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRR 342 L FS+ LLG G M +L S + + + G R +L EA+ R Sbjct: 211 RLRFSDCRIPKSALLG--QSGQGFKIAMSVLDVFRSTVAAAALGFARRALDEALSRVSAR 268 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITK 401 HV G L D +++ IAD+ALD+ AA L +R A + D +R + EAA A K Sbjct: 269 HVQGAPLADLQMVQGHIADMALDVDAAALLVYRAAWAKDSGSARITREAAMA-------K 321 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A VI +A++ GG G + YR+ A I G+ + Sbjct: 322 LFSTDQAQLVIDKAVQLHGGDGVRRGEKVEELYRDIRALRIYEGASD 368 >gi|71906179|ref|YP_283766.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] gi|71845800|gb|AAZ45296.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Dechloromonas aromatica RCB] Length = 391 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G+D ++ ++ + + G + LSG K W S+P++D F++ A+ +G + F Sbjct: 136 FGLTEPNSGSDPGSLATRARTVPGG-WKLSGSKNWISSAPIADVFVVWAKDDDGVIRGF- 193 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +L+ G P GL + K+G R+ T E+ F LL ++ GP Sbjct: 194 ---ILDKGMP-GLSAPVIHGKVGMRAAITGEIVMDEVFVPNENLLPGVSGLKGP------ 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAA 369 L+SA ++ + AEA + R++ D+P ++++ +AD+ +I Sbjct: 244 FTCLNSARYGIAWGALGAAEACWHTARQYTLDRKQFDKPLAANQLIQKKLADMQTEITLG 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + RL D+ + E + + K C A + A + +GG+G ++ Sbjct: 304 IQGALRLGRMMDDGSATPE-------IVSMMKRNSCGKALDIARTARDMLGGNGISDDFG 356 Query: 430 IARH 433 + RH Sbjct: 357 VIRH 360 >gi|332976571|gb|EGK13412.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 405 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 34/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVE---GRVG--C 255 LTE G+D++ I + QK + G Y L+G K F+++ +++++ A ++ GR G Sbjct: 139 LTEPEAGSDVSGIRTTAQKTTGG-YILNGQKIFITNGARASWVVVFATIDRSLGRAGHRA 197 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDL---NVSTGP 308 F+V E G+P G RL K+G R++ T EL + F L G+ N +GP Sbjct: 198 FVV----EKGTP-GFSCTRLAKKMGIRASETAELLLEDCFVPEENLLGGESYYENRGSGP 252 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + D+ V+ M + +A A + R+ + G L K A A+ Sbjct: 253 SGFRVAMKTFDNTRPIVAAMAIGIARAAFEYTLDLVRKEYPKHGRLYHLASEKLARAE-- 310 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 L+I AA L++ A D +S ++EAA + K K+A V A +E +G +G Sbjct: 311 LEIEAARLLTWEAAWKADIGQSNAKEAA-------MCKAHSGKIALEVCAGCLELLGPAG 363 Query: 424 YIEERSIARHYRESPANSILLGS 446 ++ + + + YR++ I G+ Sbjct: 364 -LDGQIVEKLYRDAKIFDIFEGT 385 >gi|297562204|ref|YP_003681178.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846652|gb|ADH68672.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 385 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 38/290 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIML 246 P + A+G GLTE GG+D A T ++ DG + + G K F+++ +D A + + Sbjct: 113 PRLTSGEALGAFGLTEPGGGSDAGA-TRTTARLEDGQWVVDGTKSFITNSGTDITALVTV 171 Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFG 296 V GR + LVP G+P G + +K+G ++ T EL F + Sbjct: 172 TAVTGRREDGRPEISSILVPA----GTP-GFSVGQKYSKVGWNASDTNELVFEDCRVPEA 226 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILID 351 L+G+ G + ++IL D ++++ + V LA E++ YA RH G + Sbjct: 227 NLVGERG--RGYAQFLRIL---DEGRIAIAALSVGLAQGCVDESVRYAHERHAFGSAIGT 281 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 ++ IA++ A A + RLA + +A SR + A + K A Sbjct: 282 YQAIQFKIAEM-----EARAHTARLA--YYDAASRMLAGEPFKKEAAVAKLVASNAAMDN 334 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 +A + GG G++ + + R YR+ A + +G G + V +L E G Sbjct: 335 ARDATQVFGGYGFMNDYPVGRFYRD--AKILEVGEGTSEVQKMLIARELG 382 >gi|41056265|ref|NP_957475.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Danio rerio] gi|27882298|gb|AAH44447.1| Acyl-Coenzyme A dehydrogenase, long chain [Danio rerio] gi|182889740|gb|AAI65576.1| Acadl protein [Danio rerio] Length = 442 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 29/275 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + +K DG + L+G K F+++ MSD I++ Sbjct: 171 PQMAAGKCIGAIAMTEPGAGSDLQGAKTFAKK--DGTDWILNGSKVFITNGWMSDVVIVV 228 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 A E + + L D G R K+G ++ T EL F + LLG Sbjct: 229 AVTDREAKTAAHGISLFLVDRGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQ 288 Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 +N ++ P E + I A+M ++ E+ +Y +R G + D V+ Sbjct: 289 VNKGFYYLMNELPQERLLI------AVMGLASCEFMFEESRNYVMQRKAFGRTIADLQVV 342 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A++ +I A E K S A+ A KYW + V + Sbjct: 343 QHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA-------KYWATDLQNRVATQC 395 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IA+ + ++ I G+ M Sbjct: 396 LQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIM 430 >gi|77454839|ref|YP_345707.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|77019839|dbj|BAE46215.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 30/286 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK+ S E V + +TE G+D+ I ++ + + Y +SG Sbjct: 111 QQWLPKMASGE-------------VVGAIAMTEPGTGSDLQNIKTKAIRQGEE-YVVSGS 156 Query: 232 KWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ +D + +A+ + + +L + G R+ KIG + T EL Sbjct: 157 KTFITNGSQADLVLTVAKTDPDDKAAGISLMLVPTAAEGFSRGRVLEKIGMKGQDTSELF 216 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345 F N LLG G ++ M+ L L A+ +V+ M + L E + Y R R Sbjct: 217 FDNVRVPATSLLGHTE-GQGFIQLMEQLPQERLLVAVSNVAAMELCLTETLRYVRDRSAF 275 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWC 404 G + K +A++A + R+A +F DE + A + K WC Sbjct: 276 GRPIWGFQNTKFKMAEVATEA--------RVARAFVDECIELHLDGELDIPTAAMAKLWC 327 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + A V ++ GG GY+ E IAR + + + I GS M Sbjct: 328 SERAQRVADACLQLHGGYGYMNEYPIARAWADLRVSQIYAGSSEIM 373 >gi|331270390|ref|YP_004396882.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium botulinum BKT015925] gi|329126940|gb|AEB76885.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum BKT015925] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + DG Y L+G K F++ +P++D F++ A + G Sbjct: 123 FGLTEPNAGTDASA--GQTIAVKDGDKYILNGQKCFITNAPIADVFVIFAMTDKSKGNKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KIL 315 + + + G+ ++++K+G E+ +L D V P E++ K Sbjct: 181 ITAFIVEKDFPGISIGKVEDKMGINGAQVGEI--------ILEDCPV---PAENLLGKEG 229 Query: 316 IYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIA 363 A+ ++ G R+ +A EA Y + R G L + +AD+ Sbjct: 230 RGFGIAMKTLDGGRIGVAAQGLGIAEGAFNEAKEYMKERKQFGKQLYKFQGIAWRMADMD 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I + L ++ A ++ + S AA A++ C A V EA++ GG G Sbjct: 290 VRIEQSRHLLYKAAMDKNDGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI++ + R +R++ I G+ Sbjct: 343 YIKDYPVERMFRDAKITQIYEGT 365 >gi|299134720|ref|ZP_07027912.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] gi|298590530|gb|EFI50733.1| acyl-CoA dehydrogenase domain protein [Afipia sp. 1NLS2] Length = 401 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255 GLTE G+D+ ++ ++ +K+SDG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 143 FGLTEPDAGSDVDSMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVIWAKSQAHDNKIRG 201 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL + + +GP + Sbjct: 202 FILEKGMK-----GLSAPKIAGKLSLRASITGEVVMDGVVVPESALLPNCSGLSGPFGCL 256 Query: 313 KILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 Y + +M + A Y R G L +M++ +AD+ +IA Sbjct: 257 NRARYGISWGVMGAA--EDCFQRARQYVLDRKQFGRPLAATQLMQKKLADMETEIALGLQ 314 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE K +A M + K C A + A + GG+G E + Sbjct: 315 GSLRVGRLMDEGK-------FAPEMISLMKRNNCGKALDIARVARDMHGGNGISSEFHVM 367 Query: 432 RH 433 RH Sbjct: 368 RH 369 >gi|113931598|ref|NP_001039250.1| long-chain acyl-CoA dehydrogenase [Xenopus (Silurana) tropicalis] gi|89273381|emb|CAJ81317.1| acyl-Coenzyme A dehydrogenase, long chain [Xenopus (Silurana) tropicalis] Length = 444 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 41/281 (14%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ MSD I++ Sbjct: 173 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWMSDVVIVV 230 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294 A E R + L D G R KIG ++ T EL F + Sbjct: 231 AVTNREARTPAHGISLFLVDNGTKGFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQ 290 Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 F +L+ +L P E + I A M+++ E +Y ++R G + Sbjct: 291 ENKGFYYLMAEL-----PQERLLI------ADMALASCEFMFEETRNYVKQRKAFGKTIA 339 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++ +A++ I L N A+ R + A A + KYW + Sbjct: 340 HLQTVQHKLAELKTQICIGRTF---LDNCLQLHAEKRLDSAT-----ASMAKYWASDLQN 391 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 +V + ++ GG GY+ E IA+ Y +S I G+ M Sbjct: 392 SVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIM 432 >gi|46138579|ref|XP_390980.1| hypothetical protein FG10804.1 [Gibberella zeae PH-1] Length = 426 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 21/253 (8%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ ++ G Y LSG K W +SP++D ++ A Sbjct: 153 MAKGKMLGAFGLTEPNHGSDPGSMETVAKPHPTKKGYYSLSGAKTWITNSPIADVLMVWA 212 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 +++ G++ FLV R +D P L +K+K G R++ T ++ N + ++ Sbjct: 213 KLQETGKIRGFLVER--KDCPPGTLETPAIKDKNGLRASITGMIQLDNCPVPENNMFPEV 270 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSG-MRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIA 360 GP + Y M V G + LA A Y+ R+ G L ++++ +A Sbjct: 271 EGLRGPFSCLNNARY--GIAMGVMGALEDCLARARTYSLERKQFKGNPLARYQLVQKKLA 328 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D + D A T + ++ DE K+ E M + K C A E G Sbjct: 329 DASTDAAYGTLAAIQVGRLKDEGKATPE-------MISMVKRQNCDTALRNARLLQEIFG 381 Query: 421 GSGYIEERSIARH 433 G+ +E I RH Sbjct: 382 GNAASDEYMIGRH 394 >gi|329907326|ref|ZP_08274637.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae bacterium IMCC9480] gi|327547002|gb|EGF31895.1| Acyl-CoA dehydrogenase, short-chain specific [Oxalobacteraceae bacterium IMCC9480] Length = 376 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ + ++ LTE G+D +++ + + D Y L+G K F++S +D I+LA Sbjct: 111 PLAQGTMLGAFCLTEPHAGSDASSLLTTAVRDGDD-YVLNGVKQFITSGKHADVAIVLAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G F VP S G RL++K+G S+ T + F N L+G Sbjct: 170 TDKAAGKRGISAFWVPT-----SAPGYVVTRLEDKLGQHSSDTAAIAFENCRIPVANLIG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 D ++ +E +I I A +V R + A+ YA+ R G + + ++ Sbjct: 225 DEGQGYRIALSGLEGGRIGI----AAQAVGMARAAFDAALAYAKDRSSFGKTIYEHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D +EAA A++ A +MA V ++A+ Sbjct: 281 FKLADMATQLEAARQLVWHAASLKDAGVPCLKEAAMAKLFA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|167534479|ref|XP_001748915.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772595|gb|EDQ86245.1| predicted protein [Monosiga brevicollis MX1] Length = 411 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 21/265 (7%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 M + + G+TE G+D+A I + K D Y L+G+K W ++ ++ F +LA+ Sbjct: 143 MTEEPLVASYGVTEPIAGSDVAGIKTTAVKKGDD-YVLNGNKMWITNAGHANWFFVLAKT 201 Query: 250 EGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGD 301 + + DG GL R + +G R++ T + F +N G Sbjct: 202 DPNAKASKAFTGFIVDGDSAGLTRGRKEINMGQRASDTRGVTFEDVVVPAANRLGAEGDG 261 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ G + + + A +V + +L EA YA+ R G + D + +AD Sbjct: 262 FKIAMGAFDRTRPPV----AAGAVGLAQRALDEATAYAKDRKAFGRPIADNQAVAFMLAD 317 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A+ + A ++ R A D+ + + A I K + +A +A++ GG Sbjct: 318 MAIGVETARLITRRAAWEVDQGRRNT-------YYASIAKAFAADVANKNATDAVQVFGG 370 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY + + + R++ I G+ Sbjct: 371 NGYNSDYPVEKLMRDAKIYQIYEGT 395 >gi|160901422|ref|YP_001567004.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160367006|gb|ABX38619.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 395 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G + L+G K W + P +D ++ A+ E + V Sbjct: 131 LAMSEPGAGSDVISMKLKAED-KGGYFLLNGTKMWITNGPDADTLVVYAKTEPELNARGV 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F N + NV G K+L+ Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSHTGELVFENV---EVPAENVLGGLNNGAKVLMSG 246 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD ++G M+ + + Y R G + + +++ +AD+ + A + Sbjct: 247 LDYERAVLTGGPLGIMQSVMDNVVPYIHDRKQFGQSIGEFQLIQGKVADMYTVLQAGRSF 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ +A + D + E R WC + A + E ++ GG+GYI E + R Sbjct: 307 AYTVAKNLDLLGT--EHVRQVRKDCASVILWCAEKATWMAGEGVQIYGGNGYINEYPLGR 364 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 365 LWRDAKLYEIGAGT 378 >gi|320166428|gb|EFW43327.1| acyl-Coenzyme A dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 420 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D A+ ++ +K D Y L+G K W ++ + F+++A + G C Sbjct: 162 LSEAGSGSDAFALQTKAEKKGDD-YILNGTKMWITNAAEAGVFLVMANADFSKGYKGITC 220 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+V R +P GL + ++K+G R+++T + ++ +LG + Sbjct: 221 FIVDR----DTP-GLEIGKKEDKLGIRASSTCSVNLTDVRVPASNILGKFG------QGY 269 Query: 313 KILI-YLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366 K I L+ + + + LA+ + Y +R G I+ + M+ IA +A +I Sbjct: 270 KYAISMLNEGRIGIGAQMLGLAQGVFDVTMPYLHQRKQFGTIIAEFQGMQHQIAQVATEI 329 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A + + ++EAA A++ + ++A ++ +E +GG G+ + Sbjct: 330 TAARLLVYNAARLQEAGRPVAQEAAMAKL-------YASQVAETSASKCIEWLGGVGFTK 382 Query: 427 ERSIARHYRESPANSILLGSGN 448 + ++YR+ I G+ N Sbjct: 383 DFPAEKYYRDVKIGKIYEGTSN 404 >gi|320538446|ref|ZP_08038313.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421] gi|320144708|gb|EFW36457.1| butyryl-CoA dehydrogenase [Treponema phagedenis F0421] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 28/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISD---GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC 255 GLTE GTD A Q + D + L+G K F+++ ++ +I+ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDEATNEWVLNGSKIFITNAGYANVYIIFAMTDKSKGV 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + + + + G + + K+G + +AT EL F N LLGD+N + Sbjct: 181 KGISAFIVESTTPGFSVGKKEKKLGIKGSATCELIFENARIPKDNLLGDVN------KGF 234 Query: 313 KI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI ++ LD + ++ + LA E + Y + R G + + +A++ + + Sbjct: 235 KIAMMTLDGGRIGIASQALGLAQGALDETVKYVKERKQFGRPISAFQNTQFQLANLEVKV 294 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L ++ A + S +AA A++ A + A V +A++ GG GY Sbjct: 295 EAARLLVYKAAWAESNGLPYSVDAARAKLFA-------AETAMEVTTKAVQFFGGYGYTR 347 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 348 EYPVERMMRDAKITEIYEGT 367 >gi|229542455|ref|ZP_04431515.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229326875|gb|EEN92550.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 378 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 24/265 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-GRVGCFLVP 259 LTE G+D + ++ K Y L+G K F+++ +D +I+ A+ E G + F+V Sbjct: 124 LTEAEAGSDAKNLKTRAVKQGRH-YVLNGSKMFITNGGEADTYIVFARTEDGNITAFIVE 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318 + + G + + K+G + TV+L F N + N E KI + L Sbjct: 183 KTMP-----GFRVGKDEKKMGLHGSKTVQLHFEN---LQVPAENRLGEEGEGFKIAMAVL 234 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D+ + ++ + +AE A+ YA+ R G + +AD+A +I A+ L Sbjct: 235 DAGRIGIAAQALGIAEGAYERALQYAKNRRQFGKPIHAFEGTGFKLADMATNIEASKLLL 294 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A +EAA A+++A T A EA++ GG GY E+ + R Sbjct: 295 YRAAFLRSNGLDCKKEAAMAKLLASQT-------AVDTAIEAVQIFGGYGYTEDYPVERF 347 Query: 434 YRESPANSILLGSGNAMVLDVLNLL 458 R++ I G+ + + N L Sbjct: 348 MRDAKITQIYEGTSEIQRIVISNQL 372 >gi|308475085|ref|XP_003099762.1| hypothetical protein CRE_23613 [Caenorhabditis remanei] gi|308266417|gb|EFP10370.1| hypothetical protein CRE_23613 [Caenorhabditis remanei] Length = 572 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 39/284 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 ++E G+D A+ + +K D + +SG K W S + F++ A + + C Sbjct: 207 ISESGAGSDAFALKTVAKKDGDD-FLISGSKMWITDSGEAQVFVVFANADPSQKYKGITC 265 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V R +E GL R ++K+G R+++T ++ F N +LG+ G Sbjct: 266 FIVERGVE-----GLTVDREEDKLGIRASSTCQVHFDNVRVHKSAILGEY----GKAYKY 316 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILID---QPV----MKRAIA 360 I L++ + + + LA+ I Y ++R G LID P ++ IA Sbjct: 317 AIEC-LNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGKRLIDFQSSPNRIQGLQHQIA 375 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 + +I AA L + A + EAA A++ A ++A + A+ ++ +G Sbjct: 376 QVRTEIEAARLLVYNAARMKEYGIPYVREAAMAKLFA-------SQVATSTSAQCVKWLG 428 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 G G+ +E + YR++ I G+ N + + L++ L Sbjct: 429 GVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNEYKL 472 >gi|302344609|ref|YP_003809138.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301641222|gb|ADK86544.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 413 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 23/263 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQVE--------GR 252 LTE RGG+D ++ D Y +SG K F+ +D F++ A+ + Sbjct: 127 LTEPRGGSDFFGTSTVAVDQGDH-YLVSGQKRFIVGGEGADYFLVYARTDHDPKAHPHKA 185 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309 + C +V R P G+ + L +G R L F + ++G +N + Sbjct: 186 LTCLIVDR-----GP-GVKVEYLYGLMGCRGGGAARLVFKDAVAPKSNVVGQINNAYAVF 239 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M + L +A M++ R +L A Y RR G ++ + +A+ A+ + A Sbjct: 240 NTMMVPERLGTAAMTIGAARPALEVATGYTTRRKAFGQVIAQFQGVSFQVAEAAMLLDAC 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A+++ A++ D + R + TK + + V AM+ +GG GY Sbjct: 300 RAIAYTTASAVD----KGVRPDVVRRLVSQTKKFITESCQKVAHNAMQVMGGIGYTNVFP 355 Query: 430 IARHYRESPANSILLGSGNAMVL 452 + R +R+ SI GS M + Sbjct: 356 VERIFRDLRLASIWTGSNEVMSM 378 >gi|28210225|ref|NP_781169.1| acyl-CoA/butyryl-CoA dehydrogenase [Clostridium tetani E88] gi|28202661|gb|AAO35106.1| acyl-coA/butyryl-coA dehydrogenase [Clostridium tetani E88] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTD-----IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF 243 P T IG LTE G+D + AI I +G+ C S ++P++D F Sbjct: 112 PDLSTGRKIGAFNLTEPEAGSDAANGSVTAIKEGNHYIINGLKCFS-----TNAPVADTF 166 Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 ++ + G + + + G+ +++NK G + ++ + N L+G Sbjct: 167 VVFVITDKSKGPKGISAFIVEKDFPGISIGKVENKCGINAAQVSDVIYDNCKVPAENLIG 226 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR--- 357 + G L LD + V+ + +AE + ++ + +P+ K Sbjct: 227 EEGKGLGIG-----LSTLDGGRIGVAAQGLGIAEGAFEIAKNYMKERVQFGKPIYKNQYL 281 Query: 358 --AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +A++A++I A L ++ A DE K S AA A++ C +A V EA Sbjct: 282 GFKMAELAVEIEKARYLLYKAALDKDEGKPYSVSAAMAKL-------ACTDLAMKVTVEA 334 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ +GG+GY+++ ++ R R++ I G+ Sbjct: 335 VQMLGGNGYMKDYNVERMMRDAKITQIYEGT 365 >gi|297263698|ref|XP_002798848.1| PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial [Macaca mulatta] Length = 408 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 21/200 (10%) Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + FLVP GL + ++K+G R ++T L F + + ++ P Sbjct: 206 ISAFLVPM-----PTPGLTLGKKEDKLGIRGSSTANLIFEDC---RIPKDSILGEPGMGF 257 Query: 313 KILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +A+ A +YA R G L V++ +AD+AL + Sbjct: 258 KIAMQTLDMGRIGIASQALGIAQTALDCAANYAENRMAFGAPLTKLQVIQFKLADMALAL 317 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K +EAA A++ A + A A+ +A++ +GG GY+ Sbjct: 318 ESARLLTWRAAMLKDNKKPFIKEAAMAKLAA-------SEAATAISHQAIQILGGMGYVT 370 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 371 EMPAERHYRDARITEIYEGT 390 >gi|294012056|ref|YP_003545516.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S] gi|292675386|dbj|BAI96904.1| butyryl-CoA dehydrogenase [Sphingobium japonicum UT26S] Length = 380 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/397 (22%), Positives = 167/397 (42%), Gaps = 35/397 (8%) Query: 61 LGEYVLSCTAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIW 120 +G++ L+ + MA T A P WD+ P +R + G SI+ Sbjct: 1 MGQFDLTEDQLAIQEMARRFTAD--AITPFAAEWDEKHIFP--RETIRAAAELGFG-SIY 55 Query: 121 DRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFS 180 V ++A I RL +EA PS ++ + M + + + + Sbjct: 56 -------VSEEAGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDR-FGSQAVK 107 Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS 240 +Y P+ PM++ LTE G+D AA+ ++ + D Y ++G K F+S Sbjct: 108 DKYLPS-MVPMERIGSYC---LTEAGSGSDAAALKTRAVRQGDH-YVVTGSKQFISGGGE 162 Query: 241 DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG 300 + ++ G G + L+ + G+ + + K+G S T ++ F G + Sbjct: 163 NEIYVVMVRTGDEGPKGISCLVIEKDMAGVSFGAQERKLGWHSQPTAQVNFD---GVRVP 219 Query: 301 DLNVSTGPVEDMKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 N+ G E +I ++ LD + S+ G + + EA+ Y + R G + D Sbjct: 220 VENLVGGEGEGFRIAMMGLDGGRLNIGACSLGGAQRCIDEALSYTKDRKQFGQSIADFQN 279 Query: 355 MKRAIADIALDIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+ ++ AA L + A E A ++ AA A+ +A T +V+ Sbjct: 280 TQFMLADMETELQAARTLLYAAAVKVTENAPDKTRFAAMAKRLATDT-------GSSVVD 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A++ GG GY+ + + R +R+ +SIL G+ M Sbjct: 333 RALQLHGGYGYLMDYPVERFWRDLRVHSILEGTNQVM 369 >gi|229491757|ref|ZP_04385578.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229321438|gb|EEN87238.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 384 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLS-SPMSDAFIMLAQV----EG 251 + + +TE G+D+AAI + + DG Y L+G K F++ + + +++A+ E Sbjct: 122 LAVAMTEPGTGSDLAAIRTTAKLSDDGESYILNGAKTFITNASQATHMVVVARTGDPGEN 181 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R G + + D G R +KIG + + T E+ F+N +LG+ + Sbjct: 182 RRGGLSL--FVVDTESAGFEVGRRLDKIGLKFSDTCEVSFTNVRVPVTDVLGEEGAAFSY 239 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L A + ++A A+ Y R V G + D K +A+ A D+AA Sbjct: 240 LGQNLPRERLAMAAGGCATAAAAIAHAVSYTSDRRVFGKPVADFQNTKFVLAECATDLAA 299 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + D A + + + + A I K +C +MA VI + ++ GG GYI E Sbjct: 300 GQTM-------VDHAVALEDAGELSAVDAAICKLFCTEMAGRVIDKCLQLHGGYGYILEY 352 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR Y ++ + I G+ M Sbjct: 353 PIARLYADTRVSRIYGGTSEVM 374 >gi|196248254|ref|ZP_03146955.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|196211979|gb|EDY06737.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 392 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 55/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250 +TE G+D I K D + L+G K F++ F+M+ + Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQATN 184 Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 GR G CF+V R + +P L ++ ++ N EL + G+ Sbjct: 185 GREGVTCFIVDRDMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHY----GYK 237 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 LG L ++ A V V AE AI YA+ R G + ++ Sbjct: 238 LG--------------LEWIGYARWVVGARAVGTAERLLQMAIDYAKERVTFGKPIAERQ 283 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ IAD A++I AA L A + DE + R +A + K + M V+ Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------RHLASMAKLFGANMGNRVVD 336 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY +E I R YRE+ I G+ L + L KG Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384 >gi|327309784|ref|YP_004336682.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326955119|gb|AEA28815.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 387 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 37/270 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252 G+ LTE GTD+ IT+ ++ D Y ++G K W ++ +D +L + + Sbjct: 121 GIALTEPGAGTDLQGITTVAKRDGDD-YVVNGTKMWITNARHADPLPVLVKTDPAATPAH 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308 G + LL + G K+G + + E+ +L D+ V G Sbjct: 180 RGMSI---LLVEADSAGFEVTADIGKLGYKGTESCEV--------VLADVRVPASQLLGG 228 Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360 VE + L L++ ++++ V +A EA+ YAR R GG + + ++ +A Sbjct: 229 VEGRGLQQALSALETGRINIAARSVGVAQRAYDEALSYARERTAFGGPIGEFQAIQLRLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A+ + +A +++ A+ DE E+ A+I A C +AM G Sbjct: 289 EMAVALQSARLMTYWAASRMDEGVRMDTESGMAKIAASEAALSCAM-------DAMRIHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY E + R YR++P SI G+ + + Sbjct: 342 GYGYSTEFEVERLYRDAPLMSIGEGTNDVL 371 >gi|319650452|ref|ZP_08004593.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317397863|gb|EFV78560.1| acetyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 594 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 34/292 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W ++ +D F++ A+++G F+V Sbjct: 150 LTEPSSGSDALGAKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G+ + K+G +S++T L + LLG+ G V IL Sbjct: 210 EREFP-----GVSVGAEEKKMGIKSSSTRTLILEDAQVPKENLLGEF--GKGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +V G + + A+ YA++R + + K + +A I AA + Sbjct: 263 NIGRYKLGVGAVGGAKRAFELAVQYAKQRQQFKTPISQFNLTKEKLGTMASKIYAAESAV 322 Query: 374 FRLANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +R F++ S+ S+E A YA I + K++ ++ V+ E ++ G Sbjct: 323 YRTVGLFEDRMSKLSDEEVKDGKEVAKSIAEYA-IECSMNKFFNTEVLDYVVDEGVQIHG 381 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTL 472 G G++ E I R YR+S N I G+ ++ LL GT L + L L Sbjct: 382 GYGFMAEYEIERAYRDSRINRIFEGTN-----EINRLLVPGTYLRKALKGEL 428 >gi|315925740|ref|ZP_07921948.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620983|gb|EFV00956.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] Length = 396 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 43/265 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255 LTE G+D +A + + D Y L+G K F+SS ++D F + A + G C Sbjct: 137 LTEADAGSDASATRTTAVRDGDD-YILNGSKCFISSGGIADMFTVFAVTDKEKGAHGISC 195 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLG--D 301 FLV + E G+ + +NK+G R + T L F + GF++ Sbjct: 196 FLVEKERE-----GVGVGKEENKMGLRLSNTTSLSFDDVRVPAKNLIGEEGQGFMIAMQS 250 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L+ S G V L + AI EA YA R G +I + +AD Sbjct: 251 LDRSRG-VNSYGCLGIAERAI----------DEATKYAMVRRTFGKPIIKNQGISFMLAD 299 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L + A+ D+ Y + +TK + +A V +A++ +GG Sbjct: 300 MEIQTTAARTLLYHCADMIDKT------GQYDTRLGSVTKTFVSDVAMKVTTDAVQILGG 353 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY +E + + R++ I G+ Sbjct: 354 YGYSKEYPVEKLMRDAKIFQIFEGT 378 >gi|227819568|ref|YP_002823539.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234] gi|227338567|gb|ACP22786.1| glutaryl-CoA dehydrogenase [Sinorhizobium fredii NGR234] Length = 395 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE G+D A + ++ K DG + W ++P++D F++ A+ E G + Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEDGYRLIGSKMWISNAPLADVFVVWAKSEAH-GNAIRG 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316 +LE G GL ++ K+ R++ T E+ N G LL D+ GP Sbjct: 196 FVLEKGM-KGLSAPKIAGKLSLRASITGEIVLDNVEVGEEALLPDVEGLKGP------FG 248 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE + E M + K C A + A + GG+G EE + Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISLVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361 Query: 432 RH 433 RH Sbjct: 362 RH 363 >gi|194291863|ref|YP_002007770.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|193225767|emb|CAQ71713.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 367 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVG--C 255 LTE + G++ + ++ + +D + L+G K F+++ + ++ A E G+ G Sbjct: 115 LTEPQAGSEAHNLRTRA-RFTDNGWVLNGSKQFVTNGQRAGVAVVFAATEPERGKKGISA 173 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G+P G + K+G R++ T + + LLG+ L ++ Sbjct: 174 FLVP----TGTP-GFIVHAPEKKLGIRASDTCAITLEDCVVPHDALLGEPGEGLRIALSN 228 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + A YA R G L + P + +AD+A ++ A Sbjct: 229 LEGGRIGI----AAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNA 284 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L R A + EA+ A++ A ++A V ++A++ GG GY+E+ Sbjct: 285 ARLLVHRAARMRSDGVPCLSEASQAKLYAS-------ELAERVCSKALQIHGGYGYLEDY 337 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 338 PVERHYRDARITQIYEGT 355 >gi|153001362|ref|YP_001367043.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS185] gi|151365980|gb|ABS08980.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS185] Length = 389 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 120/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D + L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + A + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|221067808|ref|ZP_03543913.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220712831|gb|EED68199.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 392 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253 +G++E G+D++ I S +K D Y +SG K W +S +D ML EG V Sbjct: 123 IGVSEPGAGSDVSGIRSHARKDGDD-YVISGQKMWITNSIQADWMCMLVNTSEGPVHKNK 181 Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 +VP L +G L Q+L+ KIG S+ T L F +L+G Sbjct: 182 SLIMVP--LREGPRGKLTKGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236 Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G + M+ + S SG M + + I +A++R + G LIDQ ++ +A++ Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A AL++R A + + + A+ A++ + ++ V ++ GG Sbjct: 296 QTEVEALRALTYRAAQIYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 G+ + ++R YR+ SI G+ M+ Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377 >gi|94314071|ref|YP_587280.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93357923|gb|ABF12011.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 39/296 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK+ + E + + ++E G+D+ ++ ++ K D Y Sbjct: 105 TEEQKRKWLPKMATGE-------------LVAAIAMSEPGAGSDLKSVKTRALKEGDS-Y 150 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVP-RLLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F+++ ++ +++ + + G V ++E G R+ K+G + Sbjct: 151 VINGSKTFITNGYHANLILVICKTDPEAGARGVSIVVVETDGQQGFRRGRILEKMGQKGQ 210 Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334 T EL F + L G P E M I A+ +++ M +L Sbjct: 211 DTAELFFDDMRVPCANLLGTEEGKGFYQLMQQLPQERMII------ALGALASMERALGL 264 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 I Y R R V G LI+ + +A+ + A A SF N E R E Sbjct: 265 TIEYVRNRKVFGESLIELQNTRFRLAECKTN--ATIARSF--VNDCMEKILRGELDPGTA 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 MA K+WC + + +I E ++ GG GY+ E IAR Y + + I GS M Sbjct: 321 AMA---KWWCTQRSCEIIDECLQLHGGYGYMMEYPIARMYVNARVSKIYGGSNEIM 373 >gi|126740367|ref|ZP_01756055.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] gi|126718503|gb|EBA15217.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 32/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 + + G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFIVEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLGEEGRGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ + E + Y + R G + + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----MDEMMPYLKERKQFGQPIGNFQLMQAKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426 A + +A + D+ ++AA CC A V +A++ GG+GY+ Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 + + R +R+ A + +G+G + + +L Sbjct: 351 DNPVGRIFRD--AKLMEIGAGTSEIRRML 377 >gi|169622111|ref|XP_001804465.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15] gi|111057387|gb|EAT78507.1| hypothetical protein SNOG_14270 [Phaeosphaeria nodorum SN15] Length = 436 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 37/304 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + ++ K+W PK+ T+ L+E G+D A+ ++ K +G Y Sbjct: 156 SEKLKKEWLPKL--------------ATNTVGSFCLSEPVSGSDAFALATKATKTDNG-Y 200 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +SG K W +S ++ FI+ A ++ + + ++E G+P G + + K+G +++ Sbjct: 201 KISGSKMWITNSVEANFFIVFANLDPSKKYKGITAFIVEKGTP-GFSIAKKEKKLGIKAS 259 Query: 285 AT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 +T VE+ N G + G + + +I I +A M+ + A + Sbjct: 260 STCVINFDDVEIPKDNLLGKEFEGYKYAIGLLNEGRIGI---AAQMTGLALGAWENAAGY 316 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM- 396 R G ++ + M+ +A +I AA AL + A R +EA +M Sbjct: 317 VWNDRKQFGQLVGEFQGMQHQLAQAWTEIQAARALVYNAA--------RKKEAGEDFVMD 368 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + K + ++A V A+E +GG G++ E +++R+S +I G+ N + + Sbjct: 369 AAMAKLYSSQVAGRVSGSAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLTTIGK 428 Query: 457 LLEK 460 L+K Sbjct: 429 HLQK 432 >gi|300773424|ref|ZP_07083293.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300759595|gb|EFK56422.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 383 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 25/293 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIGL-GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F+ E P T+ IG GLTE G+D +T+ ++ D + L+G K F++ Sbjct: 101 FANEEQKKKYLPKLATAEWIGAWGLTETGSGSDAGGLTTVAERDGD-YFILNGSKNFITH 159 Query: 238 PMSDAFIMLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 +S ++ G+ G ++E G+P G + +NK+G R++ T L F N Sbjct: 160 AISSEVAVVITRTGQKGDKKGKTAFIIEKGTP-GFSAGKKENKLGMRASETACLFFDNCR 218 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++G+ G V+ +K+ LD +S++ + + +A A+ YA R Sbjct: 219 VHKDQIVGE--EGQGFVQALKL---LDGGRISIAALSLGIARGAYECALKYANEREQFNQ 273 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + D + +A++A + AA L+ R A E+ ++S + ++ + K + + Sbjct: 274 KIFDFQAVGFKLAEMATQVEAAELLT-RQAAFLKESGTKSSK------ISAMAKLYASEA 326 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A V E+++ GG G+ ++ +++R++ +I G+ + + + ++K Sbjct: 327 AVEVSNESVQIFGGYGFTKDYPAEKYFRDAKLCTIGEGTSSIQKMVIAREIQK 379 >gi|121608860|ref|YP_996667.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553500|gb|ABM57649.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 394 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 29/269 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-- 255 +G++E G+D+A I S +K DG Y +SG K W +S +D ML + G Sbjct: 123 IGVSEPDAGSDVAGIRSVARK--DGADYLISGQKMWITNSLQADWMCMLVNTDSGSGSAH 180 Query: 256 -----FLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 +VP G +P Q+++ KIG S+ T L F + +G Sbjct: 181 KNKSLVIVPLRAGPGGKLTPGVQIAQKIR-KIGMHSSDTGLLHFDEVRVPQRYRIG--AE 237 Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G V M+ L A ++ + + I +AR+R + GG L DQ ++ +A++ Sbjct: 238 GQGFVYQMQQFQQERLWCAASTLETLTHCIDWTIEWARQRQLFGGALADQQWVQFKLAEL 297 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A AL++R + + + E A+ A++ A ++ V ++ GG Sbjct: 298 KTEVEALRALTYRACDLYVAGQDVLELASMAKLKAG-------RLNRTVPDTCLQFWGGM 350 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 GY E +AR YR+ SI G+ M+ Sbjct: 351 GYTLENKVARMYRDGRLASIGGGADEVML 379 >gi|145223033|ref|YP_001133711.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315443489|ref|YP_004076368.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145215519|gb|ABP44923.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315261792|gb|ADT98533.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 386 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 22/263 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGIYCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251 + +TE G+D+A + + + D Y ++G K F++ M +D I++A+ Sbjct: 124 IAMTEPGTGSDLAGMRTTAVRDGSGPDADYIVNGAKTFITGGMQADLVIVVARTSTDPDN 183 Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 R G L+ ++EDG G R K+G + T EL F + +LG+++ + G Sbjct: 184 RRKGLTLL--VVEDGM-EGFTRGRELEKMGCKVQDTAELSFVDVRVPAANVLGEVDEAFG 240 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + L A+ SV+ R ++A AI Y R R G + K +A + ++ Sbjct: 241 YLGHNLAQERLTVAVGSVAQARSAIAAAIDYTRNRKAFGTPVASFQNTKFELAACSTEVE 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA A+ D A S E + A TK +C +M V+ ++ GG GY+ E Sbjct: 301 AAQAM-------LDRAVSLHVEGELSGADAARTKLFCTEMQQRVVDRCLQLFGGYGYMME 353 Query: 428 RSIARHYRESPANSILLGSGNAM 450 IAR Y ++ I G+ M Sbjct: 354 YPIARLYTDARVARIYAGTSEVM 376 >gi|331699922|ref|YP_004336161.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326954611|gb|AEA28308.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 387 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 37/270 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252 G+ LTE GTD+ IT+ ++ D Y ++G K W ++ +D +L + + Sbjct: 121 GIALTEPGAGTDLQGITTVAKRDGDD-YVVNGTKMWITNARYADPLPVLVKTDPAAAPAH 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308 G + LL + G K+G + + E+ +L D+ V G Sbjct: 180 RGMSI---LLVEADSAGFEVTADIGKLGYKGTESCEV--------VLTDVRVPASQLLGG 228 Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360 VE + L L++ ++++ V +A EA+ YAR R GG + + ++ +A Sbjct: 229 VEGRGLQQALSALETGRINIAARSVGVAQRAYDEALRYARERTAFGGPIGEFQAIQLRLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A+ + +A +++ A+ DE E+ A+I A C +AM G Sbjct: 289 EMAVALQSARLMTYWAASRMDEGVRMDTESGMAKIAASEAALSCAM-------DAMRIHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY E + R YR++P SI G+ + + Sbjct: 342 GYGYSTEFEVERLYRDAPLMSIGEGTNDVL 371 >gi|323694452|ref|ZP_08108623.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673] gi|323501533|gb|EGB17424.1| acyl-CoA dehydrogenase [Clostridium symbiosum WAL-14673] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 22/281 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K LTE G+D A + +K D Y ++G K F+++ P+ D ++ A Sbjct: 111 PVMKGEKEGTFALTEPSAGSDAATQNTIARKDGD-YYIINGRKAFITAAPLCDFAVVFAA 169 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 + +G + + + G + + K+G + T ++ N +LG+ Sbjct: 170 TDVLLGARGITAFIIERDTPGYSVGQPERKMGVNGSPTADIILENVKVHKSQILGE---- 225 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 G M + LDS + V+ + +AEA + Y R+R G L + ++ +A Sbjct: 226 EGKAFQMAMKT-LDSGRLVVAAQCLGIAEAAMKEAVGYVRQRRQFGAALSEFQGIQFMLA 284 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ + A AL + A D + ++EAA A KY+ +M + A+A++ G Sbjct: 285 DMETKLCCARALIYDAAEKKDAGMNITKEAAAA-------KYFASEMCNEIAAKALQLHG 337 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 GY+++ I R +R++ +I G+ + + + KG Sbjct: 338 AYGYMKDYPIERIFRDARVTTIYEGTSQILQTVIAKQVLKG 378 >gi|224540611|ref|ZP_03681150.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus DSM 14838] gi|224517769|gb|EEF86874.1| hypothetical protein BACCELL_05525 [Bacteroides cellulosilyticus DSM 14838] Length = 568 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + + + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKATFDEKENCWRLNGVKRFITNGDADLHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + T EL + N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKREGGVDVRRIENKLGIHGSPTCELVYKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L++A + YA+ R +I+ P + +A + + A Sbjct: 287 ALMNGARLGIAAQSVGLSQAAYNEGLAYAKDRKQFSKAIIEFPAVYDMLAIMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 AL ++ + D K+ R E+ Y+++ P+ K + A Sbjct: 347 ALLYQTSRYVDIYKALDDISRERKLTPEERQEQKKYSKLADAFTPLAKGMNSEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462 + ++ GGSG++ E + R YR++ SI G+ + + + G+ Sbjct: 407 DCIQIHGGSGFMLEYACQRIYRDARITSIYEGTTQLQTVAAIRYVTNGS 455 >gi|145476811|ref|XP_001424428.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391492|emb|CAK57030.1| unnamed protein product [Paramecium tetraurelia] Length = 397 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 16/239 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K+ D Y L+G K W + P++D ++ A+ E + Sbjct: 141 LAMSEPNAGSDVVSMKTTAKKVGDK-YILNGSKMWITNGPVADVIVVYAKTEPEKKQHGI 199 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + +KIG + + T + F N +LG++N G M L Sbjct: 200 TAFIVEAGMKGFSRGKKLDKIGMKCSDTAPIYFDNVEVPAENVLGEVN--KGVYVLMSGL 257 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 Y L A V M+ + + Y R G + +M+ +A++ + A+ A+ Sbjct: 258 DYERLVLAAGPVGLMQAAFDISREYCNTRQQFGKPIGQFQLMQGKLAEMYTTLQASRAML 317 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + ++ + D + + A A I Y+ A V EA++C+GG+GY +E + R Sbjct: 318 YSVSRAVDSGNITNTDCA-ALI------YYTSVNATQVGLEAIQCLGGNGYTQEYPVGR 369 >gi|110635609|ref|YP_675817.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110286593|gb|ABG64652.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 395 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 36/328 (10%) Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPT 186 +VR++ ++ A+ +L AG +M + L +T + + + P++ + ++ Sbjct: 84 LVREEISRVSASAAWLAGNNTAGGVMP--------LLLGSTEEMRRRYLPELATGKH--- 132 Query: 187 NKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIM 245 T +A ++E G+D++AI + + D Y ++G K F+SS P++ + Sbjct: 133 ------LTCIA----MSESDAGSDVSAIRTTAVRDGDH-YVVNGTKTFISSGPVASFGTV 181 Query: 246 LAQVEGRV--GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 LA+ G V G + D S G+ + K+G R T E+ F + +LG Sbjct: 182 LAKT-GPVSAGKDAISSFFFDASWKGISVGKKDRKLGMRGTPTGEIRFEDVRIPASHILG 240 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRA 358 G MK+L + + G+ A+ A+ Y + R G + D + A Sbjct: 241 G-GEGRGFALAMKVLNRNRPTVGAFGCGIARGAADYALAYTKERRAFGRAVYDFQATRFA 299 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 AD+ + I AA +L +R A D +A ++ + K + +M V AME Sbjct: 300 FADMYMQIEAARSLLYRTAYRLDS----DPDAPETECLSAMAKCFASEMCMRVAISAMEQ 355 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 +GG GY+ + + R R++ A L G+ Sbjct: 356 LGGHGYMVDHPLERMMRDAKALHFLEGT 383 >gi|28212011|ref|NP_782955.1| butyryl-CoA dehydrogenase [Clostridium tetani E88] gi|28204454|gb|AAO36892.1| butyryl-coA dehydrogenase [Clostridium tetani E88] Length = 379 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K GLTE GTD A S + D Y L+G K F+++ ++D ++ A Sbjct: 113 PLAKGEKIGAFGLTEPNAGTDAAGQQSIAIDMGDH-YLLNGSKIFITNGGVADVAVVFAM 171 Query: 249 VEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + +LE G P G ++++K+G R+++T EL F D+ V Sbjct: 172 TDRSKGTRGISAFILEKGMP-GFSVGKVEDKMGIRASSTTELIFE--------DVKV--- 219 Query: 308 PVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQP 353 P E++ K A+ ++ G R+ +A EAI Y + R G L Sbjct: 220 PKENLIGKEGRGFGIAMKTLDGGRIGIASQALGIAEGALEEAITYMKERKQFGRELYKFQ 279 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + +AD+ + I +A L ++ A SEEAA A++ A +A V Sbjct: 280 GLSWMMADMKVAIESARLLVYQAAWKKQNKLPYSEEAAMAKLHA-------ANVAMDVTT 332 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ GG GY ++ + R R++ I G+ Sbjct: 333 KVVQLFGGYGYTKDYPVERMMRDAKITEIYEGT 365 >gi|117928400|ref|YP_872951.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648863|gb|ABK52965.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus 11B] Length = 378 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 23/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGT--DIAAITSQGQKISDG-IYCLSGHKWFLSSPMS-DAFIM 245 P + + LTE GT DI + + DG Y L+G K ++ + D +++ Sbjct: 110 PQVAGDIRVAFTLTEPTAGTGADIRSTV-----VRDGDTYYLTGEKHLITFGVRCDYWLL 164 Query: 246 LAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 A+V G G V +++ SPN + + + +G R L F T + L Sbjct: 165 FARVAGTTGKDGTVALMVDRHSPN-VVVKEMSPSMGVRGTDHAHLIFRETPVPVANRLG- 222 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + G D+ +L + +SV+ V LA A+ YA++R G L D+ V+ A+ Sbjct: 223 AEGEGLDVAFGGFLTPSRISVAMTCVGLARRAQELAVEYAKQRVTFGKRLADRQVIAYAL 282 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A+ A DI AA L+ A ++ AA A ++ + K M V +A++ Sbjct: 283 AENATDIEAARQLTLYAARQWESG------AADALTLSSMAKLNAVDMLTRVTDKALQIH 336 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY + I R YR++ A G+ Sbjct: 337 GGIGYFQSSPIERVYRDARAQRFEEGT 363 >gi|197104750|ref|YP_002130127.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196478170|gb|ACG77698.1| isovaleryl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 388 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W ++P +D ++ A+ + + Sbjct: 131 LAMSEAGSGSDVVSMRLRAEKKGD-RYVLNGTKFWITNAPHADTLVVYAKTDPDADSRGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + ++G LN G + M L Sbjct: 190 TAFLIEKDFKGFRVSQKLDKMGMRGSDTGELVFEDCEVPEENVMGPLNGGVGVL--MSGL 247 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ M+ + + Y R R G + +M+ IAD+ + + +A A Sbjct: 248 DY-ERAVLAAGPLGIMQACMDVVLPYVRERKQFGKPIGSFQLMQGKIADMYVALNSARAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + +AA A +MA + A V EA++ +GG+GY +E + R Sbjct: 307 VYAVAKACDAGMTTRFDAAGAILMA-------SENAVKVALEAIQALGGAGYTKEYPVER 359 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 360 MLRDAKLYDIGAGT 373 >gi|302381945|ref|YP_003817768.1| acyl-CoA dehydrogenase [Brevundimonas subvibrioides ATCC 15264] gi|302192573|gb|ADL00145.1| acyl-CoA dehydrogenase domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 387 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 20/260 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255 + +TE G+D+ + + K +G Y ++G K F+++ +++ I++A+ + G G Sbjct: 131 IAMTEPGAGSDLQGVKTTAVKSGNG-YVINGSKTFITNGQLANFIIVVAKTDPAAGAKGT 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 L+ ++E G R +KIG N T EL F++ ++G G ++ M Sbjct: 190 SLI--VVETDGAEGFERGRNLHKIGMEGNDTSELFFNDVHVPADNIIGG-EEGRGFIQLM 246 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L L+ A+ ++ L E + Y ++R G +++ + +A++ + A Sbjct: 247 QQLPQERLNIAVQGIAAAERGLQETLAYVKQRKAFGKSVLEFQNTQFKLAEVKTKLTVAR 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 D + + A + KYW + VI E ++ GG GY+ E I Sbjct: 307 VF-------VDHCIGLHLKGQLDAVTASMAKYWVTDLQGEVIDEMLQLHGGYGYMNEYPI 359 Query: 431 ARHYRESPANSILLGSGNAM 450 A+ Y+++ I G+ M Sbjct: 360 AQLYKDARVQRIYGGTNEIM 379 >gi|226305242|ref|YP_002765200.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226184357|dbj|BAH32461.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 382 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T+ ++ D Y ++G K F++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGD-HYVVNGAKTFITSGVRADFVVTAVRTGGPGAGGVS 182 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G+P G R K+G R++ T EL F + L+G N + + Sbjct: 183 LLVIEKGTP-GFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + + L + + R R G LI + ++ + ++A I A + Sbjct: 242 ERVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHS 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + E +A+ A T W V +A++ GG GY++E + R Y Sbjct: 302 VIERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|310826162|ref|YP_003958519.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612] gi|308737896|gb|ADO35556.1| hypothetical protein ELI_0540 [Eubacterium limosum KIST612] Length = 379 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + + +G Y L+G K F+++ +D +I+ A + G Sbjct: 123 FGLTEPGAGTD--ASGQQTKAVLEGDHYVLNGTKIFITNGGKADVYIIFAMTDKSKGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G + K+G R ++T EL F + LLG G Sbjct: 181 ISAFIVEKDYPGFSIGTKEKKMGIRGSSTTELIFEDCIVPKENLLGKEGKGFGIA----- 235 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + LA E + Y + R G + + +AD+ I AA Sbjct: 236 MQTLDGGRIGIAAQALGLAQGAFDETVAYVKERKQFGRSIAKFQNTQFKLADMYARIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A + D K S EAA A++ A T A AV E ++ +GG GY + Sbjct: 296 RNLVYKAAIAKDTQKVFSVEAATAKLFAAET-------AMAVTTECVQLLGGYGYTRDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|229582640|ref|YP_002841039.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] gi|228013356|gb|ACP49117.1| acyl-CoA dehydrogenase domain protein [Sulfolobus islandicus Y.N.15.51] Length = 391 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 15/275 (5%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K + +TE GG+ I I ++ +K D Y +SG K F+++ P++D F++ A Sbjct: 126 PLLKGDKIAAIAMTEPTGGSLIEYIKTKAEKKGDQ-YIISGKKVFITNAPIADIFLVFAN 184 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL---LGDLNVS 305 + F++P +E GL + +K+G R E+ N + LG+ Sbjct: 185 TSNGITAFIIPSNVE-----GLKIGKPIHKLGLRGAVFSEVSLDNVIVSIENRLGEEGEG 239 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + I + +A +++ L + Y R + LID ++K IA+ Sbjct: 240 INIARHIFIGGRIIAAAIALGIGDAVLDQVYQYVISRELGNHKLIDFQILKEKIANFETI 299 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + ++ +A D+ + +A I+K + + + EA+ GG GY Sbjct: 300 LHMGKIYTYYVAYLMDKMPRQELNE-----LASISKLFTTEGVLNIANEAISIFGGYGYT 354 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +I ++R+ +I G+ + L + + L+K Sbjct: 355 DNLNIHMYWRDVKGLTITEGTSDIQRLIIQHELKK 389 >gi|89897467|ref|YP_520954.1| hypothetical protein DSY4721 [Desulfitobacterium hafniense Y51] gi|89336915|dbj|BAE86510.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 604 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 43/298 (14%) Query: 200 LGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEG-R 252 + LTE GTD+ A IT GIY + G+K F+++ + + FI +LA+ EG R Sbjct: 158 MNLTEPGAGTDVGANITKAFATDEPGIYKIKGNKLFITAGDHDLCENFIHLVLARTEGAR 217 Query: 253 VGC-----FLVPRLL--EDGSP---NGLCYQRLKNKIGNRSNATVELEF---SNTFGFLL 299 G F+VP+ +DGS N + ++ K+G + T L + N G+++ Sbjct: 218 PGTAGLSLFVVPKYWVNDDGSLGEFNDVITTGIEEKMGQHGSPTCSLTYGENDNCRGYII 277 Query: 300 GDLNVSTGP---VEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 GD +G + M +++ L++ I ++ + A YA+ R V G D Sbjct: 278 GDPPDESGKGQGIAQMFVMMNEERLNTGIQGLAAASQAFNLAREYAKIR-VQGTKFTDPK 336 Query: 354 VMKRAIAD-------IALD---IAAATALSFR------LANSFDEAKSRSEEAAYARIMA 397 K I + + L I A AL + L++ ++ R +I Sbjct: 337 GPKVRIVEHEDVRRMLMLQKSCIEAIRALILKSCYYLDLSHDSEDPAEREFADGMFQISN 396 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K + MA +IAEA++ GG GY+ E + + R+ SI G+ LD++ Sbjct: 397 PMCKAYATDMAWPLIAEAIQVHGGYGYVSEYQVEQAARDVKICSIWEGTNFIQSLDLV 454 >gi|294911653|ref|XP_002778031.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239886152|gb|EER09826.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 424 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 IF E + P IG GLTE G+D + + + +K+ DG + L G K W Sbjct: 144 IFGSEEQKSRWLPELAKGTKIGCFGLTEPNHGSDPSGMETTAKKV-DGGWKLHGSKNWIT 202 Query: 236 SSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +SP++D ++ A+ +G+V FLV + G+ ++ K R++ T + + Sbjct: 203 NSPIADVCVVWAKCDTDGQVRGFLV-----ETEWKGVSCPKILGKFSLRASPTGMILMDD 257 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348 F + + ++ G V L+SA + ++ + AE A Y R G Sbjct: 258 VF---VPEESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFGRP 314 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD +I + T ++ R DE K S + + K C A Sbjct: 315 LAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHSN-------VISMCKRNNCGKA 367 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 A+ EA + +GG+G ++E I RH Sbjct: 368 LAIAREARDMLGGNGIVDEYGIIRH 392 >gi|167897198|ref|ZP_02484600.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894] Length = 1293 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ VG +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQADGVG--MVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 + I G ++ +L +L + + LG G++ +++L E Sbjct: 989 ARLPRIFEGPTETLL----------AHLGSRLLNGGDDLLGYLGER-----SGALALAAE 1033 Query: 497 DKGLARFLTEK 507 +GL L E+ Sbjct: 1034 LRGLGEQLLEE 1044 >gi|126667848|ref|ZP_01738814.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] gi|126627664|gb|EAZ98295.1| Acyl-CoA dehydrogenase [Marinobacter sp. ELB17] Length = 388 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 132/290 (45%), Gaps = 37/290 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S E+ IG L ++E G+D+ ++ + D Sbjct: 110 TEEQKQQYLPKLLSGEH--------------IGALAMSEPNAGSDVISMKLSAKDAGDH- 154 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L+G+K W + P + +++ A+ + + G + ++E +P +Q+L +K+G R Sbjct: 155 YVLNGNKMWITNGPDAHVYVIYAKTDVKAGSKGITAFIVERDAPGFSRHQKL-DKLGMRG 213 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL F N G L G V ++ ++++ A + M+ ++ + Sbjct: 214 SNTCELVFQDCKVPKENILGQLGGGARVLMSGLDYERLVL----AGGPLGIMQAAMDVVV 269 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R R G + + +++ +AD+ + A + + +A S D ++ ++AA A + Sbjct: 270 PYIRERKQFGQAIGEFELVQGKVADMYTYMNTAKSYVYMVAQSADRGETTRKDAAGAIL- 328 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +MA + +A++ +GG+GY+ + R R++ I G+ Sbjct: 329 ------YSAEMATKLALDAIQLLGGNGYVNDYPTGRLLRDAKLYEIGAGT 372 >gi|110835523|ref|YP_694382.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] gi|110648634|emb|CAL18110.1| acyl-CoA dehydrogenase [Alcanivorax borkumensis SK2] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/381 (21%), Positives = 147/381 (38%), Gaps = 55/381 (14%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P +W+K E P L + +GL C V + + A L A Sbjct: 24 PHYNQWEKAEIFP--RELWNKMGENGLLC---------VDVPEEYGGFGANFRLSA---- 68 Query: 149 GHLMSPSVTSASMVALMTTPRVHKDW-APKIFSREYDPTNKA--PMQKTSVAIG-LGLTE 204 ++ + A +L + VH D AP I + K P T A+G +G+TE Sbjct: 69 --VIVEEASRAGFSSLASNISVHSDIVAPYILHLGNEEQKKTWLPKMVTGEAVGAIGMTE 126 Query: 205 KRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLE 263 G+D+ + ++ K DG Y ++G K F+++ D ++ + + G + Sbjct: 127 PGAGSDLQGLKARADKDGDG-YSINGQKTFITNGQHCDVIVLATKTDPNAGSKGMTLFTV 185 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPV 309 D + +G R K+G + T EL F N F L+ +L P Sbjct: 186 DCTLDGFARGRNLEKMGLHAADTSELFFENVKVGAEQILGGEGKGFANLMNEL-----PR 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E LI A+ + GM + I Y + R G + + +AD+ + Sbjct: 241 ER---LILALGAVAACEGM---IERTIEYTKERMAFGKPISSLQNTRFVLADLHAQVVIN 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +D ++ + A+ A++ A ++ V + ++ GG GY++E Sbjct: 295 RAYCEQCIEQYDRSELTATNASIAKLTA-------TELQGVVADKCLQLFGGYGYMQEYP 347 Query: 430 IARHYRESPANSILLGSGNAM 450 I+R Y ++ I G+ M Sbjct: 348 ISRDYVDARIQRIYGGTSEIM 368 >gi|157111111|ref|XP_001651395.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108878541|gb|EAT42766.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 402 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 21/255 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA++++ ++ G + L+G K W S+ + + I+ A ++ + + Sbjct: 140 FALSESDAGSDVAALSTKAKQ-DGGDWILNGSKAWVTSAKEAKSGIVFATIDPELKYKGI 198 Query: 259 PRLLED-GSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVE 310 L D + +GL R ++K+G R+++T L F SN G + G V+ ++ Sbjct: 199 TAFLIDFENLDGLKIGRNEDKLGIRASSTCGLHFNNVRIPGSNVLGKVGGGFRVAMEQLD 258 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 +I I S + +S + +L A YA +R G L ++ IA++A+ I A Sbjct: 259 RARIGIA--SQALGIS--QAALETASQYAEQRIAFGQPLSKLHSVQTRIAEMAVRIETAR 314 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + A D R ++A A MA K+ + A + +GG GY+++ Sbjct: 315 LLIRKAATEVD----RGQQATKAISMA---KWVAGETATFAAHNCQQIMGGMGYVKDMPA 367 Query: 431 ARHYRESPANSILLG 445 R+YR++ I G Sbjct: 368 ERYYRDARITEIYGG 382 >gi|309812263|ref|ZP_07706018.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] gi|308433568|gb|EFP57445.1| acyl-CoA dehydrogenase, C-terminal domain protein [Dermacoccus sp. Ellin185] Length = 384 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 41/311 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 VT+ +V+L T + K + P++ + E + + +G+TE GG+D+A + Sbjct: 94 DVTAPYIVSLGTEEQKQK-YLPRVATGE-------------LILSIGMTEPSGGSDLANL 139 Query: 215 TSQGQKISDGI--YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLC 271 S K DG + L+G K F+++ D ++ A+ + G + L + G Sbjct: 140 KSTAVKADDGSGDWILNGSKTFITNGHQCDVAVVAARTDPSKGAKGISLFLVEAGTEGFT 199 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVS 326 +K+G + T EL F N LLG ++ G + MK L + +AI +++ Sbjct: 200 KGNKLDKVGQVESDTSELFFDNVRLPADALLGPQDL--GFIAMMKHLPQERIGNAIANIA 257 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFD 381 + LAE I Y + R G QP+ IA++ I + A D Sbjct: 258 NAKQILAETIQYCKDRKAFG-----QPIGSFQHNTFKIAEMVTKIEVSEAY-------ID 305 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + + E + A K+W ++ V+ E ++ GG GY+ E +AR +R++ + Sbjct: 306 DCVAAHAEGKLTAVDAAKAKWWAAQVQCDVLDECVQLHGGYGYMNEYRVARAWRDARVHK 365 Query: 442 ILLGSGNAMVL 452 I GS M + Sbjct: 366 IWAGSNEIMKM 376 >gi|296127050|ref|YP_003634302.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM 12563] gi|296018866|gb|ADG72103.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM 12563] Length = 641 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 19/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + D Y L+G K F+++ + ++ +++ A +G + Sbjct: 124 FGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAETYVVFAVTTPGIGTRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R++AT +L F N + N+ + KI + Sbjct: 183 SAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNV---KVPKENLLGKEGQGFKIAMQT 239 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ Y++ R G + Q + +AD+A + AA L Sbjct: 240 LDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAFKLADMATKLRAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA- 431 + A D + E+A A++ + ++ V+ +A++ GG+GYI+ I Sbjct: 300 IYSAAAKKDRHEPYGTESAMAKL-------YASEIGLEVVNQALQIHGGNGYIKGAYIVE 352 Query: 432 RHYRESPANSILLGS 446 R YR++ +I G+ Sbjct: 353 RAYRDAKICTIYEGT 367 >gi|148656963|ref|YP_001277168.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148569073|gb|ABQ91218.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1] Length = 381 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 25/288 (8%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + W P+ S E + +TE G+D+AAI + + D +Y Sbjct: 104 TPDQRRRWLPRCVSGE-------------CITAIAMTEPGAGSDLAAIRTTALRDGD-VY 149 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 L+G K F+S+ ++D I+ A+ G + L+ + G R KIG + Sbjct: 150 LLNGQKTFISNGILNDLVIVAAKTNPEAGHKGISLLVVERDMPGYERGRRLEKIGLHAQD 209 Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 T EL F N LLG+ + + L A+ +V+ V+L + I Y R R Sbjct: 210 TAELFFHNVRVPRDHLLGEEGQGFRYLMEQLPRERLAIAVGAVAAAEVALEQTIRYCRER 269 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + ++ +A++ ++ + + + + +E AA A K+ Sbjct: 270 EAFGRPIGALQSVRFTLAELVTEVQIGRVFVDQCVLALNRGELTAETAAMA-------KW 322 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W ++ V+ ++ GG GY+ E IAR + ++ +I G+ M Sbjct: 323 WTTELQQRVVHACLQLHGGYGYMREYPIARAFLDARVQTIYGGTTEIM 370 >gi|318059984|ref|ZP_07978707.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG] gi|318079733|ref|ZP_07987065.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF] Length = 383 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D A+T++ + D + L+G K F+++ +D ++ A+ G Sbjct: 125 LTEPGTGSDAGALTTRAVRDGDD-WLLTGGKMFITNGTWADLALVFARSNDAPGHKGVSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGP 308 FLVP G+P G + L K+G R AT EL LLG +V+ Sbjct: 184 FLVP----TGTP-GFERRTLHGKLGLRGQATAELVLDGVRVPGSALLGPEGKGFSVAMSA 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ + A V + +L A+ +A+ R G + +++ +ADIALD+ A Sbjct: 239 LAKGRMSV----AAGCVGIAQAALDAALGHAKEREQFGKPIAGHQLVQELLADIALDVDA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++R+A+ D + + A+ A++ A + A A++ GG GYI+E Sbjct: 295 ARLLTWRVADLVDRGEPFTGAASRAKLFA-------SEAAVRAANNALQVHGGYGYIDEY 347 Query: 429 SIARHYRESPANSILLGS 446 + + R++ ++ G+ Sbjct: 348 PVGKLLRDARVMTLYEGT 365 >gi|221235191|ref|YP_002517627.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|220964363|gb|ACL95719.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus NA1000] Length = 386 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 39/290 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ + L ++E G+D+ ++ + +++ D Y Sbjct: 111 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQVGD-RY 156 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 L+G K W ++P +D ++ A+ EG G F+V + ++ G + +K+G R Sbjct: 157 ILNGTKFWITNAPHADTLVVYAKTGEGSRGITAFIVEKGMK-----GFSVSKKLDKMGMR 211 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAI 336 + T EL F + + + NV + +L+ + A+++ M+ L + Sbjct: 212 GSDTAELVFEDC---EIPEENVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDVVL 268 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R R G + +M+ IAD+ + + +A A + +A + D K+ +AA A +M Sbjct: 269 PYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGKTTRFDAAGAILM 328 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 329 A-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 371 >gi|126436328|ref|YP_001072019.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126236128|gb|ABN99528.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 382 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253 + +TE G+D+A + + + D Y ++G K F++ + +D +++A+ R Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDD-YIVNGAKTFITGGIQADLVVVVARTSTDPENRRR 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 G L+ ++EDG P G R K+G + T EL F++ LLG+ + + Sbjct: 183 GLSLI--VVEDGMP-GFERGRELEKMGCKVQDTAELSFTDVRVPAANLLGEEGEAFSYLG 239 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI-AAA 369 L A+ SV+ R +L I Y + R G + K +A ++ ++ AA Sbjct: 240 HNLAQERLTVAVGSVAQARSALHATIDYVKNRKAFGTPVASFQNTKFELAAVSTEVEAAQ 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T L + + D SR + A K +C +M + ++ GG GY+ E Sbjct: 300 TMLDRAVLDHVDGVLSREDAAR--------VKLFCTEMQARAVDRCLQLFGGYGYMMEYP 351 Query: 430 IARHYRESPANSILLGSGNAM 450 IAR Y ++ I G+ M Sbjct: 352 IARLYNDARVARIYAGTSEVM 372 >gi|56695494|ref|YP_165842.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56677231|gb|AAV93897.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 385 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 30/265 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 + +TE G+D+ A+ + +K + Y ++G K F+++ + D I++A+ + +G V Sbjct: 127 IAMTEPGTGSDLQAVRTTAEKDGNS-YRINGSKIFITNGQTADLIIVVAKTDKTLGSKGV 185 Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS----TGPVED-- 311 + LE G R K+G ++N T EL F D+ V GP E Sbjct: 186 SLIALETEGAEGFRRGRNLKKLGMKANDTAELFFE--------DVKVPMTNLIGPEEGHG 237 Query: 312 ----MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK L + L IM++ + +LAE + Y + R G ++D + Sbjct: 238 FYQLMKQLPWERLTIGIMALGAIDFALAETVKYVQERKAFGQRVMD-------FQNTRFK 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 +A + L + ++ R E A + KY+ ++ ++ E ++ GG G++ Sbjct: 291 LAECKTKAEVLRSFVNDCIGRLEAGQLDAATASMVKYYGSEVQNEIMHECLQLFGGYGFM 350 Query: 426 EERSIARHYRESPANSILLGSGNAM 450 E IAR Y ++ I G+ M Sbjct: 351 MEYPIARLYADARVQMIYGGTNEVM 375 >gi|83945478|ref|ZP_00957825.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83851054|gb|EAP88912.1| isovaleryl-CoA dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 390 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 26/266 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMRLKAVKKGDH-YVLNGNKMWITNGPSADTLVVYAKTDPEAGSKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + G + V Sbjct: 190 TAFLIEKGMKGFSIAQKLDKLGMRGSETGELVFEDCEVPEENVLGQVGGGVRVL------ 243 Query: 312 MKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M L Y + + S V M+ + + Y R G + + +++ IAD+ + A+ Sbjct: 244 MSGLDYERAVLASGPVGIMQACMDVVMPYVHERKQFGQPIGEFQLIQGKIADMYTRMNAS 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D K+ ++AA + A C +A++ +GG+GYI E Sbjct: 304 RAYVYAVAQACDAGKTTRQDAAGVILFAAEAATQCA-------LDAIQILGGNGYINEYP 356 Query: 430 IARHYRESPANSILLGSGNAMVLDVL 455 R R++ I G+G + V +L Sbjct: 357 TGRLLRDAKLYEI--GAGTSEVRRML 380 >gi|332308288|ref|YP_004436139.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175617|gb|AEE24871.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 384 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/286 (22%), Positives = 131/286 (45%), Gaps = 26/286 (9%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP + +G++E G+D+A + + + D Y ++G K W ++ +D +LA Sbjct: 112 APAVAGEMVACIGVSEPGAGSDVAGLKTTAKSDGDD-YVINGSKMWITNATQADWICLLA 170 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 EG V ++ +P G+ + NK+G R++ T ++ F++ +G+ N Sbjct: 171 NTSEGNVHTNKSLIVVPLDTP-GIEISKPLNKLGMRASDTGQIFFNDVRVPKRHCIGEEN 229 Query: 304 VSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 M+++ + + + + + GM + I + + RH G +++ V+ + Sbjct: 230 KGF----TMQMMQFQEERMYAAASAHKGMERMIQNTIEWCKERHTFGQPVLNNQVVHFRL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++ A AL++R + E+A Y +A + K ++ V ++ Sbjct: 286 AELQTEVEALRALTWRAC----QQHVNGEDATY---LASMAKLKSGRLWREVTDSCLQYW 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 GG G++ + IAR YR++ SI GS M L ++ K ++F Sbjct: 339 GGMGFMWDNPIARAYRDTRILSIAGGSDEMM----LGIIAKHMDIF 380 >gi|262368204|ref|ZP_06061533.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] gi|262315882|gb|EEY96920.1| acyl-CoA dehydrogenase [Acinetobacter johnsonii SH046] Length = 431 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 28/227 (12%) Query: 223 DGIYCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 DG Y + G K L + +D F++ A++ G+ F++ R + +++ +G Sbjct: 221 DGQYFIQGEKTLVLLAESADIFLVNAELNGQAEVFILRR------DESIQFKK-SPAMGL 273 Query: 282 RSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI----- 336 ++ T L F+ T LGD ED +LD + M V EAI Sbjct: 274 KATETATLIFNQTPALRLGD--------EDFNYTAFLDLGNLMWCSMAVGTCEAIKKYCI 325 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA R G + + + IAD+A++I A L A+ + ++ EA AR++ Sbjct: 326 EYANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAESGQTFHREAYLARLL 385 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 C + + + + ++ +GG G+ +E + R YR+ A +I+ Sbjct: 386 -------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIV 425 >gi|226954432|ref|ZP_03824896.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226834781|gb|EEH67164.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 600 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 34/288 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ I ++ + SDG Y ++G K F+S+ D I+LA++ G Sbjct: 166 LTESHAGSDLGIIRTKAEPQSDGSYAITGEKIFISAGEHDMAENIVHIVLARLPGAPKGT 225 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + G N + +++K+G NAT + F G+L+G N Sbjct: 226 KGISLFIVPKFNVNADGSLGERNAVRCGSIEHKMGIHGNATCVINFDKAKGYLIGPENRG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSG--------GILIDQP 353 + + +A+ ++ S A+ YA+ R +SG +I P Sbjct: 286 LNCMFTFMNTARIGTAVQGLAASEGSFQGALAYAKDRLAMRSLSGPKAPEKEADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA----RIMAPITKYWCCKM 407 ++ + AL L+ D E + E+ ++ ++ PI K + + Sbjct: 346 AVRNMLLTQKAFAEGGRALVHLLSLHADIVEQGATEEDRKFSDNILSLLTPIAKAFLTET 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ GG G+I E + + R++ + G+ LD+L Sbjct: 406 GYESANHGVQIFGGHGFISEHGMEQIVRDTRIACLYEGTTEIQALDLL 453 >gi|91225739|ref|ZP_01260768.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] gi|91189628|gb|EAS75903.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 12G01] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G+K W + P +D ++ A+ + G + Sbjct: 130 LAMSEPNAGSDVISMQLKAENKGDH-FVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G + + +K+G R + T EL F++ +LG+LN VE + Sbjct: 189 TAFIIERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ IAD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHEREQFGKPIGEFQLVQGKIADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 306 VYTVAAACDRGNATRKDAAGAIL-------YSAELATQMALDAIQLLGGNGYINEYPAGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|326383653|ref|ZP_08205339.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326197737|gb|EGD54925.1| acyl-CoA dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 387 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 31/250 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 LTE G++ A + ++ + +G + + G K F++ +P ++ F+ A+ + Sbjct: 122 LTEPGAGSNPAGLRTKAVRQENGDWVIDGSKCFITNAPTANLFVTFARTRAADADGPGIA 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 FLVP G G+ K+G + T ++ F + G ED+ Sbjct: 182 VFLVP-----GDTPGISVADHDRKMGQEGSWTADVHFDG----VRVPATALVGGSEDVGY 232 Query: 313 -KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS----GGILI-DQPVMKRAIADIALDI 366 ++ L + +SG+ V A+ RH + GG I D +++ +AD+ + Sbjct: 233 RAAMVSLARGRVHISGLAVGAAQRALDESLRHAAVTTQGGTPIGDFQLVQAHLADMQTQL 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A AL+ A AK SEE RI + K +C +M V +A++ GGSGY+ Sbjct: 293 MAGRALARDAA-----AKWVSEEDR--RIAPSVAKLFCTEMVGEVADKAVQIHGGSGYMR 345 Query: 427 ERSIARHYRE 436 E + R YR+ Sbjct: 346 EMPVERIYRD 355 >gi|294942138|ref|XP_002783395.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239895850|gb|EER15191.1| Glutaryl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 424 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 IF E + P IG GLTE G+D + + + +K+ DG + L G K W Sbjct: 144 IFGSEEQKSRWLPELAKGTKIGCFGLTEPNHGSDPSGMETTAKKV-DGGWKLHGSKNWIT 202 Query: 236 SSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +SP++D ++ A+ +G+V FLV + G+ ++ K R++ T + + Sbjct: 203 NSPIADVCVVWAKCDTDGQVRGFLV-----ETEWKGVSCPKILGKFSLRASPTGMILMDD 257 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348 F + + ++ G V L+SA + ++ + AE A Y R G Sbjct: 258 VF---VPEESLLPGVVGMKGPFACLNSARLGIAWGVIGAAEYCMETARGYTMDRKQFGRP 314 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD +I + T ++ R DE K S + + K C A Sbjct: 315 LAANQLIQKKLADQLTEIHSMTLMAHRATQLKDEYKLHSN-------VISMCKRNNCGKA 367 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 A+ EA + +GG+G ++E I RH Sbjct: 368 LAIAREARDMLGGNGIVDEYGIIRH 392 >gi|254419633|ref|ZP_05033357.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196185810|gb|EDX80786.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 22/269 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + + D Y L+G K F+S + SD ++++ + G + Sbjct: 124 LTEPGSGSDAAALRTTAVRDGDH-YVLNGSKAFISGAGTSDVYVVMVRTGGEGPKGVSAI 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMK 313 + E G+P GL + + K+G + T ++F + LLGD + ++ + Sbjct: 183 VAEAGTP-GLSFGAQERKMGWNAQPTAIVQFDDCRVPVANLLGDEGAGFRYAMAGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G R++L A Y R G + + V++ +AD+A D+ A + Sbjct: 242 LNI----AACSLGGARLALETAQDYVATRKQFGRPIGEFQVLQFRLADMATDLEAGRLMV 297 Query: 374 FRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R A + D + +++ A A+ +A C ++A EA++ GG GY+++ + R Sbjct: 298 LRGAWAIDTDHPGKTKWCAMAKRLATDA---CFQIAD----EALQLHGGYGYLKDYPLER 350 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ + IL G+ M + + L +G Sbjct: 351 IVRDLRVHRILEGTNEIMRVIIARELARG 379 >gi|118465257|ref|YP_881753.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118166544|gb|ABK67441.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 45/300 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223 +TT + W PK S EY IG + ++E G+D+A I + + D Sbjct: 102 LTTEEQKERWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147 Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+S+ + ++ A G L+ ++EDG G R +KI Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203 Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330 G S T EL F + L+G+LN VS P E + + Y ++ R Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L YA R G + V + +A++ + AA + S ++ ++A Sbjct: 258 ALDLTKTYASERTAFGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ +I ++ GG GYI E +AR +R+S + G+ M Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370 >gi|86141700|ref|ZP_01060224.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217] gi|85831263|gb|EAQ49719.1| Acyl-CoA dehydrogenase-like [Leeuwenhoekiella blandensis MED217] Length = 392 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G++ + + + D Y L+G K W ++P +D ++ A+ E GR+ + Sbjct: 136 FGLTEPDHGSNPGGMVTNFKDKGDH-YLLNGAKMWISNAPFADIAVVWAKDESGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G NK R++AT EL F N + N+ L+ Sbjct: 195 VERGME-----GFSTPTTHNKWSLRASATGELIFDNV---KIPKENLLPNKSGLGAPLMC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ YA+ R G + + ++ +A++ +I A L Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYAKEREQFGKPIGSFQLQQKKLAEMITEITKAQLL 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++RL +E K+ S + + A K +MA + EA + +GG G E SI R Sbjct: 307 AWRLGALRNEDKATSAQISMA-------KRNNVEMALKIAREARQILGGMGITGEYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|269967505|ref|ZP_06181561.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] gi|269827887|gb|EEZ82165.1| putative acyl-CoA dehydrogenase [Vibrio alginolyticus 40B] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G+K W + P +D ++ A+ + G + Sbjct: 130 LAMSEPNAGSDVISMQLKAENKGDH-FVLNGNKMWITNGPDADVVVLYAKTDVSAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G + + +K+G R + T EL F++ +LG+LN VE + Sbjct: 189 TAFIIERNFAGFTHAQKLDKLGMRGSNTCELVFNHCVVPKENILGELNQG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ IAD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHEREQFGKSIGEFQLVQGKIADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 306 VYTVAAACDRGNATRKDAAGAIL-------YSAELATQMALDAIQLLGGNGYINEYPAGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|194016026|ref|ZP_03054641.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061] gi|194012381|gb|EDW21948.1| acyl CoA dehydrogenase [Bacillus pumilus ATCC 7061] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 25/256 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D + + QK Y L+G K W ++D FI++A+ +V FLV Sbjct: 120 FALSEPNIGSDANHVETSYQKEGQS-YVLNGKKKWISFGAIADFFIVIARDGEQVTAFLV 178 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE---DMKIL 315 R G+ +R+ + NR++ E+ T + + GPV + + Sbjct: 179 DR-----DQPGVEIERITGMMANRASYLAEI----TLDHVQVHEDCVLGPVGGGFNHVVS 229 Query: 316 IYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + LD SV+ +++A+ + Y+R+R L ++K I D + AA Sbjct: 230 LALDHGRYSVAWAGLAIAQEAVDSLVTYSRKRTQFNEKLYKHQMIKGMIGDAVTQLHAAR 289 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL + A EA A I KY+ K+A + ++ GGSG+ E S Sbjct: 290 ALCLK-AGEMREANHPD-----AITETSIAKYFTSKIAVDITNTNVQIHGGSGFSRENSA 343 Query: 431 ARHYRESPANSILLGS 446 +R YRE+ I+ G+ Sbjct: 344 SRLYREAKVLEIIEGT 359 >gi|78060442|ref|YP_367017.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77964992|gb|ABB06373.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 383 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 32/252 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A++ + + D Y ++G K F++ +P + F ++A+ G Sbjct: 122 FALTEPESGSDAASLRTTAIRDGDD-YVVNGTKRFITNAPHAGIFTLMARTNPEDKGSGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+V D G+ + + K+G + T ++ F N L+G G Sbjct: 181 ISAFIV-----DAKTPGISFGKRDKKMGQKGAHTCDVIFDNVRVPAANLIGGKE-GQGFK 234 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D + ++ + V++AE A+ YA R G + D +++ +AD Sbjct: 235 TAMKVL---DKGRIHIAAVCVAVAERMLSMALSYAMERKQFGKPIADFQLVQAMLADSKA 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA + A D S EA+ A++ A +M V A++ GG+GY Sbjct: 292 EIYAARCMVVDAARRRDAKLPVSTEASCAKLFA-------SEMCGRVADRAVQIFGGAGY 344 Query: 425 IEERSIARHYRE 436 + E I R YR+ Sbjct: 345 MAEYGIERFYRD 356 >gi|84495355|ref|ZP_00994474.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84384848|gb|EAQ00728.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 387 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 34/277 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P T +G + +TE G+D+ I + ++ D Y ++G K F+++ +++ Sbjct: 121 PRMATGELVGAIAMTEPSTGSDLQRIRTTAKRDGDH-YVINGSKTFITNSSHAGLVVIVA 179 Query: 249 VEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 G G V ++ E G R+ KIG T EL F++ G LLGD Sbjct: 180 RTGGEGAQGVSLIVAEVDGLEGFERGRVLQKIGQHGQDTRELSFTDMLVPVGNLLGD--- 236 Query: 305 STG----------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 S G P E + I A+ +V+ ++ AI Y++ R G + Sbjct: 237 SEGQGFYQLMLQLPQERLAI------AVGAVASAEKAVELAIAYSKEREAFGKPIGSFQT 290 Query: 355 MKRAIADIALDI-AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +A+++ D+ AA T L + + + R + A +R KYW + VI Sbjct: 291 LRFTLAEVSTDVLAARTFLDYCIGL---HVEGRLDAATASR-----AKYWTTDVQCDVID 342 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR Y + I G+ M Sbjct: 343 RCLQVFGGYGYMLEYPIARMYAGARVQKIYGGTNEIM 379 >gi|91977767|ref|YP_570426.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91684223|gb|ABE40525.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 381 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 23/268 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ ++ G G + L Sbjct: 124 LTEPGSGSDAAALRTRAVRDGDD-YVLNGQKQFISGAGANDLYVVMVRTGGDGPGGISTL 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI-- 316 + D GL + + K+G + T + F N LGD + KI + Sbjct: 183 VVDKDTPGLSFGANERKMGWNAQPTRSVIFENARVPVANRLGDEGIG------FKIAMAG 236 Query: 317 ----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+ A S+ G + +L +A+ Y + R G L + ++ IAD+A ++ AA Sbjct: 237 LDGGRLNIAACSLGGAQSALDKALGYMKDRKAFGKRLDEFQALQFRIADMATELEAARTF 296 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + D + + + + K + + V +A++ GG GY+ E + + Sbjct: 297 LWRAAAALDRKDLDASK------LCAMAKRFGTDVGFNVANDALQMHGGYGYLAEYGVEK 350 Query: 433 HYRESPANSILLGSGNAMVLDVL-NLLE 459 R+ + IL G+ M L V LLE Sbjct: 351 IVRDLRVHQILEGTNEIMRLIVARKLLE 378 >gi|193078427|gb|ABO13413.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 387 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + I DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAIRDGDNYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQENAGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ + EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377 >gi|195377629|ref|XP_002047591.1| GJ13529 [Drosophila virilis] gi|194154749|gb|EDW69933.1| GJ13529 [Drosophila virilis] Length = 414 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y L+G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVLNGTKMWISNSDVAGVFLVFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T + F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + + V LA+ I Y R G + + M+ IA I Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATI 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA L++ A + +EAA A K++ ++A + ++ +GG Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCIDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR++ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCVKK 410 >gi|156357138|ref|XP_001624080.1| predicted protein [Nematostella vectensis] gi|156210834|gb|EDO31980.1| predicted protein [Nematostella vectensis] Length = 422 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 39/287 (13%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S E+ IG L ++E G+D+ ++ + K D Y L+G Sbjct: 146 RKYLPKLLSGEH--------------IGALAMSEANAGSDVVSMKLRADKDGDH-YVLNG 190 Query: 231 HK-WFLSSPMSDAFIMLAQV-------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 HK W + P +D I+ A+ E + FLV E G P G +K+G R Sbjct: 191 HKMWITNGPDADVLIVYAKTNPSSKKPEHAITTFLV----EKGMP-GFSTSPKLDKLGMR 245 Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 + T EL F N ++G++N + + L A V M+ L + Y Sbjct: 246 GSNTCELVFDNCRIPAENVMGEVNKGVYVLMSGLDIERLILAAGPVGLMQACLDVTVPYL 305 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + + +M+ +AD+ + A + + +A + D +++ A A I+ Sbjct: 306 HARTAFGQKIGEFQMMQGKMADMYTRLNACRSYLYTVARACDAGHISNKDCA-AIIL--- 361 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V +A++C+GG+GYI + R R++ I G+ Sbjct: 362 ---YTAENATQVALDAIQCLGGNGYINDYPTGRFLRDAKLYEIGAGT 405 >gi|150025259|ref|YP_001296085.1| acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum JIP02/86] gi|149771800|emb|CAL43274.1| Acyl-CoA dehydrogenase family protein [Flavobacterium psychrophilum JIP02/86] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 118/257 (45%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+A + + K + + ++G K F+++ + +D +++ A+ +G + Sbjct: 125 LCVTEPFGGSDVAGMRTTAVKQGNK-FIINGSKTFITNGIYADYYVVAAKTSPELGNKGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L D + G+ +L +K+G R++ T E+ F N L+G+ + Sbjct: 184 SIFLVDTNLKGITATKL-DKLGWRASDTAEIAFDNVEIPEENLMGEQGKGFPYIMQHFAF 242 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L AI + + ++ I+Y +R G + ++ I + A +I ++ Sbjct: 243 ERLIMAINAHARAEYAIEYTINYMSQREAFGTTINKFQALRHTIVEHATEIEHCKIFNYA 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 D+ + +EA A++ + K+A I + ++ +GG GY+EE +AR R Sbjct: 303 ATARLDQGEYVVKEATMAKLKS-------TKVADLAIYDCLQMLGGYGYMEEYPLARLLR 355 Query: 436 ESPANSILLGSGNAMVL 452 +S I G G + +L Sbjct: 356 DSRLGPI--GGGTSEIL 370 >gi|282878200|ref|ZP_06286996.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella buccalis ATCC 35310] gi|281299618|gb|EFA91991.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella buccalis ATCC 35310] Length = 574 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 24/289 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKASYDEKEDCWRLNGVKRFITNGDSDIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + ++NK+G + T EL + N L G + G ++ + L Sbjct: 231 RGLSMFIYDKRNGGVDVRHIENKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMAL 288 Query: 316 I---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A SV + + EA+ YA+ R G +I+ P + ++ + + A +L Sbjct: 289 MNGARLGIAAQSVGVEQEAYNEALAYAKERQQFGQAIIEFPAVYDMLSRMKAKLDAGRSL 348 Query: 373 SFRLANSFD--------------EAKSRSEEAAYARI---MAPITKYWCCKMAPAVIAEA 415 ++ A D A+ R+E Y R+ P+ K + A +A Sbjct: 349 LYQTARYVDLYKALEDIQRDRKLSAEERAEMKKYTRLADAFTPLAKGMNSEYANENAYDA 408 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GGSG+I R +R++ SI G+ V+ + + GT L Sbjct: 409 ISVHGGSGFIMAYKSQRLFRDARIFSIYEGTTQLQVVAAIRYIMNGTYL 457 >gi|294886647|ref|XP_002771802.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239875564|gb|EER03618.1| acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 436 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 25/266 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGC 255 + L +TE G+D+A I + DG Y ++G K F++S P +D F A G G Sbjct: 175 LALAVTEPYAGSDVANIRTTAVLQPDGKHYLVNGMKTFITSGPWADYFTT-AVGSGDSGL 233 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L L+ D + G+ RL + G +S+ T + F + L+G + Sbjct: 234 SL---LMIDRTLPGVATTRLSTQ-GWKSSGTARITFEDVKVPIEMLIGRRGHGFKAIMHN 289 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A+ S R+ + +AI YA+ R G LID V++ IA++A + A Sbjct: 290 FNHERLMLALQSCRHARICMEDAIRYAKTRRTFGKRLIDHQVIRHKIAEMARRVLATHYY 349 Query: 373 SFRLANSFDEAKSRSE---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +A + ++ S+SE + A ++ A T +C + EA + +GG Y++ Sbjct: 350 IENIAIQWPQS-SQSELAGKVALLKVQATKTFEFCAR-------EASQVLGGRSYLQGSG 401 Query: 430 ----IARHYRESPANSILLGSGNAMV 451 I R YRE N+I GS M+ Sbjct: 402 PGARIERLYREVRVNAIGGGSEEIML 427 >gi|212636203|ref|YP_002312728.1| isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3] gi|212557687|gb|ACJ30141.1| Isovaleryl-CoA dehydrogenase [Shewanella piezotolerans WP3] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 138/308 (44%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R + KA P T IG L ++E Sbjct: 76 HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNSEQKAKYLPKLITGEHIGALAMSEP 135 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + + + Sbjct: 136 NAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGAHGITAFIVE 194 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G + +K+G R + T EL F + + N+ G +K+L+ LD + Sbjct: 195 RGFKGFTQAQKLDKLGMRGSNTCELVFEEC---EVPEENILGGLNNGVKVLMSGLDYERV 251 Query: 324 SVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 +SG + + A + Y R G + +++ +AD+ + AA + + +A Sbjct: 252 VLSGGPLGIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYIYNVAK 311 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R R++ Sbjct: 312 SCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364 Query: 439 ANSILLGS 446 I G+ Sbjct: 365 LYEIGAGT 372 >gi|167921798|ref|ZP_02508889.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215] Length = 1293 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ VG +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQADGVG--MVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKE 496 + I G ++ +L +L + + LG G++ +++L E Sbjct: 989 ARLPRIFEGPTETLL----------AHLGSRLLNGGDDLLGYLGER-----SGALALAAE 1033 Query: 497 DKGLARFLTEK 507 +GL L E+ Sbjct: 1034 LRGLGEQLLEE 1044 >gi|85858915|ref|YP_461117.1| acyl-CoA dehydrogenase [Syntrophus aciditrophicus SB] gi|85722006|gb|ABC76949.1| acyl-CoA dehydrogenase, long-chain specific [Syntrophus aciditrophicus SB] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 23/266 (8%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG 254 + +G+TE G+D+AAI + D I L+G K F+S+ ++ I+L + V Sbjct: 127 DIITAIGMTEPNTGSDLAAIRTTAVADRDEI-VLNGQKTFISNGINCDLIVLVARDPAVE 185 Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304 + L+E G+P G R KIG S T EL F +N G Sbjct: 186 DPHKAIDLYLVEAGTP-GFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGTGFRK 244 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 ++ ++++ + + +M+ L I Y R R V G + + A++A Sbjct: 245 MMEMLQQERLVVAIGAQVMA----EFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMAT 300 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I ++ E + + E + A KYW MA V ++ GG GY Sbjct: 301 EIEIGRTFLDKMIVEHMEGRDLTREMSMA-------KYWITDMAGRVADRCLQLHGGYGY 353 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 EE IAR +R+ I GS M Sbjct: 354 CEEYPIARAWRDIRIMRIYAGSNEIM 379 >gi|16124334|ref|NP_418898.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus CB15] gi|221233016|ref|YP_002515452.1| long-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|13421178|gb|AAK22066.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus CB15] gi|220962188|gb|ACL93544.1| acyl-CoA dehydrogenase, long-chain specific [Caulobacter crescentus NA1000] Length = 391 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 44/276 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGC 255 + +TE G+D+ I + +K + Y ++G K F+++ + I ++A+ + G G Sbjct: 131 IAMTEPGAGSDLQGIKTTAKKAGNQ-YVINGSKTFITNGQTANLICVVAKTDPAGGARGT 189 Query: 256 FLVPRLLEDGSPNGLC--YQRLKN--KIGNRSNATVELEFSNT---------------FG 296 L+ +E P+GL ++R +N K+G + T EL F++ F Sbjct: 190 SLI--FVETDGPDGLLEGFERGRNLDKLGQEAQDTSELFFNDVKVPTENLLGTDEGQGFF 247 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+G L P E + I A+ ++ + +L I Y + R G +ID + Sbjct: 248 QLMGQL-----PQERLNI------AVQGMATIERALELTIAYVKDRKAFGKAIIDFQNTQ 296 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A+ + A E K + A+ A KYW + ++ + Sbjct: 297 FVLAECKTEATVAKVFVNHCIGQHLEGKLDAATASMA-------KYWVSDLENKIVDRCL 349 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + GG G++ E IAR Y++S I G+ M L Sbjct: 350 QLFGGYGFMNEYPIARMYKDSRIQRIYGGTNEIMKL 385 >gi|254472292|ref|ZP_05085692.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062] gi|211958575|gb|EEA93775.1| glutaryl-CoA dehydrogenase [Pseudovibrio sp. JE062] Length = 399 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255 GLTE G+D A + ++ K G Y ++G K W +SP++D F++ A+ E ++ Sbjct: 141 FGLTEPDAGSDPAGMRTRAVKTESG-YRITGSKMWISNSPIADVFVVWAKSEAHDNQIRG 199 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + +E GL +++ K+ R++ T E+ N LL +++ GP Sbjct: 200 FVLEKGME-----GLSAPKIEGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP---- 250 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y R L + ++ +AD+ +I+ Sbjct: 251 --FGCLNRARYGISWGALGAAEDCWMRARQYGMDRKQFNRPLAQTQLFQKKLADMQTEIS 308 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ FDE + E M I K C A + +A + GG+G EE Sbjct: 309 LGLQASLRVGRLFDEGRVAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEE 361 Query: 428 RSIARH 433 + RH Sbjct: 362 FMVMRH 367 >gi|148225687|ref|NP_001086623.1| glutaryl-CoA dehydrogenase [Xenopus laevis] gi|50603795|gb|AAH77194.1| Gcdh-prov protein [Xenopus laevis] Length = 440 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 37/249 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256 GLTE G+D A + ++ + S Y L+G K W +SP++D ++ A E GRV F Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGSKTWITNSPIADLCVVWAVCEDGRVRGF 238 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 L+ R GL ++K K R++AT VE+ N LL ++ GP Sbjct: 239 LIER-----GTKGLSTPKIKGKFSLRASATGMILMEDVEIPEEN----LLPKISGMGGPF 289 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 L++A +S + AE + R++ I P+ +++ +AD+ Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI RL DE ++ E M + K C A + +A + +GG+G Sbjct: 344 DITIGLQACLRLGRLKDEKRAAPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396 Query: 425 IEERSIARH 433 +E I RH Sbjct: 397 SDEYHIIRH 405 >gi|325193598|emb|CCA27878.1| mediumchain specific acylCoA dehydrogenase putative [Albugo laibachii Nc14] Length = 423 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 29/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255 +TE G+D+AA+ + K D + ++G K W + ++D + +LA+ + Sbjct: 165 VTEPGAGSDVAALRTSAVKKGDK-WVINGTKMWITNGSVADWYFVLAKTDANAKARKAFS 223 Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+V D + G+ R + +G R + T + F + + N+ P + +I Sbjct: 224 GFIV-----DANSPGITVGRKEINMGQRCSDTRSITFEEV---AVPEANLLGQPGDGFRI 275 Query: 315 LIYL------DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + AI+SV R + EA Y+ R G + + +AD+A I A Sbjct: 276 AMQAFDITRPPVAIISVGLARRAFEEAQKYSMERKTMGAPIATHQAVSFMLADMATGIEA 335 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 LS+R A D +S + + A + K + A A+A++ GG+G+ E Sbjct: 336 GRMLSYRAAYELDCGRSNT-------LYASMAKRFAADHANQCAADAVQIFGGAGFNTEY 388 Query: 429 SIARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 389 PVEKLMRDAKILQIYEGT 406 >gi|313231691|emb|CBY08804.1| unnamed protein product [Oikopleura dioica] Length = 411 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 21/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-CFL 257 L ++E G+D+ ++ + K D + L+G K W + P +D I+ A+ + Sbjct: 151 LAMSETGSGSDVMSMKIRADKKGDH-WILNGTKMWITNGPTADTMIIYARTDQDCKPAHG 209 Query: 258 VPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + + DG+ G C QRL +K+G R + T EL F N + + N+ G + +L+ Sbjct: 210 ITAFIVDGNAEGFHCAQRL-DKLGMRGSPTGELVFENV---AVHEDNILGGIGQGAYVLM 265 Query: 317 Y-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + +SG V L +A I YA R G + + +++ IAD+ ++A+ Sbjct: 266 SGLNLERLVLSGGPVGLMQAACDVAIPYAHERKQFGKPIGEFQLVQGKIADMYTTLSASR 325 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +++A + D + + A + + + A V +A++ +GG+GYI + Sbjct: 326 SYLYQVARAADNGHFNNADCAGIIL-------YTAEKATQVCLDAIQILGGNGYINDYPT 378 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 379 GRFLRDAKLYEIGAGT 394 >gi|325676114|ref|ZP_08155795.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553024|gb|EGD22705.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 391 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 32/257 (12%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR- 252 +V LTE G++ A + ++ ++ S G + L G K F++ +P++D F++ A+ Sbjct: 122 AVVASFALTEPGAGSNPAGLRTKAER-SGGEWVLDGEKRFITNAPIADLFVVFARTRPAD 180 Query: 253 -----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + FLVP G+ K+G T ++ F G + D + G Sbjct: 181 EKGPGIAVFLVP-----ADTPGVTVGAKDAKMGQEGAWTADVHFD---GVRVPDTAL-VG 231 Query: 308 PVEDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 ED+ + S A ++V + +L E++ YA G + + +++ I Sbjct: 232 GNEDIGYRAAMTSLARGRVHIAALAVGAAQRALDESVAYAATATQGGTPIGNFQLVQAMI 291 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD + A AL A ++ + R RI + K +C +MA V A++ Sbjct: 292 ADQQTQVMAGRALVRDAARAWVSGEDR-------RIAPSVAKLFCTEMAGRVADLAVQVH 344 Query: 420 GGSGYIEERSIARHYRE 436 GGSGY+ E + R YR+ Sbjct: 345 GGSGYMREVPVERIYRD 361 >gi|295695450|ref|YP_003588688.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411052|gb|ADG05544.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 32/251 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 GLTE G+D A+ T + DG + L+G K F+++ +++ V R + Sbjct: 123 FGLTEPGAGSD-ASGTRTTAVLEDGFWRLNGSKNFITNAGYARSVVVTAVTDREKGAKGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+VP G K+G R + TVE T LLG + Sbjct: 182 SAFIVPT-----DNPGFRVTTTYEKLGLRGSNTVEFVLDETVIPEDHLLGAVGEGY---- 232 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALD 365 + LI LD +S+ + V +A A + YA+ R G + ++ +AD+A+ Sbjct: 233 -KQFLITLDGGRISIGALSVGIARAAYEAALSYAKERVQFGRSISKFQAIQFKLADMAMH 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + + A D+ + +EAA A++ A +MA +A++ GG GY+ Sbjct: 292 IEMARTMVLKAAWLKDQGRPFKKEAAMAKLFA-------SEMAMRTCDQAIQIHGGYGYM 344 Query: 426 EERSIARHYRE 436 ++ + R++R+ Sbjct: 345 KDYPVERYFRD 355 >gi|126436719|ref|YP_001072410.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS] gi|126236519|gb|ABN99919.1| isovaleryl-CoA dehydrogenase [Mycobacterium sp. JLS] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 45/300 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223 +TT W PK S EY IG + ++E G+D+A I + + D Sbjct: 102 LTTDEQKARWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147 Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+S+ + ++ A G L+ ++EDG G R +KI Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203 Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330 G S T EL F + L+G+LN VS P E + + Y ++ R Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L YA R G + V + IA++ + AA + S ++ ++A Sbjct: 258 ALDLTKAYALERTAFGQPIGKFQVNRHFIAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ +I ++ GG GYI E +AR +R+S + G+ M Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370 >gi|86138798|ref|ZP_01057370.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85824445|gb|EAQ44648.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 381 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 28/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ +K ++G Y L+G+K F+S SDA++ + + EG G V Sbjct: 124 LTEPGSGSDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRTGEEGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 +EDG+ GL + L+ K+G +S T +++F + + + E+ K Y Sbjct: 183 --YVEDGT-KGLSFGGLEEKMGWKSQPTAQVQFDDC------KIPANNLVGEEGKGFKYA 233 Query: 318 ---LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD +++S + A+ + Y R G + ++ +AD+ +++ AA Sbjct: 234 MMGLDGGRLNISSCSLGAAQTALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D+ A A + K + + ++ + ++ GG GY+ + Sbjct: 294 RVFLRQAAWKLDQG------ALDASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368 >gi|332027694|gb|EGI67762.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior] Length = 422 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 22/268 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D A+ + +K DG Y ++G K W +S ++ F++ A G + Sbjct: 165 LTEPNSGSDAFALKTVAKK--DGSDYVINGTKMWISNSDIAGVFLVFANANPSAGYRGIT 222 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDM 312 D GL + ++K+G +++ T + F SN G + G + + Sbjct: 223 TFFVDRDTPGLTVGKPEDKLGIKASGTCMVHFDNVRVPESNILGEFGQGYKYAAGFLNEG 282 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 ++ I + ++ ++ + SL I Y R G + M+ IA D+ A L Sbjct: 283 RVGI--GAQMIGIA--QGSLDATIPYTLERKQFGKDVFSFQAMQHQIAQAVTDLECARLL 338 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D K +EAA A+++A T A V + ++ +GG G+ + + Sbjct: 339 VYNAARLVDAKKDVMKEAAMAKLIASET-------ASRVTTKCIDFMGGVGFTTDFPQEK 391 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 +YR++ +I G+ N + + + K Sbjct: 392 YYRDAKIGTIYEGTSNMQLSTIAKCIRK 419 >gi|301061924|ref|ZP_07202654.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300444028|gb|EFK08063.1| acyl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + + + DG Y ++G+K F+++ S ++ A + Sbjct: 123 FALTEPGAGSD--PVSQKTKAVRDGDSYIINGNKMFITTGKNSHVTVVTAYTDPDKRHRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK---- 313 + + + NG + + K+G R++ TVEL F D V P E++ Sbjct: 181 ISAFVVEKGTNGFSVGKEEKKMGLRASDTVELIFE--------DCRV---PAENLLGQEG 229 Query: 314 -----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + LD + +S + +A+A + YA R G + ++ IAD+A Sbjct: 230 DGFVIAMTSLDGGRIGISSQSLGVAQACLDAAVSYANERVQFGRPISQFQGLRWMIADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L+F A D ++ + A+ A++ A +MA +A++ GG G Sbjct: 290 TQIEAARLLTFNAAAMRDRGENYTAAASMAKVFA-------SEMANRTAYQALQIHGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI+E + R+YR++ ++ G+ Sbjct: 343 YIQEYPVERYYRDARVFTLYEGT 365 >gi|124009561|ref|ZP_01694235.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] gi|123984800|gb|EAY24775.1| acyl-CoA dehydrogenase [Microscilla marina ATCC 23134] Length = 389 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + + + D Y L+G K W + ++D ++++AQ G + Sbjct: 135 LSEPEAGSDATSQRTTAEDKGD-YYLLNGTKNWITNGSIADTYLVIAQTYPEKGQKGINV 193 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 L+ + G + ++K+G R + T L F++ FGF ++ G Sbjct: 194 LIVEKGMEGFVVGKKEDKLGIRGSDTHSLMFTDVKVPKENRIGDDGFGFRFAMKTLNGG- 252 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +I I + ++ +SL YA+ R G + + +AD+A +I A Sbjct: 253 ----RIGIAAQALGIASGAYELSL----KYAQERKAFGKPIHQHQAIAFKLADMATNIEA 304 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A + D + YA++ A + K + K+A EA++ GG GY++E Sbjct: 305 ARLLVLKAARAKDMGQD------YAQLSA-MAKLFASKVAMETTVEAVQVHGGYGYVKEY 357 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 358 HVERLMRDAKITQIYEGT 375 >gi|227536445|ref|ZP_03966494.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227243700|gb|EEI93715.1| Glutaryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 386 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A+ ++ K DG Y L+G K W ++P+ D ++ A Sbjct: 120 PKLATGELIGSFGLTEPNHGSDPTAMETRLSKDRDG-YILNGAKMWITNAPVCDLAVVWA 178 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + EG+V +V R ++ G NK R++ T EL F + +L D++ Sbjct: 179 RDEEGKVRGIIVEREMK-----GFTTPETHNKWSLRASKTGELIFEDVRIPQENILPDVS 233 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358 GP L L+SA +S + A A+ Y+ R G + + ++ Sbjct: 234 SMKGP------LSCLNSARYGISWGVIGAAVDCYQTALRYSLERQQFGKPVASYQLQQKK 287 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A+ +I A LS+RL +E K+ ++ + A K MA + E+ + Sbjct: 288 LAEFLTEITKAQLLSWRLGVLKNEGKATPQQISMA-------KRNNVNMALQIARESRQM 340 Query: 419 IGGSGYIEERSIARH 433 +G G + E I RH Sbjct: 341 LGAMGIVGEFPIMRH 355 >gi|126436663|ref|YP_001072354.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126236463|gb|ABN99863.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 47/294 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W P I S E + + + +TE G+D+A I + + D + ++G Sbjct: 109 KRWLPGIISGE-------------LIVAVAMTEPGAGSDLAGIKTSAVRDGDD-WIVNGS 154 Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+SS ++ D +++ + + G L+ + G R +K+G T EL Sbjct: 155 KTFISSGINCDLVVVVCRTDPEAGHKGFTLLVVEDGMEGFTRGRKLDKMGLHYQDTAELF 214 Query: 291 FSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 F + F L+ +L P E + I AI +++G R + + + Sbjct: 215 FEDVRVPAANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETFRQTL 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA+ R G + + + +A++ ++ R + + + + EA+ A Sbjct: 264 QYAKDRKAFGQSIGNFQHNRFLLAEMDTELEIGEQYIDRCLQAVVDGELTAVEASKA--- 320 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+WC + A VI ++ GG GY+ E +AR Y ++ +I G+ M Sbjct: 321 ----KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370 >gi|16126411|ref|NP_420975.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15] gi|13423669|gb|AAK24143.1| isovaleryl-CoA dehydrogenase [Caulobacter crescentus CB15] Length = 378 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 39/290 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ S E+ + L ++E G+D+ ++ + +++ D Y Sbjct: 103 TPEQKARYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMKLRAEQVGD-RY 148 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 L+G K W ++P +D ++ A+ EG G F+V + ++ G + +K+G R Sbjct: 149 ILNGTKFWITNAPHADTLVVYAKTGEGSRGITAFIVEKGMK-----GFSVSKKLDKMGMR 203 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAI 336 + T EL F + + + NV + +L+ + A+++ M+ L + Sbjct: 204 GSDTAELVFEDC---EIPEENVMGPVGGGVGVLMSGLDYERAVLAAGPLGIMQACLDVVL 260 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R R G + +M+ IAD+ + + +A A + +A + D K+ +AA A +M Sbjct: 261 PYVRDRKQFGQPIGSFQLMQGKIADMYVALNSARAYVYAVAKACDAGKTTRFDAAGAILM 320 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 321 A-------SENAVKVSLEAIQALGGAGYTKEWPVERLLRDAKLYDIGAGT 363 >gi|255535084|ref|YP_003095455.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae bacterium 3519-10] gi|255341280|gb|ACU07393.1| Acyl-CoA dehydrogenase, short-chain specific [Flavobacteriaceae bacterium 3519-10] Length = 595 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 90/400 (22%), Positives = 164/400 (41%), Gaps = 81/400 (20%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257 LTE G+D + ++ + DG Y ++G K W ++ +D F A++E + F+ Sbjct: 150 LTEPDAGSDANSGKTKARLSEDGKHYVINGQKMWISNAGFADTFTFFAKIEDDKNITGFV 209 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDL 302 + R LED P + ++K+G RS++T ++ F+ N F L L Sbjct: 210 INRSELED--PAQMTMGEEEHKLGIRSSSTRQVYFNDMKVPVENVLGERNNGFKIALNAL 267 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 NV + A ++ G R LA A YA R G + +++ IA++ Sbjct: 268 NVGR-----------IKLAAANLDGQRRILALATQYANERKQFGVAIATFGAVRKKIAEM 316 Query: 363 ALDIAAATALSFRLANSF--------------DEAKSRSEEAAYARIMAPITKYWCCKMA 408 A I + A S+R A EA+ + E YA + I K + + Sbjct: 317 ATGIFVSEAGSYRAARDIQDKIDELVAGGMNHQEAELKGVE-EYA-VECSILKVFVSDLT 374 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQL 468 E ++ GG G+ E+ + +R+S + I G+ L + +L K T Sbjct: 375 QHTADEGIQIYGGMGFSEDAPMEAAWRDSRISRIYEGTNEINRLLAVGMLIKKTM----- 429 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF--------LTEKIALASSAAALYRA 520 K I +L+ ++++ KE G+ F L+E+ AL ++ ++ Sbjct: 430 ------------KGEIDLLKPAMAVGKELMGIPSFDVPDYSELLSEEKALLTNLKKVFLM 477 Query: 521 GMNDIADVFLENRFLDNCHSTHCMLHGRFNAAHIIDSLYL 560 ++ L+ +D H +L NA+ I++ +Y+ Sbjct: 478 ----VSGAALQKYMMDIEKQQHLLL----NASEILNQIYM 509 >gi|218781189|ref|YP_002432507.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762573|gb|ACL05039.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 41/268 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE-----GRV 253 +G+TE G+D+A++ + +K D Y L+G K F+++ P++D ++ A+ + V Sbjct: 125 MGVTEPDAGSDMASMKTTAEKAGDK-YVLNGSKMFITNGPIADVAVVYAKTDPAAKHAGV 183 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 F+V E G+P LK K+G R++ T EL F+ N G +++ Sbjct: 184 SAFIV----EKGTPGFSAGPPLK-KMGVRTSLTSELIFADCEIPAENLLGKEGDGFKMAS 238 Query: 307 GPVE-DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360 VE D +L+ +V + + + YA+ R I D+P+ +KR +A Sbjct: 239 QTVEWDRSVLL-----APTVGSVAYLINKCSRYAKDR-----IQFDRPIAEYQAIKRKLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ + AA +L +R+A + D+ + + YA + W MAP + +A+ G Sbjct: 289 ELKIFEEAARSLVYRIAWAKDQGQPLNH--LYASVAKLFIGDWS--MAP--MNDAVTLHG 342 Query: 421 GSGYIEERSIARHYRESPANSILLGSGN 448 G GY +E + R +R+ +I G+ + Sbjct: 343 GYGYCQEYDVERVFRDGRLAAIGGGTSD 370 >gi|197122616|ref|YP_002134567.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196172465|gb|ACG73438.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259 LTE G+D +A+ + + D + LSG K F++ + +F++LA+ + GR + Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDA-WALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316 +LE G +G + + K+G RS+ T +L E LG+ V G ++ ++IL Sbjct: 184 FILEPGM-SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGE--VDHGFIDTLQILD 240 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++V R +L EA YA+ R G + + + +AD+A ++ AA L Sbjct: 241 RGRITIGALAVGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D + A+ A K + + A + A++ GG GY + + RH+ Sbjct: 301 RAAALCDAGEPFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353 Query: 435 RESPANSILLGSGNAMV 451 R++ I G G + V Sbjct: 354 RDAKLTEI--GEGTSEV 368 >gi|167722582|ref|ZP_02405818.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98] Length = 669 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 16/270 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q++ G + +SG K W SS + + A+ G +V Sbjct: 135 LTEPDAGSNARAIASVAQRVDGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 192 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 193 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 251 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 252 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 311 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 364 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465 + I G ++ + + LL G +L Sbjct: 365 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 394 >gi|302522087|ref|ZP_07274429.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB78] gi|302430982|gb|EFL02798.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB78] Length = 606 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/324 (22%), Positives = 127/324 (39%), Gaps = 51/324 (15%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 SRE T PM + + L+E + G+ +A + ++ + DG L G+K ++S Sbjct: 150 SREQIDTFVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAEHAGDGTCRLFGNKMWISGGD 209 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRS 283 + ++LA+ G + F+VP+ L DG + N + L +K+G R Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDGDGGIGARNDVVLAGLNHKMGYRG 269 Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329 L F G+L+G+ N + M +I + L + + +G Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGYLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328 Query: 330 VSLAEAIHYARRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLAN 378 A+ YAR R + P ++R + + A AL+ Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATPQVPIIEHTDVRRMLLAQKAYVEGALALTLYCGR 385 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D+ ++ E AA I+ PI K W + + A++ GG GY E + + Sbjct: 386 LVDDQRTAPEPAAREEAGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 YR++ N I G+ LD+L Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469 >gi|220917399|ref|YP_002492703.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955253|gb|ACL65637.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259 LTE G+D +A+ + + D + LSG K F++ + +F++LA+ + GR + Sbjct: 125 LTEPGSGSDASAMRTTAVRRGDA-WALSGSKTFITQGTVGGSFVVLARTDPGRRHHGITA 183 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILI 316 +LE G +G + + K+G RS+ T +L E LG+ V G ++ ++IL Sbjct: 184 FILEPGM-SGFTQRPIHGKLGMRSSDTAQLFLDEVEVPDAQRLGE--VDHGFIDTLQILD 240 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++V R +L EA YA+ R G + + + +AD+A ++ AA L Sbjct: 241 RGRITIGALAVGLGRGALEEARAYAKERQAFGKPIAEFQAIGFMLADMATELDAARLLVR 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D + A+ A K + + A + A++ GG GY + + RH+ Sbjct: 301 RAAALCDAGEPFGTAASMA-------KLYASEAAMRATSRAIQIHGGYGYTRDFPVERHF 353 Query: 435 RESPANSILLGSGNAMV 451 R++ I G G + V Sbjct: 354 RDAKLTEI--GEGTSEV 368 >gi|118465055|ref|YP_881103.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118166342|gb|ABK67239.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 44/273 (16%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCF 256 + + +TE G+D+A I + + D + ++G K F+SS ++ D +++ + + G Sbjct: 122 VAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKTFISSGINCDLVVVVCRTDPDAGHK 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDL 302 + + +G R +K+G T EL F N F L+ +L Sbjct: 181 GFTLFVVEAGMDGFTRGRKLDKMGLHYQDTAELNFDNVRVPSANLLGKEGRGFYHLMHNL 240 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKR 357 P E + I AI +++G R + + + YA+ R G QP+ + Sbjct: 241 -----PSERLSI------AISAIAGARETWRQTLQYAKDRKAFG-----QPIGSFQHNRF 284 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A++ ++ R + + + + EAA A K+WC + A VI ++ Sbjct: 285 MLAEMDTELEIGEQYIDRCLQAVVDGELTAVEAAKA-------KWWCTETAKKVIDGCVQ 337 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E +AR Y ++ +I G+ M Sbjct: 338 LHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370 >gi|56709185|ref|YP_165230.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56680870|gb|AAV97535.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 380 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 44/300 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 ++L TP +W P + ++ AI LTE + G+D+A T Sbjct: 98 ISLFGTPEQQAEWLP--------------LTRSGQAIAAFALTEPQSGSDVANSTMTATA 143 Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNK 278 D Y L+G K W + ++D + ++A+ G L +L G P +RL+ Sbjct: 144 DGDD-YVLNGEKTWISNGGIADVYTLIARTGEAPGARGLSAFVLPAGLPGFEVVERLEVM 202 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI-LIYLDS-----AIMSVSGMR 329 + L F++ LLG P E K+ + LD A ++ R Sbjct: 203 A---PHPLARLRFTDVRVPKSALLG------APGEGFKVAMAVLDVFRSTVAAAALGFAR 253 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SE 388 +L E++ R V G L D +++ IAD+ALD+ A+ L++R A + D R S Sbjct: 254 RALDESLARVTTRQVQGAPLFDLQMVQGHIADMALDVDASALLTYRAAWAKDMGAPRVSR 313 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 EAA A K + A VI +A++ GG G + YR+ A I G+ + Sbjct: 314 EAAMA-------KLYSTDHAQQVIDKAVQLFGGDGVRRGEKVEELYRDIRALRIYEGASD 366 >gi|86135150|ref|ZP_01053732.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152] gi|85822013|gb|EAQ43160.1| acyl-CoA dehydrogenase [Polaribacter sp. MED152] Length = 392 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + + D Y L+G K W ++P D ++ A+ EGR+ + Sbjct: 136 FGLTEPNHGSNPGGMETNFKDKGDH-YLLNGAKMWISNAPFCDVAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 V R +E G NK R++AT EL F N LL + + P Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNVQVPKENLLPNKSGLGAP------ 243 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDSA +S + A A+ YA+ R G + + ++ +A++ +I A Sbjct: 244 LGCLDSARYGISWGAIGAAMDCYDTALRYAKEREQFGKPIGQFQLQQKKLAEMITEITKA 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++RL +E K+ S + + A K +MA V EA + +GG G + S Sbjct: 304 QLLAWRLGTLKNEGKATSAQISMA-------KRNNVEMALKVAREARQMLGGMGISGDYS 356 Query: 430 IARH 433 I RH Sbjct: 357 IMRH 360 >gi|229490551|ref|ZP_04384389.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229322371|gb|EEN88154.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 382 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T+ ++ D Y ++G K F++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLTTTAKRDGD-HYVVNGAKTFITSGVRADFVVAAVRTGGPGAGGVS 182 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G+P G R K+G R++ T EL F + L+G N + + Sbjct: 183 LLVIEKGTP-GFTVSRKLEKMGWRASDTAELSFVDARVPVENLVGAENSGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + + L + + R R G LI + ++ + ++A I A + Sbjct: 242 ERVALAAQAYASAERCLELTLEWCRARETFGRPLISRQAVQNTVTEMARKIDVAKVYTHS 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + E +A+ A T W V +A++ GG GY++E + R Y Sbjct: 302 VIERYMAGDGDLIAEVCFAKNTAVETGEW-------VANQAVQLFGGLGYMQESEVERQY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|167748220|ref|ZP_02420347.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662] gi|317472255|ref|ZP_07931583.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167652212|gb|EDR96341.1| hypothetical protein ANACAC_02964 [Anaerostipes caccae DSM 14662] gi|316900212|gb|EFV22198.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 36/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D A + + DG Y L+G K F+++ P++D F++ A + + Sbjct: 125 LTEPEAGSDAAGCKTTA--LWDGEAYVLNGLKCFITNGPLADYFLVFALTDPEKKTKGLS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK------ 313 + + + G+ ++NK G RS E+ F N P E+M Sbjct: 183 AFVVEKAMPGVSVGTIENKCGIRSAQVSEIIFENV-----------RVPKENMVGEEGKG 231 Query: 314 ---ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + LD + V+ + +A+ A+ Y + R G L + +A++++ Sbjct: 232 FAVAMKDLDGGRIGVAAQGLGIAKGAYDIALQYLKDRQQFGKPLCKNQYLAFKMAELSVQ 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + ++ A E +S S AA A+++ C A V EA++ +GG+GY+ Sbjct: 292 IEQAQYMLYKAAMDKQEGRSYSISAAKAKMV-------CTDAAMQVSQEAVQMLGGNGYM 344 Query: 426 EERSIARHYRESPANSILLGS 446 +E + R R++ I G+ Sbjct: 345 KEYHVERMMRDAKITQIYEGT 365 >gi|327441462|dbj|BAK17827.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 378 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 23/280 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + K D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAEGKKIGAYGLTEPGSGSDAGGMKTYAVKDGDD-YILNGSKIFITNGGVADIYVVFAV 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + ++E P G + + K+G RS+ T E+ F N +LG+ Sbjct: 172 TDPEAKNGTTAFIVEADYP-GFSVGKKEKKLGIRSSPTTEIIFDNCRVPKENVLGE--EG 228 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 G + MK L D ++ V +A+ A+ YA+ R G + + +A Sbjct: 229 QGFIIAMKTL---DGGRNGIAAQAVGIAQGALDAAVDYAKERVQFGKPITANQGISFKLA 285 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A +I A+ L+++ A + +A A+++A T A V EA++ G Sbjct: 286 DMATEIEASRLLTYQAAWLESNDLPYGKASAMAKLLAGDT-------AMKVTTEAVQVFG 338 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G GY ++ + R+ R++ I G+ L + ++ K Sbjct: 339 GYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMITK 378 >gi|311103482|ref|YP_003976335.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310758171|gb|ADP13620.1| acyl-CoA dehydrogenase, N-terminal domain protein 1 [Achromobacter xylosoxidans A8] Length = 388 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 31/278 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ ++ + + ++E G+++A I + + D Y L+G K W + +D I+LA+ Sbjct: 112 PVLASAKNVCVAISEPNHGSNVAGIELKAEDQGDH-YVLNGSKLWITNGVNADYAIVLAR 170 Query: 249 V-----EGRVGCFLVPRLLEDGSPNGLCYQ-RLKNKIGNRSNATVELEFSNTFGFLLGDL 302 +G++ FLV R + SP Y+ RL +K+ +++ T EL F G + Sbjct: 171 TFSASCDGKLSLFLVER---EQSP----YEARLVDKMVLKASGTAELRFD---GVRVPKE 220 Query: 303 NVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 N+ +K ++ L+ A+ +V + +L +I YA+ R G + + +++ Sbjct: 221 NLLGAEGTALKTMLTGLNYGRLNIAMGAVGAAQAALDLSIEYAKTRRQFGRPIGEFQLVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + I D+ + AA AL ++ A + ++ AR+ I K + + A V A+ Sbjct: 281 KHIVDMMVRTEAARALGYKAAVAV-------QKGLPARVECSIAKLYGAEAAHEVAKIAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GG GY E + R +R++ +I G+ L V Sbjct: 334 SVHGGLGYSTEYPLERIFRDTSGGTIPEGTAEVQTLIV 371 >gi|170582748|ref|XP_001896268.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Brugia malayi] gi|158596553|gb|EDP34881.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Brugia malayi] Length = 611 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 31/270 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250 LTE G+D ++ + +K SDG Y L+G K W + +D F + A+ + Sbjct: 190 LTESGTGSDANSVQTHAEKSSDGRCYVLNGGKLWISNGSFADIFTVFARTQVKDKDGTSK 249 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 ++ F+V R S G+ + K+G + + TVE+ F NT LLG G Sbjct: 250 SKMSAFIVER-----SHGGITTSIPEKKMGIKGSKTVEVHFDNTKVPVDNLLG--AEGEG 302 Query: 308 PVEDMKILIYLDSAIMSV--SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M IL I +V M+ + + I + R G L + ++ + D+ L Sbjct: 303 FKLAMNILNNGRFGIPAVCTGSMKFCIQKTIEHISERGQFGRKLKEFGNVQEQLTDMVLR 362 Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A +L + L+ D+ E EAA A+IMA + C A++ GG GY Sbjct: 363 HYATESLLYMLSGLMDKGTVDYELEAALAKIMASENAWIVCD-------RAIQLHGGMGY 415 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454 ++E + R R+ I G+ + + L V Sbjct: 416 MKECGLERVMRDLRIFRIFEGANDVLRLFV 445 >gi|150007117|ref|YP_001301860.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503] gi|255015268|ref|ZP_05287394.1| acyl-CoA dehydrogenase [Bacteroides sp. 2_1_7] gi|256840494|ref|ZP_05546002.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13] gi|298377542|ref|ZP_06987494.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19] gi|149935541|gb|ABR42238.1| acyl-CoA dehydrogenase [Parabacteroides distasonis ATCC 8503] gi|256737766|gb|EEU51092.1| acyl-CoA dehydrogenase [Parabacteroides sp. D13] gi|298265561|gb|EFI07222.1| acyl-CoA dehydrogenase family protein [Bacteroides sp. 3_1_19] Length = 568 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 133/291 (45%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ ++ + +DG + L+G K F+++ +D ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQSVMLKASYNEADGCWYLNGVKRFITNGDADIHLVLARSEEGTKDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ +R++NK+G + + T EL F N L GD + G ++ ++ Sbjct: 231 RGLSMFIYDKRNGGVNVRRIENKMGIKGSPTCELVFKNAKAELCGDRKL--GLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPV------MKRAIADIAL 364 ++ A + + V L+EA + R G +I+ P + RA AD + Sbjct: 287 ALMNGARLGIMAQAVGLSEAAYREAYAYALDRKQFGKSIIEFPAIAEIIALMRAKADASR 346 Query: 365 DIAAATALSFRLANSFDE--------AKSRSEEAAYARI---MAPITKYWCCKMAPAVIA 413 + TA + + D+ + R E Y+++ P+ K + A Sbjct: 347 SMLYETARFVDVYKALDDISKERKLTPEERQEFKKYSKLADAFTPMGKGMTTEYANQNAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +A++ GGSG++++ + R YR++ +I G+ V+ + + GT L Sbjct: 407 DAIQVHGGSGFMKDYACERIYRDARITNIYEGTTQLQVVAAIRHVTTGTYL 457 >gi|15613693|ref|NP_241996.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125] gi|10173746|dbj|BAB04849.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125] Length = 381 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 37/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------- 252 GLTE G+D ++ D Y ++G K ++++ +++ V G+ Sbjct: 123 FGLTEPNAGSDAGGTRTKAVLEGD-EYVINGEKCWITNAGYARTVIVTAVTGKDERGKPV 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 + +VP +E G +K+G R++ T EL + LLGD P Sbjct: 182 ISALIVPTGIE-----GFTISCNYDKMGVRASNTCELVLEDVRVPKENLLGD------PT 230 Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + K +Y LD +S+ + V +A+A + YA R G + ++ +AD+A Sbjct: 231 KGFKQFLYTLDGGRISIGALAVGIAQAAFDRALAYANERKQFGQKISSFQAIQFKLADMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++I A + + A D+ K ++E AYA++ A T A +A++ GG G Sbjct: 291 MEIELARNMVLKAAWLKDQKKPFTKEGAYAKLYASET-------AMRTANQAIQIHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451 Y++E + R R+ A + +G G + + Sbjct: 344 YMQEYEVERMLRD--AKLLEIGEGTSEI 369 >gi|146307714|ref|YP_001188179.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145575915|gb|ABP85447.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 386 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 20/267 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ +K+G RS+ T ++ F N + +G + G M++L Sbjct: 182 SLIMVPMKTPGISVSPHLDKLGMRSSETAQVFFDNVRVPQRYRIG----AEGAGFMMQML 237 Query: 316 IYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + + + G+ + I Y ++RH G LID V+ +A++ +I A Sbjct: 238 QFQEERLFGAANMIKGLEHCVDATIDYCKQRHTFGQPLIDNQVIHFRMAELQTEIECLRA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ + + + ++ A+ A++ A ++ V ++ GG G++ + ++ Sbjct: 298 LVYQATEQYVKGRDVTKLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVS 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458 R YR+ SI G+ M+ + L+ Sbjct: 351 RAYRDVRLVSIGGGADEIMLGIICKLM 377 >gi|171185009|ref|YP_001793928.1| acyl-CoA dehydrogenase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934221|gb|ACB39482.1| acyl-CoA dehydrogenase domain protein [Thermoproteus neutrophilus V24Sta] Length = 405 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 38/282 (13%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGCF 256 TE G+D+A + ++ +++ G + ++G K F+SS ++ ++LA+ GR Sbjct: 135 TEPCCGSDVAGVRTRARRVG-GRWVINGRKAFISSSDVAHYILVLARTSDPPDAGRRHVG 193 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMK 313 L ++E +P G+ ++ +K+G R N E+ L D+ V + E M Sbjct: 194 LSMFVVERDAP-GVKVEQCYSKLGLRGNHACEIS--------LTDVEVPEESLVGREGMG 244 Query: 314 ILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +++ A +V + + +A YA RR G + ++ ++ ++ Sbjct: 245 FYYAMEAFNRSRIGIAAQAVGMAQAAFEKAFDYAHRREAFGVKIASFQAIQFSLVEMLAK 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A L++ A DE + E + +A + KY+ + A VI++A++ GG+G + Sbjct: 305 IMTARLLTYMAAKLADEGR---REFVF---VASLAKYYATEAAEEVISDAVDVFGGAGVV 358 Query: 426 EERSIARHYRESPANSILLGSGNAMVL----DVLNLL-EKGT 462 E + R YR+ I G+ N L ++ LL E+GT Sbjct: 359 RETGLERLYRDVKITQIYEGANNVQKLAAYRQLVRLLQERGT 400 >gi|312112657|ref|YP_003990973.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311217758|gb|ADP76362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 379 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 54/299 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223 T K + PK+ S EY LG LTE G+D ++ ++ + D Sbjct: 102 TEEQKKKYVPKLASGEY----------------LGAFCLTEPGAGSDAKSLKTKAVRQGD 145 Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLK 276 Y L+G K F+++ +D +I+ A+ + + F+V E G+P G + + Sbjct: 146 -YYILNGSKIFITNGGEADTYIVFARTDPNEKGSRGISAFIV----EKGTP-GFIIGKDE 199 Query: 277 NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSL 332 K+G + TV++ F N LLG+ + KI + LDS + ++ + + Sbjct: 200 KKMGLHGSRTVQIMFENAKVPAENLLGEEG------QGFKIAMANLDSGRIGIAAQSLGI 253 Query: 333 AEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 AEA YA+ R G + +Q + +AD+A + AA L + A + Sbjct: 254 AEAALEHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCG 313 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +EAA A++ A T M A+ EA++ GG+GY ++ + R +R++ I G+ Sbjct: 314 KEAAMAKLFASRT-----AMENAI--EAVQIFGGNGYTKDYPVERLFRDAKICEIYEGT 365 >gi|144899157|emb|CAM76021.1| isovaleryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1] Length = 387 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 32/279 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKKGD-RYILNGTKMWITNGPDADTLVVYAKTDVNAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G + +K+G R + T EL F N G NV G Sbjct: 187 TTFIIEKDFKGFSVAQKLDKLGMRGSNTGELVFQDCEVPEENVLG------NVGKGVNVL 240 Query: 312 MKILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M L Y + A+++ + MR + + Y R G + +M+ IAD+ + A Sbjct: 241 MSGLDY-ERAVLAGGPLGIMRACMDVVVPYIHERTQFGQAIGTFQLMQGKIADMYTTMNA 299 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A ++ +A + ++ ++AA + W + EA++ +GG+GYI E Sbjct: 300 CRAYAYAVAKACTRGETTRKDAAGVILYTAEKATW-------MALEAIQTLGGNGYINEY 352 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 S R R++ I G+G + + +L G LFE+ Sbjct: 353 STGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 385 >gi|254784718|ref|YP_003072146.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae T7901] gi|237684433|gb|ACR11697.1| acyl-CoA dehydrogenase family protein [Teredinibacter turnerae T7901] Length = 591 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 115/291 (39%), Gaps = 34/291 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML-------AQV 249 + LTE GTD+ I ++ + ++D Y ++G K F++ +++ I L A Sbjct: 163 MDLTEPHAGTDLGLIRTRAEPLADDSYAVTGTKIFITWGEHQLAENIIHLVLAKLPDAPA 222 Query: 250 EGR-VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 R + FLVP+ + D G N L+ K+G +++ T + F G+L+G+ + Sbjct: 223 GSRGISMFLVPKYIPDAQGEPGERNRFSCGGLEKKMGIKASPTCVMNFDGARGWLVGEPH 282 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR------------HVSGGILID 351 + M L I V S A+ YAR R L+ Sbjct: 283 KGLQAMFTMMNYERLVVGIQGVGAAEASYQNAVSYARERLQGRSPVGAHSPEKEADNLLV 342 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCC 405 P ++R + + A A ++ D AK +++ A ++ P+ K + Sbjct: 343 HPDVRRMLLTMRALNEAGRAFYIYVSQWLDIAKFSDDQQRKTQAEALVALLTPVAKGFMT 402 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A V + GG G+I E + R++ I G+ +D++ Sbjct: 403 DRAFEVAVLGQQVYGGHGFIREWGQEQLVRDTRITQIYEGTNGVQAMDLVG 453 >gi|228909054|ref|ZP_04072883.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] gi|228850562|gb|EEM95387.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 200] Length = 397 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G V C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ I D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|126458792|ref|YP_001055070.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248513|gb|ABO07604.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 376 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 60/334 (17%) Query: 153 SPSVTS-----ASMVA----LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 SP V + +SM+A M PR ++ PK S E + L+ Sbjct: 76 SPGVATIMEIQSSMIAENIYAMGNPRQREELLPKFASGE-------------LICAFALS 122 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR---VGCF 256 E G+D AI ++ ++ G + +SG K W S +D +++ A+ E R + F Sbjct: 123 EPCCGSDAGAIETRAVRVG-GEWRISGVKMWITSGLYADYYLVFARTGPKEARHKAITAF 181 Query: 257 LVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGPVEDM 312 LV R G C + ++ G R T E++F+ ++G +N E Sbjct: 182 LVKR--------GSCVEATPIEVMGVRGTGTAEVKFNECPANDDDIVGKIN------EGW 227 Query: 313 KILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++++ L+ ++SG+ V +A EA+ +AR R + G LI+ + +A++ I Sbjct: 228 AVVVHALNVGRAAISGVAVGIARGAFEEALSWARGRRLFGKTLIEFQNTQFELAEMYAAI 287 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A L++ A +D KS A MA + K ++A V A++ GG GY + Sbjct: 288 ETARTLTYYAAYLYD-VKSPDFVA-----MAHVAKLQTARIAVDVARRAVQLEGGYGYSK 341 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E YR++ I G+ M + LLEK Sbjct: 342 ESKAEMFYRDAKILEIGEGTNEVMKYVLFKLLEK 375 >gi|264677855|ref|YP_003277761.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262208367|gb|ACY32465.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 392 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 31/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 +G++E G+D++ I S +K D Y +SG K W +S +D ML V Sbjct: 123 IGVSEPGAGSDVSGIKSHARKDGDD-YIISGQKMWITNSIQADWMCMLVNTGDGPVHKNK 181 Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 +VP L +G L Q+L+ KIG S+ T L F +L+G Sbjct: 182 SLIMVP--LREGPRGKLTRGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236 Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G + M+ + S SG M + + I +A++R + G LIDQ ++ +A++ Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A AL++R A + + + A+ A++ + ++ V ++ GG Sbjct: 296 QTEVEALRALTYRAAQMYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 G+ + ++R YR+ SI G+ M+ Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377 >gi|168052474|ref|XP_001778675.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669993|gb|EDQ56570.1| predicted protein [Physcomitrella patens subsp. patens] Length = 388 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 13/252 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K+ G Y L+G+K W + P ++ I+ + + G + Sbjct: 129 LAMSEPNSGSDVVSMKCRAGKVEGG-YVLNGNKMWCTNGPKANTLIVYVKTDVHAGAHGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G + +K+G R + T EL F N F L V M + L Sbjct: 188 TAFIIEKGMEGFSTAQKLDKLGMRGSDTCELVFENCFVSNDQILGQEGKGVYVMMSGLDL 247 Query: 319 DSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT-ALSF 374 + +++ M+ L + Y R R G + + +M+ +AD+ + A++ A + Sbjct: 248 ERLVLAAGPLGLMQACLDVVLPYVRERQQFGKPIGEFQLMQGKLADMYTKMQASSRAFVY 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A D + ++ A + + + A + +A++C+GG+GY+ E R Sbjct: 308 SVARMCDAGHADRKDCASVILFSA-------ENATQMALQAIQCLGGNGYVNEYPTGRLL 360 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 361 RDAKLYEIGAGT 372 >gi|209963739|ref|YP_002296654.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW] gi|209957205|gb|ACI97841.1| isovaleryl-CoA dehydrogenase [Rhodospirillum centenum SW] Length = 390 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/297 (21%), Positives = 133/297 (44%), Gaps = 37/297 (12%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + + PK+ S E+ +G L ++E G+D+ ++ + Sbjct: 104 NQIRLNGSPEQKRRYLPKLISGEH--------------VGALAMSETGAGSDVVSMKLRA 149 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLK 276 ++ D + L+G K W + P +D ++ A+ + G + L+E G C Q+L Sbjct: 150 ERRGD-RFVLNGSKMWITNGPDADVLVVYAKTDPTAGPKGITAFLIEKGFKGFSCAQKL- 207 Query: 277 NKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 +K+G R + T EL F N G + G + V ++ + L+ + + M+ Sbjct: 208 DKLGMRGSHTGELVFQDCEVPEENVLGRMNGGVRVLMSGLDYERALL----SAGPIGIMQ 263 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 +L + Y +R G + + ++ +AD+ + + + A ++ + + D + ++ Sbjct: 264 AALDVVVPYVHQREQFGQPIGEFQFIQGKLADMYVALNSTRAYAYAVGKAADLGRITRKD 323 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 AA +MA + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 324 AAGVILMA-------AENATKVALDAIQVLGGNGYINEFPTGRLLRDAKLYEIGAGT 373 >gi|167568133|ref|ZP_02361049.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147] gi|167568238|ref|ZP_02361112.1| putative acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786] Length = 378 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 29/290 (10%) Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 AP I D + + K + A +G +TE G+D+ + + + D Y L+G Sbjct: 96 APYILHYGSDALKEHYLPKLASAEMIGAIAMTEPGAGSDLQGVRTAAVRDGDH-YVLNGS 154 Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ +D I++A+ G + D G + K+G ++ T EL Sbjct: 155 KIFITNGWHADVVIVVARTTPEGGSKGTSLFVVDTEMAGFSKGKRLKKVGMKAQDTSELF 214 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345 F G LLG+ N G V M+ L + L AI +++ +L+ + Y R R Sbjct: 215 FDGVRVPAGNLLGEEN--RGFVYLMQELPWERLQIAISAIASAEAALSWTLDYTRDRRAF 272 Query: 346 GGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIMAPIT 400 G +ID + A+A++ +I + +LA D A A + Sbjct: 273 GKAVIDFQTSRHALAELKSEIQVGRVFVDKCIELQLAGKLDAA------------TASMA 320 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 KYW ++ VI ++ GG GY+ E IAR + +S I G+ M Sbjct: 321 KYWTTELQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIM 370 >gi|116695137|ref|YP_840713.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113529636|emb|CAJ95983.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 377 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE---GRVG--C 255 LTE + G++ + ++ + +D + L+G K F+++ + ++ A E G+ G Sbjct: 125 LTEPQAGSEAHNLRTRA-RFTDNGWVLNGSKQFVTNGQRAGVAVVFASTEPERGKKGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 FLVP +P G + K+G R++ T + + LLG+ L ++ Sbjct: 184 FLVP----TNTP-GFIVHAPEKKLGIRASDTCAITLEDCTVPHDALLGEPGEGLRIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + A YA R G L + P + +AD+A ++ A Sbjct: 239 LEGGRIGI----AAQAIGIARSAFEAACRYASERIQFGRALREHPPIANMLADMATELNA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L R A E EA+ A++ A ++A V ++A++ GG GY+E+ Sbjct: 295 ARLLVHRAARMRSEGVPCLSEASQAKLYAS-------ELAERVCSKALQIHGGYGYLEDY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 PVERHYRDARITQIYEGT 365 >gi|78061564|ref|YP_371472.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77969449|gb|ABB10828.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 377 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A+ I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|108804542|ref|YP_644479.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108765785|gb|ABG04667.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941] Length = 388 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 47/270 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD---AFIMLAQV----EGR 252 GLTE+ GTD AA T ++ DG + ++G K ++++ +D ++A+ +GR Sbjct: 124 FGLTEEEAGTD-AAGTRTTARLEDGRWVINGSKKWITNSGTDITAGVTIIARTGEREDGR 182 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + +VP+ G G Y+ K G R++ L F D V P E Sbjct: 183 PELTAIIVPQDT-PGYTRGPGYE----KTGWRASDQRPLYFE--------DCRV---PAE 226 Query: 311 DM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMK 356 + + L LD ++V + V LA EA+ A+ R G + + ++ Sbjct: 227 NTLGERGRGFRQFLATLDGGRVAVGALSVGLAQACLDEALRRAKERRQFGRAIGEFQAIQ 286 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A++I A + + A D + S EA+ A++ A T A +A+ Sbjct: 287 FKLADMAMEIELARNMVLKAAWLKDMGRPFSREASMAKVFASET-------AKRAADQAV 339 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG G++E ++AR++R+ N I G+ Sbjct: 340 QIWGGEGFMETNAVARYWRQVKINEIGEGT 369 >gi|229192913|ref|ZP_04319870.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] gi|228590523|gb|EEK48385.1| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 10876] Length = 395 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 28/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G V C L Sbjct: 122 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---------P 308 VP+ G+ +++ +G ++ E+EF+N G L ++ G Sbjct: 181 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNV-GIPLENIIGRPGFAFTYLAPYA 234 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ +R L ++ R G LID ++ + D+ +D+ A Sbjct: 235 LEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEA 290 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + LS + +E ++ + E +IM I KY+ + A++ +G G + Sbjct: 291 SILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCNDNY 344 Query: 429 SIARHYRESPANSILLGS 446 SI+R +R+S I+ GS Sbjct: 345 SISRCFRDSKTMEIVEGS 362 >gi|138895165|ref|YP_001125618.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|134266678|gb|ABO66873.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] Length = 419 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 55/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250 +TE G+D I K D + L+G K F++ F+M+ + Sbjct: 153 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQATN 211 Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 GR G CF+V R + +P L ++ ++ N EL + G+ Sbjct: 212 GREGVTCFIVDRDMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHY----GYK 264 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 LG L ++ A V V AE AI YA+ R G + ++ Sbjct: 265 LG--------------LEWIGYARWVVGARAVGTAERLLQMAIDYAKERVTFGKPIAERQ 310 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ IAD A++I AA L A + DE + R +A + K + M V+ Sbjct: 311 AIQWMIADSAVEIEAAKWLVLNAAFTLDEGEDN-------RHLASMAKLFGANMGNRVVD 363 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY +E I R YRE+ I G+ L + L KG Sbjct: 364 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 411 >gi|313226306|emb|CBY21450.1| unnamed protein product [Oikopleura dioica] Length = 413 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 31/271 (11%) Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE------G 251 L +TE G+D+ ++ T+ Q Y L+G+K W + P+ D I A+ + Sbjct: 148 LSMTEPTAGSDVMSMKTTAVQPAGKDYYVLNGNKYWITNGPVCDTLICYAKTDPTSNAGD 207 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTG 307 + F+V D G + K+G R + T +L F N LLG+ + Sbjct: 208 SITAFIV-----DTDAEGFTANHIPEKMGMRGSPTGDLHFDNVKVPKENILLGEGAGAFV 262 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + I L +A M V M+ + ++ YA R G + +M+ +A++ ++ Sbjct: 263 LMRGLNIERLLGAA-MPVGIMQAVVDQSFPYAHERKQFGRPIGKFQLMQGKMAEMYSSLS 321 Query: 368 AATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A A ++ + S D EA S E A+ ++ C K+A E ++ +GG+GY Sbjct: 322 ACRAYTYSMLKSADQDPEAMSNHECASLIMFVSDA----CTKVA----LEGIQILGGNGY 373 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455 + + + R+ R+ A + +G+G V V+ Sbjct: 374 VNDYPVNRYMRD--AKLMEIGAGTTEVRKVI 402 >gi|77735711|ref|NP_001029554.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] gi|122142996|sp|Q3SZI8|IVD_BOVIN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; Flags: Precursor gi|74268107|gb|AAI02837.1| Isovaleryl Coenzyme A dehydrogenase [Bos taurus] gi|296483314|gb|DAA25429.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] Length = 426 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 49/296 (16%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G Sbjct: 150 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YVLNG 194 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282 +K W + P +D ++ A+ + VP ++E G P G + +K+G R Sbjct: 195 NKFWITNGPDADVLVVYAKTD----VTAVPASRGITAFIVEKGMP-GFSTSKKLDKLGMR 249 Query: 283 SNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 + T EL F +N G L + V + D++ L+ L + + M+ L Sbjct: 250 GSNTCELVFEDCEVPAANILGHLGKGVYVLMSGL-DLERLV-LAGGPLGI--MQAVLDHT 305 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 I Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 306 IPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTTKDCAGVIL 365 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C+GG+GYI + + R R++ I G+G + V Sbjct: 366 -------YSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412 >gi|330823115|ref|YP_004386418.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329308487|gb|AEB82902.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 416 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 31/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250 L+E G+D+A+I+ + + + D + L+G+K W + +D + A+ E Sbjct: 131 LSEPDTGSDLASISCRAELVGDE-WVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWE 189 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + CFL+ + + P G+ Q + KIG T EL ++ + N+ P + Sbjct: 190 G-ISCFLIEKKRGE-FPPGMVGQPIP-KIGYFGWKTFELALND---LRVPRENLIGAPGQ 243 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I+ L++A + + LA+ AI YAR R G + + ++ IA +A Sbjct: 244 AFLIMAKGLETARAHTAARAIGLAQGALEDAIAYARERKQFGMPIAEYQAIRFKIATMAT 303 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA L + ++ D + EA+ ++ A +MA V +EA++ GG+GY Sbjct: 304 EVEAARQLLHYVCSAIDSGRRCDTEASMVKLFA-------TEMAERVTSEALQIFGGAGY 356 Query: 425 IEERSIARHYRESPANSILLGS 446 + ++ RH+R++ I G+ Sbjct: 357 TKLFAVERHWRDARLTKIFEGT 378 >gi|239504114|ref|ZP_04663424.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB900] Length = 387 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 32/267 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N K Sbjct: 185 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAG------FK 237 Query: 314 ILIY---LDSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +++ ++ + V +LA EA+ +A++R G LID V++ + D+A + Sbjct: 238 VIMNNFNMERFFLGVVAYGYALACYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLT 297 Query: 368 AATALSFRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AL A + K + E + + +A T +C A++ +GG G Sbjct: 298 STRALLEETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMG 350 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ R YRE N I G+ M Sbjct: 351 FMRGTKSERIYREVKVNMIGGGAEEIM 377 >gi|295837705|ref|ZP_06824638.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|197695923|gb|EDY42856.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 608 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + +DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKFEFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316 Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378 A+ YA+ R V G L + P ++R++ AL A + Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375 Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 S ++ E+AA ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435 Query: 435 RESPANSILLGS 446 R++ +++ G+ Sbjct: 436 RDAKIDTLYEGT 447 >gi|126737840|ref|ZP_01753570.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] gi|126721233|gb|EBA17937.1| glutaryl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] Length = 406 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A++ ++ +K ++G Y L+G K W ++P++D F++ A+ + G++ Sbjct: 148 FGLTEPDAGSDPASMKTRAEKTANG-YKLTGSKMWISNAPIADVFVVWAKSDEHGGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++KNK R++ T E+ LL + GP Sbjct: 207 FVLEKGMQ-----GLSAPKIKNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257 Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AEA H AR+ R G L + + + +A++ +I Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHSARQYGLDRQQFGRPLANTQLFQLKLANMQTEIT 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DEA + E M I K C A + A + GG+G E Sbjct: 316 LGLQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARNARDMHGGNGISLE 368 Query: 428 RSIARH 433 ++ RH Sbjct: 369 FNVIRH 374 >gi|83717455|ref|YP_440124.1| AMP-binding domain-containing protein [Burkholderia thailandensis E264] gi|83651280|gb|ABC35344.1| AMP-binding domain protein [Burkholderia thailandensis E264] Length = 1323 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AITS Q++ + +SG K W SS + + A+ G +V Sbjct: 791 LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 848 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R T+ L+ + + LG + Sbjct: 849 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 907 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ I D+ I +AL +L Sbjct: 908 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 966 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD ++ E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 967 AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 1020 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 1021 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1053 >gi|120555660|ref|YP_960011.1| acyl-CoA dehydrogenase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325509|gb|ABM19824.1| acyl-CoA dehydrogenase domain protein [Marinobacter aquaeolei VT8] Length = 596 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/314 (21%), Positives = 124/314 (39%), Gaps = 38/314 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV----E 250 + LTE GTD+ I ++ + DG + ++G K F++ D ++LA++ + Sbjct: 164 MDLTEPHAGTDLGIIRTKAEPNDDGSFSITGTKIFITWGEHDMAENIIHLVLAKLPDAPK 223 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 G G FLVP+ + +DGS N ++ K+G +++AT + F G+L+G+ N Sbjct: 224 GPKGISLFLVPKFMVNDDGSLGERNQFSCGSIEKKMGIKASATCVMNFDGAKGWLVGEEN 283 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR-------------HVSGGILI 350 + M L I + SL A YA R + IL+ Sbjct: 284 KGLAAMFTMMNYERLGVGIQGIGAAEASLQSAREYANERIQSRAPTGAQQPEKAADPILV 343 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWC 404 P ++R + + + A S +A D +K R ++ P+ K + Sbjct: 344 -HPDVRRMLLTMKSYVEGGRAFSTYVAQWLDISKYSDNDEQRKHAEGMVALLTPVAKAFL 402 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GG G+I E + R+ I G+ +D++ G+ Sbjct: 403 TDRGLDTTIIGQQVFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQAMDLMGRKVVGSQ- 461 Query: 465 FEQLFSTLEQDLGS 478 +L+ QD+ + Sbjct: 462 -GKLYELFAQDVAA 474 >gi|195127930|ref|XP_002008420.1| GI11829 [Drosophila mojavensis] gi|193920029|gb|EDW18896.1| GI11829 [Drosophila mojavensis] Length = 414 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T + F N TFG + G Sbjct: 212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + + V LA+ I Y R G + + M+ IA I Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIFNFQSMQHQIATI 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA L++ A + +EAA A K++ ++A + ++ +GG Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCIDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR++ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410 >gi|169630123|ref|YP_001703772.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977] gi|169242090|emb|CAM63118.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus] Length = 384 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I ++ K D Y L+G K F+++ + +D I++AQ + G Sbjct: 130 IAMTEPGTGSDLQGIKTRAVKDGDH-YILNGAKTFITNGINADLVIVVAQTDPEKGALGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 ++ + G R +K+G + T EL F++ F +L+ +L Sbjct: 189 SLIVVERGMEGFERGRKLDKVGLDAQDTAELSFTDVRVPAANLLGEEGQGFIYLMKNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E M I A+M+ + M L E I Y R G + + +A++A Sbjct: 247 ---PQERMSI------AVMAAAAMESVLEETIAYTTERKAFGKPIKSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D + + ++ + E+AA A K++ + +I ++ GG G+ Sbjct: 298 DATVIRVMVDEFISLLNKEELSVEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGF 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYMDSRIQTIYGGTTEIM 376 >gi|302345814|ref|YP_003814167.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella melaninogenica ATCC 25845] gi|302149404|gb|ADK95666.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella melaninogenica ATCC 25845] Length = 558 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 152 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 211 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + +++K+G + T EL + N L G NV G ++ ++ Sbjct: 212 RGLSMFIYDKRNGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--NVRMGLIK--YVM 267 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L E + YA+ R G +++ P + ++ + + A Sbjct: 268 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKDRAQFGKKIVNFPAVYDMLSRMKAKLDAGR 327 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ A D K+ R E Y R+ P+ K + A Sbjct: 328 SLLYQTARYVDIYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 387 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +++ GGSG+I E R YR++ SI G+ V+ + + GT L Sbjct: 388 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL 438 >gi|262281607|ref|ZP_06059385.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262256983|gb|EEY75723.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 407 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257 L +TE GG+D+AA+ ++ + D Y +SG K F++S + +D + + + + + G Sbjct: 147 LAITEPSGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKSGAEG 205 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 206 ISMLLIDAQSEGITKTPLK-KMGWWASDTAHLHFDQVKVPASNLLGKENAGFKVIMNNFN 264 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 265 MERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLE 324 Query: 375 RLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + K + E + + +A T +C A++ +GG G++ Sbjct: 325 ETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 377 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 378 ERIYREVKVNMIGGGAEEIM 397 >gi|195020760|ref|XP_001985263.1| GH16965 [Drosophila grimshawi] gi|193898745|gb|EDV97611.1| GH16965 [Drosophila grimshawi] Length = 414 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y L+G K W +S ++ F++ A + G Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVLNGTKMWISNSDIAGVFLVFANAKPEDGYRG 211 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T + F N TFG + G Sbjct: 212 ITTFIVDRDTPGLIVNKPEDKLGIRASGTCMVTFDNVRVPEENILGTFGH---GYKYAAG 268 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + + V LA+ I Y R G + + M+ IA I Sbjct: 269 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATI 319 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA L++ A + +EAA A K++ ++A + ++ +GG Sbjct: 320 ATEIEAARLLTYNAARLQEAGVPFLKEAAMA-------KFYASEVAQRAATKCVDWMGGV 372 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR++ +I G+ N + + ++K Sbjct: 373 GFTRDFPQEKYYRDAKIGAIYEGTTNMQLSTIAKCIKK 410 >gi|206972823|ref|ZP_03233745.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|229182030|ref|ZP_04309326.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] gi|206731707|gb|EDZ48907.1| acyl-CoA dehydrogenase [Bacillus cereus AH1134] gi|228601445|gb|EEK58970.1| Acyl-CoA dehydrogenase [Bacillus cereus 172560W] Length = 397 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G V C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ I D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|227501345|ref|ZP_03931394.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] gi|227216479|gb|EEI81888.1| butyryl-CoA dehydrogenase [Anaerococcus tetradius ATCC 35098] Length = 378 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 36/277 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 LTE GTD + GQK DG Y L+G K F+++ +D +++ A + G Sbjct: 122 FALTEPDAGTD-----ASGQKTVAKLDGDHYVLNGTKIFITNAGYADTYVVFAMTDKEQG 176 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDM 312 + + + G + ++K+G + ++T+EL F D V + E+ Sbjct: 177 TRGISAFIVEKGMEGFDFGTTEDKMGIKGSSTMELIFR--------DCKVPKENLLGEEG 228 Query: 313 KILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 K Y LD + ++ + +AE AI Y + R+ G L + +A++A Sbjct: 229 KGFKYAMQTLDGGRIGIAAQALGIAEGALDKAIKYVKERNQFGRPLAKFQNTQFKLAEMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +DI +A L ++ A D +S + + A K ++A V +A++ GG G Sbjct: 289 IDIESARHLVYKAAWLKDNKESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 YI E + R R++ I G+ M++ V L K Sbjct: 342 YIREYEVERMMRDAKITEIYEGTSEVMLMVVSGALLK 378 >gi|225561551|gb|EEH09831.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus G186AR] Length = 429 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K G Y ++G K W +S + FI+ A Sbjct: 158 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTPSG-YKINGSKMWITNSIEAGFFIVFAN 216 Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 ++ G + ++E G+P G + + K+G R+++T L F + + N+ Sbjct: 217 LDPSKGYKGITAFMVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 272 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIA 360 + K I L+ + ++ LA A + R G ++ + M+ +A Sbjct: 273 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVA 332 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +IAAA AL + A + + ++AA A++ A ++A V A+E +G Sbjct: 333 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKLYA-------SQVAGRVAGSAVEWMG 385 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G G++ E + +R+S +I G+ N + + +L+K Sbjct: 386 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 425 >gi|62511251|gb|AAX84220.1| acyl-CoA dehydrogenase [Bacillus thuringiensis] Length = 397 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G V C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ I D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|149378151|ref|ZP_01895869.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893] gi|149357555|gb|EDM46059.1| glutaryl-CoA dehydrogenase [Marinobacter algicola DG893] Length = 389 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 26/242 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ +K+ DG Y +SG K W +SP++D ++ A++EG++ F++ Sbjct: 134 FGLTEPNHGSDPGNMETRAKKV-DGGYLVSGSKTWITNSPIADVCVVWAKLEGKITGFVI 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--TGPVEDMKILI 316 R +G+ GL +++ K R++ T + F L+V GP Sbjct: 193 ER---EGA-KGLDTPKIEGKFSLRASETGSIFMDEVFVPDENKLDVEGLKGPFS------ 242 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A +S + AE A++Y R G L ++++ +AD+ +I Sbjct: 243 CLNKARFGISWGSLGAAEFCWHAALNYTLERKQFGKPLAANQLIQKKLADMQTEITLGLQ 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +L D Y+ + K C A + A + GG+G +E + Sbjct: 303 GALQLGRMIDAGN-------YSTDAISMLKRNNCGKALDIARVARDMHGGNGIADEYHVI 355 Query: 432 RH 433 RH Sbjct: 356 RH 357 >gi|83943210|ref|ZP_00955670.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36] gi|83846218|gb|EAP84095.1| acyl-CoA dehydrogenase [Sulfitobacter sp. EE-36] Length = 380 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 28/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + ++G Y L+G K F+S SDA++ + + + Sbjct: 124 LTEPGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDDGAAGVSTV 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 +EDG+ GL + L++K+G RS T +++F D N+ G + E+ K Y Sbjct: 183 YVEDGTA-GLSFGGLEDKMGWRSQPTSQVQFD--------DCNIPAGNLVGEEGKGFKYA 233 Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A S+ + +L + Y R G + ++ +A++ +++ AA Sbjct: 234 MMGLDGGRLNIAACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D A A + K + + V+ + ++ GG GY+ + Sbjct: 294 RVFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368 >gi|83954345|ref|ZP_00963065.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83841382|gb|EAP80552.1| acyl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] Length = 380 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 28/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + ++G Y L+G K F+S SDA++ + + + Sbjct: 124 LTEPGSGSDAAALKTKCTRTNEG-YTLNGTKAFISGGGYSDAYVAMVRTSDDGAAGVSTV 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIY- 317 +EDG+ GL + L++K+G RS T +++F D N+ G + E+ K Y Sbjct: 183 YVEDGTA-GLSFGGLEDKMGWRSQPTSQVQFD--------DCNIPAGNLVGEEGKGFKYA 233 Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A S+ + +L + Y R G + ++ +A++ +++ AA Sbjct: 234 MMGLDGGRLNIAACSLGAAQTALNATLTYMGERKAFGKPIDQFQGLQFRLAEMEIELQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D A A + K + + V+ + ++ GG GY+ + Sbjct: 294 RVFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 348 IEKLVRDLRVHQILEGTNEIM 368 >gi|307294165|ref|ZP_07574009.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306880316|gb|EFN11533.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 579 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 51/342 (14%) Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 AG+ M + + + A T +V + P+I R + + L+E + Sbjct: 119 AGYPMLTAANARLIAAFGTPAQVDRFARPQIEGRWFGT--------------MCLSEPQA 164 Query: 208 GTDIAAITSQ----GQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQV--------E 250 G+ + I ++ G+ G Y LSG+K ++S+ + ++LA++ E Sbjct: 165 GSSLGDIRTRAVADGEDELGGRYRLSGNKMWISAGDQNVSENIVHLVLAKIAQQDGGLPE 224 Query: 251 GRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVS 305 G G F+VP++L DG+ N L L +K+G R A L F + G+ +G Sbjct: 225 GSKGISLFIVPKILPDGTRNDLAVAGLNHKMGFRGTANCLLNFGEGAGAVGWRVGGEGQG 284 Query: 306 TGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------LIDQPV 354 + + +I + + +A ++ G R SL A + R V G+ + + P Sbjct: 285 LAQMFMMMNEARISVGMGAAALAYRGYRQSLRYAQERLQGRAV--GVRNGAPIPIFNHPD 342 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++R + A AL A D+ +E ++ P+ K W + Sbjct: 343 VRRMLLQQKAYAEGALALCLYCARLVDQGGEDAE--TLLALLTPVAKSWPSEFGLIANDL 400 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A++ GG GY + + + +R++ N I G+ +D+L Sbjct: 401 AIQVHGGYGYTRDFDVEQLWRDNRLNPIHEGTTGIQAIDLLG 442 >gi|217972707|ref|YP_002357458.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella baltica OS223] gi|217497842|gb|ACK46035.1| acyl-CoA dehydrogenase domain protein [Shewanella baltica OS223] Length = 389 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D + L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RFILNGNKMWITNGPDAHTYVIYAKTDLTKGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERDSKGFSQAQKLDKLGMRGSNTCELVFEDV---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M + + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMNSCMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A S D ++ ++AA A + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYAVAKSCDRGETTRKDAAGAIL-------YSAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|115655541|ref|XP_796528.2| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase [Strongylocentrotus purpuratus] gi|115969289|ref|XP_001195179.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase [Strongylocentrotus purpuratus] Length = 461 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/271 (21%), Positives = 129/271 (47%), Gaps = 35/271 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEG 251 L ++E G+D+ ++ + +K G Y L+G+K+++++ DA ++L A+ + Sbjct: 200 LAMSESGSGSDVLSMRLKAEK-KGGYYVLNGNKFWITNG-CDADVLLVYAKTDLSAEAKD 257 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304 V F++ + +E G + +K+G R ++T EL F N G + +N+ Sbjct: 258 GVTTFIIEKGME-----GFRSAQKVDKLGMRGSSTCELVFEDCKVPVENVLGGVNRGVNI 312 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + +++I A + M+ + AI Y +R G + + +M+ +AD+ Sbjct: 313 LMSGLNIERLII----ATAPIGIMQACMDVAIPYVHQRKQFGRPIGEFQLMQGKMADMYS 368 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A + + +A + D ++ +A + A + A V +A++C+GG+GY Sbjct: 369 RLNACRSYVYNVARAMDRGHITNKNSAAVALFA-------AENATQVALDAIQCLGGNGY 421 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVL 455 I + + R R++ N I G+G + ++ ++ Sbjct: 422 IFDYPVGRFLRDAKLNEI--GAGTSEIIRLI 450 >gi|313225748|emb|CBY07222.1| unnamed protein product [Oikopleura dioica] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 27/268 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGR 252 GL +TE G+D+ ++ + K D Y ++G+K W + P++D ++ A+ +GR Sbjct: 382 GLAMTELNAGSDVMSMKTNAVKKGD-FYVINGNKFWITNGPVADHIVLYAKTNPSSNDGR 440 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307 + F++ D G Q + K+G R + T +L F N L G+ + + Sbjct: 441 SITAFII-----DTKTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAV 495 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + I L +AI V + ++ A YA R + + +++ +AD+ ++ Sbjct: 496 LMSGLNIERILAAAI-PVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLS 554 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + +A D+ + + + A + +C + A + +A++ +GG+G+I + Sbjct: 555 ACRSYLYNVARHADKNEPTNHDCAGLVL-------YCAEKATQICLDAVQILGGNGFIND 607 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455 R+ R++ I G+G + V V+ Sbjct: 608 YPTGRYLRDAKLWEI--GAGTSEVRRVI 633 >gi|229070970|ref|ZP_04204197.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] gi|228712152|gb|EEL64100.1| Acyl-CoA dehydrogenase [Bacillus cereus F65185] Length = 397 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G V C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPVAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ I D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMITDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|198421914|ref|XP_002127780.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase [Ciona intestinalis] Length = 429 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 170 LAMSEPGSGSDVVSMKLKAEKKGD-YYVLNGSKFWITNGPDADTLVVYAKTDIAAEAQGI 228 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLV + +E G + +K G R + T EL F N L V + Sbjct: 229 TAFLVEKGME-----GFSTAQKLDKFGMRGSNTCELVFENCKVPAKNTLGAYNRGVYVLM 283 Query: 314 ILIYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L+ ++S + M+ L A Y +R G + + +M+ +AD+ ++A Sbjct: 284 SGLDLERLVLSAGPIGLMQAVLDTAFPYMHQRKQFGQNIGEFQLMQGKMADMYTKLSACR 343 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + +A + D+ + + A + A + A V + ++C+GG+GYI + Sbjct: 344 AYMYGIARACDKGHFNNRDCAGVILYAA-------EAATQVALDGIQCLGGNGYINDYPT 396 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 397 GRFLRDAKLYEIGAGT 412 >gi|159185755|ref|NP_357135.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|159140889|gb|AAK89920.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 375 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 26/261 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG--- 254 G LTE + G+D + + ++ ++ D Y L G K F++S + D I+ A + G Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-RYVLDGAKQFITSGKNGDVIIVFAVTDAAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R++ K+G S+ T ++ F+ + DL + Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSSDTCQIAFTEMA--VPVDLRLGEEGQGYR 231 Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L L+ + ++ V +A+A YAR R G +I+ + +AD+A I Sbjct: 232 IALANLEGGRIGIAAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMATRIT 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L A + + EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 292 AARQLVLHAAALKEAGEPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMAD 344 Query: 428 RSIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 345 YPVERIYRDVRICQIYEGTSD 365 >gi|146071671|ref|XP_001463171.1| acyl-coenzyme a dehydrogenase [Leishmania infantum] gi|134067254|emb|CAM65522.1| putative acyl-coenzyme a dehydrogenase [Leishmania infantum JPCM5] Length = 416 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 17/249 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + +++ + +LA+ EG F+V Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-TGPVEDMKILIYLD 319 D G+ + + +G R + T + F N + + G MK+ + Sbjct: 221 ---DADTPGVTLGQKEVMLGQRCSDTRGIMFENVVVPEENVVGEAGKGFQVAMKVFDFTR 277 Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 SA+ +S G+ R + EA YAR R G + + +A++A + A +++R Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + A+ A++MA +A A++ GG+GY + + YR+ Sbjct: 338 WETDQGRRNTYCASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390 Query: 438 PANSILLGS 446 SI G+ Sbjct: 391 KIFSIYEGT 399 >gi|159900084|ref|YP_001546331.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893123|gb|ABX06203.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 382 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 32/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGR------ 252 GLTE G+D A +++ + DG + ++G K ++++ ++ + + Sbjct: 123 FGLTEPHAGSD--AGSTRTTAVRDGNEWVINGAKMWITNAAEAGHLIATAITNKDRGKRG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVED 311 + ++P+ G+P G+ + ++K+G R + T + F N L L G V+ Sbjct: 181 ISAIIIPK----GTP-GVHFGSPEHKMGLRGSNTHAITFDNVRVPLENLLGAEGDGFVQF 235 Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +K+L D +S+ M + L A+ YAR R G + + +AD+ ++ Sbjct: 236 LKVL---DGGRISIGAMAIGLGVAAMEAAVSYARERQAFGHAIGSYQSISNMLADMDTEL 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L R A + K + EAA A++ A C+ A++ GG GY Sbjct: 293 EAARLLILRAAWLKENGKPFTREAAIAKLYASEASERACR-------NAVQIFGGYGYSS 345 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 E + R+YR++ + +G G + +L ++ Sbjct: 346 EYPVERYYRDT--RLLTIGEGTSEILRMV 372 >gi|86139734|ref|ZP_01058301.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85823625|gb|EAQ43833.1| acyl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 378 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 28/279 (10%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 K+ S E P+ + +G++E G+D+AA+ ++ ++ D + ++G K W Sbjct: 100 KLGSDEIRKKYIGPLLAGEITASMGISEPNVGSDVAAVKTRARRDGDD-WVINGEKTWIT 158 Query: 236 SSPMSDAFI-MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------V 287 + SD I A EG + +L D +G + +K K+G + +T V Sbjct: 159 NGRFSDFLICTCATDEG------LTHILVDRKEHGYETRDIK-KMGLNAQSTAQIFLDDV 211 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 + +NT G + L + E ++ + A+ +S R +L E+I YA+ R+ G Sbjct: 212 RVPIANTIGEVGRGLQQTLVVFERARVHM----AMWGISLARRALEESIRYAQERNQHGK 267 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + ++ IA +A +I AA L+ R A D + +E A A K++ ++ Sbjct: 268 QIAGHQLIADKIAVMATEIDAARLLTLRAAGMIDRGERCDKECAMA-------KWYGTEI 320 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A +A++ GG+G + + R RE+ I G+ Sbjct: 321 AVNATRQAVQIHGGNGVTTDFIVERLAREAIIGPIPDGT 359 >gi|331003827|ref|ZP_08327319.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167] gi|330412019|gb|EGG91416.1| acyl-CoA dehydrogenase [Lachnospiraceae oral taxon 107 str. F0167] Length = 384 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 43/279 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247 P+ K LTE GTD ++ + DG Y L+G K F+++ +D ++++A Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAQGAVTKA--VLDGDDYVLNGSKIFITNGKEADIYVVIA 170 Query: 248 QVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 E GR ++E +P G + + K+G R ++T EL F+ D Sbjct: 171 CTEIKVDAKGRQKKIFSAFIVEKDTP-GFGFGTKEKKMGIRGSSTYELIFT--------D 221 Query: 302 LNVSTGPVEDM--------KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGG 347 V P E+M I ++ LD + ++ + +AE I Y + R G Sbjct: 222 CRV---PKENMLGPAGKGFGIAMHTLDGGRIGIAAQALGIAEGALERTIAYVKERKQFGR 278 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + + +A++A + AA L +R A + K+ SEEAA A++ A ++ Sbjct: 279 SIGAFQNTQFELANMATKVKAAQMLVYRAAMAKATQKTYSEEAAMAKLFA-------AEV 331 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY E I R R++ + G+ Sbjct: 332 AMEVTTKAVQLHGGYGYTREYEIERMMRDAKITEVYEGT 370 >gi|299533488|ref|ZP_07046868.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298718545|gb|EFI59522.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 392 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 31/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGRV 253 +G++E G+D++ I S +K D Y +SG K W +S +D ML V Sbjct: 123 IGVSEPGAGSDVSGIKSHARKDGDD-YVISGQKMWITNSIQADWMCMLVNTGDGPVHKNK 181 Query: 254 GCFLVPRLLEDGSPNGLCY-----QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 +VP L +G L Q+L+ KIG S+ T L F +L+G Sbjct: 182 SLIMVP--LREGPRGKLTRGVEVAQKLR-KIGMNSSDTGLLFFDEVRVPQRYLVG--QEG 236 Query: 306 TGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G + M+ + S SG M + + I +A++R + G LIDQ ++ +A++ Sbjct: 237 QGFIYQMQ-QFQEERLWASASGLLAMEDCIQQTIEWAQQRQMFGSTLIDQQWVQFKLAEL 295 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ A AL++R A + + + A+ A++ + ++ V ++ GG Sbjct: 296 QTEVEALRALTYRAAQIYMAGQDALQLASMAKLKSG-------RLTREVADTCLQFWGGM 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMV 451 G+ + ++R YR+ SI G+ M+ Sbjct: 349 GFTWDNRVSRLYRDGRLGSIGGGADEVML 377 >gi|99080573|ref|YP_612727.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040] gi|99036853|gb|ABF63465.1| isovaleryl-CoA dehydrogenase [Ruegeria sp. TM1040] Length = 387 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRND-RFVLNGNKYWITNGPDADTLVVYAKTDPGAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + G + +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEFKGFSTSKHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ + E + Y R G + + +M+ IAD+ + A Sbjct: 247 ERVVLAGIGTGIMASC-----MDEMMPYMAERKQFGQPIGNFQLMQGKIADMYTAMNTAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGGSGYIE 426 A + +A + D+ ++AA CC A V +A++ GG+GY+ Sbjct: 302 AYVYEVAKACDKGTVTRQDAAA-----------CCLYASEVAMTQAHQAVQAFGGAGYLS 350 Query: 427 ERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 351 DNPVGRIFRDAKLMEIGAGT 370 >gi|154251231|ref|YP_001412055.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155181|gb|ABS62398.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 586 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 51/299 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR-- 252 + LTE + G+D+ A+ ++ DG Y +SG K +++ D ++LA++ Sbjct: 161 MNLTEPQAGSDLNALKTKAVPQGDGTYRISGTKIYITYGDHDMAENIVHLVLARLPDAPP 220 Query: 253 ----VGCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299 + FLVP+ L EDGS + C L+ K+G + T + + G L+ Sbjct: 221 GTKGISLFLVPKFLVNEDGSLGARNDAWCIG-LEEKLGIHGSPTCVMSYGENGGAIGTLI 279 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVS---GGIL-- 349 G N + M +++A + V V++AEA + YA+ R G L Sbjct: 280 GQENRGLACMFTM-----MNNARLLVGTQGVAIAEAAYQHALAYAKDRKQGRPLGSTLAP 334 Query: 350 ------IDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 I+ P ++R ++ D + I ATA++ A++ D+ R E A A ++ Sbjct: 335 GEMAPIIEHPDIRRMLLTMKSLTDASRAICYATAVAIDGAHAGDK---REEAQARADLLT 391 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K + + V + ++ GG G+IEE A+ R++ I G+ +D+++ Sbjct: 392 PIAKSFSTDIGVEVASIGVQIHGGMGFIEETGAAQFLRDARILPIYEGTNGIQAIDLVS 450 >gi|326381781|ref|ZP_08203474.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL B-59395] gi|326199207|gb|EGD56388.1| acyl-CoA dehydrogenase domain protein [Gordonia neofelifaecis NRRL B-59395] Length = 385 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLA------QVEG 251 + +TE G+D+A + + + DG Y L+G K F++ + +D I+ A + + Sbjct: 124 IAMTEPGTGSDLAGMRTTAKLSEDGSHYVLNGAKTFITGGVNADRVIVCARTSPPSETDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L L+ D G R +K+G R++ T EL F+ D+ V PVED Sbjct: 184 RFGITL---LVVDTKAEGYAVGRKLDKLGLRTSDTAELSFT--------DVKV---PVED 229 Query: 312 M-----KILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + K YL A+ + + ++ A Y R+V G + K Sbjct: 230 LLGEENKGFSYLGQHLPRERLSIALSAYAQGAAAVRFAKEYTLERNVFGKPVASFQNTKF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A + A A+ R ++D + + +AA A++ +C + A VI ++ Sbjct: 290 ELAACKAKVDAMEAVVDRALEAYDRHELSAADAASAKL-------FCTEAAADVIDRCLQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 343 LHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375 >gi|259415585|ref|ZP_05739506.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp. TrichCH4B] gi|259348815|gb|EEW60577.1| acyl-coa dehydrogenase, short-chain specific [Silicibacter sp. TrichCH4B] Length = 378 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 24/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLVPR 260 LTE G++ A + S + DG Y L G K F+S+ FI++ A+ + VG V Sbjct: 124 LTEPMAGSNPADMRSTATRDGDG-YWLKGSKCFISNAGEADFIVVYAKTDSAVGARGVSA 182 Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDMK 313 ++E G +G+ + + +G R + F N G + TG MK Sbjct: 183 FVVEPGKTDGVEIGKREETMGLRGGHVFPISFDCRVPAENQLG------DEGTGFRTAMK 236 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L ++ A + R +L A+ YA+ R V G + ++ +AD A ++AAA A Sbjct: 237 VLDNGRIEVAAQATGIARAALGAAVSYAKEREVGGRPIGSFQGLQWMLADSATELAAARA 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + S ++A+A K + + A + A++ GG GY + + Sbjct: 297 LGLQAARKRGTGERYSTDSAFA-------KLYASEAAWRIADRALQIHGGYGYTRDFPLE 349 Query: 432 RHYRE 436 R+ R+ Sbjct: 350 RYLRD 354 >gi|56461063|ref|YP_156344.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR] gi|56180073|gb|AAV82795.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR] Length = 594 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 132/343 (38%), Gaps = 53/343 (15%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 + P +TS +++A+ + + + + P++ S E+ T + LTE GT Sbjct: 127 LYPGLTSGAIMAINSHGSDELKNHYLPRMVSGEWTGT-------------MCLTEPHAGT 173 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFIML---------AQVEGRVGCFL 257 D+ I S+ DG + LSG K F++ ++D + L A +G + F+ Sbjct: 174 DLGIIRSKAIPAQDGSFSLSGTKIFITGGEHDLTDNIVHLVLAKLPDAPAGTKG-ISLFV 232 Query: 258 VPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 VP+ L D N + +++K+G ++AT + F +L+G+ + + M Sbjct: 233 VPKFLSDEQGNLTERNNVSCGSIEHKMGIHASATCVMNFDGAKAWLVGEPHRGLPAMFTM 292 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG-------------ILIDQPVMKRAI 359 L I + S A+ YA+ R G IL+ V +R + Sbjct: 293 MNYERLGVGIQGLGAAERSYQNALEYAKDRIQGRGAKATRNDQAEADSILVHGDV-RRML 351 Query: 360 ADIALDIAAATALSFRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + A S + D +K R + A ++ P+ K + Sbjct: 352 LTMKSLTEGGRAFSTWVGQQLDRSKYAGDDQVRQKADAMVALLTPVAKAFLTDTGLESTI 411 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GY+ E + R++ I G+ LD+L Sbjct: 412 HGQQVFGGHGYVREWGQEQLVRDTRIAQIYEGTNGIQALDLLG 454 >gi|319651583|ref|ZP_08005710.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317396650|gb|EFV77361.1| CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 379 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 44/279 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------V 253 GLTE G+D + + DG Y ++G+K F+++ + L V G + Sbjct: 123 FGLTEPNAGSDAGGTRTTAVE-KDGEYIINGNKCFITNASYAKHLALTAVTGEKDGKKEI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312 +VP E G K+G L SNT +L D+ V P E + Sbjct: 182 SAIIVPTDAE-----GFTVIDNYEKMG--------LNASNTTELVLEDVRV---PTEHLL 225 Query: 313 --------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 + LI LD + + M + +A+A + YA+ R G L D ++ + Sbjct: 226 GKKGEGFKQFLITLDGGRIGIGAMALGIAQAAYDKALQYAKERKQFGRSLSDFQAIQFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A+ I A + ++ A D+ + ++EA+ + K + ++ + +A++ Sbjct: 286 ADMAMKIELARNMVYKAAWLKDQGRPFAKEAS-------MCKLYASEICMEIADQAVQIH 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GG GY+++ + R+ R+ I G+ + + L+ Sbjct: 339 GGYGYMKDYHVERYMRDGKLTEIGEGTSEVQRMVIARLI 377 >gi|167566833|ref|ZP_02359749.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis EO147] gi|167573902|ref|ZP_02366776.1| acyl-CoA dehydrogenase [Burkholderia oklahomensis C6786] Length = 383 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + +K D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTAARKDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R+R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R YR++ SI G+ M+ Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370 >gi|120610662|ref|YP_970340.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589126|gb|ABM32566.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 399 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 23/265 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K + G Y L G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAHKTAGG-YKLKGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 174 SPIADVFVVWAKEVSESGAVGPIRGFVLEKGM-QGLTAPAIHGKVGLRASITGEIVMDDV 232 Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348 F + + N V+ +K L+SA ++ + AE A Y R G Sbjct: 233 F---VPEENAFP-EVQGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRP 288 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +IA RL DE + E + I K C A Sbjct: 289 LAANQLIQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCGKA 341 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 342 LDIARMARDMMGGNGISDEFGVARH 366 >gi|148547441|ref|YP_001267543.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148511499|gb|ABQ78359.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 594 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + A + LTE GTD+ I ++ + +DG +SG K F++ D + Sbjct: 159 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 218 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP+ L + G+ N + +++K+G +++AT + F Sbjct: 219 VLAKLPDAPAGAKGISLFLVPKFLVEADSRLGARNAVHCGSIEHKMGIKASATCVMNFDG 278 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352 G+L+G+ N + M L I + S A YA R S Q Sbjct: 279 AIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 338 Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 P++ R + + A +A ++A R + Sbjct: 339 HDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 399 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 458 Query: 456 N 456 Sbjct: 459 G 459 >gi|322495519|emb|CBZ30824.1| putative acyl-CoA dehydrogenase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 411 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255 LTE G+D A+ ++ +K + ++G K ++++ + F+++A + G C Sbjct: 144 LTEAGSGSDAFALNTKAEK-KGSKWVINGSKLYITNGGWAGIFLVMATADPSKGYKGITC 202 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V + G+ R +NK+G R+++T EL F N + + NV + KI Sbjct: 203 FVV----DSSETPGVSVVRTENKLGIRASSTAELRFENV---EVSEENVIGEVGKGYKIA 255 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + + V +A+ + Y +R G + D M+ A+ A+++ AA Sbjct: 256 INILNEGRIGIGAQMVGIAQGSLDIVMPYLFQRKQFGKFIGDFQGMQMQYAECAMELHAA 315 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + ++ ++AA A KY+ +A + A+E GG G++++ Sbjct: 316 RLMVYNASRKKQNNEAFIQDAAMA-------KYFASVVAEKTASRAVEWAGGVGFMKDFG 368 Query: 430 IARHYRESPANSILLGS 446 + R YR++ +I G+ Sbjct: 369 LERFYRDAKIGAIYEGT 385 >gi|307726730|ref|YP_003909943.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] gi|307587255|gb|ADN60652.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1003] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 20/253 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + ++ D Y L+G K F+S+ +D + A + G Sbjct: 128 LTEPHAGSDTAALRATARRDGDH-YVLNGTKQFISNGSEADVGVAFAITDKAAGKRGAST 186 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 + D G R++NK+G + T ++ +N G G + D + Sbjct: 187 FIIDPKAPGYHVTRVENKLGQHTAHTAQISLEDYRVPAANLLGAEGDGYRTVMGGLCDGR 246 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I +A ++ R +L A+ YAR R G +I + +AD+A + A Sbjct: 247 IGIGFIAAGVA----RAALDAAVRYAREREAYGAPIIKLQGVAFDLADMAAQVEVALQYC 302 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A D +EA+ I K + ++A V ++A++ GG GY+ + ++ R+ Sbjct: 303 VHAARLRDTGADCIKEAS-------IAKMFASEIAEKVCSDALQIHGGYGYLTDFAVERY 355 Query: 434 YRESPANSILLGS 446 R+ I G+ Sbjct: 356 LRDVRICKIYEGT 368 >gi|284167566|ref|YP_003405844.1| acyl-CoA dehydrogenase [Haloterrigena turkmenica DSM 5511] gi|284017221|gb|ADB63171.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 27/271 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC---- 255 L+E G+D+ A+ + +K D G W + ++D + A+ + G Sbjct: 123 FALSEAGAGSDVPAMETTAEKAGDEYVVNGGKLWISNGSVADTVTLFAKTDPDAGSKGIS 182 Query: 256 -FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 F+V R ED +G + + K+G++ T EL F + LLG+ G V+ Sbjct: 183 SFIV-RPEED---DGFIVEGTEEKLGDKGCPTAELRFDDLRIPENRLLGE--EGEGFVQA 236 Query: 312 MKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +K L + A SV + +L EA Y++ R + D ++ +AD+ AA Sbjct: 237 LKTLNGGRITIAARSVGIAQAALDEARKYSQDREQFDRPISDFQAIQHKLADMDTKTRAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A+ ++ +EAA A++ + +++ + E ++ GG GY ++ + Sbjct: 297 RLLMHDAADRKMRGENFVKEAAQAKL-------YASEVSREIANEGIQIHGGYGYTKDFA 349 Query: 430 IARHYRESPANSILLGSG----NAMVLDVLN 456 R YR++ N I G+ N + ++LN Sbjct: 350 AQRFYRDAKLNEIYEGTSEVLRNTIARELLN 380 >gi|300778917|ref|ZP_07088775.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] gi|300504427|gb|EFK35567.1| acyl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] Length = 379 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 40/288 (13%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 K S E P+ V L+E G+D + + + D Y L+G K W Sbjct: 100 KFASEEQKVKYLTPLASGQVIGAFALSEPEAGSDATSQKTTAEDKGD-YYLLNGIKNWIT 158 Query: 236 SSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 + + +I++AQ + + F+V R E G ++K+G R + T L Sbjct: 159 NGGTASYYIVIAQTDPEKKHKGINAFIVERGWE-----GFEVGPKEDKLGIRGSDTHSLI 213 Query: 291 FSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 F+N FGF ++ G I + S + ++ LA + Y Sbjct: 214 FNNVKVPKENRIGEDGFGFNFAMAVLNGGR-------IGIASQALGIASGAYELA--LKY 264 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A+ R +I+ + +AD+A I AA L F+ A D K SE A A++ Sbjct: 265 AKTRKAFKTEIINHQAIAFKLADMATQITAARMLCFKAACEKDAGKDISESGAMAKL--- 321 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++A EA++ GG GY++E + R R++ I G+ Sbjct: 322 ----YASQVAMDTTIEAVQIHGGYGYVKEYHVERLMRDAKITQIYEGT 365 >gi|225621130|ref|YP_002722388.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1] gi|225215950|gb|ACN84684.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1] Length = 639 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 19/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 GLTE G+D + + D Y L+G K F+++ + ++++++ A +G + Sbjct: 124 FGLTEPEAGSDAGGTETTAELKGDH-YILNGEKIFITNSIEAESYVVFAVTTPGIGTKGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R++AT +L F N + N+ + KI + Sbjct: 183 SAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNV---KVPKENLLGKEGQGFKIAMQT 239 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A+ A+ Y++ R G + Q + +AD+A + AA L Sbjct: 240 LDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAFKLADMATKLRAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA- 431 + A D + E+A A++ + ++ V+ +A++ GG+GYI+ I Sbjct: 300 IYSAAAMKDRHEPYGTESAMAKL-------YASEIGLEVVNQALQIHGGNGYIKGAYIVE 352 Query: 432 RHYRESPANSILLGS 446 R YR++ +I G+ Sbjct: 353 RAYRDAKICTIYEGT 367 >gi|218783094|ref|YP_002434412.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764478|gb|ACL06944.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 414 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 29/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV------EGRVG 254 LTE RGG+D T+ D + L+G K F+ + +D F++ A+ + + Sbjct: 127 LTEPRGGSDFFGATTTAVDKGDH-FILNGQKRFIVGAEGADYFLVYAKTNPDAKPQESLS 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTG 307 C +V R P G+ + L +G R + F N G + G V T Sbjct: 186 CLIVDR-----GP-GVNVEYLYGLMGCRGGGAGRIVFKDVKVPKENVVGKVHGAYPVFT- 238 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M I L +A M++ R +L A Y RR G + + + IA+ A+ + Sbjct: 239 ---TMMIPERLGTAAMTIGSARPALDVATGYTTRRKAFGQTINNFQGVNFQIAEAAMLLD 295 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A +L + S D A A R M TK + + V+ AM+ +GG GY Sbjct: 296 ACRSLVYTTGRSADIAPY----AGQTRRMVSETKKFVTESCQKVVHNAMQVMGGIGYTNV 351 Query: 428 RSIARHYRESPANSILLGSGNAMVL 452 + R YR+ +I GS M + Sbjct: 352 FPVERMYRDLRLATIWTGSNEVMSM 376 >gi|119873447|ref|YP_931454.1| acyl-CoA dehydrogenase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674855|gb|ABL89111.1| acyl-CoA dehydrogenase domain protein [Pyrobaculum islandicum DSM 4184] Length = 380 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 34/286 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + I L+E G+D ++ + +++ G + ++G K W S +DAF++ A+ Sbjct: 112 PAIRGEKIIAFALSEPCCGSDAFSLETTAERVG-GSWVINGTKLWITSGLYADAFLVAAR 170 Query: 249 V------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGD 301 V FLV R G C + + G R T E++F+N +GD Sbjct: 171 TGSPKEKHKTVTLFLVER--------GRCVETAPVAVMGVRGTGTAEVKFNNC---EVGD 219 Query: 302 LNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVM 355 + G K+++ L++ V + + +A EA Y +RR +I+ V+ Sbjct: 220 EAIVGGLNGAFKVVLEDLNNGRTCVGAIGLGIAQGAIKEAESYTKRRVAFDMPIINFQVV 279 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + IA I I A + + A R + + + A I KY ++A A Sbjct: 280 QHYIASIKAQIEAVRGVVY------TAAYFRDKNSELFPLYAQIAKYLGSRLAVDATRTA 333 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEK 460 M+ +GG GY + + YR++ A I G+ N +VL+ L L EK Sbjct: 334 MQIMGGFGYSTDSKVEMLYRDAKATEIYEGA-NEIVLNTLFKLAEK 378 >gi|9965284|gb|AAG10019.1|AF282240_3 acyl-CoA dehydrogenase [Acinetobacter sp. SE19] gi|14587418|dbj|BAB61751.1| acyl-CoA dehydrogenase [Acinetobacter sp. NCIMB9871] Length = 384 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 20/244 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A++ + K D Y L+G K +++ +P + F ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTAVKDGDH-YILNGTKRYITNAPHAGVFTVMARTSTEIKGTGGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL- 315 + D G+ + K+G + T ++ F N L+G + G MK+L Sbjct: 183 AFIVDSKTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVE-GVGFKTAMKVLD 241 Query: 316 ---IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 I++ A +SV L +++ YA R G + + +++ +AD +I AA + Sbjct: 242 KGRIHI--AALSVGAATRMLEDSLQYAVERKQFGQAIANFQLIQGMLADSKAEIYAAKCM 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A D ++ S EA+ A++ A +M V ++ GG+GYI E +I R Sbjct: 300 VLDAARLRDAGQNVSTEASCAKMFA-------TEMCGRVADRGVQIHGGAGYISEYAIER 352 Query: 433 HYRE 436 YR+ Sbjct: 353 FYRD 356 >gi|71650517|ref|XP_813955.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70878886|gb|EAN92104.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 407 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 30/309 (9%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 VH IF R + A P +S LTE G+D A+ ++ +K D + Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ +D F+++A V+ G CF+V + +G+ R +K+G Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335 R+++TVE+ F N + + NV + +I I L+ + + V +A+ Sbjct: 229 LRASSTVEINFENC---EVPEENVIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + Y +R + D ++ A A +I AA + + A +S +EAA A+ Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKKLMGESFVKEAAMAK 345 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + ++A ++A+E GG G+ + S+ R YR++ +I G+ + + Sbjct: 346 LFGS-------QVAEQTASKAIEWAGGIGFTRDFSLERLYRDAKIGAIYEGTSIIQLQTI 398 Query: 455 LNLLEKGTN 463 L++K N Sbjct: 399 AKLIKKEYN 407 >gi|329849515|ref|ZP_08264361.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19] gi|328841426|gb|EGF90996.1| glutaryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19] Length = 395 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A+ S+ +KI DG Y L+G K W +SP++D F++ A+ + G + Sbjct: 137 FGLTEPDAGSDPGAMRSKAEKI-DGGYRLTGTKMWISNSPIADVFVVWAKSDAHNGEIKG 195 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ + LL +++ GP Sbjct: 196 FVLEKGMK-----GLTAPKIHGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP---- 246 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A ++ + AE A Y R G L + ++ +AD+ +I Sbjct: 247 --FGCLNRARYGIAWGVMGAAEDCWHRARQYGLDRKQFGKPLAQMQLFQKKLADMQTEIT 304 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + R+ FD K E M + K C A + A + GG+G EE Sbjct: 305 LGLQAALRVGQLFDAGKVAPE-------MISLIKRNNCGKALDIARVARDMHGGNGIHEE 357 Query: 428 RSIARH 433 + RH Sbjct: 358 YHVMRH 363 >gi|219847668|ref|YP_002462101.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541927|gb|ACL23665.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM 9485] Length = 417 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE GTD AA+ + ++ D +Y L+G K W + ++D F++ A+ + G + Sbjct: 140 LTEPNSGTDAAAMQATARRDGD-VYILNGEKIWISLADLADNFLVFAKTDPAAGPRGITA 198 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314 + + + G+ + K+G R+ NT G + D+ V E KI Sbjct: 199 FIVERTMPGVSSYPIHGKLGVRAG--------NTGGVVFQDVRVPLSHRLGEEGEGFKIA 250 Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD+ +V+ ++ SL +I YAR R G + + ++KR I+ + + + Sbjct: 251 MAALDNGRYTVAAGATGLIQASLEASIRYARERQTFGVPIGEHQLVKRMISHMVRKLDTS 310 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R ++ + E A+ A ++ + +A++ G GY +E Sbjct: 311 RLLVYRAGWMKNKGIRNTRETTLAKWHATVSSFEAAD-------DALQIHGAYGYADEYP 363 Query: 430 IARHYRESPANSILLGS 446 + R+ R + I G+ Sbjct: 364 VERYLRNARGAIIYEGT 380 >gi|89068383|ref|ZP_01155786.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus HTCC2516] gi|89046037|gb|EAR52096.1| acyl-CoA dehydrogenase family protein [Oceanicola granulosus HTCC2516] Length = 384 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 24/281 (8%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 +F + P + AI LTE G+D+A T + DG Y L G K W Sbjct: 99 LFGTDAQKARWLPETRAGRAIAAFALTEPASGSDVANSTMTARADGDG-YVLDGEKTWIS 157 Query: 236 SSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 + ++D + + A+ EG L ++ G+P +RL+ + L F Sbjct: 158 NGGIADVYTVFARTGEGPGARGLSAFVVAAGTPGLEIAERLETIA---PHPLARLRFD-- 212 Query: 295 FGFLLGDLNVSTGPVEDMKI-LIYLD-----SAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 G + + P K+ + LD A ++ R +L E++ RHV G Sbjct: 213 -GCRMPADALVGAPGAGFKVAMAVLDVFRSTVAAAALGFARRALDESLARVSTRHVQGAP 271 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKM 407 L D +++ +AD+ALDI AA L +R A + D R + EAA A++ A + Sbjct: 272 LADLQLVQGHLADMALDIDAAALLVYRAAWAKDSGAPRVTREAAMAKLFA-------TEQ 324 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A VI +A++ GG G + R YRE A I G+ + Sbjct: 325 AQRVIDQAVQLHGGDGVRAGGIVERLYREIRALRIYEGASD 365 >gi|319949102|ref|ZP_08023196.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4] gi|319437251|gb|EFV92277.1| acyl-CoA dehydrogenase FadE25 [Dietzia cinnamea P4] Length = 389 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 13/259 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E+ G+D A++ ++ + D + L+G K W + S + ++A + G + Sbjct: 130 LSEREAGSDAASMRTRAKADGDD-WILNGSKAWITNGGKSTWYTVMAVTDPDKGAGGISA 188 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + G + + K+G + + T EL F N + GD + L LD Sbjct: 189 FMVHADDEGFGVSKTEKKLGIKGSPTAELYFENV--RIPGDRIIGEPGTGFKTALQTLDH 246 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ V +A+ AI Y + R G + D + +AD+A+ + AA + + Sbjct: 247 TRPTIGAQAVGIAQGALDAAIAYTKERRQFGKAISDFQNTQFMLADMAMKVQAARLMVYT 306 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + + + E MA +K + +A V A++ GG+GY + + R R Sbjct: 307 AAANAERGSAPGGE--KLGFMAAASKTFASDVAMEVTTNAVQLFGGAGYTRDFPVERMMR 364 Query: 436 ESPANSILLGSG--NAMVL 452 ++ I G+ N MV+ Sbjct: 365 DAKITQIYEGTNQINRMVM 383 >gi|295839766|ref|ZP_06826699.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB74] gi|197698456|gb|EDY45389.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. SPB74] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 117/271 (43%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P + I LTE GT A IT+ + D Y LSG K ++ + D +++ A+ Sbjct: 110 PSVTGEIKIAFTLTEPGNGTG-ADITTSVVREGD-TYYLSGSKHLITFGVRCDYYLLAAR 167 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 VEG G LVPR + G+ + + +G L F T LG Sbjct: 168 VEGSTGHEGTVALLVPR-----NAPGVTVEDTSHTMGVTGTDHASLTFDRTPVPVDHRLG 222 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355 + G D+ + +L + +SV+ V LAE A+ YAR R G L + + Sbjct: 223 ----AEGEGLDVFLGGFLTPSRVSVAMSCVGLAERAQQLAVAYARDRVTFGKALTQRQAI 278 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A+ A DI AA L A F++ +E+A+ MA K M V +A Sbjct: 279 QFMLAENAADIEAAKQLVLHAARRFEQG---AEDASMQSSMA---KMHAVTMLTNVTDKA 332 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY + + I R YR++ A G+ Sbjct: 333 LQIHGGLGYWKSQKIERVYRDARAQRFEEGT 363 >gi|313885601|ref|ZP_07819351.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619331|gb|EFR30770.1| acyl-CoA dehydrogenase, C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 402 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 42/288 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 +APK+ S E+ GLTE G+DIA + ++ + ++G K Sbjct: 131 YAPKLASYEWHSC-------------FGLTEPLHGSDIAGGLATTAELQGDKWVINGEKK 177 Query: 233 WFLSSPMSDAFIMLAQ--VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 W + +D + A+ +G++ CF+VP G+P GL ++ KI R ++ Sbjct: 178 WIGGAATADVLPIFARDVADGQIKCFMVP----GGTP-GLTVDKIDGKISLRLIQNGHIK 232 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS--VSGMRV-SLAEAIHYARRRHVSGG 347 +N L + D+ ++Y A ++ +G+ +LA + Y + R G Sbjct: 233 MNNVQVDKTARLE-NINSFRDVAKILYTTRADVAHLATGLHAGALANTLKYVKEREQFGK 291 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +++ +A + + + ALS RLA E+ Y + + + K Sbjct: 292 KISQFQLVQEKLARMQANCVTSLALSHRLAQ-------LQEQGRYEEVQSSLAKMNNAYR 344 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPA----------NSILLG 445 +A E +GG+G I E +AR + ++ A NS++LG Sbjct: 345 LRETVALGRELLGGNGIIVEHDVARFFVDAEAAYSYEGTHEVNSLILG 392 >gi|239941416|ref|ZP_04693353.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239987880|ref|ZP_04708544.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291444861|ref|ZP_06584251.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291347808|gb|EFE74712.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 385 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 56/311 (18%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + ++ T K W PK + E L +TE G+D+A + + + Sbjct: 99 IKMLATDEQKKRWLPKFATGEE-------------MWALAMTEPGTGSDVAGMKTTAKLS 145 Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQ 273 DG Y L+G K F++ + +D I+ A+ + R G L D G Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPREDDRRFGISL---FAVDTKSEGYSVG 202 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAIMS---- 324 R +K+G + + T EL F D+ V PVED+ K YL + + S Sbjct: 203 RKLDKLGLKVSDTAELAFV--------DVKV---PVEDLMGEENKGFGYLGTNLASERWG 251 Query: 325 -----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + ++ A Y + R V G + K +A ++ AA A++ R + Sbjct: 252 IAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAQAVADRALEA 311 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + + EAA A++ +C ++A VI ++ GG G++ E IAR Y ++ Sbjct: 312 LDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRV 364 Query: 440 NSILLGSGNAM 450 N I G+ M Sbjct: 365 NRIYGGTSEVM 375 >gi|254462692|ref|ZP_05076108.1| acyl-CoA dehydrogenase family protein [Rhodobacterales bacterium HTCC2083] gi|206679281|gb|EDZ43768.1| acyl-CoA dehydrogenase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 40/292 (13%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F + P + AI LTE + G+D++ T + D Y ++G K Sbjct: 101 ALSLFGADAQKAEWLPKVRAGKAISAFALTEPQSGSDVSNSTMTAALVGDH-YVINGEKT 159 Query: 233 WFLSSPMSDAFIMLAQV---EGRVG--CFLVP---------RLLEDGSPNGLCYQRLKNK 278 W + ++D + + A+ EG G F+VP LE SP+ L K+ Sbjct: 160 WISNGGIADVYTVFARTGEGEGARGLSAFVVPADTPGLDVIERLETISPHPLATLSFKD- 218 Query: 279 IGNRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 R A+ + S + F +G L+V V A ++ R +L EA+ Sbjct: 219 --CRVPASALIGQSGSGFKIAMGVLDVFRSTV-----------AAAALGFARRALDEALA 265 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIM 396 RHV G L D +++ IAD+A+DI A+ L +R A + D R + EAA A Sbjct: 266 RVTSRHVQGAPLFDLQMVQGHIADMAVDIDASALLIYRAAWAKDSGAPRVTREAAMA--- 322 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + A VI +A++ GG G + + YRE A I G+ + Sbjct: 323 ----KLFSTDQAQKVIDKAVQLHGGDGVRTGQMVESLYREIRALRIYEGASD 370 >gi|23016676|ref|ZP_00056429.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 389 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 41/303 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G K Sbjct: 117 YLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGD-RYILNGTK 161 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + P +D ++ A+ + G + L + + G + +K+G R + T EL F Sbjct: 162 MWITNGPDADVIVVYAKTDVTAGPRGITAFLVEKTFKGFSVAQKLDKLGMRGSNTGELVF 221 Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 + N G + +NV ++ +++ L + + M + + Y R Sbjct: 222 TDCEVPEENVLGAVGKGVNVLMSGLDFERVV--LTGGPLGI--MAACMDVVVPYIHERVQ 277 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + +M+ +AD+ A A ++ +A + D ++ ++AA + W Sbjct: 278 FGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGETSRKDAAGVILYGAEKATW- 336 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + EA++ +GG+GYI E + R R++ I G+G + + +L G L Sbjct: 337 ------MALEAIQTLGGNGYINEYATGRLLRDAKLYEI--GAGTSEIRRML----IGREL 384 Query: 465 FEQ 467 FE+ Sbjct: 385 FEE 387 >gi|307944794|ref|ZP_07660132.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4] gi|307772008|gb|EFO31231.1| glutaryl-CoA dehydrogenase [Roseibium sp. TrichSKD4] Length = 405 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ K G Y L+G K W +SP++D F++ A+ E G + Sbjct: 147 FGLTEPDAGSDPAGMRTRAIKTDSG-YRLTGSKMWISNSPIADVFVVWAKSEAHDGA-IR 204 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ N LL +++ GP Sbjct: 205 GFVLEKGM-KGLSAPKVGGKLSLRASITGEIVMDNVEVGEDALLPNVSGLKGP------F 257 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 258 GCLNRARYGISWGVMGAAEDCWTRARQYGLEREQFGRPLAQTQLFQKKLADMQTEIALGL 317 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + R+ FD + E M + K C A + +A + GG+G EE + Sbjct: 318 QAALRVGQLFDAGQVAPE-------MISLIKRNNCGKALDIARQARDMHGGNGIQEEYHV 370 Query: 431 ARH 433 RH Sbjct: 371 MRH 373 >gi|302520578|ref|ZP_07272920.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|302429473|gb|EFL01289.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB78] Length = 608 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + +DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316 Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378 A+ YA+ R V G L + P ++R++ AL A + Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375 Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 S ++ E+AA ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435 Query: 435 RESPANSILLGS 446 R++ +++ G+ Sbjct: 436 RDAKIDTLYEGT 447 >gi|154331163|ref|XP_001562021.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059343|emb|CAM37045.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 416 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 17/249 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + ++ + +LA+ EG F+V Sbjct: 164 VTEPTGGSDVAGLKTTARKEGD-RWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-- 220 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319 D + G+ + +G R + T + F N + G M++ + Sbjct: 221 ---DANAPGVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTR 277 Query: 320 S--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 S AI +V R + EA YAR R G + + +A++A + A +++R Sbjct: 278 SSVAIAAVGLSRRATDEATGYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + A+ A++MA +A A A++ GG+GY + + YR+ Sbjct: 338 WDTDQGRRNTYYASCAKMMA-------ANLAEKCAANAVQIFGGNGYNTGYPVEKLYRDC 390 Query: 438 PANSILLGS 446 SI G+ Sbjct: 391 KIFSIYEGT 399 >gi|330504164|ref|YP_004381033.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328918450|gb|AEB59281.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 379 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 21/261 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR---- 252 + + +TE G+D+A + + D + L+G K F+S+ ++D I+ A+ + Sbjct: 122 LAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADVVIVAAKTDPANKHA 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 +G FLV R G P ++LK K+G S T EL F++ LLGD + Sbjct: 181 MGLFLVER----GMPGFERGKKLK-KLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYL 235 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M L +A +V+G +L I Y R R G + + +A++ I A Sbjct: 236 MNMLAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R ++ K E AA A++ + ++ V+ E ++ GG GY+ E Sbjct: 296 QVFTDRCVMDHNQKKLTPEVAAEAKL-------FTTELLGKVVDEGVQLHGGWGYMWEYP 348 Query: 430 IARHYRESPANSILLGSGNAM 450 I + Y + I G+ M Sbjct: 349 ICKMYANARIQRIFAGTSEIM 369 >gi|291297090|ref|YP_003508488.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus ruber DSM 1279] gi|290472049|gb|ADD29468.1| acyl-CoA dehydrogenase domain protein [Meiothermus ruber DSM 1279] Length = 592 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 41/291 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E G+ + + ++ + +DG Y L+G K ++S + ++LA++ G Sbjct: 163 LSEPHAGSSLTDLLTRAEPQADGTYRLNGSKMWISGGDHEIAENIVHLVLAKIPGGPPGV 222 Query: 253 --VGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLG----D 301 + F+VP+ L EDG NG+ L +K+G R L + G L+G Sbjct: 223 KGISLFIVPKYLVHEDGRLGPRNGVRVAGLNHKMGYRGIPNCLLSLEDAVGELVGAPHQG 282 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSL--AEAIHYARRRH----VSGGI-LIDQP- 353 L+ + + +I + + + ++ +G +L A+ RR H S + +I P Sbjct: 283 LSYMFTMMNEARIGVGMGAMALAYTGYLHALEYAQTRTQGRRLHDKNPASPAVPIIQHPD 342 Query: 354 -----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWC 404 +M++A A+ L + A RL + A + E A AR ++ P+ K W Sbjct: 343 VRRMLIMQKAYAEGCLHLCLYAA---RLVDEERTAPT-PEAAEQARLLLEVLTPVVKAWS 398 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 ++ A++ GG GY + ++ + YR++ N+I G+ LD+L Sbjct: 399 SELGMRANELAIQVHGGYGYTRDYNVEQFYRDNRLNAIHEGTNGIQALDLL 449 >gi|126740626|ref|ZP_01756313.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] gi|126718427|gb|EBA15142.1| Acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] Length = 385 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 33/288 (11%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W PK+ + E + + +TE G+D+ I + ++ Y L+G Sbjct: 112 KRWLPKMATGE-------------MVCAIAMTEPGTGSDLQNIKTTA-RLEGNEYVLNGS 157 Query: 232 KWFLSSPMSDAFIMLAQ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 K F+++ I++ +G G L+ ++E G R K+G +S T Sbjct: 158 KTFITNGQQAGLIIVVAKTDPSQGAKGVSLM--MVETAEAEGFARGRNLEKLGLKSQDTS 215 Query: 288 ELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRR 342 EL F N LLG + G + MK L L A+ + M +L E + Y R Sbjct: 216 ELFFDNVRLPPENLLGGVE-GQGFYQLMKSLPQERLVVALGGAAAMNKALEETVAYTSER 274 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G L++ + +A++ A A F D+ ++ A + K+ Sbjct: 275 RAFGKPLLEMQNTRFKLAEV--KTIAHIARVF-----LDDCVAKHLRGELDATTASMAKW 327 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 W +M I E ++ GG GY+ E IA Y ++ I GS M Sbjct: 328 WVTQMQCETIDECLQLFGGYGYMSEYPIANMYADARVQKIYGGSNEIM 375 >gi|294650323|ref|ZP_06727690.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292823736|gb|EFF82572.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 431 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 26/226 (11%) Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--- 278 +G + ++G K + +D FI+ A+ G+ F+V C + + K Sbjct: 221 NGKFYITGEKTLVVLGDTADVFIVSAEWNGKPDIFVVQ-----------CDETIAIKANP 269 Query: 279 -IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 +G ++ T L+F+ T LGD + D+ L++ AI + ++ A I Sbjct: 270 AMGLKAAETATLQFNQTPALRLGDTDFDYTAFVDLGNLMWCAMAIGTCEAIK---AYCIK 326 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G + + + IAD+A++I A L A+ + + EA AR++ Sbjct: 327 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLVLNAASLAEAGQPFHREAYLARLL- 385 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 C + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 386 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 425 >gi|315499040|ref|YP_004087844.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] gi|315417052|gb|ADU13693.1| acyl-CoA dehydrogenase domain-containing protein [Asticcacaulis excentricus CB 48] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 28/276 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFL 257 L ++E G+D+ ++ + +K + Y L+G K W + P +D ++ A+ EG G Sbjct: 129 LAMSEPGAGSDVMSMKLRAEKRGE-HYVLNGSKMWITNGPDADVLVVYARTAEGSKG--- 184 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V L + G + +K+G R + T EL F++ + + NV + +L+ Sbjct: 185 VTAFLIEKDFAGFSVAQKLDKLGMRGSHTGELVFADC---EVPEENVLSTEGRGAAVLMS 241 Query: 318 -LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + +SG MR L I Y R G + +M+ IAD+ A A Sbjct: 242 GLDYERVVLSGGPLGIMRACLNAVIPYVHERQQFGAPIGTFQLMQGKIADMYATWGACRA 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ ++AA + A W + EA++C+GG+GY+ E Sbjct: 302 YVYAVAAACDRGETTRKDAAACILYAAEKATW-------MAGEAIQCLGGNGYVNEYPTG 354 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R +R++ I G+G + + +L G LFE+ Sbjct: 355 RLWRDAKLYEI--GAGTSEIRRML----IGRELFEE 384 >gi|121609456|ref|YP_997263.1| isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2] gi|121554096|gb|ABM58245.1| Isovaleryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2] Length = 388 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 40/256 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A+ ++ + +D Y +SG K F++ +P++ F +LA+ + G Sbjct: 122 FALTEPEAGSDACALRTRALRDADH-YLISGSKCFITNAPIAQLFTVLARTDPAHPGAGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + FLV R GL + K+G + L F N L+G G Sbjct: 181 ISAFLVER-----DTPGLVVGKPYQKMGQAGSPVAPLYFDNCRVPAANLIGGQE-GRGFK 234 Query: 310 EDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIA 360 MK+L I+L +A+ MR+ L EA+ H +G QPV ++ +A Sbjct: 235 TAMKVLNKQRIHL-AALCIGPAMRM-LQEAVQ-----HTAGRRQFGQPVGSFQLVQAMVA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D +I AA AL A D + + +A+ + KY+ +M V ++ +G Sbjct: 288 DCQTEIHAARALVLETARQRDLGQDVAMQAS-------MCKYFASEMCARVADRCVQMLG 340 Query: 421 GSGYIEERSIARHYRE 436 G G+I + + R YR+ Sbjct: 341 GYGFIADNPVERFYRD 356 >gi|152975810|ref|YP_001375327.1| acyl-CoA dehydrogenase type 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024562|gb|ABS22332.1| Acyl-CoA dehydrogenase type 2 domain [Bacillus cytotoxicus NVH 391-98] Length = 384 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 33/276 (11%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 ++ W P +F+ + K + + + RGG +G+K + ++G Sbjct: 101 NQSWKPDMFAWFCEEVKKGALFNRAATERKTGSPTRGGRPETLAVKKGEK-----WIING 155 Query: 231 HKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 K F + +PM D FI+ A +EGR +G F+VPR + G+ + + + R A+ Sbjct: 156 RKTFTTMAPMLDYFIISASIEGREEIGEFVVPR-----AQKGVSIEETWDSVAMRGTASH 210 Query: 288 EL-----EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHY 338 +L E S+ + D+ S + + L+++ + + ++ + AE+ Sbjct: 211 DLVLRNVEISDKY---FTDIKGSQSKPKGVGWLLHIPACYLGIAQAARNYALRFAESYQP 267 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +H + P ++R + ++ L++ A +++A +DE + ++ A + A Sbjct: 268 NSLKHPISSL----PNIRRLVGELELELMQARMFLYQIAKKYDEVDDK--QSLQAELAA- 320 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 KY A +V+ +AM +G E+ + R+Y Sbjct: 321 -AKYIATNAAISVVDKAMRIVGAKSLSEKNPLHRYY 355 >gi|313221180|emb|CBY32004.1| unnamed protein product [Oikopleura dioica] Length = 421 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 94/415 (22%), Positives = 167/415 (40%), Gaps = 47/415 (11%) Query: 66 LSCTAQELARMANYNTPQLHAYGPGGERWD------KVEFHPAWHALLRRSIHDGLHCSI 119 LS +AQ AR+ N+ + +L G G +D + + W + + Sbjct: 12 LSASAQLGARLHNWQSEKLTDIGTG-VNYDSDMDIFREQCRKFWSGISAERVEK------ 64 Query: 120 WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL----MTTPRVHKDW- 174 WD++ P A L + E G + +P SMVA P+ + Sbjct: 65 WDKTHMPDAEIWREAGEAGLLCIDTPAEYGGIGAP--FEYSMVACEEQAYAGPKFYGPGF 122 Query: 175 -------APKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDG 224 AP I F E P T I +G+TE GG+D+ A+ + + D Sbjct: 123 GLHSGIVAPYITSFGTEEQKHKYIPSMTTGETISCIGMTEPSGGSDLQAMKTNAVRDGDD 182 Query: 225 IYCLSGHKWFLSSPMSDAFIMLA---QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 + L+G K F+S+ ++A + EGR + L++ G + KIG Sbjct: 183 -WILNGSKTFISNGTLANLGLIAARTKKEGRAAHAISLFLVDTREHKGFSKGKNLRKIGQ 241 Query: 282 RSNATVELEFSNT---FGFLLGD---LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA 335 S T EL F++ LLG+ LN + + + A+ +++ + + + Sbjct: 242 HSYDTAELFFNDVRLPASALLGEEEGLNKGFYMMMNELPRERVGCALEALARLENAFEQT 301 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 Y + R GG L D+ V+K ++A+I +I + ++ + + +E A+ ++ Sbjct: 302 RQYTQERKAFGGPLSDKQVIKHSMAEIKTEIVSVRLMADECVRLYSRGELDNETASMFKL 361 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A KY C + + ++ GG GY+ E IA+ Y + +I G+ M Sbjct: 362 YA-TEKYVSC------VNKLLQHWGGWGYMWEYDIAKEYAGARVFTIYAGTSEIM 409 >gi|254819967|ref|ZP_05224968.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 380 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 45/300 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223 +TT + W PK S EY IG + ++E G+D+A I + + D Sbjct: 102 LTTEEQKERWLPKFVSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147 Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+S+ + ++ A G L+ ++EDG G R +KI Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-EGFTRGRKLDKI 203 Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330 G S T EL F + L+G+LN VS P E + + Y ++ R Sbjct: 204 GQYSADTAELFFEDVKVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L YA R G + V + +A++ + AA + S ++ ++A Sbjct: 258 ALDLTKAYALERTAFGQPIGKFQVNRHFLAEMQTKLDAAQTYLDQCVLSVNDGTLSDQDA 317 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ +I ++ GG GYI E +AR +R+S + G+ M Sbjct: 318 AG-------LKWWTSEVQWEIIDRCLQLHGGYGYINEYEVARLWRDSRVQRLYAGTTEIM 370 >gi|163857879|ref|YP_001632177.1| glutaryl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163261607|emb|CAP43909.1| glutaryl-CoA dehydrogenase [Bordetella petrii] Length = 397 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 34/270 (12%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D + ++ G Y LSG+K W + Sbjct: 115 FGSEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPNGMETRAVLTGSG-YKLSGNKMWITN 173 Query: 237 SPMSDAFIMLAQV-----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL-- 289 SP++D F++ A+ +G++ F++ + ++ GL + K+G R++ T E+ Sbjct: 174 SPIADVFVVWAKCVGGDYDGKIRGFILEKGMK-----GLSAPAIHGKVGLRASITGEIVM 228 Query: 290 -EFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RH 343 E + +L D++ GP L+SA ++ + AEA H AR+ R Sbjct: 229 DEVEVSAEQMLPDVSGLRGP------FTCLNSARYGIAWGALGAAEACWHTARQYTLDRK 282 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G L ++++ +AD+ +I RL DE + E + I K Sbjct: 283 QFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVE-------ITSIMKRN 335 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433 C A + A + +GG+G +E +ARH Sbjct: 336 SCGKALDIARLARDMLGGNGISDEFGVARH 365 >gi|182625512|ref|ZP_02953283.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721] gi|177909200|gb|EDT71665.1| butyryl-CoA dehydrogenase [Clostridium perfringens D str. JGS1721] Length = 379 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 24/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K GLTE GTD A Q + +G Y L+G K F+++ ++D FI+ A Sbjct: 113 PLAKGEKLGAFGLTEPGAGTDAAG--QQTTAVLEGDNYILNGSKIFITNGGVADTFIIFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + G + + + + G +L+ K+G R+++T EL N L+G Sbjct: 171 MTDKSQGTRGISAFIVEKNFPGFSIGKLEEKMGIRASSTTELIMENCVVPKENLIGREGK 230 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 G MK L D + ++ + +AE A+ Y + R L ++ + Sbjct: 231 GFGIA--MKTL---DGGRIGIAAQALGIAEGALEEAVAYMKERKQFCRSLSAFQGLQWMV 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ I AA L ++ A +E K S +AA A++ A +A V +A++ Sbjct: 286 AEMDTKIEAARFLVYKAACLKEEGKPYSIDAARAKLFA-------ADVAMEVTTKAVQLF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E + R R++ I G+ Sbjct: 339 GGYGYTKEYPVERMMRDAKITEIYEGT 365 >gi|171317157|ref|ZP_02906358.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] gi|171097650|gb|EDT42482.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MEX-5] Length = 377 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKLGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|325479667|gb|EGC82759.1| butyryl-CoA dehydrogenase [Anaerococcus prevotii ACS-065-V-Col13] Length = 378 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 34/276 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE GTD + + + D Y L+G K F+++ +D +++ A + G + Sbjct: 122 FALTEPDAGTDASGQKTVAKLDGDN-YILNGSKIFITNAGYADTYVVFAMTDKEQGTRGI 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----K 313 + + G + ++K+G + ++T+EL F D V P E+M K Sbjct: 181 SAFIVEKGMEGFDFGTTEDKMGIKGSSTMELIFR--------DCKV---PKENMLGEEGK 229 Query: 314 ILIY----LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 Y LD + ++ + +AE +I Y + R+ G L + +A++A+ Sbjct: 230 GFKYAMQTLDGGRIGIAAQALGIAEGALEKSIKYVKERNQFGRPLAKFQNSQFKLAEMAI 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI +A L ++ A D +S + + A K ++A V +A++ GG GY Sbjct: 290 DIESARHLVYKAACLKDAGESYT-------VAAAEAKLKAARVAMDVTTKAVQLFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I+E + R R++ I G+ M++ V L K Sbjct: 343 IKEYEVERMMRDAKITEIYEGTSEVMLMVVSGALLK 378 >gi|297194257|ref|ZP_06911655.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197720549|gb|EDY64457.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 50/317 (15%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + L T + W P++ S E + GLTE GG+D + + Sbjct: 100 IHLFGTEEQKRQWLPRLCSGE-------------LLGAFGLTEPDGGSDAGGTRTTAVRD 146 Query: 222 SDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCY 272 D + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 147 GD-EWVINGSKCFITNSGTDITGLVTVTAVTGRKEDGRPEISAIIVP----SGTP-GFTV 200 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 +K+G ++ T EL F++ LLG G + ++IL D +++S + Sbjct: 201 AAPYSKVGWNASDTRELSFADVRVPVANLLG--QEGRGYAQFLRIL---DEGRIAISALA 255 Query: 330 VSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 LA E++ YAR RH G + ++ IAD+ + A + +A Sbjct: 256 TGLAQGCVDESVKYARERHAFGRPIGSNQAIQFKIADMEMKAHMARV-------GWRDAA 308 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 SR + A + K + +A EA + GG G++ E +AR +R+S + + Sbjct: 309 SRLVHGEPFKKEAAVAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILEI 366 Query: 445 GSGNAMVLDVLNLLEKG 461 G G + V +L E G Sbjct: 367 GEGTSEVQRMLIARELG 383 >gi|167616827|ref|ZP_02385458.1| non-ribosomal peptide synthetase [Burkholderia thailandensis Bt4] Length = 1293 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AITS Q++ + +SG K W SS + + A+ G +V Sbjct: 761 LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 818 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R T+ L+ + + LG + Sbjct: 819 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 877 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ I D+ I +AL +L Sbjct: 878 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 936 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD ++ E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 937 AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 990 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 991 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1023 >gi|11498741|ref|NP_069970.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304] gi|2649449|gb|AAB90105.1| acyl-CoA dehydrogenase (acd-8) [Archaeoglobus fulgidus DSM 4304] Length = 387 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 36/274 (13%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA--- 247 + + V +G+ TE G+D A I ++ K D + ++G K F+S+ F+++ Sbjct: 116 LARGDVIMGMANTEPDAGSDAANIKTRAVKEGDE-WVINGTKQFISNGSIADFLLVTART 174 Query: 248 -QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 +++ + + + + + G ++K K+G R+ T E+ FSN Sbjct: 175 REMDPKAKHRGISYFIVETNREGYKANKIKGKMGIRATDTAEISFSNV-----------R 223 Query: 307 GPVEDM---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQ 352 P E++ ++ + D + + V V +A+ I Y ++R L Sbjct: 224 VPAENLVGEEGKGFYYMMEFFDMSRVWVGAQAVGIAKGALKLVIDYVKQRKAFNVPLATF 283 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ IA++A I AA L +R A + E+ ++ + K++ ++A Sbjct: 284 QYIQFKIAELATKIEAARTLVYRAA------AVQVEQGKPDNTLSSMAKWYAGEVAVETA 337 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GYI+E +I + YR++ I G+ Sbjct: 338 NWALQFHGGYGYIDEYAINQFYRDAKITEIYEGA 371 >gi|307182564|gb|EFN69757.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Camponotus floridanus] Length = 404 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 20/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A G + Sbjct: 147 LTEPGAGSDAFSLKTVAKK--DGSDYIINGTKMWISNSDIAGVFLVFANANPSAGYRGIT 204 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318 D GL + ++K+G +++ T + F N + + N+ + K +L Sbjct: 205 TFFVDRDTPGLSVAKPEDKLGIKASGTCMIHFDNV---RVPEKNILGEFGQGYKYAAGFL 261 Query: 319 DSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + + +A+ I Y R G + M+ IA +A ++ A L Sbjct: 262 NEGRVGIGAQMIGIAQGCLDATIPYTLERKQFGHDVFSFQSMQHQIAQVATELECARLLV 321 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D K +EAA A+++A T A V A+ ++ +GG G+ E ++ Sbjct: 322 YNAARLVDAKKDVMKEAAMAKLVASET-------ALRVTAKCIDFMGGVGFTTEFPQEKY 374 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + + K Sbjct: 375 FRDSKIGTIYEGTSNMQLSTIAKCIRK 401 >gi|320009824|gb|ADW04674.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 608 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/312 (22%), Positives = 146/312 (46%), Gaps = 51/312 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAEIAVEKQWGSTMVLTEPDAGSDVGAGRTKAVEQEDGSWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGAGPGTKGLSLFLVPKFHFDWTTGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIAALSTGYLN 316 Query: 335 AIHYARRRHVSGGIL---IDQ----------PVMKRAIADIALDIAAATALSFRLANSFD 381 A+ YA+ R V G L +D+ P ++R++ +L A+ D Sbjct: 317 ALEYAKER-VQGTDLSQFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQD 375 Query: 382 --EAKSRSEEAAYA-----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + K + E A A ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 376 AIQVKEAAGEDAKALNGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435 Query: 435 RESPANSILLGS 446 R++ +++ G+ Sbjct: 436 RDAKIDTLYEGT 447 >gi|94309053|ref|YP_582263.1| acyl-CoA dehydrogenase-like protein [Cupriavidus metallidurans CH34] gi|93352905|gb|ABF06994.1| acyl-CoA dehydrogenase, short-chain specific [Cupriavidus metallidurans CH34] Length = 376 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ + + LTE G+D +A+ + + D Y L+G K F++S +D I++A Sbjct: 111 PLAQGDMLGAFCLTEPHVGSDASALRTTATRDGDH-YVLNGVKQFITSGKHADVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G FLVP S G RL+ K+G S+ T ++ F N +LG Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEEKLGQHSSDTAQIVFENCRIPAANMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A S+ R + A+ YA+ R G L ++ Sbjct: 225 EEGAGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I A + + A+ D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLADMATQIDVARQMVWHAASLKDAGRPCLKEAAMAKLFA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVTDFPVERIYRDVRVCQIYEGTSD 365 >gi|315446576|ref|YP_004079455.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315264879|gb|ADU01621.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 464 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 74/332 (22%), Positives = 142/332 (42%), Gaps = 58/332 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P WAP+ F D ++ ++AI +E GG+D+ + + + Sbjct: 96 SAIGQAASPEQMLQWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTTAR 145 Query: 220 KIS---DGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGL 270 + D + + GHK W + +++ ++ A V+ +G F+VP G+P GL Sbjct: 146 RAGPEPDADWIIDGHKMWIGNGGIANVHVVNAVVDQELGHKGQALFVVP----GGTP-GL 200 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVST 306 R +K+G R++ T EL+F++ LLG + + Sbjct: 201 DMVRKLDKLGCRASHTAELKFNSVRVPADHLLGGQEKLDHKLARAREAVEGGRHSGSATL 260 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G E + ++ A ++ R +L YA RR G +ID + +AD+A + Sbjct: 261 GTFEQTRPMV----AAQALGIARAALEYVTEYANRREAFGAPIIDNQGISFPLADLATGL 316 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L++R S+ A + R ++K ++A A++ +GG GY++ Sbjct: 317 DAARLLTWR--ASWMAATG----VPFERGEGSMSKLAASELAVRATERAIQTMGGYGYVK 370 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + + + YR++ +I G+ + + N L Sbjct: 371 DHPVEKWYRDAKLYTIFEGTSEIQRIVISNAL 402 >gi|213157970|ref|YP_002320768.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213057130|gb|ACJ42032.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] Length = 387 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ L+ K+G ++ T L F LLG N + + Sbjct: 185 GISMLLIDAHSEGITKTPLR-KMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 304 EETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377 >gi|138896595|ref|YP_001127048.1| acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|196249296|ref|ZP_03147994.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] gi|134268108|gb|ABO68303.1| Acyl-CoA dehydrogenase [Geobacillus thermodenitrificans NG80-2] gi|196211053|gb|EDY05814.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. G11MC16] Length = 594 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 82/356 (23%), Positives = 145/356 (40%), Gaps = 61/356 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W +S +D F++ A+V+G+ F+V Sbjct: 150 LTEPGSGSDALGAKTTAKLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGQHFTAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311 R G+ + K+G +S++T V + N G + G V Sbjct: 210 ERDFP-----GVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 IL + +V G + +L + YA +R + + + A +A + AA Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISKFTLTQEKFATMAARLYAA 318 Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + +R FDE K ++ A I + K++ ++ ++ E ++ Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEIAKSIAEYAIECSLNKFFSTEVLDYIVDEGVQ 378 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465 GG G+++E I R YR+S N I G+ L V L L +K L Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAMKGELPLFQKAQQLQ 438 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAAALYRAG 521 E+L ++ GS + +++K L R +KIAL + A+ + G Sbjct: 439 EELMMMTAEEPGS-------------GVLEQEKYLVRN-AKKIALMVAGLAVQKYG 480 >gi|145245473|ref|XP_001395004.1| glutaryl-CoA dehydrogenase [Aspergillus niger CBS 513.88] gi|134079704|emb|CAK97130.1| unnamed protein product [Aspergillus niger] Length = 428 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 19/252 (7%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQK--ISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 + K +A GLTE G+D ++ + ++ G Y LSG K W +SP+SD I+ A Sbjct: 155 LAKGKLAGCFGLTEPNHGSDPGSMETVAREHPTKKGYYLLSGTKTWITNSPISDIMIVWA 214 Query: 248 --QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL 302 Q G++ F+V R P L +KNK R++ T ++ + + ++ Sbjct: 215 KLQTTGKIRGFVVER--SQCPPGTLETPAIKNKTALRASITGMIQMDDCPVPAENMFPEV 272 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361 GP + L A ++ + L+ A YA R+ G L ++++ +AD Sbjct: 273 QGLAGPFTCLNS-ARLGIAFGAMGALEDCLSRARTYALERKQFKGNPLAKYQLIQKKLAD 331 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A D A T + ++A D K E M + K C A A E GG Sbjct: 332 AATDAAYGTLAATQVARLKDAGKCTPE-------MISMVKRQNCDRALANSRILQEVFGG 384 Query: 422 SGYIEERSIARH 433 + +E IARH Sbjct: 385 NATSDEYHIARH 396 >gi|73538578|ref|YP_298945.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72121915|gb|AAZ64101.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 382 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 43/298 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T ++W PK+ S E + + ++E G+D+ +I ++ + D Y Sbjct: 106 TEAQKQNWLPKMASGE-------------IVAAIAMSEPGAGSDLKSIKARAVRDGDQ-Y 151 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVE---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 L+G K F+++ ++D +++ + + G G +V ++E + G R+ KIG + Sbjct: 152 VLNGSKTFITNGFLADLILVVCKTDPDKGAKGVSIV--VVETENLPGFRRGRILEKIGQK 209 Query: 283 SNATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSL 332 T EL F + L G P E M I A+ ++S M ++ Sbjct: 210 GQDTAELFFDDVRVPCTNLLGTEEGKGFYQLMQQLPQERMII------ALGALSAMERAV 263 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 Y R R V G L+D + +A+ A A D+ ++ Sbjct: 264 ELTTDYVRERKVFGATLLDMQNTRFKLAECKTKAVIAGAF-------VDDCMAKVLRDEL 316 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + K+W + + +I E ++ GG GY+ E IAR Y + I GS M Sbjct: 317 DPETAAMAKWWGTQTSCEIIDECLQLHGGYGYMMEYPIARMYVNARVGKIYGGSNEIM 374 >gi|170058853|ref|XP_001865105.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167877781|gb|EDS41164.1| isovaleryl-CoA dehydrogenase, mitochondrial [Culex quinquefasciatus] Length = 423 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256 L ++E G+D+ ++ ++ K D Y L+G K W + P +D +I+ A+ + + Sbjct: 163 LAMSEPGSGSDVVSMKTRADKKGD-YYVLNGSKFWITNGPDADTYIIYAKTDLSAKPQHG 221 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E +P G +K+G R + T EL F + +LG LN G M Sbjct: 222 ITAFIVERDTP-GFSQGPKLDKLGIRGSGTCELIFEDAKVPAKNILGQLN--KGVYVLMS 278 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L Y L A V M+ + A YA R + + +++ +AD+ + A A Sbjct: 279 GLDYERLVLAAGPVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNACRA 338 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A S D K+ ++ A + +C + A V EA++ +GG+GYI + Sbjct: 339 YLYSVARSCDLGKANPKDCAGVIL-------YCAEKATQVALEAIQILGGNGYINDYPTG 391 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 392 RIMRDAKLYEIGAGT 406 >gi|163734530|ref|ZP_02141969.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149] gi|161392023|gb|EDQ16353.1| glutaryl-CoA dehydrogenase [Roseobacter litoralis Och 149] Length = 414 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K G Y L+G K W +SP++D F++ A+ E G++ Sbjct: 156 FGLTEPDAGSDPAGMKTRAEKTPTG-YKLTGSKMWISNSPIADVFVIWAKSEAHGGKIRG 214 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F +LE G GL ++ NK+ R++ T E+ LL ++ GP Sbjct: 215 F----VLEKGM-TGLSAPKVGNKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGP---- 265 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y RH G L + ++ +AD+ +IA Sbjct: 266 --FGCLNRARYGISWGVMGAAEFCWHAARQYGLDRHQFGKPLAGTQLFQKKLADMQTEIA 323 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S ++ D A++ E M I K C A V + + GG+G E Sbjct: 324 LGLQGSLQVGRLMDSAQAAPE-------MISIMKRNNCGKALDVARMSRDMHGGNGISGE 376 Query: 428 RSIARH 433 + RH Sbjct: 377 FQVIRH 382 >gi|318059222|ref|ZP_07977945.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG] gi|318079782|ref|ZP_07987114.1| acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF] Length = 608 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + +DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316 Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378 A+ YA+ R V G L + P ++R++ AL A + Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375 Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 S ++ E+AA ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435 Query: 435 RESPANSILLGS 446 R++ +++ G+ Sbjct: 436 RDAKIDTLYEGT 447 >gi|257140755|ref|ZP_05589017.1| AMP-binding domain-containing protein [Burkholderia thailandensis E264] Length = 1299 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AITS Q++ + +SG K W SS + + A+ G +V Sbjct: 767 LTEPAAGSNVRAITSVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 824 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R T+ L+ + + LG + Sbjct: 825 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 883 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ I D+ I +AL +L Sbjct: 884 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 942 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD ++ E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 943 AADFDAGRAAPEDGL---LIAKILGSECLSQTS---DELMQILGGRGYIETNVAPQIFRD 996 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 997 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1029 >gi|169629167|ref|YP_001702816.1| acyl CoA dehydrogenase [Mycobacterium abscessus ATCC 19977] gi|169241134|emb|CAM62162.1| Probable acyl CoA dehydrogenase [Mycobacterium abscessus] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 42/297 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + W PK+ S E IG + +TE G+D+ ++ ++ + DG Sbjct: 106 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 149 Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y ++G K F+++ +D I++A+ + G + ++ + G ++ +KIG R Sbjct: 150 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 209 Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338 T EL F LLG G ++ M L L A+ +V+ M ++L + + Y Sbjct: 210 QDTSELFFDEVRVPRSHLLGQAE-GQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 268 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393 R R G + K +A+ A + A + LA D Sbjct: 269 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQT--------- 319 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W + A V+ + M+ GG GY+ E I+R + + I G+ M Sbjct: 320 ---VAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373 >gi|116624389|ref|YP_826545.1| butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116227551|gb|ABJ86260.1| Butyryl-CoA dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 391 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 18/276 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D A+ ++ + D + L+G K W ++ + F++ A Sbjct: 124 PLLAEKMVASYALSEAGSGSDAFAMATRAEDKGDH-FLLTGRKLWITNAAEAGFFLLFAN 182 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 G V L + G + ++KIG R+++T EL N + NV Sbjct: 183 ANPEAGYKGVTAFLIERDFPGFAVGKKEDKIGLRASSTCELILDNC---RVPRENVMGEV 239 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI I L+ +++ + LA A+ YAR R G + + ++ +A + Sbjct: 240 GKGYKIAIETLNEGRIAIGAQMIGLARGALDHAVTYARERKQFGKPIGEFQGVQFDLAKM 299 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A+++ AA L + A D EAA A KY+ ++A V ++++E GG Sbjct: 300 AVEVEAARLLVYNAARLRDAGLPFLAEAAMA-------KYYSSEIAERVASKSIEVHGGV 352 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 G ++ + + YR++ I G+ N ++ + L Sbjct: 353 GITKDYPVEKLYRDAKIGRIYEGTSNIQLMTIAKKL 388 >gi|54027425|ref|YP_121667.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54018933|dbj|BAD60303.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 608 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 65/309 (21%) Query: 193 KTSVAIGLG----LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF----- 243 K +V G G LTE G+D+ A ++ K DG + + G K F++S SD Sbjct: 151 KIAVEQGWGATMVLTEPDAGSDVGAGRTKAIKQEDGSWHIEGVKRFITSADSDDLFPNIM 210 Query: 244 -IMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290 ++LA+ EG + F VP+ D G NG+ +++K+G + +AT E+ Sbjct: 211 HLVLARPEGAGPGTKGLSLFFVPKFHFDPETGELGERNGVFVTNVEHKMGLKVSATCEVT 270 Query: 291 FSN----TFGFLLGDLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 F G+L+G+++ +E ++++ +++ + A+ YA+ R Sbjct: 271 FGGHGVPAKGWLVGEVHNGIAQMFEVIEHARMMV----GTKAIATLSTGYLNALDYAKNR 326 Query: 343 HVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 V G L P ++R++A + A A R + A + Sbjct: 327 -VQGADLTQMTDKTAPRVTITHHPDVRRSLA-----MQKAYAEGLRAVYLYTAAHQDVDV 380 Query: 390 AAY---------ARI---MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 AA AR+ + PI K + A + E+++ GGSG++++ I ++ R++ Sbjct: 381 AAQVSGADADLAARVNDLLLPIVKGVGSERAYQYLTESLQTFGGSGFLQDYPIEQYIRDA 440 Query: 438 PANSILLGS 446 +S+ G+ Sbjct: 441 KIDSLYEGT 449 >gi|332526806|ref|ZP_08402907.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus JA2] gi|332111208|gb|EGJ11240.1| acyl-CoA dehydrogenase-like protein [Rubrivivax benzoatilyticus JA2] Length = 383 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 41/270 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LG++E GG+D+AA+ + + G Y ++G K W + +D +LA Sbjct: 123 LGVSEPGGGSDVAAVKTTA-RAEGGDYVINGTKMWITNGLKADWCCLLANTS-------- 173 Query: 259 PRLLEDGSPN-------------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 DG P+ G+ Q+++ KIG S+ T +L F N +L Sbjct: 174 -----DGPPHRNKSLIVVPMDAPGITRQKIR-KIGMHSSDTAQLFFDNVR-VPRRNLIGQ 226 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE----AIHYARRRHVSGGILIDQPVMKRAIAD 361 G ++L + + + + SL I Y R+R G ++D V+ +A+ Sbjct: 227 EGMGFTFQMLQFQEERLWGAASSLKSLDRLIDLTIDYTRQRQAFGKPILDNQVVHYRLAE 286 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + ++ A AL++R + + + A+ A++ C +++ V ++ GG Sbjct: 287 LRTEVEALRALTYRAVELYVAGQDVTRLASMAKLK-------CGRLSREVTDSCLQYWGG 339 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMV 451 GY E I++ +R+S SI G+ M+ Sbjct: 340 MGYTPENPISQAWRDSRLVSIGGGADEVML 369 >gi|312138525|ref|YP_004005861.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325676189|ref|ZP_08155869.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311887864|emb|CBH47176.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325552973|gb|EGD22655.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 18/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFL 257 +G+TE G+D+A + + + DG + LSG K F+++ + D ++ A+ + Sbjct: 125 IGMTEPSAGSDLANLKTSA--VRDGSDWILSGSKTFITNGYTADVVVVAARTDPTQRSKG 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + L D S G R +K+G T EL F +LG+ TG V M+ Sbjct: 183 ISLFLVDTSLPGFERGRKLDKVGQPEADTAELFFDEIRLPADAMLGE--PGTGFVSMMER 240 Query: 315 LIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L + +A+ +V+ + L E I YA+ R G + K +A++ I A A Sbjct: 241 LPQERIGAAVTNVAHAKQILLETIEYAKERKAFGNSIGSFQHNKFLLAELVTKIEVAQAY 300 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 D A + ++ + + A K+W ++ V+ ++ GG G++ E +AR Sbjct: 301 -------IDAAVAEHSDSGLSAVDAAKAKWWSAQVQNEVLDHCVQLHGGYGFMREYRVAR 353 Query: 433 HYRESPANSILLGSGNAM 450 + ++ I GS M Sbjct: 354 AWMDARVTKIWAGSNEIM 371 >gi|284993184|ref|YP_003411739.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284066430|gb|ADB77368.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus DSM 43160] Length = 614 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 85/362 (23%), Positives = 167/362 (46%), Gaps = 72/362 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + L+G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTRAVRQDDGSWHLTGVKRFITSAEHDLSDNIVHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300 + F+VP+ D G NG+ ++ K+G + + T EL F + G+L+G Sbjct: 224 KGLSLFVVPKFHVDLLTGALGERNGVYVTNVERKMGLKVSTTCELTFGDGPVPAKGWLVG 283 Query: 301 DLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI----DQ 352 +++ +E ++ + + +G +V A+ YA+ R + G L D Sbjct: 284 EVHDGIAQMFEVIEHARMFVGAKAIATLSAGYQV----ALDYAKNR-IQGADLTATGKDA 338 Query: 353 P--------------VMKRAIADIALDIAAATALSFRLANSFDEA--KSRSEEAAYA--- 393 P +++++ A+ + TA +FR + EA + SEEA A Sbjct: 339 PRVPITRHPDVRRSLMLQKSYAEGMRALYLYTA-TFRDQVTEAEAAGTADSEEARLAARV 397 Query: 394 -RIMAPITKYWCCKMAPAVI-AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ P+ K + + A ++ AE+++ +GGSGY+++ I ++ R+S +++ G+ A+ Sbjct: 398 NDLLLPLVKGFGSERATQLLTAESLQTLGGSGYLQDYPIEQYIRDSKIDTLYEGT-TAI- 455 Query: 452 LDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALA 511 +G + F F + +D G + + ++D+I + G R E+ ALA Sbjct: 456 --------QGQDFF---FRKIVKDGGVALTWLAGRIQDTID---AEVGNGRLKEERAALA 501 Query: 512 SS 513 ++ Sbjct: 502 TA 503 >gi|159900904|ref|YP_001547151.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893943|gb|ABX07023.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 21/254 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV------EGRVGC 255 LTE G+D A+IT+ + D G W + +D ++ A G + Sbjct: 123 LTEPNAGSDAASITTTATQDGDDWIINGGKMWITNGSFADVIVVFASTNRERGARGGISA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+V + G +++ K+G R++ T + F N +LG++ G Sbjct: 183 FIVEKDFA-----GFKVGKVEEKMGLRASHTASIFFENCRVPAKNVLGEIGAGFGVAMKT 237 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + ++ + + A+HY+ R G + D ++ +A++ I A + Sbjct: 238 LDIGRCGLGASALGSAKEAYDLALHYSVERQQFGRPIADFQAIQIKLAEMRTKIYAMEQM 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D K + E++ + K +C + A +I EA++ GG G+ E + R Sbjct: 298 VYHCAALVDAKKPATLESS-------MVKLFCTEAASQIIDEAIQIYGGMGFSREVPLER 350 Query: 433 HYRESPANSILLGS 446 YR++ I G+ Sbjct: 351 MYRDARVTRIFEGT 364 >gi|111019706|ref|YP_702678.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819236|gb|ABG94520.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 49/308 (15%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + +TT + W PK + E + + +TE GG+D+A + + Sbjct: 97 APYLVTLTTEEQRQRWLPKFCTGE-------------LITAIAMTEPSGGSDLAGLKTTA 143 Query: 219 QKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 + DG + ++G K F+++ +D I+ + G + D G R Sbjct: 144 --VKDGATWVINGSKTFITNGTQADLIIVATRTTREKGSKGITLFAVDADTAGFTRGRKL 201 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVS 331 +K+G + T EL F + ++G+L+ G + M +L + A+ ++ R Sbjct: 202 DKVGQPESDTAELFFEDVRVDDTAIIGELD--RGFIHMMNLLPQERISGAVAYLAHTRRI 259 Query: 332 LAEAIHYARRRHVSGG---------ILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 L E + YA+ R G L+ + V K +A +D A ++ L + D Sbjct: 260 LEETVTYAQDRKAFGKTIGSMQWNKFLLAELVTKLDVAQAHVDTCVAAHIAGEL-TAVDA 318 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 AK+ K+W + ++ ++ GG GY+ E +AR ++++ I Sbjct: 319 AKA---------------KWWSSTIQNDILDHCVQIHGGYGYMNEYRVARAWKDARVTKI 363 Query: 443 LLGSGNAM 450 GS M Sbjct: 364 WAGSNEIM 371 >gi|333025649|ref|ZP_08453713.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332745501|gb|EGJ75942.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 608 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 51/312 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + +DG + + G K F++ Sbjct: 139 FDEGNEAQKKVAGIAVERQWGSTMVLTEPDAGSDVGAGRTKAIEQADGTWHIEGVKRFIT 198 Query: 237 S---PMSDAFI--MLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S MS+ + +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMSENILHYVLARPEGGKPGTKGLSLFLVPKYEFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G +++ T E+ F + G+L+GD + G + +I+ + + +++ + Sbjct: 259 GLKASNTCEMTFGDRHPAKGWLIGDKH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLN 316 Query: 335 AIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLA---N 378 A+ YA+ R V G L + P ++R++ AL A + Sbjct: 317 ALEYAKER-VQGPDLANFTDKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVMHTAAVQD 375 Query: 379 SFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 S ++ E+AA ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 376 SIAVKEAAGEDAAELHALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQYI 435 Query: 435 RESPANSILLGS 446 R++ +++ G+ Sbjct: 436 RDAKIDTLYEGT 447 >gi|299770605|ref|YP_003732631.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298700693|gb|ADI91258.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 390 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + S G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLVEKSMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|118464122|ref|YP_882794.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118165409|gb|ABK66306.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 386 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 48/317 (15%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G + + + ++AL T + + W PK + E + + +TE G Sbjct: 93 GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------LITAIAMTEPGTG 138 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +D+ I ++ K D Y L+G K F+++ + SD I++AQ + G L+ + Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLVVERGM 197 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313 G R +KIG + T EL F++ F +L+ +L P E + Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFTDVHVPAENLLGQEGMGFIYLMQNL-----PQERIS 252 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I A+M+ + M L + + Y + R G + + +A++A + + Sbjct: 253 I------AVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSRFVLAELATEATVVRMMV 306 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + K +E+AA A K++ + +I ++ GG GY+ E +AR Sbjct: 307 DEFVRLHLDHKLTAEQAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYPVARA 359 Query: 434 YRESPANSILLGSGNAM 450 Y ++ +I G+ M Sbjct: 360 YLDARVQTIYGGTTEIM 376 >gi|240171384|ref|ZP_04750043.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium kansasii ATCC 12478] Length = 609 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 47/296 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVEQPDGTWHIEGVKRFISGGDVGDTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP L D G NG+ L++K+G +S+ T EL F T G+L+ Sbjct: 224 TKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLEHKMGLKSSPTCELTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347 G V G + ++ + + + S + A+ YA+ R V G Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSTGTLSTGYLNALAYAKER-VQGADLTQMTDKTA 340 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397 ++ P ++R++ AL A D A ++ A ++ Sbjct: 341 PRVTIMRHPDIRRSLMTQKAYAEGLRALYLYAAAHQDNAVAQHVSGADPDMAHRVDDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 P+ K + A V+ E+++ +GGSG++ + I ++ R++ +S+ G+ LD Sbjct: 401 PVVKGVGSERAYEVLTESLQTLGGSGFLTDYPIEQYIRDAKIDSLYEGTTAIQALD 456 >gi|226323698|ref|ZP_03799216.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758] gi|225207882|gb|EEG90236.1| hypothetical protein COPCOM_01473 [Coprococcus comes ATCC 27758] Length = 383 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 26/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA-----QVEGR 252 GLTE GTD A Q + + DG + L+G K F+++ +D +I++A + GR Sbjct: 123 FGLTEPGAGTD--AQGQQTKAVLDGDEWVLNGSKCFITNGKEADVYIIIAVTGIVEKRGR 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + ++E +P G + + K+G R ++T EL F + + N+ + Sbjct: 181 KMKEISAFIVEKDTP-GFTFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGAQGKGF 236 Query: 313 KILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 I ++ LD + ++ + +AE I Y + R G + + +AD+A + Sbjct: 237 GIAMHTLDGGRIGIAAQALGIAEGALDRTIAYVKERKQFGRTIGQFQNTQFQLADMATKV 296 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + ++ A + K S EAA A++ + ++A V +A++ GG GYI Sbjct: 297 EAAKMMVYKAAMAKATQKVYSVEAAQAKL-------YAAEVAMEVTTKAVQLHGGYGYIR 349 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 350 EYDVERMMRDAKITEIYEGT 369 >gi|289937513|ref|YP_003482115.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289533204|gb|ADD07553.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 379 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 140/300 (46%), Gaps = 41/300 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 +M+ + ++W PK+ S + VA ++E G+++A I + + Sbjct: 95 NMIVEFGDEWMKEEWLPKVASGD-------------VASCSMISEPAHGSNVAGIETVAE 141 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GR----VGCFLVPRLLEDGSPNGLCYQ 273 K D Y L+G+K W + ++D +++A+ G + FL+P +G+ + Sbjct: 142 KDGDE-YILNGNKMWITNGTVADVGVVMAKTTPGERHRGITAFLLPM-----DTDGVLTE 195 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MKILIYLDSAIMSVSGMRVS 331 ++ NK+G R++ E+ + + + NV G V++ +++ + S +V+ + Sbjct: 196 KIDNKLGIRASDLAEVVIDDA---RVPEENV-IGEVDNGFYQLMEFFASGRTNVAAQAIG 251 Query: 332 -----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 L AI YA R G + + ++ +A++A + AA +L++R A + ++ Sbjct: 252 AAQGALDAAIDYAGEREQFGQKIGEFQAIEHKLAEMATRVEAARSLTYRAATEVE--QNN 309 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + AA MA K + ++A V E ++ GGSGY+ + R+YR++ I G+ Sbjct: 310 QDVAAQFSSMA---KLFASEIAVEVADEGVQVHGGSGYVTDYPAERYYRDARITKIYEGT 366 >gi|187919810|ref|YP_001888841.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718248|gb|ACD19471.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 381 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 26/246 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVGCFL 257 LTE G+D A++ + ++ D Y L+G K F+S + + AF + + G+ G Sbjct: 128 LTEPHAGSDTASLRASARREGDH-YVLNGTKQFISNGSEAGVGIAFAITDKAAGKRGA-- 184 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVE 310 + D + G R+++K+G + T ++ N G V Sbjct: 185 -STFIIDPNAPGYSVTRIESKLGQHTAHTAQIALEGYRVPAENLLGLEGDGYRTVMAGVS 243 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D +I I A +S R +L A+ YAR R GG L + +AD+A + A Sbjct: 244 DGRIGI----AFISAGVARGALDAAVKYAREREAYGGPLTKLQAVAFDLADMAAQVDVAW 299 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A D +EA+ I K + ++A V ++A++ GG GY+ + + Sbjct: 300 QYCLHAARLRDAGFDCIKEAS-------IAKLFASEIAEKVCSDALQIHGGYGYLTDFPV 352 Query: 431 ARHYRE 436 R+ R+ Sbjct: 353 ERYLRD 358 >gi|293611428|ref|ZP_06693723.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826212|gb|EFF84582.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 387 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+A T Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVA--TLQTKAVRDGNYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 185 GISMLLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ +A++R G LID V++ + D+A + + AL Sbjct: 244 NMERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 303 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 304 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 356 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 357 SERIYREVKVNMIGGGAEEIM 377 >gi|285017877|ref|YP_003375588.1| acyl-CoA dehydrogenase [Xanthomonas albilineans GPE PC73] gi|283473095|emb|CBA15600.1| hypothetical acyl-coa dehydrogenase protein [Xanthomonas albilineans] Length = 594 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + +DG + +SG K F+++ D ++LA++ Sbjct: 166 LTEPHCGTDLGLLKTRAEPNADGTWSVSGTKIFITAGEHDLTENIVHLVLARLPDAPPGA 225 Query: 253 --VGCFLVP--RLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + +VP R+ DG N L L++K+G +AT + F G+L+G + Sbjct: 226 KGISLLVVPKYRVARDGRLGERNALRCGALEHKMGIHGSATCVMNFDGAQGYLIGPPHKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR----HVSGGILIDQP-------- 353 + M L + + + A+ YAR R +SG ++P Sbjct: 286 LQAMFTMMNTARLGVGLQGLGLSERAYQNALRYARERLQSRSLSGAKQPEKPADPILVHP 345 Query: 354 ------VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + +A+ + + +A A +A+S + R + + PI+K + Sbjct: 346 DVRRMLLTVKALTEGSRLLALHAASLIDIAHSATDPAEREQADVLVSFLTPISKACQTEW 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A A++C GG GYI E + + R++ ++ G+ LD++ Sbjct: 406 AVETTYHALQCFGGHGYIHEYGMEQLARDARITTLYEGTTGIQALDLIG 454 >gi|317404526|gb|EFV84934.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 382 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGR---VGC 255 LTE G+D A+ ++ D Y L+G K +++ +P++ F ++A+ E R + C Sbjct: 124 LTEPDAGSDAMALRLSAERDGDH-YVLNGTKRYITNAPIAGLFSVMARTAPERRANSISC 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 FLV E G+P GL + K+G T ++ F N LLG G M Sbjct: 183 FLV----EAGTP-GLIIGKPDKKMGQAGALTSDVVFDNCRVPASALLGG-EEGNGFRTSM 236 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++L D + +S + V +A+ A+ YA R G + + +++ IAD ++ Sbjct: 237 RVL---DKGRLHISALCVGIADRLLRDAVKYATERKQFGQPIAEFQLIQAMIADSQAELY 293 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + A D ++ + +AA K + +M V A++ GG+GY+ E Sbjct: 294 AARCMVLDAARLRDRGENTTMQAA-------CCKLYATEMVGRVADRAVQIHGGAGYMSE 346 Query: 428 RSIARHYRE 436 ++ R YR+ Sbjct: 347 YAVERFYRD 355 >gi|239932480|ref|ZP_04689433.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291440843|ref|ZP_06580233.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291343738|gb|EFE70694.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 390 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D A++ ++ + D + ++G K W ++D + ++A+ EG G F Sbjct: 133 LSEPASGSDAASLRTRAVRDGD-HWVITGTKAWITHGGIADFYTVMARTGEEGPRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP G GL + K+G + + T ++ G + D + I L Sbjct: 192 LVP-----GDAEGLSAAAPEKKMGMKGSPTAQVHLD---GVRVPDSRRLGEEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++ V LA EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDGGRLGIAACAVGLAQAALDEALRYAAERRQFGRPIADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + +++AA A K C A V +A++ +GG GY + Sbjct: 304 ALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDAVQILGGYGYTADFPA 356 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 357 ERYLREAKVLQIVEGT 372 >gi|152985560|ref|YP_001348044.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150960718|gb|ABR82743.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 375 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 30/272 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG- 254 LTE + G+D + + ++ ++ D Y L+G K F++S +++ V G+ G Sbjct: 121 FALTEPQAGSDASFLKTRARRDGDH-YVLNGAKQFITSGSHAGMVIVFAVTDPEAGKRGI 179 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD----LNVST 306 F+VP +P G R+++K+G ++ T +L F++ LG+ ++ Sbjct: 180 SAFIVP----TDTP-GYEVVRVEDKLGQHASDTCQLAFNDLRIPASLRLGEEGEGYRIAL 234 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +E +I I A +V R + A YA R G +I+ + +AD+A I Sbjct: 235 ANLEGGRIGI----AAQAVGMARAAFEAARDYAHERETFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A + A S E A + K + +MA V + A++ +GG GY++ Sbjct: 291 AVARQM-------VHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAIQTLGGYGYLK 343 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + + R YR+ I G+ + L + L Sbjct: 344 DFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375 >gi|224050691|ref|XP_002196781.1| PREDICTED: similar to isovaleryl Coenzyme A dehydrogenase [Taeniopygia guttata] Length = 487 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 44/272 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L ++E G+D+ ++ + K D + L+G+K W + P +D I+ A+ + Sbjct: 226 LAMSEPNAGSDVVSMKLKADKKGD-FFVLNGNKFWITNGPDADVLIVYAKTDMNAVPASQ 284 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304 + F+V R G P Q+L +K+G R + T EL F N G L + V Sbjct: 285 GITAFIVER----GMPGFRTAQKL-DKLGMRGSNTCELIFEDCKVPAENVLGTLSKGVYV 339 Query: 305 STGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 ++ LD + +SG M+ L AI Y R G + +M+ + Sbjct: 340 ---------LMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKM 390 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ + A + +A + D+ +++ A + + + A V + ++C+ Sbjct: 391 ADMYTRLMACRQYVYNVAKACDQGHFNAKDCAGVIL-------YSAECATQVALDGIQCL 443 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG+GYI + + R R++ I G+G + V Sbjct: 444 GGNGYINDYPMGRFLRDAKLYEI--GAGTSEV 473 >gi|219849259|ref|YP_002463692.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543518|gb|ACL25256.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aggregans DSM 9485] Length = 389 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 37/262 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF--LV 258 LTE G+D A I + ++ D + L+G K W + +D ++ A + +G + Sbjct: 125 LTEPNAGSDAAHIQTSAERRGDE-WVLNGQKMWITNGSFADVIVVFAVSDKNLGARGGIT 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILI 316 ++E P G ++++K+G R++ T L F D V P E++ ++ + Sbjct: 184 AFIVEKTMP-GFRVGKIEDKMGLRASHTASLYFE--------DCRV---PAENVLGQVGM 231 Query: 317 YLDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAIADIAL 364 A+ ++ R L EA +R+ R+ G + + ++ +AD+A+ Sbjct: 232 GFPLAMRTLDIGRCGLGASSIGSAKEAFELSRKYMITRYQFGRPIAEFQALQFKLADMAV 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + + A D + + E++ I KY+C +MA +I EA++ GG G+ Sbjct: 292 KLYTMEQIVYDCARRVDAGQQATLESS-------IVKYYCTEMASQIIDEAIQIHGGMGF 344 Query: 425 IEERSIARHYRESPANSILLGS 446 E + R YR++ I G+ Sbjct: 345 SRELPLERMYRDARVTRIFEGT 366 >gi|23573437|gb|AAN38724.1| putative acyl CoA dehydrogenase [Mycobacterium abscessus] Length = 431 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 42/297 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + W PK+ S E IG + +TE G+D+ ++ ++ + DG Sbjct: 156 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 199 Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y ++G K F+++ +D I++A+ + G + ++ + G ++ +KIG R Sbjct: 200 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 259 Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338 T EL F LLG G ++ M L L A+ +V+ M ++L + + Y Sbjct: 260 QDTSELFFDEVRVPRSHLLGQAE-GQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 318 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393 R R G + K +A+ A + A + LA D Sbjct: 319 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQ---------- 368 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W + A V+ + M+ GG GY+ E I+R + + I G+ M Sbjct: 369 --TVAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 423 >gi|23099848|ref|NP_693314.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22778079|dbj|BAC14349.1| acetyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 594 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 35/313 (11%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT-SVAIGLGLTEKRGGTD-IA 212 SVT + V + + P V F + N P T + LTE G+D + Sbjct: 109 SVTHGAHVGIGSLPIV-------FFGNDEQKENYLPKLATGELLAAYALTEPSSGSDALG 161 Query: 213 AITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270 A T+ + Y L+G K W +S +D FI+ A+++G F+V R P G+ Sbjct: 162 AKTTAKLNDAGTHYILNGEKQWITNSAFADVFIVYAKIDGEHFTAFIVEREF----P-GV 216 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325 + K+G +S++T L + LLG+ G V IL A+ V Sbjct: 217 STGPEEKKMGIKSSSTRTLVLEDAEVPIENLLGE--KGRGHVIAFNILNVGRYKLAVGGV 274 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF----- 380 G + ++ A Y R + + K +A +A I A + +R F Sbjct: 275 GGSKRAIELAAKYTNERKQFNTPISSFNLTKEKLATMAAGIYANESSVYRTVGLFEQRMG 334 Query: 381 ---DEAKSRSEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 DE E A + +I +TKY ++ V+ EA++ GG G+++E + R Sbjct: 335 ALTDEQLKDGREVARSIAEYQIECSMTKYMATELLDYVVDEAVQMHGGYGFMQEYEVERA 394 Query: 434 YRESPANSILLGS 446 YR+S N I G+ Sbjct: 395 YRDSRINRIFEGT 407 >gi|66810674|ref|XP_639044.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4] gi|74854645|sp|Q54R47|GCDH_DICDI RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD; Flags: Precursor gi|60467671|gb|EAL65690.1| glutaryl-CoA dehydrogenase [Dictyostelium discoideum AX4] Length = 420 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 26/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D A + ++ K S G Y L+G K W +SP++D F++ A+VE G + F+ Sbjct: 164 FGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVENGDIRGFV 223 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310 + + ++ GL +++ K+ R++ T VE+ + F + G GP Sbjct: 224 LEKGMK-----GLSAPKIEGKLSLRASITGMIVMEDVEVPPTAMFPEVKG----LRGPFS 274 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + Y S+ + A Y R G L + ++ +AD+A +I+ Sbjct: 275 CLNKARY-GIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAANQLYQKKLADMATEISLGL 333 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +++ D K+ E + + K C + + ++ + +GG+G +E + Sbjct: 334 QACYQVGRLIDAGKATPERIS-------LIKRNSCGKSLDIARQSRDMLGGNGIADEYHV 386 Query: 431 ARH 433 RH Sbjct: 387 IRH 389 >gi|326796145|ref|YP_004313965.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1] gi|326546909|gb|ADZ92129.1| Butyryl-CoA dehydrogenase [Marinomonas mediterranea MMB-1] Length = 600 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 75/338 (22%), Positives = 135/338 (39%), Gaps = 55/338 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ + ++ + SDG Y +SG K F+S+ D I+LA++ Sbjct: 165 LTEPHCGTDLGMLKTKAEPNSDGSYAISGTKIFISAGEHDMADNIVHIVLARLPDAPAGT 224 Query: 253 --VGCFLVPR--LLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ + E G N + +++K+G NAT + F GFL+G N Sbjct: 225 KGISLFIVPKFNVNETGDVADRNAVSCGSIEHKMGIHGNATCVMNFDGAKGFLIGPPNRG 284 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGI--------LIDQP 353 + L +A+ ++ + ++ YA+ R +SG +I P Sbjct: 285 LNCMFTFMNTARLGTALQGLAHAEWAYQNSVVYAKDRLQMRALSGAKSPDKAADPIIVHP 344 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-----EAAYARIMAPITKYWCCKMA 408 ++R + AL + D+ S+ ++ PI K + + Sbjct: 345 DVRRMLLTQRAFAEGGRALIHYSSLLVDKTTKGSDEEKAEAEELLSLLTPIAKAFLTETG 404 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEKGTNLF 465 + ++ GG G+I E + ++ R+S + + G+ LD+L L+ +G L Sbjct: 405 FESANQGLQVFGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGATL- 463 Query: 466 EQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARF 503 ++ I+ CKE KG RF Sbjct: 464 ---------------RRFTKIIH---KFCKEHKGDKRF 483 >gi|325527857|gb|EGD05120.1| acyl CoA dehydrogenase oxidoreductase protein [Burkholderia sp. TJI49] Length = 379 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 23/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVEGRVGCFLV 258 LTE + G++ A +T+Q + DG Y + G K F+S+ + FI++ A+ +G + Sbjct: 124 FALTEPQAGSNPAGMTTQAVRDGDG-YRIHGVKHFISNADAAQFIVVYAKTAPELGTRGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF------SNTFGFLLGDLNVSTGPVEDM 312 + D G+ + +G E+ F SN G +G M Sbjct: 183 SAFVVDRDTPGVSVSAPEKLMGIHGAPAHEVAFDCVVPASNRLG------EEGSGFRTAM 236 Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 K+L LD A S+ +L +AI +A++RHV G L ++ ++ AD+ + AA Sbjct: 237 KVLDNSRLDVAATSLGIAEAALGDAIDWAKQRHVGGEPLANKQGLQWRFADMKTQLEAAW 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ +A +R +A + K + +M V A++ GG G+ E I Sbjct: 297 LLTL-------QAAARRAAGEPFTDLASMAKLYASEMVAFVTDAALQVHGGYGFTREMRI 349 Query: 431 ARHYRESPANSILLGS 446 R R++ I GS Sbjct: 350 ERLVRDARILRIYEGS 365 >gi|221114736|ref|XP_002158662.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 423 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 49/304 (16%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 + +A T + + PK+ S E V L ++E G+D+ ++ + Sbjct: 135 NQIARNGTKNQKEKYLPKLISGE-------------VFGSLAMSEVGSGSDVVSMKLRAD 181 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271 + + Y L+G+K W + P S+ F++ A+ + CF++ R ++ G Sbjct: 182 RDGND-YILNGNKFWITNGPDSETFVVYAKTVSDKEKAARGITCFIIERGMK-----GFS 235 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG 327 +K+G R + T EL F N +LG+LN + + +L LD + +SG Sbjct: 236 TMPKLDKLGMRGSNTCELVFDNCRVPAENILGELN------QGVYVLFSGLDIERLVLSG 289 Query: 328 MRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + + +A+ Y R G + +M+ +ADI + ++A+ + + +A + D Sbjct: 290 GPLGIMQAVSDTVFPYVHARKQFGESVGHFQLMQAKLADIYVALSASRSYVYSVARAIDS 349 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 S++ A + A + A V + ++C+GG+GYI + R R++ I Sbjct: 350 GHFNSKDCAGVILYAS-------EKATQVALQGIQCLGGNGYINDYPTGRFLRDAKLYEI 402 Query: 443 LLGS 446 G+ Sbjct: 403 GAGT 406 >gi|157864298|ref|XP_001680859.1| acyl-coenzyme a dehydrogenase [Leishmania major strain Friedlin] gi|68124151|emb|CAJ02134.1| putative acyl-coenzyme a dehydrogenase [Leishmania major strain Friedlin] Length = 416 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 17/249 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + +++ + +LA+ EG F+V Sbjct: 164 VTEPTGGSDVAGMKTVAKKEGD-KWVINGSKMWITNGGVANWYFVLARSEGGFTGFIV-- 220 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-SNTFGFLLGDLNVSTGPVEDMKILIYLD 319 D G+ + + +G R + T + F + V G M++ + Sbjct: 221 ---DADTPGVSLGQKEVMLGQRCSDTRSIMFENVVVPEENVVGEVGKGFQVAMRVFDFTR 277 Query: 320 SAI-MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 SA+ +S G+ R + EA YAR R G + + +A++A + A +++R Sbjct: 278 SAVAISAVGLARRATDEATKYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 337 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + A+ A++MA +A A++ GG+GY + + YR+ Sbjct: 338 WETDQGRRNTYYASCAKMMAS-------NLAEKCSTNAVQIFGGNGYNTGYPVEKLYRDC 390 Query: 438 PANSILLGS 446 SI G+ Sbjct: 391 KIFSIYEGT 399 >gi|170737680|ref|YP_001778940.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169819868|gb|ACA94450.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 377 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A+ I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|56697631|ref|YP_168001.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56679368|gb|AAV96034.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 387 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + S G + +K+G R + T EL F + F +LG + +G Sbjct: 187 TAFLIEKSMKGFSTSKHFDKMGMRGSNTAELVFEDVEVPFENVLGQEGRGVAVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGKPIGSFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYIYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLS 350 Query: 427 ERSIARHYRESPANSILLGS 446 + +++R +R++ I G+ Sbjct: 351 DSAVSRIFRDAKLMEIGAGT 370 >gi|115359133|ref|YP_776271.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria AMMD] gi|115284421|gb|ABI89937.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria AMMD] Length = 377 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|54027305|ref|YP_121547.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54018813|dbj|BAD60183.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 384 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 12/241 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T+ ++ D Y ++G K +++S F++ A G G + Sbjct: 126 LAITEPGGGSDVGHLTTTARRDGDH-YIVNGAKTYITSGCRADFVVTAVRTGGPGSAGIS 184 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ + G R +K+G R++ T EL + + L+G N + + + Sbjct: 185 LLVVEKDTPGFTVSRKLDKMGWRASDTAELSYVDVRVPVENLVGQENSGSYQIAAAFVSE 244 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A+ + + + L + + R R G LI + ++ + ++A I A + + Sbjct: 245 RVGLAVQAYAQAQRCLDLTLEWVRNRETFGRPLISRQAVQNTVTEMARRIDVARVYTREV 304 Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A E ++ E +A+ A W V +A++ GG GY+ E + R YR Sbjct: 305 ARRSAEGETDLIAEVCFAKNTAVEAAEW-------VAHQAVQLFGGLGYMRESEVERQYR 357 Query: 436 E 436 + Sbjct: 358 D 358 >gi|167628208|ref|YP_001678707.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] gi|167590948|gb|ABZ82696.1| acyl-coa dehydrogenase [Heliobacterium modesticaldum Ice1] Length = 581 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 47/356 (13%) Query: 187 NKAPMQKTSVAIGLG-------LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP 238 N+ Q+ A+G G LTE G+D ++ + DG Y L+G K ++++ Sbjct: 124 NEEQKQRYLPALGSGEKIAAYCLTEPGSGSDALGAKTKAIRSEDGRHYILNGTKQYITNA 183 Query: 239 -MSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT--VELEFSNT 294 +D FI+ A+V+G + F+V R +P GL + K+G + ++T V LE + Sbjct: 184 GFADVFIVYAKVDGDKFTAFIVDR----DTP-GLSIGPEEKKMGIKGSSTCPVILEDAKV 238 Query: 295 FGF-LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 LLG++ ++ + + + +L + YA R + P Sbjct: 239 PAKNLLGEIGKGHHIAFNILNIGRFKLGAGCIGSAKWALHLSAKYANARVQFNSPIAHFP 298 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE----EAAYARIMAPITKYWCCKMAP 409 +++ IA++A+++ A ++ +R A ++A E A YA + I K +M Sbjct: 299 LIQEKIANMAIELYGAESVIYRTAGLIEKALEVKEPLQATAEYA-VECSICKILASEMLD 357 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA---MVLDVL---------NL 457 V E ++ GG GY +E I R YR++ N I G+ ++ D L L Sbjct: 358 LVADEGVQIHGGYGYTQEYEIERIYRDARINRIFEGTNEINRLLIPDTLLKRAMKGEIPL 417 Query: 458 LEKGTNLFEQLFS-----------TLEQDLGSSGKKVITILRDSISLCKEDKGLAR 502 L L +LFS +E+DL KK++ + I++ K K LA+ Sbjct: 418 LAAAQRLQSELFSLGIHADNGMPLNIEEDLIERSKKIVLFVA-GIAVQKYQKALAQ 472 >gi|118473149|ref|YP_888359.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118174436|gb|ABK75332.1| butyryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 399 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 16/270 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D ++ T+ G Y ++G KWF++ ++D I+LA +E + Sbjct: 121 VAISEAGAGSDFSSATTTATPDGKGGYIINGQKWFVTVGDVADFLIVLAYIEPEHAPTM- 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVED 311 L D + G+ + E F++ G + L ++ + Sbjct: 180 --FLIDVATPGVKITDVPRYTHTFVYEHPEFTFTDVHVGPEAVLGGVGAGLELTRDWFTE 237 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +++I ++ +L A+ +A+ R G LI++ +++ IAD +DI A Sbjct: 238 ERLMI----GARTIGAAERALTLAVEWAKDRVQGGQPLINRQLIQGMIADSVVDITTNRA 293 Query: 372 LSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + ++A FD A + +++ A K + + V+ ++ GG GYI + + Sbjct: 294 YTHQVAWEFDHADPTNADQRKTLHAKAATVKLAASEASNRVVDRCVQIFGGRGYIRDYPV 353 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R +RE + I G+ L + N K Sbjct: 354 ERLWRELRVDRIWEGTSEIQRLVIANETNK 383 >gi|313219987|emb|CBY30852.1| unnamed protein product [Oikopleura dioica] Length = 408 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 27/268 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGR 252 GL +TE G+D+ ++ + K D Y ++G+K W + P++D ++ A+ +GR Sbjct: 147 GLAMTELNAGSDVMSMKTNAVKKGD-FYVINGNKFWITNGPVADHIVLYAKTNPSSNDGR 205 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG 307 + F++ D G Q + K+G R + T +L F N L G+ + + Sbjct: 206 SITAFII-----DTKTEGFSAQEIPGKLGMRGSPTGDLTFENMKIHESMVLKGEGHGAAV 260 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + I L +AI V + ++ A YA R + + +++ +AD+ ++ Sbjct: 261 LMSGLNIERILAAAI-PVGIAQAAIDCAFKYAHEREQFNQRIGEFQLVQGKMADMYTSLS 319 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + + +A D+ + + + A + +C + A + +A++ +GG+G+I + Sbjct: 320 ACRSYLYNVARHADKNEPTNHDCAGLVL-------YCAEKATQICLDAIQILGGNGFIND 372 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL 455 R+ R++ I G+G + V V+ Sbjct: 373 YPTGRYLRDAKLWEI--GAGTSEVRRVI 398 >gi|77460169|ref|YP_349676.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77384172|gb|ABA75685.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 385 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 14/264 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHINK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ + G+ +K+G RS+ T ++ F N + G M++L + Sbjct: 182 SLIMVPMNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIG-HEGAGFMMQMLQFQ 240 Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + G+ + I Y + R G LID V+ +A++ +I AL + Sbjct: 241 EERLFGAANMIKGLEYCVDSTIEYCKERKTFGNALIDNQVIHFRLAELQTEIECLRALVY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + + + A+ A++ A ++ V ++ GG G++ + +AR Y Sbjct: 301 QATEQYVKGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVARAY 353 Query: 435 RESPANSILLGSGNAMVLDVLNLL 458 R+ SI G+ M+ + L+ Sbjct: 354 RDVRLVSIGGGADEIMLGIICKLM 377 >gi|109896646|ref|YP_659901.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109698927|gb|ABG38847.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 391 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/286 (21%), Positives = 132/286 (46%), Gaps = 26/286 (9%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP + +G++E G+D+A + + + D Y ++G K W ++ +D +LA Sbjct: 119 APAVAGDMVACIGVSEPGAGSDVAGLKTTAKSDGDD-YVINGSKMWITNATQADWICLLA 177 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 +G V ++ +P G+ + NK+G R++ T ++ F+N +G+ N Sbjct: 178 NTSDGNVHANKSLIVVPLNTP-GIEISKPLNKLGMRASDTGQIFFNNVRVPKRNRIGEEN 236 Query: 304 VSTGPVEDMKILIYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 M+++ + + + + + GM + + I + + RH G +++ V+ + Sbjct: 237 KGF----TMQMMQFQEERMYAAASAHKGMERMIQDTIGWCKERHTFGQPVLNNQVVHFKL 292 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++ A AL++R + E+A Y +A + K ++ V ++ Sbjct: 293 AELQTEVEALRALTWRACQQHIDG----EDATY---LASMAKLKSGRLWREVTDSCLQYW 345 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 GG G++ + +AR YR++ SI GS M L ++ K ++F Sbjct: 346 GGMGFMWDNPVARAYRDTRILSIAGGSDEMM----LGIIAKHMDIF 387 >gi|271962563|ref|YP_003336759.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270505738|gb|ACZ84016.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] Length = 381 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 35/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 +G+TE G+D+ I + + D Y L+G K F+++ + SD +++A+ + G Sbjct: 124 VGMTEPGAGSDLQGIRTTAVREGDH-YVLNGQKTFITNGINSDLVVVVAKTDPAAGARGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFLLGDLN 303 L+ + G R KIG + T EL F N F L+G+L Sbjct: 183 SLLVVERGMEGFSRGRNLEKIGMHAQDTAELFFDNVRVPAANLLGEEEGQGFFQLMGNL- 241 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + I A+M+V+ L I Y + R G + + +A++ Sbjct: 242 ----PQERLSI------AVMAVAAAETVLQTTIEYCKNRKAFGRNIGSFQNTRFVLAELD 291 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ A + + + + +AA A K+W ++ VI ++ GG G Sbjct: 292 TEVEIARHYVDKCIRALNAKELSVVDAAKA-------KWWTTELQTKVIDRCLQLHGGYG 344 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 Y+ E +A+ + +S +I G+ M Sbjct: 345 YMMEYPVAKAWVDSRVQTIYGGTTEIM 371 >gi|194751756|ref|XP_001958191.1| GF10801 [Drosophila ananassae] gi|190625473|gb|EDV40997.1| GF10801 [Drosophila ananassae] Length = 415 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 155 FALTEPGAGSDAFSLKTVAKK--DGKDYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 212 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T + F N TFG + G Sbjct: 213 ITTFIVDRDTPGLIVNKPEDKLGIRASGTCMITFDNVRVPEENILGTFGH---GYKYAAG 269 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + ++ V LA+ I Y R G + + M+ IA + Sbjct: 270 ---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGEAIYNFQSMQHQIATV 320 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A KY+ ++A + ++ +GG Sbjct: 321 ATEIDAARLMTYNAARLQEQGVPFQKEAAMA-------KYFASEVAQRAAIKCVDWMGGV 373 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + ++YR+ +I G+ N + + ++K Sbjct: 374 GFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 411 >gi|187251889|ref|YP_001876371.1| acyl-CoA dehydrogenase domain-containing protein [Elusimicrobium minutum Pei191] gi|186972049|gb|ACC99034.1| Acyl-CoA dehydrogenase domain protein [Elusimicrobium minutum Pei191] Length = 547 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKI--SDGI---YCLSGHK-WFLSSPMSDAFI 244 + K + + G TE G+D+ ++ ++ + + DG Y ++G K W + ++D + Sbjct: 117 IAKEQLLVAYGATEADAGSDLVSLRTRAEHVLNPDGTLKGYKITGSKMWISNGGVADIYT 176 Query: 245 MLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 +LA G F+V E +P G ++K G R + T L F + + L+G Sbjct: 177 VLAIAPGGPSWFIV----EKNTP-GFTSDAHEDKHGIRLSNTAGLSFDDVYVPVENLIG- 230 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-QPVMKRA 358 L G ++ + Y L A + + AIHYA++R +GG L+D Q M + Sbjct: 231 LKEGQGLLQAQAVFGYTRLMVAAFGLGAGEEATETAIHYAQQRIQAGGPLVDKQGYMLKL 290 Query: 359 IADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 I + AA A A D+ + E A I KY+ + A++ Sbjct: 291 ITPHYIRFEAARAFIDNTAKMLDDNNHGFATEGA-------IAKYYATEEGNNAAEHAIQ 343 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 +GG GY +E S+ + R+ I G+ M + + Sbjct: 344 ALGGFGYTKEFSVEKIKRDVKITMIYEGTNEVMEMTI 380 >gi|108800151|ref|YP_640348.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119869279|ref|YP_939231.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126435776|ref|YP_001071467.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|296165239|ref|ZP_06847786.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|108770570|gb|ABG09292.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119695368|gb|ABL92441.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126235576|gb|ABN98976.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] gi|295899428|gb|EFG78887.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 381 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 42/297 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + W PK+ S E IG + +TE G+D+ ++ ++ + DG Sbjct: 106 TEELRAQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--LLDGD 149 Query: 226 -YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y ++G K F+++ +D I++A+ + G + ++ + G ++ +KIG R Sbjct: 150 EYVITGSKTFITNGQQADLIIVVAKTDPSQGAAGISLIVVEADRAGFRRGKVLDKIGQRG 209 Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHY 338 T EL F LLG + G ++ M L L A+ +V+ M ++L + + Y Sbjct: 210 QDTSELFFDEVRVPRSHLLGQ-SEGQGFIQLMTQLPQERLIVAVGAVAAMELALEQTLKY 268 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYA 393 R R G + K +A+ A + A + LA D Sbjct: 269 TREREAFGRPVFGFQNTKFTLAEAATETRIARVFLDYCIDLHLAGQLDVQT--------- 319 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W + A V+ + M+ GG GY+ E I+R + + I G+ M Sbjct: 320 ---VAMAKWWTTERAMKVLDDCMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373 >gi|329898468|ref|ZP_08272409.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088] gi|328920820|gb|EGG28269.1| Glutaryl-CoA dehydrogenase [gamma proteobacterium IMCC3088] Length = 399 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D + ++ + + G Y LSG K W + Sbjct: 121 FGTEEQREKYLPKLATGEWIGCFGLTEPDYGSDPGGMITRARSVEGG-YRLSGAKMWISN 179 Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ +G++ F +LE G P GL +++ K+ R++ T E+ + F Sbjct: 180 SPIADVFVVWAKTDDGQIRGF----ILEKGMP-GLSAPKIEGKLALRASITGEIVMEDVF 234 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 LL ++ GP + + Y A ++ A Y R G L Sbjct: 235 VSEEQLLPNVKGLKGPFSCLNMARY-GIAWGALGAAETCWQTARAYTLERSQFGRPLAAN 293 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 +++ +AD+ DIA L F + ++ +++ I + C K A + Sbjct: 294 QLIQLKLADMQTDIALG------LQGCFRAGQQLCDDGIAPELISLIKRNSCAK-ALHIA 346 Query: 413 AEAMECIGGSGYIEERSIARH 433 +A + +GG+G ++ + RH Sbjct: 347 RQARDMLGGNGISDQYPVMRH 367 >gi|170700791|ref|ZP_02891783.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] gi|170134318|gb|EDT02654.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] Length = 377 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|83648022|ref|YP_436457.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636065|gb|ABC32032.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 596 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 34/289 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE GTD+ I ++ + DG Y ++G K F++ D ++LA++ Sbjct: 166 LTEPHSGTDLGIIRTKAEPNGDGSYAITGTKIFITGGEHDLSENIIHLVLAKLPDAPAGS 225 Query: 253 --VGCFLVP--RLLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FL P ++ E+G N + +++K+G +++AT + F G+L+G+ N Sbjct: 226 RGISLFLAPKFKVTEEGGVGERNPVFCGSIEHKMGIKASATCVMNFDGAQGWLVGEPNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR----RHVSGGILIDQ--------P 353 + M L + ++ S A+ YA+ R +G + D+ P Sbjct: 286 LACMFTMMNYERLGVGVQGLAAAERSYQNAVEYAKDRIQGRSATGVVAKDKAADPIIVHP 345 Query: 354 VMKRAIADIALDIAAATALSFRLANSF------DEAKSRSEEAAYARIMAPITKYWCCKM 407 ++R + + I + A S +A D+A ++ A ++ P+ K + Sbjct: 346 DVRRMLMTMRALIEGSRAFSTYVAKYLDISKYSDDATAKQHAEAMVALLTPVAKAFLTDR 405 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + GG GYI E + R+ I G+ LD++ Sbjct: 406 GLDSTVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMG 454 >gi|332286282|ref|YP_004418193.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7] gi|330430235|gb|AEC21569.1| putative isovaleryl-CoA dehydrogenase [Pusillimonas sp. T7-7] Length = 392 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + QK D Y L+G+K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMKLRAQKKGD-RYVLNGNKMWITNGPDADTLVVYAKTDPEAKQRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 187 TAFIIEKGYKGFSIAQKLDKLGMRGSHTGELVFQDCEVPEENILGELN---GGVKVLMSG 243 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ + M+ + + Y R G + + +++ +AD+ + A+ A Sbjct: 244 LDYERAVLAGGPLGIMQGVMDVVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQASRAF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + + D+ S A I +C + A + E ++ +GG+GYI E R Sbjct: 304 CYAVGKNLDQLGSGHAREVRKDCAAVIL--YCAEKATWMAGEGIQILGGNGYINEYPTGR 361 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 362 LWRDAKLYEIGAGT 375 >gi|315040277|ref|XP_003169516.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] gi|311346206|gb|EFR05409.1| long-chain specific acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] Length = 541 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 29/271 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 265 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GGPGM 323 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 324 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 382 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 383 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 436 Query: 367 AAA----TALSFRLANSFDEAKSRSEEAAYARIMAPITKY--WCCKMAPAVIAEAMECIG 420 A+ L F+ N ++A + A A + A T +C + A + G Sbjct: 437 EASFNWLENLVFQCQNMDEDAAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLSYSRG 496 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451 G G I R YR+ A +I GS M+ Sbjct: 497 GQG----GKIERLYRDVRAYAIPGGSEEIML 523 >gi|302545219|ref|ZP_07297561.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302462837|gb|EFL25930.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 41/272 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV-----EGR 252 + +TE G+D+A + + + DG Y L+G K F++ ++D ++ A+ E R Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDR 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298 G + L+ D + G R K+G +++ T EL F++ FG+L Sbjct: 184 RGGISI--LVVDTTSEGYAVGRKLEKLGLKTSDTAELSFTDVKVPVEDLLGEEGKAFGYL 241 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 +L P E + I + + + S V A+A Y + R V G + K Sbjct: 242 AHNL-----PQERLGIAV----SAYAQSAAAVEFAKA--YVQDREVFGKSVASFQNTKFT 290 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD ++ A A+ R + D + + +AA A++ + + A VI + ++ Sbjct: 291 LADCKAEVDAMQAVVDRALEAHDAGELTAADAASAKL-------FTTEHAAVVIDKCLQL 343 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ I G+ M Sbjct: 344 HGGYGYMMEYPIARLYADTRVTRIYGGTSEVM 375 >gi|226954072|ref|ZP_03824536.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226835197|gb|EEH67580.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 428 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 26/226 (11%) Query: 223 DGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--- 278 +G + ++G K + +D FI+ A+ G+ F+V C + + K Sbjct: 218 NGKFYITGEKTLVVLGDTADVFIVSAEWNGKPDIFVVQ-----------CDETIAIKANP 266 Query: 279 -IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 +G ++ T L+F+ T LGD + D+ L++ AI + ++ A I Sbjct: 267 AMGLKAAETATLQFNQTPALSLGDTDFDYTAFVDLGNLMWCAMAIGTCEAIK---AYCIK 323 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA R G + + + IAD+A++I A L A+ + + EA AR++ Sbjct: 324 YANERTAFGEPISHRQSVAFMIADMAIEIDAMRMLVLNAASLAEAGQPFHREAYLARLL- 382 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 C + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 383 ------CAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 422 >gi|224005380|ref|XP_002296341.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335] gi|209586373|gb|ACI65058.1| acyl-coa dehydrogenase [Thalassiosira pseudonana CCMP1335] Length = 378 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 GL+E G+D A ++ + + ++G K W ++ S+A ++ A + + Sbjct: 116 FGLSEPGNGSDAGAASTTAT-LDGEEWVINGTKAWITNAYESEAAVVFATTDKSLKHKGI 174 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F+VP L G ++K+G R+++T L N L+G+L + Sbjct: 175 SAFVVPTNLP-----GFSLGAKEDKLGIRASSTANLIMENVRIPKSNLIGELG------Q 223 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI + LD + V+G + +A A + YA R+ G + + ++ I+ + + Sbjct: 224 GFKIAMQTLDGGRIGVAGQALGIASASIDCAVKYALERNAFGKPIAELQSIQNKISAMVV 283 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +A L++R A D + + EAA A++ A C +A++ +GG GY Sbjct: 284 ARDSARLLTWRAAQLKDNKERYTREAAMAKLAASEAATMCSH-------QAIQILGGMGY 336 Query: 425 IEERSIARHYRESPANSILLGS 446 + E RHYR++ I G+ Sbjct: 337 VTEMPAERHYRDARITEIYEGT 358 >gi|182438562|ref|YP_001826281.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779209|ref|ZP_08238474.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|178467078|dbj|BAG21598.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659542|gb|EGE44388.1| Long-chain-acyl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 56/311 (18%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + ++ T K W PK + E L +TE G+D+A + + + Sbjct: 99 IKMLATGEQKKRWLPKFATGEE-------------MWALAMTEPGTGSDVAGMKTTAKLS 145 Query: 222 SDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQ 273 DG Y L+G K F++ + +D I+ A+ + R G L D G Sbjct: 146 EDGTHYVLNGAKTFITGGVHADRVIVCARTAAPREDDRRFGISL---FAVDTKSEGYSVG 202 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-----KILIYLDSAIMS---- 324 R +K+G + + T EL F D+ V PVED+ K YL + + S Sbjct: 203 RKLDKLGLKVSDTAELAFV--------DVKV---PVEDLMGEENKGFGYLGTNLASERWG 251 Query: 325 -----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + ++ A Y + R V G + K +A ++ AA A++ R + Sbjct: 252 IAFGAYAQAAAAVRFAKEYVQDRTVFGKTVASFQNTKFELAACQAEVDAAQAVADRALEA 311 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D + + EAA A++ +C ++A VI ++ GG G++ E IAR Y ++ Sbjct: 312 LDAGELTAAEAASAKL-------FCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRV 364 Query: 440 NSILLGSGNAM 450 N I G+ M Sbjct: 365 NRIYGGTSEVM 375 >gi|118464119|ref|YP_881045.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118165406|gb|ABK66303.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 380 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 45/300 (15%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223 +TT + W PK S EY IG + ++E G+D+A I + + D Sbjct: 102 LTTEEQKERWLPKFTSGEY--------------IGSIAMSEPAAGSDLAGIKTTARDEGD 147 Query: 224 GIYCLSGHKWFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+S+ + ++ A G L+ ++EDG +G R +KI Sbjct: 148 H-WVVNGQKTFISNGLLSKLVLTAVKTDPSARHKGISLL--MIEDGM-DGFTRGRKLDKI 203 Query: 280 GNRSNATVELEFSNTF---GFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRV 330 G S T EL F + L+G+LN VS P E + + Y ++ R Sbjct: 204 GQYSADTAELFFEDVRVPKENLVGELNRGFYHLVSNLPSERVGVACY------ALPAARR 257 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L YA R G + V + +A++ + AA A + S ++ +A Sbjct: 258 ALELTKAYALERTAFGQPIGKFQVNRHFLAEMQTKLDAAQAYLDQCVLSVNDGTLSDADA 317 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ +I ++ GG GYI E +AR +R++ + G+ M Sbjct: 318 AG-------LKWWTSEIQWEIIDRCLQLHGGYGYINEYEVARLWRDARVQRLYAGTTEIM 370 >gi|27377727|ref|NP_769256.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27350872|dbj|BAC47881.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 404 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A + ++ +K+SDG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVSDG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASITGEVVMDGVVVPEDALLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE +H AR+ R G L ++++ +AD+ +IA Sbjct: 256 --FGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFGKPLAATQLVQKKLADMETEIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K +A M I K C A + A + GG+G E Sbjct: 314 LGLQGSLRVGRLMDEGK-------FAPEMISIMKRNNCGKALDIARVARDMHGGNGISIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YHVMRH 372 >gi|229488672|ref|ZP_04382538.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] gi|229324176|gb|EEN89931.1| long-chain specific acyl-coa dehydrogenase [Rhodococcus erythropolis SK121] Length = 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 38/278 (13%) Query: 195 SVAIG-----LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-- 246 S+A G + +TE G+D+A I + + DG Y L+G K F++ ++ ++ Sbjct: 114 SIATGEKTLCIAMTEPGTGSDLAGIRTTAKLSEDGTHYVLNGAKTFITGAVNSELCVVVA 173 Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 A+ + R G L+ ++ +P G Y R K+G R++ T EL F++ L Sbjct: 174 RTSAPAEDDRRFGLSLM--VVPTDAP-GFEYGRKLEKLGLRASDTSELSFTDVKVPVADL 230 Query: 299 LGDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 LG+ N P E + I V+ R ++ A Y + R V G + Sbjct: 231 LGEQNKGFSYLGQNLPRERLSI------GSRGVASARAAIEFAKAYVQERQVFGKPVAAF 284 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 K +A+ + ++ AA AL+ R D + + +AA RI K + ++A VI Sbjct: 285 QNTKFVLAECSAEVEAAQALADRGIELDDSGELTAADAA--RI-----KLFGTEVAARVI 337 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + ++ GG GY+ E IAR Y ++ + I G+ M Sbjct: 338 DKCLQLHGGYGYMLEYPIARLYADTRVSRIYGGTSEVM 375 >gi|116049576|ref|YP_791620.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|296389995|ref|ZP_06879470.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|115584797|gb|ABJ10812.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 384 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253 LTE G+D A++ + + DG Y L+G K F++ +P + + ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGQHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345 Query: 426 EERSIARHYRE 436 + I R YR+ Sbjct: 346 GDYGIERFYRD 356 >gi|332716275|ref|YP_004443741.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325062960|gb|ADY66650.1| acyl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 375 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 26/261 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVE---GRVG 254 G LTE + G+D + + ++ ++ D Y + G K F++S + D I+ A + G+ G Sbjct: 120 GFALTEPQAGSDASNLKTKARRDGD-RYIIDGAKQFITSGKNGDVIIVFAITDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R++ K+G S+ T ++ F++ + +L + Sbjct: 179 ITAFIVPT-----DTPGYEVIRIEEKLGLHSSDTCQIAFTDMA--VPAELRLGEEGQGYR 231 Query: 313 KILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L L+ + +S V +A+A YAR R G +I+ + +AD+A I Sbjct: 232 IALANLEGGRIGISAQAVGMAQAAFEAARDYARERKAFGQAIIEHQAVAFRLADMATRIT 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L A + + EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 292 AARQLVLHAAALKEAGEPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMAD 344 Query: 428 RSIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 345 YPVERIYRDVRICQIYEGTSD 365 >gi|163761193|ref|ZP_02168269.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43] gi|162281532|gb|EDQ31827.1| acyl-CoA dehydrogenase-like protein [Hoeflea phototrophica DFL-43] Length = 399 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ K +DG Y L G K W +SP++D F++ A+ E G + Sbjct: 141 FGLTEPDAGSDPAGMKTRAIK-TDGGYVLRGSKMWISNSPIADVFVVWAKSEAH-GDKVR 198 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L ++ GP Sbjct: 199 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDDVEVGEDAILPNIQGMGGP------F 251 Query: 316 IYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S G+ + + +H AR+ RH L + ++ +AD+ +IA Sbjct: 252 GCLNRARYGISWGVMGAAEDCMHRARQYGLDRHQFNRPLAATQLFQKKLADMQTEIAMGL 311 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE + +A M + K C A + A + GG+G E + Sbjct: 312 QSSLRVGRLFDEGR-------FAPEMISVVKRNNCGKALDIARMARDMHGGNGIQIEYHV 364 Query: 431 ARH 433 RH Sbjct: 365 MRH 367 >gi|153833157|ref|ZP_01985824.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01] gi|148870587|gb|EDL69495.1| acyl-CoA dehydrogenase [Vibrio harveyi HY01] Length = 389 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 34/280 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ + + D Y ++G+K W + P +D ++ A+ + G Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDH-YLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGI 188 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F++ R E G + + +K+G R + T EL F + +LG+LN VE Sbjct: 189 TAFIIEREFE-----GFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRG---VE 240 Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + + +++ M+ + E + Y R G + + +++ +AD+ + Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMN 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA A + +A + D + ++AA + + ++A + +A++ +GG+GYI E Sbjct: 301 AAKAYVYTVAAACDRGECTRKDAAGVIL-------YSAELATQMSLDAIQLLGGNGYINE 353 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R R++ I G+G + + +L G LFE+ Sbjct: 354 YATGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|108802070|ref|YP_642267.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119871222|ref|YP_941174.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126438049|ref|YP_001073740.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108772489|gb|ABG11211.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119697311|gb|ABL94384.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126237849|gb|ABO01250.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 484 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 56/317 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P WAP+ F D A L ++E GG+D+ + + + Sbjct: 120 SAIGQAASPEQMLQWAPECFGTPGDLKLAA----------LAISEPEGGSDVRNLRTTAR 169 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + +++ ++ A V+ +G F+VP G GL Sbjct: 170 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDQELGHRGQALFIVP-----GGTPGLELV 223 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309 R +K+G R++ T EL+F LLG + + G Sbjct: 224 RKLDKMGCRASHTAELKFDGVRIPGDHLLGGEEKLEHKLAKAREAVEGARKSGSAALGTF 283 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E + ++ A ++ R +L YA RR G +ID + +AD+A I AA Sbjct: 284 EQTRPMV----AAQALGIARAALEYMTEYANRREAFGAPIIDNQGISFPLADLATQIDAA 339 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R S+ A + R ++K ++A A++ +GG GYI + Sbjct: 340 RLLTWR--ASWMAATG----VPFERGEGSMSKLAASEVAVKATERAIQTMGGWGYITDHP 393 Query: 430 IARHYRESPANSILLGS 446 + + YR++ +I G+ Sbjct: 394 VEKWYRDAKLYTIFEGT 410 >gi|254239977|ref|ZP_04933299.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192] gi|126193355|gb|EAZ57418.1| hypothetical protein PA2G_00611 [Pseudomonas aeruginosa 2192] Length = 384 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253 LTE G+D A++ + + DG Y L+G K F++ +P + + ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345 Query: 426 EERSIARHYRE 436 + I R YR+ Sbjct: 346 GDYGIERFYRD 356 >gi|205375177|ref|ZP_03227968.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus coahuilensis m4-4] Length = 594 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 37/314 (11%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 S+T + V + + P V +F + N P T + LTE G+D Sbjct: 109 SITHGAHVGIGSLPIV-------LFGNDNQKNNYLPALATGEKLAAYALTEPGSGSDALG 161 Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270 + + ++G Y L+G K W ++ +D F++ A+++G + F+V R G+ Sbjct: 162 AKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKIDGEQFSAFIVEREFP-----GV 216 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325 + K+G +S++T L + LLGD G V IL + +V Sbjct: 217 SVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGD--AGKGHVIAFNILNIGRYKLGVGAV 274 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + +L Y +R + + K ++ +A + A+ + +R F+E S Sbjct: 275 GATKRALEVTAEYTNQRQQFKTPISSFNLTKEKLSTMAAKLYASESSVYRTVGLFEERMS 334 Query: 386 R--SEE-----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R EE A YA I + K++ ++ V+ E ++ GG G+++E I R Sbjct: 335 RLTDEEVRDGKEVAKSIAEYA-IECSLNKFFATEVLDYVVDEGVQLHGGYGFMQEYEIER 393 Query: 433 HYRESPANSILLGS 446 YR+S N I G+ Sbjct: 394 MYRDSRINRIFEGT 407 >gi|299533479|ref|ZP_07046859.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] gi|298718536|gb|EFI59513.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni S44] Length = 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 44/314 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 ++ S ++A T + + W P++ S E + G+ +TE G+D+ A+ Sbjct: 96 TIASHYLLAYGTEEQKQR-WLPRLCSGE-------------LLAGIAMTEPSVGSDLKAM 141 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCYQ 273 ++ Q+ + Y ++G K F+++ + +++A G G V + LE + G Sbjct: 142 RTRAQRDGEH-YVINGSKTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRVG 200 Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 R KIG + T EL F + LLG G + M L Y + ++ VS Sbjct: 201 RRLGKIGQHISDTAELFFEDLRIPVSHLLGGTE-GQGFKQLMSQLPY-ERMLLGVSAAAA 258 Query: 331 SLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSFD 381 + Y ++R G + D + +A+ A A SF RL + Sbjct: 259 IEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSFVNDCIQRLLDG-- 314 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + EAAY + K+WC + V+ E ++ GG GY+EE IAR Y ++ Sbjct: 315 ---TLDNEAAY------MAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQK 365 Query: 442 ILLGSGNAMVLDVL 455 I G N ++ D++ Sbjct: 366 I-YGGANEIMKDLI 378 >gi|153836704|ref|ZP_01989371.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] gi|149750053|gb|EDM60798.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] Length = 389 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E G+D+ ++ + ++ D I+ L+G+K W + P + +++ A+ + + Sbjct: 130 LAMSEPGAGSDVVSMQLKAERKGD-IFLLNGNKMWITNGPDAHTYVVYAKTDPSQHSKGI 188 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G P Q+L +K+G R + T EL F N +LG+ N + Sbjct: 189 TAFIVER----GFPGFTQAQKL-DKLGMRGSNTCELVFQNCEVPAENILGEEN------Q 237 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 +K+L+ LD + ++G + + +A + Y R G + + +++ IAD+ Sbjct: 238 GVKVLMSGLDYERVVLAGGPLGIMQACMDIVVPYIHDRKQFGKSIGEFQLVQAKIADMYT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA A + +A + D ++ +++A A + + ++A + +A++ +GG+GY Sbjct: 298 QMNAAKAYVYAIAAACDRGETTRKDSAGAIL-------YSAELATKMALDAIQLLGGNGY 350 Query: 425 IEERSIARHYRESPANSILLGS 446 I E R R++ I G+ Sbjct: 351 INEFDTGRLLRDAKLYEIGAGT 372 >gi|118462334|ref|YP_884188.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118163621|gb|ABK64518.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 383 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 28/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCF 256 L +TE G+D+ + + + D + L+G K F+SS M+D ++ A+ + G G F Sbjct: 126 LAMTEPGAGSDLRGMRTTAHRDGDQ-WILNGQKTFISSGIMADVVVVAARTDPNGGSGAF 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E +P G R +KIG + T EL F + LLG + E ++ Sbjct: 185 SLF-VVERDTP-GFERGRKLDKIGLPAQDTAELYFRDAQVPGANLLGTVG------EGLR 236 Query: 314 ILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ L S++ R + Y ++R GG L D+ ++ +A++A +I Sbjct: 237 YLMSHLPRERLGVTAKSLATTRAIFDTTVEYCQQRMAFGGPLTDKQHIRFELAEMATEID 296 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A + +++ + + +AA K++ ++ VI ++ GG GY+ E Sbjct: 297 VAEAYVDKSVLAYNAGELTAVDAAKG-------KWYLSELQKRVIDRCLQLHGGYGYMTE 349 Query: 428 RSIARHYRESPANSILLGSGNAM 450 +AR Y ++ +I G+ M Sbjct: 350 YPVARAYLDTRIQTIYGGTTEIM 372 >gi|54024416|ref|YP_118658.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54015924|dbj|BAD57294.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 596 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 49/312 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 PM + + L+E + G+ +A I ++ + DG Y L G K ++S + + Sbjct: 152 PMVEGRFTGTMCLSEPQAGSSLADIVTRAEPQEDGTYRLFGSKMWISGGDHELTENIVHL 211 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF-- 291 +LA++ G + F+VP+ L D G+ N + L +K+G R L F Sbjct: 212 VLAKIPGGPAGTKGISLFVVPKYLVDADGSLGARNDVTLAGLNHKMGYRGTVNTVLNFGE 271 Query: 292 --------SNTFGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 + G+L+G+ L+ + + ++ + L + + +G SL YA Sbjct: 272 GRHTPGGAAGAVGYLVGEPHRGLSYMFHMMNEARLGVGLGATALGYTGYLKSL----RYA 327 Query: 340 RRRHVSGGILIDQPV-----------MKRAIADIALDIAAATALSFRLANSFDEAK---- 384 R R + P +KR + + A AL D A+ Sbjct: 328 RERQQGRAVTAKDPATPQIPIIEHADVKRMLLAQKSYVEGALALLLYCNRLVDLARTDPA 387 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 S E I+ + K W + A++ GG GY E + +HYR++ N I Sbjct: 388 SAREHTLLLEILTGVAKSWPSQWCLEANNLAIQVHGGYGYTREYDVEQHYRDNRLNPIHE 447 Query: 445 GSGNAMVLDVLN 456 G+ +D+L Sbjct: 448 GTHGIQGMDLLG 459 >gi|194292476|ref|YP_002008383.1| acyl CoA dehydrogenase oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|193226380|emb|CAQ72329.1| putative ACYL COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 398 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 46/313 (14%) Query: 156 VTSASMVALMTTPRVHKDW----APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 ++ AS+VA R W P+ REY P + + L+E G+D+ Sbjct: 72 MSVASIVA-----RAQGGWIMKSMPEEMRREYLPR----VVRGEFLNASALSEPDTGSDL 122 Query: 212 AAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPR 260 A+I+ + + D + L+G+K W + +D I+ A+ EG + CF++ + Sbjct: 123 ASISCRAELDGDE-WVLTGNKYWCTFADGADYLIVFARTSAPPSPDKRWEG-ISCFMIEK 180 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--L 318 G P G+ + KIG T EL G + N+ GP +L+ L Sbjct: 181 Q-RGGFPPGMTGSPIP-KIGYFGWKTFELALD---GVRVPKRNL-MGPEGKAFLLMAKGL 234 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A + + LA+ A+ Y+ R G + + ++ IA +A +I AA L Sbjct: 235 EGARAHTAARAIGLAQGALEDAVAYSLERRQFGMPIAEYQAIRFKIATMATEIEAARQLL 294 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + + N D + +EA+ + KY+ +MA V ++A++ GG+GY + + R+ Sbjct: 295 YFVCNEIDSGRRCDKEAS-------MVKYFASEMAERVTSQALQIFGGAGYTKLFPVERY 347 Query: 434 YRESPANSILLGS 446 +R++ I G+ Sbjct: 348 WRDARLTKIFEGT 360 >gi|169634306|ref|YP_001708042.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii SDF] gi|169153098|emb|CAP02168.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii] Length = 407 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + + DG Y +SG K F++S + +D + + + + + G Sbjct: 147 LAITEPGGGSDVAAL--QTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 204 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 205 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNF 263 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ V EA+ + ++R G LID V++ + D+A + + AL Sbjct: 264 NMERFFLGVVAYGYALVCYEEALEWVQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 323 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 324 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCAD-------AAVQTLGGMGFMRGTK 376 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 377 SERIYREVKVNMIGGGAEEIM 397 >gi|121604041|ref|YP_981370.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593010|gb|ABM36449.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 398 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 30/259 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D A++ ++ + + DG Y L G K W +SP++D F++ A Sbjct: 123 PKLATGEWVGCFGLTEPNHGSDPASMLTRAKPV-DGGYILKGAKMWITNSPIADVFVVWA 181 Query: 248 QVE---GRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 ++E G+VG R +LE G GL +++ K+ R++ T E+ + F LL Sbjct: 182 KLEDAGGKVGGQEAIRGFVLEKGM-KGLSAPKIEGKMSLRASITGEIVMDDVFVPSENLL 240 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----V 354 +++ GP L+ A ++ + AE + R++ + +P + Sbjct: 241 PNVSGLKGP------FGCLNKARYGIAWGALGAAEDCWFRARQYTMDRVQFGRPLAQTQL 294 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +++ +AD+ +I R+ DE ++ E M + K C + + Sbjct: 295 IQKKLADMQTEITLGLQACLRVGRLMDEDRAVPE-------MISLIKRNSCGKSLDIARM 347 Query: 415 AMECIGGSGYIEERSIARH 433 A + GG+G +E + RH Sbjct: 348 ARDMHGGNGIHDEYHVIRH 366 >gi|325281776|ref|YP_004254318.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] gi|324313585|gb|ADY34138.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] Length = 379 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD +A + D Y L+G K F++ + + +I++A + G + Sbjct: 123 FGLTEPNAGTDASAQQTMAVAEEDH-YVLNGSKIFITNAAYAHVYIVMAMTDKSQGTRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI- 314 + + G + + K+G R +AT EL F N G +LG P E KI Sbjct: 182 SAFIVERDFPGFSIGKKEKKMGIRGSATCELIFENCIVPKGNMLGK------PGEGFKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD M ++ + +A E I Y + R G + + +AD+ I AA Sbjct: 236 MKTLDGGRMGIASQALGIAQGAMDETIKYVKERKQFGRSIGQFQNTQFQLADLNAKIEAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A D S ++A A++ A T A V +A++ GG GY E Sbjct: 296 RLLVRTAAWKKDRKIPYSVDSARAKLFAAET-------AMEVTTKAVQFHGGYGYTREYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITEIYEGT 365 >gi|319650927|ref|ZP_08005062.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317397283|gb|EFV77986.1| acyl-CoA dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 402 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 35/275 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 PM + GLTE G+D + + + D Y L+G K F+++ ++D +++ A Sbjct: 113 PMAQGEKIGAYGLTEPGSGSDAGGMRTTARLEGD-HYVLNGSKIFITNGGIADIYVVFAL 171 Query: 249 VE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F+V E G + + K+G RS+ T E+ F +LG Sbjct: 172 TDPASKHKGTTAFIVESGFE-----GFSVGKKEKKLGIRSSPTTEIIFEECKVPVENVLG 226 Query: 301 DLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 ++ E KI ++ LD ++ V +A+ ++ YA+ R G + Q Sbjct: 227 NVG------EGFKIAMMTLDGGRNGIAAQAVGIAQGALDASVEYAKERQQFGKPIAAQQG 280 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A I A+ L+++ A E +E+A ++++A T A V + Sbjct: 281 IGFKLADMATSIEASRLLTYQAAWLESEGLPYGKESAMSKLLAGDT-------AMKVTTD 333 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS-GN 448 A++ GG GY ++ + R R++ I G+ GN Sbjct: 334 AVQIFGGYGYTKDYPVERFMRDAKITQIYEGTQGN 368 >gi|217423869|ref|ZP_03455369.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|217392932|gb|EEC32954.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] Length = 378 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW + VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYSGTNEIM 370 >gi|326203134|ref|ZP_08193000.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium papyrosolvens DSM 2782] gi|325986780|gb|EGD47610.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium papyrosolvens DSM 2782] Length = 383 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 23/264 (8%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 M K L+E G++ + + K D Y L+G K W ++D FI++A Sbjct: 112 MAKGEKLAAFALSEPDVGSNAKGVQTSYVKQGDK-YILNGRKKWITLGGIADVFIVIASE 170 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STG 307 +G++ FLV R S G+ +K + +++ E++ N + + NV G Sbjct: 171 QGKITAFLVER-----SFPGVSTSLIKGMLSGKASYISEIQLDNV---EVPEENVLGKVG 222 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 + + LD S++ V +A+ + Y+R R G L +++ I D Sbjct: 223 NAFEYVVATALDHGRYSIAWAGVGIAQEALDAMVTYSRNRTQFGEKLRSFQLVRGMIGDA 282 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 I AA AL R + R + + A + I KY+ K+A V +A++ GG+ Sbjct: 283 VTKIHAARALCIRA------GEMRQQRDSDAIVETTIAKYFTSKVAMEVANDAVQIHGGN 336 Query: 423 GYIEERSIARHYRESPANSILLGS 446 G + R +RE+ I+ G+ Sbjct: 337 GCCSGYPVERLFREARVLEIIEGT 360 >gi|300778441|ref|ZP_07088299.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] gi|300503951|gb|EFK35091.1| glutaryl-CoA dehydrogenase [Chryseobacterium gleum ATCC 35910] Length = 392 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P IG GLTE G+D ++ + + + D Y L+G K W + Sbjct: 115 FGSEEQKKKYLPKLAAGEMIGSFGLTEPNHGSDPGSMETNFKDMGDH-YLLNGAKMWITN 173 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 SP+ D ++ A+ EG+V +V R +E G NK R++ T EL F+N Sbjct: 174 SPLCDIAVVWAKNEEGKVQGLIVERGME-----GFTTPETHNKWSLRASKTGELVFNNVK 228 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347 LL + GP L L+SA +S + A A+ Y++ R G Sbjct: 229 VPKENLLPGVTGLKGP------LSCLNSARYGISWGVIGAAIDCYCTAVQYSKERKQFGK 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + + ++ +A+ +I A L +L N ++ K+ + + A K KM Sbjct: 283 PIGSYQLQQKKLAEFLTEITKAQLLCLQLGNLKNDHKATPAQISMA-------KRNNVKM 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + E+ + +GG G + E + RH Sbjct: 336 AIDIARESRQILGGMGIMGEFPMMRH 361 >gi|295836355|ref|ZP_06823288.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|295825977|gb|EFG64589.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 606 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 51/324 (15%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 SRE T PM + + L+E + G+ +A + ++ ++ DG Y L G+K ++S Sbjct: 150 SREQIDTYVRPMAEGRWFGTMCLSEPQAGSSLADVRTRAERAGDGTYRLFGNKMWISGGD 209 Query: 240 SD-----AFIMLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRS 283 + ++LA+ G + F+VP+ L D G+ N + L +K+G R Sbjct: 210 HELTENIVHLVLARTPGGPAGVKGLSLFVVPKYLVDEEGGTGARNDVVLAGLNHKMGYRG 269 Query: 284 NATVELEFS----------NTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMR 329 L F G L+G+ N + M +I + L + + +G Sbjct: 270 TTNTLLNFGEGAHRPGGEPGAVGHLVGEENKGLAYMFHMMNEARIGVGLGATALGYTGY- 328 Query: 330 VSLAEAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLAN 378 A+ YAR R + +I+ ++R + + A AL+ Sbjct: 329 ---LHALDYARTRPQGRPVAAKDPATAQVPIIEHTDVRRMLLAQKSYVEGALALTLYCGR 385 Query: 379 SFDEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 DE ++ E AA I+ P+ K W + + A++ GG GY E + + Sbjct: 386 LVDEQRTAPEPAAREAAGLLLDILTPVAKSWPSQWCLEANSLAIQVHGGYGYTREYDVEQ 445 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 YR++ N I G+ LD+L Sbjct: 446 FYRDNRLNPIHEGTHGIHGLDLLG 469 >gi|15667238|gb|AAL02422.1| isovaleryl-CoA dehydrogenase [Frankia sp. EuIK1] Length = 384 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV----- 253 + LTE GG+D+ A+ + G + + G Y ++G K W ++ S ++ + + V Sbjct: 121 MALTEPGGGSDLQAMRT-GARPAGGGYVINGSKTWITNARRSGLVALVCKTDPGVEPAHR 179 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------------FGFL 298 G ++ L+E G G R K+G + + EL F++ FG + Sbjct: 180 GMSIL--LVEKGP--GFEVSRDLPKLGYKGVESCELSFTDCRVPREALLGGVEGRGFGQM 235 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + L V L A + R + +A+ YA+ R G + + Sbjct: 236 MRGLEVGR-----------LQVAARATGVGRAAFDDALRYAQERESFGRPIWQHQSVGNH 284 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A + AA L A +D + EA A KY+C ++A V A+ Sbjct: 285 LADMATKLTAARQLLLHAARRYDTGERADLEAGMA-------KYFCSEVAMEVALSAIRV 337 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448 GG GY E + R++R++P +++G G Sbjct: 338 HGGYGYSTEFDVERYFRDAPL--MIVGEGT 365 >gi|15596828|ref|NP_250322.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107101063|ref|ZP_01364981.1| hypothetical protein PaerPA_01002093 [Pseudomonas aeruginosa PACS2] gi|254234731|ref|ZP_04928054.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719] gi|9947598|gb|AAG05020.1|AE004590_11 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126166662|gb|EAZ52173.1| hypothetical protein PACG_00600 [Pseudomonas aeruginosa C3719] Length = 384 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253 LTE G+D A++ + + DG Y L+G K F++ +P + + ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345 Query: 426 EERSIARHYRE 436 + I R YR+ Sbjct: 346 GDYGIERFYRD 356 >gi|284028112|ref|YP_003378043.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283807405|gb|ADB29244.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 373 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 15/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+A++ + ++ D + ++G K +++S F+ A G G + Sbjct: 116 LAITEPDGGSDVASLRTTARRDGD-HFVVNGAKTYITSGCRADFVTTAVRTGGPGAHGIS 174 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G P G R K+G + T EL F+ L+G + + Sbjct: 175 LLVIERGMP-GFVVSRKLEKLGWLCSDTAELSFAEVRVPVENLVGAEGSGFVQLAQNFVA 233 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A+ + +G + +L + + R R G LI + ++ + ++A I A Sbjct: 234 ERLTPAVQAYAGAQRALDLTVEWCRARETFGRPLISRQTVQHTLTEMARRIDVARVYVHD 293 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + + E +A+ A W C +A++ GG GY+ E + R YR Sbjct: 294 VVRRAEAGDDVIAEVCFAKNTAVEAGQWVCD-------QALQLHGGFGYLREAEVERQYR 346 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + LG G +L L Sbjct: 347 DQ--KILALGGGTTEILTGL 364 >gi|156976705|ref|YP_001447611.1| acyl-CoA dehydrogenase [Vibrio harveyi ATCC BAA-1116] gi|156528299|gb|ABU73384.1| hypothetical protein VIBHAR_05480 [Vibrio harveyi ATCC BAA-1116] Length = 389 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 34/280 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ + + D Y ++G+K W + P +D ++ A+ + G Sbjct: 130 LAMSEPNSGSDVVSMQLRAEDKGDH-YLMNGNKMWITNGPDADTLVVYAKTDPNGGSRGI 188 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 F++ R E G + + +K+G R + T EL F + +LG+LN VE Sbjct: 189 TAFIIEREFE-----GFSHAQKLDKLGMRGSNTCELVFQDCVVPKENVLGELNRG---VE 240 Query: 311 DMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + + +++ M+ + E + Y R G + + +++ +AD+ + Sbjct: 241 VLMSGLDYERVVLAAGPLGIMQACMDEVVPYVHDRKQFGKSIGEFQLVQGKLADMYSRMN 300 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA A + +A + D + ++AA + + ++A + +A++ +GG+GYI E Sbjct: 301 AAKAYVYTVAAACDRGECTRKDAAGVIL-------YSAELATQMSLDAIQLLGGNGYINE 353 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 + R R++ I G+G + + +L G LFE+ Sbjct: 354 YATGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|83747055|ref|ZP_00944100.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia solanacearum UW551] gi|207738492|ref|YP_002256885.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83726332|gb|EAP73465.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia solanacearum UW551] gi|206591860|emb|CAQ58766.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 400 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%) Query: 190 PMQK----TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 P Q+ T VA G L+E G+D+AA+ + DG Y L G K W + + Sbjct: 111 PAQRERYLTQVARGEAIAAFALSEPDAGSDVAALACAARVDGDG-YVLDGEKTWISNGGI 169 Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT 294 +D +++ A+ G + ++E G+P +R+ + + + + Sbjct: 170 ADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPHPLARLRFTGCRIPAAQR 229 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 G V+ ++ + + A ++ R +L EA+ A R + G+L D + Sbjct: 230 VGAAGEGFKVAMRTLDVFRTSV----AAAALGFARRALDEALARATTRRMFNGVLADFQL 285 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +A +A I +A L++R A D+ +S + EAA A++ A + A VI Sbjct: 286 TQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDA 338 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG G + E+ + R YRE A I G+ Sbjct: 339 AVQMWGGLGVVSEQPVERLYREIRALRIYEGA 370 >gi|91978156|ref|YP_570815.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] gi|91684612|gb|ABE40914.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] Length = 390 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G+K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGM 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLVEKGMKGFSTAQKLDKLGMRGSDTGELVFQDCEVPEENVLGEVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A + M+ L + Y R G + +++ +AD+ + + A+ A Sbjct: 250 ERAVL----AAGPLGIMQACLDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A C +A++ +GG+GYI + Sbjct: 306 YVYAVAKACDRGETTREDAAGAILFAAEKATQCA-------LDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|300790996|ref|YP_003771287.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299800510|gb|ADJ50885.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 611 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 60/329 (18%) Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K WA + R + T + LTE G+D+ A ++ K DG + + G Sbjct: 146 QKHWAQLMIDRAWGAT-------------MVLTEPDAGSDVGAGRTKATKQEDGSWHIDG 192 Query: 231 HKWFLSSPMSDA-----FIMLAQVEG----------RVGCFLVPRLLED------GSPNG 269 K F++S D ++LA+ EG + FLVP+ D G NG Sbjct: 193 VKRFITSAEHDMSENIMHLVLARPEGPGIETKPGTKGLSLFLVPKFHFDSKTGELGERNG 252 Query: 270 LCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIY--LDSAIM 323 +++K+G +++ T EL F G+LLG+ V G + +++ Y + Sbjct: 253 AYVTNVEHKMGIKASTTCELTFGQHGTPAKGWLLGE--VHDGIAQMFQVIEYARMMVGTK 310 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAAT 370 +++ + A+ YA+ R V G L + P ++R++ Sbjct: 311 AIATLSTGYLNALEYAKER-VQGADLPNMLNKAAPRVTITHHPDVRRSLMLQKAYAEGLR 369 Query: 371 ALSFRLANSFDEAKSRSEEAAYAR----IMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A+ D+ + + A ++ PI K + A + ++++ +GGSG+++ Sbjct: 370 AVYLYTASFQDQLWTGEGDQKLAHGVNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQ 429 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 + I ++ R++ +S+ G+ LD Sbjct: 430 DYPIEQYIRDAKIDSLYEGTTAIQSLDFF 458 >gi|325673563|ref|ZP_08153254.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325555584|gb|EGD25255.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 381 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258 +G+TE G+D+ AI + + D Y ++G K F+++ S I+LA + + + G V Sbjct: 126 IGMTEPGAGSDLKAIRTTAVRDGDH-YVVNGSKTFITNGSSADMIVLAVKTDPKAGARGV 184 Query: 259 PRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 L+ D P G R+ +K+G + T EL F + LLG+ G + Sbjct: 185 SLLIVDLRDCP-GFTVGRVLDKVGQHAADTSELSFVDVKVPVSNLLGEEGQGFGQLIAQL 243 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L A + M ++ E + Y + R G L + + A ++A ++ Sbjct: 244 VQERLIIAAQASGAMNRAVEETVAYVKSRQAFGHSLFE-------FQNTAFELAECQTIA 296 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D A + KYW V+ ++ GG GY+ E +AR Sbjct: 297 RTCEVFLDHCIQEHLRGELDAAEAAMAKYWLTDKQCEVVDRCVQLHGGYGYMREYLVARM 356 Query: 434 YRESPANSILLGSGNAM 450 Y ++ I G+ M Sbjct: 357 YEDARVQKIYAGANEVM 373 >gi|116327480|ref|YP_797200.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331906|ref|YP_801624.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120224|gb|ABJ78267.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125595|gb|ABJ76866.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 558 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 42/284 (14%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G+ +TE G+D+A ++ ++ ++G + ++G K W + ++ ++L + E Sbjct: 279 GIMVTEPNYGSDVAGVSVTAKQ-TNGGWVINGVKTWCTFAGYANLLLVLCRTESD----- 332 Query: 258 VPRLLEDG-------------------SPNGLCYQ-RLKNKIGNRSNATVELEFSNTF-- 295 P L G P G + + IG R + E+ F N F Sbjct: 333 -PSLKHKGLSILLAEKPSFTGHEFAYTQPEGGKIEGKAIGTIGYRGMHSFEVSFDNYFVP 391 Query: 296 --GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 L G+ G M+ + +A + M+ +L A+ YA+ R V + + Sbjct: 392 AENLLGGEAGRGKGFYFQMEGFAGGRIQTAARAHGVMQAALEAALRYAQDRSVFQKPIYE 451 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 + K IA +A+ + A+ + +A+ D + + E A + K++ K+A V Sbjct: 452 YNLTKYKIAKMAVILQASRQFANHVASLLDNHQGQME--------ATLIKFYASKVAEWV 503 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 EAM+ GG GY EE +++R++ ++ SI G+ M L V+ Sbjct: 504 TREAMQIHGGMGYAEEYAVSRYFVDARVFSIFEGAEEVMALRVI 547 >gi|108805284|ref|YP_645221.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108766527|gb|ABG05409.1| butyryl-CoA dehydrogenase [Rubrobacter xylanophilus DSM 9941] Length = 395 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 36/259 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AAI ++ +++ G Y +SGHK W + ++ I+ A+ V F+VP Sbjct: 125 LTEPEAGSDAAAIEARAERVEGG-YRISGHKQWITNGRVAGTMILFARAPEGVTAFIVPM 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDMK 313 E G+ + K+G S T ++ F G L V+ G Sbjct: 184 DAE-----GVSLGKHARKMGVISATTDDVLLDGVFVPEEDRLGEEGKGLRVALGT----- 233 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LD + ++G + +AE A +A RR G + + + +AD+ + I A Sbjct: 234 ----LDPGRIGIAGQALGIAEAAFRCAAEHAVRRRAFGRPIAEHQAISFKLADMQVKIRA 289 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++ A D +E A A K + ++A V EA++ +GG GY+++ Sbjct: 290 ARLLAYEAAWMKDRGMRVTEAGARA-------KLYASQVANEVAYEAVQILGGRGYMKDE 342 Query: 429 S-IARHYRESPANSILLGS 446 S + R YR++ I G+ Sbjct: 343 SPVERLYRDARVTEIYEGT 361 >gi|320589507|gb|EFX01968.1| isovaleryl-dehydrogenase [Grosmannia clavigera kw1407] Length = 834 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 17/257 (6%) Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 L ++E G+D+ ++ T+ + + G Y L G K W + P + ++ A+ G Sbjct: 171 LAMSETGAGSDVVSMRTTAREAVQHGRNGYVLRGSKMWITNGPDAGLIVVYAKTRPDAGS 230 Query: 256 FLVPRLLEDGS--PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 + L D + P G R +K+G R + T EL F + F L G + Sbjct: 231 KGITAFLVDTAARPPGFACARKLDKMGMRGSNTGELVFDDVFVPCSHVLGTVDGGARVLM 290 Query: 314 ILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L+ ++S M+ +L A+ Y +RH G + +++ +AD+ + A+ Sbjct: 291 AGLDLERLVLSAGPLGLMQAALDLALPYTHQRHQFGVPVASFQLVQGRLADMHTKLQASR 350 Query: 371 ALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ A D++ R+E+ A T + + A V + ++ +GG GY+EE Sbjct: 351 AYTYATARRVDDSSDIRTEDCAG-------TILYAAERATEVALDCIQLLGGMGYMEEMP 403 Query: 430 IARHYRESPANSILLGS 446 +R R++ I G+ Sbjct: 404 ASRILRDAKLYEIGAGT 420 >gi|291455403|ref|ZP_06594793.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291358352|gb|EFE85254.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 36/288 (12%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQ 217 + +A T +W P++ + E A+G LTE G+D +++++ Sbjct: 97 SKTIATHGTDEQKAEWLPRLAAGE--------------ALGCFALTEPGTGSDAGSVSTR 142 Query: 218 GQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRL 275 ++ G + + G K F+++ ++D ++ A+ E + FLVP SP G + Sbjct: 143 ARR-DGGDWVIDGAKIFITNGTVADVALVFARTGEKGLTAFLVP----TDSP-GFTATEI 196 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE 334 K+G R AT EL G + D + I L L +SV+ V LA+ Sbjct: 197 HGKLGLRGQATAELTLE---GVRVPDTARLGEEGRGLGIALGTLSRGRISVAAGAVGLAQ 253 Query: 335 -----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 A+ YA+ R G + +++ +AD +D+ A L+ ++A D S E Sbjct: 254 GAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLLTHQVARMADAGASPKEY 313 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 A A + KY + A V ++ GG GYI+E + ++ R++ Sbjct: 314 ATDA----SVAKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGKYLRDA 357 >gi|256394462|ref|YP_003116026.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256360688|gb|ACU74185.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 382 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 21/253 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E + G+D AA+T++ + D Y ++G K W S +D + ++ + + Sbjct: 128 LSEPQSGSDAAALTTRAVRSGD-EYAVTGTKAWITHSGQADFYTLMVRTSDDGAKGISAL 186 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313 L E+G+P GL + + + K+G R + T ++ LLG +++ +E + Sbjct: 187 LAENGTP-GLGFGKPEKKMGMRGSVTAQVLLDGARVPADRLLGAEGQGFSIALSALEAGR 245 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A +V + +L A+ YA R G + + + +AD+A +A A Sbjct: 246 LGI----AACAVGVAQAALDAAVEYATSRRQFGHAIAEFQGVGFMLADMATAVAVGRAAY 301 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A D EAA A++ +C MA V +A++ GG GY + + R+ Sbjct: 302 LAAARRRDAGLPYGTEAAMAKL-------FCTDMAMKVTTDAVQVFGGYGYTADFPVERY 354 Query: 434 YRESPANSILLGS 446 RE+ I+ G+ Sbjct: 355 MREAKVLQIVEGT 367 >gi|107025761|ref|YP_623272.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116693057|ref|YP_838590.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105895135|gb|ABF78299.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116651057|gb|ABK11697.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 377 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A+ I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|265993326|ref|ZP_06105883.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|262764196|gb|EEZ10228.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether] Length = 318 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%) Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272 + DG Y L+G K F++ +P++D F ++A+ V+G G F+V R SP GL Sbjct: 75 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 129 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327 + K+G + T + F N L+G + G MK+L L A +S Sbjct: 130 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 188 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 LA+ + YA R G + D +++ +AD +I AA + A D ++ S Sbjct: 189 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 248 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 EA+ A K + +M V ++ GG+GY+ E +I R YR+ Sbjct: 249 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 290 >gi|198432777|ref|XP_002126363.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member 8 [Ciona intestinalis] Length = 422 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 87/381 (22%), Positives = 157/381 (41%), Gaps = 53/381 (13%) Query: 89 PGGERWDKVEFHPAWHALLRRSIH---DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 P ++WD+ P +++RS + GL+C D + R A + Sbjct: 70 PNMQKWDEQGHFPV--DVIKRSANLGFGGLYC---DEKYGGTGLS-----RLATSVIFEA 119 Query: 146 LEAGHLMSPSVTSA-SMVALMT----TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 L G + + + S +MVA M + W P + M+K S Sbjct: 120 LSTGCVSTTAYISIHNMVAWMVDSFGNEKQKNKWLPSL----------TAMEKLSSYC-- 167 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D AA+ + ++ D Y L+G K F+S + +SD ++++ + G+ G + Sbjct: 168 -LTEPGSGSDAAALITSAKQDGDN-YILNGSKSFISGATVSDVYLVMVRT-GKEGPKGIS 224 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312 LL + + GL + + + K+G +S T + F N G N++ + Sbjct: 225 TLLVEKNTPGLTFGKSEVKLGWKSQPTGIVNFEDCVVPVENRIGPAGSGFNIAMKGLNGG 284 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I + S+ G + S A + R G L+ ++ +A++A I ++ L Sbjct: 285 RINI----SSTSLGGAQKSFEHARDHLSVRKAFGKELLHNQYLQYRMAEMATKITSSRFL 340 Query: 373 SFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A + DE + A A++ A + C A++ GG GY+ E + Sbjct: 341 VRQAAQAMDEKHPNAPALCAMAKLHATDNCFDVCN-------SALQMFGGYGYLCEYPVQ 393 Query: 432 RHYRESPANSILLGSGNAMVL 452 + R+ N IL G+ M L Sbjct: 394 QFVRDVRVNQILEGTNEIMRL 414 >gi|330752055|emb|CBL80566.1| acyl-CoA dehydrogenase [uncultured Flavobacteria bacterium] gi|330752176|emb|CBL87135.1| butyryl-CoA dehydrogenase [uncultured Flavobacteria bacterium] Length = 381 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 35/289 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W F E T + IG L+E G+D + ++ + D Y L+G K Sbjct: 96 WGLDTFGNEAQKTKYLTKLASGEQIGAFCLSEPEAGSDATSQSTTAIDMGDH-YLLNGTK 154 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + + +++AQ G + L+ + +G + ++K+G R Sbjct: 155 NWITNGGTCEIALVIAQTNREKGHRGINVLIVEKGMDGFIVGKKEDKLGIRG-------- 206 Query: 292 SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIH 337 S+T L D+ V P E+ + A+ ++SG R+ +A A+ Sbjct: 207 SDTHTLLFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAQGALDLALA 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y++ R G + + + +AD+ + + A L ++ A DE K+ +E+A A++ A Sbjct: 264 YSKERTTFGKPIHEHQAIAFKLADMEMKVEQARMLVYKAAWLKDEGKNYDKESAMAKLGA 323 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W V EA++ GG G+++E + R R++ I G+ Sbjct: 324 SEAAMW-------VATEAVQVHGGYGFVKEYHVERLMRDAKITQIYEGT 365 >gi|312197996|ref|YP_004018057.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311229332|gb|ADP82187.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 391 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 13/266 (4%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 P T AIG L +TE G+D+ I + + +G + LSG K F+++ ++D I+ A Sbjct: 115 PRLCTGEAIGALAMTEPGAGSDLQGIRTSAVRDGEG-WRLSGSKTFITNGILADVVIVFA 173 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + + G L + + +G R K+G R N T EL F + LLG Sbjct: 174 RTDPEAGSRGYSLFLVESAADGFRRGRKLEKLGLRGNDTAELFFDDIVLPSTALLGTEGR 233 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + L L S + R + + Y R G + D + +A+IA Sbjct: 234 GLAHLMERLPLERLSIGATSYAFARAAYDWTVEYCFGRRAFGQPIGDFQNTRFTLAEIAT 293 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A A R + + + +AA A K+W + V+ ++ GG G+ Sbjct: 294 ELDVAQAYHDRAVLALGDGSLTAVDAAKA-------KWWLTDLQNRVVDRCVQLHGGYGF 346 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E I R Y ++ I G+ M Sbjct: 347 MWEYPITRAYADARIQPIFGGTNEIM 372 >gi|40556687|gb|AAR87758.1| ZmaI [Bacillus cereus] Length = 397 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 18/253 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G + C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 VP+ G+ +++ +G ++ E+EF+N F ++G + + + Sbjct: 183 VPK-----DSVGVNVTHIRDMLGFKAAYLAEIEFNNVEIPFENIIGRPGFAFTYLAPYAL 237 Query: 315 LI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A ++ +R L ++ R G LID ++ + D+ +D+ A+ LS Sbjct: 238 EFGRISIAFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVDLEASILLS 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +E ++ + E +IM I KY+ + A++ +G G + SI+R Sbjct: 298 LEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCNDNYSISRC 351 Query: 434 YRESPANSILLGS 446 +R+S I+ GS Sbjct: 352 FRDSKTMEIVEGS 364 >gi|41406130|ref|NP_958966.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466848|ref|YP_879339.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254773084|ref|ZP_05214600.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|41394478|gb|AAS02349.1| FadE25_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168135|gb|ABK69032.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 460 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 56/329 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P +WAP+ F D A L ++E GG+D+ + ++ + Sbjct: 96 SAIGQAASPEQMLEWAPECFGTPGDLKLAA----------LAISEPEGGSDVRNLRTRAR 145 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + +++ ++ A V+ +G F+VP G+P GL Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVP----GGTP-GLKMV 199 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309 R +K+G R++ T EL F LLG + + G Sbjct: 200 RKLDKLGCRASHTAELLFEGVRVPAANLLGGQEKLEHKLAKAREVVAGGKRSGSATLGTF 259 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E + ++ A ++ R +L A YA R G +ID + +A++A I AA Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATSYATEREAFGAPIIDNQGIAFPLAELATQIDAA 315 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R S+ A + + R ++K ++A A++ +GG GYI + Sbjct: 316 RLLTWR--ASWMAANN----VPFERGEGSMSKMAASEVAVKATERAVQTLGGWGYITDHP 369 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + + YR++ +I G+ + V N L Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVVSNAL 398 >gi|311693798|gb|ADP96671.1| acyl-CoA dehydrogenase domain protein [marine bacterium HP15] Length = 388 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 39/280 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVG 254 LTE G+D A++ ++ + D Y ++G K F+S + +D +++A+ + Sbjct: 124 LTEPGAGSDAASLRTKAVRDGDS-YVINGSKVFISGAGATDILVLMARTGAPDSGYKGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307 F++P +G+ Y + + K+G S T V + SN G ++ Sbjct: 183 TFVIP-----ADADGISYGKNEEKMGWHSQPTRMISLENVRIPASNRVGDEGDGFAIAMK 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ ++ I A S+ G + +L A +Y R G L ++ +AD+A ++ Sbjct: 238 GLDGGRLNI----ATCSLGGAQAALLRARNYMHEREQFGKPLAAFQALQFKLADMATNLV 293 Query: 368 AATAL----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA + +F+L N+ EA + + K + V+ EA++ GG G Sbjct: 294 AARQMVRLGAFKLDNADPEAT----------LHCAMAKRFATDACFEVVNEALQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLEKGT 462 YI E + R+ R+ + IL G+ M L V LL+ G Sbjct: 344 YIREYPLERYLRDLRVHQILEGTNEIMRLIVARRLLDDGV 383 >gi|302531198|ref|ZP_07283540.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302440093|gb|EFL11909.1| acyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 614 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 56/304 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEG----- 251 LTE G+D+ A ++ K DG + + G K F++S +D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVKQEDGSWHIDGVKRFITSAENDMVENIMHLVLARPEGPGIET 223 Query: 252 -----RVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFG 296 + FLVP+ D G NG +++K+G + + T EL F G Sbjct: 224 KPGTKGLSLFLVPKFHFDSKTGELGERNGAFVTNIEHKMGIKVSTTCELTFGQHGTPAKG 283 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--- 351 +LLG+ V G + +++ Y + +++ + A+ YA+ R V G L + Sbjct: 284 WLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKER-VQGADLPNMLN 340 Query: 352 ----------QPVMKRAIADIALDIAAATAL--------SFRLANSFDEAKSRSEEAAYA 393 P ++R+ + L A A L SF+ E S + A++ Sbjct: 341 KTAPRVTITHHPDVRRS---LMLQKAYAEGLRAIYLYTASFQDQLWTGEGDEASLKLAHS 397 Query: 394 --RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ PI K + A + ++++ +GGSG++++ I ++ R++ +S+ G+ Sbjct: 398 VNDLLLPIVKGVGSERATEQLVQSLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQS 457 Query: 452 LDVL 455 LD Sbjct: 458 LDFF 461 >gi|218295442|ref|ZP_03496255.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218244074|gb|EED10600.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 381 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA+ ++ + D Y L+G K W + ++ ++ A Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALKTRAVRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 172 Query: 249 VEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294 + + +V ++E G+P G ++ K+G R++ T EL F + Sbjct: 173 LNPELRHKGVVALVVEKGTP-GFRAVKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 231 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 F + LN + PV A SV R +L EA YA+ R G + + Sbjct: 232 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEAKKYAKEREAFGRPIAEFQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+ + I A A ++ A D+ + +A I K + ++A Sbjct: 281 AIQFKLADMLMGIETARAYTYYAAWLADQGLPHAHASA-------IAKAYASEVAFEAAN 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY+ E + + R+ N I G+ Sbjct: 334 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 366 >gi|225009980|ref|ZP_03700452.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium MS024-3C] gi|225005459|gb|EEG43409.1| acyl-CoA dehydrogenase domain protein [Flavobacteria bacterium MS024-3C] Length = 380 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + ++ K D Y ++G K W + + ++++AQ + + G + Sbjct: 125 LSEPEAGSDATSQKTRAVKKGD-YYEITGTKNWITNGSSASIYLVIAQTDPKKGSKGISA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 + + G +NK+G RS+ T L+F+ FGF L +S G Sbjct: 184 FIVEKESPGFVIGPKENKLGIRSSDTHSLQFNQVKVHEENRIGEEGFGFTLAMKTLSGGR 243 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I + + + ++ L A++YA++R G + + +A + I A Sbjct: 244 -------IGIAAQALGIAAGAYEL--ALNYAKQRETFGKPISQHQAIAFKLAQMHTKIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A D+ + A A++ + ++A V EA++ GG+G+++E Sbjct: 295 ARHLVYKAAWEKDQGLNYDLSGAMAKL-------YASEVAMEVSVEAVQVFGGNGFVKEY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 HVERLMRDAKITQIYEGT 365 >gi|161620515|ref|YP_001594401.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|163844613|ref|YP_001622268.1| hypothetical protein BSUIS_B0448 [Brucella suis ATCC 23445] gi|254702839|ref|ZP_05164667.1| hypothetical protein Bsuib36_02649 [Brucella suis bv. 3 str. 686] gi|260568249|ref|ZP_05838718.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261753440|ref|ZP_05997149.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|161337326|gb|ABX63630.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|163675336|gb|ABY39446.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|260154914|gb|EEW89995.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261743193|gb|EEY31119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 375 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 28/266 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G +++K+G S+ T L F+N + L E Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEG---EGY 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI L L+ + ++ V +A A YAR R G +I+ + +AD+A I Sbjct: 231 KIALANLEGGRIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 291 ETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYLA 343 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 344 DYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|126643031|ref|YP_001086015.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 361 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCF 256 L +TE GG+D+AA+ Q + I DG Y +SG K F++S + +D + + + + + G Sbjct: 101 LAITEPGGGSDVAAL--QTKAIRDGDNYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAE 158 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 159 GISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGQENAGFKVIMNNF 217 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +++ + EA+ +A++R G LID V++ + D+A + + AL Sbjct: 218 NMERFFLGVVAYGYALICYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALL 277 Query: 374 FRLANSFDEAKSRSEE----AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + K + E + + +A T +C A++ +GG G++ Sbjct: 278 EETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTK 330 Query: 430 IARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 331 SERIYREVKVNMIGGGAEEIM 351 >gi|313498510|gb|ADR59876.1| Acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida BIRD-1] Length = 589 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + A + LTE GTD+ I ++ + +DG +SG K F++ D + Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP+ L + G+ N + +++K+G +++AT + F Sbjct: 214 VLAKLPDAPAGAKGISLFLVPKFLLEADGRLGARNAVHCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352 G+L+G+ N + M L I + S A YA R S Q Sbjct: 274 AIGYLVGEPNKGLAAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 333 Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 P++ R + + A +A ++A R + Sbjct: 334 HDKVADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|326317978|ref|YP_004235650.1| glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374814|gb|ADX47083.1| Glutaryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 399 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 23/265 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K + G Y L G K W + Sbjct: 115 FGTEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGSMATRAYKTAGG-YKLKGSKMWITN 173 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 174 SPIADVFVVWAKEVSESGAVGPIRGFVLEKGM-QGLTAPAIHGKVGLRASITGEIVMDDV 232 Query: 295 FGFLLGDLNVSTGPVEDMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI 348 F + + N V+ +K L+SA ++ + AE A Y R G Sbjct: 233 F---VPEENAFP-EVQGLKGPFTCLNSARYGIAWGALGAAEFCWHTARQYTLDRKQFGRP 288 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L ++++ +AD+ +IA RL DE + E + I K C A Sbjct: 289 LAANQLIQKKLADMQTEIAIGLQACLRLGRMKDEGTAAVEATS-------IIKRNSCGKA 341 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + +GG+G +E +ARH Sbjct: 342 LDIARMARDMMGGNGISDEFGVARH 366 >gi|296134748|ref|YP_003641990.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] gi|295794870|gb|ADG29660.1| acyl-CoA dehydrogenase domain protein [Thiomonas intermedia K12] Length = 393 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++++ + + G Y L+G+K W +SP++D F++ A+ + G + F+ Sbjct: 138 FGLTEPDHGSDPGGMSTRARAVPGG-YALNGNKMWISNSPIADVFVVWAKDDAGEIRGFV 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + D GL + K+G R++ T E+ F + N Sbjct: 197 L-----DKGAKGLSAPAVHGKVGLRTSITGEIVMDQVF---CPEENAFPTVCGLKGPFTC 248 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L+SA ++ + AE A Y R G L ++++ +AD+A DI+ Sbjct: 249 LNSARYGIAWGAMGAAEDCYARARQYVLDRKQFGRPLAANQLVQKKLADMATDISLGLQG 308 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 RL DE + E + + K C A + A + +GG+G +E +AR Sbjct: 309 VLRLGRMKDEGTAAPE-------VTSLLKRNNCGKALDIARTARDMLGGNGISDEFGVAR 361 Query: 433 H 433 H Sbjct: 362 H 362 >gi|256043141|ref|ZP_05446083.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis bv. 1 str. Rev.1] gi|260564362|ref|ZP_05834847.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265989572|ref|ZP_06102129.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|260152005|gb|EEW87098.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|263000241|gb|EEZ12931.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] Length = 380 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%) Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272 + DG Y L+G K F++ +P++D F ++A+ V+G G F+V R SP GL Sbjct: 137 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 191 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327 + K+G + T + F N L+G + G MK+L L A +S Sbjct: 192 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 250 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 LA+ + YA R G + D +++ +AD +I AA + A D ++ S Sbjct: 251 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 310 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 EA+ A K + +M V ++ GG+GY+ E +I R YR+ Sbjct: 311 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 352 >gi|320592978|gb|EFX05387.1| acyl-CoA dehydrogenase [Grosmannia clavigera kw1407] Length = 398 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 26/304 (8%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 VH +F + P K P T L+E G+D A+ ++ + G + Sbjct: 104 VHNTLVNTVFIKYASPALKKRILPKLATESVGSFCLSEPVSGSDAFALATRATESESG-F 162 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 +SG K W +S +D F++ A ++ G + L + G + + K+G R+++ Sbjct: 163 RISGSKMWITNSMEADVFVVFANLDPAKGYRGITAFLVEKGTKGFSIAKKEKKLGIRASS 222 Query: 286 TVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIH 337 T + F + LLG+ + G + + +I I ++G+ + E A+ Sbjct: 223 TCVINFDDVDIPKENLLGERGHGYKYAIGLLNEGRIGI-----AAQMTGLALGAWENAVK 277 Query: 338 YARRRHVSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y G LI + M+ A ++IAAA AL + + + + ++AA A++ Sbjct: 278 YCWNDRKQFGQLIGEFQGMQHQFAQSYVEIAAARALVYNASRKKEAGEDFVKDAAMAKL- 336 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + ++A V + A+E +GG G++ E +++R+S +I G+ N + + Sbjct: 337 ------YASQVAGRVSSLAVEWMGGMGFVREGLAEKYFRDSKIGAIYEGTSNIQLNTIAK 390 Query: 457 LLEK 460 LL+K Sbjct: 391 LLQK 394 >gi|311031801|ref|ZP_07709891.1| acyl-CoA dehydrogenase domain-containing protein [Bacillus sp. m3-13] Length = 594 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 47/341 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + +G Y L+G K W ++ +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTAKLNDEGTHYVLNGEKQWITNAGFADVFVVYAKVDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 R G+ + K+G + ++T L + LLG+ + G V IL Sbjct: 210 EREF-----GGVSTGPEEKKMGIKGSSTRTLVLEDALVPKENLLGE--IGRGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 A+ +V G + + + YA +R + +++ +A++A+ A + Sbjct: 263 NIGRYKLAVGTVGGSKRGIELSATYANQRQQFKTPIAKFSLIQEKLANMAVKTYATESSV 322 Query: 374 FRLANSFDEAKSR---SEE----------AAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +R F+++ R EE + YA I + K + + V+ EA++ G Sbjct: 323 YRTVGLFEDSMGRLTKEEEKDPNAVAKAVSEYA-IECSLNKVFGSETLDYVVDEAVQIHG 381 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468 G G++ E + R YR+S N I G+ L V L L++K +L E+L Sbjct: 382 GYGFMAEYEVERMYRDSRINRIFEGTNEINRLLVPGTYLRKALKGELPLIQKAQSLQEEL 441 Query: 469 FSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 + +++G +L L K K +A +T +A Sbjct: 442 MMLMPEEVGDG------VLEQEKYLVKNAKKIAILMTGLVA 476 >gi|23098269|ref|NP_691735.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22776494|dbj|BAC12770.1| butyryl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 565 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 28/262 (10%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D +A+ T+ + + ++G K W ++ +++ +++ A E + F+V Sbjct: 160 LTEPNAGSDALASKTTAKWNDENQTWTINGEKQWITNAHIANVYVVFANTEQGITAFIVE 219 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 R + G+ + K+G + ++T VEL+ + G V G + Sbjct: 220 RTFK-----GVSIGPEEKKLGIKGSSTATLILEDVELDSAQVLG------EVGKGHRIAL 268 Query: 313 KIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 IL L A ++ + +L AI Y + R G +++ +++ IA++A I + Sbjct: 269 NILNLARLKIAFSNIGMSKQALEFAIKYGKDRQQFGKNIVEFGLIQEKIANMATAIYKSE 328 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMA------PITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ A+ D + + + +A I K + ++ EA++ GG GY Sbjct: 329 CTAYYTASLLDRQLIDNGKENFISSLARFSMDCSINKVLASESLDMIVDEALQIHGGYGY 388 Query: 425 IEERSIARHYRESPANSILLGS 446 ++E + R YR+S N + G+ Sbjct: 389 MQEYEVERLYRDSRINRLFEGT 410 >gi|325001281|ref|ZP_08122393.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length = 387 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 37/270 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR 252 G+ LTE GTD+ I + ++ D Y ++G K W ++ +D +L + + Sbjct: 121 GIALTEPGAGTDLQGIRTTARRDGDD-YVVNGTKMWITNARHADPLPVLVKTDPSAEPAH 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GP 308 G ++ L+E SP G K+G + + E+ +L D+ V G Sbjct: 180 KGMSIL--LVEADSP-GFEVTADIGKLGYKGTESCEV--------VLTDVRVPASQLLGG 228 Query: 309 VED---MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIA 360 VE + L L++ ++++ V +A EA++YAR R G + + +++ +A Sbjct: 229 VEGRGLQQALSSLETGRINIAARSVGIAQRAYDEALNYARERTAFGRPIGEFQAVEQRLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 IA+ + AA +++ A+ D+ E+ A+I A C ++M G Sbjct: 289 QIAVRLQAARLMTYWAASRMDDGVRMDTESGMAKIFASEQALECA-------IDSMRIHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY E I R YR++P SI G+ + + Sbjct: 342 GYGYSTEFEIERLYRDAPLMSIGEGTNDVL 371 >gi|193077827|gb|ABO12702.2| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii ATCC 17978] Length = 381 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V + ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|154331159|ref|XP_001562019.1| acyl-coenzyme a dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059341|emb|CAM37043.1| putative acyl-coenzyme a dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 511 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 17/249 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 +TE GG+D+A + + +K D + ++G K W + ++ + +LA+ EG F+V Sbjct: 259 VTEPTGGSDVAGLKTTARKEGD-RWVINGSKMWITNGGVASWYFVLARSEGGYTGFIV-- 315 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV-STGPVEDMKILIYLD 319 D + G+ + +G R + T + F N + G M++ + Sbjct: 316 ---DANAPGVTRGEKEVMLGQRCSDTRGITFENVVVPEENVVGEPGKGFQVAMRVFDFTR 372 Query: 320 S--AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 S AI +V R + EA YAR R G + + +A++A + A +++R Sbjct: 373 SSVAIAAVGLSRRATDEATRYARERVTMGKPIAQHQAVAFMLAEMAAGVEACRLMTYRAG 432 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ + + A+ A++MA +A A++ GG+GY + + YR+ Sbjct: 433 WDTDQGRRNTYYASCAKMMA-------ANLAEKCATNAVQIFGGNGYNTGYPVEKLYRDC 485 Query: 438 PANSILLGS 446 SI G+ Sbjct: 486 KIFSIYEGT 494 >gi|111021608|ref|YP_704580.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821138|gb|ABG96422.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 383 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 29/294 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W P++ S E + G LTE G+DIA++ + ++ DG + Sbjct: 101 TEEQKRRWLPRLASGE-------------LLAGFALTEPDAGSDIASMRTTARREDDG-W 146 Query: 227 CLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 LSG K ++S+ +D ++ A+ + G F++P+ G+P G+ Y ++K+G Sbjct: 147 HLSGSKTYISNAKEADLVVLFAKTDPSAGFRGITAFVLPQ----GTP-GVSYSEPQDKLG 201 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340 RS T + + L D V T L L+ A + V+ M +A Sbjct: 202 IRSAPTYTVFLDDVV--LPPDAVVGTEGRGGNIALTALNRARIDVAAMANGIALRAWELG 259 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R + + P+ + + L A ++ R+ + D A + A R A ++ Sbjct: 260 RSYAAERKQFGHPIAEFQAIQLLLGACDAQLVASRV--TADWAADVKDAGADLRRAASVS 317 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 KY + +++ + ++ GG+G++ E I R YR+ I G+ +L + Sbjct: 318 KYVATEACFSIVDQTVQIHGGAGFMRESEIERLYRDCRILRIFEGTSQIQLLTI 371 >gi|288541495|gb|ADC45567.1| acyl-CoA dehydrogenase [Streptomyces nanchangensis] Length = 387 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 20/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCF 256 + LTE GG+D+ A+ + ++ +DG Y +SG K W +S S +L + + Sbjct: 124 MALTEPGGGSDLQAMRTVARRAADG-YVVSGSKTWITNSRRSQLIALLCKTDPDATPAHQ 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMK 313 V LL + P GL R K+G + + EL F +LG + G + MK Sbjct: 183 GVSILLAEHGP-GLTVSRDLPKLGYKGVESCELSFDGYRAAADAVLGGVE-GKGFAQMMK 240 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L A ++ R + +A+ YA+ R G + + +AD+A + AA Sbjct: 241 GLETGRLQVAARALGVGRAAFEDALAYAQERESFGTPIWKHQSIGNYLADMATSLTAARQ 300 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+ A D + EA A++ A T A + A+ GG GY E + Sbjct: 301 LTLYAAREADAGRRVDMEAGMAKLFASET-------AMQIALNAVRIHGGYGYSTEFDVE 353 Query: 432 RHYRESPANSILLGSGN 448 R++R++P +++G G Sbjct: 354 RYFRDAPL--MIVGEGT 368 >gi|239945375|ref|ZP_04697312.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239991829|ref|ZP_04712493.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] Length = 384 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + D Y L+G K F+S + S +I+LA+ G G + Sbjct: 127 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLART-GEDGPRGISA 184 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 + + GL + + K+G + T V + G G ++ + + Sbjct: 185 FVVERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGR 244 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G + +L ++ + R GG L+D ++ +AD+A ++AAA AL Sbjct: 245 LGI----AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALV 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + D A A + + K++ +V A++ GG GY+ E I + Sbjct: 301 RQAAEALD------RNTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKI 354 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 355 VRDLRVHQILEGTNEIM 371 >gi|156402507|ref|XP_001639632.1| predicted protein [Nematostella vectensis] gi|156226761|gb|EDO47569.1| predicted protein [Nematostella vectensis] Length = 419 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVG 254 L+E G+D A ++ + DG Y L+G K W + S+A ++ A + + Sbjct: 161 LSEPDNGSDAGA--AKTTAVLDGDHYVLNGTKAWITNGYESEAAVVFATTDRSKKHKGIS 218 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 FLVP+ GL ++K+G R+ +T L F + + N+ P KI Sbjct: 219 AFLVPK-----PTPGLTLGNKEDKLGIRATSTCYLVFEDC---RIPKENLLGEPGYGFKI 270 Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD+ + ++G + +A+A + YA +R + ++ +ADIA + A Sbjct: 271 AMQTLDAGRIGIAGQALGIAQAALDCAVDYADKRMAFNQKISKLQTIQMKLADIATQLEA 330 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+++ A D + ++EAA A++ A A ++++ +GG GY+ + Sbjct: 331 ARLLTWKAAAIKDAGMNYTKEAAMAKLAASEA-------ATFAAHQSIQILGGMGYVTDM 383 Query: 429 SIARHYRESPANSILLGS 446 RHYR++ I G+ Sbjct: 384 PAERHYRDARITEIYEGT 401 >gi|159043846|ref|YP_001532640.1| acyl-CoA dehydrogenase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911606|gb|ABV93039.1| acyl-CoA dehydrogenase domain protein [Dinoroseobacter shibae DFL 12] Length = 387 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 116/256 (45%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + +K +D Y L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVGMKLRAEKRND-HYRLNGTKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G +K+G R + T EL F + F +LG+ ++ Sbjct: 187 TAFLIEKEMAGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGRGVAV-----LM 241 Query: 316 IYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + +SG+ + L E + Y R G + + +M+ IAD+ + +A Sbjct: 242 SGLDYERVVLSGVNIGIMAGCLDEVMPYMTERRQFGEPIGNFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A ++ +A + D + ++AA + + + V +A++ +GG+G++ + + Sbjct: 302 AYAYEVAKACDRGEVTRQDAAACVL-------YASEEGMKVAHQAVQAMGGAGFLNDSPV 354 Query: 431 ARHYRESPANSILLGS 446 AR +R++ I G+ Sbjct: 355 ARMFRDAKLMEIGAGT 370 >gi|167834906|ref|ZP_02461789.1| putative acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 378 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + G Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTAVR-DGGHYVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTDMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAEMKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW ++ VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|118471487|ref|YP_886355.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118172774|gb|ABK73670.1| isovaleryl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 384 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 20/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCF 256 + LTE GG+D+ A+ + ++ D Y ++G K W ++ SD ++ + + + Sbjct: 120 MALTEPGGGSDLQAMRTVARRDGDD-YVINGSKTWISNARRSDLVALMCKTDPDAQPAHK 178 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 V LL + P G R K+G + + EL F++ LLGD + G + MK Sbjct: 179 GVSILLVEKVP-GFDVSRDLPKLGYKGVESCELNFTDARVPVSSLLGD-DEGRGFAQMMK 236 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L A + R + +A+ Y++ R G + + +AD+ + AA + Sbjct: 237 GLEVGRLQVAARATGVARAAFEDALRYSQERESFGKPIWQHQSVGNMLADMGTKLYAARS 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A FD + EA A++ A T A + +A+ GG GY E + Sbjct: 297 LLLSAAEKFDAGQRCDMEAGMAKLFASET-------AMQIALDAVRVHGGYGYSTEYDVE 349 Query: 432 RHYRESPANSILLGSGN 448 R++R++P +++G G Sbjct: 350 RYFRDAPL--MIVGEGT 364 >gi|119385631|ref|YP_916686.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119376226|gb|ABL70990.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 375 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 30/261 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE G+D + + ++ ++ D Y + G K F+SS + +++ V G+ G Sbjct: 120 GFALTEPHAGSDASNLRTKARREGDH-YVIDGAKQFISSGKNGKVVIVFAVTDAAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305 F+VP +P G +++K+G S+ T L F+ N G ++ Sbjct: 179 ISAFIVP----TDTP-GYEVVSVEHKLGQHSSDTCALAFTGMRVPVENRLGAEGEGYRIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A+ YAR R G +I+ + +AD+A Sbjct: 234 LSNLEGGRIGI----AAQAVGMARGAYEAALAYARERITFGRPIIEHQAVAFRLADMATQ 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA + R A + K EA+ A++ A +MA V + A++ GG GY+ Sbjct: 290 IDAARLMVLRAAMLREAGKPCLTEASMAKLFA-------SEMAERVCSAAIQLHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGS 446 + + R YR+ I G+ Sbjct: 343 ADYPVERIYRDVRVCQIYEGT 363 >gi|289670161|ref|ZP_06491236.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 391 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 16/237 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GL+E +GG+D AA+T++ + DG + L+G K W + ++ I+ A + V FLV Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWAHTDDGVRGFLV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 E SP G Q + +K+ R++ T L N F L + G + L Sbjct: 196 ----ETYSP-GFSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQA 250 Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 I ++ L EA+ YA R + G L + +AD+A I+ A L+ +L Sbjct: 251 RYGIAWGAIGAAVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + R E+ + A K+ C+MA V E + +G +G E RH Sbjct: 311 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360 >gi|321249273|ref|XP_003191401.1| isovaleryl-CoA dehydrogenase 2, mitochondrial precursor [Cryptococcus gattii WM276] gi|317457868|gb|ADV19614.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 417 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 29/261 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVG--- 254 L ++E G+D+ ++ + K G + ++G K W ++P+S F++ A+ + V Sbjct: 153 LAMSEPDAGSDVVSMRTNAIKGDKGEGWTMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 212 Query: 255 ---CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 FLV + E G +K G R + T EL F N + + NV + Sbjct: 213 GMTAFLVEKGWE-----GFEVGESLDKFGMRGSPTAELFFDNV---KIPEENVLGEVGKG 264 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +L+ LD + +SG M+ +L A+ Y R G + +M+ +AD+ Sbjct: 265 ASVLMSGLDLERLVLSGGPLGIMQAALDMALDYTHERKQFGKQIGTFQLMQGKLADMYTK 324 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++A+ A + +A + D K + A A + + A V EA +C+GG+GYI Sbjct: 325 LSASRAYVYAVARACDAGKISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYI 377 Query: 426 EERSIARHYRESPANSILLGS 446 + R R+S ++ G+ Sbjct: 378 NDYPAGRLVRDSRLYTVGAGT 398 >gi|312139134|ref|YP_004006470.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311888473|emb|CBH47785.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length = 377 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA-QVEGRVGCFLV 258 +G+TE G+D+ AI + + D Y ++G K F+++ S I+LA + + + G V Sbjct: 122 IGMTEPGAGSDLKAIRTTAVRDGDH-YVVNGSKTFITNGSSADMIVLAVKTDPKAGARGV 180 Query: 259 PRLLED--GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 L+ D P G R+ +K+G + T EL F + LLG+ G + Sbjct: 181 SLLIVDLRDCP-GFTVGRVLDKVGQHAADTSELSFVDVKVPVSNLLGEEGQGFGQLIAQL 239 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + L A + M ++ E + Y + R G L + + A ++A ++ Sbjct: 240 VQERLIIAAQASGAMNRAVEETVAYVKSRQAFGHSLFE-------FQNTAFELAECQTIA 292 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D A + KYW V+ ++ GG GY+ E +AR Sbjct: 293 RTCEVFLDHCIQEHLRGELDAAEAAMAKYWLTDKQCEVVDRCVQLHGGYGYMREYLVARM 352 Query: 434 YRESPANSILLGSGNAM 450 Y ++ I G+ M Sbjct: 353 YEDARVQKIYAGANEVM 369 >gi|190572278|ref|YP_001970123.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] gi|190010200|emb|CAQ43808.1| putative glutaryl-CoA dehydrogenase [Stenotrophomonas maltophilia K279a] Length = 390 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GLTE GG+D A++ + + + DG + +SG K W S P++D I+ AQ E + F+ Sbjct: 136 FGLTEAHGGSDPASMKT--RAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGFV 193 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G Q +K+K+ R++ T L F + L ++ GP+ + Sbjct: 194 LQKGMA-----GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGPLGCLTQ 248 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 Y + + L EA+ YA+ R + G L + +A++A I A L+ Sbjct: 249 ARY-GISWGPIGAAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTAQLLAL 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +L + + + ++ + A K+ C+MA + E + +GG+G E RH Sbjct: 308 QLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHVAIRH 359 >gi|126435228|ref|YP_001070919.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126235028|gb|ABN98428.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 611 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 48/299 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + SDG + ++G K F+S + D ++LA+ +G Sbjct: 164 LTEPDAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F VP+ L D S NG+ +++K+G +S+ T E+ F G+L+G Sbjct: 224 TKGLSMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGGDQPAIGWLVG 283 Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--------- 349 D V G + K++ + + +MS + A+ YA+ R + G L Sbjct: 284 D--VHNGIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTR-IQGPDLTRTSDKTAP 340 Query: 350 ----IDQPVMKRAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396 I P ++R++ A+ + TA+ + S +E A+I + Sbjct: 341 RVPIIRHPEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLL 400 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K + A + +++ GGSGY+++ + ++ R+ N++ G+ D+L Sbjct: 401 LPVVKAVSSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLL 459 >gi|73537387|ref|YP_297754.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72120724|gb|AAZ62910.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 396 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 28/275 (10%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQG--QKISDG-IYCLSGHKWFLSSPM-SDAFIML 246 M + + ++E G+D+ ++ ++ +K +G Y ++G K F+++ +D ++ Sbjct: 127 MASGEMVAAIAMSEPGAGSDLKSVRTRAVREKTENGDCYRINGAKTFITNGYHADLVCLI 186 Query: 247 AQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL 302 A+ + G V ++ E G R+ KIG + T EL F + LLG+ Sbjct: 187 AKTDPEAGTRGVSLIMVETRDLPGFRRGRILEKIGQKGQDTAELFFDDVLVPCENLLGEQ 246 Query: 303 N-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 + P E M I A+ +V+ M+ ++ Y R R V G L+D Sbjct: 247 EGQGFYQLMQQLPQERMII------ALGAVASMQRAIELTTDYVRERKVFGQPLLDLQNT 300 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A+ + A A +F ++ R E A + K+WC + +I E Sbjct: 301 RFKLAECKTN--ATIAATF-----VNDCMVRLMEGKLDAATAAMAKWWCTQRNCEIIDEC 353 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR Y + I GS M Sbjct: 354 LQLHGGYGYMLEYPIARMYANARVGKIYGGSNEIM 388 >gi|77360395|ref|YP_339970.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis TAC125] gi|76875306|emb|CAI86527.1| Isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis TAC125] Length = 391 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + ++ A+ + G + Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDAHTLVIYAKTDLTAGAKGI 190 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F N +LG+LN E +K+L Sbjct: 191 TAFIVESDFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 + LD + ++ + + +A + Y R D P+ ++ +AD+ Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA + + +A S D ++ ++AA A + + ++A + +A++ +GG+GY Sbjct: 300 QMNAARSYVYTVARSCDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374 >gi|302344548|ref|YP_003809077.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301641161|gb|ADK86483.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 380 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 27/263 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-------GR 252 + +TE G+D+A I + Q+ D + ++G K F+S+ ++ ++A + Sbjct: 123 VAMTEPNTGSDLANIRTTAQQDGD-MVVINGQKTFISNGINCGVCVVAAKDPAEKDPYKA 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+V E +P G R NKIG S T EL F++ G LGD G + Sbjct: 182 IDLFVV----EADAP-GFEKGRKLNKIGWHSQDTAELYFTDCRIPVGNRLGDK--GAGFI 234 Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M+ L L I +V+ V L I Y + R G + + + ++A ++ Sbjct: 235 MLMQKLQQERLICGIGAVAAAEVILERTIAYCKERSAFGKPISKFQNTQFELVEMATEVK 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + E KS E + + KYW +M V ++ GG GY EE Sbjct: 295 LGRLFVDKCIADHMEGKSLPAEVS-------MLKYWTTEMVKNVADRCLQLHGGYGYCEE 347 Query: 428 RSIARHYRESPANSILLGSGNAM 450 IAR +R+ SI G+ M Sbjct: 348 YPIARAWRDVRVMSIFAGTNEIM 370 >gi|264677846|ref|YP_003277752.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262208358|gb|ACY32456.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 385 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 46/315 (14%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 ++ S ++A T + + W P++ S E + G+ +TE G+D+ A+ Sbjct: 96 TIASHYLLAYGTEEQKQR-WLPRLCSGE-------------LLAGIAMTEPSVGSDLKAM 141 Query: 215 TSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL-LEDGSPNGLCY 272 ++ Q+ DG Y ++G K F+++ + +++A G G V + LE + G Sbjct: 142 RTRAQR--DGEHYVINGSKTFITNGYTANLLVVAVRTGDAGSGGVSLVVLETENLPGFRV 199 Query: 273 QRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 R KIG + T EL F + LLG G + M L Y + ++ VS Sbjct: 200 GRRLGKIGQHISDTAELFFEDLRIPVSHLLGGTE-GQGFKQLMSQLPY-ERMLLGVSAAA 257 Query: 330 VSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF------RLANSF 380 + Y ++R G + D + +A+ A A SF RL + Sbjct: 258 AIEMAVALTVDYTQQRKAFGQTIADFQNTRFKLAECA--TTAHVVRSFVNDCIQRLLDG- 314 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 + EAAY + K+WC + V+ E ++ GG GY+EE IAR Y ++ Sbjct: 315 ----TLDNEAAY------MAKWWCSEQQCKVMDECLQLFGGYGYMEEYPIARLYTDARIQ 364 Query: 441 SILLGSGNAMVLDVL 455 I G N ++ D++ Sbjct: 365 KI-YGGANEIMKDLI 378 >gi|261189941|ref|XP_002621381.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239591617|gb|EEQ74198.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] Length = 438 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K G Y ++G K W +S + FI+ A Sbjct: 167 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-YKINGSKMWITNSMEAGFFIVFAN 225 Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 ++ G + ++E G+P G + + K+G R+++T L F + + N+ Sbjct: 226 IDLSKGYKGITAFIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 281 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQ-PVMKRAIA 360 + K I L+ + ++ LA A +Y G LI + M+ +A Sbjct: 282 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAANYIWNDRRQFGQLIGEFQGMQHQVA 341 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +IAAA AL + A + + ++AA A++ + ++A V A+E +G Sbjct: 342 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMG 394 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G G++ E + +R+S +I G+ N + + +L+K Sbjct: 395 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 434 >gi|254420863|ref|ZP_05034587.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] gi|196187040|gb|EDX82016.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Brevundimonas sp. BAL3] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 20/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + + D Y L+G K F+S + SD ++++ + G + Sbjct: 124 LTEPGSGSDAAALRTTAVRDGDH-YVLNGSKAFISGAGTSDLYVVMVRTGGEGAKGVSAL 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 ++E G+P GL + + K+G + T ++F +N G + ++ + Sbjct: 183 VVEAGTP-GLSFGAQERKMGWNAQPTAIVQFDDCRVPAANLLGEEGAGFRYAMAGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G R++L A Y R G + + ++ +AD+A D+ AA + Sbjct: 242 LNI----AACSLGGARLALETAQDYVATRKQFGRPIGEFQALQFRLADMATDLEAARLMV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R A + D E+ + + + C ++A EA++ GG GY+++ + R Sbjct: 298 LRGAWAID--TDHPEKTKWCAMAKRLATDACFQIAD----EALQLHGGYGYLKDYPLERI 351 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ + IL G+ M + + + +G Sbjct: 352 VRDLRVHRILEGTNEIMRVIIAREMARG 379 >gi|85713545|ref|ZP_01044535.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] gi|85699449|gb|EAQ37316.1| acyl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] Length = 404 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + S+ +K+SDG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPGGMKSRAEKVSDG-YRLTGSKTWISNAPIADLFVVWARSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASVTGEIVMDGVVVPEESLLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S G+ + + +H AR+ R G L ++++ +AD+ +IA Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARKYVLERKQFGRPLAAAQLVQKKLADMQTEIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K E M I K C A + A + GG+G E Sbjct: 314 LGLQGSLRVGRLMDEGKMTPE-------MISIIKRNNCGKALDIARAARDMHGGNGIQIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YHVMRH 372 >gi|119504471|ref|ZP_01626550.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium HTCC2080] gi|119459493|gb|EAW40589.1| acyl-CoA dehydrogenase-like protein [marine gamma proteobacterium HTCC2080] Length = 394 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D+AA+T Q+ D + L+G K W ++ ++D + + A+ G C Sbjct: 134 LSEPNAGSDVAAMTCSAQRDGD-EWVLNGTKTWISNAGIADFYTVFARSSDAGGAKGISC 192 Query: 256 FLVPRLLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 F+V E G+P +R+ + +G L+F+N L+G+ G Sbjct: 193 FIV----EAGTPGFEVTERIDLVAPHPLGT-------LQFTNCRIPAASLVGEEGRGFGI 241 Query: 309 VEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M L S + + + GM R +L E + Y R + GG L D +++ I ++AL + Sbjct: 242 A--MATLDVFRSTVAAAALGMARRALDETLDYTAERDIFGGKLGDLQLVQAKIGEMALGV 299 Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A+ L +R A + D A R + EAA A KY + A VI A++ GG G Sbjct: 300 DASALLVYRAAWTKDCAAERVTREAAMA-------KYHATETAQQVIDAAVQLHGGKGVT 352 Query: 426 EERSIARHYRESPANSILLGS 446 + + YR+ A I G+ Sbjct: 353 KGYIVESLYRDIRALRIYEGA 373 >gi|148253939|ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146406112|gb|ABQ34618.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 404 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A + ++ +K++DG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F +LE G GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEVVMDGVVVPEEALLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S G+ + + +H AR+ R G L ++++ +AD+ +IA Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGKPLAATQLVQKKLADMETEIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K E M I K C A + A + GG+G E Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARVARDMHGGNGIQIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YQVMRH 372 >gi|297154276|gb|ADI03988.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces bingchenggensis BCW-1] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVG 254 G L+E + G+D AA+T + K +DG Y ++G K W + + + A+ + Sbjct: 124 GYSLSEPQAGSDAAALTCRADKDTDG-YRINGAKAWITHGGEAGFYALFARTSPGSDGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 CFL P G +GL + R + K+G + T + N LL + + ++I Sbjct: 183 CFLAP-----GHTDGLTFGRPEEKMGLHAIPTTAAFWDNA---LLDPDRLIGREGQGLQI 234 Query: 315 LIY-LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAA 368 LDS + ++ LA+A A R G +ID + +AD+A + + Sbjct: 235 AFSALDSGRLGIAACATGLAQAALDAAVAYAHERTAFGRKIIDHQGLGFLLADMAAAVDS 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A A D + S +A+ A+++A A V +A++ GG GY + Sbjct: 295 ARATYLDAARRRDAGRPYSRQASVAKLIA-------TDAAMKVTTDAVQVFGGYGYTRDY 347 Query: 429 SIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 348 PVERYMREAKIMQIFEGT 365 >gi|297193204|ref|ZP_06910602.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197720474|gb|EDY64382.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 608 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/313 (21%), Positives = 141/313 (45%), Gaps = 53/313 (16%) Query: 183 YDPTNKAPMQKTSVAI------GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 +D N+A + +A+ + LTE G+D+ A ++ + DG + + G K F++ Sbjct: 139 FDEGNEAQKKIAEIAVEKRWGSTMVLTEPDAGSDVGAGRTKAIQQEDGSWHIEGVKRFIT 198 Query: 237 SPMSDA-----FIMLAQVEGR------VGCFLVPRLLED------GSPNGLCYQRLKNKI 279 S D +LA+ EG + FLVP+ D G NG+ +++K+ Sbjct: 199 SGEHDMEENILHYVLARPEGAGPGTKGLSLFLVPKYHFDWETGELGERNGVYATNVEHKM 258 Query: 280 GNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLA 333 G +++ T E+ F + G+L+GD + + M ++I ++ +++ + Sbjct: 259 GLKASNTCEMTFGDQHPAKGWLIGDKHDG---IRQMFMIIEFARMMVGTKAIATLSTGYL 315 Query: 334 EAIHYARRRHVSGGILID-------------QPVMKRAIADIALDIAAATALSFRLANSF 380 A+ YA+ R V G L + P ++R++ AL A+ Sbjct: 316 NALEYAKER-VQGPDLKNFADKTAPKVTITHHPDVRRSLMTQKAYAEGMRALVLYTASIQ 374 Query: 381 DE---AKSRSEEA----AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 DE ++ E+ A ++ PI K + + + +A++++ GGSGY++E + ++ Sbjct: 375 DEIALKETAGEDTKSLVALNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPVEQY 434 Query: 434 YRESPANSILLGS 446 R++ +++ G+ Sbjct: 435 IRDAKIDTLYEGT 447 >gi|156743108|ref|YP_001433237.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156234436|gb|ABU59219.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 445 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 44/277 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K LTE GTD A+ + ++ D Y L+G K W + ++D F++ A+ Sbjct: 159 PQAKGEKIAAYCLTEPNSGTDAGAMLATARRDGDS-YILNGEKTWISLADIADNFLVFAK 217 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 + G CF+V R + G + K+G R+ NT +L D+ Sbjct: 218 TDPSKGNRGISCFIVERTMP-----GFSSLPIHGKLGVRAG--------NTGSVILEDVR 264 Query: 304 VSTGPV--------EDMKI-LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGIL 349 V PV E KI + LD+ +V+ ++ SL +I YA+ R G + Sbjct: 265 V---PVANRLGEEGEGFKIAMTALDNGRYTVAAGATGLIQASLEASIRYAQERQTFGVPI 321 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + ++KR I+ + + + L +R ++ + + E A+ A ++ + Sbjct: 322 AEHQLVKRMISHMVRKLDTSRLLVYRAGWMKNQGRRNTRETTLAKWHATVSSFEAAD--- 378 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ G GY +E + R+ R + I G+ Sbjct: 379 ----DAIQIHGAYGYSDEYPVERYLRNARGAIIYEGT 411 >gi|109900292|ref|YP_663547.1| glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c] gi|109702573|gb|ABG42493.1| Glutaryl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c] Length = 394 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 11/172 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A++ +Q +++ DG YCL+G K W +SP++D F++ ++ G + F++ Sbjct: 139 FGLTEPNSGSDPASMLTQAKEV-DGGYCLNGSKMWITNSPIADVFVIWGKLNGAIRGFIL 197 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + ++ GL +++ K R++ T E+ + F +L D+ GP + Sbjct: 198 EKNMQ-----GLSAPKIEGKFSLRASVTGEVVMQDVFVPVENILPDVEGLKGPFSCLNKA 252 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 Y A S+ +A Y R L ++++ +AD+ +I+ Sbjct: 253 RY-GIAWGSLGAAEFCWHQARQYCLDREQFSRPLAANQLIQKKLADMQTEIS 303 >gi|207722669|ref|YP_002253105.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206587851|emb|CAQ18433.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 403 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%) Query: 190 PMQK----TSVAIG-----LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 P Q+ T VA G L+E G+D+AA+ + DG Y L G K W + + Sbjct: 111 PAQRERYLTQVARGEAIAAFALSEPDAGSDVAALACAARVDGDG-YVLDGEKTWISNGGI 169 Query: 240 SDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLK----NKIGNRSNATVELEFSNT 294 +D +++ A+ G + ++E G+P +R+ + + + + Sbjct: 170 ADFYVVFARTGEAPGARGISAFIVEAGTPGFEIAERIDVIAPHPLARLRFTGCRIPAAQR 229 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 G V+ ++ + + A ++ R +L EA+ A R + G+L D + Sbjct: 230 VGAAGEGFKVAMRTLDVFRTSV----AAAALGFARRALDEALARATTRKMFNGVLADFQL 285 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +A +A I +A L++R A D+ +S + EAA A++ A + A VI Sbjct: 286 TQAKLAQMATAIDSAALLTYRAAWQRDQGRSVTREAAMAKMTA-------TENAQQVIDA 338 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG G + E+ + R YRE A I G+ Sbjct: 339 AVQMWGGLGVVSEQPVERLYREIRALRIYEGA 370 >gi|117927614|ref|YP_872165.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B] gi|117648077|gb|ABK52179.1| butyryl-CoA dehydrogenase [Acidothermus cellulolyticus 11B] Length = 388 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 36/278 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLA 247 P+ + GLTE GG+D A ++ DG + + G K F+++ ++ + I + Sbjct: 118 PLARGERLGAFGLTEPGGGSDAGATATRAVPDGDG-WRIRGTKAFITNAGTEITSVITVT 176 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + G+ + F+VP +GL +K+G ++ T ++ + + L Sbjct: 177 AITGQRDGEKEISSFIVPV-----PSSGLTVSPPYSKVGWHASDTRQVFLDDVYVPADHL 231 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQP 353 LGD L LD ++++ + V LA EA+ YA RH G + Sbjct: 232 LGDRGRGY-----ANFLAILDEGRIAIAALAVGLAQGCLDEALRYAGERHAFGRPIGAFQ 286 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+A + A + A K ++AA I K + +A Sbjct: 287 AIQFKLADMAARVHTARLAYYDAARRMLAGKPFKDQAA-------IAKLYASDVAVCNAR 339 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +A + GG+G+I E +AR +R+ A + +G G + V Sbjct: 340 DATQIFGGAGFINETPVARFWRD--AKILEIGEGTSEV 375 >gi|326470196|gb|EGD94205.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818] gi|326481034|gb|EGE05044.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97] Length = 539 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 263 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 321 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 322 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 380 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 381 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 434 Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416 A SF L N + ++ E+AA R+ I T +C + A + Sbjct: 435 EA----SFNWLENLVYQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 490 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR+ A +I GS M+ Sbjct: 491 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 521 >gi|302557867|ref|ZP_07310209.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302475485|gb|EFL38578.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 385 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 40/302 (13%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQK 220 +A T + W P++ S E A+G LTE G+D ++T++ ++ Sbjct: 100 IASHGTDEQRESWLPRLASGE--------------ALGCFALTEPGTGSDAGSLTTRAKR 145 Query: 221 ISDGIYCLSGHKWFLSSPM--SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 D + + G K F+++ + A E V FLVP G + K Sbjct: 146 DGDD-WIIDGGKMFITNGTVAAVALTFARTSEKGVTAFLVPT-----DTPGFTATEIHGK 199 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE- 334 +G R AT EL + + LG+++ G L L +SVS V LA+ Sbjct: 200 LGLRGQATAELTYESVRVPDSARLGEVDRGLGIA-----LGALSRGRISVSAGAVGLAQG 254 Query: 335 ----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 A+ Y+ R G + +++ +AD A+D+ A L+ +A D S E A Sbjct: 255 ALDAAVRYSTERAQFGRPIASFQLVQELLADSAVDVQTARLLTHHVARMADAGASPKEYA 314 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A KY + A V ++ GG G+I+E + ++ R++ ++ G+ Sbjct: 315 ----TDASAAKYHASETAVRVSNNCLQVFGGYGFIDEYPVGKYLRDARVLTLYEGTSQVQ 370 Query: 451 VL 452 L Sbjct: 371 KL 372 >gi|226361541|ref|YP_002779319.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240026|dbj|BAH50374.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 395 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 40/291 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQ 248 PM LTE G+D+ +IT++ + DG + LSG K ++ ++P++D ++LA Sbjct: 117 PMLSAEKRCAYALTEPGSGSDLGSITTRAVRSGDG-WVLSGEKIYIHNAPVADFAVVLAV 175 Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 + G + FLV D G+ ++K+G R++ L F + LL Sbjct: 176 TDPELGKRGGISVFLV-----DVDQPGVSRAYHEHKMGQRASQVGGLVFDSVRLPSDALL 230 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV----- 354 G+ + G + MK+L + +SG+ + ++ A A R +P+ Sbjct: 231 GEEGKAFGYM--MKVLA---KGRLGISGLSLGISRAALDAATRQSLDRSQFGKPISANQG 285 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW----CCKMAPA 410 + ++A +A ++ A TALS A + D AA A + + K + C + A A Sbjct: 286 ISFSLATVATELRAGTALSVEAARALDTG------AADAETLCSMAKLYASEGCVRHADA 339 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 A++ GG+G+I + R YR++ I G+ L + + KG Sbjct: 340 ----AVQVFGGNGFIRGYEVERLYRDARITKIYEGTSEMQRLIISRAVLKG 386 >gi|91791072|ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] gi|91700953|gb|ABE47124.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] Length = 381 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 32/306 (10%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M +P + +P+ R Y P P+ + + +TE G+D+A I ++ + D Sbjct: 96 MASPHLANFGSPEQLQR-YLP----PIIRGEKICAVAVTEPDAGSDVAGIRTRAVREGDE 150 Query: 225 IYCLSGHKWFLSSPMS-DAFIMLAQVE----GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + ++G K F+++ + D + + A+ + G G + ++E G+P G R NK Sbjct: 151 -WVINGSKMFITNGVQGDVYFVAAKTDPTAKGSRGISIF--IVEKGTP-GFRVGRALNKS 206 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSL 332 G + T EL F N LLG+ N G + M+ + L + M + + L Sbjct: 207 GWLCSDTAELVFENCRIPAANLLGEEN--KGFYQIMRNFQNERMVLGAQTMGEAARAIEL 264 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y R R G L D+ +++ +A A +AAA L + A + + +E + Sbjct: 265 T--LDYVRERKAFGATLWDKQAIRQRLAMRASQVAAARQLVYHAAWLDAQGRECVKEVS- 321 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + K C + V+ + + GG GY+ E +I R R++ +I G+ M+ Sbjct: 322 ------MVKALCGNLVNDVVYDCQQFHGGFGYMREAAIERMVRDARVQAIGGGATEVMLE 375 Query: 453 DVLNLL 458 +V L Sbjct: 376 EVAKRL 381 >gi|126455128|ref|YP_001064354.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|167736479|ref|ZP_02409253.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] gi|167813557|ref|ZP_02445237.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 91] gi|167843702|ref|ZP_02469210.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|167908910|ref|ZP_02496001.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 112] gi|242317521|ref|ZP_04816537.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|126228770|gb|ABN92310.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|242140760|gb|EES27162.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] Length = 378 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW + VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|284163795|ref|YP_003402074.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284013450|gb|ADB59401.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 23/292 (7%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 +SM+ + ++W PKI A + SV++ ++E G+++A I + Sbjct: 94 SSMIMEFGDEWMKEEWLPKI----------ADGEIASVSM---ISEPAHGSNVAGIETVA 140 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K D Y +G+K W + ++D +++A+ G + L + +G+ ++ N Sbjct: 141 EKDGDE-YVANGNKMWITNGTVADIGVLMAKTSPGEGHKGITAFLVEMDWDGITTDKIDN 199 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE 334 K+G R++ E+ + ++G+++ + + + A +V + +L Sbjct: 200 KLGIRASDLAEVVIDDVRIPEENVIGEVDKGFYQLMEFFAAGRANVAAQAVGAAQGALDA 259 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 A+ YA +R + + ++ IA++A + AA +L++R A ++ E A Sbjct: 260 AVEYANQREQFDQKIKEFQAIQHKIAEMATKVEAARSLTYRAATQVEQ-----ENQDIAA 314 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + K + +++ V E ++ GGSGY+ + R+YR++ I G+ Sbjct: 315 QYSSMAKLFASEISVEVADEGIQVHGGSGYVTDYPAERYYRDARITKIYEGT 366 >gi|256113639|ref|ZP_05454454.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|265995001|ref|ZP_06107558.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|262766114|gb|EEZ11903.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] Length = 394 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|255524283|ref|ZP_05391241.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|296185242|ref|ZP_06853652.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7] gi|255511966|gb|EET88248.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|296050076|gb|EFG89500.1| butyryl-CoA dehydrogenase [Clostridium carboxidivorans P7] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 GLTE GTD A Q + +G Y L+G K F+++ +++ F++ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQSTAVLEGDHYILNGSKIFITNGGVAETFVVFAMTDRSKGTKG 180 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E G P G ++++K+G R+++T EL F + LLG G MK Sbjct: 181 ISAFVIEKGMP-GFSIGKVEDKLGIRASSTTELIFEDVKVPKENLLGKEGKGFGIA--MK 237 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LD + ++ + +AE A+ Y + R G + ++ IAD+ + + A Sbjct: 238 T---LDGGRIGIAAQALGIAEGALDAAVAYMKERKQFGKPISAFQGLQWYIADMKVRVEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L F+ A + +AA A++ A T + V +A++ +GG GY ++ Sbjct: 295 AHYLVFKAAWKKQSDMPYTIDAAEAKLYAAETAMY-------VTTKAVQILGGYGYTKDY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 PVERMMRDAKITEIYEGT 365 >gi|167524148|ref|XP_001746410.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775172|gb|EDQ88797.1| predicted protein [Monosiga brevicollis MX1] Length = 417 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-----EGRV 253 L ++E G+D+ ++ + + D Y L+G+K W + P +D ++ A+ + + Sbjct: 158 LAMSEPGSGSDVVSMRLKAEDKGDH-YVLNGNKFWITNGPDADVLVVYAKTDMAAHQRGI 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FL+ R E G + +K+G R + T EL F N +LG++N Sbjct: 217 TAFLIERDFE-----GFSSAQKLDKLGMRGSNTCELVFENCKVPKENVLGEVNKGV---- 267 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ LD + +SG + L +A + Y R G + + +M+ +AD+ Sbjct: 268 -YVLMSGLDLERLVLSGGPLGLMQAAMDITLDYVHTREQFGQRIGEFQLMQGKLADMYTR 326 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A A + +A D+ ++ ++ A + + + A V +A++C+GG+GYI Sbjct: 327 LTANRAYVYSVAKKCDQGRADPKDCAGVIL-------YSAEAATQVALDAIQCLGGNGYI 379 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 + R R++ I G+G + V Sbjct: 380 NDYPTGRILRDAKLYEI--GAGTSEV 403 >gi|158422200|ref|YP_001523492.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158329089|dbj|BAF86574.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 380 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 34/313 (10%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ P W PK+ + + + LTE G+D AA+ ++ Sbjct: 93 AWMIDRFGAPEQRTRWLPKLCAMD-------------IVASYCLTEPGSGSDAAALKTRA 139 Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 + D Y L G K F+S + SD + ++A+ G + L+E G+P GL + + Sbjct: 140 ARDGDH-YVLHGEKQFISGAGASDLYAVMARTGGEGPGGVSTILVEAGTP-GLSFGANEK 197 Query: 278 KIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 K+G R T V + N G + ++ ++ I A S+ G + Sbjct: 198 KMGWRVQPTRAVIFDGVRVPVENRIGAEGDGFKFAMAGLDGGRLNI----AACSLGGAQA 253 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 +L +A+ Y R G + ++ +AD+ ++ A +R A++ D + ++ Sbjct: 254 ALDKALAYTAERKAFGKAINQFQALQFRLADMETELEVARTFLWRAASALDRSDPKATR- 312 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + K + V EA++ GG GY+ + + + R+ + IL G+ M Sbjct: 313 -----LCAMAKRFVTDAGFEVANEALQLHGGYGYLADYGVEKIVRDLRVHQILEGTNEIM 367 Query: 451 -VLDVLNLLEKGT 462 V+ L+ +G Sbjct: 368 RVIIARGLVARGN 380 >gi|148553747|ref|YP_001261329.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148498937|gb|ABQ67191.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 393 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 19/255 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 G L+EK G+D+AA+T+ +++ G + ++G K W + ++D + A+ G Sbjct: 130 GFALSEKEAGSDVAAMTTSARRVEGG-WIINGEKTWISNGTIADLLTVFARSGEAPGARG 188 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + G + I AT+ F F LLG+ G M Sbjct: 189 ISAFAFPTATRGFSITERIDVIAPHPLATI--RFDECFVPDDHLLGE--AGQGFKVAMAT 244 Query: 315 LIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L S + ++ R + EA+ A R + G L D + + A+AD+AL ++ L Sbjct: 245 LDMLRSTVGAAALGFARRATDEALGRATSRELFGAPLSDLQLTQAALADMALGNDSSALL 304 Query: 373 SFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +R A + D+ + R + EAA A++ A T A I +A++ GG+G + + Sbjct: 305 IYRAAWAKDQGQPRITREAAMAKLHATDT-------AQLTIDKAVQLFGGAGVVRGNMVE 357 Query: 432 RHYRESPANSILLGS 446 R YRE A I G+ Sbjct: 358 RLYREIRALRIYEGA 372 >gi|117927618|ref|YP_872169.1| acyl-CoA dehydrogenase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648081|gb|ABK52183.1| acyl-CoA dehydrogenase domain protein [Acidothermus cellulolyticus 11B] Length = 406 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 19/253 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E G+D AA+T++ + DG + L G K W ++ S + + A + G + Sbjct: 140 LSEPEAGSDAAAMTTR--AVRDGEWWVLDGVKRWISNAGESRFYTVFAVTDPDAGTHGIS 197 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YL 318 + + GL + + K+G R + T E+ F+ G + + + P + + + L Sbjct: 198 AFVVEADDPGLSFGPKERKLGIRGSPTREMSFA---GCRIPEWRIIGAPGDGFSLAMRTL 254 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 D ++++ V +A+ A+ Y RR G + + ++ +AD+A+ I AA AL+ Sbjct: 255 DHTRVTIAAQAVGIAQGALDAAVGYTSRREQFGQPVAEFQGVRFTLADMAMRIEAARALT 314 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + Y K + +A AV +A++ GG GY ++ + R Sbjct: 315 YVAAAHSERGNG---DLGY---FGAAAKCFASDVAMAVTTDAVQLFGGYGYTQDYPVERM 368 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 369 MRDAKITQIYEGT 381 >gi|291448832|ref|ZP_06588222.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291351779|gb|EFE78683.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 381 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + D Y L+G K F+S + S +I+LA+ G G + Sbjct: 124 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLART-GEDGPRGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 + + GL + + K+G + T V + G G ++ + + Sbjct: 182 FVVERDDPGLSFGANEKKMGWNAQPTRQVLLDGVRIPADRLLGEEGGGFRIAMNGLNGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G + +L ++ + R GG L+D ++ +AD+A ++AAA AL Sbjct: 242 LGI----AACSLGGAQNALDRSLAHLADREAFGGRLLDAQGLQFRLADMATELAAARALV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + D A A + + K++ +V A++ GG GY+ E I + Sbjct: 298 RQAAEALD------RNTAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYGIEKI 351 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 352 VRDLRVHQILEGTNEIM 368 >gi|256375733|ref|YP_003099393.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] gi|255920036|gb|ACU35547.1| acyl-CoA dehydrogenase domain protein [Actinosynnema mirum DSM 43827] Length = 381 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 41/298 (13%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 + T + W P+ S E + +G+TE GG+D+AA+ + + DG Sbjct: 103 LCTEEQKRRWLPRFCSGE-------------LVTAIGMTEPSGGSDLAALKTTA--VRDG 147 Query: 225 I-YCLSGHKWFLSSPMSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 + L+G K F+++ S +++A G G L +E G+P G R +K+ Sbjct: 148 SDWVLNGSKTFITNGFSADLVLVAAGTSPDRGARGISLFA--VESGTP-GFERGRKLDKV 204 Query: 280 GNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAE 334 G + T EL FS+ L+G+ V G M+ L L +A+ +++ L E Sbjct: 205 GQPESDTAELFFSDVRLPADNLVGE--VDRGFAHMMRRLPQERLGAAVSNLAHAAQILVE 262 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y + R G + K +A++ +D+ A LA++ E + Sbjct: 263 TVEYTKERKAFGQSIGSFQANKFTLAELVTKVDVTQAYVDQCVLAHNAGELTA------- 315 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 I A K+W + +V+ ++ GG GY+ E +AR + ++ I GS M Sbjct: 316 --IDAAKAKFWTADVQNSVLDACVQLHGGYGYMTEYRVARAWMDARVTRIWAGSNEIM 371 >gi|325105307|ref|YP_004274961.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter saltans DSM 12145] gi|324974155|gb|ADY53139.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter saltans DSM 12145] Length = 591 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 48/290 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257 LTE G+D + ++ +G Y ++G K W + +D FI+ A++E + F+ Sbjct: 144 LTEPNSGSDANSGKTKATLNPEGSHYLINGQKMWITNGGFADIFIVFARIEDDKNLTAFI 203 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V R + G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 204 VER-----NFGGISMNPEEHKMGIKGSSTRQIFFNDCPVPVENMLSERGNGFKIAVNILN 258 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-PVMKRAIADI 362 + I L +A + S R + AI+YA R V G+ I + ++ +A++ Sbjct: 259 IGR---------IKLGAATIGSS--RKVIDTAINYANER-VQFGLQISKFGAIRYKLAEM 306 Query: 363 ALDIAAATALSFR------------LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 A A + ++R +A+ D AK++ + + I K W +M Sbjct: 307 ATRNFAIESATYRAGQNIDDAYNGLVASGMDSAKAKLKSTEEFAVECAIIKVWGSEMLDY 366 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V+ E ++ GG G+ E + R YR+S N I G+ L ++++L K Sbjct: 367 VVDEGVQIYGGMGFSAEAPMDRAYRDSRINRIFEGTNEINRLLIVDMLLK 416 >gi|296387009|ref|ZP_06876508.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas aeruginosa PAb1] Length = 413 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 34/269 (12%) Query: 222 SDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVPRLLED-----G 265 +DG Y +SG K F++ D ++LA++ + FLVP++L + G Sbjct: 7 ADGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKVLVNADGSLG 66 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N L +++K+G +++AT + F G+L+G++N + M L I + Sbjct: 67 EKNSLGCGSIEHKMGIKASATCVMNFDCATGWLVGEVNKGLAAMFTMMNYERLGVGIQGL 126 Query: 326 SGMRVSLAEAIHYARRRHVS----GGILIDQ--------PVMKRAIADIALDIAAATALS 373 + S AI YAR R S G + D+ P ++R + + A S Sbjct: 127 ATGERSYQSAIEYARERIQSRAPTGPVAKDKAADPIIVHPDVRRMLLTMKALNEGGRAFS 186 Query: 374 FRLANSFDEAK------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A D AK +R ++ P+ K + M + GG G+I E Sbjct: 187 SYVAMQLDTAKYSEDAVTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGHGFIRE 246 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLN 456 + R+ I G+ LD++ Sbjct: 247 WGQEQLVRDCRITQIYEGTNGIQALDLVG 275 >gi|206564033|ref|YP_002234796.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|198040073|emb|CAR56054.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 377 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPHAGSEANNLRTRAE-LRDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEDNLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A+ I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|118587876|ref|ZP_01545286.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] gi|118439498|gb|EAV46129.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] Length = 384 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 24/284 (8%) Query: 175 APKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 A +F + P+ ++ AI LTE + G+D+A T D Y L G K Sbjct: 98 AISLFGTDEQKAEWLPLTRSGKAISAFALTEPQSGSDVANSTMTATDDGDA-YVLDGEKT 156 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGL-CYQRLKNKIGNRSNATVELEF 291 W + ++D + + A+ G + + G +RL+ I AT L F Sbjct: 157 WISNGGIADVYTLFARTGEAPGAKGLSAFIVTPDLKGFEVVERLET-IAPHPLAT--LRF 213 Query: 292 SNTFGFLLGDLNVSTGPVEDMKIL-----IYLDSAIMSVSGM-RVSLAEAIHYARRRHVS 345 + G + N+ + P +I I+ + + G R +L EA+ R + Sbjct: 214 T---GCRVPKKNMISTPGAGFRIAMSVLDIFRSTVAAAALGFARRALDEALSRVTTREIQ 270 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWC 404 G L D +++ IAD+ALD+ AA L +R A + D R + EAA A++ A Sbjct: 271 GSPLFDLQLVQGHIADMALDVDAAALLIYRAAWTKDSGAPRVTREAAMAKLFA------- 323 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A VI +A++ GG G + + YRE A I G+ + Sbjct: 324 TDQAQKVIDKAVQLHGGDGVRSGTQVEKLYREIRALRIYEGASD 367 >gi|148658235|ref|YP_001278440.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148570345|gb|ABQ92490.1| butyryl-CoA dehydrogenase [Roseiflexus sp. RS-1] Length = 394 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D AA + + D Y ++G K W + +D I++A + G + Sbjct: 140 LSEPGAGSDAAAQKTTAVRDGDE-YVINGIKNWVTNGDYADTIILMAMTDPSRGHRGITA 198 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 L D G ++++K+G RS + ++ + N + + + KI + L+ Sbjct: 199 FLVDPHAPGCSIVKVEHKLGIRSAHSCQMAYDN---YRVPAWRRLGEEGQGFKIAMTILN 255 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ V +A+ A+ YA+ R G +I+ + +AD+A I AA L++ Sbjct: 256 AGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADMATRIKAARLLTY 315 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D+ A+ A++ A T W +A++ G +GY +E + R++ Sbjct: 316 EAAWRKDQHLDFVSAASMAKLYASETAMWTA-------TKAVQVFGSNGYSKEYPVERYF 368 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 369 RDAKITEIYEGT 380 >gi|70731548|ref|YP_261289.1| hypothetical protein PFL_4197 [Pseudomonas fluorescens Pf-5] gi|68345847|gb|AAY93453.1| fadE13 [Pseudomonas fluorescens Pf-5] Length = 385 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 14/264 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTHARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ + G+ +K+G RS+ T ++ F N + G M++L + Sbjct: 182 SLIMVPMNTPGISLSSHLDKLGMRSSETAQVFFDNVRVPQRNRIG-HEGAGFMMQMLQFQ 240 Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + G+ + I Y + R G LID V+ +A+++ +I AL + Sbjct: 241 EERLFGAANMIKGLEYCVDSTIEYCKERKTFGSPLIDNQVIHFRLAELSTEIECLRALVY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + + A+ A++ A ++ V ++ GG G++ + +AR Y Sbjct: 301 QATEQYVRGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVARAY 353 Query: 435 RESPANSILLGSGNAMVLDVLNLL 458 R+ SI G+ M+ + L+ Sbjct: 354 RDVRLVSIGGGADEIMLGIICKLM 377 >gi|154248192|ref|YP_001419150.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162277|gb|ABS69493.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 390 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 40/265 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ ++ K D Y L+G K W + P+++ ++ A+ + G Sbjct: 131 LAMSEPGAGSDVVSMRTRADKKGD-RYILNGSKMWITNGPIAETLVVYAKTDPAAGPKGM 189 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 FLV R P Q+L +K+G R + T EL F N G + +NV Sbjct: 190 TAFLVERDF----PGFSTAQKL-DKLGMRGSDTGELVFQDCEVPEENVLGAVGRGVNV-- 242 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 ++ LD ++G + +A + Y R G + +M+ IAD Sbjct: 243 -------LMSGLDYERAVLAGGPTGIMQACMDIVLPYVHERKQFGQPIGTFQLMQGKIAD 295 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + + A A + +A + D + E+AA A + A W EA++ +GG Sbjct: 296 MYVTMNATKAYVYAVAKACDRGATTREDAAGAILYAAEKATWMA-------LEAIQTLGG 348 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GYI + R R++ I G+ Sbjct: 349 NGYINDYPTGRLLRDAKLYEIGAGT 373 >gi|239612853|gb|EEQ89840.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3] gi|327352018|gb|EGE80875.1| short-chain specific acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188] Length = 438 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 21/280 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K G Y ++G K W +S + FI+ A Sbjct: 167 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-YKINGSKMWITNSMEAGFFIVFAN 225 Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG 300 ++ G + ++E G+P G + + K+G R+++T VE+ N G Sbjct: 226 IDLSKGYKGITAFIVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDVEIPKENLLGEEGQ 284 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + + +I I +++ G + A+ I RR+ G ++ + M+ +A Sbjct: 285 GYKYAINLLNEGRIGIAAQMTGLAL-GAWENAAKYIWNDRRQF--GQLIGEFQGMQHQVA 341 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +IAAA AL + A + + ++AA A++ + ++A V A+E +G Sbjct: 342 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVAGSAVEWMG 394 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G G++ E + +R+S +I G+ N + + +L+K Sbjct: 395 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 434 >gi|239626181|ref|ZP_04669212.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239520411|gb|EEQ60277.1| acyl-CoA dehydrogenase domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 383 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 37/288 (12%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-S 237 S E AP LTE + G+D A I + + DG + ++G K F++ S Sbjct: 104 SEEQKQKYLAPAATGETLCAFALTEPQSGSDAAQIRTTA--VLDGDEWVINGSKAFITNS 161 Query: 238 PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 + F++ A+ + + F+VP G P G + + K+ NRS+ + L F Sbjct: 162 TYASTFLVAAKTDLEAKGSRGISIFIVPA----GLP-GFEVGKPEEKMSNRSSYSCPLSF 216 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRH 343 ++ L+G+LN P+ + +D +++S + V +A+ + Y++ R Sbjct: 217 TDVRIPKENLVGELNRGF-PI----FMKCVDDGRVAISAVAVGMAQGVLERAAKYSKERV 271 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G + + + +A++A +I A A+ + A D S+EA + K + Sbjct: 272 TFGHPICENQAIAFKLAEMATEIEVARAMLYNTARMSDNGVPFSKEAT-------MCKMF 324 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 C +M V ++ +GG G E + R YR+ A + +G G + + Sbjct: 325 CSEMCVRVCDMGLQIMGGYGLCNEYEVERFYRD--AKLLTIGEGTSEI 370 >gi|148554682|ref|YP_001262264.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148499872|gb|ABQ68126.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 380 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ AI + +++ D Y ++G K ++++ +D I+ A+ + +G + Sbjct: 126 IAMTEPATGSDLQAIRTTARRVGD-RYVINGAKTYVTNGQNADVVIVAAKTDPGLGARGL 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 +L D G R +KIG S T EL F++ F +L+ L Sbjct: 185 SLILVDADTPGFARGRNLDKIGLWSADTSELFFNDVEVPVANRLGEEGRGFAYLMSQL-- 242 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I A + + + + EA+ + + R G + + K +AD+ Sbjct: 243 ---PQERLSI------ATSAQAAAQRAFDEALAFVKDRTAFGQPIFEFQNTKFTLADMKS 293 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A D A R A A K W M + A++ GG+GY Sbjct: 294 QLQVGWA-------HLDWAIRRHIAGALTTAEASAAKQWHSDMQGRITDMALQLHGGAGY 346 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E IAR +R++ I G+ M Sbjct: 347 MNEYLIARLWRDARVTRIFGGTNEIM 372 >gi|33595354|ref|NP_882997.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565431|emb|CAE36240.1| glutaryl-CoA dehydrogenase [Bordetella parapertussis] Length = 408 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D + ++ + ++ G Y LSG K W +SP++D F++ A+ + G + F+ Sbjct: 146 FGLTEPDHGSDPGGMATRARGVAGG-YRLSGAKSWITNSPIADVFLIWAKDDAGDIRGFI 204 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + R ++ GL +R+ K R++ T + F +L + GP Sbjct: 205 LDRGMQ-----GLSTERIDGKFSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFS---- 255 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A + +S + AEA +H AR R G L ++++ +AD+ +IA Sbjct: 256 --CLNKARLGISWGALGAAEACLHQARDYVLARTQFGRPLASNQLVQKKLADMETEIAIG 313 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S ++A D+ + +E + I K C A + A + +G +G +E Sbjct: 314 LQASLQVARLMDQGRVSTEAIS-------IIKRNNCGKALEISRVARDMLGANGVSDEYH 366 Query: 430 IARH 433 I RH Sbjct: 367 IIRH 370 >gi|311103624|ref|YP_003976477.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310758313|gb|ADP13762.1| acyl-CoA dehydrogenase, N-terminal domain protein 2 [Achromobacter xylosoxidans A8] Length = 382 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 32/265 (12%) Query: 187 NKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFI 244 N P + IG LTE G+D A+ + D Y L+G K +++ +P++ F Sbjct: 108 NYLPKLASGELIGSFALTEPDAGSDAMALRLSAVRDGDS-YVLNGTKRYITNAPIAGLFS 166 Query: 245 MLAQV--EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 ++A+ E R + CFLV E G+P GL + K+G T ++ F N Sbjct: 167 VMARTAPERRANSISCFLV----EAGTP-GLTIGKPDKKMGQAGALTSDVVFDNCRVPAS 221 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILID 351 LLG G M++L D + +S + V +A+ A+ YA R G + + Sbjct: 222 ALLGG-EEGNGFRTSMRVL---DKGRLHISALCVGIADRLLSDAVKYAIERKQFGQPIAE 277 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 +++ IAD ++ AA + A D ++ + +AA K + +M V Sbjct: 278 FQLIQAMIADSQAELYAARCMVLDAARMRDRGENTTMQAA-------CCKLYATEMVGRV 330 Query: 412 IAEAMECIGGSGYIEERSIARHYRE 436 A++ GG+GY+ E ++ R YR+ Sbjct: 331 ADRAVQIHGGAGYMSEYAVERFYRD 355 >gi|254387925|ref|ZP_05003162.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294817475|ref|ZP_06776117.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|326446194|ref|ZP_08220928.1| putative acyl-CoA dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197701649|gb|EDY47461.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294322290|gb|EFG04425.1| Acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 382 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + +G + LSG K F+S + S ++++A+ G + Sbjct: 125 LTEPGAGSDAAALATRAVRDGEG-WVLSGVKQFISGAGASQLYVVMARTGGEGAAGVSAF 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 L+E P G+ + + K+G + T V L G ++ + + Sbjct: 184 LVEKDDP-GVGFGPDERKMGWNAQPTRQVVLDGVRLPADRLLGREGEGFRIAMNGLNGGR 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G R +L ++ + R G L+D ++ +AD+A ++AAA AL Sbjct: 243 LGI----AACSLGGARSALDRSLTHLADREAFGRRLLDADALRFRLADMATELAAARALV 298 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + D +A Y MA K + V A++ GG GY+ E I + Sbjct: 299 QQAAQALDRGDP---QAPYLCAMA---KRFATDTGYTVADRALQLHGGYGYLSEYGIEKI 352 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 VRDLRVHRILEGTNEIM 369 >gi|167576791|ref|ZP_02369665.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH] Length = 383 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTAARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGHGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 AR YR++ SI G+ M+ Sbjct: 350 ARTYRDTRLFSIGGGADEVML 370 >gi|33599653|ref|NP_887213.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567250|emb|CAE31163.1| glutaryl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 408 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D + ++ + ++ G Y LSG K W +SP++D F++ A+ + G + F+ Sbjct: 146 FGLTEPDHGSDPGGMATRARGVAGG-YRLSGAKSWITNSPIADVFLIWAKDDAGDIRGFI 204 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + R ++ GL +R+ K R++ T + F +L + GP Sbjct: 205 LDRGMQ-----GLSTERIDGKFSLRASITGTIAMDEVFVPQDRMLPHVKGLRGPFS---- 255 Query: 315 LIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A + +S + AEA +H AR R G L ++++ +AD+ +IA Sbjct: 256 --CLNKARLGISWGALGAAEACLHQARDYVLARTQFGRPLASNQLVQKKLADMETEIAIG 313 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S ++A D+ + +E + I K C A + A + +G +G +E Sbjct: 314 LQASLQVARLMDQGRVSTEAIS-------IIKRNNCGKALEISRVARDMLGANGVSDEYH 366 Query: 430 IARH 433 I RH Sbjct: 367 IIRH 370 >gi|86137609|ref|ZP_01056186.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85825944|gb|EAQ46142.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 386 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 121/261 (46%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G +K+G R + T EL F + F +LG+ + +K+L Sbjct: 187 TAFIIEKDFKGFSTSPHFDKLGMRGSNTAELIFEDCEVPFENVLGEEG------KGVKVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++G M + E + Y + R G + + +M+ IAD+ + +A Sbjct: 241 MSGLDYERVVLAGIGTGIMAACMDEMMPYLKERKQFGQPIGNFQLMQGKIADMYTAMNSA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425 A + +A + D+ ++AA CC + A +A++ +GG+GY+ Sbjct: 301 RAYIYEVAKACDKGTVTRQDAAA-----------CCLYASEQAMVQAHQAVQALGGAGYL 349 Query: 426 EERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370 >gi|89894464|ref|YP_517951.1| hypothetical protein DSY1718 [Desulfitobacterium hafniense Y51] gi|219668889|ref|YP_002459324.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] gi|89333912|dbj|BAE83507.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539149|gb|ACL20888.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] Length = 389 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D +++ + ++ D Y ++G K F+S+ + + +LA + G + Sbjct: 123 FALTEPNSGSDASSLVTTAKRRGDH-YVINGSKRFISNTGYAGIYTVLASTDRTKGSRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED------- 311 L D GL + + K+G ++T EL F D+ V PVE+ Sbjct: 182 TAFLVDADTPGLIIGKKEKKMGLHGSSTRELIFE--------DMVV---PVENRLGEEGQ 230 Query: 312 -MKI-LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM-----KRAIADIAL 364 KI + LD + + V +A+A A + + Q +M + +AD+A Sbjct: 231 GFKIAMALLDDGRIGIGAQAVGIAQAAFEAALAYAQERVQFKQEIMNFQGIQFMLADMAA 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L ++ A E S+EA+ A++ + +MA V +AM+ GG GY Sbjct: 291 QLEAARLLVYQAAVRRVEGVPYSKEASMAKL-------FASEMAVKVTNDAMQIFGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 E I R+ R++ I G+ Sbjct: 344 TREYPIERYLRDAKITQIYEGT 365 >gi|311896917|dbj|BAJ29325.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054] Length = 385 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 42/299 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 T + W P S E + + +TE G+D+A I + + +DG Sbjct: 104 TEEQKRRWLPGFVSGE-------------IMTAIAMTEPGAGSDLAGIATTAKLSADGTH 150 Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQV------EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y L+G K F++ ++D +++ + + R G + L D + G R K Sbjct: 151 YVLNGAKTFITGGVLADLVLVVCRTAPYDPADRRAGLSI---LCVDTASEGYTVGRKLQK 207 Query: 279 IGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 IG R++ T EL FS+ LLG+ + T + ++ I + + + + +R Sbjct: 208 IGLRTSDTAELSFSDVKVPVENLLGEEGRAFSYLTHNLVQERLAIAVGAYASAAAAVRF- 266 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 A+ Y + R V G + + K ++AD + A A+ + + + +AA Sbjct: 267 ---AVQYVKERKVFGKAVAEFQNTKFSLADCQAQVLAQQAMVDQALELYQSGELTVADAA 323 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A++ +C + A VI + ++ GG GYI E IAR Y ++ I G+ M Sbjct: 324 AAKL-------FCTESASEVIDKCLQLHGGYGYILEYPIARLYTDNRVFRIYGGTSEVM 375 >gi|148653334|ref|YP_001280427.1| acyl-CoA dehydrogenase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572418|gb|ABQ94477.1| acyl-CoA dehydrogenase domain protein [Psychrobacter sp. PRwf-1] Length = 398 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 34/317 (10%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 S +++ ++ +H WA + E P T +G GLTE G+D ++ ++ Sbjct: 104 SAMSVQSSLVMHPIWA---YGTEAQKEKYLPKLATGEYVGCFGLTEPDAGSDPGSMKTRA 160 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 +K+ DG Y L G K W +SP++D F++ A+ EG + F++ + ++ GL +++ Sbjct: 161 KKV-DGGYQLKGSKMWITNSPIADVFVVWAKDDEGEIRGFVLEKGMK-----GLSAPKIE 214 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 K R++ T E+ + F D+ GP L+ A ++ + A Sbjct: 215 GKFSLRASITGEIVMDDVFVPEENAFPDIRGLKGP------FGCLNKARYGIAWGSMGAA 268 Query: 334 EAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 E A R++ ++P +++ +AD+ +IA + R+ DE + E Sbjct: 269 EFCWKAARQYTLDRKQFNRPLAATQLVQLKLADMQTEIALGLQAALRVGRLMDEHNAAPE 328 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 M + K C A + A + GG+G +E + RH A + G+ + Sbjct: 329 -------MISLIKRNNCGKALNIARVARDMHGGNGISDEFHVIRHVMNLEAVNTYEGTHD 381 Query: 449 AMVLDVLNLLEKGTNLF 465 L +L + G F Sbjct: 382 VHAL-ILGRAQTGIQAF 397 >gi|302521675|ref|ZP_07274017.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|318057649|ref|ZP_07976372.1| acyl-CoA dehydrogenase domain protein [Streptomyces sp. SA3_actG] gi|333024683|ref|ZP_08452747.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|302430570|gb|EFL02386.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|332744535|gb|EGJ74976.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 385 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 21/264 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251 + +TE G+D+A + + + +DG Y L+G K F++ + +D I+ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGTHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R G L L+ D G R +K+G +++ T EL F++ LLG+ N Sbjct: 184 RFGISL---LVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVKVPVADLLGEENKGFAY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + L A+ + + ++ A Y + R V G + K +A ++ A Sbjct: 241 LGQNLPQERLGIAVGAYAQAAAAVRFAQQYVQDRTVFGKPVAAFQNTKFELAACKAEVDA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A+ R + D+ + + EAA A++ +C ++A VI ++ GG GY+ E Sbjct: 301 AEAVCDRALEAHDKGELTAAEAASAKL-------FCTEVASRVIDRCLQLHGGYGYMNEY 353 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 IAR Y ++ N I G+ M + Sbjct: 354 PIARLYADNRVNRIYGGTSEVMKM 377 >gi|240274657|gb|EER38173.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H143] gi|325090994|gb|EGC44304.1| acyl-CoA dehydrogenase [Ajellomyces capsulatus H88] Length = 437 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K G Y ++G K W +S + FI+ A Sbjct: 166 PKLATNTVGSFCLSEPVSGSDAFALQTKAVKTPSG-YKINGSKMWITNSIEAGFFIVFAN 224 Query: 249 VEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 ++ G + ++E G+P G + + K+G R+++T L F + + N+ Sbjct: 225 LDPSKGYKGITAFMVEKGTP-GFSIAKKEKKLGIRASSTCVLNFDDV---EIPKENLLGE 280 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIA 360 + K I L+ + ++ LA A + R G ++ + M+ +A Sbjct: 281 EGQGYKYAINLLNEGRIGIAAQMTGLALGAWENAAKYIWNDRRQFGQLIGEFQGMQHQVA 340 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +IAAA AL + A + + ++AA A++ A ++A V A+E +G Sbjct: 341 QAYTEIAAARALVYNAARKKEAGQDFVQDAAMAKLYA-------SQVAGRVAGSAVEWMG 393 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G G++ E + +R+S +I G+ N + + +L+K Sbjct: 394 GMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKMLQK 433 >gi|114800043|ref|YP_759627.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444] gi|114740217|gb|ABI78342.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 48/282 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ K D Y ++G K F+S + SD ++++A+ + Sbjct: 124 LTEPGSGSDAASLKTKAVKEGDD-YVITGTKQFISGAGTSDVYVLMARTSDDGAKGVSAF 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVEL--------------EFSNTFGFLLGDLNVST 306 ++E +P GL + + K+G +S T ++ E + F F + L+ Sbjct: 183 IIEKDTP-GLSFGANERKMGWKSQPTRQVILDGVRVPAANRIGEEGHGFRFAMAGLDGGR 241 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 L+ A ++ G +++L +A+ YA+ R G L + + +AD+ ++ Sbjct: 242 -----------LNIAACALGGAQLALDKAVVYAKERRQFGKALAEFQNTQFKLADMETEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC-------KMAPAVIAEAMECI 419 AA + + A D AP WC A V +A++ Sbjct: 291 QAARVMLYEAAGRLDRK-------------APDATRWCAMAKRFVTDTAFKVANDALQIH 337 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 GG GY+ + + R R+ + IL G+ M + + + KG Sbjct: 338 GGYGYLADYHVERIVRDLRVHQILEGTNEVMRVIISRDMLKG 379 >gi|83717376|ref|YP_438490.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|167614960|ref|ZP_02383595.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4] gi|257141540|ref|ZP_05589802.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|83651201|gb|ABC35265.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] Length = 383 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTAARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGHGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRERKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 AR YR++ SI G+ M+ Sbjct: 350 ARTYRDTRLFSIGGGADEVML 370 >gi|289662987|ref|ZP_06484568.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 391 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 16/237 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GL+E +GG+D AA+T++ + DG + L+G K W + ++ I+ A + V FLV Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWAHTDDGVRGFLV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 E SP G Q + +K+ R++ T L N F L + G + L Sbjct: 196 ----ETYSP-GFSAQDISHKMSLRASVTSALFLDNVFVPEQMRLPEAAGLKAPLSCLNQA 250 Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 I ++ L EA+ YA R + G L + +AD+A I+ A L+ +L Sbjct: 251 RYGIAWGAIGAAVACLREALSYAGERILFGRPLAATQSAQIKLADMARRISTAQLLALQL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + R E+ + A K+ C+MA V E + +G +G E RH Sbjct: 311 GRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360 >gi|254820007|ref|ZP_05225008.1| acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 380 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 47/292 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P I S E + + + +TE G+D+A I + + D + ++G K Sbjct: 111 WLPGIISGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKT 156 Query: 234 FLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+SS ++ D +++ + + G L+ + G R K+G T EL F Sbjct: 157 FISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQDTAELAFE 216 Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 N F L+ +L P E + I AI +++G R + + + Y Sbjct: 217 NVRVPSANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETWRQTLQY 265 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A+ R G + + +A++ ++ R + + + + EA+ A Sbjct: 266 AKDRKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLQAVVDGELTAVEASKA----- 320 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+WC + A VI ++ GG GY+ E +AR Y ++ +I G+ M Sbjct: 321 --KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370 >gi|54294711|ref|YP_127126.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens] gi|53754543|emb|CAH16027.1| hypothetical protein lpl1788 [Legionella pneumophila str. Lens] Length = 389 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ Q + D Y L G Sbjct: 115 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 159 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W + P +D ++ A+ + + G + ++E G P Q+L +K+G R + T E Sbjct: 160 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 218 Query: 289 LEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 L F N G + + V ++ + ++ A V M+ + + Y Sbjct: 219 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 274 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R + + ++ +AD+ D+ A A + +A + D + ++AA + Sbjct: 275 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 328 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + ++++ +GG+GYI E R R++ I G+ Sbjct: 329 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 372 >gi|330826037|ref|YP_004389340.1| glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329311409|gb|AEB85824.1| Glutaryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 398 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 25/266 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 114 FGSEAQKQKYLPRLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172 Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A +VE + + D GL + K+G R++ T E+ + F Sbjct: 173 SPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 233 VPEENAFPEIRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 287 PLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365 >gi|326435835|gb|EGD81405.1| isovaleryl-CoA dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 429 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E G+D+ ++ + Q+ D Y L+G+K W + P +D ++ A+ + + Sbjct: 170 LAMSEPGSGSDVVSMQLRAQEDGDS-YVLNGNKFWITNGPDADVLVVYAKTDMSAHQHGI 228 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 FLV + E G + +K+G R + T EL F N +LG++N Sbjct: 229 TAFLVEKDFE-----GFSTAQKLDKLGMRGSNTCELVFENCRVPKENVLGEVNKGV---- 279 Query: 311 DMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ LD + ++G M+ ++ + Y R G + +M+ +AD+ Sbjct: 280 -YVLMSGLDLERLVLAGGPLGLMQAAVDVSFDYVHERKQFGKPIGTFQMMQAKLADMYTT 338 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 ++A A + +A D+ S++ A + + + A V +A++C+GG+GYI Sbjct: 339 LSANRAYVYSVAKKCDKGIVESKDCAGVIL-------YSAEAATKVALDAIQCLGGNGYI 391 Query: 426 EERSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 392 NDYPTGRIMRDAKLYEIGAGT 412 >gi|256111872|ref|ZP_05452833.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis bv. 3 str. Ether] Length = 322 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 26/229 (11%) Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272 + DG Y L+G K F++ +P++D F ++A+ V+G G F+V R SP GL Sbjct: 79 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 133 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327 + K+G + T + F N L+G + G MK+L L A +S Sbjct: 134 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 192 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 LA+ + YA R G + D +++ +AD +I AA + A D ++ S Sbjct: 193 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 252 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 EA+ A++ A +M V ++ GG+GY+ E +I R YR+ Sbjct: 253 TEASCAKMFA-------TEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 294 >gi|257791606|ref|YP_003182212.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella lenta DSM 2243] gi|257475503|gb|ACV55823.1| acyl-CoA dehydrogenase domain protein [Eggerthella lenta DSM 2243] Length = 379 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR 252 I LTE G+DI+AI++ DG Y ++G K F+++ + D F + A+V + + Sbjct: 119 ICFALTEPNAGSDISAISTTALPDGDG-YTINGGKIFITNGAVGDWFTVFARVVEDGQSK 177 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 CF+V R +P GL R ++K+G R + T +L F N +G V G V D Sbjct: 178 PSCFIVHRY----TP-GLVIGRKEDKMGLRGSVTSQLYFENMH---VGPEAV-VGEVGDG 228 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALD 365 + + L+ ++V+ + + A A + R G + D ++ +AD+ + Sbjct: 229 FAIAHHTLNRGRLAVAALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEIT 288 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ L + A++F + A + K +C + A A++ GG G Sbjct: 289 LEASRLLLDQAASAF------GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLC 342 Query: 426 EERSIARHYRESPANSILLGS 446 ++ + R+YR++ + +I+ G+ Sbjct: 343 KDYPVERYYRDAKSFTIVEGT 363 >gi|254284235|ref|ZP_04959203.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR51-B] gi|219680438|gb|EED36787.1| acyl-CoA dehydrogenase [gamma proteobacterium NOR51-B] Length = 367 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 116/251 (46%), Gaps = 14/251 (5%) Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268 DI +++ Q +++G+ ++G+K ++S+ ++D FI+ A++EG++ FLVP+ E Sbjct: 128 DIDNLSAHAQHVANGLK-ITGNKAYISAGAVTDYFIVTAKLEGQLALFLVPKDAE----- 181 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 GL R K G RS A + + F L+ +++ M+ L ++ ++ M Sbjct: 182 GLTVTRYKTYDG-RSAANLAFDMELPFSSLMARGDLARSAFMTMRDRAILGASAEALGAM 240 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + +L + Y R+R G L ++ +A++ + I +L + D + SE Sbjct: 241 QAALDTTVDYTRQRVQFGKPLSSFQALQHRMANMLIQIELCRSLVGAACRALD---AGSE 297 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + AR + K A V EA++ GG +E + +++ A + S Sbjct: 298 D---ARRLTLAAKVKVTSTARKVTQEAIQLHGGIATTDEYVVGHYFKRVTALESWVCSRE 354 Query: 449 AMVLDVLNLLE 459 ++D + L + Sbjct: 355 DALVDFIRLTD 365 >gi|75674806|ref|YP_317227.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gi|74419676|gb|ABA03875.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 404 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + S+ +K+SDG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPGGMKSRAEKVSDG-YRLTGSKTWISNAPIADLFVVWARSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F +LE G GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 F----VLEKGM-KGLSAPKIGGKLSLRASVTGEIVMDGVVVPEENLLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYAR----RRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S G+ + + +H AR R G L ++++ +AD+ DIA Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARTYVLERKQFGRPLAAAQLVQKKLADMQTDIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + R+ DE + E M I K C A + A + GG+G E Sbjct: 314 LGLQATLRIGRLMDEGRMTPE-------MISIIKRNNCGKALDIARAARDMHGGNGIQIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YHVMRH 372 >gi|89895064|ref|YP_518551.1| hypothetical protein DSY2318 [Desulfitobacterium hafniense Y51] gi|89334512|dbj|BAE84107.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 424 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 25/286 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV--EG----RVG 254 LTE RGG+D T+ ++ D +Y L+G K F+ + +D F++ A+ EG + Sbjct: 139 LTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKTDPEGPAHQSIS 197 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R P G+ + + +G R + F + LLG N + Sbjct: 198 AFIVDR-----GP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGAADIFYQ 251 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M I L SA ++ R +L A Y+ RR G + D + +AD + AA + Sbjct: 252 MMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITRLDAARS 311 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + D AR + K + A AV+ + M+ +GG GY I Sbjct: 312 LVYTTARAVDSGVP----GHVARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYTNVFPIE 367 Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475 R R+ I G+ M L + + E+ NL Q +LE+D Sbjct: 368 RLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNL--QFHRSLEED 411 >gi|332535048|ref|ZP_08410862.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis ANT/505] gi|332035517|gb|EGI72012.1| isovaleryl-CoA dehydrogenase [Pseudoalteromonas haloplanktis ANT/505] Length = 391 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P + ++ A+ + G + Sbjct: 132 LAMSEPNAGSDVVSMKLKAEKKGDK-YILNGNKMWITNGPDAHTLVIYAKTDLNAGAKGI 190 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + + G + +K+G R + T EL F N +LG+LN E +K+L Sbjct: 191 TAFIVESNFPGFSTAQKLDKLGMRGSNTCELVFENCEVPEENILGNLN------EGVKVL 244 Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 + LD ++ +G M+ + + Y R D P+ ++ +AD+ Sbjct: 245 MSGLDYERVVLAAGPLGIMQACMDIVVPYIHERK-----QFDTPIGQFQLIQGKVADMYT 299 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA + + +A + D ++ ++AA A + + ++A + +A++ +GG+GY Sbjct: 300 QMNAARSYVYTVAKACDRGETTRKDAAGAIL-------YAAELATKMALDAIQILGGNGY 352 Query: 425 IEERSIARHYRESPANSILLGS 446 I E + R R++ I G+ Sbjct: 353 INEYATGRLLRDAKLYEIGAGT 374 >gi|320353823|ref|YP_004195162.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122325|gb|ADW17871.1| acyl-CoA dehydrogenase domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 386 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 59/295 (20%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + PKI S EY A GLTE G+D + + + K D Y L+G K Sbjct: 111 YIPKICSGEY------------AAGSFGLTENCAGSDPSGMCTTATKDGDS-YVLNGSKI 157 Query: 234 FLSS-PMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 F++S P + F++ A + + CFL+ E G+P GL + ++K+G ++AT Sbjct: 158 FITSAPYAGVFVVWAVTDKEAPRGKGISCFLI----EAGTP-GLTIGKEEHKMGQHASAT 212 Query: 287 VELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR------------VS 331 EL F N ++G P + +I A+ ++G R + Sbjct: 213 NELIFDNCRVPASAMMGK------PNDGFRI------AVAELAGGRIGIGSLGLGIGLAA 260 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 + A YA R + + ++ IAD ++ AA L A ++ + ++EA+ Sbjct: 261 MDYAAKYANERQQFCQKISNFQAIQWMIADSYTELEAARLLLMNAAFRKEQGRPFAKEAS 320 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ A + C A++ +GG GY ++ I R+ R++ +I G+ Sbjct: 321 MAKMYATESANRACY-------NALQMLGGYGYTKDFPIERYARDARITTIYEGT 368 >gi|294633092|ref|ZP_06711651.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292830873|gb|EFF89223.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 598 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 47/322 (14%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S E T PM + + L+E + G+ +A + ++ + DG Y L G+K ++S Sbjct: 142 SSEQIDTYVRPMVEGRFTGTMCLSEPQAGSSLADVRTRAEPAGDGAYRLFGNKMWISGGD 201 Query: 240 SD-----AFIMLAQVEG------RVGCFLVPRLL--EDGSP---NGLCYQRLKNKIGNRS 283 + ++LA++ G + F+VP+ L DG+P N + L +K+G R Sbjct: 202 HELTENIVHLVLARIPGGPPGVKGLSLFIVPKYLVGPDGTPGERNDVVLAGLNHKMGYRG 261 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDSAIMSVSGMRVSLA-------- 333 L F GF G + G + E + L Y+ +M+ + + V L Sbjct: 262 TTNTLLNFGEG-GFRPGGAPGAVGHLVGEPHRGLAYM-FHMMNEARIGVGLGATALGYTG 319 Query: 334 --EAIHYARRRHVSGGI-----------LIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A+ YAR R + +I+ ++R + + A AL Sbjct: 320 YLHALDYARTRPQGRPVTAKDAAAPQVPIIEHADVRRMLLAQKSYVEGALALILYCGRLL 379 Query: 381 DEAKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 DE ++ + E R ++ PI K W + A++ GG GY E + + Y Sbjct: 380 DEQRTAATEQERDRARLLLDVLTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYDVEQFY 439 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R++ N I G+ LD+L Sbjct: 440 RDNRLNPIHEGTHGIHGLDLLG 461 >gi|228942802|ref|ZP_04105323.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975661|ref|ZP_04136202.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228784049|gb|EEM32087.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816862|gb|EEM62966.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 397 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G + C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSAGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ + D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|167579313|ref|ZP_02372187.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH] Length = 378 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW ++ VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|311747232|ref|ZP_07721017.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1] gi|126578944|gb|EAZ83108.1| glutaryl-CoA dehydrogenase [Algoriphagus sp. PR1] Length = 398 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + + + + D Y L+G K W +SP +D ++ A+ EGR+ + Sbjct: 142 FGLTEPDHGSNPSGMVTNFKDMGD-YYLLNGAKMWISNSPEADIAVVWAKNEEGRIHGLI 200 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 V R +E G NK R++ T EL F N LL + + P Sbjct: 201 VERGME-----GFTTPTTHNKWSLRASCTGELVFDNVKVPKENLLPNKSGLGAP------ 249 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L+ LDSA ++ + A + + R++ + I D+P+ +++ ++++ +I A Sbjct: 250 LMCLDSARFGIAWGAIGAAMDCYESARKYAAERIQFDKPIASFQLVQKKLSEMLTEITKA 309 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++++ +E K+++ + + K +MA + EA + GG G E Sbjct: 310 QLLAWKVGKMMNEGKAKT-------VHISMAKRNNVEMALNIAREARQIHGGMGITGEYP 362 Query: 430 IARH 433 I RH Sbjct: 363 IMRH 366 >gi|219669475|ref|YP_002459910.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] gi|219539735|gb|ACL21474.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] Length = 412 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 25/286 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-SSPMSDAFIMLAQV--EG----RVG 254 LTE RGG+D T+ ++ D +Y L+G K F+ + +D F++ A+ EG + Sbjct: 127 LTEPRGGSDFFGATTLARREGD-VYILNGQKRFVVGAEGADYFMVYAKTDPEGPAHQSIS 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R P G+ + + +G R + F + LLG N + Sbjct: 186 AFIVDR-----GP-GVEVEHIYGLMGTRGGGAGRVVFKDVKVPAENLLGVENGAADIFYQ 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 M I L SA ++ R +L A Y+ RR G + D + +AD + AA + Sbjct: 240 MMIPERLTSAAGALGMARAALEVASDYSTRRKAFGRKIKDFQGVNFKVADSITRLDAARS 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + D AR + K + A AV+ + M+ +GG GY I Sbjct: 300 LVYTTARAVDSGVP----GHVARRLVSEAKKFATDSAWAVVNDGMQIMGGIGYTNVFPIE 355 Query: 432 RHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTLEQD 475 R R+ I G+ M L + + E+ NL Q +LE+D Sbjct: 356 RLLRDIRLIMIWTGTNEVMNLIIQHEYYKERRGNL--QFHRSLEED 399 >gi|217968850|ref|YP_002354084.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gi|217506177|gb|ACK53188.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 378 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 +TE G+D+A I ++ +++ G Y L+G K W ++ +++ ++ A+ G Sbjct: 121 FAMTEPGAGSDVAGIRTRAERVEGG-YRLTGSKIWISNANLAEFCVVFAKTAPDGGHRGM 179 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVST 306 F+VPR + GL K+G R + T E+ F G G ++ Sbjct: 180 SAFIVPR-----ASAGLTVGEPLGKLGQRCSPTCEVFLDQVFVPEDHRLGEEGGGFALAM 234 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + + ++ A V + L E++ YA +R G LID + +A++ + + Sbjct: 235 AVFDHSRPMV----AAFGVGLIERCLDESLAYATQRSSMGKRLIDHQAVAHKLAEMRMKL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+++ A D+ + + EA+ I K + A EA++ GG GY Sbjct: 291 EAARLLTYQSAWLLDQGRPNTIEAS-------IAKAFAADAAMWAATEAVQIFGGMGYST 343 Query: 427 ERSIARHYRESPANSILLGS 446 E + + +R++ I G+ Sbjct: 344 EYPVEKLFRDAKVLQIYEGT 363 >gi|110681089|ref|YP_684096.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] gi|109457205|gb|ABG33410.1| glutaryl-CoA dehydrogenase [Roseobacter denitrificans OCh 114] Length = 407 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K G Y L+G K W +SP++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTPTG-YKLTGSKMWISNSPIADVFVVWAKSEAHGGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ NK+ R++ T E+ LL ++ GP Sbjct: 208 FILEKGMK-----GLSAPKVGNKLSLRASVTGEIVMDGVEVGEDALLPNVQGLKGP---- 258 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y RH G + + ++ +AD+ +IA Sbjct: 259 --FGCLNRARYGISWGVMGAAEFCWHAARQYGLDRHQFGKPIAGTQLFQKKLADMQTEIA 316 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S ++ D A++ E M I K C A V + + GG+G E Sbjct: 317 LGLQGSLQVGRLMDSAQAAPE-------MISIMKRNNCGKALDVARMSRDMHGGNGISGE 369 Query: 428 RSIARH 433 + RH Sbjct: 370 FQVIRH 375 >gi|327297831|ref|XP_003233609.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] gi|326463787|gb|EGD89240.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] Length = 540 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 322 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435 Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416 A SF L N + ++ E+AA R+ I T +C + A + Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR+ A +I GS M+ Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522 >gi|301512949|ref|ZP_07238186.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB058] Length = 372 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDNHYLLNGAKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|149914733|ref|ZP_01903263.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b] gi|149811526|gb|EDM71361.1| acyl-CoA dehydrogenase [Roseobacter sp. AzwK-3b] Length = 380 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 28/265 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ + ++G Y L+G K F+S SDA+I++ + +G G + Sbjct: 124 LTEPGSGSDAAALKTRAGRSNEG-YILNGTKAFISGGGYSDAYIVMVRTGEDGPRGISTI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 +EDG+P GL + L++K+G RS T +++F ++ E+ K Y Sbjct: 183 --YVEDGTP-GLSFGGLEDKMGWRSQPTAQVQFDEC------NIPAQNLVGEENKGFSYA 233 Query: 318 --------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A S+ + +L + Y R G + ++ +AD+ + + AA Sbjct: 234 MAGLDGGRLNIAACSLGAAQQALDMTLTYMGERKAFGKPIDQFQALQFRLADLEIQLQAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D A A + K + + ++ + ++ GG GY+ + Sbjct: 294 RTFLRQAAWKLDTG------APDATKFCAMAKKFVTEAGSNIVNQCLQLHGGYGYLADYG 347 Query: 430 IARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 348 IEKLVRDLRVHEILEGTNEIMRLIV 372 >gi|172063916|ref|YP_001811567.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996433|gb|ACB67351.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 377 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCAITFENC---AIPEENLLGNRGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLVDYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|108799585|ref|YP_639782.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119868695|ref|YP_938647.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108770004|gb|ABG08726.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119694784|gb|ABL91857.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length = 611 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 48/299 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + SDG + ++G K F+S + D ++LA+ +G Sbjct: 164 LTEPDAGSDVGAGVTKAVEQSDGTWHITGVKRFISGGDVGDTAENIFHLVLARPQGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG 300 + F VP+ L D S NG+ +++K+G +S+ T E+ F G+L+G Sbjct: 224 TKGLSMFFVPKHLFDPATMQITSRNGVYVTGVEHKMGIKSSPTCEITFGRDQPAIGWLVG 283 Query: 301 DLNVSTGPVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL--------- 349 D V G + K++ + + +MS + A+ YA+ R + G L Sbjct: 284 D--VHNGIAQMFKVMENARMGTGVMSTGMLSTGYLSALDYAKTR-IQGPDLTRTSDKTAP 340 Query: 350 ----IDQPVMKRAI------ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI---M 396 I P ++R++ A+ + TA+ + S +E A+I + Sbjct: 341 RVPIIRHPEVRRSLLTQKSYAEGLRALYLFTAVHQDAVPQLARSVSHAEPELAAKINDLL 400 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 P+ K + A + +++ GGSGY+++ + ++ R+ N++ G+ D+L Sbjct: 401 LPVVKAVSSERAYDTLKLSLQMFGGSGYLQDYPMEQYVRDCLINTLYEGTTAIQAQDLL 459 >gi|17989368|ref|NP_542001.1| acyl-COA dehydrogenase, short-chain specific [Brucella melitensis bv. 1 str. 16M] gi|17985240|gb|AAL54265.1| acyl-CoA dehydrogenase, short-chain specific [Brucella melitensis bv. 1 str. 16M] Length = 456 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%) Query: 221 ISDG-IYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG--CFLVPRLLEDGSPNGLCY 272 + DG Y L+G K F++ +P++D F ++A+ V+G G F+V R SP GL Sbjct: 213 VRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADGISAFIVER----NSP-GLSL 267 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSG 327 + K+G + T + F N L+G + G MK+L L A +S Sbjct: 268 GKPDQKMGQKGALTSNVIFENVRVPASQLIGGVE-GKGFKTAMKVLDKGRLHIAALSTGA 326 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 LA+ + YA R G + D +++ +AD +I AA + A D ++ S Sbjct: 327 AERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVS 386 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 EA+ A K + +M V ++ GG+GY+ E +I R YR+ Sbjct: 387 TEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRD 428 >gi|330820005|ref|YP_004348867.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3] gi|327372000|gb|AEA63355.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3] Length = 377 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + DG + L+G K F+S+ ++ F M +G+ G Sbjct: 125 LTEPQAGSEANNLRTRA-VLQDGRWVLNGSKQFISNASRAGVAIVFAMTDPEQGKRGLSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G + + K+G R++ T + N + + N+ E +KI Sbjct: 184 FIVP----TDTP-GFNVGKPEKKLGIRASDTCPITLENC---AIPEENLLGARGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ V +A A RR+ + +P+ + +AD+A + AA Sbjct: 236 LANLEGGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIKEHQAIAEKLADMATQLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A E EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAARLRTEGLPCLSEASQAKLFAS-------EMAEKVCSDAIQVHGGYGYLADYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|239983589|ref|ZP_04706113.1| putative acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 922 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 21/244 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV-EGRVGCFLVP 259 LTE G+D +++++ ++ G + + G K F+++ ++D ++ A+ E + FLVP Sbjct: 664 LTEPGTGSDAGSVSTRARR-DGGDWVIDGAKIFITNGTVADVALVFARTGEKGLTAFLVP 722 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYL 318 SP G + K+G R AT EL G + D + I L L Sbjct: 723 ----TDSP-GFTATEIHGKLGLRGQATAELTLE---GVRVPDTARLGEEGRGLGIALGTL 774 Query: 319 DSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 +SV+ V LA+ A+ YA+ R G + +++ +AD +D+ A L+ Sbjct: 775 SRGRISVAAGAVGLAQGAVDAAVRYAKERTQFGKPIASFQLVQELLADSEVDVRTARLLT 834 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++A D S E A A + KY + A V ++ GG GYI+E + ++ Sbjct: 835 HQVARMADAGASPKEYATDASV----AKYHASEAAVRVSNNCLQVFGGYGYIDEYPVGKY 890 Query: 434 YRES 437 R++ Sbjct: 891 LRDA 894 >gi|227539772|ref|ZP_03969821.1| possible acyl-CoA dehydrogenase, long-chain specific [Sphingobacterium spiritivorum ATCC 33300] gi|227240414|gb|EEI90429.1| possible acyl-CoA dehydrogenase, long-chain specific [Sphingobacterium spiritivorum ATCC 33300] Length = 187 Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 18/156 (11%) Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 FG+L+G L + L +AI S+S +L + Y +R G L+D V Sbjct: 31 FGYLMGGLQLER-----------LTAAIQSISTADSALQYTLAYIDKREAFGKKLMDFQV 79 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ IA + DIA A + + + YA I K ++A ++ E Sbjct: 80 LRHRIAQMVADIATTKAFVYHCCD-------LQQRGDYAVQECSIAKLQSSELAIKIVHE 132 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG G+ E+ I+R YR+ +I+ G+ M Sbjct: 133 CLQLFGGYGFTEDYKISRLYRDVRVGTIIGGTSEIM 168 >gi|113866203|ref|YP_724692.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] gi|113524979|emb|CAJ91324.1| Acyl-CoA dehydrogenase, short-chain specific [Ralstonia eutropha H16] Length = 376 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE G+D +A+ + + D Y L+G K F++S +D I+LA Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-YVLNGVKQFITSGQNADVAIVLAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + G F+VP S G RL++K+G S+ T ++ F +N G Sbjct: 170 TDKAAGKRGISAFIVPT-----STPGYVVARLEDKLGQHSSDTAQILFEDCRVPAANLLG 224 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 G ++ +E +I I A S+ R + A+ YA+ R G L ++ Sbjct: 225 DEGGGYKMALSGLEGGRIGI----ASQSIGMARAAFEAALAYAKERESFGQPLFQHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A I A + + A D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLAEMATRIDVARQMVWHAAALRDAGRPCLKEAAMAKLFA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|163846607|ref|YP_001634651.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524403|ref|YP_002568874.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667896|gb|ABY34262.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448282|gb|ACM52548.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl] Length = 389 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 37/262 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF--LV 258 LTE G+D A I + ++ D + ++G K W + +D ++ A + +G + Sbjct: 125 LTEPNAGSDAAHIQTTAERRGDE-WVINGQKMWITNGSFADVIVVFAATDKNLGARGGIT 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILI 316 ++E P G +++ K+G R++ T L F D V P E++ ++ + Sbjct: 184 AFIVEKTMP-GFRVGKVEEKMGLRASHTASLYFE--------DCRV---PAENVLGQVGM 231 Query: 317 YLDSAIMSVSGMRVSLA--------EAIHYARR----RHVSGGILIDQPVMKRAIADIAL 364 A+ ++ R L EA +RR RH G + + ++ +AD+A+ Sbjct: 232 GFPLAMRTLDIGRCGLGASSIGSAKEAFELSRRYMVERHQFGRPIAEFQALQFKLADMAV 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + + A D + + E++ I K +C +MA +I EA++ GG G+ Sbjct: 292 KLYTMEQIVYDCARRVDAGQQATLESS-------IVKLYCTEMASQIIDEAIQIHGGMGF 344 Query: 425 IEERSIARHYRESPANSILLGS 446 E + R YR++ I G+ Sbjct: 345 SRELPLERMYRDARVTRIFEGT 366 >gi|170748892|ref|YP_001755152.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655414|gb|ACB24469.1| acyl-CoA dehydrogenase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 414 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 56/299 (18%) Query: 184 DPTNKAPMQKTSVA---IG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 DP +A + + S IG + L+E G+D+A + ++ + D +W + Sbjct: 118 DPDRRAELLRRSARGQWIGSISLSEPDAGSDLAGVQTRAVRDGDRWRLTGTKRWAGFAKG 177 Query: 240 SDAFIMLAQV------EGRVGCFLVPRLL---EDGSPNGLCYQRLKNKIGNRSNATVELE 290 +D +LA+ E R L P L+ D P G+ R+ +KIG T EL Sbjct: 178 ADFIEVLARTRDPEPGEPR-SAGLEPFLVLKERDSFPPGVT-GRVIDKIGYHGFQTFELR 235 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR---------- 340 L D+ V P D +Y D + SG ++ ++ AR Sbjct: 236 --------LEDVCV---PESDRLTGLYGDQGADADSGGFAAVQRGLNIARVHTAARAVGV 284 Query: 341 -------------RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R G + D ++ A+AD+A D+A A A ++A+ D+ + Sbjct: 285 ARAAVEDCQSYLQERVQFGHPIGDFQALRFALADMAADVAQARAFWHQVAHLLDQGEPAE 344 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 E+A +++A +MA V +AM+ GG+GY ER + R++R++ +I G+ Sbjct: 345 SESAMVKLLA-------TEMAVRVTNQAMQLHGGNGYTTERRVERYWRDARLTTIFEGT 396 >gi|93006342|ref|YP_580779.1| butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5] gi|92394020|gb|ABE75295.1| Butyryl-CoA dehydrogenase [Psychrobacter cryohalolentis K5] Length = 386 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ K + Y L+G K F+S S +++ G G + Sbjct: 124 LTEPNAGSDAASLRTKADKQGE-YYVLNGEKTFISGAGSTDVLVVMARTGAAGPKGISAF 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKI 314 + D G+ Y + ++K+G ++ T + F N G ++ ++ +I Sbjct: 183 VVDADSAGIEYGKNEHKMGWKAQPTRTISFKDVKVPVENLIGEEGQGFRIAMKGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I I +V + +L A +Y + R G + ++ +AD+ A + + Sbjct: 243 NI----GICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLY 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A+ D + ++ + Y + ++ C +A EA++ GG GY+ E + RH Sbjct: 299 LAASKVD--NNDAQASTYCAMAKRLSTDLCFDVAN----EALQLHGGYGYLNEYPLERHV 352 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 RDLRVHQILEGTNEIM 368 >gi|167741559|ref|ZP_02414333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] Length = 543 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 16/270 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q++ G + +SG K W SS + + A+ G LV Sbjct: 9 LTEPDAGSNARAIASVAQRVDGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGLVGL 66 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 67 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARMSDACRLGAPGQGMAVAQQTMNFAR 125 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 126 LGIGAVCVGAMK-RCAQLMHRYAARRRIGIGLLLDHPLSRQRLGDLRHRIDALSALIEQL 184 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 185 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 238 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465 + I G ++ + + LL G +L Sbjct: 239 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 268 >gi|148263656|ref|YP_001230362.1| acyl-CoA dehydrogenase domain-containing protein [Geobacter uraniireducens Rf4] gi|146397156|gb|ABQ25789.1| acyl-CoA dehydrogenase domain protein [Geobacter uraniireducens Rf4] Length = 592 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + +DG Y L+G K F+++ ++ + + A+++ FLV Sbjct: 147 LTEPDSGSDALGAKTTATLSADGKYYLLNGTKQFITNGSFANLYTIFAKIDKEHFTAFLV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R E GL + K+G + ++T ++ N +LG++ ++ + Sbjct: 207 ERTTE-----GLSVGAEEQKLGIKGSSTTQIILENAKVPVENVLGEIGKGHKIAFNVLNV 261 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + +LAE I YA R G + +K IA+++ + AA +L +R Sbjct: 262 GRFKLGAGVTGAAKYALAEGIRYANMRKQFGVPIGTFGAIKEKIANLSAAVFAAESLVYR 321 Query: 376 LA---------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 LA N +D + EE A I I K +C ++ V+ E ++ G Sbjct: 322 LAGLIDHKLATIPKDTSNYYDVYQKGIEEYA---IECAIAKVFCSEVLSDVVDEVVQIHG 378 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G G+I+E YR+ N I G+ Sbjct: 379 GYGFIQEYPAEGFYRDERINRIFEGT 404 >gi|302653360|ref|XP_003018507.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517] gi|291182158|gb|EFE37862.1| hypothetical protein TRV_07453 [Trichophyton verrucosum HKI 0517] Length = 540 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GGPGM 322 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435 Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416 A SF L N + ++ E+AA R+ I T +C + A + Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR+ A +I GS M+ Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522 >gi|302523290|ref|ZP_07275632.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|302432185|gb|EFL04001.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] Length = 390 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA++++ + D + L+G K F+S + ++ G G + Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L D GL + ++K+G + T V + G ++ + ++ Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ G R +L ++ + R G LI+ ++ +AD+A ++AAA AL Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A++ D ++ + + + K + + A++ GG GY+ E I + Sbjct: 308 QAADALDRKNPQAPQ------LIAMAKRFATDSGFQIADRALQLHGGYGYLHEYGIEKIV 361 Query: 435 RESPANSILLGSGNAM 450 R+ + IL GS M Sbjct: 362 RDLRVHQILEGSNEIM 377 >gi|186472405|ref|YP_001859747.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184194737|gb|ACC72701.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 393 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + QK D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRAQKKGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F N +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS--VSGMRVSLAEA-IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ +G+ +++ +A + Y R G + + +++ +AD+ + A A Sbjct: 245 LDYERAVLAGGPTGIMLAVMDAVVPYIHDRKQFGQSIGEFQLIQGKVADLYTTLQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D S A R + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRQLDTLGSG--HARQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|92114762|ref|YP_574690.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] gi|91797852|gb|ABE59991.1| acyl-CoA dehydrogenase-like protein [Chromohalobacter salexigens DSM 3043] Length = 593 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 39/293 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSD-----AFIMLAQV---- 249 + LTE + G+D++ + ++ + DG Y L G K F++ D ++LA++ Sbjct: 161 MNLTEPQAGSDLSVVRTR--AVPDGAHYRLHGQKIFITWGEHDCAENIVHLVLARLPDAA 218 Query: 250 EGRVGC--FLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLL 299 EG G FLVP+ L D G N + L++K+G + T L F G+L+ Sbjct: 219 EGNQGISLFLVPKRLVDAQGRLGERNDVNCVSLEHKLGIHGSPTCMLGFGERDGAIGYLV 278 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----------L 349 G+ + M I + + +A+ YAR R V G + L Sbjct: 279 GEPGRGLAHMFTMMNAARHKVGIQGIGVAERAYQQALAYARER-VQGRVPKSRGGGSATL 337 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAK----SRSEEAAYARI--MAPITKYW 403 I+ ++R + + + A AL+ A+ D A+ + + E A R+ PI K + Sbjct: 338 IEHYDVRRMLLSMRARLEALRALALLSASEMDIARHAESTEARERAQQRVDLYTPIVKAF 397 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + + A++ GG GYIEE +A+H R++ I G+ LD++ Sbjct: 398 STDQAVDIASLAVQVHGGMGYIEETGVAQHLRDARIAPIYEGTNGIQALDLVT 450 >gi|89902271|ref|YP_524742.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89347008|gb|ABD71211.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 388 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 44/288 (15%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + L +TE GGTD++A+ + + D Y + G K F++S M +D F + + Sbjct: 116 PVLRGEKIAALAITEPGGGTDVSALRTTARLEGD-EYVVDGDKIFITSGMRADWFTVAVR 174 Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 + G + +VP G GL LK K+G + T +L F +L+ Sbjct: 175 TDLKDKGPGGISMLMVP-----GDAPGLSRSPLK-KMGWLCSDTAQLRFDGVRVPAHYLV 228 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 G+ IL + +S++ M + +E A+ +AR+R G L+D V Sbjct: 229 GEEGAGF-----KMILTNFNGERLSMAAMALGFSECCYDEALAWARQRKTFGMALVDHQV 283 Query: 355 MKRAIADIALDI----AAATALSFRLANSFDEAKSRSEEAAYARIM---APITKYWCCKM 407 ++ + D+ + I A A+S R A+S D+A +E A ++ A T +C Sbjct: 284 IRHKLMDMKMRIESTRAWLNAVSAR-ADSGDKAAKGAEWVAQVCLLKNHATQTMQFCAD- 341 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++ +GG G++ + R YRE +++G G ++ L Sbjct: 342 ------QGVQILGGMGFMRGVACERIYRE--VKVMMIGGGTEEIMKEL 381 >gi|28900473|ref|NP_800128.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|260877426|ref|ZP_05889781.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034] gi|260898907|ref|ZP_05907348.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466] gi|28808853|dbj|BAC61961.1| putative acyl-CoA dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|308089196|gb|EFO38891.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus Peru-466] gi|308090699|gb|EFO40394.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AN-5034] Length = 389 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + S G + +K+G R + T EL F+N +LG LN VE + Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ +AD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + ++A + +A++ +GG+GYI E + R Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQIALDAIQLLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|260061799|ref|YP_003194879.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501] gi|88785932|gb|EAR17101.1| acyl-CoA dehydrogenase [Robiginitalea biformata HTCC2501] Length = 380 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 31/287 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W + + E P T IG L+E G+D + + + D Y L+G K Sbjct: 96 WGLEAYGTEEQKQKYLPALATGEKIGAFCLSEPEAGSDATSQKTTAKDAGDH-YVLNGTK 154 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + +D ++++AQ G + L+ + G + K+G R + T L F Sbjct: 155 NWITNGNSADIYLVIAQTYPEKGHKGINALIVEKGMEGFEIGPKEQKLGIRGSDTHSLNF 214 Query: 292 SNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 ++ FGF +S G +I I + ++ +SL Y+ Sbjct: 215 NDVKVPKENRIGADGFGFKFAMKTLSGG-----RIGIAAQALGIAAGAYELSL----KYS 265 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 + R G + + + +AD+ I AA L +R A K R E + MA Sbjct: 266 KERKAFGTEIANHQAIAFKLADMHTQIEAARMLVYRAATD----KDRGENYDLSGAMA-- 319 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + ++A EA++ GG+GY++E + R R++ I G+ Sbjct: 320 -KLYASQVAMDTAVEAVQIHGGNGYVKEYHVERLMRDAKITQIYEGT 365 >gi|326922425|ref|XP_003207449.1| PREDICTED: LOW QUALITY PROTEIN: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Meleagris gallopavo] Length = 455 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 39/280 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ M D I++ Sbjct: 184 PQMAAGKCIGAIAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKTFITNGWMCDVVIVV 241 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---------- 294 E R + L + G R KIG ++ T EL F + Sbjct: 242 TVTNREARSPAHGISLFLVENGTKGFTKGRKLEKIGLKAQDTAELFFEDVRLPASALLGK 301 Query: 295 ----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 F +L+ +L P E + I A M+++G E +Y R+R G + Sbjct: 302 ENKGFYYLMAEL-----PQERLLI------ADMALAGCEFMFEETRNYVRQRKAFGKTVA 350 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++ +A++ +I A D E A + KYW + + Sbjct: 351 HLQTVQHKLAEMKTNICVGRAF-------LDNCLELHSEKRLDSPTASMAKYWASDLQNS 403 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V + ++ GGSGY+ E IA+ + ++ I G+ M Sbjct: 404 VATQCVQMHGGSGYMWEYPIAKAFVDARVQPIYGGTNEIM 443 >gi|160897650|ref|YP_001563232.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160363234|gb|ABX34847.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 398 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 29/268 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D +++S+ K+ DG Y L G+K W + Sbjct: 114 FGTEDQKNKYLPKLASGEFIGCFGLTEPDHGSDPGSMSSRAYKV-DGGYRLKGNKMWITN 172 Query: 237 SPMSDAFIMLAQ---VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 SP++D F++ A+ +G VG + + D GL + K+G R++ T E+ + Sbjct: 173 SPVADVFVVWAKEVTEDGHVG--EIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDD 230 Query: 294 TF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVS 345 F ++ GP L+SA ++ + AE A Y R Sbjct: 231 VFVPEENAFPEVRGLKGP------FTCLNSARFGIAWGALGAAEFCWHTARQYTLDRKQF 284 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 285 GRPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLIKRNNC 337 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 338 GKSLDIARMARDMMGGNGISDEFGVARH 365 >gi|254384727|ref|ZP_05000065.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194343610|gb|EDX24576.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 385 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 45/274 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251 L +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGSKTFITGGVHADRVIVCARTSAPREDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L D G R +K+G R++ T EL F D+ V PVED Sbjct: 184 RFGISL---FAVDTKSEGYSIGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229 Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356 + K YL + + S G AI +A++ +V+ + +PV K Sbjct: 230 LMGEENKGFYYLGANLPSERWGIAFGAYAQAKAAIRFAQQ-YVTERTVFGKPVAHFQNTK 288 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A ++ AA A++ R + D + + EAA A++ +C ++A VI + + Sbjct: 289 FELAACQAEVDAAEAVADRALEALDAGELTAAEAASAKL-------FCTEVAHRVIDKCL 341 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E IAR Y ++ N I G+ M Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375 >gi|150376805|ref|YP_001313401.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium medicae WSM419] gi|150031352|gb|ABR63468.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae WSM419] Length = 395 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE G+D A + ++ + G + W ++P++D F++ A+ E + Sbjct: 137 FGLTEPDAGSDPAGMKTRAIRTEGGYRLIGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316 +LE G+ GL ++ K+ R++ T E+ N G LL D+ GP Sbjct: 196 FVLEKGT-KGLSAPKIAGKLSLRASITGEIVLDNVEVGEEALLPDVEGLKGP------FG 248 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE + E M I K C A + +A + GG+G EE + Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGISEEYQVM 361 Query: 432 RH 433 RH Sbjct: 362 RH 363 >gi|34499594|ref|NP_903809.1| acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34105445|gb|AAQ61800.1| probable acyl-CoA dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 128 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/47 (53%), Positives = 33/47 (70%) Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 CF VPR DGS N + QRLK+K+GN SNA+ E+E + +G L+GD Sbjct: 26 CFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEVESHDAWGVLIGD 72 >gi|83771139|dbj|BAE61271.1| unnamed protein product [Aspergillus oryzae] Length = 559 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 17/302 (5%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK+ K + LG+TE G+D+A I++ ++ Sbjct: 255 IARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEPDAGSDVANISTTARRE 301 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 D +Y ++G K ++++ + + A G G + L+ + G+ +R+ N + Sbjct: 302 GD-VYVVNGAKKWITNGIWADYCTAAVRTGGPGKGGISLLVIPLAAPGVTRRRMYNSGVH 360 Query: 282 RSNAT-VELE-FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 S +T +EL+ L+G+ N + L A S+ RV +A HYA Sbjct: 361 ASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLACASLRLARVCAEDAFHYA 420 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 +R G LI + ++ I L I A A +L N + K R + M + Sbjct: 421 TQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIELTKDRPTDDVRIGGMTAL 480 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLL 458 K + + EA + +GG+GY + AR + S A ++G G+ ++ L L Sbjct: 481 LKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLALQ 540 Query: 459 EK 460 E+ Sbjct: 541 EE 542 >gi|254245716|ref|ZP_04939037.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124870492|gb|EAY62208.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 609 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 70/361 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSD-----AFIMLAQV--- 249 L+E + G+ ++ I ++ D Y L+G+K ++S + ++LA++ Sbjct: 163 LSEPQAGSSLSDIATRADFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222 Query: 250 EGR-------VGCFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEF----- 291 GR + F+VP+ L DG NG + L +K+G R L F Sbjct: 223 HGRLLPGTRGISLFIVPKFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340 + G+L+G N + M ++ A + V V+L A+ YAR Sbjct: 283 YRPEGRAGAIGYLVGRPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337 Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R + ++D P ++R + + AL+ A DEA++ Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHD 397 Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A A I+ PI K W + A A++ GG GY + ++ R YR++ N Sbjct: 398 DAAVRAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501 I G+ LD+L K T L+ +G++ ++ + C++ LA Sbjct: 458 IHEGTHGIQALDLLG--RKVTQDDGASLRALDARIGATVERARAL---DAGACEQADALA 512 Query: 502 R 502 R Sbjct: 513 R 513 >gi|257076973|ref|ZP_05571334.1| acyl-CoA dehydrogenase [Ferroplasma acidarmanus fer1] Length = 359 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 39/267 (14%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251 K +GLG+TE GG+D+A + + +K + Y L+G K F+++ ++D ++LA+ Sbjct: 101 KGKYILGLGVTEPSGGSDVAGLKTTAKKQGNK-YILNGSKMFITNGSIADYLVVLARTSE 159 Query: 252 R------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + FLV L+ G +L +K+G R+ T EL+F+N +L+ Sbjct: 160 DSNPHHGLSTFLVNTKLK-----GFKANKLVDKLGVRATNTAELQFNNI------ELSED 208 Query: 306 TGPVEDMK----ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E+ K I+++ + + + V+ + +A + ++ + D+ M R ++D Sbjct: 209 DLIGEEGKGFYYIMMFFNISRIYVAAQSLGIARGAFDKIKSYIKENNIKDEESMFR-LSD 267 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI--------- 412 + I A +++ A E K + E + A+ T + + A ++ Sbjct: 268 VGTRIEATRQMTYNAATYLFEFKPKPELTSMAKAYGSETAVYAAESAMEILGDHSAYEDV 327 Query: 413 ------AEAMECIGGSGYIEERSIARH 433 A+ ME G+ IE+ IAR+ Sbjct: 328 QRIFRNAKIMEIWEGTSEIEKLVIARY 354 >gi|53717700|ref|YP_106686.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126439356|ref|YP_001057126.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|134281361|ref|ZP_01768069.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|167717438|ref|ZP_02400674.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98] gi|167822097|ref|ZP_02453568.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 9] gi|167892182|ref|ZP_02479584.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894] gi|167900692|ref|ZP_02487897.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177] gi|167916952|ref|ZP_02504043.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215] gi|226193156|ref|ZP_03788766.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237814461|ref|YP_002898912.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia pseudomallei MSHR346] gi|254184131|ref|ZP_04890722.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|254186597|ref|ZP_04893114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254194723|ref|ZP_04901154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|254261872|ref|ZP_04952926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] gi|254298603|ref|ZP_04966054.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|52208114|emb|CAH34044.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|126218849|gb|ABN82355.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|134247028|gb|EBA47114.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|157808578|gb|EDO85748.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|157934282|gb|EDO89952.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|169651473|gb|EDS84166.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|184214663|gb|EDU11706.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|225934756|gb|EEH30733.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237505530|gb|ACQ97848.1| long-chain specific acyl-coa dehydrogenase, (lcad) [Burkholderia pseudomallei MSHR346] gi|254220561|gb|EET09945.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] Length = 378 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW + VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|307265587|ref|ZP_07547141.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919385|gb|EFN49605.1| acyl-CoA dehydrogenase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 380 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K LTE GTD AA Q + +G Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAAA--QQTTAVLEGDHYILNGSKIFITNGGKADVYIVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + + + G +++ K+G R + EL F + ++ N+ Sbjct: 171 MTDKSKGTKGISAFIVEKDFPGFYIGKVEEKMGIRGSRAAELVFEDC---VVPKENLLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 E KI ++ LD + + + +A+A Y + R G + ++ IA+ Sbjct: 228 EGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAE 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A +AA L + A S + EAA A++ A T A V +A++ GG Sbjct: 288 MATKASAARHLVYYAAWRKQNNLSYTMEAAMAKLFASET-------AMEVTTKAVQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLE 459 GY ++ + R R++ I G+ + + LNLL+ Sbjct: 341 YGYTKDYPVERLMRDAKITEIYEGTSEVQKMVIALNLLK 379 >gi|254720530|ref|ZP_05182341.1| acyl-CoA dehydrogenase [Brucella sp. 83/13] gi|265985561|ref|ZP_06098296.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306838102|ref|ZP_07470959.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653] gi|264664153|gb|EEZ34414.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306406839|gb|EFM63061.1| acyl-CoA dehydrogenase [Brucella sp. NF 2653] Length = 375 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 30/273 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 + + R YR+ I G+ + L + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRLVIARRL 375 >gi|195375919|ref|XP_002046745.1| GJ12313 [Drosophila virilis] gi|194153903|gb|EDW69087.1| GJ12313 [Drosophila virilis] Length = 424 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 51/298 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 143 TPEQKQKYLPKLCSGEHIG-------------GLAMSEPGAGSDVVSMKLRAERKGD-YY 188 Query: 227 CLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKI 279 L+G K+++++ +DA ++ V + G VP ++E G Q+L +K+ Sbjct: 189 VLNGTKFWITNG-ADAETLI--VYAKTGASGVPDRHAITAFIVETGWEGFSVAQKL-DKL 244 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSGM 328 G R ++T EL F DL V V E+ + + + A V M Sbjct: 245 GMRGSSTCELVFQ--------DLKVPAKNVLGQENKGVYVLMSGLEFERLVLAAGPVGLM 296 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 + + A YA +R G ++ + +++ +AD+ ++A + + +A S D A RS Sbjct: 297 QAACDVAFDYAHQRKQMGKLIGEFQLIQGKMADMYTTLSACRSYLYAVARSCD-AGVRSS 355 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ +C + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 356 KDCAGVIL------YCAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 407 >gi|118466132|ref|YP_881782.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254819998|ref|ZP_05224999.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] gi|118167419|gb|ABK68316.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 384 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 41/309 (13%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + + P++ S E T + LTE GG+D+ Sbjct: 87 MGGHTVVAKLISLYGTEEQKQKYLPRMASGEMRAT-------------MALTEPGGGSDL 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266 A+T+ + + + W ++ S +L + + + G +V L+E G Sbjct: 134 QAMTTTARAEGNELVINGAKTWISNARRSGLIALLCKTDPQAQPRHKGISIV--LVEHG- 190 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLD 319 GL R K+G + + EL F +LGD G + MK L I + Sbjct: 191 -QGLTVSRDLPKLGYKGVESCELSFDECRVPAAAILGD-EPGRGFAQMMKGLETGRIQVA 248 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 S + V+ +L +A+ YA+ R G + + +AD+A + AA L+ A Sbjct: 249 SRALGVAS--AALEDALKYAQERESFGQPIWKHQSVGNYLADMATKLTAARQLTRYAAEK 306 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D + EA A++ A ++A + A+ GG GY E + R++R++P Sbjct: 307 YDSGERCDMEAGMAKLFA-------SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL 359 Query: 440 NSILLGSGN 448 +++G G Sbjct: 360 --MIVGEGT 366 >gi|89099730|ref|ZP_01172603.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89085477|gb|EAR64605.1| butyryl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 588 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 35/268 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + + + G Y L+G K +++ + SD FI+ A+V+G+ Sbjct: 147 LTEPNAGSDALSSQTVARLNEAGTHYILNGTKLYITNAAFSDTFIVYAKVDGKD---FTA 203 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDM 312 +LE P GL +NK+G + ++T E+ N G G V + Sbjct: 204 FILEKDFP-GLVLGPEENKMGIKGSSTRSVILEDCEVPAENMLG------EQGKGHVIAL 256 Query: 313 KIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +L L SA M + + SL +A Y + R G + D K + +A I A Sbjct: 257 NVLNLGRFNLGSACMGAA--KYSLKKAAQYTQERRQFGRKIADFHATKEKVGKMAARIYA 314 Query: 369 ATALSFRLANSFDEA-----KSRSEEAAYARIMAPITKYWCCKMAPA-----VIAEAMEC 418 + ++ +R A +EA S A R+ ++ CK+ + E ++ Sbjct: 315 SESMQYRTAGLLEEALGDVWDSPDSRLAGKRMSEYASECAVCKVFGSETLDYAADETLQL 374 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG+G+I+E I + YR+S N I G+ Sbjct: 375 YGGAGFIKEYGIEQIYRDSRINRIFEGT 402 >gi|110635619|ref|YP_675827.1| acyl-CoA dehydrogenase-like [Mesorhizobium sp. BNC1] gi|110286603|gb|ABG64662.1| acyl-CoA dehydrogenase-like protein [Chelativorans sp. BNC1] Length = 388 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 14/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + +TE + G+D+A I S+ + +S G Y L+G K W ++ ++D ++ A++ V Sbjct: 121 IAVTEPQNGSDVAGIKSRARAVSGG-YLLNGAKIWCTNAAVADFIVVGAKLGDDDSRHAV 179 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + +GL ++K+G R + L F + F L + G K ++ Sbjct: 180 NLFIVQKGTSGLTIGPKEDKLGARGLPSCPLFFEDVFVPEENRLGGNDGG--GFKAVMAG 237 Query: 319 DSAIMSVSGMR-VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + G R V LA+ AI + R+ G + D ++ +AD+A+ AA L Sbjct: 238 FNEFRPIIGARAVGLAQGAIDHAIQFVTNRYTFGARVSDNQGIRWMLADMAMQTEAARIL 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D + R E+ A MA K + +A V +A++ G +G + I R Sbjct: 298 VYSAAAMVDSGE-RGEKLAQQAAMA---KAFATDVAMKVTTDAVQLFGAAGISNDSPINR 353 Query: 433 HYRESPANSILLGS 446 + R++ I+ G+ Sbjct: 354 YMRDAKVTQIVEGT 367 >gi|254187301|ref|ZP_04893815.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|157934983|gb|EDO90653.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] Length = 1293 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 759 LTEPNAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 989 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021 >gi|298243655|ref|ZP_06967462.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297556709|gb|EFH90573.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 596 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 21/266 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLV 258 LTE G+D + ++ + DG Y L+G K W ++ +D F++ A++ R F+V Sbjct: 151 LTEPGVGSDAMGLGTRAELSEDGKYYILNGTKQWISNAGFADVFVVFARIGNERPSAFIV 210 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 E P G+ +NK+G + ++T +L + LLG+++ ++ + Sbjct: 211 ----EANWP-GVTTGPEENKMGIKGSSTRQLILQDVKVPTENLLGEIHKGYKIAFNILNI 265 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L +V G R +L A Y R G L + ++K+ +A +A + AA + FR Sbjct: 266 GRLKLGAGTVGGARNALKLAATYTNERKAFGKFLHEFGMIKKKLARMAAETYAAESEVFR 325 Query: 376 LANSFDEAKSRSEEAAYA--------RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + A+ + A I A + K ++ V+ E ++ GG G+++E Sbjct: 326 TAANISNAQHSGGDNTDAIFKAVEDYAIEASLAKVHGSEVLAMVVDEGVQIFGGYGFMKE 385 Query: 428 RSIARHYRESPANSILLGSG--NAMV 451 I + YR++ I G+ N MV Sbjct: 386 YPIEKAYRDARIQRIFEGTNEINRMV 411 >gi|255525452|ref|ZP_05392389.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] gi|255510817|gb|EET87120.1| acyl-CoA dehydrogenase domain protein [Clostridium carboxidivorans P7] Length = 379 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 GLTE GTD++ Q + DG Y L+G K F ++ P++D ++ A + G Sbjct: 123 FGLTEANAGTDVSG--GQATAVLDGDYYILNGEKKFTTNGPIADTLMVFALTDKTKGSKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + + + G +L++K+G R+ E + N + N+ E KI + Sbjct: 181 MSAFIVEKDFPGFSIGKLEDKMGIRAAQVSETLYKNC---RVPKENLVGKEGEGFKIAMK 237 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + V+ + +AE I Y + R G + + +AD+ + I A Sbjct: 238 ALDCGRIGVAAQGLGIAEGALEETIKYVKVRKQFGKEIYKFQGLAWMMADMDMKIEQARN 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++ A D S AA A++ A A V EA++ +GG GY+++ + Sbjct: 298 LVYKAAWEKDNGIPYSVSAARAKLAA-------TDAAMYVTTEAVQILGGYGYMKDYPLE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKITQIYEGT 365 >gi|156031211|ref|XP_001584930.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154699429|gb|EDN99167.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 443 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 19/279 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P T+ L+E G+D A+ ++ K G Y +SG+K W +S + FI+ A Sbjct: 172 PKLATNTVGSFCLSEPVSGSDAFALATKATKTDSG-YTISGNKMWITNSMEAGFFIVFAN 230 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 ++ G + + + G + + K+G ++++T L F + + N+ Sbjct: 231 IDPSKGYKGISAFIVEKGMKGFSIAKKEKKLGIKASSTCVLNFDDV---EIPKENLLGEE 287 Query: 309 VEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYA-RRRHVSGGILIDQPVMKRAIAD 361 + K I L+ + ++ LA A Y R G ++ D M+ IA Sbjct: 288 GQGYKYAIALLNEGRIGIAAQMTGLALGAFENATKYVWNDRKQFGQLVGDFQGMQHQIAQ 347 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +IAAA AL + A + + ++AA A++ A ++A V A++ +GG Sbjct: 348 SYTEIAAARALVYNAARKKEAGEDFVQDAAMAKLFA-------SQVAQRVSGLAVQWMGG 400 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G++ E + +R+S SI G+ N + + LL++ Sbjct: 401 MGFVREGIAEKMWRDSMIGSIYEGTSNIQLTTIAKLLKQ 439 >gi|84685154|ref|ZP_01013053.1| glutaryl Co-A dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84666886|gb|EAQ13357.1| glutaryl Co-A dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 397 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 35/248 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K +DG Y L+G K W +SP++D F++ A+ E G+V Sbjct: 139 FGLTEPDAGSDPAGMKTRAKK-TDGGYVLNGSKMWISNSPIADVFVVWAKSEAHDGKVRG 197 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL +++ K+ R++ T E+ + LL +++ +GP Sbjct: 198 FVLEKGMK-----GLSAPKIEGKLSLRASITGEIVMEDVEVGEDALLPNVSGMSGP---- 248 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQP-----VMKRAIADIALD 365 L+ A +S + AE + R H G D+P + ++ +AD+ + Sbjct: 249 --FGCLNRARYGISWGAMGAAEDCWF--RAHAYGMERKQFDRPLAATQLYQKKLADMQTE 304 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 IA + R+ D K +A M I K C A + +A + GG+G Sbjct: 305 IALGLQGALRVGRLMDAGK-------FAPEMISIVKRNNCGKALDIARQARDMHGGNGIS 357 Query: 426 EERSIARH 433 E + RH Sbjct: 358 SEYHVMRH 365 >gi|121598571|ref|YP_994760.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124383435|ref|YP_001027802.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia mallei NCTC 10229] gi|126448074|ref|YP_001082251.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10247] gi|254357322|ref|ZP_04973596.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei 2002721280] gi|121227381|gb|ABM49899.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei SAVP1] gi|124291455|gb|ABN00724.1| acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Burkholderia mallei NCTC 10229] gi|126240944|gb|ABO04037.1| long-chain specific acyl-CoA dehydrogenase [Burkholderia mallei NCTC 10247] gi|148026386|gb|EDK84471.1| acyl-CoA dehydrogenase, long-chain specific [Burkholderia mallei 2002721280] Length = 378 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW + VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|326797463|ref|YP_004315282.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] gi|326548227|gb|ADZ76612.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] Length = 597 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 46/289 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG--RVGCFL 257 LTE G+D + + + +G Y ++G K W + +D FI+ A+++ + F+ Sbjct: 151 LTEPNAGSDANSGRTTAKLNDEGTHYLINGQKMWITNGGFADIFIVFAKIDDDKNLSAFI 210 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V R G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 211 VERAF-----GGITMNPEEHKLGIKGSSTRQVFFNDCPVPKENLLSERENGFKIAVNILN 265 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + I L +A + S R +++AI+YA R + ++ +A++A Sbjct: 266 IGR---------IKLGAAAIGSS--RKVISQAINYANERVQFKLPIAKFGAIRYKLAEMA 314 Query: 364 LDIAAATALSFRLANSFDEAK----SRSEEAAYAR--------IMAPITKYWCCKMAPAV 411 A + ++R + D+A S E A A+ I I K W +M + Sbjct: 315 TRNFAVESAAYRAGQNIDDAYEALVSDGMEPAKAKLKSTEQFAIECAILKVWGSEMLDYI 374 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + E ++ GG GY + + R YR+S N I G+ L ++++L K Sbjct: 375 VDEGVQIYGGMGYSADAPMERSYRDSRINRIFEGTNEVNRLLIVDMLLK 423 >gi|294633167|ref|ZP_06711726.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292830948|gb|EFF89298.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 386 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 41/316 (12%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S+ AL TP V + + EY P M A ++EK G+D++A+ Sbjct: 77 SIQALSATPIVR--YGNREQQLEYLPR----MASGETAGSFAISEKEAGSDMSAVGLTAD 130 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVP------RLLEDG-- 265 ++S G Y L+G K W + ++D ++A+ G G FLVP R+LE+ Sbjct: 131 RVSGG-YLLTGRKAWIAHAGIADVHCVIARTGGGPGALGLTAFLVPARTPGVRVLEEVRL 189 Query: 266 -SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS 324 +P L + ++ + + S+ G V+T +E ++ + + Sbjct: 190 IAPRSLGHLAFEDCL---------VPESSVLGRPGQGFVVATDLLERFRMTV----GAAA 236 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V R ++ A+ AR R + GG L+D ++K A+AD+ + + A+ L R A D Sbjct: 237 VGFARRAVDSAVQQARERRMHGGRLMDLQLVKGALADMEVKLNASALLVARAAWELDHGN 296 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 YA+ + I K + A ++ A++ G +G + + R YR+ + I Sbjct: 297 P-----GYAK-HSSIAKVAATEAAQEIVDAAVQIHGAAGLVADSVPERLYRQVRSLRIYE 350 Query: 445 GSGNAMVLDVLNLLEK 460 G+ L + + L + Sbjct: 351 GASEVQKLIIADTLGR 366 >gi|260806450|ref|XP_002598097.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae] gi|229283368|gb|EEN54109.1| hypothetical protein BRAFLDRAFT_114913 [Branchiostoma floridae] Length = 385 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR------ 252 L +TE G+D+ I + +K D + L+G K F+++ M+D I++A + Sbjct: 127 LAMTEPGAGSDLQGIRTNAKKNGDD-WILNGSKVFITNGWMADVTIVVAITNPQAKSAAH 185 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN----- 303 + FLV +E G R KIG ++ T EL F + LLG N Sbjct: 186 GISLFLVEEGME-----GFKKGRKLEKIGMKAQDTAELFFDDVRLPPSALLGQENRGFVY 240 Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + P E LI D AI S M E +Y + R G + ++ +A+I Sbjct: 241 LMQELPQER---LIIADMAIASSEFM---FEETRNYVKERKAFGKTVSRLQTIQHKLAEI 294 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 DI A + ++ + S A+ A K+W + V + ++ GG Sbjct: 295 KTDIVVGRAFLDQCLELHNQGRLDSNTASMA-------KFWASDLQNRVATQCLQMHGGW 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IA+ + +S I GS M Sbjct: 348 GYMWEYPIAKAFVDSRVQPIYGGSNEIM 375 >gi|326919882|ref|XP_003206206.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Meleagris gallopavo] Length = 465 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D I+ A+ + V Sbjct: 204 LAMSEPNAGSDVVSMKLKADKKGD-YYVLNGNKFWITNGPDADVLIVYAKTDLNA----V 258 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 P ++E G P Q+L +K+G R + T EL F + +LG L+ Sbjct: 259 PASQGITAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAENILGKLSKGV-- 315 Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ LD + +SG M+ L AI Y R G + +M+ +AD+ Sbjct: 316 ---YVLMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMY 372 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A + +A + D+ +++ A + + + A V + ++C+GG+G Sbjct: 373 TRLMACRQYVYNVAKACDQGHFNAKDCAGVILFSA-------ECATQVALDGIQCLGGNG 425 Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451 YI + + R R++ I G+G + V Sbjct: 426 YINDYPMGRFLRDAKLYEI--GAGTSEV 451 >gi|320352863|ref|YP_004194202.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032] gi|320121365|gb|ADW16911.1| butyryl-CoA dehydrogenase [Desulfobulbus propionicus DSM 2032] Length = 381 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLA 247 P+ K G GLTE G+D + + DG + L+G K F+++ ++ +++LA Sbjct: 114 PLAKGEKIGGFGLTEPSAGSDAGGTKTTATR--DGNDWILNGSKIFITNAGEAETYVVLA 171 Query: 248 QVEGR------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + + + F+V E G+P G + + + K+G RS+ T+EL F N + GD Sbjct: 172 RSDKNAEKHRGISAFIV----EKGTP-GFSFGKKEKKMGIRSSPTMELVFENC--RIPGD 224 Query: 302 LNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVM 355 N+ + K+ + LD + ++ + +A+ A+ Y + R + + Sbjct: 225 -NLLGQEGQGFKVAMKTLDGGRIGIAAQALGIAQGALDAALAYTKEREQFNKPIASFQGV 283 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A + AA L + A S S E+A A++ A T A V +A Sbjct: 284 SFQLADMATQVEAARLLIYNAAYRASNGLSYSLESAMAKLFASET-------AMRVTTQA 336 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY E + R R++ I G+ Sbjct: 337 VQLHGGYGYTREFPVERMMRDAKITEIYEGT 367 >gi|296167104|ref|ZP_06849514.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897546|gb|EFG77142.1| acyl-CoA dehydrogenase (NADP(+)) [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 460 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 56/329 (17%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 S + +P +WAP+ F D ++ ++AI +E GG+D+ + ++ + Sbjct: 96 SAIGQAASPEQMLEWAPECFGTPGD------LKLAALAI----SEPEGGSDVRNLRTRAR 145 Query: 220 KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQ 273 + D + + GHK W + +++ ++ A V+ +G F+VP G+P GL Sbjct: 146 RDGDD-WIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVP----GGTP-GLKLV 199 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDL---------------------NVSTGPV 309 R +K+G R++ T EL LLG + + G Sbjct: 200 RKLDKLGCRASHTAELLLEGVRVPGANLLGGQEKLEHKLAKAREVVAGGKRSGSATLGTF 259 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E + ++ A ++ R +L A YA R GG +ID + +A++A I AA Sbjct: 260 EQTRPMV----AAQAIGIARAALEYATAYATEREAFGGPIIDNQGIAFPLAELATQIDAA 315 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R S+ A + + R ++K ++A A++ +GG GYI + Sbjct: 316 RLLTWR--ASWMAANN----VPFERGEGSMSKMAASEVAVKATERAIQTMGGWGYITDHP 369 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 + + YR++ +I G+ + + N L Sbjct: 370 VEKWYRDAKLYTIFEGTSEIQRMVIANAL 398 >gi|145237726|ref|XP_001391510.1| isovaleryl-CoA dehydrogenase 2 [Aspergillus niger CBS 513.88] gi|134075984|emb|CAK48178.1| unnamed protein product [Aspergillus niger] Length = 431 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 17/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG + L+G K W + P +D ++ A+ E + Sbjct: 165 LAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITNGPDADYIVVYAKTEPEKASKGI 223 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F +LG++N +K+L Sbjct: 224 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELVFEDVFVPKENVLGEVN------RGVKVL 277 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ +AA+ Sbjct: 278 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHVRKQFGMPIAHNQLIQGKLADMYTKLAAS 337 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A ++ A D + + A + + A +A++ +GG+GYI E Sbjct: 338 RAYTYATARQIDNSAAEGSGALIRTQDCAGAILYAAERATECALDAIQLMGGNGYINEIP 397 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 398 AGRLLRDAKLYEIGAGT 414 >gi|254250103|ref|ZP_04943423.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124876604|gb|EAY66594.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 411 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 159 LTEPHAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPEAGKRGISA 217 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 218 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENC---AIPEENLLGNRGEGLKIA 269 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A+ I AA Sbjct: 270 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMAVQINAA 329 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 330 RLLVHHAAKLRTAGLPCLSEASQAKLFAS-------EMAERVCSDAIQIHGGYGYLVDYE 382 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 383 VERHYRDARITQIYEGT 399 >gi|21219931|ref|NP_625710.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|6468707|emb|CAB61663.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] Length = 391 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D A++ ++ + S G + ++G K W ++D + ++A+ +G G F Sbjct: 133 LSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHGGIADFYTVMARTGEDGPRGITAF 192 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP E GL + K+G + + T +L G + D + I L Sbjct: 193 LVPADAE-----GLSAAVPEKKMGLKGSPTAQLHLD---GVRVPDARRLGDEGQGFAIAL 244 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A Sbjct: 245 SALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQGLRFMLADMATQIEAGR 304 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D +++AA A K C A V +A++ +GG GY + Sbjct: 305 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTHDAVQILGGYGYTADFPA 357 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 358 ERYMREAKVLQIVEGT 373 >gi|291522107|emb|CBK80400.1| Acyl-CoA dehydrogenases [Coprococcus catus GD/7] Length = 387 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--------- 249 GLTE GTD AA+ K + L+G K F+++ +D F++ A V Sbjct: 123 FGLTEPGAGTD-AAMQKTVAKDEGDHWVLNGSKVFITNAQYADIFVVFAMVYRDDYKERP 181 Query: 250 --EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + F++ + E G Q + K+G R ++T L F N ++ N+ Sbjct: 182 YTNKDISAFIIEKGFE-----GFSVQGHEMKMGIRGSSTCSLYFDNC---IVPKENLLGE 233 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + K+ + LD + ++ + +A E + Y + R G + + +AD Sbjct: 234 QGKGFKVAMTTLDGGRIGIAAQAIGIAQGAINETVAYTKERVQFGKPIWKFQNTQFQLAD 293 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + + AA L +R A + + + S AA A+++A T A V ++ +GG Sbjct: 294 MQAKVDAARLLVYRAAQAKQDGEPHSHLAAMAKLVASET-------ASDVARRCVQLVGG 346 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GY E RH R++ I G+ Sbjct: 347 NGYSREYPFERHMRDAKITEIYEGT 371 >gi|228921915|ref|ZP_04085227.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837747|gb|EEM83076.1| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 397 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 34/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 L LTE G+D+ I + + D + KW +D F++ ++ G + C L Sbjct: 124 LALTEPGAGSDLNMIKTNFDQHGDKLILNGVKKWITFGAAADVFLVFGKLNGEQPIAC-L 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVS 305 VP+ G+ +++ +G ++ E+EF+N F F ++ Sbjct: 183 VPK-----DSVGVNVTHIRDMLGFKAAYLAEIEFNNVEIPLENIIGRPGFAFTY----LA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A ++ +R L ++ R G LID ++ + D+ +D Sbjct: 234 PYALEFGRISI----AFAALGVLRTCLEICGNHVLHRSAFGNSLIDHGMISHMVTDMGVD 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ LS + +E ++ + E +IM I KY+ + A++ +G G Sbjct: 290 LEASILLSLEACKAKNEHRADATE----KIM--IAKYFASRSGTRHSTNAVQIMGALGCN 343 Query: 426 EERSIARHYRESPANSILLGS 446 + SI+R +R+S I+ GS Sbjct: 344 DNYSISRCFRDSKTMEIVEGS 364 >gi|222111580|ref|YP_002553844.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax ebreus TPSY] gi|221731024|gb|ACM33844.1| acyl-CoA dehydrogenase domain protein [Acidovorax ebreus TPSY] Length = 398 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 25/266 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 172 Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A +VE + + D GL + K+G R++ T E+ + F Sbjct: 173 SPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 233 VPEENAFPEVRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 287 PLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365 >gi|241554285|ref|YP_002979498.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863591|gb|ACS61253.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 381 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 39/291 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +P + + PK+ S E+ + L ++E G+D+ ++ + +K D Y Sbjct: 104 SPEQKRRYLPKLISGEHVGS-------------LAMSEVGAGSDVVSMRLRAEKKGD-RY 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++P +D ++ A+ + G + L+ E G P G + +K+G R + Sbjct: 150 VLNGTKFWITNAPHADVLVVYAKTDPAAGPKGISALIIEKGLP-GFGVSKKLSKLGMRGS 208 Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEA 335 T EL F + L+G E +KIL+ LD ++G M+ L Sbjct: 209 DTAELVFEDCAVPAEALMGREG------EGVKILMSGLDYERAVLAGGPLGIMQACLDVV 262 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y R R G + D +M+ IAD+ + + +A A + +A + D ++ +AA A + Sbjct: 263 LPYVRDRKQFGKAIGDFQLMQGKIADMYVALNSARAYVYSVARACDAGRATRTDAAAAIL 322 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + A V EA++ +GG+GY +E + R R++ I G+ Sbjct: 323 FA-------SENAVKVSLEAIQALGGAGYTKEWPVERFLRDAKLYDIGAGT 366 >gi|83721003|ref|YP_440620.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|167617415|ref|ZP_02386046.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4] gi|83654828|gb|ABC38891.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] Length = 378 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 124 IAMTEPGAGSDLQGVRTSAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 183 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 241 PWERLQIAISAIASAEAALAWTLDYTRDRRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 300 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW ++ VI ++ GG GY+ E Sbjct: 301 DKCIELQLAGKLDAA------------TASMAKYWTTELQFKVIDRCVQLHGGYGYMWEY 348 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 349 PIARAWADSRVQQIYGGTNEIM 370 >gi|26990266|ref|NP_745691.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24985215|gb|AAN69155.1|AE016549_4 acyl-CoA dehydrogenase family protein [Pseudomonas putida KT2440] Length = 589 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 34/301 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFI 244 P+ + A + LTE GTD+ I ++ + +DG +SG K F++ D + Sbjct: 154 PLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADGSVRISGSKIFITGGEQDLTENIVHL 213 Query: 245 MLAQVEGR------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN 293 +LA++ + FLVP+ L + G+ N + +++K+G +++AT + F Sbjct: 214 VLAKMPDAPAGAKGISLFLVPKFLVEADGRLGARNAVHCGSIEHKMGIKASATCVMNFDG 273 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ- 352 G+L+G+ N + M L I + S A YA R S Q Sbjct: 274 AIGYLVGEPNKGLTAMFTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA 333 Query: 353 ------PVMK-----------RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 P++ R + + A +A ++A R + Sbjct: 334 HDKAADPIIHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVAL 393 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + GG GYI E + R+ I G+ LD+L Sbjct: 394 LTPVAKAFFTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLL 453 Query: 456 N 456 Sbjct: 454 G 454 >gi|15842262|ref|NP_337299.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|13882554|gb|AAK47113.1| acyl-CoA dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|323718717|gb|EGB27879.1| acyl-CoA dehydrogenase fadE20 [Mycobacterium tuberculosis CDC1551A] Length = 386 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 34/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE +D+ IT++ K D Y L+G K F+++ + SD I++AQ + G Sbjct: 130 IAMTEPGTASDLQGITTRAVKHGDH-YVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGF 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNV 304 L+ + G R +KIG + T EL F++ F +L+ +L Sbjct: 189 SLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNL-- 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 P E + I AIM+ +GM L + + YA+ R G + + +A++A Sbjct: 247 ---PQERISI------AIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELAT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + K +E+AA A K++ + + ++ GG GY Sbjct: 298 EATVVRIMVDEFIKLHLAGKLTAEQAAMA-------KWYATEKQVYLNDRCLQLHGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 + E +AR Y +S +I G+ M Sbjct: 351 MREYPVARAYLDSRVQTIYGGTTEIM 376 >gi|330503596|ref|YP_004380465.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328917882|gb|AEB58713.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 375 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + LTE + G+D + + ++ ++ + Y L G K F++S +++ V Sbjct: 111 PLASGEMLGAFALTEPQAGSDASDLRTRARREGEH-YVLDGAKQFITSGSHAGMVIVFAV 169 Query: 250 E----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 G+ G F+VP G R+++K+G ++ T +++F LG Sbjct: 170 TDPQAGKKGISAFIVPT-----DTPGFSVVRVEDKLGQHASDTCQIQFDAVRIPDSLRLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ +E +I I A +V R + A YA R G +I+ + Sbjct: 225 EEGEGYRIALANLEGGRIGI----AAQAVGMARAAFEAARDYAHERVTFGKPIIEHQAVA 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A IA A + A+ + + EA+ A++ A +MA V + A+ Sbjct: 281 FRLADMATQIAVARQMVHHAASLREAGQPCLTEASMAKLFA-------SEMAEKVCSAAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + +GG GY+++ + R YR+ I G+ + Sbjct: 334 QTLGGYGYLKDFPVERIYRDVRVCQIYEGTSD 365 >gi|302507358|ref|XP_003015640.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371] gi|291179208|gb|EFE34995.1| hypothetical protein ARB_05951 [Arthroderma benhamiae CBS 112371] Length = 540 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 37/275 (13%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 264 ICLAITEPDAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRTGGP-GM 322 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 323 GGVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 381 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 382 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 435 Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416 A SF L N + ++ E+AA R+ I T +C + A + Sbjct: 436 EA----SFNWLENLVFQCQNMDEDAAALRLGGAIAGLKAQSTTTFEFCAREASQIFGGLS 491 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR+ A +I GS M+ Sbjct: 492 YSRGGQG----GKIERLYRDVRAYAIPGGSEEIML 522 >gi|111222831|ref|YP_713625.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111150363|emb|CAJ62060.1| Putative Acyl-CoA dehydrogenase [Frankia alni ACN14a] Length = 389 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 32/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRV 253 + LTE GG+D+ A+ + + DG + + G K ++S+ I L A Sbjct: 125 MALTEPGGGSDLQALRTVARPDGDG-WVVDGAKTWISNARRSGLIALLCKTDPAAKPAHR 183 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD-LNVS 305 G ++ L+E G G R K+G + + EL F + G + G N Sbjct: 184 GISIL--LVEHGP--GFTVSRDLPKLGYKGIESCELHFDGYRAPGDSVLGGVTGKGFNQM 239 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I + A ++ R + +A+ YA+ R G + + + +AD+ Sbjct: 240 MAGLEVGRIQV----ASRALGVARAAFDDALRYAQERETFGKPIWEHQSIGNYLADMGTK 295 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L A FD EA A++ A +MA V +A+ GG GY Sbjct: 296 ILAARQLILHAAEVFDSGARADMEAGMAKLFA-------SEMAATVTLDAIRIHGGYGYS 348 Query: 426 EERSIARHYRESPANSILLGSGN 448 E + R++R++P +++G G Sbjct: 349 TEFDVERYFRDAPL--MIVGEGT 369 >gi|301346789|ref|ZP_07227530.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB056] gi|301597822|ref|ZP_07242830.1| putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii AB059] Length = 372 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|297528853|ref|YP_003670128.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|297252105|gb|ADI25551.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] Length = 594 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 47/313 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W +S +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311 R G+ + K+G +S++T V + N G + G V Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 IL + +V G + +L + YA +R + + + A +A + AA Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318 Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + +R FDE K ++ A I + K++ ++ ++ E ++ Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465 GG G+++E I R YR+S N I G+ L V L L +K L Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKALKGELPLFQKAQQLQ 438 Query: 466 EQLFSTLEQDLGS 478 E+L ++ GS Sbjct: 439 EELMMMAAEEPGS 451 >gi|254823450|ref|ZP_05228451.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 382 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 16/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + ++ D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAERDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPAANLVGAENSGFAQIAQAFVA 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ +A++A I A S Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRH 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + ++ + +A+ A W V +A++ GG GY+ E + R Y Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMTESEVERQY 354 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R+ + +G G +L L+ Sbjct: 355 RD--MRILGIGGGTTEILTALS 374 >gi|225852588|ref|YP_002732821.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457] gi|256263921|ref|ZP_05466453.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|225640953|gb|ACO00867.1| glutaryl-CoA dehydrogenase [Brucella melitensis ATCC 23457] gi|263094065|gb|EEZ17987.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326409107|gb|ADZ66172.1| glutaryl-CoA dehydrogenase [Brucella melitensis M28] gi|326538813|gb|ADZ87028.1| glutaryl-CoA dehydrogenase [Brucella melitensis M5-90] Length = 394 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L ++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPSVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCDKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|209154530|gb|ACI33497.1| Isovaleryl-CoA dehydrogenase, mitochondrial precursor [Salmo salar] Length = 414 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E G+D+ ++ + +K D Y L+G K W + P +D I+ A+ + + Sbjct: 155 LAMSEPNAGSDVVSMKLKAKKEGDH-YILNGVKFWITNGPDADVLIVYAKTDPEAHQKGI 213 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V E G P Q+L +K+G R + T EL F + +LG LN + Sbjct: 214 TAFIV----EKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPVENVLGPLNKGVYVMM 268 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L L A + M+ + ++ Y R G + +M+ +AD+ + A Sbjct: 269 SGLDLERLVLAAGPIGIMQSVMDFSVPYLHVREAFGQKIGHFQLMQAKMADMYTRLGACR 328 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +A + D+ S + A + +C + A V + ++C+GG+GYI + + Sbjct: 329 QYLYNVARACDKGHFSSMDCAGVIL-------YCAENATQVALDGIQCLGGNGYINDYPM 381 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 382 GRFLRDAKLYEIGAGT 397 >gi|319951408|ref|ZP_08025227.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4] gi|319434927|gb|EFV90228.1| butyryl-CoA dehydrogenase [Dietzia cinnamea P4] Length = 612 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 63/298 (21%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF------IMLAQVEGR--- 252 LTE G+D+ A ++ K DG + + G K F++S SD ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIKQDDGSWHIEGVKRFITSADSDDMFENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLL 299 + F VP+ D G NG+ +++K+G +++ T E+ F G+++ Sbjct: 224 TKGLSLFFVPKFHFDFENDELGERNGVFVTGVEHKMGIKASTTCEVTFGGHGVPAKGWMV 283 Query: 300 GDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-- 351 G ++ G +E ++++ ++S + A+ +A+ R V GG + + Sbjct: 284 GGDELNQGIRQMFDVIEHARMMV----GTKAISTLSTGYLNALEFAKER-VQGGDMTEMA 338 Query: 352 -----------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------ 394 P ++RA+ A A R + A E A A Sbjct: 339 DKTAPRVTITHHPDVRRALIR-----QKAFAEGLRAVYMYTAAHQDPETAVRASGADAEL 393 Query: 395 ------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ PI K + A ++ E+++ GGSG++++ I ++ R++ +S+ G+ Sbjct: 394 AHRVNDLLLPIVKGVGSERAYELLTESLQTFGGSGFLQDYPIEQYIRDAKIDSLYEGT 451 >gi|126735560|ref|ZP_01751305.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] gi|126714747|gb|EBA11613.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] Length = 407 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A + + +K DG Y ++G K W ++P++D F++ A+ +G++ Sbjct: 149 FGLTEPDAGSDPAGMKTTAKKTEDG-YIINGSKMWISNAPIADVFVIWAKSDAHDGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ N + LL + GP Sbjct: 208 FVLDKGMQ-----GLSAPKVGGKLSLRASVTGEIVMDNVAVSEDALLPGVQGLKGP---- 258 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367 L+ A ++ + AEA +A R++ ++P + ++ +AD+ +IA Sbjct: 259 --FGCLNRARYGIAWGVMGAAEACWHAARQYGLDRKQFNKPLAQTQLFQKKLADMQTEIA 316 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 T + +L ++ K+ E M + K C A + + + GG+G E+ Sbjct: 317 LGTQSALQLGRLMEQGKAAPE-------MISLMKRNNCGKALDIARASRDMHGGNGISED 369 Query: 428 RSIARH 433 I RH Sbjct: 370 FQIMRH 375 >gi|170732670|ref|YP_001764617.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169815912|gb|ACA90495.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 609 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 70/361 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI----YCLSGHKWFLSSPMSD-----AFIMLAQV--- 249 L+E + G+ ++ I ++ D Y L+G+K ++S + ++LA++ Sbjct: 163 LSEPQAGSSLSDIATRADFEGDSPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222 Query: 250 EGR-------VGCFLVPRLLE--DGSPNG----LCYQRLKNKIGNRSNATVELEF----- 291 GR + F+VP+ L DG NG + L +K+G R L F Sbjct: 223 HGRLLPGTRGISLFIVPKFLTGTDGDANGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340 + G+L+G N + M ++ A + V V+L A+ YAR Sbjct: 283 YRPEGRAGAIGYLVGRPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337 Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R + ++D P ++R + + AL+ A DEA++ Sbjct: 338 NRPQGRPLGPAGKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALTLYCARLVDEARAHD 397 Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A A I+ PI K W + A A++ GG GY + ++ R YR++ N Sbjct: 398 DAAVRAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457 Query: 442 ILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLA 501 I G+ LD+L K T L+ +G++ ++ + C++ LA Sbjct: 458 IHEGTHGIQALDLLG--RKVTQDDGASLRALDARIGATVERARAL---DAGACEQADALA 512 Query: 502 R 502 R Sbjct: 513 R 513 >gi|317487978|ref|ZP_07946561.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912927|gb|EFV34453.1| acyl-CoA dehydrogenase domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 379 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 28/261 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQV----EGR 252 I LTE G+DI+AI++ DG Y ++G K F+++ + D F + A+V + + Sbjct: 119 ICFALTEPNAGSDISAISTTALPDGDG-YTINGGKIFITNGAVGDWFTVFARVVEDGQSK 177 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 CF+V R GL R ++K+G R + T +L F N +G V G V D Sbjct: 178 PSCFIVHR-----DTPGLVIGRKEDKMGLRGSVTSQLYFENMH---VGPEAV-VGEVGDG 228 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALD 365 + + L+ ++V+ + + A A + R G + D ++ +AD+ + Sbjct: 229 FAIAHHTLNRGRLAVAALATGVTAASLAAAAAYAKERIQFGKHIADLQAIRFMLADMEIT 288 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ L + A++F + A + K +C + A A++ GG G Sbjct: 289 LEASRLLLDQAASAF------GGDIQTMMKTASVAKVYCSEAAVKAAETAVQIFGGYGLC 342 Query: 426 EERSIARHYRESPANSILLGS 446 ++ + R+YR++ + +I+ G+ Sbjct: 343 KDYPVERYYRDAKSFTIVEGT 363 >gi|295835338|ref|ZP_06822271.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|197696410|gb|EDY43343.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 387 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA++++ + D + L+G K F+S + ++ G G + Sbjct: 130 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 188 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L D GL + ++K+G + T V + G ++ + ++ Sbjct: 189 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRMLGAEGQGFRIAMNGLNGGRL 248 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ G R +L ++ + R G LI+ ++ +AD+A ++AAA AL Sbjct: 249 GI----AACSLGGARSALDRSLQHLAEREAFGHPLIESEALRFRLADMATELAAARALLH 304 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A++ D +++ + + + K + + A++ GG GY+ E I + Sbjct: 305 QAADALDRKDAQAPQ------LIAMAKRFATDTGFRIADRALQLHGGYGYLHEYGIEKIV 358 Query: 435 RESPANSILLGSGNAM 450 R+ + IL GS M Sbjct: 359 RDLRVHQILEGSNEIM 374 >gi|83594394|ref|YP_428146.1| isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] gi|83577308|gb|ABC23859.1| Isovaleryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] Length = 563 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 43/307 (14%) Query: 144 AQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLT 203 A + G L + S +A +++L T + W P++ S E PT T Sbjct: 253 AYIGVGSLGTRSEIAAELISLGGTEEQKRQWLPRLASGEILPTAV-------------FT 299 Query: 204 EKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLL- 262 E G+D+A++ S+ ++ D W + SD +L + + G + +L Sbjct: 300 EPNTGSDLASLRSRAERDGDTYRVTGAKTWITHAARSDLMTLLVRTNPQEGGYKGLSMLL 359 Query: 263 --------EDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM- 312 ED P G+ +K +G R EL F GF + N+ G E Sbjct: 360 AEKPRGSDEDPFPAKGMAGGEIK-VLGYRGMKEYELSFD---GFEVPAANL-LGSEEGQG 414 Query: 313 --KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +++ +SA + + V +A+ + YA+ R G L P + +A +A++ Sbjct: 415 FKQLMATFESARIQTAARAVGVAQNAMEVGLRYAQDRVQFGKPLYAFPRVHGKLAWMAVE 474 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A L++R D + EA A+++A ++A + A++ GG+GY Sbjct: 475 TMVARQLTYRAGREKDSGRRCDIEAGMAKLLA-------ARVAWSNADNALQVHGGNGYA 527 Query: 426 EERSIAR 432 EE I+R Sbjct: 528 EEYPISR 534 >gi|297566220|ref|YP_003685192.1| acyl-CoA dehydrogenase domain-containing protein [Meiothermus silvanus DSM 9946] gi|296850669|gb|ADH63684.1| acyl-CoA dehydrogenase domain protein [Meiothermus silvanus DSM 9946] Length = 578 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 17/257 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE + G+D ++ + DG Y ++G K W ++ + F + A+ + + FLV Sbjct: 148 LTEPQSGSDAMGAKTRAELSEDGKYYIINGTKMWISNAGFAHLFTVFAKTKEGLTAFLVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 R GL + K+G +S++T ++ F + +LG+L ++ + Sbjct: 208 R-----DTPGLRLGGEEKKMGIKSSSTRQVFFEDVKVPVENVLGELGKGHKIAFNVLNVG 262 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 ++ G + +LA + YA+ R G + + ++++ +A++A I A + +R Sbjct: 263 RYKLGAGAIGGAKEALALSAKYAKERVAFGQPIANFGLIQQKLAEMASRIFAGESAVYRT 322 Query: 377 ANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 DEA EA A I A I K ++ + E ++ GG GY E + Sbjct: 323 MGLIDEAIAGKTGTEAVLAGIEEYAVEASIIKVLGSEILDYAVDEGVQIHGGYGYSGEYA 382 Query: 430 IARHYRESPANSILLGS 446 I R YR+S N I G+ Sbjct: 383 IERAYRDSRINRIFEGT 399 >gi|183983130|ref|YP_001851421.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] gi|183176456|gb|ACC41566.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] Length = 381 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 42/294 (14%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YC 227 + + W PK+ S E IG + +TE G+D+ ++ ++ I DG Y Sbjct: 109 LRRQWLPKMASGEM--------------IGAIAMTEPGTGSDLQSVKTKA--ILDGDEYV 152 Query: 228 LSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 ++G K F+++ +D I++A+ + G + ++ + G ++ +KIG R T Sbjct: 153 ITGAKTFITNGQQADLIIVVAKTDPSQGAAGISLIVAEADRPGFRRGKVLDKIGQRGQDT 212 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARR 341 EL F + LLG+ G ++ M L L A+ +V+ M +++ + + Y R Sbjct: 213 SELFFDDVRVPRSHLLGETE-GQGFIQLMTQLPQERLIVAVGAVAAMELAVEQTLKYTRE 271 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSFDEAKSRSEEAAYARIM 396 R G + K +A+ A + A + LA D Sbjct: 272 REAFGRPVFGFQNTKFILAEAATETRIARVFLDYCIDLHLAGQLDVQT------------ 319 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W + A V+ + ++ GG GY+ E I+R + + I G+ M Sbjct: 320 VAMAKWWTTERAMKVLDDCLQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVM 373 >gi|167827126|ref|ZP_02458597.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9] Length = 1326 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 792 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 849 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 850 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 908 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 909 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 967 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 968 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 1021 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 1022 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1054 >gi|76810463|ref|YP_331701.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|76579916|gb|ABA49391.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] Length = 430 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 26/262 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + + D Y L+G K F+++ +D I++A+ G Sbjct: 176 IAMTEPGAGSDLQGVRTTAVRDGDH-YVLNGSKIFITNGWHADVVIVVARTTPEGGSKGT 234 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + D G + K+G ++ T EL F G LLG+ N G V M+ L Sbjct: 235 SLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEEN--RGFVYLMQEL 292 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-- 371 + L AI +++ +LA + Y R R G +ID + A+A++ +I Sbjct: 293 PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV 352 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + +LA D A A + KYW + VI ++ GG GY+ E Sbjct: 353 DKCIELQLAGKLDAA------------TASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEY 400 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR + +S I G+ M Sbjct: 401 PIARAWADSRVQQIYGGTNEIM 422 >gi|302754098|ref|XP_002960473.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii] gi|300171412|gb|EFJ38012.1| hypothetical protein SELMODRAFT_164182 [Selaginella moellendorffii] Length = 429 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 87/392 (22%), Positives = 159/392 (40%), Gaps = 69/392 (17%) Query: 89 PGGERWDKVEFHPAWHALLRRSI---HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 P G +WD ++ P +LR++ G+ C+ E V + +++ A ++ Sbjct: 65 PNGAQWDCDKYFPV--EVLRKAAGLGFGGMFCA------EDVGGSRLNRVDGAVIF--EA 114 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD-----WAPKIFSREYDPTNKAPMQKTSVAIGL 200 L G + + + + + R D W PK+ E+ + Sbjct: 115 LAYGDVSTTAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQMEFFSS-------------Y 161 Query: 201 GLTEKRGGTDIAAI---------TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE 250 LTE G+D A++ T+ Q Y L+G K F+S +SD ++++A+ Sbjct: 162 CLTEPSSGSDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART- 220 Query: 251 GRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL 298 G +G CF LLE G P GL + R ++K+G RS T V + +N G Sbjct: 221 GALGPKGISCF----LLEKGMP-GLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGRE 275 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 ++ ++ +I I A S G + L A YA R G + + + Sbjct: 276 GQGFAIAMAGLDGGRINI----ASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFK 331 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ + A+ + A + D + A A + K + + +A++ Sbjct: 332 LADMQTALHASRLMVSNAAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQL 385 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+++ + R+ R+ ++IL G+ M Sbjct: 386 HGGYGYLKDYPVERYLRDLRVHTILEGTNEIM 417 >gi|296271156|ref|YP_003653788.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296093943|gb|ADG89895.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 381 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 35/280 (12%) Query: 184 DPTNKAPMQKTS--VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS 240 +P +A + + + A+ + ++E G+D AAIT + ++ SDG + ++G K W ++ + Sbjct: 106 EPLKRAVLGRIAEGAAMAISISEPEAGSDAAAITCRAERTSDG-WVINGQKTWCTNAHAA 164 Query: 241 DAFIMLAQV-EGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 D +++A+ +G + F VPR GL + + G N +L F++ Sbjct: 165 DGILLVARTSQGEKKHHGLTMFHVPR-----ETPGLTIKPIDTMNGPEVN---DLYFTDC 216 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGIL 349 L D V ++++ LD+ + ++ + +AE + + R R G + Sbjct: 217 --VLPEDAVVGEVDAGWRQLMVGLDTERLILAANTLGIAERAFDDCLEFVRERRQFGRPV 274 Query: 350 IDQPVMKRAIADIALDIAAATALSF---RLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 +K +AD+A +I A L + R A+ D + + E++ A++ A + Sbjct: 275 GSFQAIKHRLADLATEIEYARLLVYSVARQADDPDRTRPLTRESSMAKLKA-------TE 327 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A A+ E M+ +GG GY E ++ +H R + +I G+ Sbjct: 328 VAKAMALEGMQMMGGYGYSTEFTMVQHVRMALGATIYGGT 367 >gi|149922588|ref|ZP_01911017.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] gi|149816544|gb|EDM76040.1| Acyl-CoA dehydrogenase [Plesiocystis pacifica SIR-1] Length = 600 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 34/269 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQ----VEG---- 251 LTE G+D A+I ++ + DG + L G K W + +D F + AQ V+G Sbjct: 170 LTEPSSGSDAASIRTRAKLSEDGEHWILDGSKMWITNGGFADLFTVFAQTQIEVDGEMKD 229 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV 304 R+ F+V R G+ ++K+G + ++T + F N G + G V Sbjct: 230 RITAFIVERDF-----GGVESGPEEHKLGIKGSSTTTIHFDGCKVPKQNVLGEVGGGFKV 284 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + + + + A V G + + A YA R G L D ++K+ A++AL Sbjct: 285 AMTILNNGRFGL----AAGCVGGAKRLIGLAATYANERKQFGKSLSDFGLIKKKFAEMAL 340 Query: 365 DIAAATALSFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 AA ++++ D+ + + EAA +++ A W + E ++ +GG G Sbjct: 341 MTYAAESMTYMTCGLMDKGGRDYAIEAAMSKVAAS-EAMWI------IANECLQVMGGLG 393 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452 Y +E R R+ N I G+ + L Sbjct: 394 YSKEYVFERFVRDGRINIIFEGTNEILRL 422 >gi|254504546|ref|ZP_05116697.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222440617|gb|EEE47296.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 389 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P ++ AI LTE + G+D+A T D Y L+G K W + ++D + + A Sbjct: 112 PKTRSGEAISAFALTEPQSGSDVANSTMTATDDGDS-YVLNGEKTWISNGGIADVYTLFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 + G + + G + I AT L F++ L+G N Sbjct: 171 RTGEAPGAKGLSAFVVTPDRQGFEITERLDTIAPHPLAT--LRFTDCRIKKSDLIG--NP 226 Query: 305 STGPVEDMKILIYLDSAIMSVS-GM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G M +L S + + + G R +L EA+ R + G L D +++ IAD+ Sbjct: 227 GDGFKIAMSVLDIFRSTVAAAALGFARRALDEALERVSTRQIQGAPLADLQMVQGHIADM 286 Query: 363 ALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 ALD+ AA L +R A + D R + EAA A++ A + A VI +A++ GG Sbjct: 287 ALDVDAAALLIYRAAWAKDSGAPRVTREAAMAKLFA-------TEQAQQVIDKAVQLHGG 339 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G ++ + YRE A I G+ Sbjct: 340 DGVRSGETVEKLYREIRALRIYEGA 364 >gi|261420445|ref|YP_003254127.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|319768113|ref|YP_004133614.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] gi|261376902|gb|ACX79645.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. Y412MC61] gi|317112979|gb|ADU95471.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y412MC52] Length = 594 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 47/313 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W +S +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311 R G+ + K+G +S++T V + N G + G V Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 IL + +V G + +L + YA +R + + + A +A + AA Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318 Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + +R FDE K ++ A I + K++ ++ ++ E ++ Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLF 465 GG G+++E I R YR+S N I G+ L V L L +K L Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGTNEINRLLVPGMYLKKAVKGELPLFQKAQQLQ 438 Query: 466 EQLFSTLEQDLGS 478 E+L ++ GS Sbjct: 439 EELMMMAAEEPGS 451 >gi|163844406|ref|YP_001622061.1| hypothetical protein BSUIS_B0224 [Brucella suis ATCC 23445] gi|163675129|gb|ABY39239.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 380 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 28/246 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ----VEGRVG-- 254 LTE G+D A++ + + D Y L+G K F++ +P++D F ++A+ V+G G Sbjct: 124 LTEPDAGSDAASLKTTAVRDGD-FYILNGTKRFITNAPIADIFTVMARTAADVKGADGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F+V R SP GL + K+G + T ++ F N L+G + G Sbjct: 183 AFIVER----NSP-GLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVE-GKGFKTA 236 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 MK+L D + ++ + AE + R G + D +++ +AD +I AA Sbjct: 237 MKVL---DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAK 293 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + A D ++ S EA+ A K + +M V ++ GG+GY+ E +I Sbjct: 294 CMVLDAARKRDSGQNVSTEASCA-------KMFATEMCGRVADRCVQIHGGAGYVSEYAI 346 Query: 431 ARHYRE 436 R YR+ Sbjct: 347 ERFYRD 352 >gi|170740707|ref|YP_001769362.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium sp. 4-46] gi|168194981|gb|ACA16928.1| acyl-CoA dehydrogenase domain protein [Methylobacterium sp. 4-46] Length = 380 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 20/261 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + ++ D Y L G K F+S + D ++++ + G G + Sbjct: 125 LTEPGSGSDAAALRTTARREGDA-YVLDGTKQFISGAGAVDLYVVMVRT-GEPGPKGIST 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313 L+ GL + + K+G + T ++ FS N G ++ ++ + Sbjct: 183 LVVPADAPGLSFGPNERKMGWNAQPTRQVIFSGCRVPAANRLGEEGIGFKIAMAGLDGGR 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I S+ G + +L +A+ YAR R G L ++ +AD+A ++ AA + Sbjct: 243 INI----GACSLGGAQSALDKALTYARERRAFGQRLDAFQALQFRLADMATELEAARLMI 298 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + D R + A AR A + K + V A++ GG GY+ E I + Sbjct: 299 YAAAAALD----RGDPDATAR--AAMAKRFATDRGFQVADAALQLHGGYGYLSEYGIEKI 352 Query: 434 YRESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 353 VRDLRVHQILEGTNEIMRLIV 373 >gi|144898057|emb|CAM74921.1| glutaryl-CoA dehydrogenase [Magnetospirillum gryphiswaldense MSR-1] Length = 392 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A++ ++ +K+ DG Y LSG K W +SP++D ++ A+ +G++ Sbjct: 134 FGLTEPDSGSDPASMRTRAKKV-DGGYLLSGQKMWITNSPIADIAVVWAKSDGHDGKIKG 192 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+V R G +++ K+ R++ T E+ F LL + + GP Sbjct: 193 FVVER-----GTKGFTTPKIEGKLSLRASVTGEIVLDEAFVPEDNLLPNASGLAGP---- 243 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A ++ V AE A Y R G L +++ +A++ DIA Sbjct: 244 --FGCLNKARYGIAWGVVGAAEFCWHAARQYTLDRKQFGRPLAANQLIQFKLANMQTDIA 301 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A + R+ D + ++A + K C A + A + GG+G +E Sbjct: 302 LALQAAIRVGRMMD-------DGSWAPEAVSLIKRNNCVKALDIARVARDMHGGNGIADE 354 Query: 428 RSIARH 433 + RH Sbjct: 355 FQVMRH 360 >gi|52842051|ref|YP_095850.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54297736|ref|YP_124105.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris] gi|52629162|gb|AAU27903.1| acyl CoA dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53751521|emb|CAH12939.1| hypothetical protein lpp1787 [Legionella pneumophila str. Paris] Length = 389 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ Q + D Y L G Sbjct: 115 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 159 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W + P +D ++ A+ + + G + ++E G P Q+L +K+G R + T E Sbjct: 160 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 218 Query: 289 LEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 L F N G + + V ++ + ++ A V M+ + + Y Sbjct: 219 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 274 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R + + ++ +AD+ D+ A A + +A + D + ++AA + Sbjct: 275 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 328 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + ++++ +GG+GYI E R R++ I G+ Sbjct: 329 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 372 >gi|332850446|ref|ZP_08432766.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332871897|ref|ZP_08440309.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332875167|ref|ZP_08443000.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|332730717|gb|EGJ62028.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332731111|gb|EGJ62412.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332736611|gb|EGJ67605.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 394 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 104 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 150 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 151 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 209 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 210 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 259 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 260 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 318 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 319 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 371 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 372 QRIYGGTNEIM 382 >gi|320334371|ref|YP_004171082.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] gi|319755660|gb|ADV67417.1| Butyryl-CoA dehydrogenase [Deinococcus maricopensis DSM 21211] Length = 393 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GR--- 252 GLTE G+D + ++ ++ DG + ++G K F++ + +++LA+ + GR Sbjct: 123 GLTEPGSGSDSGGLQTRAEQQPDGSWIINGSKNFITQGSVGGTYVILARTDAPRPGRSKN 182 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + F+ R G R ++K+G RS+ T +L F + L + Sbjct: 183 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDMRVPETALLGTRGQAFK 238 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALD 365 D ++ LD + + M + L A Y R G + + +AD+ Sbjct: 239 D--VMRVLDGGRIGIGAMGLGLGRAAFDFATRYTLEREQFGKAIAHNQAIAFKLADMDTH 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L + A+ D + + AA A++ A C +A++ +GG GYI Sbjct: 297 LEAARLLLRKAADLKDAGRDFTVAAARAKLYATEVGVQACD-------DAIQMLGGYGYI 349 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 +E + R++R++ I G G + V Sbjct: 350 KEYPVERYWRDNRLTRI--GEGTSEV 373 >gi|124002490|ref|ZP_01687343.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina ATCC 23134] gi|123992319|gb|EAY31687.1| acyl-CoA dehydrogenase, long-chain specific [Microscilla marina ATCC 23134] Length = 385 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 15/282 (5%) Query: 176 PKIFSREYDPTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 P I + T + + KT + + +TE G+D+ ++ + + D Y ++G K Sbjct: 102 PYILEYGSEETKQKYLPKTVSGESILAIAMTEPGAGSDLQSMRATAEDKGDH-YLVNGSK 160 Query: 233 WFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+++ ++D ++ + + G LL + + G + K+G + T EL F Sbjct: 161 TFITNGYLADLVVVAVKTDPAQGAKGTSLLLMEAAAEGFSKGKPFEKVGLHAQDTCELFF 220 Query: 292 SNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 N LLG+ G + + L + ++ +L I Y + R G Sbjct: 221 DNVKVPKENLLGEEGKGFGYLMNKLAQERLVVGLGAIGAAEKALETTIQYTKERKAFGKS 280 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 + K +A++A ++ + DE K A+ + KYW + Sbjct: 281 VAQFQNTKYKMAELATEVQIGRVFADYCTELHDEGKLDGATAS-------MVKYWLTDLQ 333 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V E ++ GG GYI + IAR Y ++ I G+ M Sbjct: 334 CKVADECVQLHGGYGYIWDYQIARSYADARVQRIYAGTNEIM 375 >gi|327190845|gb|EGE57910.1| isovaleryl-CoA dehydrogenase protein [Rhizobium etli CNPAF512] Length = 381 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 39/291 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 +P + + PK+ S E+ + L ++E G+D+ ++ + ++ D Y Sbjct: 104 SPEQKRRYLPKLISGEHVGS-------------LAMSEAGAGSDVVSMRLRAERKGD-RY 149 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSN 284 L+G K W ++P +D ++ A+ + VG + L+ E G P G + +K+G R + Sbjct: 150 ILNGTKFWITNAPHADVLVVYAKTDPAVGAKGISALIIEKGMP-GFSVSKKLSKLGMRGS 208 Query: 285 ATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEA 335 T EL F + L+G E +KIL+ + A+++ M+ L Sbjct: 209 DTAELVFEDCEVPAEALMGREG------EGVKILMSGLDYERAVLAAGPLGIMQACLDVV 262 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y R R G + D +M+ IAD+ + + +A A + +A + D ++ +AA A + Sbjct: 263 LPYVRDRKQFGKPIGDFQLMQAKIADMYVALNSARAYVYSVARACDAGRATRTDAAAAIL 322 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A + A V EA++ +GG+GY ++ + R R++ I G+ Sbjct: 323 FA-------SENAVKVSLEAIQALGGAGYTKDWPVERFLRDAKLYDIGAGT 366 >gi|218892413|ref|YP_002441280.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218772639|emb|CAW28422.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 384 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253 LTE G+D A++ + + DG Y L+G K F++ +P + + ++A+ G + Sbjct: 124 LTEPDSGSDAASLKTTA--VRDGQHYVLNGTKRFITNAPQAGIYTVMARTNPAIRGAGGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GVGFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345 Query: 426 EERSIARHYRE 436 + I R YR+ Sbjct: 346 GDYGIERFYRD 356 >gi|89098398|ref|ZP_01171282.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89086947|gb|EAR66064.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 383 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 30/269 (11%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG 254 + + +TE G+D+A I++ D Y L G K F+++ M +D I+ + + + Sbjct: 121 IITAIAMTEPGAGSDLAGISTTAVDEGD-YYLLHGQKTFITNGMHADLVIVACKTDPQA- 178 Query: 255 CFLVPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGD 301 VP+ L + G R +KIG S T EL F N G Sbjct: 179 ---VPKHKGISLLAVERGCKGFSRGRKLDKIGLHSQDTAELIFEDCLVPKENLIGEEGQG 235 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ ++++ AI + + V L + Y + R G + + + +A+ Sbjct: 236 FQYMMKKLQQERLVV----AIAAQAASEVMLELTLSYVKSREAFGRPVGNFQNTQFKMAE 291 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A DI + L E K +++ + A K+ A + AE ++ GG Sbjct: 292 MATDIEMGRSFLDTLNKEHVEGKDITQKVSMA-------KWKLTDNARRIAAECLQLHGG 344 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+EE IAR YR+ P SI G+ M Sbjct: 345 YGYMEEYEIARRYRDIPVASIYAGTNEIM 373 >gi|167644246|ref|YP_001681909.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167346676|gb|ABZ69411.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 382 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 42/276 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P I S E + LTE G+D AA+ ++ + D Y L+G K Sbjct: 109 WLPGIASGE-------------IVTSFALTEAEAGSDSAAVQTRATRDGDD-YVLNGSKR 154 Query: 234 FLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 ++++ + F ++A+ V FLVPR L GL + + K+G + Sbjct: 155 YITNAGKASLFTVMARTNPGAKGGSGVSAFLVPRDLP-----GLTVGKPEKKMGQQGAHI 209 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340 ++ F N + N E K+ + LD + ++ + V +AE + YA Sbjct: 210 HDVTFDNV---RVPAWNRLGAEGEGFKVAMQVLDRGRLHIAAVCVGVAERLLVDCVAYAS 266 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + +++ IAD + AA AL A D + + EAA A++ A Sbjct: 267 ERKQFGQPIASFQLIQAMIADSKTEALAARALVLETARKRDAGEGVTLEAAAAKLFA--- 323 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +M V A++ GG+GY+ + I R YR+ Sbjct: 324 ----SEMVGRVADRAVQIFGGAGYVADYGIERLYRD 355 >gi|119186447|ref|XP_001243830.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 438 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 35/303 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + K W P++ T+ L+E G+D A+ ++ K G Y Sbjct: 158 SAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-Y 202 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 ++G K W +S + FI+ A ++ G + L + G + + K+G R+++ Sbjct: 203 KINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLVEKDTKGFSIAKKEKKLGIRASS 262 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHY 338 T L F + + N+ + K I L+ + ++ LA A + Sbjct: 263 TCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYI 319 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-A 397 R G ++ M+ +A DIAAA AL + A R +EA +M A Sbjct: 320 WNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAA--------RKKEAGQDFVMDA 371 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 + K + ++A V + A+E +GG G++ E + +R+S +I G+ N + + Sbjct: 372 AMAKLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKT 431 Query: 458 LEK 460 L+K Sbjct: 432 LQK 434 >gi|313675129|ref|YP_004053125.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] gi|312941827|gb|ADR21017.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] Length = 599 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 61/300 (20%) Query: 202 LTEKRGGTD-----IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG--RV 253 LTE G+D A+ ++ +K Y L+G K W ++ ++D F + A++E + Sbjct: 152 LTEPDAGSDANSGKTKAVYNEAEKA----YYLTGQKMWITNAGIADVFTVFAKIEDDENL 207 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF----LLGD-------- 301 F+V + E GL ++K+G R+++T ++ F N LLG Sbjct: 208 SAFIVEKGFE-----GLTLGEEEDKMGIRASSTRQV-FLNDVKVPEENLLGQRGEGFKMA 261 Query: 302 LNV-STGPVEDMKILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKR 357 LNV STG ++ + + G+ VS + A+ YA R G + +++ Sbjct: 262 LNVLSTGRIK------------LGIGGLGVSKKAIDYAVEYAVNRKQFGQSISSFGAIQQ 309 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSR------SEEAAYAR------IMAPITKYWCC 405 +A + + A A ++R D+ + S E A A+ I I K + Sbjct: 310 KLAKMVVKTYALQAAAYRTGELIDQKEEEYLKSGMSMEEAKAKAVSAYGIECAIIKVFGT 369 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG--NAMVLDVLNLLEKGTN 463 + V+ E ++ GG G+ EE +AR YR+S + I G+ N M++ V LL+K N Sbjct: 370 EAQDFVVDEGLQIFGGMGFSEEAPMARLYRDSRISRIFEGTNEINRMLI-VDMLLKKAMN 428 >gi|167818752|ref|ZP_02450432.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 91] Length = 1324 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 789 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 846 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 847 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 905 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 906 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 964 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 965 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 1018 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 1019 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1051 >gi|90416754|ref|ZP_01224684.1| putative glutaryl-CoA dehydrogenase protein [marine gamma proteobacterium HTCC2207] gi|90331507|gb|EAS46743.1| putative glutaryl-CoA dehydrogenase protein [marine gamma proteobacterium HTCC2207] Length = 394 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFL 257 GLTE G+D + S+ + +DG Y L+G K W +SP +D F++ A+ + ++ F Sbjct: 139 FGLTEPDYGSDPGGMVSRARS-TDGGYLLNGTKTWISNSPFADVFVVWAKTDDEQIRGF- 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G P GL +++ K+ R + T ++ + F LL ++ GP Sbjct: 197 ---ILEKGMP-GLSAPKIEGKLSLRVSTTGQIVMQDVFVAEEQLLPNVKGLKGPFS---- 248 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAA 369 L++A ++ + AEA +A R + ++P +++ +AD+ DI+ Sbjct: 249 --CLNNARYGIAWGSLGAAEACWHAARTYTMERKQFNRPLAATQLIQLKLADMQTDISLG 306 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 R D++ E + + K C A + +A + +GG+G +E S Sbjct: 307 LQGCLRAGQLMDDSNISPE-------LISLIKRNSCSKALNIARKARDMLGGNGISDEYS 359 Query: 430 IARH 433 + RH Sbjct: 360 VMRH 363 >gi|303317764|ref|XP_003068884.1| short/branched chain specific acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108565|gb|EER26739.1| short/branched chain specific acyl-CoA dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038916|gb|EFW20851.1| acyl-CoA dehydrogenase [Coccidioides posadasii str. Silveira] Length = 438 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 35/303 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 + + K W P++ T+ L+E G+D A+ ++ K G Y Sbjct: 158 SAEIKKKWLPRL--------------ATNTVGSFCLSEPVSGSDAFALQTKAVKTESG-Y 202 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 ++G K W +S + FI+ A ++ G + L + G + + K+G R+++ Sbjct: 203 KINGSKMWITNSMEAGCFIVFANLDPSKGYKGITAFLVEKDTKGFSIAKKEKKLGIRASS 262 Query: 286 TVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHY 338 T L F + + N+ + K I L+ + ++ LA A + Sbjct: 263 TCVLNFDDV---EIPKENLLGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYI 319 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-A 397 R G ++ M+ +A DIAAA AL + A R +EA +M A Sbjct: 320 WNDRKQFGQLIGTFQGMQHQVAQAYTDIAAARALVYNAA--------RKKEAGQDFVMDA 371 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 + K + ++A V + A+E +GG G++ E + +R+S +I G+ N + + Sbjct: 372 AMAKLYASQVAGRVSSSAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKT 431 Query: 458 LEK 460 L+K Sbjct: 432 LQK 434 >gi|226954494|ref|ZP_03824958.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226834765|gb|EEH67148.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 387 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 25/317 (7%) Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI--FSREYDPTNKAPMQKTSVAI-GLGL 202 L AG M+ + + ++LM VH AP I F E P + I L + Sbjct: 74 LLAGVEMAKAASGGVHISLM----VHTIGAPPIQHFGSEELKAKVLPDIISGEKISALAI 129 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLVPR 260 TE GG+D+AA+ ++ + D Y +SG K F++S + +D + + + + + G + Sbjct: 130 TEPGGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGADGISM 188 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317 LL D G+ LK K+G ++ T L F LLG N + + + Sbjct: 189 LLVDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMER 247 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL----S 373 +++ V EA+ +A++R G L+D V++ + D+A + AL + Sbjct: 248 FFLGVVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLEETA 307 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +++ + + + + +A T +C A++ +GG G++ R Sbjct: 308 WKMTQPQLQGADLVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKSERI 360 Query: 434 YRESPANSILLGSGNAM 450 YRE N I G+ M Sbjct: 361 YREVKVNMIGGGAEEIM 377 >gi|126443146|ref|YP_001061749.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126222637|gb|ABN86142.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] Length = 1291 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|307610525|emb|CBX00111.1| hypothetical protein LPW_18561 [Legionella pneumophila 130b] Length = 372 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ Q + D Y L G Sbjct: 98 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 142 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W + P +D ++ A+ + + G + ++E G P Q+L +K+G R + T E Sbjct: 143 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 201 Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 L F N G + + V ++ + ++ A V M+ + + Y Sbjct: 202 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 257 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R + + ++ +AD+ D+ A A + +A + D + ++AA + Sbjct: 258 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 311 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + ++++ +GG+GYI E R R++ I G+ Sbjct: 312 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 355 >gi|296162124|ref|ZP_06844921.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295887630|gb|EFG67451.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 379 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 37/306 (12%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T ++W P P+ + + + +TE G+D+ +I Sbjct: 93 SDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIAMTEPGTGSDLKSI 139 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y ++G K F+S+ ++ D +++ + + G V ++ + G Sbjct: 140 RTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSLIMVETDRAGFRRG 198 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMS 324 R K+G + T EL F N G L+G+ N + P E + I +Y Sbjct: 199 RKLEKVGQAAADTAELFFDNVRVPAGNLIGNENGGFIHLMEELPQERLIIAVY------C 252 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + + L + Y + R + D K +AD+ A L E K Sbjct: 253 AAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYIREHMERK 312 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +EAA A++ A W C I E ++ GG GY+ E IAR + + I Sbjct: 313 LTLQEAAIAKLFA-TEAMWKC------IDEMVQLHGGYGYMLEYPIARAFADMRVTRIFG 365 Query: 445 GSGNAM 450 G+ + Sbjct: 366 GTSEVL 371 >gi|302865185|ref|YP_003833822.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315501734|ref|YP_004080621.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|302568044|gb|ADL44246.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315408353|gb|ADU06470.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 398 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 29/267 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-------VEGRV 253 ++E G+D++AI S+ + D Y L+G K W + S L + V G + Sbjct: 129 MSEPECGSDVSAIKSKAVRDGDN-YVLNGQKMWLTNGAYSSVVATLVKTDTGADSVYGNM 187 Query: 254 GCFLVPRLLEDG---SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVST 306 FL+ + E G + GL +K+G + T E+ L G+ V Sbjct: 188 STFLLEK--EPGFGETAPGLTIPGKIDKMGYKGVETTEMVLDGVTVPASAVLGGEEKVGR 245 Query: 307 GPVEDMK-ILIYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G + M I + + G+ + E A+ YA++RH G L + +A++ Sbjct: 246 GFYQMMDGIEVGRVNVAARACGISIRAFELAVAYAQQRHTFGQPLARHQAVAFKLAEMGT 305 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I AA AL A D + EA A+++A +C + V+ EA GG GY Sbjct: 306 KIEAAHALMVNAARLKDAGQRNDVEAGMAKLLA---SEYCAE----VVQEAFRIHGGYGY 358 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 +E I R RE+P +L+G G + + Sbjct: 359 SKEYEIERLMREAP--FLLIGEGTSEI 383 >gi|217424565|ref|ZP_03456063.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|217392489|gb|EEC32513.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] Length = 1289 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|170940105|emb|CAP65331.1| unnamed protein product [Podospora anserina S mat+] Length = 441 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 26/296 (8%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 W + ++Y P T+ L+E G+D A+ ++ +G Y ++G K Sbjct: 159 WGSETLKKKY-----LPKLATNTVGSFCLSEPVSGSDAFALATKATPTENG-YKINGSKM 212 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 W +S ++ FI+ A ++ G + + D G + + K+G ++++T L F Sbjct: 213 WITNSMEAEFFIVFANLKPEQGYKGISAFIVDKGMKGFSIAKKEKKLGIKASSTCVLNFD 272 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSG 346 + + N+ + K I L+ + + LA A+ Y Sbjct: 273 DV---EVPKENLLGQEGQGYKYAIQILNEGRIGIGAQMTGLALGAWENAVKYVWNDRKQF 329 Query: 347 GILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITKYWC 404 G L+ + M+ IA +IAAA AL + A R +EA +M A + K + Sbjct: 330 GKLVGEFQGMQHQIAQSYTEIAAARALVYNAA--------RKKEAGEDFVMDAAMAKLYA 381 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++A V A+E +GG G++ E + +R+S +I G+ N + + +L+K Sbjct: 382 SQVAGRVSGLAVEWMGGMGFVREGLAEKFFRDSKIGAIYEGTSNIQLNTIAKMLQK 437 >gi|325277814|ref|ZP_08143368.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324097060|gb|EGB95352.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 383 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 31/271 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 P T IG LTE + G++ + ++ + I DG + ++G K F+S+ ++ Sbjct: 113 PRLATGEVIGCFCLTEPQAGSEAHNLRTRAELI-DGQWVINGAKQFVSNARRAGLAIVFA 171 Query: 249 VE----GRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 V G+ G FLVP G R ++K+G R++ T + F N LL Sbjct: 172 VTDPDLGKKGLSAFLVP-----ADNPGFKVDRSEHKMGIRASDTCAVTFDNCRVPAANLL 226 Query: 300 GD----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G+ L ++ +E +I I A ++ R + A+ Y+R R G + + + Sbjct: 227 GERGKGLAIALSNLEGGRIGI----AAQALGIARAAFEAALGYSRDRVQFGKPINEHQSI 282 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+ + + AA L A + EA+ A++ A +MA V + A Sbjct: 283 ANLLADMQVQVNAARLLILHAARLRSAGRPCLSEASQAKLFAS-------EMAERVCSMA 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG GY+E+ + R+YR++ I GS Sbjct: 336 IQVHGGYGYLEDYPVERYYRDARITQIYEGS 366 >gi|121595295|ref|YP_987191.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp. JS42] gi|120607375|gb|ABM43115.1| acyl-CoA dehydrogenase domain protein [Acidovorax sp. JS42] Length = 398 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 25/266 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ + K+ DG Y L G+K W + Sbjct: 114 FGSEAQKQKYLPKLASGEFIGCFGLTEPDHGSDPGSMATHAYKV-DGGYRLKGNKMWITN 172 Query: 237 SPMSDAFIMLA-QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A +VE + + D GL + K+G R++ T E+ + F Sbjct: 173 SPVADVFVVWAKEVEASGTVGQIRGFILDKGMKGLSAPAIHGKVGLRASITGEIVMDDVF 232 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGG 347 ++ GP L+SA ++ + AE A Y R G Sbjct: 233 VPEENAFPEVRGLKGP------FTCLNSARFGIAWGAMGAAEFCWHTARQYTLDRKQFGR 286 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 287 PLAANQLVQKKLADMQTEITLGLQAALRVGRMKDEHQNVVE-------ITSLIKRNNCGK 339 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 340 ALDIARLARDMMGGNGISDEFGVARH 365 >gi|323525673|ref|YP_004227826.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323382675|gb|ADX54766.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 382 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 20/243 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + + D Y L+G K F+S+ I+ A + G Sbjct: 128 LTEPHAGSDTAALRTGAHRDGDH-YVLNGTKQFISNGSEAGVGIVFAITDKAAGKRGAST 186 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313 + D G R+++K+G + T ++ N G G V D + Sbjct: 187 FIIDPKAPGYHVTRIESKLGQHTAHTAQIALEDYRVPAENLLGAEGNGYRTVMGGVSDGR 246 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I A +S R +L A+ YAR R G L + +AD+A + A Sbjct: 247 IGI----AFISAGVARGALDAALKYAREREAYGAPLNRLQAVAFDLADMAAQVEIAWQYC 302 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A D +EA+ I K + +MA V +EA++ GG GY+ + + R+ Sbjct: 303 LHAARLRDAGIDCIKEAS-------IAKLFASEMAEKVCSEAVQIHGGYGYLSDFPVERY 355 Query: 434 YRE 436 R+ Sbjct: 356 LRD 358 >gi|226362565|ref|YP_002780343.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226241050|dbj|BAH51398.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 383 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 35/306 (11%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + + PK+ + E T + LTE GG+D+ Sbjct: 86 MGGHTVVAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDL 132 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266 A+++ + D + W ++ S +L + + + G +V L+E G Sbjct: 133 QAMSTTAKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIV--LVEHGP 190 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 GL R K+G + T EL F N L G G + + A Sbjct: 191 --GLTVSRDLPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVAC 248 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 ++ +L +++ YA++R G + + +AD+A + AA L++ A +D Sbjct: 249 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDS 308 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 EA A++ A ++A + A+ GG GY E + R++R++P + Sbjct: 309 GDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL--M 359 Query: 443 LLGSGN 448 ++G G Sbjct: 360 IVGEGT 365 >gi|167033440|ref|YP_001668671.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166859928|gb|ABY98335.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 383 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 48/314 (15%) Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 G +MS SV ++A T + + W P++ S E IG LTE Sbjct: 85 GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259 + G++ + ++ + + DG + ++G K F+S+ I+ A + +G FLVP Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312 +P G R ++K+G R++ T + F N LLG+ L ++ +E Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANLLGERGKGLAIALSNLEGG 243 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ R + A+ Y+R R G + + + +AD+ + + AA L Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRVQFGKPINEHQSIANLLADMQVQVNAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K EA+ A++ A +MA V + A++ GG GY+E+ + R Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352 Query: 433 HYRESPANSILLGS 446 +YR++ I GS Sbjct: 353 YYRDARITQIYEGS 366 >gi|329851045|ref|ZP_08265802.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19] gi|328839891|gb|EGF89463.1| isobutyryl-CoA dehydrogenase [Asticcacaulis biprosthecum C19] Length = 371 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 22/256 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ + D + L+G K F+S + +SD ++++A+++ + FLV + Sbjct: 121 LTEPGSGSDAASMKTRAVRDGDS-FVLNGSKQFISGAGVSDLYVVMARLDDGISTFLVVK 179 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317 GL + + K+G + T ++ F N + N+ P + K + Sbjct: 180 -----DTPGLSFGANEKKMGWNAQPTRQVTFDN---LCIPADNLLGTPGDGFKYAMKGLD 231 Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ A S+ G + +L A+ YA R G L + +AD+ +++A+ L + Sbjct: 232 GGRLNVAACSLGGAQDALDRALAYAGERSQFGKHLNAFQATQFKLADMETELSASRTLLY 291 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D +++ +A MA K + + +A++ GG GY+ + + R Sbjct: 292 EAAAKLD---AKTPDATRWCAMA---KRFVTDTCSKIANDALQIHGGYGYLHDYGVERIV 345 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 346 RDLRVHQILEGTNEIM 361 >gi|260428261|ref|ZP_05782240.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45] gi|260422753|gb|EEX16004.1| isovaleryl-CoA dehydrogenase [Citreicella sp. SE45] Length = 387 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKKND-RFVLNGNKYWITNGPDADTLVVYAKTDPDAGSRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + S G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKSMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFQNILGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLTERKQFGQAIGSFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370 >gi|126456025|ref|YP_001074694.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|242311146|ref|ZP_04810163.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|126229793|gb|ABN93206.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|242134385|gb|EES20788.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] Length = 1283 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 749 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 806 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 807 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 865 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 866 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 924 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 925 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 978 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 979 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1011 >gi|119386341|ref|YP_917396.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119376936|gb|ABL71700.1| isovaleryl-CoA dehydrogenase [Paracoccus denitrificans PD1222] Length = 386 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 57/257 (22%), Positives = 120/257 (46%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E+ G+D+ + + +K +D Y L+G+K W ++P + ++ A+ + G + Sbjct: 128 LAMSEEGAGSDVVGMKLRAEKRND-RYVLNGNKYWITNAPDAHTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G +K+G R + T EL F + F +LG + +++L Sbjct: 187 TAFIVERGMKGFSTSPHFDKLGMRGSNTGELIFEDCEVPFENVLG------AEGKGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M L E + Y + R G + +M+ IAD+ + + A Sbjct: 241 MSGLDYERLVLSGIGTGIMAACLDEVMPYVKERKQFGQPIGSFQLMQGKIADMYVALNTA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D K ++AA A + + + A +A++ +GG+G++ + Sbjct: 301 RAYVYEVAKACDAGKVTRQDAAGAVL-------YASEQAMVQAHQAVQALGGAGFLNDSV 353 Query: 430 IARHYRESPANSILLGS 446 ++R +R++ I G+ Sbjct: 354 VSRLFRDAKLMEIGAGT 370 >gi|167565173|ref|ZP_02358089.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis EO147] Length = 1282 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 18/282 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AI S Q+I + +SG K W SS + + A+ G ++ Sbjct: 752 LTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSSAWAGVINVFAKQADGTG--MIGL 809 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R T+ L+ + + LG L + Sbjct: 810 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGALGQGMAVAQQTMNFAR 868 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V GM+ A+ +H Y RR + G+L+D P+ ++ + D+ I AL +L Sbjct: 869 LGIGAVCVGGMK-RCAQLMHRYGARRQIGTGLLLDNPLSRQRLGDLRHRIDGLNALIEQL 927 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ I K + E M+ +GG GYIE + +R+ Sbjct: 928 AADFDAGRDAPEDGLL------IAKILGSEFLSQSSDELMQMLGGRGYIETNLAPQIFRD 981 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGS 478 + I G ++ + + L G++ L L++ G+ Sbjct: 982 ARLPRIFEGPTETLLAHLGSRLLNGSD---DLLGYLDERTGA 1020 >gi|318059027|ref|ZP_07977750.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG] gi|318076807|ref|ZP_07984139.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF] Length = 390 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA++++ + D + L+G K F+S + ++ G G + Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L D GL + ++K+G + T V + G ++ + ++ Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ G R +L ++ + R G LI+ ++ +AD+A ++AAA AL Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A++ D ++ + + + K + + A++ GG GY+ E I + Sbjct: 308 QAADALDRKDPQAPQ------LIAMAKRFATDSGFHIADRALQLHGGYGYLHEYGIEKIV 361 Query: 435 RESPANSILLGSGNAM 450 R+ + IL GS M Sbjct: 362 RDLRVHQILEGSNEIM 377 >gi|167848625|ref|ZP_02474133.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei B7210] Length = 1294 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 989 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021 >gi|157374123|ref|YP_001472723.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316497|gb|ABV35595.1| acyl-CoA dehydrogenase domain protein [Shewanella sediminis HAW-EB3] Length = 391 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 18/238 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ ++I G Y ++G K W +SP++D FI+ A++EG++ F Sbjct: 136 FGLTEPDAGSDPGGMKTRAERIEGG-YRINGAKIWITNSPIADIFIVWAKLEGKIRGF-- 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G P GL +++ K R++ T E+ N L+ ++ GP Sbjct: 193 --ILEKGMP-GLSAPKIEGKFSLRASVTGEIVMDNVEVPETALMPNVEGLKGPFG----- 244 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L+ A ++ + AE +A R++ I ++P+ + L + T +S Sbjct: 245 -CLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLASNQLIQKKL-VDMQTEISLG 302 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L + +A ++ I + C K A + + + GG+G +E I RH Sbjct: 303 LFACLQAGRLMDNDALAVEAISMIKRNSCGK-ALDIARMSRDMHGGNGISDEFHIIRH 359 >gi|148359370|ref|YP_001250577.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby] gi|296107417|ref|YP_003619117.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|148281143|gb|ABQ55231.1| acyl CoA dehydrogenase [Legionella pneumophila str. Corby] gi|295649318|gb|ADG25165.1| Acyl-CoA dehydrogenase [Legionella pneumophila 2300/99 Alcoy] Length = 386 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 37/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ Q + D Y L G Sbjct: 112 QKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLQARSAGDK-YILDG 156 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W + P +D ++ A+ + + G + ++E G P Q+L +K+G R + T E Sbjct: 157 TKMWITNGPDADVLVVYAKTDKQAGSKGITAFIIEKGMPGFKTAQKL-DKLGMRGSNTCE 215 Query: 289 LEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 L F N G + + V ++ + ++ A V M+ + + Y Sbjct: 216 LVFDQCEVPSENVLGTVNQGVKVLMSGLDYERTIL----AAGPVGIMQACMDVVLPYVHE 271 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R + + ++ +AD+ D+ A A + +A + D + ++AA + Sbjct: 272 RKQFNQAIGEFQFIQGKLADMYTDLNACRAYLYAVAKACDNGRVSRKDAAGVIL------ 325 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + ++++ +GG+GYI E R R++ I G+ Sbjct: 326 -YTAEKATQMALQSIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 369 >gi|126642320|ref|YP_001085304.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii ATCC 17978] Length = 363 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 73 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 119 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 120 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 178 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 179 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 228 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 229 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 287 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V + ++ GG GY+ E I+R + ++ Sbjct: 288 YQEGKLDVETAA-------ALKSFSTDMQMKVADDLLQLFGGYGYMTEYPISRFFVDARI 340 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 341 QRIYGGTNEIM 351 >gi|21221230|ref|NP_627009.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|256787588|ref|ZP_05526019.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289771481|ref|ZP_06530859.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|5524294|gb|AAD44195.1|AF142581_1 acyl-CoA dehydrogenase [Streptomyces coelicolor] gi|7544043|emb|CAB87216.1| acyl-CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|289701680|gb|EFD69109.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 386 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 50/316 (15%) Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222 L T ++W P++ S E + GLTE GG+D A + + + Sbjct: 100 LFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLDEA 146 Query: 223 DGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQ 273 + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 147 TNEWVINGTKCFITNSGTDITGLVTVTAVTGRKPDGRPLISSIIVP----SGTP-GFTVA 201 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +K+G ++ T EL F++ LLG+L + L LD ++++ + Sbjct: 202 APYSKVGWNASDTRELSFADVRVPAANLLGELGRGYA-----QFLRILDEGRVAIAALGT 256 Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 LA E++ YA+ RH G + ++ IAD +++ A TA RLA + +A S Sbjct: 257 GLAQGCVDESVAYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDAAS 309 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 R + A + K + +A +A + GG G++ E +AR +R+ A + +G Sbjct: 310 RLVAGEPFKKEAALAKLYSSTVAVDNARDATQVHGGYGFMNEYPVARMWRD--AKILEIG 367 Query: 446 SGNAMVLDVLNLLEKG 461 G + V +L E G Sbjct: 368 EGTSEVQRMLIARELG 383 >gi|284163794|ref|YP_003402073.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284013449|gb|ADB59400.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 387 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 23/246 (9%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-- 252 A+G GLTE G++ +A+ ++ ++ DG Y L+G K W +SP+SD ++ A+ + Sbjct: 124 AVGCFGLTEPEHGSNPSAMETRAERDGDG-YILNGSKTWITNSPISDVAVVWARDQSDPD 182 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 V FLV + +G+ ++ K+ R++ T E+ ++ +L ++ G Sbjct: 183 TPVRGFLV-----ETDRDGVSTNKITEKLSLRASITGEIGLNDVHVPEENVLPGVSGMKG 237 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 P+ + Y A +V R EA YA+ R GG + + +R +A++ I Sbjct: 238 PLSCLTQARY-GIAWGAVGAARDCFEEARQYAKDRDQFGGPIGRFQLQQRKLAEMGTQIT 296 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L++RLA + + R + + A K + A A E +GG+G + Sbjct: 297 LAQLLAYRLAELKERGEMRPQHVSMA-------KRNNVRTARDQARIAREMLGGNGITTD 349 Query: 428 RSIARH 433 S RH Sbjct: 350 YSPMRH 355 >gi|126739316|ref|ZP_01755009.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] gi|126719416|gb|EBA16125.1| acyl-CoA dehydrogenase [Roseobacter sp. SK209-2-6] Length = 381 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 34/264 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ +K ++G Y L+G+K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRAEKTNEG-YTLNGNKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 +EDG+P GL + + K+G +S T +++F + + + E+ K Y Sbjct: 183 --YVEDGTP-GLSFGGQEIKMGWKSQPTSQVQFDDC------KIPANNLVGEEGKGFRY- 232 Query: 319 DSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 A+M + G R+++A + Y R G + ++ +AD+ +++ Sbjct: 233 --AMMGLDGGRLNIASCSLGAAQAGLDMTLQYMSERKAFGKSIDQFQGLQFRLADMEIEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D+ A A + K + + ++ + ++ GG GY+ Sbjct: 291 QAARVFLRQAAWKLDKG------APDASKHCAMAKKFVTEAGSKIVDQCLQLHGGYGYLA 344 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + I + R+ + IL G+ M Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368 >gi|297563334|ref|YP_003682308.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847782|gb|ADH69802.1| acyl-CoA dehydrogenase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 384 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 20/255 (7%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGCFL 257 GL+E+ G+D A++ +Q DG + L+G K W ++ +S + +LA EG G + Sbjct: 127 GLSEREAGSDTASMRTQAVADGDG-WILNGQKSWITNAGVSKYYTVLAVTDPEGARGRNV 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 +L G + K+G + + T EL F N + GD + P E +KI L Sbjct: 186 SAFVLH-ADDEGFTLGEPERKLGIKGSPTRELFFDNV--RVPGD-RIVGAPGEGLKIALR 241 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD +++ V +A +A+ Y + R G + D ++ +AD+A+ + A Sbjct: 242 TLDHTRVTIGAQAVGIAQGALDQAVAYVKERKQFGRHIADFQGVQFMLADMAMKLETARQ 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + + A AKS + K + A + +A++ +GG+GY+++ + Sbjct: 302 MVYVAA-----AKSERGDDDLP-FYGAAAKCFASDAAMEITTDAVQLLGGAGYVKDFPLE 355 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 356 RMMRDAKITQIYEGT 370 >gi|254488179|ref|ZP_05101384.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214045048|gb|EEB85686.1| short-chain specific acyl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 384 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 36/296 (12%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI-GLGLTEKRGGTDIAAITSQGQK 220 ++L TP + W PK ++ AI LTE + G+D+A T ++ Sbjct: 102 ISLFGTPEQQEAWLPKT--------------RSGAAISAFALTEPQSGSDVANSTMTAER 147 Query: 221 ISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNK 278 D Y L+G K W + ++D + + A+ G L +L G P RL+ Sbjct: 148 DGDD-YVLNGEKTWISNGGIADVYTLFARTGEAPGARGLSAFILPAGLPGFEIADRLQ-V 205 Query: 279 IGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS-GM-RVSLA 333 I AT L F++ +LG G M +L S + + + G R +L Sbjct: 206 IAPHPLAT--LRFTDCRVPASAMLG--AQGQGFAIAMSVLDVFRSTVAAAALGFARRALD 261 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAY 392 EA+ R V G L D +++ IAD+A+D+ A+ L +R A D+ R + EAA Sbjct: 262 EALKRVSTREVQGKPLADLQMVQGHIADMAVDVDASALLIYRAAWLKDQGAPRVTREAAM 321 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 A++ A A VI +A++ GG G ++ YRE A I G+ + Sbjct: 322 AKLFA-------TDHAQIVIDKAVQLFGGDGVRNGMAVESLYREIRALRIYEGASD 370 >gi|167905574|ref|ZP_02492779.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei NCTC 13177] Length = 1291 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|145601203|ref|XP_363106.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145009233|gb|EDJ93944.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 445 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ + SDG + +SG K W +S +D FI+ A + G + Sbjct: 186 LSEPVSGSDAFALATKATETSDG-FKISGSKMWITNSMEADFFIVFANLNPDKGYKGITA 244 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMK 313 + + G + + K+G R+++T VE+ N G + G + + + Sbjct: 245 FIVEKGTKGFSIAKKEKKLGIRASSTCVINFDDVEIPKENLLGERGAGYKYAIGLLNEGR 304 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I +A M+ + A + R G + + M+ +A ++IAAA AL Sbjct: 305 IGI---AAQMTGLALGAWENAARYCYNDRKQFGQFIGEFQGMQHQMAQSYVEIAAARALV 361 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + + +AA A++ + ++A V A+E +GG G++ E + Sbjct: 362 YNAARKKEAGEDFVRDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGLAEKF 414 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + L+K Sbjct: 415 FRDSKIGAIYEGTSNIQLNTIAKSLQK 441 >gi|186472522|ref|YP_001859864.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184194854|gb|ACC72818.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 384 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GRVG 254 LTE G+D A++ + + D Y ++G K F++ +P + + ++A+ G + Sbjct: 124 LTEPGSGSDAASLRTTALRDGDH-YVINGTKRFITNAPEAGIYTVMARTSPDSKGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVE 310 F+V E G+P GL ++ K+G + T ++ F N + G V G Sbjct: 183 AFIV----EKGTP-GLSLGKIDKKMGQKGAHTCDVIFENCRVPASNMIGGKEGV--GFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + +S + V AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHISAICVGAAERMLDDALRYAMERKQFGQPIAEFQLVQAMLADSRAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA ++ A DE S EA+ K + +M V A++ GG+GY+ Sbjct: 293 IYAARSMVLDAARRRDEKHDVSTEAS-------CCKLFASEMCGRVADRAVQIHGGAGYV 345 Query: 426 EERSIARHYRE 436 + ++ R YR+ Sbjct: 346 SDYAVERFYRD 356 >gi|298207516|ref|YP_003715695.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus HTCC2559] gi|83850152|gb|EAP88020.1| Acyl-CoA dehydrogenase-like protein [Croceibacter atlanticus HTCC2559] Length = 392 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ +T+ + D Y L+G K W +SP D ++ A+ EGR+ + Sbjct: 136 FGLTEPDHGSNPGGMTTNFKDNGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G NK R++AT EL F + + N+ G L Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQDV---KVPKENLLPGKSGLGAPLGC 246 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDSA ++ + A A+ Y++ R G + + ++ +A++ +I A L Sbjct: 247 LDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIAGFQLQQKKLAEMITEITKAQLL 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++RL +E K+ S + + A K ++A + EA + +GG G E SI R Sbjct: 307 AWRLGVLREEGKATSAQISMA-------KRNNVEVAINIAREARQMLGGMGITGEYSIMR 359 Query: 433 H 433 H Sbjct: 360 H 360 >gi|300770148|ref|ZP_07080027.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] gi|300762624|gb|EFK59441.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33861] Length = 379 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D + + + D Y L+G K W + +D ++++AQ G + Sbjct: 123 FALSEPEAGSDATSQHTLAEDKGDH-YLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306 L+ + G +NK+G RS+ T L FS+ FGF + Sbjct: 182 NVLIVEKGMEGFTIGPKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDG 241 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G +I I + ++ ++LA YA+ R G + + ++ +AD+ ++I Sbjct: 242 G-----RIGIAAQALGIAAGAYELALA----YAKERKTFGKPISEHQAIQFKLADMEMEI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A D + + AA A++ A ++A EA++ GG GY++ Sbjct: 293 EAARLLIHKAAWLKDNGQPYGKAAAMAKLFA-------SEVAMKTTIEAIQIHGGYGYVK 345 Query: 427 ERSIARHYRESPANSILLGS 446 E + R R++ I G+ Sbjct: 346 EYHVERLMRDAKITQIYEGT 365 >gi|225628887|ref|ZP_03786921.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|254706042|ref|ZP_05167870.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10] gi|254711660|ref|ZP_05173471.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|254712274|ref|ZP_05174085.1| acyl-CoA dehydrogenase [Brucella ceti M644/93/1] gi|254715345|ref|ZP_05177156.1| acyl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|256029706|ref|ZP_05443320.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256157859|ref|ZP_05455777.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|256253180|ref|ZP_05458716.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|260167205|ref|ZP_05754016.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261217074|ref|ZP_05931355.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261220286|ref|ZP_05934567.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|261313479|ref|ZP_05952676.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261319284|ref|ZP_05958481.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261319944|ref|ZP_05959141.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261756609|ref|ZP_06000318.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265986717|ref|ZP_06099274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265996367|ref|ZP_06108924.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|225616733|gb|EEH13781.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|260918870|gb|EEX85523.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|260922163|gb|EEX88731.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261292634|gb|EEX96130.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261298507|gb|EEY02004.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261302505|gb|EEY06002.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261736593|gb|EEY24589.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|262550664|gb|EEZ06825.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|264658914|gb|EEZ29175.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 375 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|167462606|ref|ZP_02327695.1| butyryl-CoA dehydrogenase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381522|ref|ZP_08055501.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154529|gb|EFX46826.1| acyl-CoA dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 592 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 31/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + DG Y L+G K F+++ +D FI+ A+V+G+ F+V Sbjct: 147 LTEPASGSDALGAKTTAKLSEDGQHYILNGSKIFITNAGFADIFIVYAKVDGKDFSAFIV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 + + G + K+G + ++T L F + LLG+ V G + IL Sbjct: 207 EKEMP-----GFSLGPEEKKMGIKGSSTRPLYFEDCKVPVENLLGE--VGRGHIIAFNIL 259 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + + G + ++ ++ YA R G + P++ + +AD+ + A + Sbjct: 260 NIGRFKLGAGCLG--GAKEAIEHSVKYANTRKQFGTEISSFPLIGKKLADMNIRTFVAES 317 Query: 372 LSFRLA------------NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + +R + +S D K ++ A + I K + ++ V EA++ Sbjct: 318 MVYRTSGLIDHILKDLDHSSPDAGKQSAKGIAEYALECSINKVFASEVLDFVADEAVQIH 377 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG G+ +E + R YR+S N I G+ Sbjct: 378 GGYGFTQEYKVERIYRDSRINRIFEGT 404 >gi|25453061|sp|Q9FS87|IVD2_SOLTU RecName: Full=Isovaleryl-CoA dehydrogenase 2, mitochondrial; Short=IVD 2; Flags: Precursor gi|10129810|emb|CAC08234.1| isovaleryl-CoA dehydrogenase [Solanum tuberosum] Length = 401 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/251 (20%), Positives = 109/251 (43%), Gaps = 12/251 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ G Y L+G+K W + P + ++ A+ + + Sbjct: 143 LAMSEPDAGSDVVSMKCKADRVEGG-YVLNGNKMWCTNGPTAQTLVVYAKTDVTASSKGI 201 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F N F +LG + + L Sbjct: 202 TAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQVGKGVYVLMSGLDL 261 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A V M+ L + Y ++R G + + ++ +AD+ + ++ + + Sbjct: 262 ERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQSSRSYLYS 321 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A D +++ A + A + A V +A++C+GG+GY+ E R R Sbjct: 322 VARECDSGTINTKDCAGVILSA-------AERATQVALQAIQCLGGNGYVNEYPTGRFLR 374 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 375 DAKLYEIGAGT 385 >gi|53721523|ref|YP_110508.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei K96243] gi|254263364|ref|ZP_04954229.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] gi|52211937|emb|CAH37942.1| putative non-ribosomal peptide synthetase [Burkholderia pseudomallei K96243] gi|254214366|gb|EET03751.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] Length = 1291 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|258510174|ref|YP_003183608.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476900|gb|ACV57219.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 388 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 19/265 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA 247 P T IG LTE + G++ AAI + K D Y L+G K +++ +P + F ++A Sbjct: 112 PKMATGEWIGAFALTEPQAGSNAAAIKTTAVKKGDR-YILNGQKIYITNAPYAHVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304 + G + + + G ++ K+G + T ++ F + + + NV Sbjct: 171 VTDPSKGAKGITSFIVERDFPGFRVGHIEKKMGLHGSHTAQIFFED---MEVPEENVLGR 227 Query: 305 -STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G V +KIL + + + + L +++ +A R G + +Q +++ +A+ Sbjct: 228 EGEGYVNALKILANGRAGLAARCLGSCEYLLDKSLAFAHERIQFGKPIFEQQIIQHYLAE 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +AL+I +R+A D+ + +EAA + K + ++ V +A++ GG Sbjct: 288 MALEIELLRTFVYRVAWMTDQKMNVIKEAA-------MLKLYGSEVYNRVADKAVQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G+I E I R YR++ I G+ Sbjct: 341 LGFIAEYPIERFYRDARITRIYEGT 365 >gi|289580495|ref|YP_003478961.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] gi|289530048|gb|ADD04399.1| acyl-CoA dehydrogenase domain protein [Natrialba magadii ATCC 43099] Length = 377 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 46/268 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHK-WFLSSPMSDAFIMLAQVE----GR 252 L+E G++ A +T++ K+ +G Y ++G K W + + ++ A+ + Sbjct: 120 FALSEPDAGSNPAEMTTEA-KLDEGAGEYVINGKKQWITNGERAGVVVLFAKTDRDDPNT 178 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED- 311 V FLVP+ +G+ + ++K+G R+ S+T + D+ + P E+ Sbjct: 179 VTQFLVPK-----DTDGVEVGKKEDKLGLRA--------SDTTTLIFDDVRI---PAENR 222 Query: 312 -MKILIYLDSAIMSVSGMRVSLA-EAI-----------HYARRRHVSGGILIDQPVMKRA 358 ++ L +A ++G R+++A +A+ YA R G +I+ + Sbjct: 223 LTEVGSGLKAAFSILTGGRIAIASQAVGVAQAALDAATAYANEREQFGQPIIEHQAIGHK 282 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ D+ AA L+ A R E A + KY+ + A V EA++ Sbjct: 283 LADMQTDVQAARLLTRDAA--------RKNEDGVDPTAAAMAKYFASEAAVDVANEAVQV 334 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG GY ++ + R+YR++ +I G+ Sbjct: 335 HGGYGYTKDFDVERYYRDAKITTIYEGT 362 >gi|333022890|ref|ZP_08450954.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332742742|gb|EGJ73183.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 390 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA++++ + D + L+G K F+S + ++ G G + Sbjct: 133 LTEPGAGSDAAALSTRAVRDGDD-WVLTGVKQFISGAGAARLYLVMARTGGAGPDGITAF 191 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 L D GL + ++K+G + T V + G ++ + ++ Sbjct: 192 LVDKDDPGLGFGPNEHKMGWNAQPTRQVILDGVRVPADRVLGAEGQGFRIAMNGLNGGRL 251 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ G R +L ++ + R G LI+ ++ +AD+A ++AAA AL Sbjct: 252 GI----AACSLGGARSALDRSLQHLTEREAFGQPLIESEALRFRLADMATELAAARALLH 307 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + A++ D ++ + + + K + + A++ GG GY+ E I + Sbjct: 308 QAADALDRKDPQAPQ------LIAMAKRFATDSGFRIADRALQLHGGYGYLHEYGIEKIV 361 Query: 435 RESPANSILLGSGNAM 450 R+ + IL GS M Sbjct: 362 RDLRVHQILEGSNEIM 377 >gi|254284159|ref|ZP_04959127.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] gi|219680362|gb|EED36711.1| butyryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] Length = 392 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 34/255 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 GL LTE GTD+ AI + + D Y ++G K W + A +L + + Sbjct: 129 GLALTEPNAGTDLQAIRTTAVRDGDD-YVINGTKTWITNGIQGSAVALLVKTDPNADPRY 187 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD-----L 302 + F+ P+ G + K+G + + EL F + + L+G Sbjct: 188 KGMSLFIAPK------GEGFTVGKKLKKLGYNAIDSAELVFEDYRLSADHLIGGEEGKGF 241 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 +TG +E L ++ A V SL A YA+ RH G + + ++ + ++ Sbjct: 242 FQATGGLE----LGRINVAARGVGLCDGSLRLATEYAQTRHTMGKPICEHQAIQLKLGEM 297 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A AA ++ A+++D + EA A KY+ + A E+M GG Sbjct: 298 ATRARAARLMTLDAADAYDSGQRCDMEAGMA-------KYFASEAAVRNSEESMRIHGGY 350 Query: 423 GYIEERSIARHYRES 437 GY +E I R+YR+S Sbjct: 351 GYSKEYEIERYYRDS 365 >gi|118473137|ref|YP_889729.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118174424|gb|ABK75320.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 382 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + ++ D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTRADLDGDH-YVINGAKTYITSGVRADYVVTAARTGGPGAGGVS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 ++ D G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAE 242 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A + +G + L + + R R G LI + ++ +A +A I A + + Sbjct: 243 RVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHV 302 Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 ++ E +A+ A W V +A++ GG GY+ E + R YR Sbjct: 303 VERQLAGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 355 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 356 D--MRILGIGGGTTEILTSL 373 >gi|114764710|ref|ZP_01443895.1| isovaleryl-CoA dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114542910|gb|EAU45931.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. HTCC2601] Length = 387 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D + L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLRAEKKND-RFVLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + S G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKSMTGFTTSPHFDKLGMRGSNTAELIFDDVEVPFENILGEEGKGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGQPIGSFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370 >gi|111022678|ref|YP_705650.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110822208|gb|ABG97492.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 386 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 50/285 (17%) Query: 188 KAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML 246 KAPM TS+A TE G+D A+I + +++ DG Y LSG K W ++ + +++ Sbjct: 125 KAPM--TSLAT----TEPGSGSDAASIVTTAERV-DGGYRLSGQKAWISNAGAAQFYVVF 177 Query: 247 AQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------ 295 A+ + G V F LLE G+ G+ + K+G R+ E+ F N F Sbjct: 178 AKTDRTQRSGGVSAF----LLEKGA-EGMTFGEPMKKMGQRAIVCREIFFDNVFVPEENR 232 Query: 296 ------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 GF L+G ++S + +V R + A+ YA+ R G Sbjct: 233 LGEEGQGFYGLMGTFDISR-----------VVLGAAAVGAARAAYEYALDYAKTRKQFGV 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 +I+ + +AD+A I +A L A D + AR +A + K + Sbjct: 282 PIIEHQAVAFRLADMATRIESARLLVHHAARIIDSGGN-------ARGIAAMAKLTASET 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 A V A++ +GG GY E + + R+ I G+ + M L Sbjct: 335 AMFVTHAAVQTLGGWGYSREYPVEQWMRDVKLEEIEEGTSDIMKL 379 >gi|23098143|ref|NP_691609.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22776368|dbj|BAC12644.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 384 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 17/264 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P+ + IG LTE G++ +A+ + K D Y L+G K ++++ ++ F ++A Sbjct: 112 PLMASGEKIGAFALTEPEAGSNASALKTSAIKKKDK-YILNGTKHYITNATEAEVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 + G + + + S G ++ K+G + + + E+ + + LLG+ Sbjct: 171 VTDPAKGAKGISSFIVEKSNLGFHVGAVEEKMGLKGSHSAEIILDDCEVSVENLLGE--E 228 Query: 305 STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G V +KIL + + + + + L + YA R G +ID + +A++ Sbjct: 229 GQGYVNALKILTNGRAGLAARNLGSCQKLLDMSTTYAIERQQFGTSIIDHQAVAHMLAEM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A++I A AL++++A D ++ +EAA + K + ++ V +A++ GG Sbjct: 289 AVEIEALRALTYKVAWMVDNGENVIKEAA-------MLKLYGSEVYNRVADKAVQVHGGI 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI + + R+YR++ I G+ Sbjct: 342 GYISDFPVERYYRDARITRIYEGT 365 >gi|23100122|ref|NP_693588.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22778354|dbj|BAC14623.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 388 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 23/264 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI--YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-C 255 + +TE G+D+ I + +G+ Y L+G K F+++ D I++A+ + V Sbjct: 128 IAMTEPGAGSDLQRIKTTA-NFDEGLNGYVLNGSKTFITNGQHCDFAIVVAKTKVDVKPS 186 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D NG + KIG + T EL F + LL + ++ G + +L Sbjct: 187 KGISLFIVDAKKNGFTKGKNLEKIGLHACDTSELYFED---ILLDESDILGGVNQGFSVL 243 Query: 316 I------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L A +V+ M L + + Y + R + G L + +A++ + Sbjct: 244 MNELPRERLIVANCAVASMEGVLTDTVSYVKERELFGTTLDQFQHTQFTLAELQTKV--- 300 Query: 370 TALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 R+ SF DE +R E A + K C ++ VI ++ GG GY+ E Sbjct: 301 -----RVQRSFADECTTRCIEGNLDTATASMAKLSCTEVQGEVIDRCLQLFGGYGYMLEY 355 Query: 429 SIARHYRESPANSILLGSGNAMVL 452 IAR Y ++ I G+ M L Sbjct: 356 PIARAYADARVQRIYGGTSEVMKL 379 >gi|329912390|ref|ZP_08275738.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327545621|gb|EGF30781.1| putative acyl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 604 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 54/304 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG-- 254 L+E + G+ ++ I ++ + +DG Y L+G+K ++S+ + ++LA+V G G Sbjct: 164 LSEPQAGSSLSDIVTRAEPQADGTYRLTGNKMWISAGEHELAENIVHLVLAKVPGPDGKL 223 Query: 255 --------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF---------- 291 F+VP+ L + G N + L +K+G R L F Sbjct: 224 IPGVKGISLFIVPKKLVNADGTSGERNDVVLAGLNHKMGYRGTTNCLLNFGEGKFTPQGK 283 Query: 292 SNTFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 + G+L+G ++ + M +I + L + ++ +G A+ YAR R Sbjct: 284 AGAIGYLVGTVHKGLANMFHMMNEARIGVGLGAVMLGYTGY----LHALDYARNRPQGRA 339 Query: 348 ILIDQPVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYAR- 394 P M +R + + AL+ + D+ ++ + EE A Sbjct: 340 PQAKDPAMPQLPIIEHTDVRRMLLAQKSYVEGGLALALYCSKLVDDERTATPEERKRATL 399 Query: 395 ---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 I+ PI K W + A++ GG GY E ++ + YR++ N I G+ Sbjct: 400 LLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQG 459 Query: 452 LDVL 455 LD+L Sbjct: 460 LDLL 463 >gi|298242627|ref|ZP_06966434.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297555681|gb|EFH89545.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 32/277 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR----- 252 GLTE G+D ++ DG + ++G K F+++ ++ + + V G+ Sbjct: 123 FGLTEAEAGSDSGGTRTRAVLKEDGQWHINGSKVFITNAGTNITGGVTITAVTGQRPDGR 182 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + +VP+ G+P G K+G +++ T L F ++ + N+ + Sbjct: 183 KEITNLIVPK----GTP-GYVIGNPYKKMGWKASDTRPLSFEEC---MVPEENILGKRGD 234 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 K + LD+ ++++ + V LA EA+ YAR R G + ++ +AD+ + Sbjct: 235 GFKQFMQILDAGRVAIAALSVGLAQACLDEALSYARERKQFGKSISTYQAIQFKLADMDM 294 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A + ++ A + K EA+ A++ A T A +A++ GG G+ Sbjct: 295 EIELARLMYYKAAWLHMQGKPYRREASMAKLFASET-------AKRAADQAVQIHGGYGF 347 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 ++E ++R++R N I G G + V +L E G Sbjct: 348 MDEYPVSRYWRSVKINEI--GEGTSEVQRMLIAKELG 382 >gi|118465554|ref|YP_881791.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118166841|gb|ABK67738.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 380 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 47/292 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P I S E + + + +TE G+D+A I + + D + ++G K Sbjct: 111 WLPGIVSGE-------------LIVAVAMTEPGAGSDLAGIRTSAVRDGDD-WIINGAKT 156 Query: 234 FLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+SS ++ D +++ + + G L+ + G R K+G T EL F Sbjct: 157 FISSGINCDLVVVVCRTDPEAGHKGFTLLVVEAGMEGFSRGRKLEKMGLHYQDTAELAFE 216 Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 N F L+ +L P E + I AI +++G R + + + Y Sbjct: 217 NVRVPSANLLGKEGRGFYHLMHNL-----PSERLSI------AISAIAGARETWRQTLQY 265 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A+ R G + + +A++ ++ R + + + + EA+ A Sbjct: 266 AKDRKAFGQSIGSFQHNRFLLAEMDTELEIGEQYIDRCLRAVVDGELTAVEASKA----- 320 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+WC + A VI ++ GG GY+ E +AR Y ++ +I G+ M Sbjct: 321 --KWWCTETAKKVIDGCVQLHGGYGYMTEYRVARDYMDNRIMTIFGGTTEIM 370 >gi|152986519|ref|YP_001348996.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961677|gb|ABR83702.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 384 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 34/251 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVE------GRV 253 LTE G+D A++ + + DG Y L+G K F++ +P + + ++A+ + G + Sbjct: 124 LTEPDSGSDAASLKTTA--LRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGI 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R G+P GL + K+G + T ++ F + L+G + G Sbjct: 182 SAFVVER----GTP-GLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVE-GIGFKT 235 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK+L D + ++ + V +AE A+ YA R G + + +++ +AD + Sbjct: 236 AMKVL---DKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + A DE + EA+ A++ A +M V A++ GG+GYI Sbjct: 293 AYAARCMVIDAARQRDEGRDVGTEASCAKLFA-------SEMCGRVADRAVQIFGGAGYI 345 Query: 426 EERSIARHYRE 436 + I R YR+ Sbjct: 346 GDYGIERFYRD 356 >gi|48478261|ref|YP_023967.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790] gi|48430909|gb|AAT43774.1| isovaleryl-CoA dehydrogenase [Picrophilus torridus DSM 9790] Length = 372 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 23/254 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 LG+TE GTD ++ ++ ++ DG Y ++G K F++ +P +D F+ A+ + FL+ Sbjct: 117 LGMTEPSAGTDALSMKTRADEM-DGKYRINGSKTFITNAPFADVFLTYARTGDDISAFLI 175 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL--- 315 S G + K+G R + T E+ F++ ++G + G ++ Sbjct: 176 L-----ASDAGFSRGKSFKKLGMRGSPTGEIYFND---IIIGSDRIIGGINHGKNVMFSG 227 Query: 316 IYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + ++ AI++ + + +S A+ Y+ R G + + +++ +A + + + Sbjct: 228 LNMERAILAFNSIGISRRAFDLAMEYSMEREQFGKPIHEFELIQEKLAYMYTKLETSRLF 287 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ + + + S +AA + + A T + + EA++ GG GYI++ I R Sbjct: 288 AYHALENVQKDRMNSLDAAASILYASETSEYIAR-------EALQIFGGYGYIKDFEIER 340 Query: 433 HYRESPANSILLGS 446 R+S SI G+ Sbjct: 341 LMRDSILLSIGAGT 354 >gi|237509924|ref|ZP_04522639.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei MSHR346] gi|235002129|gb|EEP51553.1| AMP-dependent synthetase and ligase [Burkholderia pseudomallei MSHR346] Length = 1291 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|297154172|gb|ADI03884.1| acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 387 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 28/261 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + LTE GG+D+ A+ + + +DG Y +SG K W +S S +L + G Sbjct: 124 MALTEPGGGSDLQAMRTVAHREADG-YVVSGSKTWITNSRRSQLIALLC----KTGPDAT 178 Query: 259 PR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPV 309 P LL + P GL R K+G + + EL F +LG + G Sbjct: 179 PAHQGISILLAEHGP-GLTVSRDLPKLGYKGVESCELSFDGYRAPADAVLGGVE-GKGFA 236 Query: 310 EDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + MK L L A ++ R + +A+ YA+ R G + + +AD+A + Sbjct: 237 QMMKGLETGRLQVAARALGVGRAAFEDALAYAQERESFGTPIWKHQSIGNYLADMATSLT 296 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA L+ A D + EA A++ A T A + A+ GG GY E Sbjct: 297 AARQLTLYAAREADAGRRVDMEAGMAKLFASET-------AMQIALNAVRIHGGYGYSTE 349 Query: 428 RSIARHYRESPANSILLGSGN 448 + R++R++P +++G G Sbjct: 350 FDVERYFRDAPL--MIVGEGT 368 >gi|169599849|ref|XP_001793347.1| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15] gi|160705334|gb|EAT89481.2| hypothetical protein SNOG_02750 [Phaeosphaeria nodorum SN15] Length = 416 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 21/252 (8%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ T++ G Y LSG K W +SP++D ++ A Sbjct: 145 MAKGELLGCFGLTEPNHGSDPGSMESTAKPHPTKKGYYSLSGSKTWITNSPIADVLLVWA 204 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 +++G++ F++ R + P L +K+K G R++ T ++ N + + N+ Sbjct: 205 KLDGKIRGFVIER--DQCPPGTLETPAIKDKNGLRASLTGMIQLDNC---PVPEANMFPE 259 Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361 V L+SA ++ G +L + I R R+ G + ++++ +AD Sbjct: 260 IVGLKGPFSCLNSARYGIAWGTMGALEDCISRTRQYALDRKQFKGNPIAKYQLVQKKLAD 319 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 D A + ++ DE K+ E M + K C A E GG Sbjct: 320 ATTDAAFGILAAVQVGRLKDEGKAAPE-------MISMIKRQNCDRALINARTLQEVFGG 372 Query: 422 SGYIEERSIARH 433 + +E I RH Sbjct: 373 NAVSDEYGIGRH 384 >gi|226362011|ref|YP_002779789.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226240496|dbj|BAH50844.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 390 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 35/306 (11%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + + PK+ + E T + LTE GG+D+ Sbjct: 93 MGGHTVVAKLLSLYGTQEQKQQYLPKMATGEIRAT-------------MALTEPGGGSDL 139 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLLEDGS 266 A+++ + D + W ++ S +L + + + G +V L+E G Sbjct: 140 QAMSTTAKADGDDLVISGSKTWISNARRSGLIALLCKTDPQASPKHRGISIV--LVEHGP 197 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 GL R K+G + T EL F N L G G + + A Sbjct: 198 --GLTVSRDLPKLGYKGVETCELSFDNYRIAASAILGGTPGKGFGQMMKGLETGRIQVAC 255 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 ++ +L +++ YA++R G + + +AD+A + AA L++ A +D Sbjct: 256 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQYDS 315 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 EA A++ A ++A + A+ GG GY E + R++R++P + Sbjct: 316 GDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL--M 366 Query: 443 LLGSGN 448 ++G G Sbjct: 367 IVGEGT 372 >gi|153009500|ref|YP_001370715.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561388|gb|ABS14886.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 394 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + LL +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDALLPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370 L+ A +S + AE + R++ D+P + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFDKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FD+ + E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDDGRMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|62290000|ref|YP_221793.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82699928|ref|YP_414502.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|189024241|ref|YP_001935009.1| glutaryl-CoA dehydrogenase [Brucella abortus S19] gi|237815509|ref|ZP_04594506.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|254689313|ref|ZP_05152567.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254693798|ref|ZP_05155626.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|254697447|ref|ZP_05159275.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254730344|ref|ZP_05188922.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256257560|ref|ZP_05463096.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260546555|ref|ZP_05822294.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260754828|ref|ZP_05867176.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758045|ref|ZP_05870393.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761871|ref|ZP_05874214.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883840|ref|ZP_05895454.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261214078|ref|ZP_05928359.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297248402|ref|ZP_06932120.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|62196132|gb|AAX74432.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82616029|emb|CAJ11065.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-te [Brucella melitensis biovar Abortus 2308] gi|189019813|gb|ACD72535.1| glutaryl-CoA dehydrogenase [Brucella abortus S19] gi|237788807|gb|EEP63018.1| Acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|260095605|gb|EEW79482.1| glutaryl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260668363|gb|EEX55303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672303|gb|EEX59124.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674936|gb|EEX61757.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873368|gb|EEX80437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915685|gb|EEX82546.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297175571|gb|EFH34918.1| glutaryl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 394 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|325280696|ref|YP_004253238.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] gi|324312505|gb|ADY33058.1| Butyryl-CoA dehydrogenase [Odoribacter splanchnicus DSM 20712] Length = 379 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD +A Q + +G Y L+G K F++ + + +I++A + G Sbjct: 123 FGLTEPNAGTDASA--QQTMAVKEGEHYVLNGSKIFITNAAYAHVYIVMAMTDKAQGTRG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 + + + G + + K+G R +AT EL F N ++ N+ E +I + Sbjct: 181 ISAFIVERDFPGFSIGKKEKKMGIRGSATCELIFENC---IVPKENLLGKVGEGFRIAMK 237 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD M ++ + +A E + Y + R G + + +AD+ I AA Sbjct: 238 TLDGGRMGIASQALGIAQGAMDETVKYVKERKQFGRSIGQFQNTQFQLADLQTRIQAARL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A D + S ++A A++ A T A V +A++ GG GY E + Sbjct: 298 LVRKAAWKKDMKQPYSADSAQAKLFAAET-------AMEVTTKAVQFHGGYGYTREYPVE 350 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 351 RMMRDAKITEIYEGT 365 >gi|297158876|gb|ADI08588.1| putative acyl-CoA dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 608 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 52/370 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTRAVRQEDGSWHIEGVKRFITSGEHDLSENIIHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + F+VP+ D G NG +++K+G R + T EL F G+LLG+ Sbjct: 224 KGLSLFIVPKYDFDWETGELGERNGAYTTNVEHKMGLRVSNTCELTFGADHPAKGWLLGE 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG------------ 347 + G + KI+ + + +++ + A+ YA+ R V G Sbjct: 284 KH--DGIRQMFKIIEFARMMVGTKAMATLSTGYLNALDYAKER-VQGPDLAAFTDKSAPR 340 Query: 348 -ILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSRSEEAAYA--RIMAPI 399 + P ++R++ +L A+ D EA AA+A ++ PI Sbjct: 341 VTITHHPDVRRSLMAQKAYAEGLRSLVLYTASVQDEIQALEAAGEDTSAAHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD-----V 454 K + + A +A++++ IGGSGY++E + ++ R++ +++ G+ D + Sbjct: 401 VKGYGSEKAYEQLAQSLQTIGGSGYLQEYPLEQYIRDAKIDTLYEGTTAVQGQDYFFRKI 460 Query: 455 LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL-ARFLTEKIALASS 513 + + N+ + + G G+++ + +GL LT+ A Sbjct: 461 VRDQGQALNVISEEIKKFLAEAG-GGEELTAARDALAKAAADLEGLVGTMLTDLAATQQD 519 Query: 514 AAALYRAGMN 523 A +Y+ G+N Sbjct: 520 VATIYKVGLN 529 >gi|260777481|ref|ZP_05886375.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] gi|260607147|gb|EEX33421.1| isovaleryl-CoA dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] Length = 367 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 40/283 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E G+D+ ++ + + +S Y L+G K W + P +D ++ A+ + + Sbjct: 108 LAMSEPNAGSDVVSMQLKAE-LSGDHYVLNGTKMWITNGPDADVLVVYAKTDPSAASRGI 166 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F++ R E G + + +K+G R + T EL F+N +LG++N + Sbjct: 167 TAFIIERDFE-----GFSHAQKLDKLGMRGSNTCELVFNNCKVPVENVLGEVN------Q 215 Query: 311 DMKILIY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +K+L+ LD ++ +G M+ L + Y R G + + +++ +AD+ Sbjct: 216 GVKVLMSGLDYERVVLAAGPLGIMQACLDLVVPYVHDRKQFGQSIGEFQLVQAKVADMYT 275 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 AA A + +A + D ++ ++AA A + + ++A + +A++ +GG+GY Sbjct: 276 RANAARAYVYTVAAACDRGETTRKDAAGAIL-------YSAELATQLALDAIQLLGGNGY 328 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 I E R R++ I G+G + + +L G LFE+ Sbjct: 329 INEFPAGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 365 >gi|119872929|ref|YP_930936.1| butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184] gi|119674337|gb|ABL88593.1| Butyryl-CoA dehydrogenase [Pyrobaculum islandicum DSM 4184] Length = 410 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 21/274 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K +TE G+D+A I ++ +K+ + + ++G K F+SS ++D FI+LA+ Sbjct: 122 PIAKGEKFGAFAVTEPCCGSDVAGIQTRAEKVGNK-WVINGRKAFISSSDIADYFIVLAR 180 Query: 249 V----EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN- 303 + ++ + + + G ++ +K+G + EL F N + D N Sbjct: 181 TYPPPDKKLRYLGLTFFIVERDTPGFKVEQCYHKMGLHGDHACELVFENV---EVPDENR 237 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRA 358 V + + + D + V+ V +A+ A Y +R G + ++ + Sbjct: 238 VGEEGMGFLYAMETFDRTRIGVAAQAVGMAQGAFEKAFQYVHQRQAFGVPIAYFQAIQFS 297 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + ++ I A L++ A DE +R E +A + K++ ++A VI+EA+ Sbjct: 298 LVEMMAKIFTARLLTYLAAKLADE--NRKE----FTFVASLAKFYATEVAEEVISEAINL 351 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 GG G I E + R R+ I G+ N L Sbjct: 352 HGGVGVIRETGVERFLRDVKITQIYEGANNIQKL 385 >gi|146307993|ref|YP_001188458.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145576194|gb|ABP85726.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 379 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 21/261 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGR---- 252 + + +TE G+D+A + + D + L+G K F+S+ ++D I+ A+ + Sbjct: 122 LAVAMTEPSAGSDLAGMRTTAVDKGDH-WLLNGSKVFISNGYLADLVIVAAKTDPANKHA 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 +G FLV R + G G ++LK K+G S T EL F++ LLGD + Sbjct: 181 MGLFLVERGMA-GFERG---KKLK-KLGMHSQDTAELFFNDVKVPKENLLGDAKGGFFYL 235 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +M L +A +V+G +L I Y R R G + + +A++ I A Sbjct: 236 MNMLAQERLTNACGAVAGAEAALQTTIDYVRERQAFGRPVAHFQNTRFKLAEMRTQIDVA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R ++ K E AA A++ T CK V+ E ++ GG GY+ E Sbjct: 296 QVFTDRCVLDHNQKKLTPEVAAEAKL---FTTELLCK----VVDEGVQLHGGWGYMWEYP 348 Query: 430 IARHYRESPANSILLGSGNAM 450 I + Y + I G+ M Sbjct: 349 ICKMYANARIQRIFAGTSEIM 369 >gi|76818257|ref|YP_337190.1| polyketide synthase [Burkholderia pseudomallei 1710b] gi|76582730|gb|ABA52204.1| polyketide synthase [Burkholderia pseudomallei 1710b] Length = 1276 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 740 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 797 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 798 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 856 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 857 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 915 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 916 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 969 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 970 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1002 >gi|71280784|ref|YP_268345.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H] gi|71146524|gb|AAZ26997.1| isovaleryl-CoA dehydrogenase [Colwellia psychrerythraea 34H] Length = 389 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G+K W + P +D F++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLRADKKGDK-YILNGNKMWITNGPDADVFVIYAKTDTSAGSKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + N+ + +++L+ Sbjct: 189 TAFIVERDYPGFSRHQKLDKLGMRGSNTCELVFQDC---EVPAENILGAEGKGVRVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG + + +A + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGSLGIMDACMDLVVPYIHDRKQFGQSIGEFQLVQGKVADMYTQMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ +A + D ++ +++A A I+ + ++A + + ++ +GG+GYI E R Sbjct: 306 AYMVAQACDRGETTRKDSA-AVIL------YAAELATKMALDTIQLLGGNGYINEFPAGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|167913884|ref|ZP_02500975.1| non-ribosomal peptide synthetase [Burkholderia pseudomallei 112] gi|254198940|ref|ZP_04905358.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|169657112|gb|EDS88506.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] Length = 1295 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 989 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021 >gi|306845810|ref|ZP_07478378.1| acyl-CoA dehydrogenase [Brucella sp. BO1] gi|306273702|gb|EFM55540.1| acyl-CoA dehydrogenase [Brucella sp. BO1] Length = 375 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|169795335|ref|YP_001713128.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii AYE] gi|184158797|ref|YP_001847136.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213158679|ref|YP_002319977.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215482869|ref|YP_002325072.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|239502893|ref|ZP_04662203.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB900] gi|260554448|ref|ZP_05826669.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|169148262|emb|CAM86127.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii AYE] gi|183210391|gb|ACC57789.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213057839|gb|ACJ42741.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213987579|gb|ACJ57878.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|260410990|gb|EEX04287.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|322507390|gb|ADX02844.1| Putative acyl coenzyme A dehydrogenase [Acinetobacter baumannii 1656-2] gi|323518712|gb|ADX93093.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] Length = 381 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTHLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + RH G + + +A +D A TA R Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|120611270|ref|YP_970948.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589734|gb|ABM33174.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 388 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 29/274 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQV------EGRVG 254 LTE G+D A++ ++ + + + Y ++G K F+S S D +++A+ G + Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYVINGAKAFISGAGSTDVLVLMARTGSPDSGAGGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP G+ Y + + K+G S T + F + + D + G E KI Sbjct: 183 AFAVP-----ADAAGIQYGKKEEKMGWNSQPTRTISFDSVR--IPADHLLGAGG-EGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +L A Y + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALNAAQQYMQDRKQFGKAIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + RLA S +A +R A + K + V+ EA++ GG GYI E Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFATDAGFDVVNEALQLHGGYGYIREY 348 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461 + R R++ + IL G+ M V+ +L+ G Sbjct: 349 PLERLLRDARVHQILEGTNEIMRVIIARRMLDGG 382 >gi|254296707|ref|ZP_04964161.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|157806688|gb|EDO83858.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] Length = 1291 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|302343377|ref|YP_003807906.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301639990|gb|ADK85312.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 383 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFL 257 G GLTE G+D A ++ + DG + ++G K F+++ + A + + V R G F Sbjct: 122 GFGLTEPNAGSD--AGGARTTAVLDGDSWLINGSKIFITNASTPASLGVT-VMARTGVFP 178 Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R L+E+G+P G + + K+ R++ T EL F + L Sbjct: 179 DGRPELSCILVENGTP-GFEARPMHGKMMWRASNTSELYFEDCRVPATNILGQRGKGFHQ 237 Query: 312 MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M L LD+ +S+ M V A+ A+ YA++R G + V +AD+A++I Sbjct: 238 M--LATLDAGRLSIGAMGVGGAQGAYELALKYAKQREQFGRPIAAFQVNAFKLADMAMEI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L ++ D +S S+ AA A++ + ++ V EA++ GG G + Sbjct: 296 EAARLLLYKACWQKDNHQSFSKLAAMAKL-------YASEVMGRVATEAVQLHGGYGLMR 348 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 E + R +R+ +I G+ L + L+ Sbjct: 349 EYDVERFFRDQKLLTIGEGTSEVQRLVIARLI 380 >gi|284164461|ref|YP_003402740.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] gi|284014116|gb|ADB60067.1| acyl-CoA dehydrogenase domain protein [Haloterrigena turkmenica DSM 5511] Length = 381 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 23/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 L+E G+D+ A+ + +K D G W + ++D + A+ + G F Sbjct: 125 LSEAGAGSDVPAMDTVAEKEGDEYVINGGKLWISNGSVADTVTLFAKTDPDAGNKGITSF 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 +V R ED +G + ++K+G++ T EL F LG+ G V +K Sbjct: 185 IV-RPEED---DGFIVEGTEDKLGDKGCPTAELRFDEMRIPESRRLGE--EGEGFVHALK 238 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L + A V R + EA YA R G + + +K +AD+ I AA Sbjct: 239 TLNGGRITIAARGVGIARAAFEEARDYANEREQFGQPIGEFQSIKHKLADMDTKIQAAKM 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A+ ++ ++A+ A++ + +++ V E ++ GG GY ++ + Sbjct: 299 LMHKAADKKIRGENYIKDASQAKL-------YASEVSREVANEGIQIHGGYGYTKDFAAQ 351 Query: 432 RHYRESPANSILLGS 446 R YR++ N I G+ Sbjct: 352 RFYRDAKLNEIYEGT 366 >gi|209571446|ref|NP_001129356.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori] gi|208609173|dbj|BAG72196.1| isovaleryl coenzyme A dehydrogenase [Bombyx mori] gi|209172195|dbj|BAG74561.1| isovaleryl Coenzyme A dehydrogenase [Bombyx mori] Length = 416 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 18/263 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + Sbjct: 155 LAMSEPGSGSDVVSMKLRAEKKGD-YYVLNGNKFWITNGPDADVLVVYAKTNWSTSKQQH 213 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + L+E P Q+L +K+G R + T EL F + LLG N + Sbjct: 214 GISAFLIEKDYPGFSTAQKL-DKLGMRGSNTGELVFEDCKVPAANLLGQENKGVYVLMSG 272 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L A V M+ ++ A YA R G + + +++ +AD+ ++A + Sbjct: 273 LDLERLVLAAGPVGLMQAAIDTAFLYAHTRKQFGKNIGEFQLIQGKMADMYTTLSACRSY 332 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D S++ A + +C + A V +A++ +GG+GYI + R Sbjct: 333 LYNVAKACDNGHVNSKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYPTGR 385 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 R++ I G+G + V +L Sbjct: 386 ILRDAKLYEI--GAGTSEVRRML 406 >gi|297154353|gb|ADI04065.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces bingchenggensis BCW-1] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 ++E G+D+ A++++ DG + +SG K W + ++D + + + G + CF Sbjct: 128 MSEPEAGSDLGAMSTKAVA-EDGHHVISGTKAWVSHAGVADVYNVYCRTGGSALSGLSCF 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LV D GL + K+G RS T ++ F G + D + M + Sbjct: 187 LV-----DADSEGLRPLAHERKMGVRSLPTAQIAFD---GVRVPDQRMIGRRNRGMLVAA 238 Query: 317 YL-DSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ D + +S V LA+A + R G +I + +AD+A IAAA Sbjct: 239 HVFDHGRLGISACAVGLAQAALDHAAAYAKERTQFGKPIISFQGLSFLLADMATQIAAAR 298 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL + +A D+ K S EAA ++ A T A V +A++ +GG GY ++ + Sbjct: 299 ALLYSVAALKDQGKPISAEAAKCKLFATDT-------AMRVTTDAVQVLGGYGYTQDFPV 351 Query: 431 ARHYRESPANSILLGS 446 R RE+ IL G+ Sbjct: 352 ERWMREAKLLQILEGT 367 >gi|294853739|ref|ZP_06794411.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] gi|294819394|gb|EFG36394.1| acyl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] Length = 375 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|291226346|ref|XP_002733155.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase-like [Saccoglossus kowalevskii] Length = 433 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 25/229 (10%) Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 Y L+G K W + P++D F++ A+ + G+ + ++E P G +K+G R Sbjct: 204 YVLNGSKFWITNGPIADVFVVYAKTDLSGQPQHGISTFIIERDFP-GFSTGPKLDKLGMR 262 Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMK--ILIYLDSAIMSVSGMRVSLAEAIH 337 + T EL F N +LG N T D++ IL+ L M+ +L A Sbjct: 263 GSPTGELIFENCKVPVENMLGGYNKGTNNDTDIQSNILVPL---------MQAALDVAFP 313 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y R G + +M+ +AD+ ++A + + +A + DE +++ A + Sbjct: 314 YLHARKAFGKPIGTYQLMQGKMADMYTRLSACRSYVYGVARACDEGHFNNKDCAGVIL-- 371 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V +A++C+GG+GYI E + R R++ I G+ Sbjct: 372 -----YSAENATQVALDAIQCLGGNGYINEYATGRLLRDAKLYEIGAGT 415 >gi|221209486|ref|ZP_03582467.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1] gi|221170174|gb|EEE02640.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD1] Length = 377 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + M+ F M G+ G Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGMAIVFAMTDPDAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G + + K+G R++ T + N LLG+ L ++ Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G L + +++ +AD+A+ I A Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A K + +MA V ++A++ GG GY+ + Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 EVERHYRDARITQIYEGT 365 >gi|167773029|ref|ZP_02445082.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM 17241] gi|167664962|gb|EDS09092.1| hypothetical protein ANACOL_04418 [Anaerotruncus colihominis DSM 17241] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 20/265 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 PM + + GLTE GTD A Q + + +G Y L+G K F+++ +D +I+ A Sbjct: 113 PMAQGKLLGAFGLTEPNAGTD--ASGQQTKAVLEGDHYVLNGSKIFITNGGKADIYIIFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + + + G + + K+G R ++T EL F N ++ N+ Sbjct: 171 MTDKSKGVKGISAFIVEKDFPGFSIGKKELKMGIRGSSTCELIFENC---IVPKENLLGQ 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 + I + LD + ++ + +A E + Y + R G + + +AD Sbjct: 228 EGKGFTIAMTTLDGGRVGIAAQALGIAQGAFDETVKYVKERKQFGRPISAFQNTQFQLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + I AA L + A + D K S +AA A++ A ++A V + ++ GG Sbjct: 288 LKTKIEAARLLVYSAAVAKDTKKRFSTDAAMAKLFA-------AEVAMEVTTKCVQLFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY + + R R++ I G+ Sbjct: 341 YGYTRDYPVERMMRDAKITEIYEGT 365 >gi|229106283|ref|ZP_04236780.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-28] gi|228677138|gb|EEL31518.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-28] Length = 382 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 39/244 (15%) Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262 RGG QG+K + ++G K F + +P+ D FI+ A +EGR VG F++PR Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315 + G+ + + + R A+ +L E N F NV G V+ I L Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLKNVEIENRFF-----TNVLGGKVKQKGIGWL 240 Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +++ + + ++ V AE+ H S +L P ++R + +I L++ A Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PSVRRLVGEIELELMQARV 296 Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +++A +DEA+ + S +A A + KY A +++ +AM +G E+ + Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPL 351 Query: 431 ARHY 434 R+Y Sbjct: 352 HRYY 355 >gi|224825721|ref|ZP_03698825.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224601945|gb|EEG08124.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 25/259 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + +D ++ A+ + G + Sbjct: 127 LAMSEPNAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGGDADTLVVYAKTDVNAGPKGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDMK 313 + + G + +K+G R SNT+ D V + E +K Sbjct: 186 TAFIVEKGFKGFTHGSKLDKLGMRG--------SNTYPIFFDDCEVPAENILGKEGEGVK 237 Query: 314 ILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ + A+++ M+ + + Y R G + D +M+ +AD+ + ++ Sbjct: 238 VLMSGLDFERAVLAAGPLGIMQACMDVVVPYLNDRQQFGQAIGDFQLMQGKLADMYVKLS 297 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ A + + + D R E R A + + A + +A++C+GG+GYI E Sbjct: 298 ASRAYVYAVGQALD----RGESGRQTRKDAAGAILYAAENATQMALDAIQCLGGNGYINE 353 Query: 428 RSIARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 354 YPTGRLLRDAKLYEIGAGT 372 >gi|126732009|ref|ZP_01747812.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37] gi|126707541|gb|EBA06604.1| Acyl-CoA dehydrogenase [Sagittula stellata E-37] Length = 377 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 39/326 (11%) Query: 135 IRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKT 194 I AAR L + GH + + + ++A T + + W PK+ + E Sbjct: 73 IEAARANLASW---GHGIHSGIVAHYILAYGTEEQKAR-WLPKMVTGE------------ 116 Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ----V 249 + L +TE GG+D+ + ++ + DG +Y LSG K F+++ I++A Sbjct: 117 -LVGALAMTEPSGGSDVQNLKTRA--VRDGNVYRLSGQKTFITNGQHANLIVVAAKTDPS 173 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 +G G L+ ++E G R KIG + T EL F + LLG Sbjct: 174 QGSKGTSLM--VVETDGAAGFTRGRNLEKIGCHAADTSELFFDDVALPPENLLGG-EEGQ 230 Query: 307 GPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G + MK L L +V M+ ++ + Y + R GG L + +A+ A Sbjct: 231 GFYQMMKQLPQERLIIGCGAVGAMKGAMERTVRYCKEREAFGGPLTQFQNTRFKLAECAT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A A D + A + KYW V+ E ++ GG GY Sbjct: 291 KTSVARAF-------LDACMADHLNGTLTVEKAAMAKYWLSDTQGEVLDECLQLHGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 ++E ++A + ++ I G+ M Sbjct: 344 MQEYAVAEMWTDARVQRIYGGTNEIM 369 >gi|260907092|ref|ZP_05915414.1| acyl-CoA dehydrogenase domain-containing protein [Brevibacterium linens BL2] Length = 388 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + ++ D Y L+G K F+S + S+ ++++A+ G+ G + Sbjct: 132 LTEPNAGSDAAALRTSAREDGDS-YVLNGVKQFISGAGTSETYLVMAR-SGQDGSRGISA 189 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI---- 316 + + GL + + K+G R+ T ++ N + N+ P + KI + Sbjct: 190 FILEKGMEGLSFGPNEQKMGWRAQPTRQVIMENV---RVPKENLLGEPGQGFKIAMSGLD 246 Query: 317 --YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L+ S+ G + +L +AI Y R G L ++ +A++ + AA +L + Sbjct: 247 GGRLNIGACSLGGGQSALEKAIDYMGERQAFGTELSAFQALRFEVAEMQTKLEAARSLLW 306 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A+++D + +++ + K V A++ GG GY+ E I + Sbjct: 307 RAASAYDSGDPNTS------LLSAMAKLTATDSGFDVANRALQLHGGYGYLTEYGIEKLV 360 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 361 RDLRVHQILEGTNEIM 376 >gi|83593170|ref|YP_426922.1| butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] gi|83576084|gb|ABC22635.1| Butyryl-CoA dehydrogenase [Rhodospirillum rubrum ATCC 11170] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + DG Y LSG K F+S SD ++++A+ G G + Sbjct: 124 LTEPGAGSDAAALRTRAVRDGDG-YRLSGQKAFISGGGHSDVYVVMART-GEAGAKGISA 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314 + + GL + + + K+G +S T + F DL V E +I Sbjct: 182 FVVEAGAPGLSFGKPEAKMGWKSQPTCAVMFD--------DLRVPASHRLGEEGEGFRIA 233 Query: 315 LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ LD + S+ G + + A+ Y + R G + + + +AD+A + AA Sbjct: 234 MMGLDGGRLNIGACSLGGAKGAFEAALAYVKERRQFGKAIAEFQATQFTLADMATALEAA 293 Query: 370 TALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L + A D S + A A+ +A T + C +A++ GG GY + Sbjct: 294 RLLLHKAAWLLDAGDPSATSFCAMAKRLATDTGFSVCD-------QALQLHGGYGYTSDY 346 Query: 429 SIARHYRESPANSILLGSGNAM 450 + R R+ + IL G+ M Sbjct: 347 PVERLLRDLRVHRILEGTNEIM 368 >gi|332291488|ref|YP_004430097.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169574|gb|AEE18829.1| acyl-CoA dehydrogenase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 392 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 39/249 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + + + + + D Y L+G K W +SP D ++ A+ EGR+ + Sbjct: 136 FGLTEPDHGSNPSGMVTNFKDMGDH-YLLNGAKLWISNSPFCDVAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 V R +E G NK R++AT EL F D+ V P E++ Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFQ--------DVKV---PKENLLPNKS 238 Query: 313 ---KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 L LDSA ++ + A A+ YA+ R G + + ++ +A++ Sbjct: 239 GLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKERIQFGKPIAAFQLQQKKLAEMIT 298 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A L+ RL +E ++ S + + A K +MA + EA + +GG G Sbjct: 299 EITKAQLLALRLGQLKNEDRATSAQISMA-------KRNNVEMALKIAREARQILGGMGI 351 Query: 425 IEERSIARH 433 E SI RH Sbjct: 352 TGEYSIMRH 360 >gi|305677907|pdb|3OIB|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase From Mycobacterium Smegmatis, Iodide Soak gi|305677908|pdb|3OIB|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase From Mycobacterium Smegmatis, Iodide Soak gi|309320750|pdb|3P4T|A Chain A, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase From Mycobacterium Smegmatis gi|309320751|pdb|3P4T|B Chain B, Crystal Structure Of A Putative Acyl-Coa Dehydrogenase From Mycobacterium Smegmatis Length = 403 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + ++ D Y ++G K +++S + +++ A G G V Sbjct: 145 LAITEPGGGSDVGHLRTRADLDGD-HYVINGAKTYITSGVRADYVVTAARTGGPGAGGVS 203 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 ++ D G R +K+G RS+ T EL +++ L+G N + + Sbjct: 204 LIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAE 263 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + A + +G + L + + R R G LI + ++ +A +A I A + + Sbjct: 264 RVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHV 323 Query: 377 ANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 ++ E +A+ A W V +A++ GG GY+ E + R YR Sbjct: 324 VERQLAGETNLIAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQYR 376 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 377 D--MRILGIGGGTTEILTSL 394 >gi|134282938|ref|ZP_01769640.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|134245586|gb|EBA45678.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] Length = 1293 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 989 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021 >gi|226196451|ref|ZP_03792032.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|225931327|gb|EEH27333.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] Length = 1293 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 759 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 816 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 817 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQTMNFAR 875 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 876 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 934 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 935 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 988 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 989 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1021 >gi|161619036|ref|YP_001592923.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|260566377|ref|ZP_05836847.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|161335847|gb|ABX62152.1| Acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|260155895|gb|EEW90975.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] Length = 394 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|149277315|ref|ZP_01883457.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase) [Pedobacter sp. BAL39] gi|149232192|gb|EDM37569.1| bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase) [Pedobacter sp. BAL39] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 44/265 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRVGC 255 L+E G+D + + + D Y L+G K W + + ++++AQ + + Sbjct: 125 LSEPEAGSDATSQQTTAEDKGDH-YLLNGTKNWITNGSTASTYLVIAQTDRSLKHKGINA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--K 313 F+V + +E G +NK+G R S+T + D+ V P E+ + Sbjct: 184 FIVEKGME-----GFTIGPKENKMGIRG--------SDTHSLMFNDVKV---PKENRIGE 227 Query: 314 ILIYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIAD 361 A+ ++ G R+ +A A+ YAR+R G + + + +AD Sbjct: 228 EGFGFKFAMKTLEGGRIGIAAQALGIAAGAYELALDYARQRKSFGKPIAEHQAVAFKLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A I AA L ++ A D+ K + + + K + K+A V EA++ GG Sbjct: 288 MATQIEAARMLVYKAAWLKDQGKPYT-------LAGSMAKLYASKVAMEVTTEAVQVHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 G+++E + R R++ I G+ Sbjct: 341 YGFVKEYHVERLMRDAKITQIYEGT 365 >gi|118469346|ref|YP_888975.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118170633|gb|ABK71529.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 387 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 72/284 (25%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA--FIML 246 P+ + A+G GLTE GG+D A T ++ DG + ++G K F+++ +D + + Sbjct: 117 PLLASGKALGAFGLTEAGGGSDAGA-TKTTARLDDGHWVINGSKQFITNSGTDITRLVTV 175 Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 V G + LVP E G + NK+G ++ T L F Sbjct: 176 TAVTGEKPDGRKEISSILVPVPTE-----GFTAEPAYNKVGWNASDTHPLSFD------- 223 Query: 300 GDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVS 345 D+ V P E++ L LD ++++ + V A E++ YA+ R Sbjct: 224 -DVRV---PEENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKERQAF 279 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY---ARIM------ 396 G I A++F++A EA++ + AY A +M Sbjct: 280 GAA-----------------IGTYQAIAFKIARM--EARAHAARTAYYDAAALMLAGKPF 320 Query: 397 ---APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 A + K + A +A + GG G++ E S+ARHYR+S Sbjct: 321 KKAASVAKLVASEAAMDNARDATQIFGGYGFMNEYSVARHYRDS 364 >gi|33595664|ref|NP_883307.1| acyl-CoA dehydrogenase [Bordetella parapertussis 12822] gi|33565743|emb|CAE36287.1| probable acyl-CoA dehydrogenase [Bordetella parapertussis] Length = 377 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 33/276 (11%) Query: 185 PTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAF 243 P + + A+ L+E+ G+D A+ + ++ G + + G K W + S F Sbjct: 100 PVLLGGLAREGRAVNFALSERGAGSDAGAVQATAEREGAG-WRIRGEKCWLGNGGHSHHF 158 Query: 244 IMLAQV--EGR---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG-- 296 I+ A+ EG+ + F+V R +G+ ++K+G R T L+ Sbjct: 159 IVFARTGPEGQRNNISAFVVAR-----EADGVVVDFYEDKMGIRGTTTTNLKLDTWVAED 213 Query: 297 FLLGDLNVSTGPVEDMKI---LIYLDSAIMSVSGMRVSL---AEAIHYARRRHVSGGILI 350 L+G+L +K+ + + +++ ++L AEA +A R G +I Sbjct: 214 ALVGELG------HGLKLALATLTIGRVVVAAQANGIALCAYAEACDFAVSRETFGRSII 267 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 D + +AD ++++ + + A ++D + S A A+++A +++ Sbjct: 268 DHQGIGFKLADAMTGLSSSRMMVYEAARAYDAGEDISTLGAMAKLLAS-------EVSHT 320 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V+ +AM+ +GG GY++ + R YR+ I G+ Sbjct: 321 VVDDAMQVLGGRGYVKPSAAERCYRDQRITEIYEGT 356 >gi|146278050|ref|YP_001168209.1| acyl-CoA dehydrogenase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145556291|gb|ABP70904.1| isovaleryl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC 17025] Length = 385 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/304 (20%), Positives = 137/304 (45%), Gaps = 35/304 (11%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 + + L +P + P++ S E+ +G L ++E G+D+ ++ + Sbjct: 101 NQIRLNGSPEQQARYLPRLVSGEH--------------VGALAMSEAGAGSDVVSMKLKA 146 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +K +G Y L+G K W + P +D ++ A+ + G + L + S G + Sbjct: 147 EK-RNGYYVLNGTKYWITNGPDADVLVVYAKTDPEAGAKGITAFLIEKSMKGFSTSPHFD 205 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVS----- 331 K+G R + T EL F + + NV + +++L+ LD + +SG+ Sbjct: 206 KVGMRGSNTGELIFEDC---EVPFENVLGAEGKGVRVLMSGLDYERVVLSGIGTGILSAC 262 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L E + Y + R G + +M+ +AD+ + + A A + +A + D + +AA Sbjct: 263 LDEVVPYCQSRQQFGQPIGSFQLMQGKLADMYVALNTARAYVYEVARACDAGRVTRADAA 322 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + + A +A++ +GG+G++ + ++R +R+ A + +G+G + + Sbjct: 323 GCVL-------YASEQAMVQAHQAVQALGGAGFLNDSVVSRLFRD--AKLMEIGAGTSEI 373 Query: 452 LDVL 455 +L Sbjct: 374 RRML 377 >gi|325093887|gb|EGC47197.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H88] Length = 447 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 46/299 (15%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 155 NGSPEQKAKFLPGLISGQKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITN 213 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ + G + + + + G R +K+G R + T EL F + F Sbjct: 214 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 273 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG LN +K+L+ L+ ++S M+ +L + Y R G Sbjct: 274 PQENMLGALN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGT 327 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----------RSEEAAYARIM 396 + +++ +AD+ ++A+ A ++ A DEA + R+++ A A + Sbjct: 328 PIAHNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEANNSAIRTQDCAGAILY 387 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A C +A++ +GG+GYI E R R++ I G+G + + +L Sbjct: 388 AAERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 437 >gi|159044299|ref|YP_001533093.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157912059|gb|ABV93492.1| acyl-CoA dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 381 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 24/259 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ ++ ++G Y L+G K F+S SDA+I++A+ G G + Sbjct: 124 LTEPGSGSDAAALKTRAERTNEG-YRLTGTKAFISGGGYSDAYIVMART-GEDGPRGISS 181 Query: 261 LL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ EDG+P GL + L++K+G R+ T +++ + LLG+ ++ Sbjct: 182 LIVEDGAP-GLSFGGLEDKMGWRAQPTRQVQLDDCAVPAANLLGEEGAGF-----RYAMM 235 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD ++++ + A+A + Y R G + ++ +AD +++ AA Sbjct: 236 GLDGGRLNIAACSLGAAQAALDATVAYMGERRAFGKPIDQFQALQFRLADAEIELQAARV 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D+ A A + K + + V + ++ GG GY+ + I Sbjct: 296 FLRQAAWKLDQG------APDATTHCAMAKKFVTEAGSRVADQCLQLHGGYGYLADYGIE 349 Query: 432 RHYRESPANSILLGSGNAM 450 + R+ + IL G+ M Sbjct: 350 KLVRDLRVHQILEGTNEIM 368 >gi|325520839|gb|EGC99836.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. TJI49] Length = 377 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F + G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAITDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G + + K+G R++ T + F N LLG+ L ++ Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITFENCAIPEENLLGNRGEGLKIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G L + +++ +AD+A+ I A Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 EVERHYRDARITQIYEGT 365 >gi|226308613|ref|YP_002768573.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187730|dbj|BAH35834.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 16/262 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE G+DIA++ + ++ DG + LSG K ++S+ +D ++ A+ + G Sbjct: 126 GFALTEPDAGSDIASMRTVARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 184 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP+ G+P G+ Y ++K+G RS T + + L D + T Sbjct: 185 ITAFVVPK----GTP-GISYSEPQDKMGIRSAPTYTVYLDDV--VLPLDSVIGTEGRGGN 237 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L+ A + V+ M +A R + + P+ + L A + Sbjct: 238 IALTALNRARIDVAAMANGIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLV 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R+ + D A ++ R A I+KY + +++ + ++ GG+G++ E I R Sbjct: 298 ASRV--TADWAADVKDDGQDIRRAASISKYVATEACFSIVDQTVQIHGGAGFMRESEIER 355 Query: 433 HYRESPANSILLGSGNAMVLDV 454 YR+ I G+ +L + Sbjct: 356 LYRDCRILRIFEGTSQIQLLTI 377 >gi|197103854|ref|YP_002129231.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] gi|196477274|gb|ACG76802.1| long-chain acyl-CoA dehydrogenase [Phenylobacterium zucineum HLK1] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 39/290 (13%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PK+ S E + +TE G+D+ + + +K D Y ++G Sbjct: 111 RQWLPKMVSGE-------------AITAIAMTEPGTGSDLQGVRTTARKDGDH-YVVNGS 156 Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K ++++ +D I++A+ + G + +L + + G R +KIG S T EL Sbjct: 157 KTYITNGQNADLIIVVAKTDPNAGSKGISLILVEATREGFKRGRNLDKIGQNSADTSELF 216 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDS---------AIMSVSGMRVSLAEAIHYARR 341 F + L L E+ K +YL S A+ +G + + EA + + Sbjct: 217 FEDVRVPLANCLG------EEGKGFVYLMSQLPQERLGIAVSGQAGAQRAFDEAAKFTKE 270 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + + + +A + + A A L + +A E K + EA+ A++ Sbjct: 271 RRAFGQAVFEFQNTRFTMAGLKAKLQAGWAHLDWCIARHL-EGKLTAAEASAAKLFHTEL 329 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ C A++ GG+GY+ E IAR +R++ I G+ M Sbjct: 330 QWEVCDA-------ALQLHGGAGYMNEYPIARLWRDARVQRIYGGTSEIM 372 >gi|220914672|ref|YP_002489980.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] gi|219952423|gb|ACL62813.1| acyl-CoA dehydrogenase domain protein [Methylobacterium nodulans ORS 2060] Length = 362 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 26/277 (9%) Query: 182 EYDPTNKAPMQKT----SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL-S 236 + DP P+ +T I L LTE + G+D+AA+ ++ + ++DG + ++G K F+ + Sbjct: 93 QADPDWAGPVIRTVQSGERTIALALTEPQAGSDLAALRARAEPVADG-WTITGEKRFICN 151 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 +D ++ A E +G FLV R GL + L G R L F+ Sbjct: 152 GTRADCLVVGAVTEAGLGLFLVER-----PQPGLTAEPLAAA-GWRCLPLAALRFAGVPA 205 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 L+ + + ++ L+ A+M+++ A+H+AR R V G L ++ Sbjct: 206 RLVVAPDRAARVLQRALAQERLNLAVMALASAECVRDAALHHARTRMVRGASLDAMSHIR 265 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +A+IA IA LA F ++ + + EA +RI A+ Sbjct: 266 QRLAEIATRIA--------LARCFVDSTAATAEA--SRIAMAKNAA--VAALEEAARTAV 313 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 + +G +G + + R R++P I +G G V++ Sbjct: 314 QILGAAGCVAPSVVERTQRDAPL--IAIGGGTTEVMN 348 >gi|218779944|ref|YP_002431262.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761328|gb|ACL03794.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 386 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/317 (20%), Positives = 137/317 (43%), Gaps = 30/317 (9%) Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 A + +V A +++L T K P + S + +++ + +TE + Sbjct: 85 AAPVFESNVGPARVISLFGTEEQKKAVIPGVCSGD-------------LSVSVCMTEPQA 131 Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGS 266 G+D+ ++ + ++ DG Y L+G K F++ M+ +++ + EG G + +L + Sbjct: 132 GSDLTSLDTNVEE-KDGHYVLNGTKVFITGGGMASHYLVYTRFEGIKGHKGIGAVLVESG 190 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD-----SA 321 G + + + +G R + L F N + NV + K+++ D +A Sbjct: 191 AEGFTFGKQEVFLGLRGMPSCALYFDNV---KIPKENVVIKAGDFGKLMLAFDIERCGNA 247 Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 M + + EA YA R G + + ++ AD+A+ + AA L +R A+ Sbjct: 248 AMCLGTAGGAFEEARRYAMERQAFGRPICEFQGLQFTFADMAMKLDAARLLVYRAASGAG 307 Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + EA+ + K + +M V A++ +GG GY + + R R++ A Sbjct: 308 QGLPSIYEAS-------MGKCYANEMVKEVTDAALQILGGYGYSTDYPLERMVRDARAWQ 360 Query: 442 ILLGSGNAMVLDVLNLL 458 + GS + + + ++L Sbjct: 361 VAGGSLQMLRVTIASVL 377 >gi|62317682|ref|YP_223535.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|83269665|ref|YP_418956.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|189022933|ref|YP_001932674.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|237817228|ref|ZP_04596220.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|254691180|ref|ZP_05154434.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254695516|ref|ZP_05157344.1| acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|254698963|ref|ZP_05160791.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254699703|ref|ZP_05161531.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|254732411|ref|ZP_05190989.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256015230|ref|YP_003105239.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] gi|256256366|ref|ZP_05461902.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260544917|ref|ZP_05820738.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260756781|ref|ZP_05869129.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260760212|ref|ZP_05872560.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260763450|ref|ZP_05875782.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882598|ref|ZP_05894212.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261215906|ref|ZP_05930187.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261750168|ref|ZP_05993877.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|297249726|ref|ZP_06933427.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|62197875|gb|AAX76174.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82939939|emb|CAJ12957.1| Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-te [Brucella melitensis biovar Abortus 2308] gi|189021507|gb|ACD74228.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|237788041|gb|EEP62257.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|255997890|gb|ACU49577.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] gi|260098188|gb|EEW82062.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260670530|gb|EEX57470.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260673871|gb|EEX60692.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676889|gb|EEX63710.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260872126|gb|EEX79195.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260917513|gb|EEX84374.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261739921|gb|EEY27847.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|297173595|gb|EFH32959.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 375 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|148558627|ref|YP_001257429.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840] gi|148369912|gb|ABQ62784.1| acyl-CoA dehydrogenase [Brucella ovis ATCC 25840] Length = 375 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|221069364|ref|ZP_03545469.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220714387|gb|EED69755.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 387 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 36/262 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---------- 248 L+E G+D+AA+ + + D Y ++G K W + ++D +++ + Sbjct: 130 FALSEPDAGSDVAAMACEARLEGDH-YVINGEKTWISNGGIADFYVVFVRTGEAPGSRGL 188 Query: 249 ----VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 V+ F V +E +P+ L RLK A E F + L+V Sbjct: 189 SALIVDADTPGFEVAERIEVIAPHPLA--RLKFSSCRVPAAQRVGEAGEGFKVAMRTLDV 246 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 V A S+ R ++ EA+ A R++ GG+L D + + +A +A Sbjct: 247 FRTSV-----------AAASLGFARRAMDEALQRATSRNMFGGVLADFQLTQAKLAQMAT 295 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I +A L++R A D+ +S + EAA A++ A + A VI A++ GG G Sbjct: 296 QIDSAALLTYRAAWLRDQGESVTREAAMAKMTA-------TENAQQVIDAAVQIWGGLGV 348 Query: 425 IEERSIARHYRESPANSILLGS 446 + E+ + R YRE A I G+ Sbjct: 349 VSEQPVERLYREIRALRIYEGA 370 >gi|296270064|ref|YP_003652696.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296092851|gb|ADG88803.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length = 386 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 32/273 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFI-MLAQ 248 M S+ + LTE GG+D+ A+ + DG Y + G K ++S+ + I +L + Sbjct: 111 MADGSIRAAMALTEPDGGSDLQAMRTVATLTPDGTAYRVRGVKTWISNARHASVIGLLCK 170 Query: 249 VEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + R + LV R +G R K+G R E+ F + + D Sbjct: 171 TDPRAEPRHKGISVLLVHR------DHGYTVSRKLPKLGYRGVEACEVVFDDVT--VPAD 222 Query: 302 LNVSTGPVED-MKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355 + P +++ L+ + V+ V +A+A + YAR+R G + + Sbjct: 223 AVLGGEPGRGWAQMMRGLEVGRVQVAARAVGVAQAAFDDALAYARQRETFGKPIWQHQSV 282 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +AD+A + AA L+ A+ D+ K EA A++ A + A V +A Sbjct: 283 GNLLADMATKVHAARLLTLDAAHRIDQGKRADLEAGMAKLFA-------SEAAMQVALDA 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG+GY E + R++R++P +++G G Sbjct: 336 IRVHGGNGYSREYDVERYFRDAPL--MIVGEGT 366 >gi|302866027|ref|YP_003834664.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302568886|gb|ADL45088.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora aurantiaca ATCC 27029] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 43/299 (14%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT K W P S + + + ++E G+D+A I + + D Sbjct: 102 LTTGDQRKRWLPGFCSGD-------------LVTAIAMSEPGAGSDLAGIRTSAVRDGDS 148 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 + L+G K F+++ M+D +++A+ +G G LV ++E G+P G R K+G Sbjct: 149 L-VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLV--VVESGTP-GFSRGRRLAKVG 204 Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331 ++N T EL F + L+G N ++ P E + I A+ +V+ Sbjct: 205 LKANDTAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSI------AVAAVAACEKL 258 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 LA I YAR R G + + +A++ ++ A F+ + +AA Sbjct: 259 LALTIEYARSREAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAA 318 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ V ++ GG G++ E +A+ + +S +I G+ M Sbjct: 319 KA-------KWWTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIM 370 >gi|302534510|ref|ZP_07286852.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] gi|302443405|gb|EFL15221.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] Length = 385 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 41/272 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 L +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ E R Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTSAPSAEDR 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F + D G R +K+G +++ T EL F D+ V PVED+ Sbjct: 184 R--FGISLFAVDTKSEGYSIGRKLDKLGLKTSDTAELAFV--------DVKV---PVEDL 230 Query: 313 -----KILIYLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358 K YL + S ++ + A A +++V+ + +PV K Sbjct: 231 LGEEGKGFYYLGHNLASERWGIAFGAYAQAAAAVRFAQQYVTDRTVFGKPVSHFQNTKFE 290 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A ++ AA A++ R + D + EAA A++ +C ++A VI ++ Sbjct: 291 LAACQAEVDAAQAVADRALEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQL 343 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375 >gi|227538607|ref|ZP_03968656.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227241526|gb|EEI91541.1| butyryl-CoA dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + + + D Y L+G K W + +D ++++AQ G + Sbjct: 125 LSEPEAGSDATSQHTLAEDKGDH-YLLNGTKNWITNGGNADYYLVIAQTHPDKGHRGINV 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 L+ + G +NK+G RS+ T L FS+ FGF + G Sbjct: 184 LIVEKGMEGFTIGPKENKLGIRSSDTHSLMFSDVKVPKENRIGEDGFGFKFAMKTLDGG- 242 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +I I + ++ ++LA YA+ R G + + ++ +AD+ ++I A Sbjct: 243 ----RIGIAAQALGIAAGAYELALA----YAKERKTFGKPISEHQAIQFKLADMEMEIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A D + + AA A++ A ++A EA++ GG GY++E Sbjct: 295 ARLLIHKAAWLKDNGQPYGKAAAMAKLFA-------SEVAMKTTIEAIQIHGGYGYVKEY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 HVERLMRDAKITQIYEGT 365 >gi|46199085|ref|YP_004752.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27] gi|46196709|gb|AAS81125.1| putative acyl-CoA dehydrogenase [Thermus thermophilus HB27] Length = 381 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA+ ++ + D Y L+G K W + ++ ++ A Sbjct: 114 PLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 172 Query: 249 VEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294 V + +V ++E G+P G ++ K+G R++ T EL F + Sbjct: 173 VNPELRHKGVVALVVERGTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 231 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 F + LN + PV A SV R +L EA YA+ R G + + Sbjct: 232 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEARKYAKERQAFGQPIANFQ 280 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+ + I A ++ A D+ + +A I K + ++A Sbjct: 281 AIQFKLADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 333 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY+ E + + R+ N I G+ Sbjct: 334 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 366 >gi|254185414|ref|ZP_04892002.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|184209649|gb|EDU06692.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] Length = 1289 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G++ AI S Q+ G + +SG K W SS + + A+ G +V Sbjct: 755 LTEPDAGSNARAIASVAQRADGGHWVVSGRKSWSGSSAWAGVINVFAKQAD--GAGMVGL 812 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 L G+P GL +G R T+ LE + + LG + Sbjct: 813 ALRQGTP-GLRIGAEDLTMGVRGMIQNTLHLERARVSDACRLGAPGQGMAVAQQAMNFAR 871 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ + D+ I A +AL +L Sbjct: 872 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLSRQRLGDLRHRIDALSALIEQL 930 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 931 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQLFRD 984 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLFEQL 468 + I G ++ + + LL G +L L Sbjct: 985 ARLPRIFEGPTETLLAHLGSRLLNGGDDLLGYL 1017 >gi|322818856|gb|EFZ26146.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 407 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 30/309 (9%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 VH IF R + A P +S LTE G+D A+ ++ +K D + Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ +D F+++A V+ G CF+V + +G+ R +K+G Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335 R+++TVE+ F N + + NV + +I I L+ + + V +A+ Sbjct: 229 LRASSTVEINFENC---EVPEENVIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + Y +R + D ++ A A +I AA + + A +S +EAA A+ Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAQCATNIYAARLMVYNAARKKLMGESFVKEAAMAK 345 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + ++A ++A+E GG G+ + + R YR++ +I G+ + + Sbjct: 346 LFGS-------QVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIGAIYEGTSIIQLQTI 398 Query: 455 LNLLEKGTN 463 L++K N Sbjct: 399 AKLIKKEYN 407 >gi|315925275|ref|ZP_07921487.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621396|gb|EFV01365.1| acyl-CoA dehydrogenase [Pseudoramibacter alactolyticus ATCC 23263] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 35/263 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA----QVEGRVG 254 GLTE G+D A + K D Y L+G K F+++ ++D + + A + G G Sbjct: 121 FGLTEPGAGSDPGAGKTVAVKDGDD-YILNGQKCFITNGGIADFYCITALTDKEAPGTHG 179 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPV 309 + L+E +P GL + ++K+G R SNT +L D+ N+ G Sbjct: 180 MSIF--LVEKDTP-GLSHGVEEDKMGIR--------LSNTTDVILEDVRVPKENLLGGEG 228 Query: 310 EDMKI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + I + LD A ++S + ++ EAI Y + R G ++ M+ IAD+A Sbjct: 229 KGFAIAMKTLDQARAWMGVVSTGLAQRAMNEAIAYTKERKQFGRPVLKFQAMQFKIADMA 288 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + I A+ ++ D+ S EAA A+ A T C EA++ GG G Sbjct: 289 IKIEASRQMNAYALTLMDQGVPFSREAAIAKCFASDTAMECT-------TEAVQMFGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI + + + R++ I G+ Sbjct: 342 YIRDYPVEKLMRDAKIFQIFEGT 364 >gi|323528144|ref|YP_004230296.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] gi|323385146|gb|ADX57236.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp. CCGE1001] Length = 377 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255 LTE + G++ + ++ + DG + L+G+K F+++ +D I+ A + G+ G Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGNKQFVTNGARADIAIVFAVTDPDRGKRGLSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G + ++K+G R++ T + + + + N+ P E ++I Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---TVPEANLLGEPGEGLRIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L+ + ++ V +A A YA R G L D + +AD+A + AA Sbjct: 236 LSNLEGGRIGIAAQAVGIARAAFDAARVYASERMQFGKALKDHQTIANMLADMATRLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A + EA+ A++ A T C + A++ GG GY+E+ + Sbjct: 296 RLLVHHAARLRSAGERCLSEASQAKLFASETAEQIC-------SNAIQIHGGYGYLEDYA 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|264678921|ref|YP_003278828.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262209434|gb|ACY33532.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 388 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254 LTE G+D A++ ++ + + + Y ++G K F+S S ++L G G Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP G+ Y + + K+G S T + F N + N+ E KI Sbjct: 183 AFAVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +L +A Y + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKAIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + RLA S +A +R S A A+ A + C EA++ GG GYI Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346 Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 E + R R++ + IL G+ M V+ +LE Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380 >gi|256788970|ref|ZP_05527401.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289772858|ref|ZP_06532236.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] gi|289703057|gb|EFD70486.1| acyl-CoA dehydrogenase [Streptomyces lividans TK24] Length = 391 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D A++ ++ + S G + ++G K W ++D + ++A+ +G G F Sbjct: 133 LSEPASGSDAASLRTKAVRESGGDWVITGTKAWITHGGIADFYTVMARTGEDGPRGITAF 192 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP E GL + K+G + + T ++ G + D + I L Sbjct: 193 LVPADAE-----GLSAAVPEKKMGLKGSPTAQVHLD---GVRVPDARRLGDEGQGFAIAL 244 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A Sbjct: 245 SALDSGRLGIAACAIGVAQAALDEALSYATGRRQFGKPIADFQGLRFMLADMATQIEAGR 304 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D +++AA A K C A V +A++ +GG GY + Sbjct: 305 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTDAVQILGGYGYTADFPA 357 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 358 ERYMREAKVLQIVEGT 373 >gi|163793207|ref|ZP_02187183.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199] gi|159181853|gb|EDP66365.1| Acyl-CoA dehydrogenase [alpha proteobacterium BAL199] Length = 410 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 31/287 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D + ++ K +DG Y +SG K W +SP++D F++ A Sbjct: 141 PKLATGEWVGCFGLTEPDHGSDPGGMKTRAVK-ADGGYLVSGAKMWITNSPIADVFVVWA 199 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + +G + F++ + ++ GL +++ K R++ T E+ F LL ++ Sbjct: 200 KTDDGVIRGFILEKGMK-----GLSAPKIEGKFSLRASITGEIVMDGVFVPEENLLPNVK 254 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRA 358 +GP L+ A +S + AEA +A R R G L ++++ Sbjct: 255 GLSGP------FGCLNKARYGISWGALGAAEACWHASRQYTLDRKQFGRPLAANQLIQKK 308 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ +I RL DE ++ E + + K C + + A + Sbjct: 309 LADMQTEITLGLQSCLRLGRLMDEGRAAPEAIS-------LCKRNSCGKSLDIARMARDM 361 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 GG+G +E + RH A + G+ + L +L + G F Sbjct: 362 HGGNGVSDEYHVIRHVMNLEAVNTYEGTHDVHAL-ILGRAQTGLQAF 407 >gi|332971447|gb|EGK10401.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 396 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 34/286 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + + GLTE G+D A + + + D Y L+G+K F+++ ++ +++ A Sbjct: 129 PLAEGTKLGAYGLTEPGSGSDAAGMRTTAVRDGDA-YILNGNKIFITNGGEAEIYVVFAV 187 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + V + + G + + K+G RS+ T E+ F D + P Sbjct: 188 TDPEKKHHGVTAFIVEKETPGFSIGKKEQKLGIRSSPTTEIIFE--------DCRI---P 236 Query: 309 VED--------MKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPV 354 VE+ KI ++ LD ++ V +A+ A YA+ R G + Sbjct: 237 VENRLGEEGQGFKIAMMTLDGGRNGIAAQAVGIAQGALDAATAYAKERKQFGKPIGKLQA 296 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ +AD+A I AA L+++ A S+ Y + A + K + A V E Sbjct: 297 IQFKLADMATQIEAARLLTYQAA------WLESQGLPYGKASA-MAKLYAGDAAMQVTTE 349 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 A++ GG GY E + R R++ I G+ + + N L K Sbjct: 350 AVQVFGGYGYTREYPVERFMRDAKITQIYEGTNEIQRVVIANHLMK 395 >gi|312958955|ref|ZP_07773474.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6] gi|311286725|gb|EFQ65287.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens WH6] Length = 378 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTSA--VLDGDEYVINGSKTFITNGYLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 L G + K+G ++ T EL F + F +L+ +L Sbjct: 182 TSLFLVQADTPGFAKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + AI ++S +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------AIGALSSAEAALQWTLEYTRERKAFGKAIADFQNTRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I D+ + + A + KYW + V+ E ++ GG G Sbjct: 291 TEIQIGRVF-------IDQCMALHLQGRLDVPTAAMAKYWATDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E IAR + ++ I G+ M Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370 >gi|124007696|ref|ZP_01692399.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134] gi|123986818|gb|EAY26590.1| acyl-CoA dehydrogenase 1 [Microscilla marina ATCC 23134] Length = 406 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 38/270 (14%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 K + PK+ S EY +G GLTE G++ + + S+ + D Y L+G Sbjct: 135 KKYLPKLASGEY--------------LGCFGLTEPNHGSNPSGMESRLEDKGDH-YVLNG 179 Query: 231 HK-WFLSSPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W +SP +D ++ A+ EGR+ +V R +E G + +K R++ T E Sbjct: 180 AKMWITNSPKADIAVVWAKNDEGRILGVIVERGME-----GFSTPTIHDKWSLRASVTGE 234 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRH 343 L F++ + NV G L LDSA +S + +A A YA R Sbjct: 235 LVFNDV---KIPKENVLPGVSGLKGPLNCLDSARYGISWGAIGVAMDCYDTARRYALERK 291 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G + ++++ +A++ +I A +S+RL +E K+ + + + A K Sbjct: 292 QFGKPIAGFQLIQKKLAEMLTEITKAQLVSWRLGVLKNEGKATTAQVSLA-------KRN 344 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++A EA + +GG G +E SI RH Sbjct: 345 NIEIAMHTAREARQILGGMGITQEYSIMRH 374 >gi|169624459|ref|XP_001805635.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15] gi|111056034|gb|EAT77154.1| hypothetical protein SNOG_15489 [Phaeosphaeria nodorum SN15] Length = 449 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 39/289 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 L SV A + T K W P +F E + LG+TE GG+D Sbjct: 137 LAGASVIGAPPIIHHGTEEQKKKWLPGLFDWE-------------TSFCLGITEPSGGSD 183 Query: 211 IAAITSQGQKISDGI-YCLSGH-KWFLSSP----MSDAFIMLAQVEGRVGCFLVPRLLED 264 +A I + K DG Y ++G+ KW P M+ A + G G ++ ++ Sbjct: 184 VANILTTANKSPDGKSYIINGYKKWITGMPWATHMTTAVRTGSPDSGARGLSVI--VIPT 241 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY---L 318 S +GL ++R++N G ++ +E N LLG N E KI++ Sbjct: 242 NS-SGLTWRRIENS-GQKAGGASFVELDNVSVPVENLLGKEN------EGFKIIMTNFNK 293 Query: 319 DSAIMSVS---GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + IMS+ R L+E+ YA +RH G ++ ++ +A I + + A + Sbjct: 294 ERFIMSIGCNRKARTCLSESFDYASKRHTFGKPILSNQIIAHKLATIGRYVESHWAWLEQ 353 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 LA ++ + ++ A +A + K ++ EA + GG+GY Sbjct: 354 LAYHIQQSPAGWQDPEIAGQIA-LAKVHGGRITEMANREAQQIFGGAGY 401 >gi|108803226|ref|YP_643163.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764469|gb|ABG03351.1| acyl-CoA dehydrogenase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 385 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 17/248 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 PM + LTE G+D A+ ++ ++ +G Y + G K W ++ +D ++ A+ Sbjct: 119 PMARLEKLGAFALTEPEHGSDAVALETRARRRGEG-YVIDGRKRWVGNASFADVILVWAR 177 Query: 249 V-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 EG VG F+V R G+P GL + + K RS+ E+E S L + Sbjct: 178 DDEGEVGAFVVER----GAP-GLSARVMAGKTAVRSSWQAEVELSGVEVPAENRLERARS 232 Query: 308 PVEDMKILIYL--DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + ++L + +A ++ A+ +AR R G L+ ++++ +A + + Sbjct: 233 FRDASRVLAAMRYGAAWAALGHAAACYEAALAHARERRQFGRPLVSFQLVQKKLAGMLAE 292 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I + L RL+ D+ K MA + K + A V EA + +GG+G + Sbjct: 293 ITSMQLLCLRLSRLADQGKMTG-------AMASLAKMNNARKARGVCLEARDILGGNGLL 345 Query: 426 EERSIARH 433 E +ARH Sbjct: 346 LEHHVARH 353 >gi|317147952|ref|XP_001822404.2| acyl-CoA dehydrogenase [Aspergillus oryzae RIB40] Length = 437 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 17/302 (5%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A T + W PK+ K + LG+TE G+D+A I++ ++ Sbjct: 133 IARFGTKEQRQRWLPKV-------------AKGDIRCCLGITEPDAGSDVANISTTARRE 179 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 D +Y ++G K ++++ + + A G G + L+ + G+ +R+ N + Sbjct: 180 GD-VYVVNGAKKWITNGIWADYCTAAVRTGGPGKGGISLLVIPLAAPGVTRRRMYNSGVH 238 Query: 282 RSNAT-VELE-FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 S +T +EL+ L+G+ N + L A S+ RV +A HYA Sbjct: 239 ASGSTFIELDDVRVPVDHLIGEENKGFPLIMSNFNPERLSLACASLRLARVCAEDAFHYA 298 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 +R G LI + ++ I L I A A +L N + K R + M + Sbjct: 299 TQRETFGAPLITRQAIQSKIFKFGLMIEPAYAFMEQLVNIIELTKDRPTDDVRIGGMTAL 358 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNLL 458 K + + EA + +GG+GY + AR + S A ++G G+ ++ L L Sbjct: 359 LKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLALQ 418 Query: 459 EK 460 E+ Sbjct: 419 EE 420 >gi|306840636|ref|ZP_07473388.1| acyl-CoA dehydrogenase [Brucella sp. BO2] gi|306289374|gb|EFM60610.1| acyl-CoA dehydrogenase [Brucella sp. BO2] Length = 375 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D +A+ ++ + D Y + G K F++S + +++ V G+ G Sbjct: 120 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 179 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 290 IETARQIVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 343 ADYPVERIYRDVRVCQIYEGTSDVQRL 369 >gi|269837230|ref|YP_003319458.1| acyl-CoA dehydrogenase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786493|gb|ACZ38636.1| acyl-CoA dehydrogenase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 381 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 26/268 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLA 247 P+ + + GLTE + G+D A ++ + DG + ++G K F ++ ++ I+ A Sbjct: 113 PLAEGKMLGAFGLTEPQAGSDAGA--TRTTAVRDGNEFVINGQKVFTTNGSIAGVIIVTA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNV 304 + G + ++ G+ + + + K+G + T ++ F + LLG Sbjct: 171 VTDPEAGRRGISNIIVPADAPGVSFGQDQEKMGLHGSVTSQVYFQDCRVPVDNLLGR--- 227 Query: 305 STGPVEDMK-ILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRA 358 P E + L LD + + M V +A+A YA R G + D + Sbjct: 228 ---PGEGFRQFLQVLDGGRIGIGAMSVGIAQAALRAARDYALEREQFGQRIADFQAISFM 284 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A + AA L +R A D + EAA A++ A C +A++ Sbjct: 285 LADMATQLEAARWLVYRAAWLKDRGLPHTTEAAMAKLFASEAAERICH-------KAIQI 337 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG GY E + R+YR+ I G+ Sbjct: 338 HGGYGYTTEYPVERYYRDVRLTEIGEGT 365 >gi|126663014|ref|ZP_01734012.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38] gi|126624672|gb|EAZ95362.1| acyl-CoA dehydrogenase [Flavobacteria bacterium BAL38] Length = 392 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G++ A + + + + D Y L+G K W ++P +D ++ A Sbjct: 125 PKLATGEFIGCFGLTEPDYGSNPAGMVTNYKDMGDH-YLLNGAKMWISNAPFADIAVVWA 183 Query: 248 Q-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + EGR+ +V R +E G NK R++AT EL F N LL + + Sbjct: 184 KNEEGRIHGLIVERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKS 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRA 358 P L LDSA ++ + A + R+ I D+P+ ++ Sbjct: 239 GLGAP------LGCLDSARYGIAWGAIGAAMDCYDTALRYSKERIQFDKPIGATQLQQKK 292 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++ +I A L++RL +E K+ + + + A K MA + +A + Sbjct: 293 LAEMITEITKAQLLTWRLGVLRNEGKATTAQISMA-------KRNNVDMALTIARDARQM 345 Query: 419 IGGSGYIEERSIARH 433 +GG G E SI RH Sbjct: 346 LGGMGITGEYSIMRH 360 >gi|91780345|ref|YP_555552.1| long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91693005|gb|ABE36202.1| Long-chain acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 126/266 (47%), Gaps = 31/266 (11%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------QVEG 251 + + +TE G+D+A + ++ ++ D + L+G K ++S+ ++ +++A + G Sbjct: 122 LAIAMTEPDAGSDLAGMKTRAEETGD-YWVLNGSKTYISNGLNADVVLVAARTHPTKAHG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + FLV R +E ++R +N K+G +S T EL F + +LG V Sbjct: 181 -LTLFLVERGMEG-------FERGRNLRKMGLKSQDTAELFFHDVKIPKSHVLG--QVHA 230 Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G M+ L L +AI +V+ R+++ + R R V G L + +A + Sbjct: 231 GFQHLMRGLAEERLLAAIFNVASARLAMHLTCDFVRERKVFGKPLSSFQNTRFKLAALDT 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I A + RL + + + +AA A++ + ++ ++ E ++ GG+GY Sbjct: 291 EIEVAQSWVDRLVAEHNADQLDAVDAARAKL-------FTSELNGRMVDEGVQQHGGAGY 343 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 ++E I R Y++ + IL G+ M Sbjct: 344 MDEYEICRLYQDERIHRILAGTSEIM 369 >gi|326389651|ref|ZP_08211217.1| acyl-CoA dehydrogenase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325994366|gb|EGD52792.1| acyl-CoA dehydrogenase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLA 247 P+ K LTE GTD AA Q + +G Y L+G K F+++ +D +I+ A Sbjct: 113 PLAKGEKLGAFALTEPNAGTDAAA--QQTTAVLEGDHYILNGSKIFITNGGKADVYIVFA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + G + + + G +++ K+G R + EL F + ++ N+ Sbjct: 171 MTDKSKGTKGISAFIVEKDFPGFYIGKVEEKMGIRGSRAAELVFEDC---VVPKENLLGK 227 Query: 308 PVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 E KI ++ LD + + + +A+A Y + R G + ++ IA+ Sbjct: 228 EGEGFKIAMVTLDGGRIGIGAQALGIAQAALDEVTKYVKERQQFGRPIGKFQGLQWYIAE 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A ++AA L + A S + EAA A++ A T A V +A++ GG Sbjct: 288 MATKVSAARHLVYYAAWRKQNNLSYTMEAAMAKLFASET-------AMEVTTKAVQIFGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459 GY ++ + R R++ I G+ + + NLL+ Sbjct: 341 YGYTKDYPVERLMRDAKITEIYEGTSEVQKMVIASNLLK 379 >gi|304310713|ref|YP_003810311.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1] gi|301796446|emb|CBL44654.1| acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 27/288 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K + ++E G+D+AAI ++ +K DG Y ++G K W +S +D F +LA Sbjct: 113 PALKGEYVASIAVSEPAAGSDVAAIKTRAEK-KDGDYVINGTKMWITNSTQADWFCLLAN 171 Query: 249 V-EG----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 EG +VPR G+ + NK+G RS+ T ++ F N +L Sbjct: 172 TSEGSKHKNKSMIIVPR-----DAKGIEVSKPLNKLGMRSSDTAQVFFDNVH-VPQRNLV 225 Query: 304 VSTGPVEDMKILIYLD----SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 G M+++ + + A + GM + E I Y R+R G LI+ + Sbjct: 226 GMEGAGFMMQMMQFQEERMWGAANAYGGMNGLIQETIAYTRQRETFGQPLINNQSIHFRF 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++ A AL + + + ++ +A + K ++ + ++ Sbjct: 286 AELQTEVEALRALIYHTCELYISNGNPTKTLQ----LASMCKLKAGRLVREISDSCLQYW 341 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV------LDVLNLLEKG 461 GG G++ + AR R+ SI G+ M+ +D+L KG Sbjct: 342 GGMGFMWDNVAARSLRDGRLASIGGGADEIMLGIICKTMDILPGKAKG 389 >gi|264679746|ref|YP_003279655.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] gi|262210261|gb|ACY34359.1| acyl-CoA dehydrogenase-like protein [Comamonas testosteroni CNB-2] Length = 397 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F D+ GP L+SA ++ + AE A Y R G Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCG 337 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364 >gi|254719151|ref|ZP_05180962.1| glutaryl-CoA dehydrogenase [Brucella sp. 83/13] gi|265984146|ref|ZP_06096881.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306838143|ref|ZP_07470999.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653] gi|306841812|ref|ZP_07474495.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2] gi|264662738|gb|EEZ32999.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|306288093|gb|EFM59487.1| glutaryl-CoA dehydrogenase [Brucella sp. BO2] gi|306406733|gb|EFM62956.1| glutaryl-CoA dehydrogenase [Brucella sp. NF 2653] Length = 394 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|229097606|ref|ZP_04228565.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-29] gi|229116605|ref|ZP_04245992.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock1-3] gi|228666915|gb|EEL22370.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock1-3] gi|228685876|gb|EEL39795.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus Rock3-29] Length = 382 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 39/244 (15%) Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262 RGG QG+K + ++G K F + +P+ D FI+ A +EGR VG F++PR Sbjct: 136 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 188 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315 + G+ + + + R A+ +L E N F NV G V+ I L Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TNVLGGKVKQKGIGWL 240 Query: 316 IYLDSAIMSVS----GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +++ + + ++ V AE+ H S +L P ++R + +I L++ A Sbjct: 241 LHIPACYLGIAQSARNYAVQFAESYKPNSLNH-SISLL---PSVRRLVGEIELELMQARV 296 Query: 372 LSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +++A +DEA+ + S +A A + KY A +++ +AM +G E+ + Sbjct: 297 FLYQIAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKAMRIVGAKSLSEKNPL 351 Query: 431 ARHY 434 R+Y Sbjct: 352 HRYY 355 >gi|23501963|ref|NP_698090.1| glutaryl-CoA dehydrogenase [Brucella suis 1330] gi|163843352|ref|YP_001627756.1| glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445] gi|225627560|ref|ZP_03785597.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|254704378|ref|ZP_05166206.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] gi|254706728|ref|ZP_05168556.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10] gi|254710165|ref|ZP_05171976.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|254714164|ref|ZP_05175975.1| glutaryl-CoA dehydrogenase [Brucella ceti M644/93/1] gi|254717599|ref|ZP_05179410.1| glutaryl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|256031660|ref|ZP_05445274.1| glutaryl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256061171|ref|ZP_05451324.1| glutaryl-CoA dehydrogenase [Brucella neotomae 5K33] gi|256369513|ref|YP_003107023.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915] gi|260168793|ref|ZP_05755604.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99] gi|261219432|ref|ZP_05933713.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261314191|ref|ZP_05953388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317720|ref|ZP_05956917.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261321928|ref|ZP_05961125.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261325175|ref|ZP_05964372.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261755051|ref|ZP_05998760.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261758275|ref|ZP_06001984.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99] gi|265988751|ref|ZP_06101308.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294852332|ref|ZP_06793005.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] gi|23347910|gb|AAN30005.1| glutaryl-CoA dehydrogenase [Brucella suis 1330] gi|163674075|gb|ABY38186.1| Glutaryl-CoA dehydrogenase [Brucella suis ATCC 23445] gi|225617565|gb|EEH14610.1| Acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|255999675|gb|ACU48074.1| glutaryl-CoA dehydrogenase [Brucella microti CCM 4915] gi|260924521|gb|EEX91089.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261294618|gb|EEX98114.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261296943|gb|EEY00440.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261301155|gb|EEY04652.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261303217|gb|EEY06714.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738259|gb|EEY26255.1| glutaryl-CoA dehydrogenase [Brucella sp. F5/99] gi|261744804|gb|EEY32730.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|264660948|gb|EEZ31209.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294820921|gb|EFG37920.1| glutaryl-CoA dehydrogenase [Brucella sp. NVSL 07-0026] Length = 394 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|239945565|ref|ZP_04697502.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239992032|ref|ZP_04712696.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291449020|ref|ZP_06588410.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces roseosporus NRRL 15998] gi|291351967|gb|EFE78871.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces roseosporus NRRL 15998] Length = 404 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 59/311 (18%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ--KISDG 224 TP +W P+ F E DP A ++E G+D++A+T++ + + +D Sbjct: 104 TPDQLAEWVPQCFGDEDDPKVAA----------FCVSEPGAGSDVSAMTTRARYDEAADE 153 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 + +SG K W + +++ +++A V+ +G F+VP GL R K Sbjct: 154 -WAISGQKAWITNGGIAEVHVVVASVDPSLGSRGQAAFIVPP-----GTKGLTAGRTVKK 207 Query: 279 IGNRSNATVELEFSNT---FGFLLG-------------DLNVSTGPVEDMKILIYLDSAI 322 +G R++ T +L + LLG + + + G + + Sbjct: 208 LGLRASHTADLFLDDVRVPGHCLLGGKERLDARLARAREGSTAKGQAAMATFEVSRPTVA 267 Query: 323 MSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA---- 377 G+ R + A+ YA R G +I+ + A+ADI +I A L ++ A Sbjct: 268 AQALGIARAAYEYALEYAGEREAFGRPIIENQSIAFALADIRTEIEAVRLLIWQAAWMAR 327 Query: 378 --NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +FD + ++K ++A A +A++ +GG+GY E + R YR Sbjct: 328 NDRTFDAGQG------------SMSKLRAGELAVAATEKAVQILGGAGYSREHPVERMYR 375 Query: 436 ESPANSILLGS 446 ++ +I G+ Sbjct: 376 DAKIYTIFEGT 386 >gi|218781749|ref|YP_002433067.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763133|gb|ACL05599.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 37/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-----VEGRVG 254 + +TE G+D+ + + ++ D I ++G K F+S+ ++ ++LA + G Sbjct: 123 VAMTEPGAGSDVGGLEATAEEDGDEI-VINGVKTFISNGINCDLVVLAARNPEIADKHAG 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDL 302 L L+EDG+P G + +K+G S T EL FSN GFL+ Sbjct: 182 VSLY--LVEDGTP-GFTRGKHLDKMGMHSQDTAELFFSNCRIPKENILGQKGHGFLM--- 235 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 +E ++ L SAI +V+G +L A+ YA+ V G L +K +A+I Sbjct: 236 -----LMEKLQ-QERLMSAIANVAGAENALKWAVAYAKETMVDGKPLSKSQAVKFKLAEI 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +++ L K + + ++K+ +M +A+ ++ G Sbjct: 290 ATEVSMNRVFLDHLIEEHIAGKDVT-------ALTMMSKFASSEMMNTQLADIIDIFGEY 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 G +E IA+ +R+S +I G+ M Sbjct: 343 GLLESGPIAKGFRDSRITTIFAGTTEIM 370 >gi|83648430|ref|YP_436865.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636473|gb|ABC32440.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 378 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 16/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ + + K D Y L+G K F+++ +D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTAVKNGDH-YVLNGSKTFITNGQHADVVIVVAKTDPKAGAKGT 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + S G + K+G ++ T EL F + LLG N +G + M+ L Sbjct: 183 SLFLVESSWKGFSKGKNLEKVGMKAQDTSELFFQDVMVPMENLLGAEN--SGFIALMQEL 240 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L I ++S +L I Y + R+ G L+ + +A++ ++ A Sbjct: 241 PQERLLVGITAISACEAALDLTIKYCKERNAFGKPLMAFQNTRFKLAELKAEVTAGRVFL 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R + K AA + K W + V+ E ++ GG GY+ E IAR Sbjct: 301 DRCLELHLDKKLDVPTAA-------MLKQWSTDLQCKVMDECVQLHGGYGYMWEYPIARA 353 Query: 434 YRESPANSILLGSGNAM 450 + +S I G+ M Sbjct: 354 WADSRVQKIYAGTNEIM 370 >gi|16082509|ref|NP_393775.1| Acyl-CoA dehydrogenase [Thermoplasma acidophilum DSM 1728] Length = 369 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 69/325 (21%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 ++AL K + K+FS +A M GL +TE GG+D+A I + K Sbjct: 87 VIALFGNDDQKKKYLSKVFS------GQAKM-------GLAVTEPGGGSDVANIKTTAVK 133 Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGR----VGCFLVPRLLEDGSPNGLCYQ 273 D Y L+G K F+++ ++D F++LA+ VE + + F+V R +G Sbjct: 134 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNF-----DGFKSN 187 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMS 324 ++ K+G R+ T EL N P E++ I+ + D + Sbjct: 188 KIHGKLGVRATDTAELTLENV-----------KVPAENLVGEPGRGFYYIMTFFDISRAY 236 Query: 325 VSGMRVSLAEAIHYARRRHV----SGGILIDQPV-MKRAIADIALDIAAATALSFRLAN- 378 V+ + +AE I R V G + QP ++ AIAD+A I AA L++ A+ Sbjct: 237 VAAQALGIAEGIL---ERAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASF 293 Query: 379 --SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 +F+ + + + K + + A V +AME G G +I R +R+ Sbjct: 294 IFNFNPNPA----------VTSMAKAYAAETAVYVSRKAMEITGIDGL--SSNIERSFRD 341 Query: 437 SPANSILLGSGNAMVLDVLNLLEKG 461 + I G+ L + +L+ G Sbjct: 342 AKIMEIWEGTSEIEKLVIARMLKVG 366 >gi|325271301|ref|ZP_08137836.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] gi|324103560|gb|EGC00872.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas sp. TJI-51] Length = 395 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 37/234 (15%) Query: 253 VGCFLVPRLLEDGSPNGLCYQR-------LKNKIGNRSNATVELEFSNT---FGFLLGDL 302 + F+VP+ + P+G C R L +K+G R + L F + G+L+G Sbjct: 21 ISLFIVPKYHVN--PDGSCGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQP 78 Query: 303 NVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYARRR-----------HVSGG 347 + + M +I + + + ++ +G SL YAR+R H S Sbjct: 79 HQGLACMFQMMNEARIGVGMGAVMLGYAGYLYSL----EYARQRPQGRLPDNKDPHSSAV 134 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR------IMAPITK 401 +I +KR + + A L A FD+ ++ S+E+A ++ PI K Sbjct: 135 PIIQHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTQTGSDESARNEAQELLDLLTPIVK 194 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 W A++ +GG GY E + ++YR++ N I G+ LD+L Sbjct: 195 SWPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLL 248 >gi|146339175|ref|YP_001204223.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146191981|emb|CAL75986.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 404 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D A + ++ +K++DG Y L+G K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPAGMKTRAEKVADG-YRLTGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F +LE G GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEDALLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S G+ + + +H AR+ R G L ++++ +AD+ +IA Sbjct: 256 --FGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGRPLAATQLVQKKLADMETEIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K E M I K C A + + + GG+G E Sbjct: 314 LGLQASLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARVSRDMHGGNGIQIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YQVMRH 372 >gi|138520003|gb|AAI35459.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis] Length = 440 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 37/249 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256 GLTE G+D A + ++ + S Y L+G K W +SP++D ++ A E G+V F Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGKVRGF 238 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 L+ R GL +++ K R++AT VE+ N LL +++ GP Sbjct: 239 LIER-----GTKGLSTPKIEGKFSLRASATGMILLEDVEIPEEN----LLPNVSGLGGPF 289 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 L++A +S + AE + R++ I P+ +++ +AD+ Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI RL DE K+ E M + K C A + +A + +GG+G Sbjct: 344 DITIGLQACLRLGRLKDEEKATPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396 Query: 425 IEERSIARH 433 +E I RH Sbjct: 397 SDEYHIIRH 405 >gi|89893686|ref|YP_517173.1| putative acyl-CoA dehydrogenase [Desulfitobacterium hafniense Y51] gi|89333134|dbj|BAE82729.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 381 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 34/271 (12%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 +A LG++E + G+D +AI S + + +Y L+GHK ++S+ + C Sbjct: 117 MAFSLGISEPQAGSDDSAIASTATRRNGKVY-LNGHKTWISNAGEYPY-----------C 164 Query: 256 FLVPRLLEDGSPNG----LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP--- 308 + R + +P+ K I ++ V + S + D+ V Sbjct: 165 LFLTRDSQAPNPHKAISMWWVDMTKPGIKLQAVGKVGFKMSKFYELYFEDVEVEEKDLVG 224 Query: 309 VEDMKILIYLDS-AIMSVSGMRVSLA-------EAIHYARRRHVSGGILIDQPVMKRAIA 360 VE L + + I ++G+ SL +A+ YA +R G + + ++++ I Sbjct: 225 VEGEGFLQLMKNFEIERLAGVAASLGWAQGAFDDAVRYANQRVQFGKPIGNFQLIQKKIT 284 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ + + ++ ++ A E +I + + KY+ + A VI +AM+ G Sbjct: 285 EMQIKLETMRSMLYK-------ACWEKENGLSVQISSALCKYYVARAAQEVIDDAMQIFG 337 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451 G GY E I R +R+ AN I G+ MV Sbjct: 338 GIGYTTETRIQRFWRDCRANRIGGGTDEIMV 368 >gi|145222474|ref|YP_001133152.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214960|gb|ABP44364.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 382 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T++ + D + ++G K +++S + +++ A G G + Sbjct: 124 LAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVVTAARTGGPGAAGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++ D G R +K+G RS+ T EL ++ D+ V V + +L Sbjct: 183 LIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYT--------DVRVPAANVVGAENTGFLQ 234 Query: 320 SAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 A VS RV LA + + R R G LI + ++ +A++A I Sbjct: 235 IAAAFVS-ERVGLAAQAYSSAQRCLDLTVEWCRNRQTFGKPLIARQTVQSTLAEMARRID 293 Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + +LA D E +A+ A W V +A++ GG Sbjct: 294 VARVYTRHVVERQLAGDADLIT----EVCFAKNTAVEAGEW-------VANQAVQLFGGM 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GY+ E + R YR+ + +G G +L L Sbjct: 343 GYMTESEVERQYRD--MRILGIGGGTTEILTSL 373 >gi|299533160|ref|ZP_07046544.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44] gi|298718690|gb|EFI59663.1| glutaryl-CoA dehydrogenase [Comamonas testosteroni S44] Length = 396 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F D+ GP L+SA ++ + AE A Y R G Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLVKRNNCG 337 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364 >gi|253681483|ref|ZP_04862280.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] gi|253561195|gb|EES90647.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum D str. 1873] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD A +Q + DG Y L+G K F++ SP+++ F++ A + G Sbjct: 123 FGLTEPNAGTD--ASGAQTVAVRDGDNYILNGQKCFITNSPLAETFVIFAITDRSKGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G+ ++++K+G R E+ + LLG G MK Sbjct: 181 ISAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGKGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + V+ + LAE A Y + R G L + +AD+ + I + Sbjct: 239 ---LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQS 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L ++ A + + S AA A++ C A V EA++ GG GYI++ Sbjct: 296 RYLLYQAAMDKNNGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITQIYEGT 365 >gi|240277804|gb|EER41312.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus H143] Length = 434 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 46/299 (15%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + + + DG Y L+G K W + Sbjct: 142 NGSPEQKAKFLPGLISGQKIGALAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ + G + + + + G R +K+G R + T EL F + F Sbjct: 201 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG LN +K+L+ L+ ++S M+ +L + Y R G Sbjct: 261 PQENMLGALN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGT 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS-----------RSEEAAYARIM 396 + +++ +AD+ ++A+ A ++ A DEA + R+++ A A + Sbjct: 315 PIAHNQLIQGKLADMYTKLSASRAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILY 374 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 A C +A++ +GG+GYI E R R++ I G+G + + +L Sbjct: 375 AAERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424 >gi|84499962|ref|ZP_00998228.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84391896|gb|EAQ04164.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 386 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 118/269 (43%), Gaps = 24/269 (8%) Query: 190 PMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P+ + AI LTE + G+D+A T + D + L G K W + ++D + + A Sbjct: 115 PLTRKGKAISAFALTEPQSGSDVANSTMTARDDGDA-WVLDGEKTWISNGGIADVYTLFA 173 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 + EG L +L +P +RL + I AT L FS G L + Sbjct: 174 RTGEGPGAKGLSAFILPGDTPGLEIAERL-DTIAPHPLAT--LRFS---GARLPKSALIG 227 Query: 307 GPVEDMKILI-YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 P + +I + LD +V+ R +L EA R V G L D +++ IA Sbjct: 228 QPGQGFRIAMSVLDVFRTTVAAAALGFARRALDEATARVMSREVQGKPLADLQMVQAHIA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 ++AL + AA L +R A + D SR S EAA A++ A A VI A++ Sbjct: 288 EMALRVDAAALLVYRAAWTKDSGASRVSREAAMAKLFA-------TDEAQKVIDAAVQLH 340 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGN 448 GG G ++ R YRE A I G+ + Sbjct: 341 GGDGVRSGNTVERLYREIRALRIYEGASD 369 >gi|103488634|ref|YP_618195.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98978711|gb|ABF54862.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 384 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/298 (22%), Positives = 121/298 (40%), Gaps = 53/298 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG 230 K W PK+ S E V + +TE G+D+ + + +K DG Y ++G Sbjct: 113 KHWLPKMVSGE-------------VITAIAMTEPGTGSDLQGMRTTAKK--DGNHYVING 157 Query: 231 HKWFLSSPMSDAFIML---AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 K ++++ + I++ + R V +L + +G R +KIG T Sbjct: 158 SKTYITNGQNADLILVCVKTDPDARPAWKGVSIVLVEADRDGFERGRNLDKIGQDEADTS 217 Query: 288 ELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 EL F++ F +L+ +L P E + I AI + + + + Sbjct: 218 ELFFNDVRVPITNCLGEEGQGFIYLMSEL-----PQERLSI------AISAQASAQRAFD 266 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-LSFRLANSFDEAKSRSEEAAY 392 + + Y R R G ++D + +AD+ + A L + LA + + E AA Sbjct: 267 DTVEYTRERKAFGKPILDFQNSRFVLADLKAKLQVGWAHLDWALARHLKKELTPEEGAA- 325 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K W ++ V+ + ++ GG+GY+ E IAR +R + I G+ M Sbjct: 326 -------AKLWHTELQWEVMDKCLQLFGGAGYMNEYPIARAWRAARVTRIFGGTNEIM 376 >gi|134278577|ref|ZP_01765291.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] gi|134250361|gb|EBA50441.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 305] Length = 383 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRTRKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R YR++ SI G+ M+ Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370 >gi|262371624|ref|ZP_06064903.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] gi|262311649|gb|EEY92734.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter junii SH205] Length = 386 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/274 (19%), Positives = 115/274 (41%), Gaps = 12/274 (4%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + + ++E G+D+AA+ + +K D Y ++G K W +S +D F +LA Sbjct: 113 PAIRGEYVASIAVSEVHAGSDVAAVKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLAN 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 ++ G+ + NK+G RS T ++ F N L+G + Sbjct: 172 TSDDKPHVNKSMIIVPAKTAGISFSEPLNKLGMRSTTTAQVYFDNVRVPQRNLVGAEGMG 231 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + + +V G+ + + I YA+ R G LI+ + A++ + Sbjct: 232 FMMQMMQFQEERMWACANAVGGLENVIQQTIDYAKERTTFGQPLINNQYVHFRFAELMTE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A AL+++ ++ + ++A + K ++ V ++ GG+G++ Sbjct: 292 VEALKALTYQACEQHIAGENVT-------MLASMAKLKSGRLTREVADTCLQYWGGNGFM 344 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 + ++ YR+ SI G+ M+ + L++ Sbjct: 345 WDNPASQLYRDGRLGSIGGGADEIMLGIICKLMD 378 >gi|238059128|ref|ZP_04603837.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149] gi|237880939|gb|EEP69767.1| acyl-CoA dehydrogenase [Micromonospora sp. ATCC 39149] Length = 226 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 7/131 (5%) Query: 349 LIDQPVMKRAIADIALDIAAATALS---FRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 + D P+ + + +A+D AAA L+ F L E + + AA R++AP+ K Sbjct: 1 MADNPLHRATLGVLAVDTAAAFVLAGHAFALLGRV-EVGADPDAAAELRVVAPLAKLATG 59 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK---GT 462 ++A A +E +E GG+GY+E+ + R R++ I G+ N + LDVL + + G Sbjct: 60 RLAVACASEYVEAFGGAGYVEDTGVPRLLRDAQVLPIWEGTTNVLALDVLRAVSREDAGG 119 Query: 463 NLFEQLFSTLE 473 L +L + ++ Sbjct: 120 PLLRRLAAAVD 130 >gi|15790481|ref|NP_280305.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|169236217|ref|YP_001689417.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] gi|10580979|gb|AAG19785.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|167727283|emb|CAP14069.1| acyl-CoA dehydrogenase [Halobacterium salinarum R1] Length = 374 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 26/257 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGC 255 L+E G++ A +++ ++ D + L+G K W + S I+ A+++G ++ Sbjct: 120 FALSEPDAGSNPAQMSTTARRDGDE-FVLNGKKQWITNGKRSGVVIVFAKIDGDDDKITQ 178 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLVP+ +GL ++K+G R++ T L F + + N T + Sbjct: 179 FLVPK-----DADGLTVGPKEDKLGLRASDTTSLLFDDC---RIPASNQLTEAGRGLSAA 230 Query: 316 IY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 ++ L + ++ V L++A A + DQP+ ++ +AD+ + AA Sbjct: 231 LHILTGGRIGIASQAVGLSQAALDAALAYADDREQFDQPISEIQTIRHKLADMETQVQAA 290 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 LS A D + AA A KY+ + A V EA++ GG GY ++ Sbjct: 291 RLLSRDAARMADAGEDHQTAAAKA-------KYFASEAAVDVTNEAVQIHGGYGYTKDFD 343 Query: 430 IARHYRESPANSILLGS 446 + R YR+S +I G+ Sbjct: 344 VERFYRDSKITTIYEGT 360 >gi|62858803|ref|NP_001016289.1| glutaryl-CoA dehydrogenase [Xenopus (Silurana) tropicalis] gi|89266838|emb|CAJ83975.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis] gi|89268079|emb|CAJ82579.1| glutaryl-Coenzyme A dehydrogenase [Xenopus (Silurana) tropicalis] Length = 440 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 37/249 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256 GLTE G+D A + ++ + S Y L+G K W +SP++D ++ A E G+V F Sbjct: 179 FGLTEPNHGSDPAGMETRARYNPSSKTYTLNGAKTWITNSPIADLCVVWAICEDGKVRGF 238 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 L+ R GL +++ K R++AT VE+ N LL +++ GP Sbjct: 239 LIER-----GTKGLSTPKIEGKFSLRASATGMILLEDVEIPEEN----LLPNVSGLGGPF 289 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 L++A +S + AE + R++ I P+ +++ +AD+ Sbjct: 290 G------CLNNARYGISWGALGAAEFCFHTARQYTLDRIQFGVPLARNQLIQKKLADMLT 343 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 DI RL DE K+ E M + K C A + +A + +GG+G Sbjct: 344 DITIGLQACLRLGRLKDEEKATPE-------MISMLKRNSCGKALDIARQARDMLGGNGI 396 Query: 425 IEERSIARH 433 +E I RH Sbjct: 397 SDEYHIIRH 405 >gi|331697454|ref|YP_004333693.1| butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326952143|gb|AEA25840.1| Butyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans CB1190] Length = 384 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 44/314 (14%) Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 AG + +V S +VA T + + + P++ + E T + LTE G Sbjct: 83 AGAMGGHTVVSKLLVAFGTKEQQDR-YLPRMATGEIRAT-------------MALTEPGG 128 Query: 208 GTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRL 261 G+D+ A+T+ ++ D Y ++G K W +S S ++ + + G ++ L Sbjct: 129 GSDLQAMTTTARRDGDD-YVVNGAKTWITNSRRSQLIALMCKTDPAAEPKHRGVSIL--L 185 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL--- 315 +E G GL R K+G + + EL F + +LG G + MK L Sbjct: 186 VEHGP--GLTVSRDLPKLGYKGVESCELSFDDYRTPASSVLGGTE-GRGFAQMMKGLETG 242 Query: 316 -IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I + S + V+ + + +A+ YA+ R G + + +AD+A I AA L Sbjct: 243 RIQVASRALGVA--QAAFDDALAYAQERESFGKPIWQHQSIGNYLADMATKITAARQLIL 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A+ FD + EA A++ A T A V +A+ GG GY E + R++ Sbjct: 301 FAADRFDAGQRCDMEAGMAKLFASET-------AMQVALDAVRIHGGYGYSTEFDVERYF 353 Query: 435 RESPANSILLGSGN 448 R++P +++G G Sbjct: 354 RDAPL--MIVGEGT 365 >gi|311895307|dbj|BAJ27715.1| putative acyl-CoA dehydrogenase [Kitasatospora setae KM-6054] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 22/260 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ AI + D Y L+G K F+S+ ++D +++A+ G + Sbjct: 124 IAMTEPDTGSDLQAIRTTAVDAGDH-YLLNGAKTFISNGILADLVVVVARTTAEGGAHGL 182 Query: 259 PRL-LEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 L +E G+P ++R +N KIG + T EL F + LLG+ N G + M Sbjct: 183 SLLAVERGAPG---FERGRNFDKIGQHAQDTAELFFHDVRVPKTDLLGEEN--QGFLYLM 237 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L L A+ +++ L E I Y +RR G L ++ IA++A + A Sbjct: 238 RNLAQERLAIAVAAIAAAEAVLDETIGYVKRRTAFGRPLARLQHVRFEIAELATECAVTR 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A D A + A + K+W ++ ++ GGSGY+ + ++ Sbjct: 298 AF-------VDRCVREHNRYALTPVDASMAKWWATELQKRAADRCLQLHGGSGYLRDSAV 350 Query: 431 ARHYRESPANSILLGSGNAM 450 AR + + +I G+ M Sbjct: 351 ARAFTDGRVQTIYGGTTEIM 370 >gi|315502587|ref|YP_004081474.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315409206|gb|ADU07323.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 380 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 43/299 (14%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 +TT K W P S + + + ++E G+D+A I + + D Sbjct: 102 LTTGDQRKRWLPGFCSGD-------------LVTAIAMSEPGAGSDLAGIRTSAVRDCDS 148 Query: 225 IYCLSGHKWFLSS-PMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 + L+G K F+++ M+D +++A+ +G G LV ++E G+P G R K+G Sbjct: 149 L-VLNGQKTFITNGEMADLVVVVAKTAPDQGAHGVSLV--VVESGTP-GFSRGRRLAKVG 204 Query: 281 NRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVS 331 ++N T EL F + L+G N ++ P E + I A+ +V+ Sbjct: 205 LKANDTAELFFDDCRVPAENLIGTENHGFYHLMANLPRERLSI------AVAAVAACEKL 258 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 LA I YAR R G + + +A++ ++ A F+ + +AA Sbjct: 259 LALTIEYARSREAFGRPIGRFQHNRFLLAELDTEVTIARTFVNHCVTEFNAGRLSVTDAA 318 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ V ++ GG G++ E +A+ + +S +I G+ M Sbjct: 319 KA-------KWWTTELQTKVADRCVQLHGGYGFMAEYPVAKAWLDSRVQTIYGGTTEIM 370 >gi|149202685|ref|ZP_01879657.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035] gi|149143967|gb|EDM32001.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. TM1035] Length = 387 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRND-RYVLNGTKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + + G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKTMTGFSTSPHFDKLGMRGSNTAELIFDDVEVPFENVLGEEGRGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLAERKQFGQPIGNFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370 >gi|125777102|ref|XP_001359495.1| GA18485 [Drosophila pseudoobscura pseudoobscura] gi|54639239|gb|EAL28641.1| GA18485 [Drosophila pseudoobscura pseudoobscura] Length = 411 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D +A ++ K+ Y L+G K W +S + ++ A ++ + + Sbjct: 152 LSEPGNGSDASAASTTA-KLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHKGITA 210 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 L GL + ++K+G R+++T +L + + V GP E KI + LD Sbjct: 211 FLTAKDVPGLSVGKKESKMGMRASSTCQLVLDD---VQVPQCQVLGGPGEGFKIAMQSLD 267 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ +A+A + Y+++R G L ++++ +AD+A + + L++ Sbjct: 268 CGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTW 327 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D ++EAA A++ A +C + + +GG GY + +Y Sbjct: 328 RAAWLKDNGLPITKEAAMAKLHASEAATYCAH-------QCTQILGGMGYTTDLPAEMYY 380 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R + I G+ + + N Sbjct: 381 RNARVTEIYEGTSEIQRIVIAN 402 >gi|288922878|ref|ZP_06417041.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288345769|gb|EFC80135.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length = 396 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 26/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR---VGCFL 257 L+E G+D AA+ ++ + D Y ++G K W +D + ++A+ + CFL Sbjct: 127 LSEPHAGSDPAAMRTRAVRDGDD-YVINGAKAWTTHGGDADFYTVMARTSDERRGISCFL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G+P GL ++K+G + T + F + + E + I L Sbjct: 186 VPA----GTP-GLSADPPEHKMGLTGSNTATMRFDAVRVPVERRIGAEG---EGLSIALA 237 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + LA+ A+ YA+ R G +ID + +AD+A + +A A Sbjct: 238 GLDSGRLGIAAVATGLAQGALDHAVAYAKEREAFGKAIIDHQGLAFLLADMAAAVGSARA 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A D + EA+ A+++A A V +A++ +GG GY + + Sbjct: 298 TTLAAARLRDLGLPFATEASIAKLVA-------TDNAMKVTTDAVQVLGGYGYTRDFPVE 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ RE+ I G+ + V L G Sbjct: 351 RYMREAKVMQIFEGTNQIQRMVVGRALAAG 380 >gi|254516883|ref|ZP_05128941.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3] gi|219674388|gb|EED30756.1| isovaleryl-CoA dehydrogenase [gamma proteobacterium NOR5-3] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 12/251 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ Q ++ D Y L+G K W + P +D +++ A+ + + G + Sbjct: 130 LAMSEANAGSDVVSMKLQARREGDH-YVLNGTKMWITNGPDADVYVIYAKTDAQAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G +K+G R + T EL F + L VE + + Sbjct: 189 TAFIVERDYPGFSRSPKLDKLGMRGSNTCELVFEDCKVPAENILRAEGKGVEILMSGLDY 248 Query: 319 DSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + ++S V M+ + E + Y R G + + +M+ +AD+ D+ A + + Sbjct: 249 ERTVLSGGPVGIMQACIDEVLPYLHTRQQFGQAIGEFQLMQGKLADMYADLNACRSYLYT 308 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 +A + D + ++ A A I+ + + A + +A++ +GG GY E + R R Sbjct: 309 VAAACDRGEETRQDCA-AVIL------YTAEKATQLALQAIQALGGYGYTNEANAGRLLR 361 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 362 DAKLYEIGAGT 372 >gi|195152876|ref|XP_002017362.1| GL21568 [Drosophila persimilis] gi|194112419|gb|EDW34462.1| GL21568 [Drosophila persimilis] Length = 413 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 18/262 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D +A ++ K+ Y L+G K W +S + ++ A ++ + + Sbjct: 154 LSEPGNGSDASAASTTA-KLDGNSYQLNGTKAWISNSKEASGGVVFATIDKTLKHQGITA 212 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LD 319 L GL + ++K+G R+++T +L + + V GP E KI + LD Sbjct: 213 FLTAKDVPGLSVGKKESKMGMRASSTCQLVLDD---VQVPQCQVLGGPGEGFKIAMQSLD 269 Query: 320 SAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + ++ +A+A + Y+++R G L ++++ +AD+A + + L++ Sbjct: 270 CGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLSRMQLIQQKLADMATRVEVSRLLTW 329 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A D ++EAA A++ A +C + + +GG GY + +Y Sbjct: 330 RAAWLKDNGLPITKEAAMAKLHASEAATYCAH-------QCTQILGGMGYTTDLPAEMYY 382 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R + I G+ + + N Sbjct: 383 RNARVTEIYEGTSEIQRIVIAN 404 >gi|307545521|ref|YP_003898000.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581] gi|307217545|emb|CBV42815.1| hypothetical protein HELO_2931 [Halomonas elongata DSM 2581] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 16/253 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 130 LAMSEPGAGSDVVSMKLKAEKRGD-RYVLNGNKMWITNGPDADVLVVYAKTDPDAGSKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG++N G M L Sbjct: 189 TAFIIEKGFAGFSTAQKLDKLGMRGSNTCELVFEDCEVPEENVLGEVN--KGARVLMSGL 246 Query: 316 IYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + + + + + M+ ++ + Y R G + + +++ +AD+ + A A Sbjct: 247 DFERTVLAAGPIGIMQAAMDVVVPYLHERKQFGQSIGEFQLVQGKVADMYTTLNACRAYL 306 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + +A + D ++ ++AA + +C + A + +A++ +GG+GYI E R Sbjct: 307 YAVAGACDRGRTSRKDAAGVIL-------YCAEKATQMALDAIQLLGGNGYINEYPTGRL 359 Query: 434 YRESPANSILLGS 446 R++ I G+ Sbjct: 360 LRDAKLYEIGAGT 372 >gi|24215339|ref|NP_712820.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] gi|24196446|gb|AAN49838.1|AE011431_2 acyl-CoA dehydrogenase [Leptospira interrogans serovar Lai str. 56601] Length = 586 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/341 (21%), Positives = 140/341 (41%), Gaps = 72/341 (21%) Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 EY P M + + LTE G+D+ + ++ K +GI+ L+G K F++ Sbjct: 171 EYVP----KMANGEIFGAMALTEPNYGSDLPNLQTKAIKDENGIWKLTGTKRFITHGCGF 226 Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKN----------KIGNRSNATV 287 A I ++ L G+P GL + +K+ K+G + T Sbjct: 227 ANI----------PAVILTLARTGTPTSGARGLSFFLVKSSDVFIAGIEKKMGLHCSPTC 276 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLA-----EAIHY 338 E+ + NT G L+G+ E ++ Y ++ A +S++ + +A EA Y Sbjct: 277 EVVYENTPGILIGE--------EGYGLVRYSMAMMNGARLSIAAQAMGIATAAYMEAKKY 328 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--------- 389 A R G + + P + + ++ + +IA A+ + S D +SE Sbjct: 329 ASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKSERMRENGIEER 388 Query: 390 -----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 A + P++KY+ ++A + +A++ GG+G+ + ++R YR+ Sbjct: 389 EIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYDYDVSRIYRDVR 448 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472 +I G+ V+ + + G + FE+ FS + Sbjct: 449 ITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKI 489 >gi|307295297|ref|ZP_07575136.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306878800|gb|EFN10019.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 389 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 34/279 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ----VEGRV 253 + + ++E G+D+ + + K D Y ++G K F+S+ + I++A V G Sbjct: 129 LAVAMSEPAAGSDLQGMRTTAVKDGDE-YIINGQKTFISNGAHASLIIVAAKTDPVAGGR 187 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPV 309 G L +E G RL +K+G T EL FS D+ V G V Sbjct: 188 GISLFG--VETDKVEGFTRGRLLDKMGQEGRDTAELFFS--------DMRVPAENLLGGV 237 Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E + ++ A +++ M +L + Y R G ++D + +A+ Sbjct: 238 EGAGFAMLMEKLPQERLVIAWQAMAMMETALNLTVEYVSERKAFGKAVMDFQNTQFKLAE 297 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 AT L + ++ + + +AA A + KYW + VI E ++ GG Sbjct: 298 AK---TLATVAKVFLNHCTEQLLAGTLDAA----TASMAKYWITEAQAKVIDECLQLFGG 350 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY+ E IA Y+++ A I G+ M L + L++ Sbjct: 351 YGYMNEYPIAEMYKDARAYRIYGGANEIMKLLIARSLKQ 389 >gi|289449889|ref|YP_003474912.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184436|gb|ADC90861.1| putative butyryl-CoA dehydrogenase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 379 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 37/304 (12%) Query: 175 APKIFSREYDPTNK--APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231 P + S D K P+ + LTE G+D ++T+ + DG Y L+G Sbjct: 95 GPLLISGTKDQIQKYLLPIASGEKKVCFALTEPGAGSDPNSMTTSA--VLDGDHYVLNGR 152 Query: 232 KWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F++ +P++D ++ A+ + G + + D G+ + ++K+G AT ++ Sbjct: 153 KCFITQAPLADYAVVYARTDATKGVKGITAFVVDMKAPGVTCGKPEDKMGIIGCATSDII 212 Query: 291 FSNTFGFLLGDLNVSTGPVED---------MKILIYLDSAIMSVSGMRVSLAE-----AI 336 F D+ V PVED + + LD + V+ + +A +I Sbjct: 213 FE--------DVKV---PVEDRLGAEGMGFINAMKTLDVGRLGVAAQSIGVAGGALELSI 261 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 YA+ R G + + +A++A + AA L++ A E K R+++ A R Sbjct: 262 QYAKERKQFGKPIAKFQAISFMLAEMATKLEAARQLTYHAA----ELKDRNDKNA-GRYC 316 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 + + K + ++ + A+A++ GG G+I++ + R YR+ +I G+ + + N Sbjct: 317 S-MAKLFASEVCNEICAKAVQIHGGYGFIKDYKVERMYRDCRVFTIYEGTSQVQQIVISN 375 Query: 457 LLEK 460 L K Sbjct: 376 SLLK 379 >gi|254701832|ref|ZP_05163660.1| glutaryl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|261752390|ref|ZP_05996099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261742143|gb|EEY30069.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] Length = 394 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|254281716|ref|ZP_04956684.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium NOR51-B] gi|219677919|gb|EED34268.1| short-chain specific acyl-coa dehydrogenase [gamma proteobacterium NOR51-B] Length = 392 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 52/271 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ----VEGRVG 254 L+E G+D+AA+ + + DG + L+G K W ++ ++D + + A+ +EG G Sbjct: 132 FALSEPNAGSDVAAMECRAEAEGDG-FILNGTKTWISNAGIADFYTVFARTDPTLEGAKG 190 Query: 255 --CFLVP---------RLLEDGSPNGL-------CYQRLKNKIGNRSNATVELEFSNTFG 296 CF+VP ++ +P+ L CY K +G + F Sbjct: 191 ISCFIVPADTPGFEVSERIDLVAPHPLGTLQFTDCYLPAKQLVGEQGRG---------FA 241 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + L+V V A ++ R +L + + +R + GG L+D P+++ Sbjct: 242 IAMATLDVFRSTV-----------AAAALGMARCALDATLDHIGQRDIFGGKLVDLPLVQ 290 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + D+AL I ++ L +R A + D R + EAA A++ A + A VI A Sbjct: 291 AKVGDMALAIDSSALLVYRAAWTKDCVAERVTREAAMAKLAA-------TESAQQVIDSA 343 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG G + + YR+ A I G+ Sbjct: 344 VQLHGGKGVTKGNIVESLYRDIRALRIYEGA 374 >gi|316935219|ref|YP_004110201.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602933|gb|ADU45468.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 390 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G+K W + P+++ ++ A+ + G Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGNKMWITNGPIAETLVVYAKTDPAAG---- 185 Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 PR L+E G Q+L +K+G R + T EL F N G + +NV Sbjct: 186 PRGMTAFLIEKGFKGFSTAQKL-DKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLM 244 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ + ++ A V M+ + + Y R G + +++ +AD+ + + Sbjct: 245 SGLDYERAVL----AAGPVGIMQACMDVVMPYVHERKQFGEPIGTFQLVQGKVADMYVTM 300 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +A + D ++ E+AA A + A C +A++ +GG+GYI Sbjct: 301 NASRAYVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYIN 353 Query: 427 ERSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 354 DYPTGRLLRDAKLYEIGAGT 373 >gi|302560528|ref|ZP_07312870.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302478146|gb|EFL41239.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 386 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-K 220 V L T ++W P++ S E + GLTE GG+D A + + Sbjct: 98 VHLFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144 Query: 221 ISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271 S + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 145 ESTDEWVINGGKCFITNSGTDITGLVTVTAVTGRKPDGKPLISAIIVP----SGTP-GFT 199 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +K+G ++ T EL F + LLG+ + L LD ++++ + Sbjct: 200 VAAPYSKVGWNASDTRELSFQDVRVPAANLLGEQGRGY-----AQFLRILDEGRIAIAAL 254 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 LA E++ YA+ RH G + ++ IAD +++ A TA RLA + +A Sbjct: 255 GTGLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDA 307 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 SR + A + K + +A +A + GG G++ E +AR +R+S + Sbjct: 308 ASRLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILE 365 Query: 444 LGSGNAMVLDVLNLLEKG 461 +G G + V +L E G Sbjct: 366 IGEGTSEVQRMLIARELG 383 >gi|297194266|ref|ZP_06911664.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197720558|gb|EDY64466.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 385 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 45/274 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEG------ 251 L +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ Sbjct: 124 LAMTEPGTGSDVAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADRVIVCARTSAPREDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G L D G R +K+G R++ T EL F D+ V PVED Sbjct: 184 RFGISL---FAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PVED 229 Query: 312 M-----KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MK 356 + K YL + S G A+ +A++ +V+ + +PV K Sbjct: 230 LLGEENKGFYYLGQNLPSERWGIAFGAYAQAKAAVRFAQQ-YVTDRTVFGKPVASFQNTK 288 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A ++ AA A++ R + D + + EAA A++ +C ++A VI + Sbjct: 289 FELAACQAEVDAAEAVADRALEALDAGELTAAEAASAKL-------FCTEVAHRVIDRCL 341 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + GG GY+ E IAR Y ++ N I G+ M Sbjct: 342 QLHGGYGYMNEYPIARLYADNRVNRIYGGTSEVM 375 >gi|111020337|ref|YP_703309.1| butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819867|gb|ABG95151.1| probable butyryl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 383 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 39/308 (12%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + + P++ + E T + LTE GG+D+ Sbjct: 86 MGGHTVVAKLLSLYGTEEQKRQYLPQMATGEIRAT-------------MALTEPGGGSDL 132 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRLLEDG 265 A+++ + D + +SG K ++S+ I L G +V L+E G Sbjct: 133 QAMSTNAKTDGDDL-VISGSKTWISNARRSGLIALLCKTDPGASPKHKGISIV--LVEHG 189 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDS 320 GL R K+G + T EL F N + +LG G + MK L + Sbjct: 190 P--GLTVSRDLPKLGYKGVETCELSFDNYRISSDAVLGG-TPGKGFAQMMKGLETGRIQV 246 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 A ++ +L +++ YA++R G + + +AD+A + AA L++ A + Sbjct: 247 ACRALGVATAALEDSLAYAQQRESFGKPIWKHQSIGNYLADMATKLTAARQLTWHAAEQY 306 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D EA A++ A ++A + A+ GG GY E + R++R++P Sbjct: 307 DSGDRCDMEAGMAKLYA-------SEVAMDIALNAVRIHGGYGYSTEYDVERYFRDAPL- 358 Query: 441 SILLGSGN 448 +++G G Sbjct: 359 -MIVGEGT 365 >gi|163848214|ref|YP_001636258.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526122|ref|YP_002570593.1| acyl-CoA dehydrogenase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669503|gb|ABY35869.1| acyl-CoA dehydrogenase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450001|gb|ACM54267.1| acyl-CoA dehydrogenase domain protein [Chloroflexus sp. Y-400-fl] Length = 417 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE GTD AA+ + ++ + Y L+G K W + ++D F++ A+ + G + Sbjct: 140 LTEPNSGTDAAAMQATARRDGED-YILNGEKIWISLADLADNFLVFAKTDPGAGPRGITA 198 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-----PVEDMKI- 314 + + S G+ + K+G R+ NT G + D+ V E KI Sbjct: 199 FIVERSMPGVSSYPIHGKLGVRA--------GNTGGVVFNDVRVPRSHRLGEEGEGFKIA 250 Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD+ +V+ ++ SL +I YAR R G + + ++KR I+ + + + Sbjct: 251 MAALDNGRYTVAAGATGLIQASLEASIRYARERQTFGVPIAEHQLVKRMISHMVRKLDTS 310 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R ++ + E A+ A ++ + +A++ G GY +E Sbjct: 311 RLLVYRAGWMKNKGIRNTRETTLAKWHATVSSFEAAD-------DAIQIHGAYGYADEYP 363 Query: 430 IARHYRESPANSILLGS 446 + R+ R + I G+ Sbjct: 364 VERYLRNARGAIIYEGT 380 >gi|332851736|ref|ZP_08433661.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332865889|ref|ZP_08436669.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332729743|gb|EGJ61078.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332734939|gb|EGJ66025.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] Length = 430 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 18/219 (8%) Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y + G K + ++D F++ A G+ F+V + G + + +G ++ Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAA 275 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 T L+FS+T LG + D+ L++ A+ + ++ A I YA R Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + IAD+A++I A L A+ +E K EA ARI+ C Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEEGKPFHREAYLARIL-------C 385 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424 >gi|257067267|ref|YP_003153522.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810] gi|256558085|gb|ACU83932.1| butyryl-CoA dehydrogenase [Brachybacterium faecium DSM 4810] Length = 418 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 51/265 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLA---QVEGRV 253 GLTE G+D A T ++ DG + + G K F++ +P++ + A Q +GR Sbjct: 149 FGLTEAEAGSD-AGGTRTTARLEDGQWVIDGTKQFITNSGTPITSLVTITAVTGQRQGRD 207 Query: 254 G-------CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 G +VP +P G +K+G + S+T LL + V Sbjct: 208 GRSSPELSSIIVP----TDTP-GFTVLPGYDKVGWHT--------SDTHPLLLEGVRV-- 252 Query: 307 GPVEDM---------KILIYLDS-----AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 P E++ L LD A + V + L +A+ YAR R V G L + Sbjct: 253 -PEENLLGERGRGFANFLAILDQGRVALAALCVGAAQGCLEQAVRYARERVVFGRALGEN 311 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 + +A + +A+A AL A+ D S EA+ A+++ + A A Sbjct: 312 QHIAFTLARMQARVASARALMHEAAHRLDAGMPFSREASLAKLVG-------SEAAVANA 364 Query: 413 AEAMECIGGSGYIEERSIARHYRES 437 +A + GG+G++ E +ARHYR+S Sbjct: 365 RDACQIWGGNGFLNENVVARHYRDS 389 >gi|45657228|ref|YP_001314.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600466|gb|AAS69951.1| acyl-CoA dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 586 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/341 (21%), Positives = 140/341 (41%), Gaps = 72/341 (21%) Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD 241 EY P M + + LTE G+D+ + ++ K +GI+ L+G K F++ Sbjct: 171 EYVP----KMANGEIFGAMALTEPNYGSDLPNLQTKAIKDENGIWKLTGTKRFITHGCGF 226 Query: 242 AFIMLAQVEGRVGCFLVPRLLEDGSPN----GLCYQRLKN----------KIGNRSNATV 287 A I ++ L G+P GL + +K+ K+G + T Sbjct: 227 ANI----------PAVILTLARTGTPTSGARGLSFFLVKSSDVFIAGIEKKMGLHCSPTC 276 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILIY----LDSAIMSVSGMRVSLA-----EAIHY 338 E+ + NT G L+G+ E ++ Y ++ A +S++ + +A EA Y Sbjct: 277 EVVYENTPGILIGE--------EGYGLVRYSMAMMNGARLSIAAQAMGIATAAYMEAKKY 328 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE--------- 389 A R G + + P + + ++ + +IA A+ + S D +SE Sbjct: 329 ASEREQFGKKIQNIPAVHKMLSFMDREIAGMRAILLEASRSIDLYHWKSERMRENGIEER 388 Query: 390 -----------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 A + P++KY+ ++A + +A++ GG+G+ + ++R YR+ Sbjct: 389 EIKKDETIRKWEKLANLFTPLSKYYITELANKIAYDALQIHGGAGFTYDYDVSRIYRDVR 448 Query: 439 ANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472 +I G+ V+ + + G + FE+ FS + Sbjct: 449 ITNIYEGTTQLQVVAAIGGIVSGMSPKGHLRQYFEEEFSKI 489 >gi|254241359|ref|ZP_04934681.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192] gi|126194737|gb|EAZ58800.1| hypothetical protein PA2G_02054 [Pseudomonas aeruginosa 2192] Length = 393 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 15/255 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-FL 257 L ++E G+D+ ++ + +K D Y L+G+K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGNKMWITNGPDCDILVVYAKTDLAAGAKGM 187 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +LE +P Q+L +K+G R + T EL F + + NV E +K+L+ Sbjct: 188 TAFILETNTPGFSVAQKL-DKLGMRGSHTGELVFQDV---EVPAENVLGQVGEGVKVLMS 243 Query: 318 -LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD +SG + L +A + Y R G + + +++ +AD+ + A+ A Sbjct: 244 GLDYERAVLSGGPLGLMQAAMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQASRA 303 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + + D A+ + A + Y + A + EA++ +GG+GYI E ++ Sbjct: 304 YLYSVGKHLD-AQGTDHVRQVRKDCAGVILY-AAEKATWLAGEAIQILGGNGYINEFAVG 361 Query: 432 RHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 362 RLWRDAKLYEIGAGT 376 >gi|301630321|ref|XP_002944270.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 398 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K++ G Y L G K W + Sbjct: 114 FGTEAQKQKYLPGLASGALIGCFGLTEPDHGSDPGSMAARATKVAGG-YRLKGSKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 173 SPVADVFVVWAKEVSEGGAVGPIRGFVLEKGW-KGLAAPAIHGKVGLRTSITGEIVMDDV 231 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F +++ GP L+SA ++ + AE A Y R G Sbjct: 232 FVPEENAFPEVHGLKGP------FTCLNSARYGIAWGAMGAAEFCWHTARQYTLERQQFG 285 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +IA + R DE + E + + K C Sbjct: 286 RPLAANQLVQKKLADMQTEIALGLQAALRFGRMKDEGIAAVEGTS-------LIKRNNCG 338 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 339 KALDIARLARDMLGGNGISDEFGVARH 365 >gi|288960856|ref|YP_003451196.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] gi|288913164|dbj|BAI74652.1| acyl-CoA dehydrogenase [Azospirillum sp. B510] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 121/264 (45%), Gaps = 27/264 (10%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGR-- 252 + + +TE G+D+A++ ++ + D + L+G K ++S+ + +DA ++ A+ + R Sbjct: 124 LAVAMTEPGAGSDLASMRTRAEDRGDH-WLLNGSKTYISNGLLADAVVVAARTVPDSRHG 182 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 +G F+V R +E S G + K+G + T EL F N + NV P Sbjct: 183 IGLFIVERGMEGFSRGGRFH-----KMGLHAQDTAELFFDNV---RVPKANVLGDPTRGF 234 Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +L + L +A+ S++ +V+ + Y + RH G + + +A++ + Sbjct: 235 HLLAHGLAEERLIAAVGSIAHAQVAFDLTLDYVKERHAFGRPIGTFQNSRFKLAEMRAQL 294 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + + + E AA A+++ ++ V + ++ GG+GY+E Sbjct: 295 DAAQTFVDQCVLEHNAGRLTGETAAAAKLI-------TSELEGRVADDCVQLHGGAGYME 347 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 E I+R Y ++ I GS M Sbjct: 348 EYRISRIYTDARITRIFAGSSEIM 371 >gi|126736656|ref|ZP_01752395.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] gi|126713771|gb|EBA10643.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ +++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMSLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G +K+G R + T EL F + F +LG+ + +++L Sbjct: 187 TAFLIEKEMTGFSTSPHFDKLGMRGSNTAELVFDDVQVPFDNVLGEEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++G M L E + Y R G + + +M+ IAD+ + +A Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEVMPYISTRKQFGEPIGNFQLMQGKIADMYTAMNSA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 301 RAYVYEVAKACDRGTVTRQDAAA-----------CCLYASEEAMKQAHQAVQAMGGAGFL 349 Query: 426 EERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 350 NDAPVARIFRDAKLMEIGAGT 370 >gi|85374667|ref|YP_458729.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter litoralis HTCC2594] gi|84787750|gb|ABC63932.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter litoralis HTCC2594] Length = 391 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 26/265 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A + + +K DG Y +SG K W + Sbjct: 112 FGSEEQKRKYLPGLASGELIGCFGLTEPDAGSDPAGMKTVAKKNGDG-YIISGSKTWISN 170 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT---VELEFSN 293 SP +D F++ A+ E G + +LE G +GL +++ KI R++ T V E Sbjct: 171 SPFADVFVVWAKSE-EHGGGIRGFVLEKGM-DGLSAPKIEGKISLRASTTGMIVMDEVKV 228 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGI 348 LL D+ GP L+ A +S + AE +H AR+ R G Sbjct: 229 GADALLPDVQGLKGPFS------CLNRARYGISWGSMGAAEFCMHAARQYGLDRQQFGVP 282 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 L + + + ++++ +IA S R+ DE K +A M I K A Sbjct: 283 LASKQLYQLKLSNMMSEIALGLQASLRVGRLMDEGK-------FAPEMISIVKRNNVGKA 335 Query: 409 PAVIAEAMECIGGSGYIEERSIARH 433 + A + GG+G EE + RH Sbjct: 336 LDIARAARDMHGGNGISEEYQVIRH 360 >gi|317126242|ref|YP_004100354.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315590330|gb|ADU49627.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 34/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPR 260 TE G+D A I + + D + ++G K F+S +D I+ A G V Sbjct: 123 FTEPDAGSDFARIKTSAVRDGDE-WVINGRKTFISHVDRADFLILFASTNPGAGSRGVTC 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------------TFGFLLGDLNVSTGP 308 L D G R +G+ + EL F N GF + D ++ G Sbjct: 182 FLVDKDTPGFEVSRPIPTMGD-AWTPYELTFENCRVPHENVLGEVDKGFAIADHQLTHGR 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 V +I Y + + SL AI +A++R G + + ++ IAD +++ A Sbjct: 241 V---RIAAY------QLGMAQRSLDLAIEWAKQRTTWGKPIATRQAIQWMIADSYVELEA 291 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L ++ A ++D+ R+E A K + +MA V ++ GG GY +E Sbjct: 292 ARLLVYKAAMTYDKEGGRNEAFA--------AKLYATEMAQRVTDRCLQIFGGLGYTKEL 343 Query: 429 SIARHYRESPANSILLGSGNAMV 451 I YR+ I G G A V Sbjct: 344 PIQSFYRQIRVWRI--GHGTAEV 364 >gi|118619775|ref|YP_908107.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99] gi|118571885|gb|ABL06636.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium ulcerans Agy99] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 24/265 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D + ++G K +++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVREGDH-FIVNGAKTYITSGVRADFVVTAVRTGGPGAGGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFVVSRKLDKMGWRSSDTAELSYTDARIPAANLVGAENSGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIA---AAT 370 + A + S + L + + R R G LI + ++ +A++A +D+A + + Sbjct: 242 ERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRS 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +LA D + +A+ A W V +A++ GG GY+ E I Sbjct: 302 VVERQLAGEHDLIP----QVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEI 350 Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455 R YR+ + +G G +L L Sbjct: 351 ERQYRD--MRILGIGGGTTEILTAL 373 >gi|320450375|ref|YP_004202471.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320150544|gb|ADW21922.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] Length = 409 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA+ ++ + D Y L+G K W + ++ ++ A Sbjct: 142 PLTEKPALAAFALSEPGNGSDAAALKTRAVRQGD-YYILNGTKMWISNGGEAEWVVVFAT 200 Query: 249 VEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294 + + +V ++E G+P G ++ K+G R++ T EL F Sbjct: 201 LNPELRHKGVVALVVEKGTP-GFSAVKIHGKMGQRASGTYELVFEEVKVPVQNRLGEEGE 259 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 F + LN + PV A SV R +L EA YA+ R G + Sbjct: 260 GFKIAMNTLNKTRIPV-----------AAGSVGVARRALDEAKKYAKEREAFGQPIASFQ 308 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+ + I A ++ A D+ + +A I K + ++A Sbjct: 309 AIQFKLADMMIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 361 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY+ E + + R+ N I G+ Sbjct: 362 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 394 >gi|302388245|ref|YP_003824067.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum WM1] gi|302198873|gb|ADL06444.1| acyl-CoA dehydrogenase domain protein [Clostridium saccharolyticum WM1] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD A + D Y L+G K F+++ +D +I+ A + ++G + Sbjct: 123 FGLTEPNAGTDAAMQATTASDEGDH-YLLNGSKIFITNGSYADVYIIFAVTDKKLGKKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G + ++K+G R +AT EL F N + N+ + KI + Sbjct: 182 SAFILEKGMEGFTFGSKEHKMGIRGSATYELVFDNV---KVPKENLLGEAGKGFKIAMAT 238 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372 LD + ++ + +A+ A +V I +P+ + +AD+ + AA L Sbjct: 239 LDGGRIGIAAQALGIAQGAIDAAAAYVKERIQFGKPISAFQNTQFTLADMQTRVDAARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + + +A+ A++ + + A V ++A++ GG GY E + R Sbjct: 299 VYRAACMKTAGEKYTAQASMAKL-------YASETAGYVTSKAVQLFGGYGYTREYPVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKITEIYGGT 365 >gi|254524492|ref|ZP_05136547.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14] gi|219722083|gb|EED40608.1| glutaryl CoA dehydrogenase [Stenotrophomonas sp. SKA14] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 30/244 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GLTE GG+D ++ + + + DG + +SG K W S P++D I+ AQ E + F Sbjct: 133 FGLTEAHGGSDPGSMKT--RAVRDGSDWRISGSKMWITSGPVADLAIVWAQTEDGIQGF- 189 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 +LE G G Q +K+K+ R++ T L F + L ++ GP Sbjct: 190 ---VLEKGMA-GFTTQEIKHKMSLRASLTGALFFDDVRVPDSHRLPNVKGLKGP------ 239 Query: 315 LIYLDSAIMSVS----GMRVS-LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L A +S G ++ L EA+ YA+ R + G L + +A++A I A Sbjct: 240 LGCLTQARFGISWGPIGAAIACLDEALGYAKERVLFGRPLAATQSAQIKLAEMARRITTA 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+ +L + + + ++ + A K+ C+MA + E + +GG+G E Sbjct: 300 QLLALQLGRLKEAGQLQPQQVSLA-------KWNNCRMAIDIARECRDLLGGAGITTEHV 352 Query: 430 IARH 433 RH Sbjct: 353 AIRH 356 >gi|195358362|ref|XP_002045199.1| GM16092 [Drosophila sechellia] gi|194122553|gb|EDW44596.1| GM16092 [Drosophila sechellia] Length = 357 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 24/209 (11%) Query: 252 RVGCFLV--PRLLED-GSPNGLCYQRL-----KNKIGNRSNATVELEFSNTFGFLLGDLN 303 RVGCF + P D G+ + + R ++K+G R ++T +L F + ++ N Sbjct: 141 RVGCFALSEPGNGSDAGAASTIATDRADHFVKEDKLGIRGSSTCQLIFEDC---VVPKEN 197 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 + P KI + LD+ + ++ + + +A + YA++R G + +++ Sbjct: 198 MLGEPGFGFKIAMQTLDAGRIGIASQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQ 257 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IAD++L + +A L++R A D+ + ++EAA A++ A C + ++ Sbjct: 258 KIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSH-------QCIQ 310 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 +GG GY+ + + RHYR++ I G+ Sbjct: 311 ILGGMGYVTDMAAERHYRDARITEIYEGT 339 >gi|153837598|ref|ZP_01990265.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] gi|149749095|gb|EDM59906.1| acyl-CoA dehydrogenase [Vibrio parahaemolyticus AQ3810] Length = 389 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + S G + +K+G R + T EL F+N +LG LN VE + Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ +AD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + ++A + +A++ +GG+GYI E + R Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|86360114|ref|YP_472003.1| acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] gi|86284216|gb|ABC93276.1| probable acyl-CoA dehydrogenase protein [Rhizobium etli CFN 42] Length = 375 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 28/262 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + ++ ++ D Y + G K F++S + I++ + G+ G Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGD-YYVIDGAKQFITSGKNGNVIIVFAITDPDAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP G R++ K+G S T ++ F+ + DL + E Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSTDTCQIAFNAMR--IPADLRLGA-EGEGY 230 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDI 366 +I L L+ + ++ V +A A YAR R G + + + +AD+A+ I Sbjct: 231 RIALANLEGGRIGIAAQAVGMARAAFEASRDYARERTAFGKPIFEHQAVAFRLADMAVRI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L F A+ + EA+ A++ A +MA V ++A++ GG GY+ Sbjct: 291 EAARQLVFHAASLREAGLPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYMA 343 Query: 427 ERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 344 DYPVERIYRDVRICQIYEGTSD 365 >gi|298290808|ref|YP_003692747.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506] gi|296927319|gb|ADH88128.1| acyl-CoA dehydrogenase domain protein [Starkeya novella DSM 506] Length = 412 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 26/254 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A + ++ +KI DG Y L+G K W +SP++D ++ A Sbjct: 143 PKLATGEWIGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLTGSKMWITNSPIADVAVVWA 201 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 + + + FLV R G +++NK+ R++ T E+ G + + ++ Sbjct: 202 KSAAHDNDIRGFLVER-----GAKGFSTPKIENKLSLRASITGEIVLD---GVEVPEESL 253 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAI 359 G L+ A + + AEA + + R R G L ++++ + Sbjct: 254 LPGASGLKGPFGCLNRARFGIGWGTIGAAEACYASARQYTLDRKQFGKPLAATQLIQKKL 313 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A +IA L+ R FDE + E + + K C A + A + Sbjct: 314 ADMATEIALGLQLALRAGRLFDEGQLPVEAIS-------MLKRNNCGKALDIARLARDMH 366 Query: 420 GGSGYIEERSIARH 433 GG+G E + RH Sbjct: 367 GGNGISAEFPVMRH 380 >gi|83815178|ref|YP_445851.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855] gi|83756572|gb|ABC44685.1| acyl-CoA dehydrogenase [Salinibacter ruber DSM 13855] Length = 735 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 38/308 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------------Q 248 L+E G+D AA S K DG Y L+G K W S MS ++ + Sbjct: 209 LSEPNVGSDAAAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELE 268 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + P + DG +++ + K G R F++ + + NV Sbjct: 269 QQGVNALIVTPDM--DGVE---VFEKNRAKTGIRGTWQARFRFNDV---RVPEENVLHEE 320 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +K+ L L+ ++S A+A I +A+ R+ L D ++K+ IA + Sbjct: 321 GAGLKVALSCLNYGRCTLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARM 380 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + A A+ + + D+ + + ITK +C VI EA++ +GG Sbjct: 381 SAVTYAMDAMLYMMTGLLDQGEDD------IMVETAITKVFCSDFGWNVIDEALQVMGGE 434 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLG 477 GY+ E + R +R++ + I+ GS M + L EK ++ E L ++ +G Sbjct: 435 GYMTEHELERAWRDNRIHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIG 494 Query: 478 SSGKKVIT 485 + +++T Sbjct: 495 DNLSRILT 502 >gi|329890061|ref|ZP_08268404.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] gi|328845362|gb|EGF94926.1| isobutyryl-CoA dehydrogenase [Brevundimonas diminuta ATCC 11568] Length = 379 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 20/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ + + D Y L+G K F+S + SD ++++ + G + Sbjct: 124 LTEPGSGSDAAALRTTAVRDGD-HYVLNGAKAFISGAGTSDVYVVMVRTGGEGPKGISTI 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 ++E G+P GL + + K+G + T + F +N G + ++ + Sbjct: 183 VVEAGTP-GLSFGANEKKMGWNAQPTAVVSFDDCRVPVANLVGEEGAGFKYAMAGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G R++L A Y R G + + +AD+A D+ AA + Sbjct: 242 LNI----AACSLGGARLALETAQEYVAGRKQFGQAIGQFQNTQFELADMATDLEAARLMV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 R A + D E+ + + +T C ++A +A++ GG GY+++ + R Sbjct: 298 LRGAWAID--TGHPEKTKWCAMAKRLTTDACFQIAD----QALQLHGGYGYLKDYPLERI 351 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ + IL G+ M + V L +G Sbjct: 352 VRDLRVHRILEGTNEIMRVIVARELARG 379 >gi|209515548|ref|ZP_03264413.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209504015|gb|EEA04006.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 29/278 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGR--- 252 L +TE + G+D++ I + ++ +G Y L+G K W +S ++D ++ A+ EG+ Sbjct: 121 LSITEAQSGSDVSGIRTTARR-KNGGYVLNGSKIWCTNSHIADFILVAAKTLDEEGQPLG 179 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 V F+V R +P GL ++K+G R A+ L F + F L G + Sbjct: 180 VNLFIVDR----NTP-GLTIGNEEDKMGARGVASCPLYFDDAFIRTEDRLGPEGG--QGF 232 Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + L+++ V+ V +A+ + + + R G + + ++ IAD+ Sbjct: 233 KVAMEALNTSRPIVAARAVGIAQGAIDHTVKFIQDRVAFGQTISNFQGVRWMIADMVTQT 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A+ D A R E A +A + K + +A V +A++ G +G Sbjct: 293 EAARQLVYRTASLVD-AGVRGRELAP---IAAMAKMFASDVAMKVATDAVQLFGAAGISN 348 Query: 427 ERSIARHYRESPANSILLGSG----NAMVLDVLNLLEK 460 E I R++R++ I+ G+ N + +VL ++K Sbjct: 349 EYPINRYFRDAKVVQIIEGTNQIQRNIVADNVLGRIKK 386 >gi|47522692|ref|NP_999062.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Sus scrofa] gi|2829676|sp|P79274|ACADL_PIG RecName: Full=Long-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=LCAD; Flags: Precursor gi|1695729|dbj|BAA13965.1| long-chain acyl-CoA dehydrogenase [Sus scrofa] Length = 430 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 29/275 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P IG + +TE G+D+ + + +K DG + L+G K F+++ +SD I++ Sbjct: 159 PQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKK--DGSDWILNGSKVFITNGWLSDVVIVV 216 Query: 247 AQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 A E R + L + G R +KIG ++ T EL F + LLG+ Sbjct: 217 AVTNREARSPAHGISLFLVENGMKGFVKGRKLHKIGLKAQDTAELFFEDVRLPASALLGE 276 Query: 302 LN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 N + P E + I A ++VS E +Y ++R G + + Sbjct: 277 ENKGFYYLMQELPQERLLI------AELAVSASEFMFEETRNYVKQRKAFGKTVAHIQTV 330 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + +A++ I A D E A + KYW ++ +V + Sbjct: 331 QHKLAELKTHICVTRAF-------VDSCLQLHETKRLESAAASMAKYWASELQNSVAYDC 383 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR Y ++ I G+ M Sbjct: 384 VQLHGGWGYMWEYPIARAYVDARVQPIYGGTNEIM 418 >gi|332525953|ref|ZP_08402094.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332109504|gb|EGJ10427.1| butyryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 594 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/387 (21%), Positives = 159/387 (41%), Gaps = 71/387 (18%) Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207 AG+ M + +A+++A TP + +A ++F+ E+ T + L+E + Sbjct: 121 AGYAML-TTGNANLIAAHGTPAQRETFARRLFAGEWFGT-------------MCLSEPQA 166 Query: 208 GTDIAAITSQGQKISDG--------IYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVG 254 G+ ++ + ++ + G Y L GHK ++S + ++LA++ G Sbjct: 167 GSSLSDVATRAEPDGPGHEADALGPRYRLRGHKMWISGGEHELAANIVHLVLAKIPDETG 226 Query: 255 ----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--- 296 F+ P+ L G N + L +K+G R L F G Sbjct: 227 RLPPGVKGLSLFICPKFLPGPDGRLGRRNDVALAGLNHKLGYRGTTNTLLNFGERDGAVA 286 Query: 297 FLLG----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS---GGIL 349 +L+G L + + +I + L + ++ +G SL YAR+R G Sbjct: 287 WLVGRPGDGLRCMFHMMNEARIAVGLGAVMLGWAGYEASL----EYARQRPQGRPLGAKD 342 Query: 350 IDQPVM--------KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-AR----IM 396 QP + +R + + ALS A DEA++ + EAA AR ++ Sbjct: 343 ATQPQVPILRHVDVRRMLLAQKSYVEGGLALSLYCARLVDEARTGAPEAAADARRLLDLL 402 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 PI K W + + A++ +GG GY + + +++R++ N I G+ LD+L Sbjct: 403 TPIAKSWPSEWCLEANSLAIQVLGGCGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLG 462 Query: 457 --LLEKGTNLFEQLFSTLEQDLGSSGK 481 +L G + L + ++ +G+ Sbjct: 463 RKVLADGGAALKLLVTRIDATAQRAGQ 489 >gi|319781710|ref|YP_004141186.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167598|gb|ADV11136.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 398 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 23/243 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ +K ++G Y LSG K W ++P++D F++ A+++G G + Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTANG-YKLSGSKMWISNAPVADVFVVWAKLKGENGKDEI 196 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + GL ++ K+ R++ T E+ LL + GP Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 251 GCLNRARFGISWGSMGAAEDCWHRARQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGL 310 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ DE K E M I K C A + +A + GG+G + Sbjct: 311 QASLRVGRLLDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363 Query: 431 ARH 433 RH Sbjct: 364 MRH 366 >gi|288555266|ref|YP_003427201.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288546426|gb|ADC50309.1| butyryl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 381 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQ 248 P+ + GLTE G+D +Q + + DG Y ++G K ++++ +++ Sbjct: 113 PLAQGQSLGSFGLTEPNAGSDAGG--TQTKAVLDGDEYVINGEKCWITNASYARTVIVTA 170 Query: 249 VEGR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 V G+ G + L+ G K+G R++ T EL + LLGD Sbjct: 171 VTGKDERGKNITSALIVPTDAPGFTINSNYEKMGVRASNTCELVLEDVRVPKENLLGD-- 228 Query: 304 VSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKR 357 P K +Y LD +S++ + V +A+A + Y++ R G + ++ Sbjct: 229 ----PQGGFKQFLYTLDGGRISIAALGVGIAQAAFERALAYSKERKQFGKTISSFQAIQF 284 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+A++I A + + A D+ ++ +EAA+A++ A T A +A++ Sbjct: 285 KLADMAMEIELARNMVMKAAWLKDQNRAFGKEAAFAKLYASET-------ATRTANQAIQ 337 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG GY+ E + R R+ A + +G G + + Sbjct: 338 IHGGYGYMREYEVERMLRD--AKLLEIGEGTSEI 369 >gi|261323300|ref|ZP_05962497.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261299280|gb|EEY02777.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] Length = 376 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE + G+D +A+ ++ + D Y + G K F++S S+ I+ A + G Sbjct: 121 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNSNVAIVFAVTDPAAGKKG 179 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 180 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 234 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 235 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 291 IETARQMVLHAAALREAGKPCLTEASMAKLVA-------SEMAEQVCSAAIQIHGGYGYL 343 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 344 ADYPVERIYRDVRVCQIYEGTSDVQRL 370 >gi|296214195|ref|XP_002753594.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Callithrix jacchus] Length = 423 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|282883257|ref|ZP_06291855.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B] gi|300814305|ref|ZP_07094577.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281296887|gb|EFA89385.1| butyryl-CoA dehydrogenase [Peptoniphilus lacrimalis 315-B] gi|300511572|gb|EFK38800.1| butyryl-CoA dehydrogenase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS---DGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG 254 GLTE GTD + GQK + DG Y L+G K F+++ +D F+++A + G Sbjct: 123 FGLTEPGAGTD-----ASGQKTTAVLDGDEYVLNGSKIFITNGGFADVFVVIAVTDKTKG 177 Query: 255 CFLVPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 + ++E G+P G ++K+G R ++T EL F D + P E++ Sbjct: 178 YKGISAFIVEKGTP-GFSVGEPEDKMGIRGSSTCELIFE--------DCRI---PKENLL 225 Query: 314 ---------ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAI 359 L LD + ++ + +AE + Y + R G + + + Sbjct: 226 GREGKGYTLALKTLDGGRIGIASQALGIAEGAIDETVKYVKERKQFGKRISQFQNTQFQL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ AA L +R A++ K EE + MA K + + A V ++ Sbjct: 286 ADMQTKTDAAQLLVYRAAST----KGNGEEYMHQAAMA---KLFAAENASDVTRRCLQLF 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 GG GY + I R R++ I G+ M + V N + Sbjct: 339 GGYGYTRDYPIERMMRDAKITEIYEGTSEVMRMVVSNWM 377 >gi|119471972|ref|ZP_01614257.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium TW-7] gi|119445230|gb|EAW26521.1| Acyl-CoA dehydrogenase family protein [Alteromonadales bacterium TW-7] Length = 385 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 26/260 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A++ ++ + D Y ++G K F+S + ++ +++A+ G + F Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEVLVVMARTGGEGAAGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP G+ Y + + K+G + T + F + + N+ E K + Sbjct: 183 VVP-----ADAQGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAHNLLGAEGEGFKFAM 234 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ + +L A Y + R G L ++ IAD+ ++ AA Sbjct: 235 QGLDGGRINIATCSIGTAQAALNTAREYLKERSQFGKPLAAFQALQFKIADMNTELVAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + RLA +F SE+ Y + K + + V EA++ GG GYI+E + Sbjct: 295 QM-VRLA-AFKLDTGDSEKTTYC----AMAKRFATDVGFTVCNEALQIHGGYGYIKEYPL 348 Query: 431 ARHYRESPANSILLGSGNAM 450 RH R+ + IL G+ M Sbjct: 349 ERHVRDVRVHQILEGTNEIM 368 >gi|66805817|ref|XP_636630.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4] gi|74852534|sp|Q54IM8|ACAD8_DICDI RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName: Full=Acyl-CoA dehydrogenase family member 8 homolog; Flags: Precursor gi|60465018|gb|EAL63127.1| acyl-CoA dehydrogenase [Dictyostelium discoideum AX4] Length = 416 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 60/393 (15%) Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148 P E+WDK E+ P ++R + G I+ VR+ +RL +EA Sbjct: 60 PFAEKWDKEEYFP--RDVMREAAELGFG-GIY-------VREDVGGSGLSRLDASIIIEA 109 Query: 149 GHLMSPSVTS----------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 L S V++ A ++ + T K + P + S M+K + Sbjct: 110 --LASADVSTTAFISIHNMCAGLIDIYGTEEQRKKFLPSLVS----------MEKIASYC 157 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D +++++ K D Y L+G K F+S D+ + L V R G Sbjct: 158 ---LTEPGSGSDAGSLSTKATKDGDH-YILNGSKAFISGG-GDSEVYLVMV--RTGAEKG 210 Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L+E +P GL + + + K+G + T L F + +G+L G + Sbjct: 211 PKGISCLLVEKDTP-GLSFGKKEEKLGWNTQPTRALIFEDCR-VPVGNLIGKEG--QGFS 266 Query: 314 ILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIA 367 I + L+ +++ + A++ A R HV +QP+ ++ +AD+A + Sbjct: 267 IAMNALNGGRINIGACSLGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLH 326 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + R A + +AK S A + + K + C V ++++ GG GY+++ Sbjct: 327 ASRIM-IRNAAAMLDAKDPS-----AHVYIAMAKLFACDECFKVTDDSLQLFGGYGYLKD 380 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R+ R+ + IL GS M L + L K Sbjct: 381 YPVERYLRDLRVHRILEGSDAVMRLIISRELSK 413 >gi|294499119|ref|YP_003562819.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] gi|294349056|gb|ADE69385.1| acyl-CoA dehydrogenase [Bacillus megaterium QM B1551] Length = 592 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 44/306 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219 + T + + PK+ S EY IG LTE G+D +AA T Sbjct: 122 ITYFGTKEQKEKYLPKLASGEY--------------IGAYCLTEPEAGSDALAAQTKAVL 167 Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKN 277 Y L+G K +++ + SD FI A+V+G F+V + E GL + Sbjct: 168 NPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEHFTAFIVEKGFE-----GLSLGPEEK 222 Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRV 330 K+G + ++T + + + +LG V G + + +L L SA M + Sbjct: 223 KMGIKGSSTRPVIYEDCLVPVENVLG--QVGKGHLIALNVLNLGRFNLGSACMGAAKYAF 280 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 LA A Y + R + + K IA +A I A+ ++ +R A +EA E+ Sbjct: 281 ELALA--YTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEEALGGLYES 338 Query: 391 AYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 +++A + K + + + EA++ GG+G+I+E I + YR+S N Sbjct: 339 ENHKLVAKQLAEFAMECSVCKVYGSETLDLIADEALQLHGGAGFIQEYKIEQVYRDSRIN 398 Query: 441 SILLGS 446 I G+ Sbjct: 399 RIFEGT 404 >gi|295691104|ref|YP_003594797.1| butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756] gi|295433007|gb|ADG12179.1| Butyryl-CoA dehydrogenase [Caulobacter segnis ATCC 21756] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 42/276 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W P + S E V LTE G+D A+ ++ D Y L+G K Sbjct: 109 WLPGVASGE-------------VITSFALTEPEAGSDSGAVQTRATLDGDA-YVLNGSKR 154 Query: 234 FLSSP-MSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 ++++ + F ++A+ G V FLVPR L GL + + K+G + Sbjct: 155 YITNAGKASLFTVMARTNPDVKGGGGVSAFLVPRDLP-----GLSVSKPEKKMGQQGAHI 209 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYAR 340 ++ F N + L E K+ + LD + ++ + V +AE + YA Sbjct: 210 HDVTFDNVRVPVENRLGAEG---EGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYAS 266 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + + +++ IAD + AA AL A D + EAA + Sbjct: 267 ERKQFGQPIANFQLIQAMIADSKTEALAARALVLETARKRDAGVGVTLEAAA-------S 319 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 K + +M V A++ GG+GY+ + I R YR+ Sbjct: 320 KLFASEMVGKVADRAVQIFGGAGYVADYGIERLYRD 355 >gi|226308408|ref|YP_002768368.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187525|dbj|BAH35629.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 385 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 48/283 (16%) Query: 195 SVAIG-----LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML-- 246 S+A G + +TE G+D+A I + + DG Y L+G K F++ ++ ++ Sbjct: 114 SIATGEKTLCIAMTEPGTGSDLAGIRTTAKLSDDGTHYILNGAKTFITGAVNSELCVVVA 173 Query: 247 -----AQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 A+ + R G L+ ++ +P G Y R K+G R++ T EL F+ D Sbjct: 174 RTSAPAEDDRRFGLSLM--VVPTDAP-GFEYGRKLEKLGLRASDTSELSFT--------D 222 Query: 302 LNVSTGPVEDM-----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGG 347 + V PV D+ K YL + V+ R ++ A Y + R V G Sbjct: 223 VKV---PVADLLGEQDKGFSYLGQNLPRERLSIGSRGVASARAAIEFAKAYVQERQVFGK 279 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 + K +A+ + ++ AA AL+ R D + + +AA RI K + ++ Sbjct: 280 PVAAFQNTKFVLAECSAEVEAAQALADRGIELDDSGELTAADAA--RI-----KLFGTEV 332 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A VI + ++ GG GY+ E IAR Y ++ + I G+ M Sbjct: 333 AARVIDKCLQLHGGYGYMLEYPIARLYADTRVSRIYGGTSEVM 375 >gi|295836976|ref|ZP_06823909.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|197697435|gb|EDY44368.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 21/266 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D A + ++ + D + L+G K W ++ +SD + ++A Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGDS-WVLNGVKRWITNAGVSDFYTVMAV 174 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305 + + + + S G+ + + K+G + + T E+ F N + D + Sbjct: 175 TDPAKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 232 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 TG MK LD ++++ + +A+ A Y + R G + D ++ +A Sbjct: 233 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ I+AA AL+++ A A R + A + K + +A V +A++ +G Sbjct: 290 DMAMKISAARALTYQAA----AASERGD--ADLTYLGAAAKCFASDVAMEVTTDAVQLLG 343 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY + + R R++ I G+ Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369 >gi|187926031|ref|YP_001892376.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|241665518|ref|YP_002983877.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] gi|187727785|gb|ACD28949.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|240867545|gb|ACS65205.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 391 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 22/245 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA+ S ++ + Y L G K W + ++D +++ A+ G + Sbjct: 130 FALSEPDAGSDVAAMASAAREDGND-YVLDGEKTWISNGGIADFYVVFARTGEAPGSRGI 188 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 ++E G+P +R+ N I + L F+N + V E K+ + Sbjct: 189 SAFIVEAGTPGFEIAERI-NVIA--PHPLARLRFTNCR--IPASQRVGAAG-EGFKVAMR 242 Query: 317 YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD SV+ R +L EA+ A R + G+L D + + +A +A I +A Sbjct: 243 TLDVFRTSVAAAALGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAAL 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++R A D+ ++ + EAA A++ A + A VI A++ GG G + E+ + Sbjct: 303 LTYRAAWQRDQGRNVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPVE 355 Query: 432 RHYRE 436 R YRE Sbjct: 356 RLYRE 360 >gi|17987180|ref|NP_539814.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|256044744|ref|ZP_05447648.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|260565653|ref|ZP_05836137.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265991166|ref|ZP_06103723.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|17982848|gb|AAL52078.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260151721|gb|EEW86815.1| glutaryl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|263001950|gb|EEZ14525.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] Length = 394 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ + +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVSEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCFNRARYGISWGVIGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGI 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|260365626|ref|ZP_05778147.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030] gi|308111453|gb|EFO48993.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus K5030] Length = 389 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + S G + +K+G R + T EL F+N +LG LN VE + Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + ++ +AD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVHGKLADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + ++A + +A++ +GG+GYI E + R Sbjct: 306 VYTVATACDRGECTRKDAAGVIL-------YSAELATQIALDAIQLLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|71424988|ref|XP_812975.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70877815|gb|EAN91124.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 407 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 30/309 (9%) Query: 170 VHKDWAPKIFSREYDPTNKA---PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 VH IF R + A P +S LTE G+D A+ ++ +K D + Sbjct: 114 VHNTLVNNIFLRFANSEQNAKFLPDLASSCVGCFCLTEAESGSDAFALRTRAEKKGDR-W 172 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIG 280 ++G K F+++ +D F+++A V+ G CF+V + +G+ R +K+G Sbjct: 173 VINGSKIFITNGGYADIFLVMANVDPSKGYKGITCFVVDKR----KSSGIHVGRPLDKLG 228 Query: 281 NRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA---- 335 R+++TVE+ F N + + N+ + +I I L+ + + V +A+ Sbjct: 229 LRASSTVEINFENC---EVPEENLIGEVGKGYQIAIATLNEGRIGIGAQMVGIAQGAMDI 285 Query: 336 -IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + Y +R + D ++ A+ A +I AA + + A +S +EAA A+ Sbjct: 286 VMPYLFQRKQFNTPVGDFQALQMQYAECATNIHAARLMVYNAARKKLMGESFVKEAAMAK 345 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 + ++A ++A+E GG G+ + + R YR++ +I G+ + + Sbjct: 346 LFGS-------QVAEKTASKAIEWAGGIGFTRDFGLERLYRDAKIGAIYEGTSIIQLQTI 398 Query: 455 LNLLEKGTN 463 L++K N Sbjct: 399 AKLIKKEYN 407 >gi|322493339|emb|CBZ28625.1| putative acyl-CoA dehydrogenase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 629 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 55/363 (15%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 ++A G M P ++ + LM+ + + + PK+ S E+ T Sbjct: 144 MIATANWGFSMYPGLSLGACRTLMSWASDEMKDQYLPKLVSGEWSGT------------- 190 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253 + LTE + GTD++ + ++ + DG Y +SG K F+S+ ++D I +LA++ + Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYRISGTKIFISAGDHDLTDNIIHVVLARLPNSL 250 Query: 254 ------GCFLVPRLL--EDGS----PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 FLVPR + +DGS N C L+ K+G + ++T +L F N+ G+L+G+ Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEAARNVECIA-LEKKMGIKGSSTCQLSFQNSVGYLIGE 309 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVMKRA 358 + + + A+ + ++ + YAR R GG + V R Sbjct: 310 PSAGMKQMFTFMNAARVGCALEGICHAELAFQNGLRYARERRSMRALGGTKEPEMVADRI 369 Query: 359 I--ADIALDIAAATALS-------FRLANSFDEAKSRSEEAAYARI------MAPITKYW 403 I A++ ++ A A++ + D + + A + PI K Sbjct: 370 ICHANVRQNVLFAKAIAEGGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKAC 429 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460 + + ++ GG GYI+ + + R+S +I G+ LD + L K Sbjct: 430 VTEWGVEAASRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTK 489 Query: 461 GTN 463 G N Sbjct: 490 GGN 492 >gi|256391383|ref|YP_003112947.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357609|gb|ACU71106.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 385 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 50/306 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + W PK+ S E + GLTE GG+D A T + +G + Sbjct: 103 TEEQKQQWLPKLCSGE-------------MLGAFGLTEPGGGSD-AGGTRTTAVLENGEW 148 Query: 227 CLSGHKWFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKN 277 ++G K F+++ +D I + V G + +VP G+P GL + Sbjct: 149 VINGTKCFITNSGTDITGLITVTAVTGTKPDGRKEISSIIVP----SGTP-GLTVAPKYS 203 Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333 K+G ++ T EL F++ LLGDL L LD ++++ + L+ Sbjct: 204 KVGWNASDTRELSFTDVRVPEANLLGDLGRGYA-----NFLRTLDEGRIAIAALSTGLSQ 258 Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 E++ YAR R G + ++ +AD+ L A + RLA + +A SR Sbjct: 259 GCVDESVKYARDREAFGRPIGANQAIQFKLADMRL-----RAHTSRLA--YYDAASRMLA 311 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 + A + K + + A EA + GG G++ E +AR +R+S + +G G + Sbjct: 312 GEPFKAEAAMAKLYSSESAVTNAREATQIHGGYGFMNEFPVARMWRDS--KILEIGEGTS 369 Query: 450 MVLDVL 455 V +L Sbjct: 370 EVQRML 375 >gi|33603689|ref|NP_891249.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33577814|emb|CAE35079.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 386 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 40/274 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 +G++E G+D++ I + ++ D Y ++G K W + D +L G Sbjct: 123 IGVSEASAGSDVSQIKTWARRDGDD-YVINGSKMWITNGVQGDWICLLCNTSQEGGPHKN 181 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PV 309 +VP G+ R +K+ R++ T EL F D+ V Sbjct: 182 KSLIIVPL-----DTPGVSVSRKLDKLVLRASDTAELFFD--------DVRVPVSNRIGA 228 Query: 310 EDMKILIYLDS-----AIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E+M + ++ ++ GMR + E I YA +R V GG ++ V+ +A Sbjct: 229 ENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQ 288 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + +I A +L +R + + + ++ +A + KY +++ + E ++ GG Sbjct: 289 MQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWGG 341 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G + E I+R YR+ +I G N ++L+V+ Sbjct: 342 QGVMNENWISRAYRDLRQTAI-GGGANEIMLEVI 374 >gi|329896697|ref|ZP_08271690.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium IMCC3088] gi|328921633|gb|EGG29009.1| Acyl-CoA dehydrogenase, short-chain specific [gamma proteobacterium IMCC3088] Length = 378 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 39/288 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ + E V LG++E G+D+ I + + D + L+G K Sbjct: 108 WLPKMVTGE-------------VVGALGMSEPGAGSDVQGIKTNAVRDGDE-WILNGSKI 153 Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+++ M +D I+ A + G L D S G + +KIG ++ T L F Sbjct: 154 FITNGMHADLVIVAAITDPGKGAKGTSLFLVDTSLPGFERGKKLDKIGQHASDTALLFFQ 213 Query: 293 NT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 + LLG+ N G V M+ L L A +V + +L + Y + R G Sbjct: 214 DMRLPADALLGEEN--KGFVIMMQELPRERLGIAAQAVYQAQGALDLTVQYVQERQAFG- 270 Query: 348 ILIDQPVMKR-----AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 QP+ K +AD+ +IA AL A + + +++AA ++ + Sbjct: 271 ----QPIAKFQNTRFKLADVKTEIALNKALYESCAAQYARGELTTDDAAMLKLAS----- 321 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 C M V+ + ++ GG GY E I+R Y ++ I GS M Sbjct: 322 --CDMQCRVVDDCLQLFGGYGYTTEYPISRFYVDARIQRIYGGSAEIM 367 >gi|324508921|gb|ADY43761.1| Very long-chain specific acyl-CoA dehydrogenase [Ascaris suum] Length = 620 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 31/268 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQ--VEG------ 251 LTE G+D +I S+ K +DG Y L+G K W ++ +D F + AQ V+G Sbjct: 191 LTEASSGSDANSIRSRADKTADGKYYILNGGKLWISNAGFADVFTVFAQTPVQGEDGITK 250 Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 +V F+V R S G+ + + K+G + + T E+ F NT LLG G Sbjct: 251 DKVSAFIVER-----SHGGVTHGPPEKKMGIKGSNTAEINFENTKVPVENLLG--KEGEG 303 Query: 308 PVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M IL I + M+ + + + + R G L D ++ + D+ Sbjct: 304 FKVAMNILNNGRFGIPAACTGSMKWCIKKTVDHITERTQFGKKLKDFGNVQEQLVDMITR 363 Query: 366 IAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A ++ + LA++ D+ + EAA ++MA + C A++ GG GY Sbjct: 364 HYATESILYMLASNMDKGVQDYQLEAAIGKVMASENAWRVCDA-------AIQLHGGMGY 416 Query: 425 IEERSIARHYRESPANSILLGSGNAMVL 452 ++E + R R+ I G+ + + L Sbjct: 417 MKECGLERVLRDLRIFRIFEGANDVLRL 444 >gi|299472599|emb|CBN78251.1| acyl-CoA dehydrogenase [Ectocarpus siliculosus] Length = 412 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D A + + D + L G K W ++ + + I+ A + + Sbjct: 155 LSEPGNGSDAGAARTTARLEGD-QWVLDGTKAWITNAHDAQSSIVFATTDSSKKHKGISA 213 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F+VP LE +P G+ + ++K+G R+++T L LLG+ + Sbjct: 214 FIVP--LE--TP-GMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEEGMG------F 262 Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD+ + ++G + +A A + Y+ R G + ++ I+++++ + Sbjct: 263 KIAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQSKISEMSMKL 322 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+++ A + D ++ ++EAA A++ A T +C A ++ +GG GY+ Sbjct: 323 DAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAA-------IQVLGGMGYVS 375 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 376 EMPAERHYRDARITEIYEGT 395 >gi|315506651|ref|YP_004085538.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] gi|315413270|gb|ADU11387.1| acyl-CoA dehydrogenase domain-containing protein [Micromonospora sp. L5] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 40/281 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG----RVGCF 256 LTE G+D AA+T++ + G + ++G K F+++ ++D ++ A+ G + F Sbjct: 125 LTEPDSGSDAAALTTRATR-DGGDWLITGAKTFITNGTVADVVLLFARTGGPGHRGISAF 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPV 309 LVP + GL + + K+G R AT EL F S G + G ++ Sbjct: 184 LVPT-----NVAGLTRREIHGKLGLRGQATGELRFDAVRVPDSARLGPVGGGFRLA---- 234 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 L L MSV+ V +A+ A+ YA +R G + ++++ +A IA+ Sbjct: 235 -----LATLAKGRMSVAAGCVGIAQGCLDAAVGYAGQRTQFGKPIAGHQLVQQLLAAIAV 289 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 D AAA L +R+A+ D ++ + EA+ A++ A + A A++ GG GY Sbjct: 290 DTAAARLLVWRVADLVDRGEAFATEASMAKLFA-------SEAAVRAANNAVQVFGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 I+E + ++ R++ ++ G+ L + L G N F Sbjct: 343 IDEYPVGKYLRDARVATLYEGTSQIQQLLIGRAL-TGVNAF 382 >gi|254469198|ref|ZP_05082603.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] gi|211961033|gb|EEA96228.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] Length = 379 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 22/268 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ ++ + D Y ++G K F+S +SD ++ + + G G + Sbjct: 124 LTEPGAGSDAASLRTRAVRDGDH-YVINGSKSFISGGGVSDVYVCMVRT-GEDGPKGISC 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 ++ + GL + ++K+G S T ++ F +N G +++ ++ + Sbjct: 182 IVVEKDAPGLSFGANEHKLGWCSQPTAQVIFEDCRVPVANLVGAEGQGFSIAMAGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I S+ G + L A+ Y R G L ++ +AD+A ++ AA L Sbjct: 242 LNI----GACSLGGAQFCLDRALQYMDERKQFGRSLAQFQALQFKVADMATELEAARLLL 297 Query: 374 FRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A D + ++ AA A+ +A T + V+ EA++ GG GY+++ + R Sbjct: 298 HKAAYMLDRKDPQVTKMAAMAKRLATDTGF-------KVVNEALQIHGGYGYLKDYPLER 350 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460 H R+ + IL G+ M + V L K Sbjct: 351 HLRDLRVHQILEGTNEIMRVIVARELMK 378 >gi|331003594|ref|ZP_08327091.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412435|gb|EGG91826.1| hypothetical protein HMPREF0491_01953 [Lachnospiraceae oral taxon 107 str. F0167] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 36/264 (13%) Query: 200 LGLTEKRGGTDI-AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEG 251 LTE G+D +A T+ S Y L+G K F++ ++++ + +G Sbjct: 122 FALTEPNAGSDAGSARTTAIYDESKEEYVLNGTKCFITGGGLAKYVLVFALTSPELKTKG 181 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 + C LV R G+P G ++++K+G + T EL F N G L+G L Sbjct: 182 -LSCILVER----GTP-GFSIGKIEDKMGLHGSETAELIFDNCRVPKGNLIGPLG----- 230 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI + LD A + ++ V +A E+I Y + R G + ++ +A++ Sbjct: 231 -KGFKIAMTALDGARIGIAAQAVGIAAGALDESIKYTKERVQFGRPISSLQGLQWYLAEM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A +++R A+ ++EAA I K+ K A V +A++ GG Sbjct: 290 ATKVECARWMTYRAASLKVSGLPHTKEAA-------IAKFNASKTAVEVTDKALQLHGGY 342 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY+ E + R YR++ I G+ Sbjct: 343 GYMREYPLERMYRDAKITEIYEGT 366 >gi|291403234|ref|XP_002718028.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase [Oryctolagus cuniculus] Length = 423 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 57/300 (19%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGDH-YVLNG 191 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNR 282 +K W + P +D I+ A+ + VP L+E P G + +K+G R Sbjct: 192 NKFWITNGPDADVLIVYAKTDMAA----VPASRGITAFLVEKNMP-GFSTSKKLDKLGMR 246 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPV-----EDMKILIY-LDSAIMSVSG-----MRVS 331 + T EL F D NV V + + +L+ LD + ++G M+ Sbjct: 247 GSNTCELIFE--------DCNVPAANVLGHVGKGVYVLMSGLDLERLVLAGGPLGLMQAV 298 Query: 332 LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 L I Y R G + +M+ +AD+ + A + +A + DE +++ A Sbjct: 299 LDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCA 358 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + + A V + ++C+GG+GYI + + R R++ I G+G + V Sbjct: 359 GVIL-------YSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|257388129|ref|YP_003177902.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] gi|257170436|gb|ACV48195.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] Length = 376 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 L+E G++ + + ++ D Y + G K W + S I+ A+ + V Sbjct: 120 FALSEPEAGSNPRQMQTVARREGDE-YVIDGEKAWITNGQRSGVVIVFAKTDPDDPNSVT 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---------S 305 FLVP+ +GL + K+G R+ S+T L D+ + Sbjct: 179 QFLVPK-----DSDGLTVGSKEEKLGLRA--------SDTTTLTLDDVRIPDRYRLTEEG 225 Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + IL + A +V + +L EA+ Y R G + D ++ IA++ Sbjct: 226 RGLAAALSILTGGRVGIAAQAVGLSQAALDEAVDYVTEREQFDGPIGDIQSVRHTIAEME 285 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A L+ A + D AR A + KY+ + A V +A++ GG G Sbjct: 286 TTVRAGRELTHAAARAMDRGDD-------ARASASVAKYFATEGAVDVTQQAVQLHGGYG 338 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + R YR++ +I G+ Sbjct: 339 YTSEFDVERFYRDAKVTTIYEGT 361 >gi|229542456|ref|ZP_04431516.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] gi|229326876|gb|EEN92551.1| acyl-CoA dehydrogenase domain protein [Bacillus coagulans 36D1] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 18/278 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + GLTE G+D A+ + ++ D Y L+G K F+++ ++D +I+ A Sbjct: 113 PLARGEKIGAYGLTEPGSGSDAGAMVTTARREGDH-YVLNGSKIFITNGGVADIYIVFAL 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + + G + + K+G R++ T E+ F N ++ N Sbjct: 172 TDPKSKHHGTSAFIIEKDFPGFSTGKKEKKMGIRASTTTEIIFDNV---IVPAENRLGEE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 + KI ++ LD ++ V +A+ A YA+ R G + + +AD+ Sbjct: 229 GQGFKIAMMTLDGGRNGIAAQAVGIAQGALDAATAYAKERKQFGKPIAANQGVSFKLADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA L+++ A +E+A +++ A T A V EA++ GG Sbjct: 289 ATAVEAARLLTYQAAWLESNGLPYGKESAMSKLFAGDT-------AMKVTTEAVQIFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 GY ++ + R R++ I G+ L + +L + Sbjct: 342 GYTKDYPVERFMRDAKITQIYEGTQEIQRLVISRMLTR 379 >gi|92116366|ref|YP_576095.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14] gi|91799260|gb|ABE61635.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 404 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIML---AQVEGRVGC 255 GLTE G+D + ++ +K+SDG Y L+G K W ++P++D F++ A + ++ Sbjct: 146 FGLTEPDAGSDPGGMKTRAEKVSDG-YRLTGSKTWISNAPIADLFVVWVRSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL +++ GP Sbjct: 205 FVLEKGMK-----GLSAPKIGGKLSLRASCTGEIVMDGVVVPEENLLPNVSGLKGP---- 255 Query: 313 KILIYLDSAIMSVS-GMRVSLAEAIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S G+ + + +H AR+ R G L ++++ +AD+ DIA Sbjct: 256 --FGCLNRARYGISWGVMGAAEDCMHRARKYVLERKQFGRPLAATQLVQKKLADMQTDIA 313 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE K E M I K C A + A + GG+G E Sbjct: 314 LGLQGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIE 366 Query: 428 RSIARH 433 + RH Sbjct: 367 YHVMRH 372 >gi|254464312|ref|ZP_05077723.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] gi|206685220|gb|EDZ45702.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] Length = 406 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A++ ++ +K ++G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 148 FGLTEPDAGSDPASMKTRAEK-TEGGYRLTGSKMWISNAPIADVFVVWAKSEAHGGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + L+ GL +++NK R++ T E+ LL + GP Sbjct: 207 FVLDKGLK-----GLSAPKIQNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AEA +A R R G L + + + +A++ +I Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHAARQYGLDRTQFGRPLANTQLFQLKLANMQTEIT 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DEA + E M I K C A + A + GG+G E Sbjct: 316 LGLQASLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARMARDMHGGNGISLE 368 Query: 428 RSIARH 433 ++ RH Sbjct: 369 FNVIRH 374 >gi|221065703|ref|ZP_03541808.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gi|220710726|gb|EED66094.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 397 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 27/267 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D ++ ++ K+ DG Y L G+K W + Sbjct: 113 FGTEAQKMKYLPKLASGEFIGCFGLTEPDHGSDPGSMATRAYKV-DGGYRLKGNKMWITN 171 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 SP++D F++ A+ G R +LE G GL + K+G R++ T E+ + Sbjct: 172 SPVADVFVVWAKEVSEDGTVGQIRGFVLEKGM-KGLSAPAIHGKVGLRASITGEIVMDDV 230 Query: 295 F---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSG 346 F D+ GP L+SA ++ + AE A Y R G Sbjct: 231 FCPEENAFPDVRGLKGP------FTCLNSARFGIAWGALGAAEDCWHTARQYTLDRKQFG 284 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 L ++++ +AD+ +I + R+ DE ++ E + + K C Sbjct: 285 RPLAANQLIQKKLADMQTEITLGLQAALRVGRMKDEHQNVIE-------ITSLIKRNNCG 337 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARH 433 + + A + +GG+G +E +ARH Sbjct: 338 KSLDIARMARDMLGGNGISDEFGVARH 364 >gi|107100206|ref|ZP_01364124.1| hypothetical protein PaerPA_01001229 [Pseudomonas aeruginosa PACS2] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIAARRLLEQGGML 383 >gi|56421541|ref|YP_148859.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|56381383|dbj|BAD77291.1| acetyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] Length = 594 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 35/269 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + + ++G Y L+G K W +S +D F++ A+V+G F+V Sbjct: 150 LTEPGSGSDALGAKTTARLNAEGTHYILNGEKQWITNSGFADVFVVYAKVDGEHFTAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVED 311 R G+ + K+G +S++T V + N G + G V Sbjct: 210 ERDF-----PGVSTGPEEKKMGIKSSSTRTLILQDVPVPKENVLG------EIGKGHVIA 258 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 IL + +V G + +L + YA +R + + + A +A + AA Sbjct: 259 FNILNIGRYKLGLGAVGGAKRALEITLKYANQRQQFKRPISQFTLTQEKFATMASRLYAA 318 Query: 370 TALSFRLANSFDE------------AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + +R FDE K ++ A I + K++ ++ ++ E ++ Sbjct: 319 ESSVYRTVGLFDERMGLLDAEKAKDGKEVAKSIAEYAIECSLNKFFATEVLDYIVDEGVQ 378 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG G+++E I R YR+S N I G+ Sbjct: 379 IHGGYGFMQEYEIERAYRDSRINRIFEGT 407 >gi|226315082|ref|YP_002774978.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] gi|226098032|dbj|BAH46474.1| acyl-CoA dehydrogenase [Brevibacillus brevis NBRC 100599] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 LTE G+D ++I + K D Y L+G+K F+++ +D +I A + G + Sbjct: 123 FALTEPHAGSDASSIRTTAVKKGDE-YILNGNKVFITNGGEADTYIAFAVTDSTKGPKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + D G + + K+G + T EL F N + N+ E I + Sbjct: 182 SAFIVDKDTPGFTVGKKEKKMGLHGSYTTELVFDNA---RVPAANLLGQEGEGFCIAMAN 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LDS + ++ + + E A YA+ R G + Q + +AD+A A L Sbjct: 239 LDSGRIGIAAQALGICEAAVQYATEYAQERKQFGQSIAKQQAIAFKLADMATKAEVARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +R A + + EA+ A K + A + EA++ GG GY E + R Sbjct: 299 VYRAAWLRSQGIACGMEASMA-------KRFATDSAMELATEAVQIFGGYGYTREYPVER 351 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 352 LFRDAKVTQIYEGT 365 >gi|291000919|ref|XP_002683026.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi] gi|284096655|gb|EFC50282.1| isovaleryl-CoA dehydrogenase [Naegleria gruberi] Length = 404 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/281 (22%), Positives = 128/281 (45%), Gaps = 33/281 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G+K W + P +D ++ A+ + G + Sbjct: 142 LAMSEPNSGSDVVSMKTRAEKKGDK-YILNGNKMWITNGPDADVLVVYAKTDISAGSKGI 200 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + +K G R + T EL F + +LG +N E +K+L Sbjct: 201 TAFIIEKGFKGFSTAQKLDKCGMRGSNTCELVFQDCEVPVENVLGKVN------EGVKVL 254 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++G + L E + Y R G + + +M+ +AD+ + Sbjct: 255 MSGLDYERCILAGGPLGLMEGCMDVVVPYVHERKQFGQSIGEFQLMQGKLADMYTKLNVC 314 Query: 370 TALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 + + +A + D +K ++ A A + A W + ++A++ +GG+GY + Sbjct: 315 RSYVYSVARACDLSPTSKPLRKDCAGAILYAAEGATW-------LASQAIQTLGGNGYTK 367 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 E + R +R++ I G+G + + +L G LFE+ Sbjct: 368 EYPVERIWRDAKLYEI--GAGTSEIRRML----IGRELFEE 402 >gi|239980708|ref|ZP_04703232.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291452567|ref|ZP_06591957.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291355516|gb|EFE82418.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 608 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + +DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVEQADGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G+ NG +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYEFDWETGEIGARNGAYATNVEHKMGLKASNTCEMTFGDKHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---IDQPVMK 356 + G + +I+ + + +++ + A+ YA+ R V G L +D+ K Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAIATLSTGYLNALEYAKER-VQGPDLAQFMDKTAPK 340 Query: 357 RAIA---DI--ALDIAAATALSFR--------LANSFDEAKSRSEEA----AYARIMAPI 399 I D+ +L A A R + ++ ++ E+A A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRTLVLYTAAVQDTIQVKEAAGEDATADHALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + + +A++++ GGSGY++E I ++ R++ +++ G+ Sbjct: 401 VKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGT 447 >gi|262204245|ref|YP_003275453.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087592|gb|ACY23560.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 611 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 51/291 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKATQQEDGSWHIDGVKRFITSADQDMTENIFHLVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLG 300 + F VP+ D G NG+ +++K+G +++AT E+ F G+L+G Sbjct: 224 KGLSLFFVPKFHFDFETGELGERNGVFVTNVEHKMGLKASATCEVTFGQHGTPAKGWLVG 283 Query: 301 DLNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG--------- 347 +++ +E ++++ ++S + A+ YA+ R V G Sbjct: 284 EVHKGIAQMFEVIEHARMMV----GTKAISTLSTGYLNALDYAKER-VQGADMTQMTDKS 338 Query: 348 ----ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IM 396 + P ++R++ A+ A+ D A ++ A A ++ Sbjct: 339 APRVTITHHPDVRRSLMTQKAYAEGLRAIYLYTASHQDVAAAQIVSGADASMAHRVNDLL 398 Query: 397 APITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 PI K + A A + E+++ +GGSG++++ I ++ R+S +S+ G+ Sbjct: 399 LPIVKGVGSERAYANLGHESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGT 449 >gi|306843953|ref|ZP_07476548.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1] gi|306275708|gb|EFM57432.1| glutaryl-CoA dehydrogenase [Brucella sp. BO1] Length = 394 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + ++ +KI DG Y LSG K W +SP++D F++ A+ + Sbjct: 136 FGLTEPDAGSDPAGMKTRAEKI-DGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA-IR 193 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +LE G GL ++ K+ R++ T E+ +L +++ GP Sbjct: 194 GFILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVEVPEDAILPNVSGLKGP------F 246 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R L + ++ +AD+ +IA Sbjct: 247 GCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGL 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ FDE K E M I K C A + +A + GG+G E + Sbjct: 307 QASLRVGRLFDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV 359 Query: 431 ARH 433 RH Sbjct: 360 MRH 362 >gi|169796334|ref|YP_001714127.1| putative Acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|184157731|ref|YP_001846070.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213156930|ref|YP_002318975.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215483795|ref|YP_002326020.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii AB307-0294] gi|301347073|ref|ZP_07227814.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301511209|ref|ZP_07236446.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|301595039|ref|ZP_07240047.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|332852010|ref|ZP_08433877.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332871763|ref|ZP_08440203.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113] gi|332876414|ref|ZP_08444183.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059] gi|169149261|emb|CAM87144.1| conserved hypothetical protein; putative Acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|183209325|gb|ACC56723.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|193077045|gb|ABO11804.2| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] gi|213056090|gb|ACJ40992.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213988222|gb|ACJ58521.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii AB307-0294] gi|322508038|gb|ADX03492.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323517624|gb|ADX92005.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332729587|gb|EGJ60925.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013150] gi|332731233|gb|EGJ62531.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6013113] gi|332735424|gb|EGJ66482.1| isovaleryl-CoA dehydrogenase [Acinetobacter baumannii 6014059] Length = 390 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G +K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|118466999|ref|YP_880344.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118168286|gb|ABK69183.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 16/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ +A++A I A S Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + ++ + +A+ A W V +A++ GG GY+ E + R Y Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R+ + +G G +L L+ Sbjct: 355 RD--MRILGIGGGTTEILTALS 374 >gi|149279058|ref|ZP_01885192.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39] gi|149230337|gb|EDM35722.1| acyl-CoA dehydrogenase [Pedobacter sp. BAL39] Length = 596 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 56/280 (20%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--GRVGCFL 257 LTE G+D + ++ + DG Y ++G K W + +D FI+ A+++ + F+ Sbjct: 150 LTEPNSGSDANSGKTKAKLADDGQHYLITGQKMWITNGGFADIFIVFAKIDDDANLTAFI 209 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS--------------NTFGFLLGDLN 303 V R G+ ++K+G + ++T ++ F+ N F + LN Sbjct: 210 VERGF-----GGITMNPEEHKMGIKGSSTRQVFFNDCPVPVKNMLSDRQNGFKIAVNILN 264 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA----- 358 + I L +A + S + + AI+YA R + D+P+ K Sbjct: 265 IGR---------IKLAAAAIGAS--KSVIDTAINYANER-----LQFDRPISKYGAIRYK 308 Query: 359 IADIALDIAAATALSFRLANSFDEA------------KSRSEEAAYARIMAPITKYWCCK 406 +A++A + A + ++R + D+A K++ + + I K W + Sbjct: 309 LAEMAAKVYAVESANYRAGQNIDDAYDALVAAGMDASKAKLKSTEQFAVECAILKVWGSE 368 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + V+ E ++ GG G+ E + R YR++ N I G+ Sbjct: 369 VLDYVVDEGVQIYGGMGFSAEAPMDRAYRDARINRIFEGT 408 >gi|145589003|ref|YP_001155600.1| acyl-CoA dehydrogenase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047409|gb|ABP34036.1| acyl-CoA dehydrogenase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 392 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 24/263 (9%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D + ++ +K+ G + L+G K W + Sbjct: 114 FGTEAQKQKYLPKLASGEWIGCFGLTEPNYGSDAGGMITRAKKVPGG-FSLTGSKMWISN 172 Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 +P++D F++ A+ EG + +++ + ++ GL ++ K+G R++ T E+ F Sbjct: 173 APIADVFVVWAKNDEGIIRGYILEKGMK-----GLSAPKISGKLGLRASITGEIVMDEVF 227 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILI 350 + D N L+SA +S + AE A Y R G L Sbjct: 228 ---VPDENEFPEVTGLKGPFTCLNSARYGISWGALGAAEWCWHAARQYTLDRKQFGKPLA 284 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++++ +AD+ +IA RL DE + E + I K C + Sbjct: 285 ANQLIQKKLADMQTEIALGLQGCLRLGRMKDEGIAAPE-------ITSIMKRNSCGKSLD 337 Query: 411 VIAEAMECIGGSGYIEERSIARH 433 + A + GG+G +E +ARH Sbjct: 338 IARMARDMHGGNGISDEYGVARH 360 >gi|126445155|ref|YP_001063921.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126458589|ref|YP_001076804.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|167725021|ref|ZP_02408257.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei DM98] gi|167829505|ref|ZP_02460976.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 9] gi|167850987|ref|ZP_02476495.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210] gi|217422006|ref|ZP_03453509.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|226196934|ref|ZP_03792512.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237510333|ref|ZP_04523048.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia pseudomallei MSHR346] gi|242311315|ref|ZP_04810332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] gi|254184581|ref|ZP_04891170.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|254193879|ref|ZP_04900311.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|126224646|gb|ABN88151.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 668] gi|126232357|gb|ABN95770.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106a] gi|169650630|gb|EDS83323.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei S13] gi|184215173|gb|EDU12154.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1655] gi|217394237|gb|EEC34256.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 576] gi|225930917|gb|EEH26926.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|235002538|gb|EEP51962.1| probable isovaleryl-CoA dehydrogenase (IVD) [Burkholderia pseudomallei MSHR346] gi|242134554|gb|EES20957.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1106b] Length = 383 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R YR++ SI G+ M+ Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370 >gi|183984502|ref|YP_001852793.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M] gi|183177828|gb|ACC42938.1| acyl-CoA dehydrogenase FadE13 [Mycobacterium marinum M] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 24/265 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D + ++G K +++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-FIVNGAKTYITSGVRADFVVTAVRTGGPGAGGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFVVSRKLDKMGWRSSDTAELSYTDARVPAANLVGAENSGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIA---AAT 370 + A + S + L + + R R G LI + ++ +A++A +D+A + + Sbjct: 242 ERIALAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRS 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + +LA D + +A+ A W V +A++ GG GY+ E I Sbjct: 302 VVERQLAGEHDLIP----QVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEI 350 Query: 431 ARHYRESPANSILLGSGNAMVLDVL 455 R YR+ + +G G +L L Sbjct: 351 ERQYRD--MRILGIGGGTTEILTAL 373 >gi|83648391|ref|YP_436826.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636434|gb|ABC32401.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 391 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/312 (21%), Positives = 129/312 (41%), Gaps = 45/312 (14%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + + S E AP + + +G++E G+D+A + + +K D Sbjct: 93 MCTPAI-----ARFGSHELKSEFLAPAIRGEMIGCIGVSETSAGSDVAGLKTSARKDGDD 147 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y ++G K W +SP +D +LA +VP L G+ +K Sbjct: 148 -YVINGSKMWITNSPQADFMCLLANTSDDKPHKNKTLMVVPMNLP-----GIEVAPHLDK 201 Query: 279 IGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS 326 +G RS+ T ++ F + GF++ + E M A ++ Sbjct: 202 LGMRSSETAQVFFDDVRIPQRYRIGAEGMGFMMQMVQFQE---ERMW------GAANTIK 252 Query: 327 GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 + + + I Y R R G LID + +A++ +I A AL+++ + + K Sbjct: 253 ALEACVNQTIAYCRERKTFGQPLIDNQYIHFRMAELQTEIEALRALTYQACELYIQGKDV 312 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ A+ A++ A ++ V ++ GG GY+ + ++R +R+ SI G+ Sbjct: 313 TQLASMAKLKAG-------RLGREVTDSCLQYWGGMGYMWDNPVSRAFRDVRLVSIGGGA 365 Query: 447 GNAMVLDVLNLL 458 M+ + L+ Sbjct: 366 DEIMLGIICKLM 377 >gi|115524393|ref|YP_781304.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518340|gb|ABJ06324.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris BisA53] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 24/267 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + DG Y L+G K F+S ++ ++ G G + Sbjct: 125 LTEPGSGSDAAALRTRA--VIDGDHYVLNGQKQFISGAGANDLYVVMVRTGAEGAGGIST 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 L+ + GL + + K+G + T + F + LGD + KI + Sbjct: 183 LVVERDTPGLSFGANERKMGWNAQPTRAVMFEDARVPVQNRLGDEGIG------FKIAMA 236 Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A S+ G + +L +++ Y R R G L + ++ +AD+A ++ AA Sbjct: 237 GLDGGRLNIAACSLGGAQSALDKSLDYTRERKAFGRRLDEFQALQFKLADMATELEAART 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 +R A + D A ++ + K + + V +A++ GG GY+ E I Sbjct: 297 FVWRAAAALDRKDHD------ASMLCAMAKRFGTDIGFQVANDALQLHGGYGYLAEYGIE 350 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLL 458 + R+ + IL G+ M + V L Sbjct: 351 KIVRDLRVHQILEGTNEIMRMIVARKL 377 >gi|254776056|ref|ZP_05217572.1| long-chain specific acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 386 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 48/317 (15%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 G + + + ++AL T + + W PK + E + + +TE G Sbjct: 93 GFGLHNDIVAPYLLALATEEQKQR-WLPKFCTGE-------------LITAIAMTEPGTG 138 Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 +D+ I ++ K D Y L+G K F+++ + SD I++AQ + G L+ + Sbjct: 139 SDLQGIKTRAVKQGDH-YVLNGSKTFITNGINSDLVIVVAQTDPDKGAQGFSLLVVERGM 197 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMK 313 G R +KIG + T EL F++ F +L+ +L P E + Sbjct: 198 EGFERGRHLDKIGLDAQDTAELSFTDVHVPAENLLGQEGMGFIYLMQNL-----PQERIS 252 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I A+M+ + M L + + Y + R G + + +A++A + + Sbjct: 253 I------AVMAAAAMEQVLEQTLEYTKERKAFGKSIGSFQNSRFVLAELATEATVVRMMV 306 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + K +E AA A K++ + +I ++ GG GY+ E +AR Sbjct: 307 DEFVRLHLDHKLTAELAAMA-------KWYSTEKQVHLIDRCLQLHGGYGYMREYPVARA 359 Query: 434 YRESPANSILLGSGNAM 450 Y ++ +I G+ M Sbjct: 360 YLDARVQTIYGGTTEIM 376 >gi|17230170|ref|NP_486718.1| hypothetical protein alr2678 [Nostoc sp. PCC 7120] gi|17131771|dbj|BAB74377.1| alr2678 [Nostoc sp. PCC 7120] Length = 1206 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/351 (23%), Positives = 148/351 (42%), Gaps = 39/351 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G + AI SQ DG + L G K W S+ + + + + + F+V Sbjct: 693 FALTETGAGANPQAIQSQAISDGDG-WLLRGEKIWSGSAAWAGVINVFVKHQQGISGFVV 751 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRS--NATVELE-FSNTFGFLLGDLNVSTGPVEDMKIL 315 R GSP GL +G R TV LE T +LG++ +D + Sbjct: 752 RR----GSP-GLRQGAEALTMGMRGMVQNTVYLEDIPVTSAQVLGEVGKGMNVAQDAMMY 806 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L A V GM+ + Y++RR ++ G L+D P++ + ++ I +L R Sbjct: 807 GRLAIASACVGGMQRCVQLMWRYSQRRQIATGKLLDHPIVLHRLQELTCAITVVQSLVMR 866 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGYIEERSI 430 + D ++ P Y CK+ AP +A ++ +GG GYIE Sbjct: 867 VGKLLDAGET-----------VPAEVYAACKISAPEFYWQAADLLVQTLGGRGYIESNIA 915 Query: 431 ARHYRESPANSILLGSGNAMVLDV-LNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRD 489 + R++ I G + + +L++G E L + L Q LG+ +V T LRD Sbjct: 916 PQILRDARVLRIFEGPTETLCGFLGARVLKQG----ETLQNFLCQTLGAV--EVGTRLRD 969 Query: 490 SISLCK------EDKGLARFLTEKIALASSAAALYRAGMNDIADVFLENRF 534 ++ + + + R++ ++ ++ A L+ + A ++++RF Sbjct: 970 AVDKIRGRCFDGANITVQRWVYHQVGKLATEAILWAVLDDKSAINWVKHRF 1020 >gi|332521398|ref|ZP_08397854.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix algicola 5H-3-7-4] gi|332043126|gb|EGI79324.1| acyl-CoA dehydrogenase domain-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 380 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 36/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + + + D Y ++G K W S +D ++++AQ + G + Sbjct: 125 LSEPEAGSDATSQRTTAEDKGDH-YIINGTKNWITSGGRADVYLVIAQTDKEKGHKGINA 183 Query: 261 -LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KILIY 317 ++E G+P G ++K+G R + T L+F+ D+ V P E+ + Sbjct: 184 FIVEKGTP-GFDVGPKEDKLGIRGSDTHTLQFN--------DVKV---PKENRIGEDGFG 231 Query: 318 LDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 A+ ++SG R+ +A A+ Y++ R G + + + +AD+ D Sbjct: 232 FKFAMKTLSGGRIGIAAQALGIASGAYELALKYSKERKAFGTEICNHQAIAFKLADMYTD 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I+AA L + A D+ + +A A++ + K+A EA++ GG+G++ Sbjct: 292 ISAARHLVMKAAWDKDQGNNYDMSSAMAKL-------YASKVAMEHTVEAVQIHGGNGFV 344 Query: 426 EERSIARHYRESPANSILLGS 446 +E + R R++ I G+ Sbjct: 345 KEYHVERLMRDAKITQIYEGT 365 >gi|293608452|ref|ZP_06690755.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829025|gb|EFF87387.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 390 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|269216717|ref|ZP_06160571.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122] gi|269129862|gb|EEZ60945.1| putative acyl-CoA dehydrogenase [Slackia exigua ATCC 700122] Length = 387 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/288 (20%), Positives = 125/288 (43%), Gaps = 32/288 (11%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S ++D + L ++E GG+D + + + DG L+G K F+++ Sbjct: 103 SSQFDMVRDRYASDGRLMFALAISEPEGGSDAMGMKTTVATV-DGRLILNGRKTFVNNGE 161 Query: 240 SDAFIMLAQVEGRV--------GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 ++++A ++G + +L+P LE G+ +K ++ ++ L F Sbjct: 162 YAPYLLIAAIDGDLEPVKHPPLSLWLLPHGLE-----GISVYPIK-----KAGQSI-LPF 210 Query: 292 SNTF--GFLLGDLNVSTGPVEDM-KILIYLD-----SAIMSVSGMRVSLAEAIHYARRRH 343 S+ +L + TG ++ + D S ++ R ++ +A+ YA +R Sbjct: 211 SDVIMENVVLDESYRLTGSEPGFPQLFRFFDIGRIFSCATALGLARAAMEDAVAYASKRQ 270 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +ID ++++ + D+ +D+ A +R A D E +R+ + K + Sbjct: 271 AFGADIIDFQMIQQMLVDMEIDVRAMRDSVYRTAREADRHGHTRE----SRLSIALMKRF 326 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A V + AM+ +GG GYI + ++ +R+ I G+ MV Sbjct: 327 VPETATKVASNAMQILGGRGYINDERVSMIWRDCRGFQIAEGTDQIMV 374 >gi|260555403|ref|ZP_05827624.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411945|gb|EEX05242.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 390 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKDMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G +K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|254514139|ref|ZP_05126200.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium NOR5-3] gi|219676382|gb|EED32747.1| long-chain specific acyl-coa dehydrogenase [gamma proteobacterium NOR5-3] Length = 382 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 31/286 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + W PK+ S E A G L +TE G+D+ I + + D + L+G Sbjct: 110 QQWLPKMVSGE--------------AFGALAMTEPGAGSDVQGIRTSAVRDGDE-WILNG 154 Query: 231 HKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K F+++ + +D ++ A + G L D + G R KIG ++ T +L Sbjct: 155 SKIFITNGIHADIVVVAAITDPGKGAKGTSLFLVDTTLEGFEKSRKIEKIGQHTSDTAQL 214 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344 F + LLG+ N G V M+ L L A +V +L + Y + R Sbjct: 215 FFQDVRLPANALLGEEN--RGFVIMMEELPRERLGIAAQAVGAAEGALDITVDYVKERKA 272 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + +AD+ I AL + A+ + + +++AA + K Sbjct: 273 FGQSIGEFQNTRFKLADVKTQIGLNRALYEQCADEYAQGTLTADKAA-------MLKLAS 325 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 C+M + I + ++ GG GY E I+R Y ++ I GS M Sbjct: 326 CEMQCSTIDDCLQLFGGYGYTVEYPISRFYTDARIQRIYGGSSEIM 371 >gi|167572276|ref|ZP_02365150.1| non-ribosomal peptide synthetase [Burkholderia oklahomensis C6786] Length = 1282 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 15/267 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AI S Q+I + +SG K W SS + + A+ G ++ Sbjct: 752 LTEPAAGSNVRAIASTAQRIDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMIGL 809 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R L + LG L + Sbjct: 810 AVRQGTP-GLRIGAEDLTMGVRGMIQNALHLDRARVSDACRLGALGQGMAVAQQTMNFAR 868 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V GM+ A+ +H Y RR + G+L+D P+ ++ + D+ I AL +L Sbjct: 869 LGIGAVCVGGMK-RCAQLMHRYGARRQIGTGLLLDNPLSRQRLGDLRHRIDGLNALIEQL 927 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ I K + E M+ +GG GYIE + +R+ Sbjct: 928 AADFDAGRDAPEDGLL------IAKILGSEFLSQSSDELMQMLGGRGYIETNLAPQIFRD 981 Query: 437 SPANSILLGSGNAMVLDVLNLLEKGTN 463 + I G ++ + + L G++ Sbjct: 982 ARLPRIFEGPTETLLAHLGSRLLNGSD 1008 >gi|56459977|ref|YP_155258.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR] gi|56178987|gb|AAV81709.1| Acyl-CoA dehydrogenase family protein [Idiomarina loihiensis L2TR] Length = 385 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 38/266 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256 LTE G+D A++ + +K D Y L+G K F+S + +D +++A+ +G G F Sbjct: 124 LTEPGSGSDAASLRTSAKKDGDE-YVLNGSKMFISGAGETDVLVVMARTGEDGPKGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304 VP G+ Y + ++K+G + T + F + GF + + Sbjct: 183 AVP-----ADAKGVIYGKAEDKMGWNAQPTRLVTFEDVRIPAENLLGKEGEGFKFAMMGL 237 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 G + + A+ SV + +L A Y + R G L ++ +AD+A Sbjct: 238 DGGRI---------NIAVCSVGTAQAALNTAKAYMQERTQFGKPLAAFQALQFKLADMAT 288 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 ++ AA + A+ D + +++ Y + K + + V +A++ GG GY Sbjct: 289 ELVAARQMVRLAASKVD--NNDADKTTYC----AMAKQFATDVGFKVCNDALQLHGGYGY 342 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 I+E + RH R+ + IL G+ M Sbjct: 343 IKEYPLERHVRDVRVHQILEGTNEVM 368 >gi|172064812|ref|YP_001815524.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6] gi|171997054|gb|ACB67971.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6] Length = 1272 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 21/272 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255 +TE G+ + AI S+ Q+ G + ++G+K W SS + + F A G VG Sbjct: 734 FAITEPAAGSHVRAIASRAQRTGSGDWLVTGNKRWSGSSAWAGIINVFARQADGTGMVGL 793 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 + P G+P G+ + +G R L + + LGD+ + Sbjct: 794 AVRP-----GTP-GVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMLVAQHA 847 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + L A + V GM+ A+ +H Y RR V G+L+D P+ + + ++ I A Sbjct: 848 MNIARLGIAAVCVGGMK-RCAQLMHRYGGRRQVGTGLLLDNPLSRLRLGELRDRIDGLNA 906 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L LA D + E+ I+K ++ E M+ +GG GYIE Sbjct: 907 LVEHLATELDLGVALPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAP 960 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 + +R++ I G +++ + + L G++ Sbjct: 961 QIFRDARLTRIFEGPTETLLVHLGSRLLNGSD 992 >gi|84501856|ref|ZP_01000014.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84389851|gb|EAQ02485.1| Acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 399 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%) Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 LGLTE G+D + ++ + K D Y L+G K ++++ P++D ++ A+ G Sbjct: 134 LGLTEPGAGSDALGSMRTTATKDGDD-YILNGAKIYITNGPIADLVLVYAKTAPEKGAKG 192 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E +P Q+L NK+G R + T EL F + G ++G L+ G V Sbjct: 193 ISAFIVETDTPGFKVAQKL-NKMGFRGSPTGELVFEDCRVPAGNMVGKLD---GGVAVTM 248 Query: 314 ILIYLDSAIMSVSGMRVS---LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L+ AI+ + M ++ L +I YA+ R G + +++ +AD+ I AA Sbjct: 249 SGLDLERAIVCFNAMGIAQRALDISIDYAKTRQQFGKPIASFQMVQAMLADMYTQIEAAR 308 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +LS R A + + + Y + V+ +A++ GGSGY+ + + Sbjct: 309 SLSLRTAAMCEGLEEGEGGRGEIHKLTAAAIYKAAEATSFVLDKAVQIHGGSGYMRDTEV 368 Query: 431 ARHYR 435 R YR Sbjct: 369 NRLYR 373 >gi|262371413|ref|ZP_06064730.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii SH046] gi|262313635|gb|EEY94685.1| long-chain specific acyl-coa dehydrogenase [Acinetobacter johnsonii SH046] Length = 379 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 49/293 (16%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK+ + E V + +TE G+D+ AI +Q D Y + G K Sbjct: 109 WLPKMVTGE-------------VVTAIAMTEADAGSDLQAIRTQAIPNQDH-YLVDGSKT 154 Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 F+S+ + +D +++A+ + LL D S NG+ R KIG + T EL F Sbjct: 155 FISNGIHADLIVLVAKTNPEARAKGISLLLVDASLNGVEKGRSLKKIGLHAQDTAELFFD 214 Query: 293 NT--------------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 F +L+ +L P E + I ++M++ + ++ Y Sbjct: 215 QVKVPKNQRLGEEGQGFSYLMQEL-----PRERLSI------SMMALGSILGAIELTSDY 263 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMA 397 ++R G L + +A+ + AA A + A + +A S S AA + Sbjct: 264 VQQRKAFGQPLSHMQNTRFVLANSQIKAKAAQAFVDQCAEQYSRDALSVSHVAA---LKC 320 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 IT C VI + ++ GG GY++E I+R + ++ I G+ M Sbjct: 321 FITDTQC-----DVIDQLLQLFGGYGYMQEYPISRFFVDARVQKIYGGTNEIM 368 >gi|264681456|ref|NP_001161107.1| isovaleryl-CoA dehydrogenase, mitochondrial [Sus scrofa] gi|262204892|dbj|BAI48026.1| isovaleryl Coenzyme A dehydrogenase [Sus scrofa] Length = 426 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + K D Y L+G Sbjct: 150 EKYLPKLISGEY--------------IGALAMSETNAGSDVVSMKLKADKKGD-YYVLNG 194 Query: 231 HK-WFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 +K W + P +D ++ A+ + + F+V E G P G + +K+G R Sbjct: 195 NKFWITNGPDADVLVVYAKTDLAAVPPSRGITAFIV----EKGMP-GFSTSKKLDKLGMR 249 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAI 336 + T EL F + + +N+ + + +L+ LD + ++G M+ L I Sbjct: 250 GSNTCELIFEDC---KVPAVNILGQLSKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTI 306 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE ++ A + Sbjct: 307 PYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTPKDCAGVVL- 365 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C+GG+GYI + + R R++ I G+G + V Sbjct: 366 ------YSAECATKVALDGIQCLGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412 >gi|284035996|ref|YP_003385926.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] gi|283815289|gb|ADB37127.1| acyl-CoA dehydrogenase domain protein [Spirosoma linguale DSM 74] Length = 606 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/342 (18%), Positives = 147/342 (42%), Gaps = 59/342 (17%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 +A ++ +P + + + P + + + T + LTE + G+ ++ +T+ Sbjct: 132 AAHLITSFGSPELSETYVPNMLAGTWQGT-------------MALTEPQAGSSLSDVTTS 178 Query: 218 GQKISD-----GIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR------VGCFLVPRL 261 + D G Y + G K F+S+ DA +MLA+++G + F+VP+ Sbjct: 179 ATPLPDDQFGPGAYKIKGQKVFISAGDHDAVENIVHLMLARIDGAPKGTKGISLFVVPKY 238 Query: 262 LEDGS----PNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD----LNVSTGPVE 310 DG+ N + + +K+G + + L +T G+++G L + Sbjct: 239 RPDGNGGFVDNDVTSTGVYHKMGQKGVPAMHLTMGTNDDTIGYIVGQPHQGLPYMFQMMN 298 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--------------VMK 356 + +I + + +A ++ + +L A + R ++ L+D P + + Sbjct: 299 EARIGVGMTAAAIATAAYHAALEYAKERPQSRRLNQKNLLDAPQTPIINHPDVRRMLLFQ 358 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--RIMAPITKYWCCKMAPAVIAE 414 +A+ + +L + A RL + + A+ +E A+ ++ P+ K + +M +++ Sbjct: 359 KAVTEGSLSLLIEAA---RLYDISEVAEGGEKENAFLLLDLLMPVAKSYPSEMGVQSVSQ 415 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +++ GG G+ E+ + + YR+ I G+ D+L Sbjct: 416 SLQTFGGYGFTEDFPVEQLYRDIRITPIYEGTTGIQAQDLLG 457 >gi|119504493|ref|ZP_01626572.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119459515|gb|EAW40611.1| glutaryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 400 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 28/254 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D +T++ + + DG Y +SG K W +SP++D F++ A Sbjct: 134 PKLATGEWIGCFGLTEPDHGSDPGGMTTRAKSV-DGGYRVSGAKMWISNSPIADVFVVWA 192 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + + V + +LE G GL +++ K+ R++ T E+ F LL ++ Sbjct: 193 KTDDDV---IRGFILEKGM-EGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVRG 248 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAI-HYARR----RHVSGGILIDQPVMKRAI 359 GP L++A ++ + AE H AR+ R G L +++ + Sbjct: 249 LKGP------FGCLNNARYGIAWGTLGAAETCWHTARQYTLDRQQFGRPLAANQLIQLKL 302 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ DI+ A FR A A + S + + + K C A + +A + + Sbjct: 303 ADMQTDISLAMQGCFR-AGQMLSAGTISPD------LISLIKRNSCGKALEIARKARDML 355 Query: 420 GGSGYIEERSIARH 433 GG+G +E I RH Sbjct: 356 GGNGISDEYPIMRH 369 >gi|254497542|ref|ZP_05110334.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12] gi|254353259|gb|EET12002.1| acyl CoA dehydrogenase [Legionella drancourtii LLAP12] Length = 386 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 41/287 (14%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ Q D + L+G Sbjct: 112 EKYLPKLISGEY--------------IGALAMSESNSGSDVVSMQLHAQASGD-TFILNG 156 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W + P +D ++ A+ + + + L+E G P Q+L +K+G R + T E Sbjct: 157 TKMWITNGPDADVLVVYAKTDKQAASKGITAFLIEKGMPGFKTAQKL-DKLGMRGSNTCE 215 Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY-LDS-----AIMSVSGMRVSLAEAIHYA 339 L F +LG++N + +K+L+ LD A V M+ + + Y Sbjct: 216 LVFEQCEVPAEQILGEIN------QGVKVLMSGLDYERTILAAGPVGIMQACMDVVLPYV 269 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R + + ++ +AD+ D++A+ A + +A + D+ ++AA + Sbjct: 270 HERKQFEQAIGEFQFIQGKLADMYTDLSASRAYLYTIAKACDQGLVSRKDAAGVIL---- 325 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + +A++ +GG+GYI E R R++ I G+ Sbjct: 326 ---YTAEKATQMALQAIQILGGNGYINEYPTGRLLRDAKLYEIGAGT 369 >gi|55378695|ref|YP_136545.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55231420|gb|AAV46839.1| glutaryl-CoA dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 387 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 20/241 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G++ +A+ + ++ +DG Y L+G K W ++P+SD ++ A+V G + Sbjct: 128 FGLTEPEHGSNPSAMETTAERDADG-YVLNGSKTWITNAPISDLAVVWAKVTSADGDPVR 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIY 317 L+E +G+ ++ K+ R++ T E+ N + + NV G VE MK L Sbjct: 187 GFLVET-DRDGVTTNKIDEKLSLRASITGEISLQNAH---VPEENVLPG-VEGMKGPLSC 241 Query: 318 LDSAIMSVSGMRVSLA----EAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L A ++ V A E H YA R G + + + +A++A I+ L Sbjct: 242 LTQARYGIAWGTVGAAMDCFETAHEYATDREQFGKPIAGYQLQQEKLAEMATQISLGQLL 301 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + RLA+ + R E+ + A K +MA A E +GG+G + S R Sbjct: 302 AHRLADLKERGDLRPEQVSMA-------KRNNARMAREQSRVAREMLGGNGITADYSPMR 354 Query: 433 H 433 H Sbjct: 355 H 355 >gi|195160855|ref|XP_002021289.1| GL25250 [Drosophila persimilis] gi|198465055|ref|XP_001353478.2| GA17761 [Drosophila pseudoobscura pseudoobscura] gi|194118402|gb|EDW40445.1| GL25250 [Drosophila persimilis] gi|198149996|gb|EAL30989.2| GA17761 [Drosophila pseudoobscura pseudoobscura] Length = 415 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 38/278 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + G Sbjct: 155 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGTKMWISNSDVAGVFLVFANAKPEDGYRG 212 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLGDLNVSTG 307 + + D GL + ++K+G R++ T L F N TFG + G Sbjct: 213 ITTFIVDRETPGLIVNKPEDKLGIRASGTCMLTFDNVRVPEENILGTFGH---GYKYAAG 269 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +L+ + + V LA+ I Y R G + + M+ IA I Sbjct: 270 ---------FLNEGRIGIGAQMVGLAQGTFDATIPYLLERKQFGESIYNFQSMQHQIATI 320 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A +I AA +++ A ++ +EAA A K++ ++A + ++ +GG Sbjct: 321 ATEIEAARLMTYNAARLQEQGVPFLKEAAMA-------KFYASEVAQRAAIKCIDWMGGV 373 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G+ + + YR+ +I G+ N + + ++K Sbjct: 374 GFTRDFPQEKFYRDVKIGAIYEGTSNMQLSTIAKCVKK 411 >gi|15616048|ref|NP_244353.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125] gi|10176110|dbj|BAB07205.1| butyryl-CoA dehydrogenase [Bacillus halodurans C-125] Length = 594 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 49/313 (15%) Query: 202 LTEKRGGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + A T+ + Y L+G K W +S +D FI+ A+++G F+V Sbjct: 150 LTEPSSGSDALGAKTTAVLNEAGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIV 209 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + E G+ + K+G + ++T L + LLG+ V G V IL Sbjct: 210 EKDFE-----GVSTGPEEKKMGIKGSSTRTLILEDALVPKENLLGE--VGKGHVIAFNIL 262 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-----RAIADIALDIAA 368 + + G + + A YA R QP+ K +A++A+ A Sbjct: 263 NVGRYKLGVGCIGGSKRGIELAAKYANERK-----QFKQPIAKFTLIQEKLANMAVTTYA 317 Query: 369 ATALSFRLANSFDE---AKSRSEEAAYARIMAPITKYWC-CKMAPAVIAEAMECI----- 419 A + +R F++ S ++ + I +Y C + V +EA++ + Sbjct: 318 AESSIYRTGGLFEDRLGGLSEEQQKDGREVAKAIAEYAIECSLNKVVGSEALDFVADEAV 377 Query: 420 ---GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNL 464 GG G++ E + R YR+S N I G+ L V L LEK T L Sbjct: 378 QIHGGYGFMAEYEVERMYRDSRINRIFEGTNEINRLLVPGTILRKAMKGELPFLEKATAL 437 Query: 465 FEQLFSTLEQDLG 477 E+L + Q++G Sbjct: 438 QEELMMLMPQEVG 450 >gi|330897773|gb|EGH29192.1| Acyl-CoA dehydrogenase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 383 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 31/267 (11%) Query: 194 TSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG 251 T AIG LTE G++ + ++ + D + ++G K F+S+ + I+ A + Sbjct: 117 TGRAIGCFCLTEPHAGSEAHNLRTRAELQGDE-WVINGAKQFVSNGKRAQLAIVFAVTDP 175 Query: 252 RVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD-- 301 ++G FLVP G R ++K+G R++ T + +N LLG+ Sbjct: 176 QLGKKGLSAFLVPT-----ENPGFVVDRSEHKMGIRASDTCAVTLNNCRIPAANLLGERG 230 Query: 302 --LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 L+++ +E +I I A ++ R + A+ YAR R +I+ + + Sbjct: 231 KGLSIALSNLEGGRIGI----AAQALGIARGAFEAALAYARERVQFDKPIIEHQSIANLL 286 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ I AA L+ A ++ EA+ A++ A W C ++A++ Sbjct: 287 ADMHTRINAARLLTLHAARLRSAGQACLSEASQAKLFASEMAEWVC-------SKAIQIH 339 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY+E+ + R+YR++ I GS Sbjct: 340 GGYGYLEDYPVERYYRDARITQIYEGS 366 >gi|330811602|ref|YP_004356064.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379710|gb|AEA71060.1| acyl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 378 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 46/272 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGC-- 255 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFL 298 FLV E G+P +RL+ K+G ++ T EL F + F +L Sbjct: 182 TSLFLV----EAGTPGFEKGKRLE-KVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYL 236 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + +L P E + + AI ++ +L + Y R R G + D + Sbjct: 237 MQEL-----PQERLTV------AIGGLASAEAALQWTLDYTRERKAFGKSIADFQNTRFK 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++A +I R + K AA A KYW + V+ E ++ Sbjct: 286 LAEMATEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQL 338 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG G++ E IAR + ++ I G+ M Sbjct: 339 HGGYGFMWEYPIARAWADARVQRIYAGTNEIM 370 >gi|240169351|ref|ZP_04748010.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 382 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 14/260 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YVINGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182 Query: 260 -RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 ++E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LVVVEKGTP-GFEVSRKLDKMGWRSSDTAELSYTDVRVPAANLVGGENTGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ +A++A I A S Sbjct: 242 ERIGLAAQAYSSAQRCLDITVQWCRDRETFGRPLISRQAVQNTLAEMARRIDVARVYSRH 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + E + E A++ K + V +A++ GG GY+ E + R YR Sbjct: 302 VV----ERQLAGETNLIAQVC--FAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYR 355 Query: 436 ESPANSILLGSGNAMVLDVL 455 + + +G G +L L Sbjct: 356 D--MRILGIGGGTTEILTAL 373 >gi|168186941|ref|ZP_02621576.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum C str. Eklund] gi|169295176|gb|EDS77309.1| acyl-coa dehydrogenase, short-chain specific [Clostridium botulinum C str. Eklund] Length = 379 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F++ SP+++ F++ A + G + Sbjct: 123 FGLTEPNAGTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDRSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G+ ++++K+G R E+ + LLG G MK Sbjct: 182 SAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIA--MKT- 238 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + V+ + LAE A Y + R G L + +AD+ + I + Sbjct: 239 --LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQSR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L ++ A + S AA A++ C A V EA++ GG GYI++ + Sbjct: 297 YLLYQAAMDKNNGNPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYPV 349 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 350 ERMMRDAKITQIYEGT 365 >gi|47522686|ref|NP_999063.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Sus scrofa] gi|13878316|sp|P79273|ACADS_PIG RecName: Full=Short-chain specific acyl-CoA dehydrogenase, mitochondrial; Short=SCAD; AltName: Full=Butyryl-CoA dehydrogenase; Flags: Precursor gi|1695727|dbj|BAA13964.1| short-chain acyl-CoA dehydrogenase [Sus scrofa] Length = 413 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 29/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L+E G+D A + Q D + LSG K W ++ + A ++ A + + Sbjct: 152 FALSEPGNGSDAGAAATTAQADHDS-WVLSGTKAWITNAWEASAAVVFASTDRSLQNKGI 210 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FLVP GL + ++K+G R+++T L F + + N+ P K Sbjct: 211 SAFLVPM-----PTAGLTLGKKEDKLGIRASSTANLIFEDC---RIPKENLLGEPGMGFK 262 Query: 314 I-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD + ++ + +++A ++YA R G L ++ +AD+AL + Sbjct: 263 IAMKTLDMGRIGIASKALGISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALE 322 Query: 368 AATALSFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 +A L++R A D K+ +E A A++ A + A A+ +A++ +GG GY+ Sbjct: 323 SARLLTWRAAMLKDNKKNPFIKEPAMAKLAA-------SEAATAITHQAIQILGGMGYVT 375 Query: 427 ERSIARHYRESPANSILLGS 446 E RHYR++ I G+ Sbjct: 376 EMPAERHYRDARITEIYEGT 395 >gi|295400653|ref|ZP_06810630.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977234|gb|EFG52835.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 379 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 50/297 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDIAAITSQGQKISD 223 T K + PK+ S EY LG LTE G+D ++ ++ + D Sbjct: 102 TEEQKKKYVPKLASGEY----------------LGAFCLTEPGAGSDAKSLKTKAVRQGD 145 Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVGCFLVPRLLEDGSPNGLCYQRLKNK 278 Y L+G K F+++ +D +I+ A+ +G G + ++E G+P G + + K Sbjct: 146 -YYILNGSKIFITNGGEADTYIVFARTAPNEKGSRG--ISAFIVEKGTP-GFIIGKDEKK 201 Query: 279 IGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAE 334 +G + TV++ F + LLG+ + KI + LDS + ++ + +AE Sbjct: 202 MGLHGSRTVQIMFEDAKVPAENLLGEEG------QGFKIAMANLDSGRIGIAAQSLGIAE 255 Query: 335 A-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 A YA+ R G + +Q + +AD+A + AA L + A + +E Sbjct: 256 AALEHATAYAKERIQFGKPIAEQQGVAFKLADMATAVEAAKLLVYHAAFLRAQGLRCGKE 315 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 AA A++ A T M A+ EA++ GG+GY ++ + R +R++ I G+ Sbjct: 316 AAMAKLFASRT-----AMENAI--EAVQIFGGNGYTKDYPVERLFRDAKICEIYEGT 365 >gi|257454746|ref|ZP_05620000.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60] gi|257447866|gb|EEV22855.1| isovaleryl-CoA dehydrogenase 2 [Enhydrobacter aerosaccus SK60] Length = 391 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + G+Y L+G K W + P +D ++ A+ +G + Sbjct: 127 LAMSEPGAGSDVTSMKLRAED-KGGVYVLNGSKMWITNGPDADVMVVYAKTNPELGAKGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T E+ F N +LG LN +K+L Sbjct: 186 TAFLVEKGMKGFYTAQKLDKLGMRGSHTGEMVFDNVEVPSDNILGGLN------NGVKVL 239 Query: 316 IY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++ + L +A+ Y R G + + +++ +AD+ + A Sbjct: 240 MSGLDYERAVLAAGPIGLMQAVMDNVTPYIHDRKQFGQAIGEFQLIQGKVADMYTTLQAG 299 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + + + D + S+ R W + A + E ++ GG+GY E Sbjct: 300 RSFLYTVGKNLD--RLGSDHVRQVRKDCASVILWTAEKATWMAGEGIQIFGGNGYTNEYP 357 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 358 LGRIWRDAKLYEIGAGT 374 >gi|33600185|ref|NP_887745.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] gi|33567783|emb|CAE31697.1| probable acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 388 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 33/264 (12%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGR- 252 A+ L+E+ G+D A+ + ++ G + + G K W + S FI+ A+ EG+ Sbjct: 123 AVNFALSERGAGSDAGAVQATAEREGAG-WRIRGEKCWLGNGGHSHHFIVFARTGPEGQR 181 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG--FLLGDLNVSTGP 308 + F+V R E G+ ++K+G R T L+ L+G+L Sbjct: 182 NNISAFVVAREAE-----GVAVDFYEDKMGIRGTTTTNLKLDTWVAEDALVGELG----- 231 Query: 309 VEDMKI---LIYLDSAIMSVSGMRVSL---AEAIHYARRRHVSGGILIDQPVMKRAIADI 362 +K+ + + +++ ++L AEA +A R G +ID + +AD Sbjct: 232 -HGLKLALATLTIGRVVVAAQANGIALCAYAEACDFAVSRETFGRSIIDHQGIGFKLADA 290 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++++ + + A ++D + S A A+++A +++ V+ +AM+ +GG Sbjct: 291 MTGLSSSRMMVYEAARAYDAGEDISTLGAMAKLLAS-------EVSHTVVDDAMQVLGGR 343 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY++ + R YR+ I G+ Sbjct: 344 GYVKPSAAERCYRDQRITEIYEGT 367 >gi|89095579|ref|ZP_01168473.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89089325|gb|EAR68432.1| acyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 376 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 18/252 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ ++ + D Y L+G K F+++ +D +I+ A +G V Sbjct: 124 LTEAGAGSDAGSLKTKAVRNGDE-YILNGSKVFITNGGEADVYIVFASTSPELGTKGVSA 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLD 319 + +GL + + K+G + TV+L F + + N+ E KI + LD Sbjct: 183 FIVGKGTSGLVIGKDEEKMGLHGSRTVQLNFED---MRVPAENLLGAEGEGFKIAMANLD 239 Query: 320 SAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + ++ + +AEA Y++ R G + Q + +AD+A ++ A+ L + Sbjct: 240 AGRIGIAAQALGIAEAALEAAVAYSKERSQFGKPISHQQGIGFKLADMATNVEASRLLVY 299 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A + + A + K + K A EA++ GG GY E+ + R++ Sbjct: 300 -------QAAMMRQNGERCGMQASMAKLFASKTAVETSIEAVQVFGGYGYTEDYPVERYF 352 Query: 435 RESPANSILLGS 446 R+S I G+ Sbjct: 353 RDSKITEIYEGT 364 >gi|219670532|ref|YP_002460967.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] gi|219540792|gb|ACL22531.1| acyl-CoA dehydrogenase domain protein [Desulfitobacterium hafniense DCB-2] Length = 591 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 40/346 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + ++G Y L+G K F+++ +D F++ A+VEG++ F+V Sbjct: 148 LTEPGSGSDALGAKATAVLNAEGTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 R + GL + + K+G + ++T ++ + ++G+L G V IL Sbjct: 208 RTMP-----GLSFGPEEKKMGIKGSSTRQVILEDVAVPVENIVGELG--RGHVVAFNILN 260 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 A ++ +++L + YA R G L ++ A+IA A ++ + Sbjct: 261 VGRFKLAAAAIGSAQLALEVTLKYAAERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVY 320 Query: 375 RLANSFDEA--------KSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 R A +EA R E YA I + K ++ + E ++ GG Sbjct: 321 RTAGLMEEACQDLDVTGDCRKEAGKAIEEYA-IECSLNKVLASEVLDLAVDEGVQIHGGY 379 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 G+I E I R YR+S N + G+ ++ LL GT L ++ S E L ++ K Sbjct: 380 GFIAEYPIERMYRDSRINRLFEGTN-----EINRLLVPGT-LLKRAMSG-ELPLLAAAKN 432 Query: 483 VITILRDSISLCKEDKGLARFLT-----EKIALASSAAALYRAGMN 523 V L S L E++GLA L +K+ L ++ A GM Sbjct: 433 VSKDLM-SAGLGSEEEGLAALLNMTQKAKKLCLMAAGIAAQNLGME 477 >gi|332662461|ref|YP_004445249.1| butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] gi|332331275|gb|AEE48376.1| Butyryl-CoA dehydrogenase [Haliscomenobacter hydrossis DSM 1100] Length = 604 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 73/394 (18%), Positives = 165/394 (41%), Gaps = 63/394 (15%) Query: 96 KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155 +V+ H + H ++ GL + + + + + I AA ++M +M Sbjct: 71 QVKVHSSIHEFIKTFSEAGLMSAPFSEEWGGIQLPKV--IAAAAEFIMGSAHNSMVMYTD 128 Query: 156 VT--SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA 213 +T +A+++ P + PK+ S E+ T + LTE + G+ ++ Sbjct: 129 LTKGAANLIYTFGNPEQKAAFLPKMLSGEWMGT-------------MCLTEVQAGSSLSD 175 Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLVP--R 260 + + +DG Y + G K F+S+ D ++LA+++G + F+VP R Sbjct: 176 VATAASPQADGTYLIKGQKIFISAGDQDVTDNIVHLVLARIDGAPKGTKGISLFIVPKKR 235 Query: 261 LLEDGS--PNGLCYQRLKNKIGNRSNATVELEF---SNTFGFLLGDLNVSTGPVEDMKIL 315 + G+ PN + + +K+G ++ + LEF ++ G+LLG++N ++ Sbjct: 236 INSAGTLEPNDVDSIGIYHKMGQKATPAMHLEFGGKNDCVGYLLGEINRGLP-----QMF 290 Query: 316 IYLDSAIMSV--SGMRVSLAEAIHY---------ARRRHVSGGI-----LIDQPVMKRAI 359 + +++A + V G+ ++ A RR + + +I P ++R + Sbjct: 291 LMMNAARLGVGMGGIHIASAAYYAALQYAQERPQGRRLNEKQALVEPVCIIQHPDVRRML 350 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------IMAPITKYWCCKMAPAVI 412 + +L + D K +++ + ++ P+ K + +M + Sbjct: 351 FLQKAIVEGGLSLILQCYQYLDLEKVHADQPEVKQHYNQLLELLTPVAKTYGAEMGFVAV 410 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + ++ +GG GY E+ + + R+ S+ G+ Sbjct: 411 NQGLQVLGGYGYTEDFPLEQLARDVRIMSLYEGT 444 >gi|332524728|ref|ZP_08400926.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332108035|gb|EGJ09259.1| isovaleryl-CoA dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 392 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 112/254 (44%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + D Y L+G K W + P +D ++ A+ E +G V Sbjct: 128 LAMSEPGAGSDVLSMKLRAVPRGDA-YVLNGSKMWITNGPDADTLVVYAKTEPELGGRGV 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG++N G M L Sbjct: 187 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPAENVLGEVN--GGAKVLMSGL 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ + M+ + E + Y R G + + +++ +AD+ + A + Sbjct: 245 DY-ERAVLAAGPIGIMQAVMDEVVPYVHERRQFGRSIGEFQLIQAKLADMYTVLQAGRSF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + + D + + I WC + A + E ++ GG+GYI + + R Sbjct: 304 CYTIGKNLDALGTGHVRRVRKDCASVI--LWCAEKATWMAGEGIQIFGGNGYINDYPLGR 361 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 362 LWRDAKLYEIGAGT 375 >gi|325121814|gb|ADY81337.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQSLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|297623950|ref|YP_003705384.1| acyl-CoA dehydrogenase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165130|gb|ADI14841.1| acyl-CoA dehydrogenase domain protein [Truepera radiovictrix DSM 17093] Length = 397 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 30/261 (11%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE----GR--- 252 GLTE G+D A + ++ + D + +SG K F++ + +++LA+ + G+ Sbjct: 135 GLTEPGSGSDAAGMRTRAEDRGDH-FVISGSKIFITQGTVGGTYVILARTDDPRPGKSAA 193 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + F+VP G GL + + K+G ++ T L F + L V Sbjct: 194 DGISAFVVP-----GDAPGLVRGKPEEKLGLHASDTTPLTFEDLVVPAENLLGVRGEAFR 248 Query: 311 DMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 D ++ LD + + M R +L A YA R G + + IA++A + Sbjct: 249 D--VMAVLDGGRIGIGAMGIGLGRAALEIAAKYALEREQFGRPIAHNQGVSFKIAEMATE 306 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA L + A D + + AA A++ + C A++ +GG GYI Sbjct: 307 LEAARLLVLKAAALKDAGRPFTMAAAQAKLKGSVAGVRACD-------HAIQILGGYGYI 359 Query: 426 EERSIARHYRESPANSILLGS 446 E + R +R++ I G+ Sbjct: 360 REYEVERLWRDARLTRIGEGT 380 >gi|256827295|ref|YP_003151254.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641] gi|256583438|gb|ACU94572.1| acyl-CoA dehydrogenase [Cryptobacterium curtum DSM 15641] Length = 398 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 31/281 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-- 247 Q SV +TE+ GGT A I + +K DG + L+G KW +S + SD ++A Sbjct: 117 FQDKSVYCNFAITEQTGGTG-ADIHTTAEKQPDGSWILNGEKWLISHTDCSDYTYVIAVS 175 Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 + + R+ FLVP + +P G + + +G R L F+N +LLG Sbjct: 176 DPTKEKDDRLSAFLVP----NDAP-GFEIVEMPHMMGCRGAGHAGLRFTNVKLEPKYLLG 230 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + V+ + ++ I + + M+ + +SL A R G + + ++K Sbjct: 231 KEGQGMEVAIHSLSVSRVHIAMSNLGMAQRMLELSLKR----ANDRITFGKPIATRQMIK 286 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 IAD+ + I + A +D Y A I K + V E + Sbjct: 287 AKIADMQMMIHVLRTAIYDFARDYDIDPKND----YITEKAAICKLFSIDTVKRVSDEML 342 Query: 417 ECIGGSGYIEERSIA---RHYRESPANSILLGSGNAMVLDV 454 E GG GY E+ R YR+ A + G+ N + + Sbjct: 343 EIFGGDGYFEDSPYGPTERLYRDCRAMWLEEGAPNVQRITI 383 >gi|195591382|ref|XP_002085420.1| GD12323 [Drosophila simulans] gi|194197429|gb|EDX11005.1| GD12323 [Drosophila simulans] Length = 420 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 46/285 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 LTE G+D ++ + +K DG Y ++G K W +S ++ F++ A + R F Sbjct: 154 FALTEPGAGSDAFSLKTVAKK--DGSHYVINGSKMWISNSDVAGVFLIFA-MPARGFSFF 210 Query: 258 -------VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----------TFGFLLG 300 + + D GL + ++K+G R++ T +L F N TFG Sbjct: 211 KYNGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH--- 267 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVM 355 + G +L+ + ++ V LA+ I Y R G + + M Sbjct: 268 GYKYAAG---------FLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSM 318 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + IA +A +I AA +++ A ++ +EAA A KY+ ++A + Sbjct: 319 QHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA-------KYYASEVAQRAAIKC 371 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++ +GG G+ + ++YR+ +I G+ N + + ++K Sbjct: 372 VDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 416 >gi|83718162|ref|YP_438493.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|167614964|ref|ZP_02383599.1| acyl-CoA dehydrogenase [Burkholderia thailandensis Bt4] gi|257141544|ref|ZP_05589806.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] gi|83651987|gb|ABC36051.1| acyl-CoA dehydrogenase [Burkholderia thailandensis E264] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----QVEGRV 253 L +TE GG+D+AA+ + I DG Y ++G K F++S + + +A G Sbjct: 130 LAITEPGGGSDVAAL--RASAIRDGDHYVVNGEKVFITSGIRADYYTVAVRTDPHARGAK 187 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 G L LL +G GL LK K+G ++ T L F + + G + Sbjct: 188 GLSL---LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVM 243 Query: 314 ILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ ++ S + +V +A+ +AR+R G + D V++ + D+A+ I A Sbjct: 244 QNFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + A D A R+ A A I + K + + A++ +GG GY+ Sbjct: 304 AWLEQCAWQMDHADGRA-PALVATIC--MLKNFATQTMQFCADAAVQILGGMGYMRGTRP 360 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 361 ERIYREVKVNMIGGGAQEIM 380 >gi|78060297|ref|YP_366872.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] gi|77964847|gb|ABB06228.1| Acyl-CoA dehydrogenase [Burkholderia sp. 383] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 21/271 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P T IG + +TE G+D+ A+ + + D +Y ++G K F+++ +++ I++ Sbjct: 117 PRLATGELIGAIAMTEPGTGSDLQAVRTTAAREGD-LYRINGSKTFITNGQLANLVIVVC 175 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + EG G L+ ++E +G R +K+G + T EL F + LLG Sbjct: 176 KTSKDEGAQGMSLL--VIETDQASGFRRGRNLDKLGMDAQDTSELFFDDVQVPVDNLLGG 233 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 N G ++ M+ L L A+ ++ M +++ E + Y + R G +P+ + Sbjct: 234 -NEGMGFIQLMQELPQERLIVAVAGIAAMELAMQETLAYTKERQAFG-----KPIF--SF 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 + +A AL D A A + KYW +I E ++ Sbjct: 286 QNTRFKLAECQALLMASRALVDAAIVAHLNGELGVDRAALIKYWVTDNQCKLIDECLQFF 345 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY++E IAR Y ++ I G+ M Sbjct: 346 GGYGYMKEYPIARLYADARVQRIYGGTNEIM 376 >gi|26990204|ref|NP_745629.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24985147|gb|AAN69093.1|AE016543_2 acyl-CoA dehydrogenase [Pseudomonas putida KT2440] Length = 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%) Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 G +MS SV ++A T + + W P++ S E IG LTE Sbjct: 85 GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259 + G++ + ++ + + DG + ++G K F+S+ I+ A + +G FLVP Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312 +P G R ++K+G R++ T + F N +LG+ L ++ +E Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ R + A+ Y+R R G + + + +AD+ + + AA L Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K EA+ A++ A +MA V + A++ GG GY+E+ + R Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352 Query: 433 HYRESPANSILLGS 446 +YR++ I GS Sbjct: 353 YYRDARITQIYEGS 366 >gi|294507759|ref|YP_003571817.1| acyl-CoA dehydrogenase [Salinibacter ruber M8] gi|294344087|emb|CBH24865.1| acyl-CoA dehydrogenase [Salinibacter ruber M8] Length = 786 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 38/308 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------------Q 248 L+E G+D AA S K DG Y L+G K W S MS ++ + Sbjct: 260 LSEPNVGSDAAAQESFSVKTDDGDYILNGEKKWSTSGAMSGLCTVMCKNMVPNPETGELE 319 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + P + DG +++ + K G R F++ + + NV Sbjct: 320 QQGVNALIVTPDM--DGVE---VFEKNRAKTGIRGTWQARFRFNDV---RVPEENVLHEE 371 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 +K+ L L+ ++S A+A I +A+ R+ L D ++K+ IA + Sbjct: 372 GAGLKVALSCLNYGRCTLSAGVTGAAKAARDQGIKWAQTRYQFERPLADFELVKQKIARM 431 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + A A+ + + D+ + + ITK +C VI EA++ +GG Sbjct: 432 SAVTYAMDAMLYMMTGLLDQGEDD------IMVETAITKVFCSDFGWNVIDEALQVMGGE 485 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL-----NLLEKGTNLFEQLFSTLEQDLG 477 GY+ E + R +R++ + I+ GS M + L EK ++ E L ++ +G Sbjct: 486 GYMTEHELERAWRDNRIHGIVEGSNEVMQSFIFAYGGKQLAEKMVSIQEALLWDSDESIG 545 Query: 478 SSGKKVIT 485 + +++T Sbjct: 546 DNLSRILT 553 >gi|119478557|ref|ZP_01618500.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119448461|gb|EAW29710.1| Acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/249 (22%), Positives = 114/249 (45%), Gaps = 30/249 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFLVP 259 LTE G+D +++ + ++ D +Y L+G K +++ +P + F ++A+ + + G + Sbjct: 124 LTEPDVGSDASSVKTSAKRDGD-VYILNGTKRYITNAPRAGTFTVMARTDPDKPGASGIT 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDM 312 + D + +G+ + K+G +T ++ F N G + G G M Sbjct: 183 AFIVDANSDGITVGQSDKKMGQAGTSTSDVIFEDVKVPAKNVIGGVEG-----KGFYTSM 237 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 K+L D + ++ + V +AE A+ +A R G + + +++ +AD + Sbjct: 238 KVL---DRGRIHIAALSVGIAERLIKDALQFAIERKQFGKPIAEHQLIQAMLADSKTEAY 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + + D ++ + EA+ K + +M V A++ GGSGY+ E Sbjct: 295 AAKCMVMDASRQRDLGENITAEAS-------CCKLYATEMVGRVADRAVQIHGGSGYMAE 347 Query: 428 RSIARHYRE 436 ++ R YR+ Sbjct: 348 YAVERFYRD 356 >gi|21230885|ref|NP_636802.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769116|ref|YP_243878.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|188992264|ref|YP_001904274.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|21112494|gb|AAM40726.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574448|gb|AAY49858.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|167734024|emb|CAP52230.1| putative glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. campestris] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 24/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GL+E +GG+D AA+T++ + DG W + ++D I+ A + V FLV Sbjct: 133 FGLSEAQGGSDPAAMTTRAVRDGDGWRLRGAKMWITNGSIADLAIIWAHTDDGVRGFLV- 191 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------GFLLGDLNVSTGPVEDM 312 D G Q + +K+ R++ T + + F LG L G + Sbjct: 192 ----DTRSEGFRAQDIGHKMSLRASVTSAVFLDDVFVPEQQRLPDALG-LKAPLGCLSQA 246 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + I + +V+ +R EA+ Y+ R + G L + +AD+A IA A L Sbjct: 247 RFGIAWGAIGAAVACLR----EALAYSGERILFGRPLAATQSAQIKLADMARRIATAQLL 302 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +L + R E+ + A K+ C+MA V E + +G +G E R Sbjct: 303 ALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIR 355 Query: 433 H 433 H Sbjct: 356 H 356 >gi|83953923|ref|ZP_00962644.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83841868|gb|EAP81037.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 37/281 (13%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +K +D Y LSG+K W + Sbjct: 106 NGSPEQKAKFLPGLCSGQHVGALAMSEPSAGSDVVSMKLRAEKRNDH-YRLSGNKYWITN 164 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 P +D ++ A+ + G + L + S G +K+G R + T EL F + Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEV 224 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350 F +LG+ + M L Y + +++ G M L E + Y R G + Sbjct: 225 PFENVLGEEGRGVAVL--MSGLDY-ERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIG 281 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC---- 405 + +M+ +AD+ + +A A + +A + D +R++ AA CC Sbjct: 282 NFQLMQGKMADMYTAMNSARAYVYEVAKACDRGDVTRADAAA------------CCLYAS 329 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A +A++ +GG+GY+ + + R +R++ I G+ Sbjct: 330 EEAMKQAHQAVQAMGGAGYLSDNPVGRIFRDAKLMEIGAGT 370 >gi|328470425|gb|EGF41336.1| isovaleryl-CoA dehydrogenase [Vibrio parahaemolyticus 10329] Length = 389 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDANAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + S G + +K+G R + T EL F+N +LG LN VE + Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ +AD+ ++AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMSAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + ++A + +A++ +GG+GYI E + R Sbjct: 306 VYTVAAACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|327439092|dbj|BAK15457.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 594 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 41/328 (12%) Query: 152 MSP----SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKR 206 MSP S+T + V + + P V +F T P + I LTE Sbjct: 102 MSPAGGFSITHGAHVGIGSLPIV-------LFGNHEQKTKYLPKLASGALIAAYALTEPG 154 Query: 207 GGTD-IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLE 263 G+D + A T+ + Y L+G K W ++ +D F++ A+++G + F+V R Sbjct: 155 SGSDALGAKTTAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGDKFTAFIVER--- 211 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--L 318 S G+ + K+G +S++T L + LLG+ V G + IL Sbjct: 212 --SFPGVSVGPEEKKMGIKSSSTRTLILEDAEVPVENLLGE--VGRGHIIAFNILNIGRY 267 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 + +V + + A+ Y +R L + + K IA +A I A+ +L++R Sbjct: 268 KLGVGTVGASKRAFELAVAYTNQRQQFKTKLSNFNLTKEKIASMASHIYASESLNYRTVG 327 Query: 379 SFD------------EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 F+ + KS + A I I K + + V EA++ GG G++ Sbjct: 328 YFEDRLSQLSDEEQKDGKSIAAAIAEYAIECSIAKVFGSETLDFVADEAVQLHGGYGFMA 387 Query: 427 ERSIARHYRESPANSILLGSG--NAMVL 452 E + R YR+S N I G+ N M++ Sbjct: 388 EYEVERIYRDSRINRIFEGTNEINRMIV 415 >gi|90425736|ref|YP_534106.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90107750|gb|ABD89787.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D Y L+G K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RYVLNGSKMWITNGPVAETLVVYAKTDPTAGARGM 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + NG + +K+G R + T EL F + +LGD V G M L Sbjct: 190 TAFIIEKGMNGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGD--VGRGVNVLMSGL 247 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ M+ L + Y R G + +++ +AD+ + + A+ A Sbjct: 248 DY-ERAVLAAGPLGIMQACLDVVMPYIHERKQFGQPIGLFQLVQGKVADMYVTLNASRAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ E++A A + A C +A++ +GG+GYI + R Sbjct: 307 VYAVAKACDRGETSREDSAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTGR 359 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 360 LLRDAKLYEI--GAGTSEIRRML----IGRELFEK 388 >gi|325286939|ref|YP_004262729.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489] gi|324322393|gb|ADY29858.1| Butyryl-CoA dehydrogenase [Cellulophaga lytica DSM 7489] Length = 380 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 37/290 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231 W + F E T +IG L+E G+D A + + I G Y L+G Sbjct: 96 WGLETFGTEEQKQKYLTRLTTGESIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYVLNGT 153 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + +D ++++AQ + G + L+ + G +NK+G R Sbjct: 154 KNWITNGSSADIYLVIAQTDIEKGHKGINALIVEKGAEGFEIGPKENKLGIRG------- 206 Query: 291 FSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AI 336 S+T + D+ V P E+ + A+ ++SG R+ +A A+ Sbjct: 207 -SDTHSLIFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAGAYELAL 262 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y+++R G + + + +AD+ I AA L ++ A D ++ A A++ Sbjct: 263 KYSKQRKAFGTEIANHQAIAFKLADMHTSIEAARMLVYKAAMDKDNHENYDLSGAMAKL- 321 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + K+A V EA++ GG+G++++ + R R++ I G+ Sbjct: 322 ------YASKVAMDVAVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGT 365 >gi|302525612|ref|ZP_07277954.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302434507|gb|EFL06323.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 381 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 16/268 (5%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T +G + +TE G+D+ I ++ + D Y ++G K F+++ SD ++ Sbjct: 115 PKMATGELVGAVAMTEPGTGSDLQNIKTRAVRDGDH-YVINGAKTFITNGFHSDLVVVAC 173 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 + + G V ++ + + G R+ +K+G + T EL F + LLGD Sbjct: 174 KTDPDAGAQGVSLIVVETNTPGFRRGRVLDKVGLKGQDTAELFFDDVRVPAANLLGDAE- 232 Query: 305 STGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 G ++ M L L A+ +V+G+ ++ I Y + R G + + K +A+ Sbjct: 233 GQGFIQLMLQLPQERLIIAVTAVAGLEAAVNLTIDYTKERTAFGRPIFNFQNTKFKLAEA 292 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + A + A D+ R A + K W + V+ + ++ GG Sbjct: 293 ATEAAVSRAF-------LDQCIERHLRGELDVQGAAMAKLWTTERVNKVVDDCLQLFGGY 345 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR + + + I G+ M Sbjct: 346 GYMTEYPIARAWADVRISRIFGGTSEIM 373 >gi|224826999|ref|ZP_03700097.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] gi|224600832|gb|EEG07017.1| acyl-CoA dehydrogenase domain protein [Lutiella nitroferrum 2002] Length = 395 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 34/317 (10%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 S +++ ++ +H WA + E P T +G GLTE G+D A + ++ Sbjct: 101 SAMSVQSSLVMHPIWA---YGTEAQKDKYLPKLATGEWVGCFGLTEPDAGSDPAGMKTRA 157 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLK 276 +K+ DG Y L G K W +SP++D F++ A+ +G + F++ + ++ GL ++ Sbjct: 158 RKV-DGGYQLKGSKMWITNSPIADVFVVWAKDDDGEIRGFVLEKGMQ-----GLSAPKIH 211 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 K R++ T E+ + F LL + GP L+ A ++ + A Sbjct: 212 GKFSLRASITGEIVMDDVFVPEENLLPGVKGLKGP------FGCLNKARFGIAWGAMGAA 265 Query: 334 E-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 E A Y R G L +++ +A++ +IA A + ++ D ++ E Sbjct: 266 EFCWHAARQYTLDRKQFGRPLAANQLIQLKLANMQTEIALGLAAALQVGRLMDAGRAAPE 325 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 M + K C A + A + GG+G +E + RH A + G+ + Sbjct: 326 -------MISLIKRNNCGKALDIARVARDMHGGNGIADEFHVIRHVMNLEAVNTYEGTHD 378 Query: 449 AMVLDVLNLLEKGTNLF 465 L +L + G F Sbjct: 379 VHAL-ILGRAQTGIQAF 394 >gi|83942684|ref|ZP_00955145.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36] gi|83846777|gb|EAP84653.1| isovaleryl-CoA dehydrogenase [Sulfitobacter sp. EE-36] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 39/290 (13%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + +K +D Y LSG+K W + Sbjct: 106 NGSPEQKAKFLPGLCSGQHVGALAMSEPSAGSDVVSMKLRAEKRNDH-YRLSGNKYWITN 164 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 P +D ++ A+ + G + L + S G +K+G R + T EL F + Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFDDVEV 224 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILI 350 F +LG+ + M L Y + +++ G M L E + Y R G + Sbjct: 225 PFENVLGEEGRGVAVL--MSGLDY-ERVVLAGIGLGIMAACLDEIMPYMVERKQFGQPIG 281 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC---- 405 + +M+ +AD+ + +A A + +A + D +R++ AA CC Sbjct: 282 NFQLMQGKMADMYTAMNSARAYVYEVAKACDRGDVTRADAAA------------CCLYAS 329 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + A +A++ +GG+GY+ + + R +R+ A + +G+G + + +L Sbjct: 330 EEAMKQAHQAVQAMGGAGYLSDNPVGRIFRD--AKLMEIGAGTSEIRRML 377 >gi|299532369|ref|ZP_07045761.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] gi|298719607|gb|EFI60572.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] Length = 388 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254 LTE G+D A++ ++ + + + Y ++G K F+S S ++L G G Sbjct: 124 LTEPGAGSDAASLKTRAELVGN-EYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP G+ Y + + K+G S T + F N + N+ E KI Sbjct: 183 AFAVP-----ADAAGVSYGKKEEKMGWNSQPTRVISFDNV---RIPAHNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +L +A Y + R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQSYMQERKQFGKSIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + RLA S +A +R S A A+ A + C EA++ GG GYI Sbjct: 295 ARQM-VRLAASKLDAGARDASTYCAMAKRFATDAGFMVCN-------EALQLHGGYGYIR 346 Query: 427 ERSIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 E + R R++ + IL G+ M V+ +LE Sbjct: 347 EYPLERLMRDARVHQILEGTNEIMRVIIARRMLE 380 >gi|254775186|ref|ZP_05216702.1| FadE20_1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 30/287 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PKI S E + + +TE G+D+ ++ + ++ D Y ++G Sbjct: 115 RRWLPKIISGE-------------AVLAIAMTEPGTGSDLQSVKTTARRDGD-FYVINGS 160 Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVE 288 K F+S+ D +++A+ + G V ++ + N G R+ K+G + T E Sbjct: 161 KTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETDENLAGFERGRVLAKMGQHAQDTRE 220 Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343 L FS+ LLG G + M+ L L A + + V++ EAI Y+R R Sbjct: 221 LFFSDMRVPVANLLG-AQEGLGFYQLMEQLARERLIIATICAALAEVAVLEAIKYSRERE 279 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G + K +AD + A + + + K+ A+ A++ A Sbjct: 280 AFGRPIGKFQHTKFVLADCKTEALAIKTMVDYAVGQYLDGKNDPATASMAKLFA------ 333 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + ++ + ++ GG GY+ E IA Y S N I G+ M Sbjct: 334 -AEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVNRIYGGTSEIM 379 >gi|256396869|ref|YP_003118433.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256363095|gb|ACU76592.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 397 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 49/287 (17%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIML--- 246 M + V ++E G+D+AAIT++G + DG Y ++G K +L++ S + L Sbjct: 118 MAEGEVRAAFSMSEPALGSDVAAITTKG--VPDGDDYVINGQKMWLTNGGSSTLVALLAR 175 Query: 247 -----AQVEGRVGCFLV--PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN------ 293 A + FLV P + +P GL K+G + T EL S+ Sbjct: 176 TDLGEAAAHKNLTTFLVEKPAGFGEVAP-GLTVPGKIAKMGYKGVDTTELVLSDYRIPAN 234 Query: 294 ---------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 F ++ + V ++ + + ++V + A YA++R Sbjct: 235 RILGGAPGKGFAHMMDGVEVG-------RVNVAARACGIAVRAFELGAA----YAQQRTT 283 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + ++ +A++ + + AA A+ R A D + EA A KY Sbjct: 284 FGKPIAQHQAIQFKLAEMGVKVEAAHAMMVRAAKVKDAGRRNDLEAGMA-------KYLA 336 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + V+ ++ GG GY +E I R YRE+P +L+G G A + Sbjct: 337 AEYCKEVVEDSFRIHGGYGYSKEYEIERLYREAPM--LLIGEGTAEI 381 >gi|154292281|ref|XP_001546716.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] gi|150846171|gb|EDN21364.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] Length = 428 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 37/252 (14%) Query: 200 LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--GRVG 254 GLTE G+D ++ T++ G Y +SG K W +SP++D F++ A+++ G++ Sbjct: 164 FGLTEPNHGSDPGSMETTAKPHPTKKGYYSISGAKTWITNSPIADVFLVWAKLQETGKIR 223 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTG 307 F++ R D P L LK+K G R++ T ++ +N F + G G Sbjct: 224 GFIIDR--ADCPPGTLETPALKDKNGLRASLTGMIQLDECPVPEANMFQTVEG----LRG 277 Query: 308 PVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIAD 361 P L+SA ++ GM +L I AR R+ G L ++++ +AD Sbjct: 278 P------FTCLNSARYGIAWGMTGALENCIDRARTYALERKQFKGNPLAKYQLVQKKLAD 331 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 D A T ++ D+ ++ E M + K C A E GG Sbjct: 332 AVSDAAFGTLACVQVGRLKDKGEAAPE-------MISMIKRQNCDAALRNARTLQEIFGG 384 Query: 422 SGYIEERSIARH 433 + +E I RH Sbjct: 385 NAASDEYGIGRH 396 >gi|302125401|gb|ADK93986.1| glutaryl-CoA dehydrogenase-like protein [Sphingopyxis macrogoltabida] Length = 394 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 39/250 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D + + +K DG Y LSG K W +SP +D F++ A+ E G++ Sbjct: 137 FGLTEPDAGSDPGGMRTVAKKDGDG-YVLSGAKTWISNSPFADVFVVWAKSEAHGGKIRG 195 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F++ D GL ++K KI R++ T G ++ D V G M Sbjct: 196 FIL-----DKGMKGLEAPKIKGKISLRASTT---------GMIMMD-EVRVGADALMPGG 240 Query: 316 IY-------LDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIA 363 L+ A +S + AE +A R R G L + ++ +AD+ Sbjct: 241 EGLGGPFGCLNRARYGISWGAMGAAEFCFHASRQYGLDRKQFGRPLAATQLHQKKLADMM 300 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +DIA S R+ DE + +A M + K A + +A + GG+G Sbjct: 301 VDIAMGLQSSLRVGRLMDEGR-------FAPEMVSMVKRNNVGKALDIARQARDMHGGNG 353 Query: 424 YIEERSIARH 433 EE + RH Sbjct: 354 ISEEYQVIRH 363 >gi|317051582|ref|YP_004112698.1| acyl-CoA dehydrogenase domain-containing protein [Desulfurispirillum indicum S5] gi|316946666|gb|ADU66142.1| acyl-CoA dehydrogenase domain-containing protein [Desulfurispirillum indicum S5] Length = 592 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + DG Y L+G K F+++ + F + A+++ FLV Sbjct: 146 LTEPGSGSDALGAQATAVLSEDGKYYILNGTKQFITNGGFAQLFTVFAKIDKEHFTAFLV 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + E GL + K+G + ++T ++ +N LLG+ + G +L Sbjct: 206 EKDFE-----GLEIGAEEKKLGIKGSSTTQVILNNCRIPVENLLGE--IGKGHKIAFNVL 258 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A+ + M +L E I YA R G + + IA++ DI AA + Sbjct: 259 NVGRFKLGAAVSGAAKM--ALQEGIKYANERKQFGRPISSFGAISEKIANMTADIFAAES 316 Query: 372 LSFRLANSFDEAKSRSEEA------AYARIM---AP---ITKYWCCKMAPAVIAEAMECI 419 L +RLA D + E+ Y + + AP I K +C ++ + E ++ Sbjct: 317 LIYRLAGLLDNKLATIEKGIDNYYEEYQKGIEEYAPECGIAKVFCSEVLARTVDEVLQIH 376 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG G++ E R YR+ N I G+ Sbjct: 377 GGYGFVSEYPAERFYRDERINRIFEGT 403 >gi|154249274|ref|YP_001410099.1| acyl-CoA dehydrogenase domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153210|gb|ABS60442.1| acyl-CoA dehydrogenase domain protein [Fervidobacterium nodosum Rt17-B1] Length = 379 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K + LTE G+D + + + D Y L+G K F+++ ++D FI+ A Sbjct: 113 PLLKGEMIGAFALTEPNAGSDAGNQQTTAKLVGD-YYILNGSKIFITNGGVADVFIVFAM 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + G + + + S G + + K+G R ++T EL F + + N+ Sbjct: 172 TDKSKGTKGISAFIVEKSFEGFKIGKPEKKMGIRGSSTTELIFEDC---KVPKENLLGSE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 KI L LD + V + +AE + Y + R G + ++ IAD+ Sbjct: 229 GMGFKIALQTLDGGRIGVGAQALGIAEGAIDEVLRYVKERKQFGKSIGSFQGIQWYIADM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 AA L + A D+ S +AA A K + +A V +A++ GG Sbjct: 289 ITKTRAAKLLVYDAAIKKDKGILTSADAAMA-------KKYASDVAMEVTTQAVQIFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY + + R R++ I G+ Sbjct: 342 GYTRDYPVERMMRDAKITQIYEGT 365 >gi|319795898|ref|YP_004157538.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gi|315598361|gb|ADU39427.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 382 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255 + +TE G+D+ + ++ +K DG Y ++G K F+++ +++ +G G Sbjct: 126 IAMTEPGAGSDLQGVRTRAEK-KDGGYLINGSKTFITNGYLAGLVLVVCKTDPAQGAKGT 184 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 ++ ++E G R+ +KIG ++ T EL F + LLG G + M Sbjct: 185 SIL--IVETEGCKGFRVGRVLDKIGMKAQDTSELFFDDVRVPADALLGGQE-GQGFFQLM 241 Query: 313 KILIYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L Y + I+ VS M + + Y R R G + + K +A+IA I Sbjct: 242 SDLPY-ERTIIGVSALAAMEGAYEATLDYVRDRKAFGKPIAEFQNTKFKLAEIATQIKVG 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A R D R + A A + K W + V+ E ++ GG GY+ E Sbjct: 301 RAFIDRCVE--DLVAGRLDTAT-----ASMAKLWGTEAQGRVMDECVQLFGGYGYMNEYM 353 Query: 430 IARHYRESPANSILLGSGNAM 450 +AR Y ++ I G+ M Sbjct: 354 VARMYADARVQRIYGGTNEIM 374 >gi|239945420|ref|ZP_04697357.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239991882|ref|ZP_04712546.1| putative acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291448876|ref|ZP_06588266.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291351823|gb|EFE78727.1| acyl-CoA dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 401 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 45/280 (16%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AI+S+G K D Y L+G K +L++ + + + EG + Sbjct: 135 GSDVSAISSKGVKDGDE-YVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED---- 311 L + P GL +K+G + T EL ++ DL + V Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDDLRIPANRVLGGTTG 245 Query: 312 ---MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 +++ ++ ++V+ +A+ + YA++RH G + ++ +A++A Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMA 305 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA A+ A D + EA A KY + V+ +A GG G Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 + +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|10639438|emb|CAC11440.1| acyl-CoA dehydrogenase (SHORT-CHAIN SPECIFIC) related protein [Thermoplasma acidophilum] Length = 397 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 53/317 (16%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 ++AL K + K+FS +A M GL +TE GG+D+A I + K Sbjct: 115 VIALFGNDDQKKKYLSKVFS------GQAKM-------GLAVTEPGGGSDVANIKTTAVK 161 Query: 221 ISDGIYCLSGHKWFLSS-PMSDAFIMLAQ--VEGR----VGCFLVPRLLEDGSPNGLCYQ 273 D Y L+G K F+++ ++D F++LA+ VE + + F+V R +G Sbjct: 162 EGDH-YVLNGSKMFITNGDIADFFVLLARTSVEKKKHQGMSVFIVERNF-----DGFKSN 215 Query: 274 RLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSL 332 ++ K+G R+ T EL N + N+ P I+ + D + V+ + + Sbjct: 216 KIHGKLGVRATDTAELTLENV---KVPAENLVGEPGRGFYYIMTFFDISRAYVAAQALGI 272 Query: 333 AEAIHYARRRHV----SGGILIDQPV-MKRAIADIALDIAAATALSFRLAN---SFDEAK 384 AE I R V G + QP ++ AIAD+A I AA L++ A+ +F+ Sbjct: 273 AEGIL---ERAVGILQKDGPITSQPERVQFAIADMATRIEAAKLLTYEAASFIFNFNPNP 329 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 + + + K + + A V +AME G G +I R +R++ I Sbjct: 330 A----------VTSMAKAYAAETAVYVSRKAMEITGIDGL--SSNIERSFRDAKIMEIWE 377 Query: 445 GSGNAMVLDVLNLLEKG 461 G+ L + +L+ G Sbjct: 378 GTSEIEKLVIARMLKVG 394 >gi|89896113|ref|YP_519600.1| hypothetical protein DSY3367 [Desulfitobacterium hafniense Y51] gi|89335561|dbj|BAE85156.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 591 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 40/346 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVP 259 LTE G+D + ++G Y L+G K F+++ +D F++ A+VEG++ F+V Sbjct: 148 LTEPGSGSDALGAKATAVLNAEGTHYLLNGTKQFITNAGFADIFLVYAKVEGKLTNFIVE 207 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 R + GL + + K+G + ++T ++ + ++G+L G V IL Sbjct: 208 RTMP-----GLSFGPEEKKMGIKGSSTRQVILEDVAVPVENIVGELG--RGHVVAFNILN 260 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 A ++ +++L + YA R G L ++ A+IA A ++ + Sbjct: 261 VGRFKLAAAAIGSAQLALEVTLKYAGERKQFGVPLSSFGAIQTKFAEIAAQTYLAESVVY 320 Query: 375 RLANSFDEA--------KSRSEEAA----YARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 R A +EA R E YA I + K ++ + E ++ GG Sbjct: 321 RTAGLMEEACQDLDVTGDCRKEAGKAIEEYA-IECSLNKVLASEVLDLAVDEGVQIHGGY 379 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKK 482 G+I E I R YR+S N + G+ ++ LL GT L ++ S E L ++ K Sbjct: 380 GFIAEYPIERMYRDSRINRLFEGTN-----EINRLLVPGT-LLKRAMSG-ELPLLAAAKN 432 Query: 483 VITILRDSISLCKEDKGLARFLT-----EKIALASSAAALYRAGMN 523 V L S L E++GLA L +K+ L ++ A GM Sbjct: 433 VSKDLM-SAGLGSEEEGLAALLNMTQKAKKLCLMAAGIAAQNLGME 477 >gi|320451517|ref|YP_004203613.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] gi|320151686|gb|ADW23064.1| acyl-CoA dehydrogenase [Thermus scotoductus SA-01] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 36/272 (13%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-------GR 252 GLTE G+D AA+ ++ + +S G Y L+G K F++ ++ ++++A+ + Sbjct: 129 GLTEPGSGSDAAALKTRAEPVSGG-YVLNGTKQFITQGSVAGVYVIVARTDPAPSPERKH 187 Query: 253 VG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 +G F P GL R + K+G ++ T +L + F LLG+ Sbjct: 188 LGISAFAFFRPE-------TGLRIGRKEEKLGLNASDTAQLVLEDLFVAEDSLLGERG-- 238 Query: 306 TGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + +K+L + A M+V R +L A+ YA++R G + + + +A+ A Sbjct: 239 KGFYDVLKVLDGGRIGIAAMAVGLGRAALDYALRYAKQREAFGRPIAEYQGVSFKLAEAA 298 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++ AA L + A D + + EAA A++ A C EA++ +GG G Sbjct: 299 TELEAARLLYLKAAELKDGGRPYTLEAAQAKLFASEVAVKACD-------EAIQILGGYG 351 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL 455 YI++ + R++R++ I G G + +L ++ Sbjct: 352 YIKDYPVERYWRDARLTRI--GEGTSEILKLV 381 >gi|262278711|ref|ZP_06056496.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262259062|gb|EEY77795.1| isovaleryl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPKAGAKGMTAFLVEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + + Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYSAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|192290201|ref|YP_001990806.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283950|gb|ACF00331.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D + L+G+K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A V M+ + + Y R G + +++ +AD+ + + A+ A Sbjct: 250 ERAVL----AAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A C +A++ +GG+GYI + Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|146303057|ref|YP_001190373.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701307|gb|ABP94449.1| acyl-CoA dehydrogenase domain protein [Metallosphaera sedula DSM 5348] Length = 356 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 24/271 (8%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSS 237 + R+ D T K K + L+E G+D +A+ S +K+ +G + + G K W Sbjct: 88 YGRDNDLTEKIAEGK--ILGSFALSEPCCGSDTSAMRSTARKV-NGTWKIDGEKMWITQG 144 Query: 238 PMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTF 295 ++ F++ A+ EG++ FLV + C +R K ++ GNR T + + Sbjct: 145 LYANVFLVAAKNDEGKISAFLVR--------DTRCMEREKIEVQGNRGTGTARIRMNECE 196 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVM 355 G L+G V + +I I S +++ M EA ++A+ R G L++ + Sbjct: 197 GELIGGWEVIKYALAIGRIAISAISLGLALGAME----EAYNWAKERQAFGKRLMEHEGI 252 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 +D ++ + AL N+F + R+E + K +A V+ Sbjct: 253 AWLFSDSIAELESVKALLDATCNAFTKDWKRAEP------LISSLKLISSGVANRVVDRM 306 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ +GG GY + + R YR+ I G+ Sbjct: 307 VQVMGGMGYAKLTRVERAYRDVRLTRIGEGT 337 >gi|116048661|ref|YP_792539.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|115583882|gb|ABJ09897.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383 >gi|302344432|ref|YP_003808961.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301641045|gb|ADK86367.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 607 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 54/301 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSSPMSDA-----FIMLAQVEGR 252 LTE G+D+ A ++ K + IY + G K F+S D ++LA++EG Sbjct: 167 LTEPDAGSDVGAARTKAVKDTSSDDPRIYFIEGVKRFISCGDHDMTENVIHLVLARIEGD 226 Query: 253 ------VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + F+VP++ + G PN + +++K+G ++T L F G + Sbjct: 227 PEGTKGLSLFIVPKIWVNPDGSLGEPNDVFTAGIEHKMGVHGSSTCTLNFGENGKCRGII 286 Query: 299 LGDLNVSTGPVEDM-KILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQ 352 LG+ P M K+ ++ A + + LA + + YA+ R V ID+ Sbjct: 287 LGE------PRTGMPKMFQMMNEARLGCGMQALGLAASAYDSARIYAKER-VQSAPFIDR 339 Query: 353 -----PVM-----KRAIADIALDIAAATALSFRLA-------NSFDEAKSRSEEAAYARI 395 P++ +R + + A AL F++ N DE K+R E A + Sbjct: 340 RGKAVPIIQHEDVRRMLMNGKSVTEAVRALLFKIGYLTDIAENDPDEEKARHAEH-LADL 398 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + VI ++++ +GG GY E + ++ R+ SI G+ LD++ Sbjct: 399 LLPIAKSYASDKGFEVIRDSIQAMGGVGYCSEFPVEQYARDMKIISIWEGTNYIQALDLI 458 Query: 456 N 456 Sbjct: 459 G 459 >gi|182435009|ref|YP_001822728.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775525|ref|ZP_08234790.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|178463525|dbj|BAG18045.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655858|gb|EGE40704.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 28/261 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVG--CF 256 LTE G+D AA+ ++ + D Y L+G K F+S + S +I+LA+ +G G F Sbjct: 127 LTEPGAGSDAAALRTRAVRDGD-HYVLTGTKQFISGAGASHLYIVLARTGDDGPRGISAF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 LV R GL + + K+G + T V L G G ++ + Sbjct: 186 LVER-----DDPGLSFGPDEKKMGWNAQPTRQVLLDGVRLPADRLLGEEGGGFRIAMNGL 240 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ I A S+ G + +L ++ + R G L+D ++ +A++A ++AAA Sbjct: 241 NGGRLGI----AACSLGGAQSALDRSLAHLADREAFGARLLDAQALQFRLAEMATELAAA 296 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL + A + D A A + + K++ +V A++ GG GY+ E Sbjct: 297 RALVRQAAEALD------RNVAGAPQLCAMAKHFATDTGYSVADRALQLHGGYGYLAEYG 350 Query: 430 IARHYRESPANSILLGSGNAM 450 I + R+ + IL G+ M Sbjct: 351 IEKIVRDLRVHQILEGTNEIM 371 >gi|260554589|ref|ZP_05826810.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260411131|gb|EEX04428.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS----PMSDAFIMLAQVEGRVG--C 255 LTE G+D +AI + ++ D + L+G K F++S ++ F + + G+ G C Sbjct: 33 LTEPHVGSDASAILCKAERDGDH-WVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGISC 91 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN--ATVELE-----FSNTFGFLLGDLNVSTGP 308 FLVP + G R+++K+G ++ AT+ LE N G ++ Sbjct: 92 FLVPT-----NTPGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSN 146 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + +I I A SV R + A+ YA R G L+ + +AD+A I A Sbjct: 147 LAAGRIGI----AAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEA 202 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+ A D +EA+ A++ A MA V ++A++ GG GY+ + Sbjct: 203 AHQLALHAATLKDAGLPCLKEASMAKLFAST-------MAERVCSDAIQIHGGYGYVSDF 255 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ + I G+ + Sbjct: 256 PVERIYRDVRVSQIYEGASD 275 >gi|163742750|ref|ZP_02150135.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161384005|gb|EDQ08389.1| acyl-CoA dehydrogenase [Phaeobacter gallaeciensis 2.10] Length = 401 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 21/266 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ K ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 144 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTV 202 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +EDG+ GL + L+ K+G +S T +++F + L+G+ G MK L Sbjct: 203 --YVEDGTA-GLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGE--EGKGFTYAMKGL 257 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L+ A S+ + +L + Y R G + ++ +AD+ +++ AA Sbjct: 258 DGGRLNIASCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFL 317 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D+ A A + K + + V+ + ++ GG GY+ + I + Sbjct: 318 RQAAWKLDQG------APDASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKL 371 Query: 434 YRESPANSILLGSGNAM-VLDVLNLL 458 R+ + IL G+ M V+ +LL Sbjct: 372 VRDLRVHQILEGTNEIMRVITARHLL 397 >gi|324512342|gb|ADY45116.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum] Length = 411 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 31/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253 +TE G+D+AAI ++ +K D Y ++G K W + F +LA+ E GR Sbjct: 145 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRA 203 Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V DG G+ + + +G R + T + F + ++ NV P Sbjct: 204 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 255 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + D+ V+ V LA EA YA R G + + +AD+A+++ Sbjct: 256 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 315 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A +++R A D E ++Y A I K + A A A++ +GG+G+ Sbjct: 316 ELARLVTYRAAVDVDN----KERSSY---YASIAKCFAADTANITAANAVQILGGNGFNI 368 Query: 427 ERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 369 EYPVEKLMRDAKIYQIYEGT 388 >gi|302342985|ref|YP_003807514.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301639598|gb|ADK84920.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 606 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 40/293 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252 LTE G+D+ + ++ D IY + G K F++ M D I +LA++EG Sbjct: 166 LTEPDAGSDVGDLLTKATPDPDAGDPRIYKIEGSKRFITCGRHDMVDVIIHLVLARIEGA 225 Query: 253 ------VGCFLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF---GFL 298 + F+VP + EDGS N + +++K+G +AT L F G L Sbjct: 226 PKGTKGISLFIVPTKWVNEDGSIGEDNDVFCTGIEHKMGIHGSATCSLSFGENGKCRGIL 285 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ-----P 353 LG+ N + M + + + + + A+ YA+ R V G +D+ P Sbjct: 286 LGEPNSGMAKMFQMMNEARIGCGVQANAAAAAAYDAALQYAKER-VQGPPFVDRSKPRVP 344 Query: 354 VM-----KRAIADIALDIAAATAL------SFRLANSFDEAKSRSEEAAYARIMAPITKY 402 ++ +R + ++ AA A+ +A++ + + R + +M P+ K Sbjct: 345 IIQHEDVRRMLMNLKAGTEAARAMIAYNFWMVDVAHNDPDPEVRKAMGMRSELMTPLLKS 404 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + M + +AM+ +GG GY E I +HYR+ SI G+ LD++ Sbjct: 405 YITDMGAQLCRDAMQILGGVGYCAEFPIEQHYRDIKILSIWEGTNFIQSLDLV 457 >gi|254245003|ref|ZP_04938325.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192] gi|126198381|gb|EAZ62444.1| hypothetical protein PA2G_05882 [Pseudomonas aeruginosa 2192] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383 >gi|326384231|ref|ZP_08205913.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197096|gb|EGD54288.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 386 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K F++S + F++ A G G V Sbjct: 128 LAITEPSGGSDVGHLRTTAVRDGDH-YVVNGAKTFITSAVRADFVVTAVRTGGPGAAGVS 186 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G+P G R +K+G RS+ T EL F++ L+G N + + Sbjct: 187 LLVIEKGTP-GFEVARKLDKMGWRSSDTAELSFTDVRVPVDNLVGAENSGFAQIAQAFVT 245 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAATALS 373 A + + + L + + R R G LI + ++ ++ ++A +D+A S Sbjct: 246 ERASLASQAYASAQRCLDLTLEWVRNRETFGKPLIARQSVQDSVTEMARRIDVARTYTRS 305 Query: 374 F--RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 R +S D+ + E +A+ A W +A++ GG GY+ E + Sbjct: 306 VVERRVSSGDDLIA---EICFAKNTAVEAGEWVAN-------KAVQLHGGMGYMRESEVE 355 Query: 432 RHYRESPANSILLGSGNAMVL 452 R YR+ I +G G +L Sbjct: 356 RQYRD--MRIIGIGGGTNEIL 374 >gi|322791487|gb|EFZ15884.1| hypothetical protein SINV_11461 [Solenopsis invicta] Length = 414 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 20/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D ++ ++ +K+ Y ++G K W +S ++ F++ A + G + Sbjct: 157 LTEPGSGSDAFSLKTEARKVG-AEYVINGTKMWISNSDIAQIFLVFANADPSAGYRGITT 215 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL----NVSTGPVEDMK 313 L D GL + ++K+G R++ T + F + G LLG + G + + + Sbjct: 216 FLVDRDTPGLTVDKPEDKMGIRASGTCMVHFDDVKIPEGNLLGKFGHGYKYAAGFLNEGR 275 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 I I + + L I Y R G + ++ IA ++ A L Sbjct: 276 IGI----GAQMIGAAQGCLDATIPYTLDRKQFGQDIFSFQSLQHQIAQAVTELQCARLLV 331 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A + K +EAA A K++ + A + A+ ++ +GG G+ + ++ Sbjct: 332 YNAARLVEAKKDFMKEAAMA-------KFFASETACRITAKCIDFMGGVGFTTDFPQEKY 384 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 YR+ +I G+ N + + + K Sbjct: 385 YRDVKIGTIYEGTSNIQLSTIAKCIRK 411 >gi|256059341|ref|ZP_05449543.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] Length = 333 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE + G+D +A+ ++ + D Y + G K F++S S+ I+ A + G Sbjct: 78 GFALTEPQAGSDASALKTRARLDGDH-YVIDGSKQFITSGKNSNVAIVFAVTDPAAGKKG 136 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G +++K+G S+ T L F+N G ++ Sbjct: 137 ISAFIVPT-----DTPGYEVMSVEHKLGQHSSDTCALGFTNMRVPVENRLGAEGEGYKIA 191 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YAR R G +I+ + +AD+A Sbjct: 192 LANLEGGRIGI----AAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATR 247 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + A + K EA+ A+++A +MA V + A++ GG GY+ Sbjct: 248 IETARQMVLHAAALREAGKPCLTEASMAKLVAS-------EMAEQVCSAAIQIHGGYGYL 300 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 + + R YR+ I G+ + L Sbjct: 301 ADYPVERIYRDVRVCQIYEGTSDVQRL 327 >gi|167576795|ref|ZP_02369669.1| acyl-CoA dehydrogenase [Burkholderia thailandensis TXDOH] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLA-----QVEGRV 253 L +TE GG+D+AA+ + I DG Y ++G K F++S + + +A G Sbjct: 130 LAITEPGGGSDVAAL--RASAIRDGDHYVVNGEKVFITSGIRADYYTVAVRTDPHARGAK 187 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 G L LL +G GL LK K+G ++ T L F + + G + Sbjct: 188 GLSL---LLVEGDTAGLSKTPLK-KMGWWASDTAHLRFDDCRVPAANRIGPEGGGFPLVM 243 Query: 314 ILIYLDSAIMSVSGM---RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ ++ S + +V +A+ +AR+R G + D V++ + D+A+ I A Sbjct: 244 QNFNLERFSLAASALGFAQVCYDDALDWARQRRTFGQRVADHQVIRHTLVDMAMRIGATR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + A D A R+ A A I + K + + A++ +GG GY+ Sbjct: 304 AWLEQCAWQMDHADGRA-PALVATIC--MLKNFATQTMQFCADAAVQILGGMGYMRGTRP 360 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 361 ERIYREVKVNMIGGGAQEIM 380 >gi|114799465|ref|YP_759820.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444] gi|114739639|gb|ABI77764.1| acyl-CoA dehydrogenase [Hyphomonas neptunium ATCC 15444] Length = 396 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 31/266 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGR 252 LGLTE GTD+ +I + ++ D Y ++G K ++S+ + + L AQ + Sbjct: 125 LGLTEPDAGTDLQSIRTVAKRKGDK-YVVNGTKTWISNAIEGHCVALLVKTDPDAQPRYK 183 Query: 253 -VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVE-----LEFSNTFGFLLG 300 + +VP++ + G NG ++L K + E E S G Sbjct: 184 GMSMLIVPKINPETRAPLPGVKNGRKLEKLGYKGIDSGEFIFEDYECDAELSLVGGKEGE 243 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 ++TG +E +I + A SV R +L E++ Y++ R G + + ++ + Sbjct: 244 GFFMATGGLEIGRINV----AARSVGIARRALRESVQYSQLRKTMGKPICEHQAIQLKLG 299 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++A A+ L A ++D EA A KY+ + A V EAM G Sbjct: 300 EMAAKTRASELLVQDAAAAYDRGDRVDMEAGMA-------KYFASETAVEVATEAMRIHG 352 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY +E I R YR++P I G+ Sbjct: 353 GYGYSKEYVIERLYRDAPLMCIGEGT 378 >gi|56697235|ref|YP_167600.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56678972|gb|AAV95638.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 388 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 28/266 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ I + + DG Y +SG K F+++ +++ I+ A+ E +VG Sbjct: 129 IAMTEPGAGSDLQNIKTTA--VKDGNHYRISGSKTFITNGALANMIIVAAKTEPKVGGRG 186 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG--------- 307 + L+E G R +K+G +SN T EL F + L G Sbjct: 187 ISLFLVETDGLEGFRRGRNLDKLGMKSNDTSELFFDDMRVPASALLGAEEGQGFVQMMQQ 246 Query: 308 -PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 P E + I +Y + I V +RV+L +Y R G L D + +A+ A + Sbjct: 247 LPQERLLIGVYAVARIERV--LRVTL----NYVAERSAFGKKLADFQNTQFVLAECATE- 299 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A +F D S E A + KYW + +I ++ GG G + Sbjct: 300 -ATIAKTF-----LDACISEHLEGNLTTEKASMAKYWLTDLQAKIIDRCLQLFGGYGVMS 353 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 E + R YR++ I G+ M L Sbjct: 354 EYPMERMYRDNRIERIYAGTNEIMKL 379 >gi|58262848|ref|XP_568834.1| acyl-CoA dehydrogenase, long-chain specific precursor [Cryptococcus neoformans var. neoformans JEC21] gi|134108452|ref|XP_777177.1| hypothetical protein CNBB4080 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259862|gb|EAL22530.1| hypothetical protein CNBB4080 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223484|gb|AAW41527.1| acyl-CoA dehydrogenase, long-chain specific precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 522 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 33/265 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCF 256 I L ++E G+D+A + + K DG + ++G K ++S M SD F + A+ EG + F Sbjct: 253 ISLAISEAFAGSDVAGLRTTATKQEDGSWVINGTKKWISGGMHSDYFTVGAKTEGGLTVF 312 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 LVPR G+ +++K + + T + F N + N+ GP ED +L+ Sbjct: 313 LVPRT------EGVETKQIKTSY-STAAGTAYITFDNV---KVPAENM-LGP-EDGGLLV 360 Query: 317 YLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L + S+ RV + E + + +R V G L+ Q V++ +A + + A Sbjct: 361 ILSNFNHERWVMCCASIRSSRVIVEECLKWGAQRRVFGKPLLAQAVIRAKLASMIAKVEA 420 Query: 369 ATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 A +++++ N + +SR+ A + T++ A + +A+ GG G Sbjct: 421 MQAWLENVTYQMCNMSYKEQSRNLAGQIAFLKMQSTRF-----AGEIADDAVNIFGGRGL 475 Query: 425 IEE---RSIARHYRESPANSILLGS 446 + + + + R ++IL G+ Sbjct: 476 TKTGMGKFVEQFQRTQKFDAILGGA 500 >gi|317121737|ref|YP_004101740.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885] gi|315591717|gb|ADU51013.1| Butyryl-CoA dehydrogenase [Thermaerobacter marianensis DSM 12885] Length = 608 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 23/263 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLV 258 LTE G+D ++ DG Y L+G K W +S + F++ A+V+G ++ F+V Sbjct: 163 LTEPDAGSDALGGKTRAVLSPDGKHYILNGQKQWITNSGFAHVFVVYAKVDGDKMTAFIV 222 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKIL 315 R G+ K+G + ++T L E +LG++ ++ + Sbjct: 223 ERDFP-----GVSVSEEVRKMGIKGSSTRMLYLNEVPVPVENVLGEVGKGHHIAFNILNI 277 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A ++ + +A A YA+ R G + P++++ +A +A+ A A+ +R Sbjct: 278 GRWKLAAGNLGACKELIALATRYAQGRKQFGQPIATFPLIQQKLAAMAVRTYALEAMVYR 337 Query: 376 LANSFDEA----------KSRSEEAAYAR--IMAPITKYWCCKMAPAVIAEAMECIGGSG 423 A +FD + R AA + + A I K + + V+ EA++ GG G Sbjct: 338 TAGAFDASLREIDGDAPDAGRQAIAAISEYAVEASINKVFGSETLDFVVDEAVQIHGGYG 397 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y++E + R YR++ N I G+ Sbjct: 398 YMQEYEVERAYRDARINRIFEGT 420 >gi|260554164|ref|ZP_05826423.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260404706|gb|EEW98217.1| isovaleryl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G +K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|295836729|ref|ZP_06823662.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] gi|197697599|gb|EDY44532.1| acyl-CoA dehydrogenase [Streptomyces sp. SPB74] Length = 385 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 33/270 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251 + +TE G+D+A + + + +DG Y L+G K F++ + +D I+ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSADGRHYVLNGAKTFITGGVHADRVIVCARTAPPKEDDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS--- 305 R G L L+ D G R +K+G +++ T EL F++ LLG+ N Sbjct: 184 RFGISL---LVVDTKSEGYAVGRKLDKLGLKTSDTAELSFTDVQVPVADLLGEENKGFHY 240 Query: 306 ---TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 P E + I + + V A++ Y + R V G + K +A Sbjct: 241 LGQNLPQERLGIA----VGAYAQAAAAVRFAQS--YVQDRTVFGKPVAAFQNTKFELAAC 294 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ AA A+ R + D + + EAA A++ +C ++A VI ++ GG Sbjct: 295 KAEVDAAEAVCDRALEAHDLGELTAAEAASAKL-------FCTEVASRVIDRCLQLHGGY 347 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL 452 GY+ E IAR Y ++ N I G+ M + Sbjct: 348 GYMNEYPIARLYADNRVNRIYGGTSEVMKM 377 >gi|254428961|ref|ZP_05042668.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196195130|gb|EDX90089.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 385 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 23/258 (8%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA 247 P T IG LTE G+D A+ ++ +K D Y L+G K F+++ P + F ++A Sbjct: 111 PQLATGEVIGAFCLTEPDVGSDSGAVKTRAEKDGDH-YILNGTKRFITNGPHAGLFTVMA 169 Query: 248 QVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303 + + G V + DG G+ + K+G + T ++ F N ++G Sbjct: 170 RTNPDIPGGGGVTAFIVDGDTPGIHRGKADVKMGQKGAHTCDIIFENCRVPAENIIGGQE 229 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRA 358 G MK+L D + +S + V +A +A++++ R G +I+ +++ Sbjct: 230 -GKGFKTAMKVL---DRGRLHISAICVGVAYRLIEDAVNFSAERKQFGKPIIEHQLIQAM 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD + A ++ A S D + S +A+ K +C +M V A++ Sbjct: 286 LADSRAEAFAGRSMVLEAARSKDRGERVSLDAS-------CCKLFCSEMVGRVADRAVQI 338 Query: 419 IGGSGYIEERSIARHYRE 436 GG+GY+ + + R YR+ Sbjct: 339 HGGAGYMADYPVERFYRD 356 >gi|194741824|ref|XP_001953387.1| GF17739 [Drosophila ananassae] gi|190626446|gb|EDV41970.1| GF17739 [Drosophila ananassae] Length = 418 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 28/267 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A ++ K+ Y L+G K W +S + ++ A V+ + + Sbjct: 159 LSEPGNGSDAGAASTTA-KLEGDSYLLNGTKAWISNSKEASGGLVFATVDKSLKHKGITA 217 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST-----GPVEDMKIL 315 L + GL + ++K+G R+ +T +L +L D+ V P + KI Sbjct: 218 FLTEKDVPGLSIAKKESKMGMRATSTCQL--------VLEDVQVPRSRVLGNPGDGFKIA 269 Query: 316 IY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ +A+A + Y+++R G L ++++ +AD+A + A+ Sbjct: 270 MQSLDCGRIGIAAQATGIAQAALELAVDYSQKRIAFGKQLARMQLIQQKLADMASRVEAS 329 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++R A D ++EAA A++ A +C + ++ +GG GY + Sbjct: 330 RLLTWRAAWLKDNGLPFTKEAAMAKLHASEAATYCSH-------QCIQVLGGMGYTTDLP 382 Query: 430 IARHYRESPANSILLGSGNAMVLDVLN 456 +YR S I G+ + + N Sbjct: 383 AELYYRNSRVTEIYEGTSEIQRIVIAN 409 >gi|300785222|ref|YP_003765513.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299794736|gb|ADJ45111.1| isovaleryl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 26/280 (9%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSP 238 +RE M V + LTE GG+D+ A+ + ++ + Y + G K W ++ Sbjct: 101 TREQQERYLPRMATGEVRATMALTEPGGGSDLQALRTTARRAGES-YVVDGAKTWITNAR 159 Query: 239 MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN 293 S +L + + G ++ L E G+ G R K+G + + EL FS+ Sbjct: 160 RSQLVALLCKTDPHAEPAHAGISIL--LAEKGA--GFHVSRDLPKLGYKGVESCELSFSD 215 Query: 294 ---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 G LLG G + M+ L + A ++ R +LA+++ YA+ R G Sbjct: 216 FRVPVGALLGG-EEGRGFAQMMRGLEIGRIQVAARALGVGRAALADSLRYAQERETFGKP 274 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 + + +AD+A + AA L A +D A A + A + K + + A Sbjct: 275 IWQHQSVGNLLADMATKLEAARQLVHHAARRYD-------SGARADLEAGMAKLFASETA 327 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A+ GG GY E + R++R++P +++G G Sbjct: 328 MEIALNAVRVHGGYGYSTEFDVERYFRDAPL--MIVGEGT 365 >gi|298249540|ref|ZP_06973344.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963] gi|297547544|gb|EFH81411.1| Butyryl-CoA dehydrogenase [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 23/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + ++ D Y L+G K W + + I+ A ++ + + Sbjct: 125 LTEINAGSDAASMETTAREEEDS-YVLNGEKIWITNGLSATTTIVFATLDRGLRHKGICA 183 Query: 261 LLEDGSPNGLCYQRLKNK-IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI 316 L +G+P G + NK +G+R++ + F LLG+ + Sbjct: 184 FLLEGNPPGCQRDPMPNKELGHRASEHARITFKECRVPRSALLGEAGQGFAIA-----MS 238 Query: 317 YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ + V+ V +A+A + Y R+R G L D +++ +AD+A DI AA Sbjct: 239 ALECGRIGVASGAVGIAQACLDACVDYTRQRRQFGQRLADFQMLQGTLADMAADIEAARL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++R A + K R A A I K + + A +EA+ G GY E + Sbjct: 299 LTYRAAWT----KDRDLPATRA---TSIAKLFATEAAMRAASEAVLLHGNRGYSNEYPVE 351 Query: 432 RHYRESPANSILLGS 446 RHYR+ I G+ Sbjct: 352 RHYRDIKGLQIYEGT 366 >gi|229488857|ref|ZP_04382723.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229324361|gb|EEN90116.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 389 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 16/262 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 G LTE G+DIA++ + ++ DG + LSG K ++S+ +D ++ A+ + G Sbjct: 126 GFALTEPDAGSDIASMRTVARREDDG-WHLSGSKTYISNAKEADLVVLFAKTDPSAGFRG 184 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+VP+ G+P G+ Y ++K+G RS T + + L D + T Sbjct: 185 ITAFVVPK----GTP-GISYSEPQDKMGIRSAPTYTVYLDDV--VLPLDSVIGTEGRGGN 237 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L+ A + V+ M +A R + + P+ + L A + Sbjct: 238 IALTALNRARIDVAAMANGIALRAWELGREYATERKQFGTPIFDFQAIQLLLGGCDAQLV 297 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R+ + D A + R A I+KY + +++ + ++ GG+G++ E I R Sbjct: 298 TSRV--TADWAADVKDAGQDIRRAASISKYVATEACFSIVDQTVQIHGGAGFMRESEIER 355 Query: 433 HYRESPANSILLGSGNAMVLDV 454 YR+ I G+ +L + Sbjct: 356 LYRDCRILRIFEGTSQIQLLTI 377 >gi|71065461|ref|YP_264188.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] gi|71038446|gb|AAZ18754.1| putative acyl-CoA dehydrogenase [Psychrobacter arcticus 273-4] Length = 386 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ ++ K + Y L+G K F+S S +++ G G + Sbjct: 124 LTEPNAGSDAASLRTKADKQGE-YYVLNGEKTFISGAGSTDVLVVMARTGGAGPKGISAF 182 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKI 314 + D G+ Y + ++K+G ++ T + F N G ++ ++ +I Sbjct: 183 VVDADSAGIEYGKNEHKMGWKAQPTRTISFKDVKVPVENLIGEEGQGFRIAMKGLDGGRI 242 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I I +V + +L A +Y + R G + ++ +AD+ A + + Sbjct: 243 NI----GICAVGTAQAALETATNYVQERSQFGSPIASLQSVQFKLADMLTQTITARQMLY 298 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A+ D + + + Y + ++ C +A EA++ GG GY+ E + RH Sbjct: 299 LAASKVD--NNDVQASTYCAMAKRLSTDLCFDVAN----EALQLHGGYGYLNEYPLERHV 352 Query: 435 RESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 353 RDLRVHQILEGTNEIM 368 >gi|226308521|ref|YP_002768481.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187638|dbj|BAH35742.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 389 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 21/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG------ 251 + +TE G+D+A I + +DG Y L+G K F++ ++D +++ + Sbjct: 124 IAMTEPGTGSDLAGIRTSATLSADGSHYILNGAKTFITGGVLADRVLVVCRTSPAPSDNR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R+G + L D + G R +KIG ++ T EL FS+ G LLG+ + Sbjct: 184 RLGLSI---LSVDTTSEGYQVGRKLDKIGMHASDTAELSFSDVRVPVGDLLGEEGQAFSY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + D I L + S + ++ AI Y R V G + K +A+ A + A Sbjct: 241 LGDNLIRERLGIGVESAATAAAAIQFAIDYTTARTVFGSPVSAFQNTKFVLAECAAEQTA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + FD + + +AA ++ + ++A V+ + ++ GG GY+ E Sbjct: 301 AQTLVDKAVELFDIGELTAADAAEVKL-------FTTEVAARVVDKCLQLHGGYGYMREY 353 Query: 429 SIARHYRESPANSILLGS 446 IAR Y ++ + I G+ Sbjct: 354 PIARLYTDTRVSRIYGGT 371 >gi|163736604|ref|ZP_02144023.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] gi|161390474|gb|EDQ14824.1| acyl-CoA dehydrogenase-like protein [Phaeobacter gallaeciensis BS107] Length = 381 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 20/257 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ K ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVSTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 +EDG+ GL + L+ K+G +S T +++F + L+G+ G MK L Sbjct: 183 --YVEDGTA-GLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGE--EGKGFTYAMKGL 237 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L+ A S+ + +L + Y R G + ++ +AD+ +++ AA Sbjct: 238 DGGRLNIASCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFL 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + A D+ A A + K + + V+ + ++ GG GY+ + I + Sbjct: 298 RQAAWKLDQG------APDASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKL 351 Query: 434 YRESPANSILLGSGNAM 450 R+ + IL G+ M Sbjct: 352 VRDLRVHQILEGTNEIM 368 >gi|86138907|ref|ZP_01057479.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193] gi|85824554|gb|EAQ44757.1| glutaryl-CoA dehydrogenase [Roseobacter sp. MED193] Length = 406 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K + G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 148 FGLTEPDAGSDPAGMKTRAEKTATG-YKLTGSKMWISNAPIADVFVVWAKSEEHGGKIRG 206 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL +++NK R++ T E+ LL + GP Sbjct: 207 FVLEKGMK-----GLSAPKIQNKASLRASITGEIVMDGVEVGEDALLPHVQGLKGP---- 257 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AEA +A R R G L + + + +A++ +I Sbjct: 258 --FGCLNRARYGISWGAMGAAEACWHAARQYGLDRTQFGRPLANTQLFQLKLANMQTEIT 315 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DEA + E M I K C A + A + GG+G E Sbjct: 316 LGLQSSLRVGRLMDEANAAPE-------MISIVKRNNCGKALEIARNARDMHGGNGISLE 368 Query: 428 RSIARH 433 ++ RH Sbjct: 369 FNVIRH 374 >gi|323490855|ref|ZP_08096053.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] gi|323395463|gb|EGA88311.1| Acyl-CoA dehydrogenase [Planococcus donghaensis MPA1U2] Length = 378 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 56/311 (18%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLG---LTEKRGGTDI 211 SV + ++ + ++ K + PK+ S EY LG LTE G+D Sbjct: 91 SVGTNPILNFGSQQQIEK-YVPKLASGEY----------------LGAFCLTEPAAGSDA 133 Query: 212 AAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 ++ ++ + DG Y ++G K F+++ +D +I+ A + G + + + G Sbjct: 134 GSLKTKA--VLDGEDYVINGSKVFITNGGAADTYIVFASTKPSAGSRGISAFIVEKDTPG 191 Query: 270 LCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKIL 315 L + + K+G + TV+L F N F + +LNV +I Sbjct: 192 LIIGKNEKKMGLHGSKTVQLTFDNMRVPAENLLGEENKGFSIAMANLNVG-------RIG 244 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 I A ++ + A+ YA+ R G + Q + +AD+A + A+ L + Sbjct: 245 I----AAQALGIAEAAYEYAVAYAKEREQFGKPIAHQQGVGFKLADMATQVEASKLLVYN 300 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A+ + + K ++EA+ A++ A K A V EA++ GG GY ++ + R +R Sbjct: 301 AADLYSKGKDCNKEASMAKLFA-------SKTAMDVTIEAIQVFGGYGYTKDYPVERLFR 353 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 354 DAKVTEIYEGT 364 >gi|15595943|ref|NP_249437.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|218893310|ref|YP_002442179.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|296390906|ref|ZP_06880381.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|313105566|ref|ZP_07791832.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|9946632|gb|AAG04135.1|AE004509_10 probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1] gi|218773538|emb|CAW29351.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|310878334|gb|EFQ36928.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383 >gi|148547500|ref|YP_001267602.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148511558|gb|ABQ78418.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida F1] Length = 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%) Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 G +MS SV ++A T + + W P++ S E IG LTE Sbjct: 85 GAMMSIHNSVGCGPLLAYGTADQ-QQQWLPRLASGE--------------VIGCFCLTEP 129 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259 + G++ + ++ + + DG + ++G K F+S+ I+ A + +G FLVP Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312 +P G R ++K+G R++ T + F N +LG+ L ++ +E Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ R + A+ Y+R R G + + + +AD+ + + AA L Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K EA+ A++ A +MA V + A++ GG GY+E+ + R Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352 Query: 433 HYRESPANSILLGS 446 +YR++ I GS Sbjct: 353 YYRDARITQIYEGS 366 >gi|312131585|ref|YP_003998925.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella byssophila DSM 17132] gi|311908131|gb|ADQ18572.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella byssophila DSM 17132] Length = 595 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 68/352 (19%) Query: 146 LEAGHLMSPSVTSASMVALMTTPRVH-------KDWAPKIFSREYDPTNKAPMQKTSVAI 198 L AGH S SV ++ + T P V+ + PK+ S E+ Sbjct: 100 LGAGH--SFSVAQSAHTGIGTLPIVYYGNEEQKAKYLPKLASGEWKAA------------ 145 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEG--RVG 254 LTE G+D + ++ + DG Y ++G K W + +D FI+ A++E + Sbjct: 146 -YCLTEPDSGSDANSGKTKAELTEDGKFYKINGQKMWITNGGFADIFIVFAKIEDDKNLT 204 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F+V + S G+ ++K+G + + T ++ F N PVE+M Sbjct: 205 AFIVEK-----SFGGITMNEPEHKMGIKGSDTRQIFF-----------NDCMVPVENMLS 248 Query: 313 ------KILI------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 KI + + A+ +V G + + AI+YA R G + +K +A Sbjct: 249 KRENGFKIAVNILNVGRIKLAVAAVGGSKGVINHAINYANERKQFGISIGRFGAIKHKLA 308 Query: 361 DIALDIAAATALSFRLANSFDE------AKSRSEEAAYAR------IMAPITKYWCCKMA 408 ++A+ I +R + D+ A S+ A + I I K + Sbjct: 309 EMAIRIWTTETACYRAGQNIDDLIDSLTASGMSDADAKLKALEQYAIECAILKVNGSETL 368 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 V E ++ GG GY + + R YR+S N I G+ + VL++L K Sbjct: 369 DYVADEGVQVYGGMGYSADAPMDRAYRDSRINRIFEGTNEINRMLVLDMLLK 420 >gi|309779196|ref|ZP_07673959.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] gi|308922000|gb|EFP67634.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] Length = 391 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 24/246 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 L+E G+D+AA+ ++ DG Y L G K W + ++D +I+ A+ G Sbjct: 130 FALSEPEAGSDVAAMACAARE--DGTDYVLDGEKTWISNGGIADFYIVFARSGEAPGSRG 187 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 + ++E G+P +R+ N I + L F+N + V E K+ + Sbjct: 188 ISAFIVEAGTPGFEIAERI-NVIA--PHPLARLRFTNCR--IPASQRVGAAG-EGFKVAM 241 Query: 317 -YLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD SV+ R +L EA+ A R + G+L D + + +A +A I +A Sbjct: 242 RTLDVFRTSVAAAALGFARRALDEALARATTRKMFSGVLADFQLTQAKLAQMATAIDSAA 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++R A D+ ++ + EAA A++ A + A VI A++ GG G + E+ + Sbjct: 302 LLTYRAAWQRDQGRNVTREAAMAKLTA-------TENAQQVIDAAVQMWGGLGVVSEQPV 354 Query: 431 ARHYRE 436 R YRE Sbjct: 355 ERLYRE 360 >gi|254487654|ref|ZP_05100859.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214044523|gb|EEB85161.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 43/284 (15%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + +K +D Y LSG+K W + Sbjct: 106 NGTPEQKAKFLPGLCSGAHVGALAMSEPSAGSDVVSMKLRAEKRND-HYRLSGNKYWITN 164 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 P +D ++ A+ + G + L + S G +K+G R + T EL F + Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKSMKGFTTSPHFDKLGMRGSNTAELIFEDVEV 224 Query: 295 -FGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGG 347 F +LG+ +++L+ LD + ++G M L E + Y R G Sbjct: 225 PFENVLGEEG------RGVRVLMSGLDYERVVLAGIGLGIMAACLDEIMPYMAERKQFGQ 278 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCC- 405 + +M+ +AD+ + +A A + +A + D + +R++ AA CC Sbjct: 279 PIGSFQLMQGKMADMYTAMNSARAYVYEVAKACDRGEVTRADAAA------------CCL 326 Query: 406 ---KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A +A++ +GG+GY+ + + R +R++ I G+ Sbjct: 327 YASEEAMKQAHQAVQAMGGAGYLSDNPVGRIFRDAKLMEIGAGT 370 >gi|167584606|ref|ZP_02376994.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 377 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG--C 255 LTE + G++ + ++ + + DG + L+G K F+++ ++ V G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAVTDPDAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLVP G + + K+G R++ T + F N + + N+ E +KI Sbjct: 184 FLVPT-----DTPGFVVGKPEKKMGIRASDTCPITFENC---AIPEENLLGARGEGLKIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAA 369 L L+ + ++ + +A A RR+ + +P+ +++ +AD+A I AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMATQINAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 296 RLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADYE 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|254443828|ref|ZP_05057304.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258136|gb|EDY82444.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 393 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/259 (20%), Positives = 118/259 (45%), Gaps = 26/259 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 G+TE++ G+D A+ + + +DG Y ++G K ++ +P++D ++ A+ + G + + Sbjct: 138 GITEEQSGSDAMAMQTLATRRNDG-YLVNGEKCYIGFAPIADLILLFAKTDPNAGSWGIS 196 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGPVEDM 312 L D + G+ + K+G R+ + F + LLG L++ +E Sbjct: 197 AFLVDANTPGIHKSDNREKMGLRTLPMGNIAFRDCLIPHSALLGSEGLGLSLFNESMEWE 256 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + I V M L I +A++R G + + + IAD+ + + L Sbjct: 257 RSFIL----ATQVGAMARQLDSCIAFAKKRSQFGKSISEFQSISNRIADMRVRLETCRLL 312 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI---GGSGYIEERS 429 ++ A+ D+ +S + E+A ++ ++ + +A +M+ + G GY+ E Sbjct: 313 LYKTASLKDQGESITLESAMTKLT----------LSESFVASSMDAVRIHGAQGYLSEFE 362 Query: 430 IARHYRESPANSILLGSGN 448 + R+ R++ I G+ + Sbjct: 363 VERNLRDATGGLIYAGTSD 381 >gi|188995036|ref|YP_001929288.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas gingivalis ATCC 33277] gi|188594716|dbj|BAG33691.1| acyl-CoA dehydrogenase short-chain specific [Porphyromonas gingivalis ATCC 33277] Length = 379 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVGC 255 GLTE GTD AA + ++ D + L+G+K F+++ + F M + +G G Sbjct: 123 FGLTEPNAGTDAAAQQTFAEEKEDH-FVLNGNKIFITNAEYAHVYVVFAMTDKSQGTRG- 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308 + ++E G+P G + + K+G R +AT EL F N G + G ++ Sbjct: 181 -ITAFIVEKGTP-GFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKT 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ +I I A ++ + ++ E + Y + R G + + +AD+ I A Sbjct: 239 LDGGRIGI----ASQALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQA 294 Query: 369 ATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L RLA+ + K + E+A A++ +C + A + +A++ GG GY E Sbjct: 295 SRLL-VRLASWKKDMKMPYTMESAQAKL-------YCAETAMDMTTKAVQFHGGYGYTRE 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459 + R R++ I G+ L + NLL+ Sbjct: 347 YPVERMMRDAKITEIYEGTSEVQRLVIASNLLK 379 >gi|154285672|ref|XP_001543631.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150407272|gb|EDN02813.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 434 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG Y L+G K W + P +D ++ A+ + G + Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGI 222 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F +LG LN +K+L Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFVPQENMLGALN------RGVKVL 276 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ ++A+ Sbjct: 277 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 336 Query: 370 TALSFRLANSFDEAKS-----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 A ++ A DEA + R+++ A A + A C +A++ Sbjct: 337 RAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAERATECA-------LDAIQL 389 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +GG+GYI E R R++ I G+G + + +L Sbjct: 390 MGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424 >gi|324504264|gb|ADY41841.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum] Length = 340 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 31/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253 +TE G+D+AAI ++ +K D Y ++G K W + F +LA+ E GR Sbjct: 74 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKAPAGRA 132 Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V DG G+ + + +G R + T + F + ++ NV P Sbjct: 133 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 184 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + D+ V+ V LA EA YA R G + + +AD+A+++ Sbjct: 185 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 244 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A +++R A D K RS A I K + A A A++ +GG+G+ Sbjct: 245 ELARLVTYRAAVDVDN-KERSS------YYASIAKCFAADTANITAANAVQILGGNGFNS 297 Query: 427 ERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 298 EYPVEKLMRDAKIYQIYEGT 317 >gi|295704447|ref|YP_003597522.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] gi|294802106|gb|ADF39172.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] Length = 592 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 44/306 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IAAITSQGQ 219 + T + + PK+ S EY IG LTE G+D +AA T Sbjct: 122 ITYFGTKEQKEKYLPKLASGEY--------------IGAYCLTEPEAGSDALAAQTKAVL 167 Query: 220 KISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKN 277 Y L+G K +++ + SD FI A+V+G F+V + E GL + Sbjct: 168 NPEKTHYVLNGTKQYITNAAFSDTFITYAKVDGEHFTAFIVEKGFE-----GLSLGPEEK 222 Query: 278 KIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRV 330 K+G + ++T + + + +LG V G + + +L L SA M + Sbjct: 223 KMGIKGSSTRPVVYEDCLVPVENVLG--QVGKGHLIALNVLNLGRFNLGSACMGAAKYAF 280 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 LA A Y + R + + K IA +A I A+ ++ +R A +EA E+ Sbjct: 281 ELALA--YTKERKQFKTAIAEFNASKEKIAKMAARIFASESIQYRTAGLLEEALGGLYES 338 Query: 391 AYARIMAP----------ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 +++A + K + + + E+++ GG+G+I+E I + YR+S N Sbjct: 339 GNHKLVAKQLAEFAMECSVCKVYGSETLDLIADESLQLHGGAGFIQEYKIEQVYRDSRIN 398 Query: 441 SILLGS 446 I G+ Sbjct: 399 RIFEGT 404 >gi|226315081|ref|YP_002774977.1| acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis NBRC 100599] gi|226098031|dbj|BAH46473.1| probable acyl-CoA dehydrogenase short-chain specific [Brevibacillus brevis NBRC 100599] Length = 380 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 34/274 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A + + + D Y L+G K F+++ ++ +I+ A + + + Sbjct: 125 LTEAGSGSDSAGMRTTAVRDGDH-YILNGTKIFITNAGEAEIYIVFAVTQPELNHKGITA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------M 312 + + +G + + K+G RS+ T+ + F D+ V PVE+ Sbjct: 184 FIVEKGMDGFTMGKKEKKLGIRSSPTLAVNFE--------DVRV---PVENRLGEEGQGF 232 Query: 313 KI-LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI ++ LD ++ + +A+ A +YA+ R G + ++ +AD+A I Sbjct: 233 KIAMMTLDGGRNGIAAQALGIAQGAYEHARNYAKERSQFGKPIASLQAIQFKLADMATKI 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L+++ A D+ + +A +++ A T A V EA++ GG GY Sbjct: 293 EASRLLTYQAAWLEDQGLPYGKASAMSKVFAGDT-------AMEVTTEAVQVFGGYGYTR 345 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 E + R R++ I G+ + + N L K Sbjct: 346 EYPVERFMRDAKITQIYEGTNEIQRVVISNFLLK 379 >gi|225554498|gb|EEH02795.1| isovaleryl-CoA dehydrogenase [Ajellomyces capsulatus G186AR] Length = 434 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + DG Y L+G K W + P +D ++ A+ + G + Sbjct: 164 LAMSEHSAGSDVVSMKTTAKAV-DGGYLLNGTKMWITNGPDADYIVVYAKTKPDQGSKGI 222 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + + G R +K+G R + T EL F + F +LG LN +K+L Sbjct: 223 TAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEDVFVPQENMLGALN------RGVKVL 276 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + L+ ++S M+ +L + Y R G + +++ +AD+ ++A+ Sbjct: 277 MEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGTPIAHNQLIQGKLADMYTKLSAS 336 Query: 370 TALSFRLANSFDEAKS-----------RSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 A ++ A DEA + R+++ A A + A C +A++ Sbjct: 337 RAYTYATARQIDEAAASSSSEASNSAIRTQDCAGAILYAAERATECA-------LDAIQL 389 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +GG+GYI E R R++ I G+G + + +L Sbjct: 390 MGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 424 >gi|313117069|ref|YP_004038193.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312295021|gb|ADQ69057.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 45/308 (14%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMTTP------RVHKD-WAPKIFSREYDPTNKAPMQKT 194 +M +LEAG S+ S AL+ P KD W PK+ S E Sbjct: 77 IMQELEAGDSGLRSMASVQG-ALVMYPIHAFGSEAQKDEWLPKLGSGE------------ 123 Query: 195 SVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---- 248 A+G GLTE G++ +A+ + ++ D Y L+G K W +SP+SD ++ A+ Sbjct: 124 --AVGCFGLTEPEHGSNPSAMETYAERDGDE-YVLNGSKTWITNSPISDVAVVWARDRSS 180 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS 305 + V FLV + +G+ ++ +K+ R++ T E+ N +L ++ Sbjct: 181 EDTPVRGFLV-----ETDRDGVTTNKIDDKLSLRASITGEIALQNVRIPTENVLPNVKGM 235 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 GP+ + Y A ++ + + EA YA R G + + ++ +A++A Sbjct: 236 KGPLSCLTQARY-GIAWGAIGAAKDAFREAQDYATDREQFGQPIGGFQLQQQNLAEMATQ 294 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A L+ RLA ++ R E + A K +MA A E +GG+G Sbjct: 295 ITLAELLAHRLAELKEQGNLRPEHVSMA-------KRNNVRMARNQTRVAREMLGGNGIT 347 Query: 426 EERSIARH 433 + S RH Sbjct: 348 TDYSPMRH 355 >gi|21220243|ref|NP_626022.1| acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|256788642|ref|ZP_05527073.1| acyl CoA dehydrogenase [Streptomyces lividans TK24] gi|289772537|ref|ZP_06531915.1| acyl CoA dehydrogenase [Streptomyces lividans TK24] gi|10799845|emb|CAC12923.1| putative acyl CoA dehydrogenase [Streptomyces coelicolor A3(2)] gi|289702736|gb|EFD70165.1| acyl CoA dehydrogenase [Streptomyces lividans TK24] Length = 397 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 16/259 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P IG GLTE G+D A + + ++ + G + L+G K W + Sbjct: 119 FGSEGQRQEWLPRMAGGEVIGCFGLTEPDHGSDPANMRTNAKRDTGGDWVLNGRKMWITN 178 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 ++ ++ AQ E + F+VP SP G +K+K R++ T EL + Sbjct: 179 GSVAGVAVVWAQTEEGIRGFVVP----TDSP-GFSAPEIKHKWSLRASVTSELVLDDVRL 233 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 L +TG + L + I+ S+ R S A+ YA+ R G + + Sbjct: 234 PADAVLPEATGLRGPLSCLSHARYGIVWGSMGAARSSFEAAVEYAKSREQFGRAIGGFQL 293 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A+++ L+ L D + R E+ ++ ++ C+ A + Sbjct: 294 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIDICRTARTI--- 350 Query: 415 AMECIGGSGYIEERSIARH 433 +G +G E + RH Sbjct: 351 ----LGANGISLEYPVMRH 365 >gi|254239110|ref|ZP_04932433.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719] gi|126171041|gb|EAZ56552.1| hypothetical protein PACG_05292 [Pseudomonas aeruginosa C3719] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGD-EYVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383 >gi|326403394|ref|YP_004283475.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|325050255|dbj|BAJ80593.1| acyl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 391 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ ++ + D Y L G K F+S + +D ++++A+ G + F Sbjct: 134 LTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATDLYLVMARSGGAGPRGISSF 192 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPV 309 LVP+ GL + + K+G + T ++ F + F LG ++ + Sbjct: 193 LVPK-----DAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFRLGAEGEGFRIAMSGL 247 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I S+ G + +L +A Y R G L D ++ +AD+A ++ AA Sbjct: 248 DGGRVNI----GACSLGGAQAALEKAQRYMGEREAFGRRLEDFQALQFRLADMATELEAA 303 Query: 370 TALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A S D ++ + A A+ +A T + V A++ GG GY+ E Sbjct: 304 RLFLWSAAASLDRGEADTTRRCAMAKRIATDTGF-------EVANNALQLFGGYGYLAEY 356 Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 357 GIEKIVRDLRVHQILEGTNEIMRLIV 382 >gi|271970138|ref|YP_003344334.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] gi|270513313|gb|ACZ91591.1| acyl-CoA dehydrogenase [Streptosporangium roseum DSM 43021] Length = 607 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 47/297 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDA-----FIMLAQVEGR-VGC 255 LTE G+D+ A ++ + DG + + G K F++S D ++LA+ EG VG Sbjct: 164 LTEPDAGSDVGAGRAKAVRQDDGTWHIEGVKRFITSAEHDMADNIFHLVLARPEGHGVGT 223 Query: 256 -----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 FLV + D G NG+ ++ K+G + + T EL F G L+G+ Sbjct: 224 KGLSMFLVSKYHVDLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGEKHPAVGTLIGE 283 Query: 302 LNVSTGPVEDMKILI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI---DQPVM 355 ++ ++ M ++I + +++ + A+ YAR R V G L D+ Sbjct: 284 VHEG---IKQMFMIIEHARMMVGTKAIATLSTGYLNALEYARTR-VQGADLTQMADKSAP 339 Query: 356 KRAIA---DI--ALDIAAATALSFR----LANSFDEA------KSRSEEAAYA--RIMAP 398 + IA D+ L + + A R L ++ +A + R +E A A ++ P Sbjct: 340 RVTIAHHPDVRRELMLQKSYAEGMRALVLLTATYQDAVQIAAFEGRRDEHAEAMNDLLLP 399 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + + ++A +++ +GGSGY+++ I ++ R++ +S+ G+ LD+ Sbjct: 400 LVKGVGSERSYELLARSLQTLGGSGYLQDYPIEQYIRDAKIDSLYEGTTAIQGLDLF 456 >gi|34540812|ref|NP_905291.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas gingivalis W83] gi|34397126|gb|AAQ66190.1| acyl-CoA dehydrogenase, short-chain specific [Porphyromonas gingivalis W83] Length = 379 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 29/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVGC 255 GLTE GTD AA + ++ D + L+G+K F+++ + F M + +G G Sbjct: 123 FGLTEPNAGTDAAAQQTFAEEKEDH-FVLNGNKIFITNAEYAHVYVVFAMTDKSQGTRG- 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGP 308 + ++E G+P G + + K+G R +AT EL F N G + G ++ Sbjct: 181 -ITAFIVEKGTP-GFSIGKKELKMGIRGSATCELIFENCIVPKENLLGRVGGGFKIAMKT 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ +I I A ++ + ++ E + Y + R G + + +AD+ I A Sbjct: 239 LDGGRIGI----ASQALGIAQGAMDETVKYTKERKQFGRSIAQFQNTQFQLADLQCRIQA 294 Query: 369 ATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L RLA+ + K + E+A A++ +C + A + +A++ GG GY E Sbjct: 295 SRLL-VRLASWKKDMKMPYTMESAQAKL-------YCAETAMDMTTKAVQFHGGYGYTRE 346 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL-NLLE 459 + R R++ I G+ L + NLL+ Sbjct: 347 YPVERMMRDAKITEIYEGTSEVQRLVIASNLLK 379 >gi|289641203|ref|ZP_06473370.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] gi|289508965|gb|EFD29897.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] Length = 614 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGR---- 252 LTE G+D+ A ++ DG + + G K F+++ P + + LA+ G Sbjct: 164 LTEPDAGSDVGAGRTRAVPQPDGSWHIEGVKRFITNGDWDVPENIFHLTLARPVGHGPGT 223 Query: 253 --VGCFLVPRLLED---GSP---NGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + FLVP+ L D G P NG+ ++ K+G + +AT EL + G+L+GD Sbjct: 224 KGLSMFLVPKFLVDPNTGEPRERNGVHVSNVEKKMGLKVSATCELRYGEKQPAVGWLVGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL---------- 349 V G + +++ Y + +++ + A+ +AR R V G L Sbjct: 284 --VHDGIAQMFEVIEYARMMVGTKAIATLSTGYLNALEFARTR-VQGADLTRLLDKTAPR 340 Query: 350 ---IDQPVMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYAR-IMAPI 399 I P ++R + AL A D A +R E A ++ PI Sbjct: 341 VTVIHHPDVRRMLMVQKAYAEGMRALVLYTATIQDRVALAQAAGTRDELAERLNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + ++A +++ +GGSGY+++ I ++ R++ +++ G+ Sbjct: 401 VKGVGSERSYELLATSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGT 447 >gi|152984346|ref|YP_001350116.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150959504|gb|ABR81529.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 25/274 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D A + ++ ++ D Y L G K F+S S +++ G G CF Sbjct: 124 LTEPDAGSDAARLRTRARREGDE-YVLDGSKCFISGAGSTQVLIVMARTGEDGARGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LVP G+ Y R ++K+G R+ T + F G +G G V MK Sbjct: 183 LVP-----ADAPGIRYGRNEDKMGWRAQPTRTITFDGVRIPAGNRIG--PEGQGFVYAMK 235 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L+ A S+ + +L +++ Y R G L ++ +AD+ ++ A+ Sbjct: 236 GLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQ 295 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A+ D A A + + K + V EA++ GG GY+ + + Sbjct: 296 MVRLGAHRLDRGD------AEATLYCAMAKRFATDRCFYVCNEALQLHGGYGYLNDYPLE 349 Query: 432 RHYRESPANSILLGSGNAM-VLDVLNLLEKGTNL 464 R R++ + IL G+ M V+ LLE+G L Sbjct: 350 RWVRDTRVHQILEGTNEIMRVIVARRLLEQGGML 383 >gi|317497765|ref|ZP_07956078.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894954|gb|EFV17123.1| acyl-CoA dehydrogenase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 380 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 36/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEGRV 253 LTE G+D A + I +G Y L+G K F+++ P++D ++++A + +G + Sbjct: 125 LTEPDAGSDAAGCKTTA--IWNGKEYILNGLKCFITNGPLADYYMVVALTNPELKTKG-L 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R E G+ ++++K G R E+ F N +LG+ G Sbjct: 182 TAFIVEREWE-----GVSIGKIEDKCGIRCAQVSEVIFDNVRVPKENMLGE--EGKGFAV 234 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK L D + V+ + +A+ A +Y + R G L + +A++ + Sbjct: 235 AMKDL---DGGRIGVAAQGLGIAKGAYDIAFNYLKEREQFGKPLYKNQYLAFKMAELETE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + ++ A E KS S AA A+++ C A V EA++ +GG+GY+ Sbjct: 292 IEMAQYMLYKAATDKQEGKSYSVPAAKAKMV-------CTDAAMHVATEAVQMLGGNGYM 344 Query: 426 EERSIARHYRESPANSILLGS 446 +E + R R++ I G+ Sbjct: 345 KEYHVERMLRDAKITQIYEGT 365 >gi|313498568|gb|ADR59934.1| AcdA [Pseudomonas putida BIRD-1] Length = 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%) Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 G +MS SV ++A T + + W P++ S E IG LTE Sbjct: 85 GAMMSIHNSVGCGPLLAYGTAEQ-QQQWLPRLASGE--------------VIGCFCLTEP 129 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259 + G++ + ++ + + DG + ++G K F+S+ I+ A + +G FLVP Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLSAFLVP 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312 +P G R ++K+G R++ T + F N +LG+ L ++ +E Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGG 243 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ R + A+ Y+R R G + + + +AD+ + + AA L Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K EA+ A++ A +MA V + A++ GG GY+E+ + R Sbjct: 300 ILHAARLRSAGKPCLSEASQAKLFAS-------EMAERVCSMAIQVHGGYGYLEDYPVER 352 Query: 433 HYRESPANSILLGS 446 +YR++ I GS Sbjct: 353 YYRDARITQIYEGS 366 >gi|260434191|ref|ZP_05788162.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260418019|gb|EEX11278.1| isovaleryl-CoA dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 387 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + NG +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEMNGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGKGVAVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMA-----ACLDEIMPYLAERKQFGKPIGTFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYIYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350 Query: 427 ERSIARHYRESPANSILLGS 446 + ++R +R++ I G+ Sbjct: 351 DAPVSRLFRDAKLMEIGAGT 370 >gi|256396544|ref|YP_003118108.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362770|gb|ACU76267.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 417 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 20/275 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML---AQVEGRVGC- 255 +TE G+D ++ + + + G + L+G KWF++ F+++ A VEG G Sbjct: 122 FAVTEPEAGSDPSSGVTVATRTAGG-WLLNGEKWFVTCGDIADFLLVQADAIVEGAQGPE 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDL----NVSTGP 308 L D + GL R+ + + + N E ++ F +LGD+ ++ Sbjct: 181 KLATLFFVDKNAPGLEMTRVPHFMHHAVNGHPEFTLTDVFVADEDVLGDVGEGYELTKEW 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 D +++I A +V +L+EA +A RR G + + +++ +AD A+DIA Sbjct: 241 FTDERLMI----AARTVGAAERALSEARDWAVRRQAFGQPIAEFQLIQGMLADCAVDIAV 296 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + ++A D+ + + +A+ A K + A V ++ GG GY Sbjct: 297 NRAYTHQVAWEADQPDT-DRKTLHAK--ASTAKLAASEAAGRVADRCVQIFGGRGYDSAF 353 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN-LLEKGT 462 ++ R +RE + I G+ + + N L+++GT Sbjct: 354 AVERIFRELRVDRIWEGTSEIQRVIIANELIKRGT 388 >gi|297198269|ref|ZP_06915666.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197715522|gb|EDY59556.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D A++ ++ + D + ++G K W ++D + ++A+ EG G F Sbjct: 133 LSEPSSGSDAASLRTRAARDGD-EWVITGTKAWITHGGVADFYTVMARTGEEGPRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP +G+ + K+G + + T ++ F + D+ + I L Sbjct: 192 LVP-----ADADGVSAAAPEKKMGMKGSPTAQVHFDAV---RVPDVRRIGDEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVGYATGRLQFGRPIADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D + +++AA A K C A V +A++ +GG GY + Sbjct: 304 ALYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMKVTTDAVQVLGGYGYTADFPA 356 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 357 ERYMREAKVLQIVEGT 372 >gi|146282285|ref|YP_001172438.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145570490|gb|ABP79596.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 31/264 (11%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251 AIG LTE + G++ + ++ + + DG + L+G K F S+ ++ V G Sbjct: 120 AIGCFALTEPQAGSEAHNLRTRAELV-DGQWVLNGSKQFCSNAKRAKLAIVFAVTDPDLG 178 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302 + G FLVP G +R ++K+G R++ T + S N G L Sbjct: 179 KKGLSAFLVPT-----DTAGFAVERSEHKMGIRASDTCAVSLSDCRIPQANLLGERGKGL 233 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ +E +I I ++ R + A+ YAR R G + + + +AD+ Sbjct: 234 AIALSNLEGGRIGI----GAQALGIARAAFEAALLYARERVQFGKPIAEHQSIANMLADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L A EA+ A++ A +MA V ++A++ GG Sbjct: 290 QTQLNAARLLILHAARLKSAGLPCLSEASQAKLFAS-------EMAEKVCSQAVQIHGGY 342 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY+E+ + R+YR++ I GS Sbjct: 343 GYLEDYPVERYYRDARITQIYEGS 366 >gi|111018929|ref|YP_701901.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110818459|gb|ABG93743.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 382 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 16/243 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+ + + I DG Y ++G K F++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGSKTFITSAVRADFVVTAVRTGGPGASGV 181 Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L +E G+P G R +K+G R++ T EL F + L+G+ N + + Sbjct: 182 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPAANLVGEENSGFAQIAQAFL 240 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + A + S + L + + R R G LI + ++ + ++A A + Sbjct: 241 TERIALAAQAYSSAQRCLDLTLQWVRDRETFGRPLISRQSVQNTVTEMARKTDVARVYTR 300 Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L S + E +A+ A W +A++ GG GY+ E + R Sbjct: 301 ALVERSLVSNEDFIAEVCFAKNTAVEAGEWVAN-------QAVQLFGGLGYMRESEVERQ 353 Query: 434 YRE 436 YR+ Sbjct: 354 YRD 356 >gi|55981113|ref|YP_144410.1| acetyl-coenzyme A dehydrogenase, medium chain [Thermus thermophilus HB8] gi|55772526|dbj|BAD70967.1| acetyl-Coenzyme A dehydrogenase, medium chain [Thermus thermophilus HB8] Length = 410 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ + L+E G+D AA+ ++ + D Y L+G K W + ++ ++ A Sbjct: 143 PLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFAT 201 Query: 249 VEGRVG-CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------- 294 V + +V ++E G+P G ++ K+G R++ T EL F + Sbjct: 202 VNPELRHKGVVALVVERGTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGE 260 Query: 295 -FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 F + LN + PV A SV R +L EA YA+ R G + + Sbjct: 261 GFKIAMQTLNKTRIPV-----------AAGSVGVARRALDEARKYAKERQAFGQPIANFQ 309 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+ + I A ++ A D+ + +A I K + ++A Sbjct: 310 AIQFKLADMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAKAYASEIAFEAAN 362 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 +A++ GG GY+ E + + R+ N I G+ Sbjct: 363 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGT 395 >gi|262376318|ref|ZP_06069548.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] gi|262308919|gb|EEY90052.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter lwoffii SH145] Length = 390 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 125/291 (42%), Gaps = 36/291 (12%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S EY +G L ++E G+D+ ++ + + D Sbjct: 108 TEEQKQRYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLKAEDKGD-H 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + +D ++ A+ + + G + L + + G + +K+G R + Sbjct: 153 YLLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLVEKNMPGFSHGTHLDKLGMRGS 212 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHY 338 T L F N + NV G K+L+ + A++S M + I Y Sbjct: 213 NTYPLFFDNV---EVPKENVMGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACMDTVIPY 269 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRS--EEAAYARI 395 R G L + +M+ IAD+ A AL + + D+A+ SRS ++AA A + Sbjct: 270 IHDRKQFGQALGEFQLMQGKIADMYSTWLACKALVYAVGAECDKAEHSRSLRKDAASAIL 329 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A W + E ++ +GG+GYI E + R +R++ I G+ Sbjct: 330 YAAEKATW-------MAGETIQTLGGNGYINEFAAGRLWRDAKLYEIGAGT 373 >gi|257057322|ref|YP_003135154.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256587194|gb|ACU98327.1| acyl-CoA dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 386 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 29/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG----CF 256 L+E G+D AA++++ ++ D Y ++G K W +D + + + G C Sbjct: 131 LSEPHAGSDAAALSTRARRDGDA-YVVNGVKAWTTHGGQADYYTTMVRTSDDGGKGISCL 189 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPV 309 LV D G+ + K+G + T ++ F + G L ++ + Sbjct: 190 LV-----DADTPGMSAAPPERKMGLTGSTTAQMIFEDARVDADRLIGAEGEGLRIALSSL 244 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ I A SV + +L EA+ YA++R G +ID ++ +AD+A + +A Sbjct: 245 ASGRLGI----AACSVGLAQAALDEAVAYAKQRTQFGKPIIDFQGLEFLLADMAAAVESA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A A D ++++ A+++A A V +A++ GG+GY + Sbjct: 301 RATYLDAARRRDRGLPFQKQSSIAKLVA-------TDAAMKVTTDAVQVFGGAGYTRDFP 353 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + R+ RE+ I G+ L + L K Sbjct: 354 VERYMREAKVPQIFEGTNQIQRLVIARELRK 384 >gi|242808836|ref|XP_002485246.1| electron transport oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] gi|218715871|gb|EED15293.1| electron transport oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 138/334 (41%), Gaps = 57/334 (17%) Query: 202 LTEKRGGTDIAAITS-----------QGQKISD---GIYCLSGHKWFLSSPMSDAFIMLA 247 +TE+ GG+D++ + +G+ S G++ + G KWF S S ++LA Sbjct: 1 MTERTGGSDVSGTETVAYLSPENERQEGKDASGFELGLWEIDGFKWFSSGTESMMTMLLA 60 Query: 248 QVEGRVGCFLVP--RLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 + + F P R D N + QRLKNK+G R+N T ELE +L Sbjct: 61 RTTKGISLFYAPMRRKTMDQFGNTTTQLNCIRIQRLKNKLGTRANTTAELELKGMRAWL- 119 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----RRHVSGGILIDQPVM 355 +E+ I + ++SV+ + +++ ++AR R S +L + V Sbjct: 120 ---------IEEEGNGIKQVTQVLSVTRLHIAINCLGNWARGLAASRAYSKSVLAKEHVK 170 Query: 356 KRAIADIALDIA-----AATALSFRLANS---FDEAKSRSEEA-AYARIMAPITKYWCCK 406 R I + L+ A A+ L S F+ R E+ R++ K + Sbjct: 171 YRGIW-MLLNFASPFLGASENLPSEKETSKEPFELLPERPEDVLLLLRVLTSPIKGVSAR 229 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG---------NAMVLDVLNL 457 + + E +E +GG GY+E RE +LLGS + ++ D + Sbjct: 230 ASIHGLLECIEFLGGVGYLENERWISTLRECTV--MLLGSAVMDCLNRWIHRILQDTFDA 287 Query: 458 LEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSI 491 L+ E +S+L+Q + S K + + + I Sbjct: 288 LQSVIENLETQWSSLQQTIKESDKVTLMVNANEI 321 >gi|126735618|ref|ZP_01751363.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] gi|126714805|gb|EBA11671.1| acyl-CoA dehydrogenase-like protein [Roseobacter sp. CCS2] Length = 378 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 12/255 (4%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + + G Y L+G K F+S SDA+I++A+ + Sbjct: 124 LTEPGSGSDAAALKTKAIRDNAG-YQLTGTKAFISGGGYSDAYIVMARTSDDGPKGISAI 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY 317 ++EDG+ +GL + L++K+G RS T +++ N LLG+ + Sbjct: 183 IVEDGA-DGLSFGGLEDKMGWRSQPTRQVQMDNCPAPADNLLGEEGMGFKYAMAGLDGGR 241 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 L+ A S+ + +L + + Y R G + ++ +AD+ + + +A + A Sbjct: 242 LNIAACSIGAAQSALDQTVAYMAERKAFGKPIDQFQGLQFRLADMEIALQSARTFLRQAA 301 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D+ A A + K C + V + ++ GG GY+ + I + R+ Sbjct: 302 WKLDQG------APDATKFCAMAKKLCTETGSDVADQCLQLHGGYGYLADYGIEKIVRDL 355 Query: 438 PANSILLGSGNAMVL 452 + IL G+ M L Sbjct: 356 RVHQILEGTNEIMRL 370 >gi|23014213|ref|ZP_00054042.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 554 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 27/266 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP---MSDAFIM----------LAQ 248 LTE + G+D+ + + +DG + +SG K F+S ++ IM A Sbjct: 158 LTEAQAGSDLGLVRTMASPQADGSWSISGGKIFISGGDQNLTGGKIMHLVLARTPDAPAG 217 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 V+G + FL P L+DG+ N + RL+ K+G ++ T ++ F ++G Sbjct: 218 VKG-LSLFLCPSHLDDGTRNAIQVVRLEEKMGMHASPTCQVAFDGAKAEIIGAPGEGLAR 276 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV------SGGILIDQ--PVMKRAIA 360 + M LD A+ V V+L ++ YA R +G I + V + + Sbjct: 277 MFTMMNAERLDVAVQGVGLAEVALQRSLAYANERKQGRAGKDAGPDFIAKHGDVRRMLLT 336 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +AL + A+ R + E+ A +M P+ K + + A A++ G Sbjct: 337 QMALAM-GCRAMVMRTLVDLE----LGEKPALMELMTPVCKAFATEAAMEAADHAIQVHG 391 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G G++ E + + R+ I G+ Sbjct: 392 GYGFLREYRVEQILRDGRITRIYEGT 417 >gi|145225190|ref|YP_001135868.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145217676|gb|ABP47080.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length = 392 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 27/249 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LG+TE G+D+A I + ++ D Y ++G K F++S + F+ A G G + Sbjct: 137 LGITEPDTGSDVAGIRTTARRDGDH-YVVNGAKLFITSGVRADFVTTAVRTGGPGPSGIS 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 L+ + G R K+G + T EL F++ ++ + + ++ Sbjct: 196 LLVVERGATGFLVSRALKKMGWLCSDTAELGFTDVRVPVVNLVGPEGSGFLQIMQQFQVE 255 Query: 320 SAIMSV---SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 A ++V + + L + + ++R G L + V++ I DIA Sbjct: 256 RAFIAVQCYATAQRCLDLTLDWVKKRETFGRPLSTRQVVRHKIVDIA------------- 302 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA--------MECIGGSGYIEER 428 + D A++ + AA RI+A T MA EA ++ GG GY+ E Sbjct: 303 -TAVDVARTYTR-AAVDRIVAGDTDVRMVSMAKNQAVEACALAVDTAVQLYGGMGYLRET 360 Query: 429 SIARHYRES 437 + RHYR+S Sbjct: 361 EVERHYRDS 369 >gi|149922016|ref|ZP_01910458.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1] gi|149817181|gb|EDM76661.1| Acyl-CoA dehydrogenase-like protein [Plesiocystis pacifica SIR-1] Length = 605 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 64/338 (18%) Query: 175 APKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234 A K+F+ E+ T M T G + + R A+ ++G+ G++ L G K F Sbjct: 154 AEKLFTGEWGGT----MCLTEAGAGSSVGDNR----TKAVPAEGEA---GVWLLEGEKIF 202 Query: 235 LSSPMSDAF-----IMLAQVEGR------VGCFLVPR-------LLEDGSPNGLCYQRLK 276 ++ SD ++LA+ G + FLVP+ L G NG +L+ Sbjct: 203 ITGGDSDMVDNICHLVLARTPGSPEGTKGLSLFLVPKYWFSPDDLDALGDRNGAHVLKLE 262 Query: 277 NKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSG 327 +K+G +AT L + G+++G E M+++ L + ++ Sbjct: 263 HKMGINGSATCVLGLGSKMPCRGWMVGKER------EGMRLMFAMMNEARLGVGVQGLAA 316 Query: 328 MRVSLAEAIHYARRRHVSGGI------------LIDQPVMKRAIADIALDIAAATALSFR 375 S A HY R + +++ P ++R + + + A ++R Sbjct: 317 GSASFQYARHYVHERIQGTSLKNMRDGDAPRVKIVEHPDVRRMLMTQKVLVETMRAHAYR 376 Query: 376 LANSFDEAKSRSEE---AAYAR---IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 LA FD A +E A Y R ++ PI K C + V ++ GG G+ +E Sbjct: 377 LALQFDIADEHPDEDTRAKYLRRAELLLPICKSVCTDLGFDVAVTGVQIFGGYGFTQEFP 436 Query: 430 IARHYRESPANSILLGSGNAMVLDVLN--LLEKGTNLF 465 + + R++ SI G+ LD++ + +G LF Sbjct: 437 VEQLVRDAKIQSIYEGTNGIQALDLVGRKMRMEGGRLF 474 >gi|118778933|ref|XP_308965.3| AGAP006780-PA [Anopheles gambiae str. PEST] gi|116132618|gb|EAA04728.3| AGAP006780-PA [Anopheles gambiae str. PEST] Length = 429 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 23/257 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L ++E G+D+ ++ + K D Y L+G K W + P++D +++ A+ + Sbjct: 169 LAMSEAGSGSDVVSMKLRADKHGD-YYVLNGSKFWITNGPVADTYVIYAKTDTSAKPQHG 227 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+V R G +K+G R + T EL F + G +LG LN + Sbjct: 228 ITAFIVER-----GTAGFTQGPKLDKLGIRGSPTGELIFEDAKVPAGNILGGLNKGVYVL 282 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L A V M+ + A YA R + + +++ +AD+ + A Sbjct: 283 MSGLDLERLVLAAGPVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQGKMADMYTTMNAC 342 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D ++ ++ A + +C + A V +A++ +GG+GYI + Sbjct: 343 RAYLYSVARACDRGQANPKDCAGVIL-------YCAEKATQVALDAIQILGGNGYINDYP 395 Query: 430 IARHYRESPANSILLGS 446 R R+ I G+ Sbjct: 396 TGRIMRDCKLYEIGAGT 412 >gi|94314457|ref|YP_587666.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93358309|gb|ABF12397.1| putative acyl-CoA dehydrogenase [Cupriavidus metallidurans CH34] Length = 384 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 47/311 (15%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 + + +V + +A TP + ++ PKI S KA + L ++E G+D Sbjct: 92 ITTSAVYAGMHIAKFGTPEMQQELIPKIIS------GKAKL-------ALCMSEPGTGSD 138 Query: 211 IAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL-VPRLLEDGSPN 268 +A + + + D Y L+G+K W ++D F+++ + + G + LL D Sbjct: 139 VAGLKTYAEPAGDE-YILNGNKVWITCGHVADYFVVITRTDREGGRHQGISTLLVDAKAP 197 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 G+ + L+ +G R+ E+ F N + N+ G K IMS G+ Sbjct: 198 GVTVRPLQ-MLGRRTTHANEVFFDNV---RVPAKNLFGGEGRAWK-------NIMSCLGL 246 Query: 329 -RVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 R+ LA A YA+ R G + D V++ +AD+ + A + +R Sbjct: 247 ERLGLAAISAGHCFKITEYARDYAKERVQFGKPISDFQVIQHKLADMLILSETARQVVYR 306 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A+ D ++ EA+ A+++A + C + M+ + G+GY E + +R Sbjct: 307 AADVLDAGQAAVTEASIAKVVASENNFKCADI-------GMQIMAGAGYSMEYDMQMFFR 359 Query: 436 ESPANSILLGS 446 +S I G+ Sbjct: 360 DSRVGPIGGGT 370 >gi|300870661|ref|YP_003785532.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000] gi|300688360|gb|ADK31031.1| acyl-CoA dehydrogenase [Brachyspira pilosicoli 95/1000] Length = 367 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 40/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255 GLTE GTD A Q + D + ++G K F++ S +D +++ A + G Sbjct: 109 FGLTEPNAGTDAAG--QQTTAVLDEATQEWVINGSKIFITNSGYADVYVIFAMTDKSQGL 166 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + + + G + + K+G R +AT EL F N LLG+L + Sbjct: 167 KGISSFIVEKDTPGFTVGKKEKKLGIRGSATCELIFENARIPKENLLGELG------KGF 220 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 KI A+M++ G R+ +A E + Y + R G + + + +A Sbjct: 221 KI------AMMTLDGGRIGIASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLA 274 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ + + AA L ++ A S +AA A++ A T A V +A++ G Sbjct: 275 NLEVKVEAARLLVYKAAWRESNHLPYSVDAARAKLFASET-------AMEVTTKAVQLHG 327 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY E + R R++ I G+ Sbjct: 328 GYGYTREYPVERMMRDAKITEIYEGT 353 >gi|262281601|ref|ZP_06059379.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262256977|gb|EEY75717.1| acyl-CoA dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 385 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGAEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + S+ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANSIGGLETLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + S ++A + K ++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVS-------MLASMAKLKSGRLTREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|226356458|ref|YP_002786198.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226318448|gb|ACO46444.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 400 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252 GLTE G+D + S+ + DG + L+G K F++ + +++LA+ EG+ Sbjct: 135 GLTEPGSGSDSGGMQSRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDAAREGKGKN 194 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 + F+ R G R ++K+G RS+ T +L F + LLG+ + Sbjct: 195 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPADALLGERGNAFK 250 Query: 308 PVEDMKILIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 V MK+ LD + ++ M R + A Y R G + + +AD+ Sbjct: 251 DV--MKV---LDGGRVGIAAMGLGLGRAAFEYAAKYTMTREQFGKPIGHNQNLAFRLADM 305 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A+ D ++ + A A++ A C EA++ +GG Sbjct: 306 DTKLEAARLLIRKAADLKDAGQNFTVPVARAKLFATTVGVEACD-------EAIQMLGGY 358 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI+E + R +R++ I G+ Sbjct: 359 GYIKEYPVERFWRDNRLTRIGEGT 382 >gi|150020551|ref|YP_001305905.1| acyl-CoA dehydrogenase domain-containing protein [Thermosipho melanesiensis BI429] gi|149793072|gb|ABR30520.1| acyl-CoA dehydrogenase domain protein [Thermosipho melanesiensis BI429] Length = 380 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 18/274 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ K + LTE GTD AA K+ Y L+G K F+++ ++D +I+ A Sbjct: 113 PLVKGAKIGAFALTEPNAGTD-AANQQTTAKLQGENYILNGTKIFVTNGGVADIYIVFAT 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 +G + + + G +++ K+G R + T E+ N ++ N+ Sbjct: 172 TNRELGTKDISAFIVEKDFEGFKIGKVEEKMGIRGSMTTEIVLENC---MVPKENLLGAE 228 Query: 309 VEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 E KI L LD + V+ + +AE + Y + R L ++ IA++ Sbjct: 229 GEGFKIALKTLDGGRIGVAAQALGIAEGAIDEVLKYVKERKQFNRPLSSFQGLQWYIAEM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A D+ +S +A+ A K + A V +A++ GG Sbjct: 289 ITNTRAAKLLVYDAALKKDKGLLKSADASMA-------KKFASDNAMFVTTQAVQIFGGY 341 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 GY+++ I R R++ I G+ + + N Sbjct: 342 GYMKDYPIERMMRDAKITQIYEGTNEVQKMVIAN 375 >gi|116694310|ref|YP_728521.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113528809|emb|CAJ95156.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 389 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 33/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D+A I+ + + D + ++G+K++ + FI+ V R + P+ Sbjct: 123 LSEPNAGSDVANISCRAVRNGDE-WVITGNKYWCTFADEADFIL---VICRTDAVIDPKA 178 Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303 G P G + +K KIG T EL F ++GD Sbjct: 179 RHKGLSAFMVEKPRGALPEGVKGSVIPKIGYHGWTTWELAFDGCRVPHSKMVGDEGKAFY 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++T +E + +A S+ + +L ++I YAR R G + + ++ IAD+A Sbjct: 239 LATAGLEAARA----HTAARSIGLAQGALEDSIQYARDRAQFGSPIGNFQAIRFKIADMA 294 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA AL + + D+ EA+ ++ A +M V +E ++ GG+G Sbjct: 295 TQIEAARALLYSVCEKIDDGGRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y + R++R++ I G+ Sbjct: 348 YTTHFAAERYWRDARLTKIFEGT 370 >gi|86741126|ref|YP_481526.1| acyl-CoA dehydrogenase-like protein [Frankia sp. CcI3] gi|86567988|gb|ABD11797.1| acyl-CoA dehydrogenase-like [Frankia sp. CcI3] Length = 385 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 30/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + LTE GG+D+ A+T+ ++ + Y ++G K W ++ S +L + + + Sbjct: 121 MALTEPAGGSDLQALTTSARRAGEH-YVVNGSKTWITNARRSQLIALLCRTDPKA----E 175 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGP 308 PR L+E G +G R K+G + + EL F + LLG G Sbjct: 176 PRHKGISILLVEPG--DGFTVSRDLPKLGYKGVESCELSFDDYHVPVDALLGG-EEGRGF 232 Query: 309 VEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + MK L + A ++ R +L +A+ YA+ R G + + +AD+A Sbjct: 233 AQMMKGLEIGRIQVAARALGVARAALDDALRYAQEREAFGKPIWKHQSIGNYLADMATKY 292 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L A+ +D EA A++ A T A + A+ GG GY Sbjct: 293 TAARQLVLLAADRYDAGDRCDLEAGMAKLFASET-------AMEIALNAVRVHGGYGYST 345 Query: 427 ERSIARHYRESPANSILLGSGN 448 E + R++R++P +++G G Sbjct: 346 EFDVERYFRDAPL--MIIGEGT 365 >gi|309789696|ref|ZP_07684276.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] gi|308228182|gb|EFO81830.1| acyl-CoA dehydrogenase domain protein [Oscillochloris trichoides DG6] Length = 391 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------QVEGRVG 254 LTE G+D A + + + D + L+G K W + +D ++ A G + Sbjct: 125 LTEPNAGSDAAHLQTTAELHGDE-WVLNGQKMWITNGSFADVIVVHAVNDRHKGARGGIT 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVE 310 F+V E +P G ++++K+G +++ T L F + + G V G Sbjct: 184 AFIV----EKDTP-GFRVGKVEHKMGLKASHTASLFFEDCRVPAENVIGGAHGVGHGFPL 238 Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 MK L + SV G + + + YA RH G L D ++ +A++A+ I Sbjct: 239 AMKTLDIGRVGLGGSSVGGAKEAFELSRKYAVERHQFGRALADFQAIQFKLAEMAVKIYT 298 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + A D K + E++ I K +C +MA VI EA++ GG G+ E Sbjct: 299 MEQIVYDCARRVDAGKPATLESS-------IVKLYCTEMASQVIDEAIQIYGGMGFSREV 351 Query: 429 SIARHYRESPANSILLGS 446 + R YR++ I G+ Sbjct: 352 PLERMYRDARVTRIFEGT 369 >gi|149185275|ref|ZP_01863592.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21] gi|148831386|gb|EDL49820.1| acyl-CoA dehydrogenase family protein [Erythrobacter sp. SD-21] Length = 579 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 45/296 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG----IYCLSGHKWFLS---SPMSDAFI--MLAQV- 249 + LTE + G+D+ A+ + + I++G + + G K +++ +++ I +LA++ Sbjct: 161 MNLTEPQAGSDVGALRTTAKPITEGEHTGKFLIKGQKIYITWGEHELAENIIHLVLARLP 220 Query: 250 ---EGRVGC--FLVPR--LLEDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 EG G F VP+ + DGS N L L++K+G ++ T + + + G Sbjct: 221 DAPEGSRGISLFTVPKYHVKPDGSLGAHNDLRCVSLEHKLGINASPTCVMSYGDNDECIG 280 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGI--- 348 L+G N + M +++A ++V V + E A+ YA+ R S Sbjct: 281 ELVGTENRGLAAMFTM-----MNNARINVGNQGVQIGERATQQALDYAKERVQSARAGSP 335 Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR--IMAPIT 400 +I+ P ++R + + A A+ + A D +EAA AR ++ P+ Sbjct: 336 DKAAVSIIEHPDVRRMLLRMKALTEGARAVLYYTAGQVDRG-VLGDEAAKARGEVLTPLI 394 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 K W + V + ++ GG G +EE A+H+R+S I G+ D++ Sbjct: 395 KAWGTDIGIEVASLGIQVHGGMGLVEETGAAQHWRDSRIAPIYEGTNGIQAADLVT 450 >gi|260466647|ref|ZP_05812835.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259029653|gb|EEW30941.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 398 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 23/243 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ +K +DG Y L+G K W ++P++D F++ A+++G G + Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTADG-YKLTGSKMWISNAPIADVFVVWAKLKGDNGKDEI 196 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + GL ++ K+ R++ T E+ LL + GP Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 251 GCLNRARYGISWGAMGAAEDCWHRARQYGLDRKQFGKPLAGTQLFQKKLADMQTEIALGL 310 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ DE K E M I K C A + +A + GG+G + Sbjct: 311 QGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363 Query: 431 ARH 433 RH Sbjct: 364 MRH 366 >gi|227820315|ref|YP_002824286.1| acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234] gi|227339314|gb|ACP23533.1| probable acyl-CoA dehydrogenase [Sinorhizobium fredii NGR234] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 18/260 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D AA+ ++ + D Y L+G K F+S ++ G G + Sbjct: 126 LTEPGSGSDAAALKTKAVRDGDA-YLLTGQKQFISGAGESGLYIVMARTGEEGPKGISAF 184 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + D GL + + K+G + T V + +N G ++ ++ ++ Sbjct: 185 VVDKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVPAANRLGAEGEGFRIAMAGLDGGRL 244 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ G + + +A+ Y R G + + ++ +AD+A D+ A + Sbjct: 245 NI----AAASLGGAQAAFDKALAYVAERRAFGKAIGEFQALQFRLADMATDLEIARTFLW 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 R A++ D + + + + + K + AV +A++ GG GY+ + + + Sbjct: 301 RAASALDASDPDATK------LCAMAKRFVTDRCFAVANDALQLHGGYGYLADYGVEKIV 354 Query: 435 RESPANSILLGSGNAMVLDV 454 R+ + IL G+ M L V Sbjct: 355 RDLRVHQILEGTNEIMRLIV 374 >gi|221481999|gb|EEE20365.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii GT1] Length = 409 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 31/288 (10%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------- 247 A+G L ++E G+D+ + SQ + DG Y L G K W + ++D I+ A Sbjct: 128 AVGALAMSEPEAGSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEI 187 Query: 248 -QVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +V + G + ++E+G +GL + +K+G R + T L F + + N+ Sbjct: 188 QEVPAKAGSSRSVTAVIVENGM-DGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNI 243 Query: 305 STGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + KIL+ LDS + ++ M L + Y R G + + +M+ Sbjct: 244 LGTTGDGAKILMSGLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGK 303 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ A + +A S+ E + + A + + C + A V + ++ Sbjct: 304 LADVYSAFITHRAFLYSVARSYSEGSAGRADCASSILC-------CAEKATQVALDTIQM 356 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 +GG+GY E R R+S I G+G + + +L E T E Sbjct: 357 LGGNGYTNEYPAGRLLRDSKLYEI--GAGTSEIRRMLIARELNTRFRE 402 >gi|172037990|ref|YP_001804491.1| AMP-dependent synthetase and ligase, acyl-CoA synthase [Cyanothece sp. ATCC 51142] gi|171699444|gb|ACB52425.1| AMP-dependent synthetase and ligase, probable acyl-CoA synthase [Cyanothece sp. ATCC 51142] Length = 1275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 122/308 (39%), Gaps = 53/308 (17%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGR--- 252 LTE G++ AITS +S + L+G K W S+ + + F+ +G+ Sbjct: 716 FALTEPSAGSNPQAITSSAMPLSSDKWVLNGTKIWSGSAAWAGVINVFVQQKDAQGKFQG 775 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPV 309 + F V R G+P GL +G R + +N + LGD Sbjct: 776 ISSFAVRR----GTP-GLKQGPEALTLGMRGMVQNTVYLNNVPVSASQQLGDPGEGMKVA 830 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +D + L A SV GM+ Y+ RR +S G L+D P++ + + I Sbjct: 831 QDAMMYGRLAIAAASVGGMKRCAQLWHRYSSRRQISTGRLLDNPLVLARLNGLTAAITTV 890 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM-APAVIAEA----MECIGGSGY 424 L +A D+ + PI Y CKM AP +A ++ +GG GY Sbjct: 891 ETLVTSIAQLLDQGQE-----------VPIEAYTVCKMAAPEFYWQAADNLVQFLGGRGY 939 Query: 425 IEER---SIARHYR-----ESPANSI--LLGSG--------NAMVLDVLNLLEKGTNLFE 466 IE I R R E P ++ LGS ++ D L + E ++E Sbjct: 940 IETNIAPQILRDARVLRIFEGPTETLTAFLGSRLIYQPKGLKRLLRDTLGVPE----IYE 995 Query: 467 QLFSTLEQ 474 QL T+EQ Sbjct: 996 QLQQTVEQ 1003 >gi|158316346|ref|YP_001508854.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EAN1pec] gi|158111751|gb|ABW13948.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EAN1pec] Length = 384 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 20/261 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVGC-FL 257 GLTE G+D A+ + + SDG Y ++G K ++++ + F I+ A+V G Sbjct: 123 FGLTEPGAGSDAGALRTTARASSDG-YVVNGSKLYITNALGCDFGILFARVIDHDGTDHG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V LL D + + + + + RS + EL F +TF + NV + + + Sbjct: 182 VSALLVDAAESEFGVHDIPH-MPLRSTTSCELSFHDTF---VPAANVLGTLGGGLSLGMK 237 Query: 318 ------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A+ +V + L +I + R+R G + ++++ + +IA + Sbjct: 238 AVNAGRLNMAMGAVGLSQACLEASIAFCRQREQFGKPIAAFQLIQQMVVEIATLTETSRL 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A + D + E + A KY+C + A A++ GG+G +EE + Sbjct: 298 LGYNAARAIDAGEPGRYECSMA-------KYYCGESAGRAATLALQVHGGAGLMEESPVE 350 Query: 432 RHYRESPANSILLGSGNAMVL 452 R++R++ +I G+ +L Sbjct: 351 RYFRDAREATIPEGTSQIQIL 371 >gi|118617473|ref|YP_905805.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99] gi|183982286|ref|YP_001850577.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M] gi|118569583|gb|ABL04334.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium ulcerans Agy99] gi|183175612|gb|ACC40722.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium marinum M] Length = 609 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 47/296 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDA-----FIMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRAKAIEQPDGTWHIEGVKRFISGGDVGDTSENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP L D G NG+ L++K+G +S+ T E+ F T G+L+ Sbjct: 224 TKGLSLFYVPNYLFDPDTGELGPRNGVYVTGLEHKMGLKSSPTCEVTFGATDVPAVGYLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347 G V G + ++ + + + S + A+ YA+ R V G Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSSGTLSTGYLNALAYAKER-VQGADLTQMTDKTA 340 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397 ++ P ++R++ AL A D+A ++ A ++ Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 P+ K + A ++ E+++ +GGSG++ + I ++ R++ +S+ G+ LD Sbjct: 401 PVVKGVGSERAYEILTESLQTLGGSGFLSDYPIEQYIRDAKIDSLYEGTTAIQSLD 456 >gi|111023060|ref|YP_706032.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110822590|gb|ABG97874.1| fatty acid CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-RVGCF 256 GLTE G+D A T K G + ++G+K F+++ +D + + V G + G Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGTKDGKK 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312 + +L S G + NK+G ++ T L FS D+ V P E++ Sbjct: 187 EISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFS--------DVRV---PEENLLGER 235 Query: 313 -----KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 L LD ++++ + V A E++ YA+ R G +P+ I Sbjct: 236 GRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFG-----RPIGHNQA--I 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A IA A + ++ +A +R + A I K + A +A + GG Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAAIAKLVASEAAMDNARDATQIHGGY 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G++ E ++ARHYR+S + +G G V +L E G Sbjct: 349 GFMNEYTVARHYRDS--KILEIGEGTTEVQLMLIAREAG 385 >gi|159897777|ref|YP_001544024.1| acyl-CoA dehydrogenase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890816|gb|ABX03896.1| acyl-CoA dehydrogenase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 415 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 LTE GTD+A + S D Y L+G K W S ++D F+++A + + Sbjct: 140 LTEPNAGTDVAGMQSTAVLEGDH-YILNGEKTWISLSDLADHFLVVAYTDKSKKQRGMTA 198 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+V R E G+ + K+G R+ T + F N + L E KI Sbjct: 199 FIVERSFE-----GVSTMPIHGKLGVRAGNTGSVVFENVRVPVANRLGEEG---EGFKIA 250 Query: 315 LIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD+ +V+ ++ +L ++ YA+ R G + ++KR I+ + L + A Sbjct: 251 MTALDNGRYTVATGATGLIQAALEASVKYAKERETFGVPIGQHQLVKRMISHMVLKLETA 310 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R ++ + E A+ A + + C +A++ G G+ +E Sbjct: 311 RLLCYRAGWLKNQGIRNTRETTLAKWHATVESFNCAN-------DAIQIHGAYGFSDEYP 363 Query: 430 IARHYRESPANSILLGS 446 + R+ R S I G+ Sbjct: 364 VERYLRNSRGAVIYEGT 380 >gi|313886290|ref|ZP_07820016.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica PR426713P-I] gi|332299782|ref|YP_004441703.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707] gi|312924235|gb|EFR35018.1| butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica PR426713P-I] gi|332176845|gb|AEE12535.1| Butyryl-CoA dehydrogenase [Porphyromonas asaccharolytica DSM 20707] Length = 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236 F E + P + IG GLTE GTD +A + + + Y L+G+K F++ Sbjct: 101 FGTEEQKQHYLPKLASGEWIGAFGLTEPNAGTDASAQQTFAVE-EEECYILNGNKIFITN 159 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 + + +I+ A + G + + + G + + K+G R +AT EL N Sbjct: 160 AEYAHVYIIFAMTDKSKGNKGITAFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRI 219 Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 G + G V+ ++ +I I A ++ R ++ E + Y + R G + Sbjct: 220 PKDRLLGKVGGGFKVAMHTLDGGRIGI----AAQALGIARGAMDETVKYTKERKQFGRSI 275 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + +AD+ I A+ L R A D S + EAA A++ +C + A Sbjct: 276 AKFQNTQFQLADLKARIDCASLLVRRAAWCKDNGLSYNLEAAEAKL-------FCAETAM 328 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +A++ GG GY E + R R++ I G+ Sbjct: 329 DMTTKAVQFHGGYGYTREYPVERMMRDAKITEIYEGT 365 >gi|226953996|ref|ZP_03824460.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] gi|226835247|gb|EEH67630.1| acyl-CoA dehydrogenase [Acinetobacter sp. ATCC 27244] Length = 393 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 116 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 160 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 161 SKMWITNGGDADVLVVYAKTDPQAGAKGMTAFLIEKDMKGFSHGNHLDKLGMRGSNTYPL 220 Query: 290 EFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N +LG V G M L Y + A++S M + I Y +R Sbjct: 221 FFDNVEVPVENVLG--GVGNGAKVLMSGLDY-ERAVLSAGPLGIMDACMDVVIPYLHQRE 277 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 278 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 337 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 338 ATW-------MAGEAIQTLGGNGYINEFPTGRLWRDAKLYEIGAGT 376 >gi|226365563|ref|YP_002783346.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226244053|dbj|BAH54401.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEG-RVGCF 256 GLTE G+D A T K G + ++G+K F+++ +D + + V G + G Sbjct: 128 FGLTEPGAGSD-AGGTKTTAKFDSGEWIINGNKQFITNSGTDITKLVTVTAVTGTKDGKK 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312 + +L S G + NK+G ++ T L FS D+ V P E++ Sbjct: 187 EISTILVPTSTPGFTAEPAYNKVGWNASDTHPLTFS--------DVRV---PEENLLGER 235 Query: 313 -----KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADI 362 L LD ++++ + V A E++ YA+ R G +P+ I Sbjct: 236 GRGYANFLRILDEGRIAIAALSVGAAQGCVDESVKYAKEREAFG-----RPIGHNQA--I 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A IA A + ++ +A +R + A I K + A +A + GG Sbjct: 289 AFKIARMEARAHTARTAYYDAAARMLSGKPFKKQAAIAKLVASEAAMDNARDATQIHGGY 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 G++ E ++ARHYR+S + +G G V +L E G Sbjct: 349 GFMNEYTVARHYRDS--KILEIGEGTTEVQLMLIAREAG 385 >gi|94984919|ref|YP_604283.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] gi|94555200|gb|ABF45114.1| acyl-CoA dehydrogenase-like protein [Deinococcus geothermalis DSM 11300] Length = 393 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 34/264 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR- 252 GLTE G+D + ++ + DG + L+G K F++ + +++LA+ + G+ Sbjct: 128 GLTEPGSGSDSGGLQTRAVEQPDGSWILNGSKNFITQGSVGGTYVVLARTDPPRPGKGKN 187 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 + F+ R G R ++K+G RS+ T +L F + LLG+ + Sbjct: 188 DGISAFVFNR----DEVTGFSIGRKEDKLGLRSSDTAQLIFEDVHLPQDALLGERGNAFK 243 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADI 362 V M++L D + + M + L A YA R G + + +AD+ Sbjct: 244 DV--MRVL---DGGRIGIGAMGLGLGRAAFEFAARYALEREQFGKPIAMNQAIGFKLADM 298 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A+ D ++ + AA A++ A C +A++ +GG Sbjct: 299 DTQLEAARLLLRKAADLKDAGENFTVAAARAKLFATNVGVQACD-------DAIQILGGY 351 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI+E + R++R++ I G+ Sbjct: 352 GYIKEYPVERYWRDNRLTRIGEGT 375 >gi|254773971|ref|ZP_05215487.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 18/263 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ +A++A I A S Sbjct: 242 ERIGLATQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + ++ + +A+ A W V +A++ GG GY+ E + R Y Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354 Query: 435 RESPANSIL-LGSGNAMVLDVLN 456 R IL +G G +L L+ Sbjct: 355 R---GMRILGIGGGTTEILTALS 374 >gi|313760586|ref|NP_001186490.1| isovaleryl-CoA dehydrogenase, mitochondrial [Gallus gallus] Length = 422 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------G 251 L ++E G+D+ ++ + K D Y L+G+K W + P +D I+ A+ + Sbjct: 161 LAMSEPNAGSDVVSMKLKADKKGD-YYVLNGNKFWITNGPDADVLIVYAKTDLNAVPASQ 219 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + F+V E G P Q+L +K+G R + T EL F + +LG L+ Sbjct: 220 GITAFIV----EKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAENILGKLSKGV-- 272 Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ LD + +SG M+ L AI Y R G + +M+ +AD+ Sbjct: 273 ---YVLMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQRIGHFQLMQGKMADMY 329 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A + +A + D+ +++ A + + + A V + ++C+GG+G Sbjct: 330 TRLMACRQYVYNVAKACDQGHFNAKDCAGVIL-------FSAECATQVALDGIQCLGGNG 382 Query: 424 YIEERSIARHYRESPANSILLGSGNAMV 451 YI + + R R++ I G+G + V Sbjct: 383 YINDYPMGRFLRDAKLYEI--GAGTSEV 408 >gi|75677199|ref|YP_319620.1| Acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gi|74422069|gb|ABA06268.1| isovaleryl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 407 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ + D Y L+G K W + ++D ++ A+ + G + Sbjct: 148 LAMSEPGAGSDVISMRTRADRKGD-RYILNGSKMWITNGTIADTLVIYAKTDAAAGARGI 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + NG + +K+G R + T EL F + +LGD + M L Sbjct: 207 TAFILEKGMNGFSTAQKLDKLGMRGSDTCELVFEDCEIPEDNVLGDAGRGVNVL--MSGL 264 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ M+ + + Y R R G + +++ +AD+ + + A A Sbjct: 265 DY-ERAVLAAGPLGIMQACMDMVMPYVRERKQFGQPIGSFQLVQAKVADMYVTMNACRAY 323 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + E+AA A I+ K C + +A++ +GG+GYI + R Sbjct: 324 VYAVAKACDRGEITREDAAGA-ILYSAEKATQCAL------DAIQLLGGNGYINDYPAGR 376 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 377 LLRDAKLYEI--GAGTSEIRRML----IGRELFEK 405 >gi|317123441|ref|YP_004097553.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315587529|gb|ADU46826.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 620 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 58/305 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S SD +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAIQQPDGTWHIEGVKRFITSAESDLVDNIVHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ D G NG +++K+G + + T E+ F + G LLGD Sbjct: 224 KGLSLFIVPKFHVDLETGELGERNGAYVTNVEHKMGLKVSTTCEVTFGDKEPAVGTLLGD 283 Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID------ 351 ++ +E+ ++ + +++ + A+ YA++R V G L Sbjct: 284 VHDGIAQMFHVIENARMFV----GTKAIATLSTGYLNALEYAKQR-VQGADLTQMTDKTA 338 Query: 352 -------QPVMKRAIADIALDIAAATALSFRLANSFD--------------EAKSRSEEA 390 P ++R++ AL A D E S +E A Sbjct: 339 PRVTITHHPDVRRSLMLQKSYAEGLRALVLYTATQLDTVAQAQNGNRTVAVEKGSDAELA 398 Query: 391 A-YARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + + ++ PI K + A ++ E+++ +GGSG++++ I ++ R++ +++ G+ Sbjct: 399 SRVSDLLLPIVKGLGSERAWVLLGTESLQTLGGSGFLQDYPIEQYVRDAKIDTLYEGTTA 458 Query: 449 AMVLD 453 LD Sbjct: 459 IQGLD 463 >gi|306820875|ref|ZP_07454495.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550989|gb|EFM38960.1| acyl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 30/270 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D +A + K D Y L+G K F++ + ++D +++ A + G + Sbjct: 121 FALTEPGAGSDASAGKTTAVKDGDS-YVLNGRKCFITNAEVADVYLITAMTDKEAGVKGI 179 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-----EDM 312 L+E G+P GL ++K+G R+ SNT +L D + + E Sbjct: 180 SMFLVEKGTP-GLSTGNHEDKMGIRT--------SNTADVVLEDCRIPAANLVGKEGEGF 230 Query: 313 KI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD A ++ + +L EAI Y + R G +I M+ AD+ + I Sbjct: 231 KIAMKTLDQARTWMGCVATGIAQRALDEAIAYTKERKQFGKPIIKNQAMQFKFADMQIKI 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A + D + S E+A I K + +A V ++ ++ GG GY Sbjct: 291 ETARQMVAHSLTKMDMGLNFSMESA-------IAKCYASDIAMEVASDGIQAFGGYGYSR 343 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLN 456 E + + R++ I G+ + + V N Sbjct: 344 EYPVEKLLRDAKIFQIFEGTNEILRIVVSN 373 >gi|296165479|ref|ZP_06848012.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899170|gb|EFG78643.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 390 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 49/302 (16%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD 223 +T+ + W P+ S E IG L +TE G+D+ AI + ++ D Sbjct: 104 LTSEEQKQRWLPRFASGEL--------------IGALAMTEPGAGSDLRAIRTSARRDGD 149 Query: 224 GIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 + L+G K F+SS MSD ++ A + G + + G R +KIG Sbjct: 150 H-WVLNGQKTFISSGIMSDLIVVAACTDQEAGSRGFSLFVVERDTPGFRRGRQLDKIGLP 208 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA 333 + T EL F + + PVE++ ++ +L + V+ ++ Sbjct: 209 AQDTAELFFDD-----------ARVPVENLLGKEGSGLQYLMSHLPRERLGVTAQAIATT 257 Query: 334 EAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 AI Y R+R G L + ++ +A+++ ++ A A + +F+ + Sbjct: 258 RAIFDLTVEYCRQRKAFGQPLTAKQHIRFELAEMSTELDIAEAYVDKSVEAFNAGELSPV 317 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 +AA K++ ++ +I ++ GG GY+ E +AR Y ++ A +I G+ Sbjct: 318 DAAKG-------KWYVSELQHRLIDRCLQLHGGYGYMLEYPVARAYLDTRAQTIYGGTTE 370 Query: 449 AM 450 M Sbjct: 371 IM 372 >gi|284045466|ref|YP_003395806.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283949687|gb|ADB52431.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 27/291 (9%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 + T + W P+ S E + +GLTE G+D+AA+ + + DG Sbjct: 103 LATEEQQERWLPRFCSGE-------------LVTAIGLTEPDAGSDLAALRTSAARDGDG 149 Query: 225 IYCLSGHKWFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 + ++G K F+++ +S +++A G G + +E G+P G +KIG Sbjct: 150 -WVINGSKTFITNGLSADLVVVAARTSSGERGKGITLFAVEHGTP-GFSRGAKLDKIGQV 207 Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 T EL F + ++G++++ + + L +A +++ R +L + + Y Sbjct: 208 EADTGELFFEDARVPAENVIGEVDMGFRLMMERLPQERLSAACSNLAHAREALDQTLRYV 267 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + ++ IA++ ++ A D + + I A Sbjct: 268 DERRAFGRRIGSFQHIRFGIAELVTELDVTQAY-------VDRCLAAHAAGEFTAIDAAK 320 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 K+W ++ V+ ++ GG GY+ E +AR + ++ I GS M Sbjct: 321 VKWWSAEVQNRVLDACVQYHGGYGYMREYDVARAWTDARVTKIWAGSNEIM 371 >gi|62510645|sp|Q8HXX8|GCDH_MACFA RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial; Short=GCD; Flags: Precursor gi|23574728|dbj|BAC20590.1| glutaryl-CoA dehydrogenase [Macaca fascicularis] Length = 438 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256 GLTE G+D +++ ++ + S+ Y L+G K W +SPM+D F++ A+ E GR+ F Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGRIRGF 236 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLG--DLNVSTG 307 LLE G GL R++ K R++AT VE+ N L G L S G Sbjct: 237 ----LLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN---MLPGASSLGGSFG 288 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + + + I A + L A YA R G L ++++ +AD+ +I Sbjct: 289 CLNNGRYGI----AWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEIT 344 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +L D+ K+ E M + K C A + +A + +GG+G +E Sbjct: 345 LGLHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDE 397 Query: 428 RSIARH 433 + RH Sbjct: 398 YHVIRH 403 >gi|94313352|ref|YP_586561.1| Butyryl-CoA dehydrogenase [Cupriavidus metallidurans CH34] gi|93357204|gb|ABF11292.1| acyl-CoA dehydrogenase(Butyryl-CoA dehydrogenase) [Cupriavidus metallidurans CH34] Length = 388 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 33/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D+A I+ + + D + ++G+K++ + FI+ V R + P+ Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGNKYWCTFADQSDFIL---VICRTDPVIDPKA 178 Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303 G P G + +K KIG T EL F N ++G+ Sbjct: 179 RHKGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFY 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++T +E + +A S+ + SL ++I YA+ R G + + ++ +AD+A Sbjct: 239 LTTAGLETARA----HTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMA 294 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A+ AL + + DE EA+ ++ A +M V +E ++ GG+G Sbjct: 295 TQIEASRALLYTVCEKIDEGVRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y + R++R++ I G+ Sbjct: 348 YTTHFAAERYWRDARLTKIFEGT 370 >gi|291522091|emb|CBK80384.1| butyryl-CoA dehydrogenase [Coprococcus catus GD/7] Length = 381 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 35/269 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG---- 254 GLTE G+D+A + K D Y ++G K F + S +D F++ A + G Sbjct: 124 FGLTEPDAGSDVAGARTVAVKDGDE-YVINGSKIFTTNSGFADTFLVFALTDKAAGPHKG 182 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 FLV R + G+ Q ++G R + E+ +++ LLG G Sbjct: 183 MSAFLVDR-----NTPGITVQPDIKRMGIRGASNSEVVYTDVRVPASDLLG------GEG 231 Query: 310 EDMKILIY-LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + KI + LD + ++ V LA EAI Y + R G + + IA++ Sbjct: 232 KGFKIAMKALDGGRIGIAAQSVGLAQGALDEAIAYCKERKQFGKPITAFQNTQFRIAELQ 291 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L++R A + D + + AA A+++A C+ A ++ +GG G Sbjct: 292 ARIDAARLLTWRAAVAKDNGEPYNVYAAEAKLVASDVANDVCRAA-------VQFMGGYG 344 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVL 452 Y E + R R+ I G+ M + Sbjct: 345 YCREYGVERKLRDVKITEIYEGTSEVMKM 373 >gi|260219862|emb|CBA26819.1| Probable isovaleryl-CoA dehydrogenase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 338 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 42/278 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253 +G++E GG+D+AA+ + +K G Y ++G K W + +D +LA EG V Sbjct: 77 IGVSEVTGGSDVAALKTTARK-DGGDYVINGSKMWITNGMQADWCCLLANTSEGAVHKNK 135 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGD 301 +VP G+ Q+++ KIG S+ T +L F N GF+L Sbjct: 136 SLIIVPM-----DAPGITRQKIE-KIGMHSSDTAQLFFDNVRVPQRNLIGQEGMGFMLQM 189 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L E+ L A S+ + + I Y R+R G +++ V+ +A+ Sbjct: 190 LQFQ----EE-----RLYGAASSLRSLDNLINLTIDYTRQRQTFGQPILNNQVVHFRLAE 240 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + ++ AL++R + K ++ A+ A++ A +++ V ++ GG Sbjct: 241 LRTEVECLRALTYRAVEQYVGGKDVTKLASMAKLKAG-------RLSREVTDSCLQYWGG 293 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 G+ + I++ YR+S SI G + ++L ++ LE Sbjct: 294 MGFTADNPISQAYRDSRLISI-GGGADEIMLGIICKLE 330 >gi|260462066|ref|ZP_05810311.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032313|gb|EEW33579.1| acyl-CoA dehydrogenase domain protein [Mesorhizobium opportunistum WSM2075] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 31/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E R G+D+A + DG Y L+G K W + ++D +++ A+ G + Sbjct: 125 FALSEPRSGSDVANTEMTATRDGDG-YVLTGEKTWISNGGIADLYVVFARTGEAPGAKGL 183 Query: 259 PRLLEDGSPNGL-CYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 L G GL +RL+ + + S V L S G P + + Sbjct: 184 SAFLVPGDAKGLGIAERLEVIAPHPLARLSFDQVRLPASALIG----------KPGDGFR 233 Query: 314 ILIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + + S G R +L E+I R + G + + +++ IAD+ALD+ Sbjct: 234 IAMSVLDVFRSTVGAAALGFARRALDESIKRVAERKLFGAPMGELQMVQGHIADMALDVD 293 Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A + D +R + EAA A++ A A VI +A++ GG+G + Sbjct: 294 AAALLIYRAAWTKDMGAARVTREAAMAKLFA-------TDKAQEVIDKAVQLHGGNGVRK 346 Query: 427 ERSIARHYRESPANSILLGSGN 448 + YRE A I G+ + Sbjct: 347 GHIVESLYREIRALRIYEGASD 368 >gi|302527299|ref|ZP_07279641.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302436194|gb|EFL08010.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 28/270 (10%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE 250 M + + + LTE GG+D+ A+ + DG Y ++G K ++S+ I L + Sbjct: 111 MAEGRIRATMALTEPGGGSDLQAMRTHAVPGDDG-YTITGSKTWISNAAHSGLIGLLCIT 169 Query: 251 GRVGC----FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDL 302 R + L+E G +GL + K+G R EL F L G Sbjct: 170 DREASPAHRGMSVLLVEPG--DGLTISKKLPKLGYRGVEACELVFDGRKVPADAVLGGTP 227 Query: 303 NVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 N G + M+ L I + S + V + +L +A+ YA+ R G + + Sbjct: 228 N--QGWSQMMRGLEVGRIQVASRALGVG--QAALNDAVRYAQERESFGKPIWKHQSVGNL 283 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A + AA L+ A D + EA A++ A T A V +A+ Sbjct: 284 LADMATKMRAARLLTLDAAEKLDAGERADMEAGMAKLFASET-------AMQVALDAIRV 336 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGN 448 GG GY +E + R++R++P +++G G Sbjct: 337 HGGYGYSKEYDVERYFRDAPL--MIVGEGT 364 >gi|261419890|ref|YP_003253572.1| butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61] gi|319766705|ref|YP_004132206.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52] gi|261376347|gb|ACX79090.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC61] gi|317111571|gb|ADU94063.1| Butyryl-CoA dehydrogenase [Geobacillus sp. Y412MC52] Length = 392 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250 +TE G+D I K D + L+G K F++ F+M+ + Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNDADFVMVIAITDKERHQASN 184 Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 GR G CF+V R + +P L ++ ++ N EL G+ Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 LG L ++ A V V AE AI YA+ R G + ++ Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ IAD A++I AA L A + D+ + R +A + K + M V+ Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY +E I R YRE+ I G+ L + L KG Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384 >gi|86740944|ref|YP_481344.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3] gi|86567806|gb|ABD11615.1| butyryl-CoA dehydrogenase [Frankia sp. CcI3] Length = 383 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 62/318 (19%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP ++W P + S GLTE G+D A T ++ G + Sbjct: 104 TPAQREEWLPSLAS-------------GRALAAFGLTEPDAGSD-AGGTRTTARLDGGDW 149 Query: 227 CLSGHKWFLSSPMSDA--FIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKN 277 ++G K F+++ +D + + V GR + LVP + G G Y + Sbjct: 150 IINGSKAFITNSGTDITRLVTVTAVTGRTPAGHKEISSVLVP-VPTPGFTAGPAY----S 204 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGM 328 K+G ++ T L F D+ V P E++ L LD +++S + Sbjct: 205 KVGWHASDTHPLTFD--------DVRV---PAENLLGARGRGFANFLQILDEGRIAISAL 253 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 V LA E++ YA++R G P+ + IA IA A ++ ++ +A Sbjct: 254 AVGLAQACVDESVKYAKQREAFGA-----PIGRNQA--IAFKIAEMEARTYVARAAYYDA 306 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 SR + A + K + + A EA + GG G++ E +ARH+R+ A + Sbjct: 307 ASRMLAGLPVKKEAAMAKLFSSEAAVTNAREATQIHGGYGFMNEYPVARHWRD--AKILE 364 Query: 444 LGSGNAMVLDVLNLLEKG 461 +G G + V +L E G Sbjct: 365 IGEGTSEVQKMLIARELG 382 >gi|17538396|ref|NP_500720.1| IsoValeryl-CoA Dehydrogenase family member (ivd-1) [Caenorhabditis elegans] gi|2702376|gb|AAB92016.1| Hypothetical protein C02B10.1 [Caenorhabditis elegans] gi|4455127|gb|AAD21088.1| isovaleryl-CoA dehydrogenase precursor [Caenorhabditis elegans] Length = 419 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E + G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGD-KYVLNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 217 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFLV E +P G +K+G R + T EL F N + + + G + + Sbjct: 218 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGKGKGVY 269 Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ LD + +SG M+ + A YA +R G + +++ +AD+ + Sbjct: 270 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 329 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + + +A + D+ +++ A + + + V +A++ +GG+GYI + Sbjct: 330 ASRSYLYMVAKAADKGNVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 382 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ I G+ L + L K Sbjct: 383 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 415 >gi|311069015|ref|YP_003973938.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] gi|310869532|gb|ADP33007.1| short chain acyl-CoA dehydrogenase [Bacillus atrophaeus 1942] Length = 377 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 33/288 (11%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S EY +G LTE G+D +I + K +G Sbjct: 101 TEEQKRKYIPKLASGEY--------------LGAFALTEPYSGSDAGSIRTTAVK-KNGK 145 Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+++ +D ++ A E G + + + G + + K+G + Sbjct: 146 YVLNGSKMFITNGGAADTYVTFALTEPGKGTRGISAFIVEKDTPGFIIGKKERKMGLHGS 205 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEA-----IHY 338 T EL F N + N+ E KI L LD + ++ + +AEA + Y Sbjct: 206 NTTELIFDNA---EIPAENLLGQEGEGFKIALANLDVGRIGIAAQGLGIAEAALDYSVQY 262 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +++R G + + +AD+A A+ L + A+ + +EA+ A+ A Sbjct: 263 SKQRVQFGRPIASNQAISFKLADMATRAEASKHLVYHAADLHNRGLKCGKEASMAKQFAT 322 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 T M A+ +A++ GG GY ++ + R +R++ I G+ Sbjct: 323 DT-----AMKAAI--DAVQIYGGYGYTKDYPVERLFRDAKVTQIYEGT 363 >gi|254819187|ref|ZP_05224188.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length = 397 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 30/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RV 253 ++E G+D+AAI ++ ++ DG Y + G K +L++ + + ++ EG + Sbjct: 129 MSEPELGSDVAAIRTRARRNDDGTYTIDGQKMWLTNGATATLVATLVRTDEGSDKPHRNL 188 Query: 254 GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED- 311 FLV + + G GL +K+G + T E+ F G+ G +V G Sbjct: 189 TAFLVEKPVGFGEVVPGLRIPGKIDKLGYKGIETTEMIFD---GYQAGADDVLGGATGQG 245 Query: 312 -MKILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +++ ++ ++VS G+R + A+ YA++R G + + + +A++A Sbjct: 246 FFQMMDGIEVGRVNVSARACGVGLR-AFELAVRYAQQRETFGKPIAEHQAIAFQLAEMAT 304 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA + A D + + A + KY C + V ++ GG GY Sbjct: 305 KVEAAHLMMVNAARLKDSGERND-------VAAGMAKYLCSEYCAEVTQQSFRIHGGYGY 357 Query: 425 IEERSIARHYRESPANSILLGSGNAMV 451 +E I R R++P +L+G G + + Sbjct: 358 SKEYEIERLMRDAP--FLLIGEGTSEI 382 >gi|239820442|ref|YP_002947627.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] gi|239805295|gb|ACS22361.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 388 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 20/279 (7%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-- 248 M + + +TE GTD+ I +Q ++ G + +SG K F+++ M + +A Sbjct: 120 MASGELVAAIAMTEPGAGTDLQRIKTQARR-DGGHWRISGSKTFITNGMHAGLVCVAART 178 Query: 249 --VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN 303 G G L+ ++E +G L +K+G ++ T EL F + LLG Sbjct: 179 DAAAGGKGISLL--MVETEGTSGFRRGPLLDKMGQKTLDTTELFFDDVRVPADHLLGG-E 235 Query: 304 VSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G + M+ L L A+ +V+ M+ ++ + + Y R R V G L+ + +A+ Sbjct: 236 EGRGFAQLMQQLPRERLLIAVGAVATMQRAIGDTLGYVRDRQVFGEPLLKMQNTRFKLAE 295 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A A D+ +R + A + K+W ++ E ++ GG Sbjct: 296 CETQAQVARAF-------VDDCIARLMQGELDVPTAAMAKWWTTDACCRIVDECLQLHGG 348 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 G++ E +AR Y + I G+ M + +EK Sbjct: 349 YGFMNEYPVARLYADVRVGRIYGGANEVMKEIIARAMEK 387 >gi|31789453|gb|AAP58567.1| putative acyl-CoA dehydrogenase [uncultured Acidobacteria bacterium] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 26/257 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFLV 258 GLTE G+D + S + +G + ++G K F++ + +D + +A + + + Sbjct: 124 GLTEPGAGSDASGTRSTAVR-QNGGWLVNGSKNFITHAIHADTCVAVAVTDREKKSRGIS 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN----VSTGPVEDMKI 314 + E G+P G + +NK+G R++ T + F + L+ D N G + M+I Sbjct: 183 AFIFEKGTP-GFSPAKKENKLGLRASETASVIFEDC---LIPDENRLGEEGQGFINAMEI 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L D +S++ + V +A+ A+ Y++ R G + + ++ +A++A I AA Sbjct: 239 L---DGGRISIAALAVGIAQGAYESALSYSKERKQFGKAISEFQAIQFKLANMATQIDAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +R A D + ++E++ A++ + +++ V EA++ GG GY ++ Sbjct: 296 RLLMYRAAWMKDNGRKTTKESSMAKLFS-------SEISVNVCEEAIQIHGGYGYTKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + +R+S +I G+ Sbjct: 349 PEKFWRDSKLCTIGEGT 365 >gi|119716086|ref|YP_923051.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119536747|gb|ABL81364.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length = 608 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 66/328 (20%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-------YCLSGHKWFLSSPMSD-----AFIMLAQV 249 L+E + G+ ++ IT++ DG Y L+G+K ++S+ D ++LA+ Sbjct: 164 LSESQAGSSLSDITTRAVPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKT 223 Query: 250 EGRVGC----------FLVPRLLEDGSP-----NGLCYQRLKNKIGNRSNATVELEFSN- 293 G G F+VP+ L D + N + L +K+G R L F + Sbjct: 224 PGPDGAIDPSTKGISLFVVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDG 283 Query: 294 ---------TFGFLLGDLNVSTGPVEDM----KILIYLDSAIMSVSGMRVSLAEAIHYAR 340 G+L+G+ + M +I I L +A + +G SL YA+ Sbjct: 284 TWEPQGGKGAVGYLVGEPGQGLRQMFHMMNAARIEIGLGAAALGFAGYAASL----DYAK 339 Query: 341 RRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE-AKSR 386 R + L++ +KR + AL A DE A Sbjct: 340 SRRQGRPLTRSGKDATQPQVPLVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGT 399 Query: 387 SEEAAYA----RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 E+ A A I+ P+ K W + + A++ +GGSGY + + +++R++ N I Sbjct: 400 PEQVAEAGRLLEILTPVVKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMI 459 Query: 443 LLGSGNAMVLDVLN---LLEKGTNLFEQ 467 G+ LD+L LE G L Q Sbjct: 460 HEGTHGIQALDLLGRKIRLEGGAYLAAQ 487 >gi|53723050|ref|YP_112035.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|76818683|ref|YP_336307.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b] gi|167743960|ref|ZP_02416734.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 14] gi|167821140|ref|ZP_02452820.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 91] gi|167899589|ref|ZP_02486990.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 7894] gi|167907904|ref|ZP_02495109.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei NCTC 13177] gi|167916265|ref|ZP_02503356.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei 112] gi|167924104|ref|ZP_02511195.1| predicted acyl-CoA dehydrogenase [Burkholderia pseudomallei BCC215] gi|254185800|ref|ZP_04892318.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254262945|ref|ZP_04953810.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] gi|254300854|ref|ZP_04968298.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|52213464|emb|CAH39510.1| putative acyl-CoA dehydrogenase [Burkholderia pseudomallei K96243] gi|76583156|gb|ABA52630.1| predicted acyl-CoA dehydrogenases [Burkholderia pseudomallei 1710b] gi|157811391|gb|EDO88561.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 406e] gi|157933486|gb|EDO89156.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254213947|gb|EET03332.1| acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710a] Length = 383 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ D Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGDD-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R R + G ++D ++ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R YR++ SI G+ M+ Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370 >gi|331269784|ref|YP_004396276.1| acyl-CoA dehydrogenase domain-containing protein [Clostridium botulinum BKT015925] gi|329126334|gb|AEB76279.1| acyl-CoA dehydrogenase domain protein [Clostridium botulinum BKT015925] Length = 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 GLTE GTD A +Q + DG Y L+G K F++ SP+++ F++ A + G Sbjct: 123 FGLTEPNAGTD--ASGAQTVAVRDGDNYILNGQKCFITNSPLAETFVIFAITDRSKGTKG 180 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + + + G+ ++++K+G R E+ + LLG G MK Sbjct: 181 ISAFIVEKDFPGISIGKIEDKMGIRGAQVGEIILEDCVVPAENLLGKEGRGFGIA--MKT 238 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LD + V+ + LAE A Y + R G L + +AD+ + I + Sbjct: 239 ---LDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDVRIEQS 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L + A ++ + S AA A++ C A V EA++ GG GYI++ Sbjct: 296 RHLLYLAAMDKNDGRPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGYIKDYP 348 Query: 430 IARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 VERMMRDAKITQIYEGT 365 >gi|290985718|ref|XP_002675572.1| acyl-CoA dehydrogenase family member [Naegleria gruberi] gi|284089169|gb|EFC42828.1| acyl-CoA dehydrogenase family member [Naegleria gruberi] Length = 315 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 32/278 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSP-MSDAFIMLAQVEGR-----VG 254 LTE G+D ++ + + + G + LSG K F+S SD ++++A+V + Sbjct: 47 LTEPNSGSDAGSLRTIARTLDGGKTFTLSGEKAFISGGGNSDVYLIMARVMDNDKDLGIT 106 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTG 307 CF+V + + GL + + + K+G + T V++ N G + ++ Sbjct: 107 CFIVEK-----NSEGLSFGKNEIKMGWNTQPTRAVIMDSVKVTSDNILGSVGEGFKIAMQ 161 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ +I I A SV G + L A Y R G L + ++ +AD+A + Sbjct: 162 GLDGGRINI----ATCSVGGAQQCLNMAGEYLHTRKQFGKTLSNFQYLQFKLADMATRVH 217 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ RL + E+++++ + K + V+ ++++ GG GY+ E Sbjct: 218 AS-----RLMVRSAATQLGIEKSSHSTAFCAMAKRFATDECFDVVNDSLQMFGGYGYLNE 272 Query: 428 RSIARHYRESPANSILLGSGNAMVLDV----LNLLEKG 461 + R+ R+ + IL G+ M L LNL + G Sbjct: 273 YGVERYLRDLRVHCILEGTNEVMRLITSRYYLNLYKDG 310 >gi|85710583|ref|ZP_01041647.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1] gi|85687761|gb|EAQ27766.1| probable acyl-CoA dehydrogenase [Erythrobacter sp. NAP1] Length = 380 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 42/270 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIY-CLSGHKWFLSSPM-SDAFIMLAQV---EGRVG 254 + +TE G+D+ I + I DG + ++G K ++++ +D I++A+ EG G Sbjct: 126 IAMTEPGTGSDLQGIKTTA--IEDGNHLVVNGSKTYITNGQNADVVIVVAKTNPAEGAKG 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLG 300 LV L++ G+P G R +KIG S T EL F++ F L+ Sbjct: 184 TSLV--LVDAGTP-GFEKGRNLDKIGQHSADTSELFFADVRVPKTNILGGEGRGFIHLME 240 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 +L P E + I A+ + +G + + EA+++ + R G + + K +A Sbjct: 241 EL-----PQERLSI------AVSAQAGAQRAFDEAVNFTKDRKAFGTTVFEFQNTKFTLA 289 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ + A D A +R A K W +M ++ ++ G Sbjct: 290 DLKAKLQVGWA-------HLDWAIARHLRGELTTDEASAAKLWHTEMQWEMVDACLQLHG 342 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G+GY+ E +IAR +R++ I G+ M Sbjct: 343 GAGYMNEYAIARLWRDARVARIYGGTSEIM 372 >gi|254283365|ref|ZP_04958333.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium NOR51-B] gi|219679568|gb|EED35917.1| acyl-coa dehydrogenase family member 8 [gamma proteobacterium NOR51-B] Length = 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 34/313 (10%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 + SM+ T V ++W P + + T +A LTE G+D A++ + Sbjct: 93 ATSMIGKYCTEAVIEEWCPDL------------VMGTKLA-SYCLTEPGAGSDAASLRTS 139 Query: 218 GQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 D Y ++G K F+S +++ G G + +L G+ Y + + Sbjct: 140 AAADGDD-YVINGSKVFISGAGETDVLVVMLRTGDAGPKGISAVLIPADAEGISYGKNEE 198 Query: 278 KIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 K+G ++ T + F +N G ++ ++ +I I A S+ + Sbjct: 199 KMGWKAQPTRMVTFEDVRIPKTNRLGEEGQGFAIAMEGLDGGRINI----ATCSIGTAQK 254 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE- 389 +L +A Y + R + D + +AD+A D+ AA + A D S++ Sbjct: 255 ALEDATAYTQERKQFNSAIADFQATQFKLADMATDLVAARQMVRLAAWKLDNKDSQATTY 314 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 A A+ A + C +A++ GG GYI+E + R+ R++ + IL G+ Sbjct: 315 CAMAKRFATDAGFTICN-------DALQLFGGYGYIKEYPLERYVRDTRVHQILEGTNEI 367 Query: 450 M-VLDVLNLLEKG 461 M V+ LL +G Sbjct: 368 MRVIIARRLLMEG 380 >gi|159185757|ref|NP_357132.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] gi|159140891|gb|AAK89917.2| acyl-CoA dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 390 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ D Y L+G K W + +D ++ A+ + G + Sbjct: 131 LAMSETEAGSDVVSMRLKAERKGD-RYVLNGAKMWITNGHEADTLVVYAKTDMSAGARGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG LN G M L Sbjct: 190 TAFLIEKGFKGFRPAQKLDKLGMRGSPTSELVFEDCEVPEENILGRLN--DGVTVLMSGL 247 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 Y + A+++ V M+ ++ + Y R R G + + +++ +ADI + A+ A Sbjct: 248 DY-ERAVLAAGPVGIMQAAIDLVLPYVRERKQFGKAIGEFQLVQGKLADIYSAMNASRAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA A + A + A V +A++ +GGSGY+ E R Sbjct: 307 VYAVARACDNGRITRQDAAGAILFA-------AERATQVALDAIQLLGGSGYVNESPAGR 359 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 360 LLRDAKLYEIGAGT 373 >gi|298242757|ref|ZP_06966564.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297555811|gb|EFH89675.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 384 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 17/254 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D AA+ + + D Y L+G K F+++ ++ + A + + G + Sbjct: 123 FGLTEAGSGSDAAAMQTFAVRKGDK-YTLNGSKRFITNGGLAQVNTIFAITDPQAGTRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + + G R+++K+G + + T EL F N + N+ G E KI + Sbjct: 182 SAFIVEKDFPGFSVGRIEDKMGIKGSQTAELIFENC---EVPVENLLGGEGEGFKIAMRT 238 Query: 318 LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + + + +A+ A+ YA++R + + ++ +AD+A + AA L Sbjct: 239 LDRTRIGIGAQALGIAQGALDLAVAYAKQRVQFKKPIAENQGIQFMLADMATKVEAARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D+ + + + + K + A V +A++ +GG GY++E R Sbjct: 299 VYHASELVDDGDEQFSK------YSSMAKMFASDAAMDVTNDAIQVLGGYGYMKEYPAER 352 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 353 MLRDAKITQIYEGT 366 >gi|302415387|ref|XP_003005525.1| short-chain specific acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102] gi|261354941|gb|EEY17369.1| short-chain specific acyl-CoA dehydrogenase [Verticillium albo-atrum VaMs.102] Length = 441 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 31/270 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ + +DG Y +SG K W +S +D FI+ A ++ G + Sbjct: 188 LSEPVSGSDAFAMATKATETADG-YTISGGKMWITNSMEADFFIVFANLDHSKGYKGITA 246 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------- 312 + + G + + K+G ++++T + L D+ + P E++ Sbjct: 247 FVVEKGTEGFSIAKKEKKLGIKASSTCVIN--------LDDVKI---PKENLLGEKGQGY 295 Query: 313 KILI-YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 K I L+ + ++ LA + G ++ + M+ IA +IAAA + Sbjct: 296 KYAISLLNEGRIGIAAQMTGLALGSWENAVKKQFGKLVGEFQGMQHQIAQSYTEIAAARS 355 Query: 372 LSFRLANSFDEAKSRSEEAAYARIM-APITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L + A R +EA +M A + K + ++A V A+E +GG G++ + Sbjct: 356 LVYNAA--------RKKEAGEDFVMDAAMAKLYASQVAGRVSGLAIEWMGGMGFVRDGPA 407 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +R+S +I G+ N + + LL+K Sbjct: 408 EKFWRDSKIGAIYEGTSNIQLNTIAKLLQK 437 >gi|228469380|ref|ZP_04054394.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis 60-3] gi|228309064|gb|EEK17694.1| acyl-coa dehydrogenase, short-chain specific [Porphyromonas uenonis 60-3] Length = 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS- 236 F E + P + IG GLTE GTD +A + + + Y L+G+K F++ Sbjct: 101 FGTEEQKQHYLPKLASGEWIGAFGLTEPNAGTDASAQQTFAVE-EEECYILNGNKIFITN 159 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 + + +I+ A + G + + + G + + K+G R +AT EL N Sbjct: 160 AEYAHVYIIFAMTDKSKGNKGISAFIVEKDDPGFSVGKHELKLGIRGSATCELIMENCRI 219 Query: 295 -----FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGIL 349 G + G V+ ++ +I I A ++ R ++ E + Y + R G + Sbjct: 220 PKDRLLGKVGGGFKVAMHTLDGGRIGI----AAQALGIARGAMDETVKYTKERKQFGRSI 275 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 + +AD+ I A+ L R A D S + EAA A++ +C + A Sbjct: 276 AKFQNTQFQLADLKARIDCASLLVRRAAWCKDNGLSYNLEAAEAKL-------FCAETAM 328 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + +A++ GG GY E + R R++ I G+ Sbjct: 329 DMTTKAVQFHGGYGYTREYPVERMMRDAKITEIYEGT 365 >gi|167840722|ref|ZP_02467406.1| acyl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 383 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 +G++E G+D+A+I + ++ + Y +SG K W + +D LA R Sbjct: 123 IGVSEPGAGSDVASIRTSARRDGND-YVISGTKLWITNGTQADWMCCLANTSDGPPHRNK 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 +V L G+ ++ KIG S+ T ++ F + +L G ++ Sbjct: 182 SLIVVPL----KSKGVHIEKKIRKIGMHSSDTAQIFFDDVR-VPRRNLIGEEGQGFTYQM 236 Query: 315 LIYLDSAIMSVSGMRV----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + + + + V S+ E I Y R+R + G ++D V+ +A++ ++ A Sbjct: 237 LQFQEERLYGAAAALVVLDRSIDETIDYTRQRKIFGRPVLDHQVVHYRLAELKTEVEALR 296 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL++R + + + A+ A++ A ++A V ++ GG G+ E SI Sbjct: 297 ALTYRATELYVQGGDVTTLASMAKLKA-------GRLAREVTDSCLQFWGGMGFAWESSI 349 Query: 431 ARHYRESPANSILLGSGNAMV 451 +R YR++ SI G+ M+ Sbjct: 350 SRTYRDTRLFSIGGGADEVML 370 >gi|119476369|ref|ZP_01616720.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119450233|gb|EAW31468.1| probable acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 591 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 43/284 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIMLAQV------E 250 + LTE G+D+A I S D Y ++G K +++ M++ + L E Sbjct: 162 MNLTESDAGSDLAVIRSSALPEKD-YYRINGTKIYITWGDHQMTENVVHLVLARTPNAPE 220 Query: 251 GRVGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 G G FLVP+ L DGS N + +++K+G + T + F G+L+G Sbjct: 221 GVKGISLFLVPKFLVNSDGSIGDRNDVYAVSVEHKLGIHGSPTCVMSFGENEGAIGYLIG 280 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE----AIHYARRRHVSG--------GI 348 + N + ++ A ++V G V++++ + V G G Sbjct: 281 EENKGLA-----YMFTMMNHARLNVGGQGVAVSDRAYQQAAAYAKDRVQGQAPGDREKGS 335 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEA------KSRSEEAAYARIMAPITKY 402 +I P ++R + + A+ AL + +++FD A + R+ ++ PI K Sbjct: 336 IIRHPDVRRMLMVMRSLTEASRALCYVTSSAFDHAHHAVDKQERTLANFRGELLTPIAKG 395 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W ++A V + ++ GG G+IEE A+ R++ +I G+ Sbjct: 396 WSTEVAQEVSSLGLQVHGGMGFIEETGAAQFMRDARITTIYEGT 439 >gi|56420189|ref|YP_147507.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|56380031|dbj|BAD75939.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] Length = 392 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250 +TE G+D I K D + L+G K F++ F+M+ + Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNEADFVMVIAITDKERHQASN 184 Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 GR G CF+V R + +P L ++ ++ N EL G+ Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 LG L ++ A V V AE AI YA+ R G + ++ Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ IAD A++I AA L A + D+ + R +A + K + M V+ Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY +E I R YRE+ I G+ L + L KG Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384 >gi|148259868|ref|YP_001233995.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|326403204|ref|YP_004283285.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301] gi|146401549|gb|ABQ30076.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5] gi|325050065|dbj|BAJ80403.1| glutaryl-CoA dehydrogenase [Acidiphilium multivorum AIU301] Length = 408 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + +G GLTE G+D ++ ++ +K+ DG Y L+G K W + Sbjct: 131 FGSEAQKDKYLPKLRAGEWVGCFGLTEPDAGSDPGSMRTRAKKV-DGGYILNGSKTWISN 189 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D ++ A+ EG + FLV R GL +++ K R++ T + S+ F Sbjct: 190 SPIADVCLVWAKDDEGVIRGFLVDR-----GSKGLETPKIEGKFSLRASVTGMIMLSDVF 244 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 +L + GP L++A ++ + AE +A R++ + + Sbjct: 245 VPEDHMLPGVKGLRGPFS------CLNNARYGIAWGALGAAEFCWHAARQYTLDRKMFGR 298 Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 P ++++ +AD+ +I + RL D ++ E M + K C Sbjct: 299 PLAATQLVQKKLADMQTEITLGLQGALRLGRLLDAGEAAPE-------MISLMKRNNCGK 351 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + + A + GG+G ++E + RH Sbjct: 352 SLDIARLARDMHGGNGIVDEYHVIRH 377 >gi|16124682|ref|NP_419246.1| acyl-CoA dehydrogenase [Caulobacter crescentus CB15] gi|221233375|ref|YP_002515811.1| short-chain specific acyl-CoA dehydrogenase [Caulobacter crescentus NA1000] gi|13421592|gb|AAK22414.1| acyl-CoA dehydrogenase, putative [Caulobacter crescentus CB15] gi|220962547|gb|ACL93903.1| acyl-CoA dehydrogenase, short-chain specific [Caulobacter crescentus NA1000] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 29/255 (11%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE--- 250 +V LTE G+D AA+ ++ + D Y L+G K ++++ + F ++A+ Sbjct: 117 AVITSFALTEPEAGSDSAAVQTRATRDGDD-YILNGSKRYITNAGKASLFTVMARTNPDA 175 Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 V FLVPR L GL + + K+G + ++ F N + N Sbjct: 176 KGGAGVSAFLVPRDLP-----GLTVGKPEKKMGQQGAHIHDVTFDNV---RVPAWNRLGA 227 Query: 308 PVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 E K+ + LD + ++ + V +AE + YA R G + +++ IAD Sbjct: 228 EGEGFKVAMQVLDRGRLHIAAVCVGVAERLIADCVAYASERKQFGQPIASFQLIQAMIAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + AA AL A D + + EAA +K + +M V A++ GG Sbjct: 288 SKTEALAAKALVLETARKRDAGVNVTLEAAS-------SKLFASEMVGRVADRAVQVFGG 340 Query: 422 SGYIEERSIARHYRE 436 +GY+ + I R YR+ Sbjct: 341 AGYVADYGIERLYRD 355 >gi|297530150|ref|YP_003671425.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3] gi|297253402|gb|ADI26848.1| Butyryl-CoA dehydrogenase [Geobacillus sp. C56-T3] Length = 392 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 55/288 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV---------E 250 +TE G+D I K D + L+G K F++ F+M+ + Sbjct: 126 FAMTEPGAGSDTRNIKMTAVKDGDE-WVLNGEKTFITGGNEADFVMVIAITDKERHQASN 184 Query: 251 GRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFL 298 GR G CF+V R + +P L ++ ++ N EL G+ Sbjct: 185 GREGVTCFIVDREMGWRSEPIHTMGPSTPASLIFENVRVP---EENILGELHH----GYK 237 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQP 353 LG L ++ A V V AE AI YA+ R G + ++ Sbjct: 238 LG--------------LEWIGYARWVVGARAVGAAERLLQMAIDYAKERVTFGKPIAERQ 283 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ IAD A++I AA L A + D+ + R +A + K + M V+ Sbjct: 284 AIQWMIADSAVEIEAAKWLVLNAAFTLDQGEDN-------RHLASMAKLFGANMGNRVVD 336 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY +E I R YRE+ I G+ L + L KG Sbjct: 337 RVMQIHGGMGYTKEMPIERWYREARLWRIYDGTDEIQRLIIARNLIKG 384 >gi|254501549|ref|ZP_05113700.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222437620|gb|EEE44299.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249 L +TE G+D+ + Q + G + ++G K F+S + +D FI+ Sbjct: 122 LAMTEPDAGSDVRGMKCQAVR-DGGDWVINGSKHFISGAEHADFFIVFVATGVDETPKGP 180 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + R+ CFLV R G+P G + N + ++ L F +LG+++ Sbjct: 181 KKRITCFLVDR----GTP-GFEVRDGYNSVSHKGYKNYILYFDQCRLPNAQVLGEVD--- 232 Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G E M +Y L A MSV R A++YA R G + + +AD+ Sbjct: 233 GGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQSIAKFQGISFQVADMI 292 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA L+ A D++ + E A A++ A +M V ++ GG G Sbjct: 293 TEIDAADWLTLAGAWRLDQSLPANREIASAKVYA-------TEMLARVTDTTLQIFGGMG 345 Query: 424 YIEERSIARHYRESPANSILLGS 446 +++ I R +R++ I G+ Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368 >gi|68146493|emb|CAH10179.1| ChaO protein [Streptomyces chartreusis] Length = 388 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 26/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GRV 253 + LTE GG+D+ A+ + ++ DG Y ++G K W +S S +L + + Sbjct: 124 MALTETGGGSDLQAMRTVARREGDG-YVVNGAKTWITNSRRSRLIALLCKTDPDAEPAHS 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 G ++ L+E G GL R K+G + + EL F N LLG + G + Sbjct: 183 GMSVL--LVEHGP--GLTVSRDLPKLGYKGVESCELSFENHRARADALLGGVE-GHGFAQ 237 Query: 311 DMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M+ L L A ++ R +L +A+ YA+ R G + + +AD+A + A Sbjct: 238 MMRGLETGRLQVAARALGVGRAALEDALAYAQERESFGKPIWQHQSIGNYLADMATSLTA 297 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L+ A R+E + A + K + + A + A+ GG GY E Sbjct: 298 ARQLTLYAAR-------RAEAGHRVDMEAGMAKLFASETAMQIALNAVRIHGGYGYSTEF 350 Query: 429 SIARHYRESPANSILLGSGN 448 + R++R++P +++G G Sbjct: 351 DVERYFRDAPL--MIVGEGT 368 >gi|302816175|ref|XP_002989767.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii] gi|300142544|gb|EFJ09244.1| hypothetical protein SELMODRAFT_428295 [Selaginella moellendorffii] Length = 393 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 35/261 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ G Y L+G+K W + P+++ I+ A+ + G + Sbjct: 154 LVMSEPNSGSDVVSMKCKAERRDKG-YVLNGNKMWCTNGPVANTLIVYAKTDNSAGAHGI 212 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G + +K+G R + T EL F + F L V M + L Sbjct: 213 TAFIIEKGMEGFTTAQKLDKLGMRGSDTCELVFQDCFVPPENILGQEGKGVYVMMSGLDL 272 Query: 319 DSAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + +++ SG M+ + + Y R+R G + + +++ +AD+ + A+ AL Sbjct: 273 ERLVLA-SGPLGLMQACMDVVLPYVRQREQFGKPIGEFQLIQGKLADMYTKMQASRALVH 331 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A S D A + +A++C+GG+GY+ E R Sbjct: 332 SVARSCD--------------------------AGHIDRKAIQCLGGNGYVNEYPTGRLL 365 Query: 435 RESPANSILLGSGNAMVLDVL 455 R++ I G+G + + VL Sbjct: 366 RDAKLYEI--GAGTSEIRRVL 384 >gi|292656835|ref|YP_003536732.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] gi|291370945|gb|ADE03172.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] Length = 381 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 60/274 (21%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE----GRVG 254 GL+E G++ A +++ ++ D Y ++G K W + I+ A+ + V Sbjct: 127 FGLSEPDAGSNPAEMSTVARREGDE-YVINGKKQWITNGQRGGVCILFAKTDPDDPSSVT 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--M 312 FLVP G + + K+G R+ S+T L D+ + P E+ Sbjct: 186 QFLVPE------SAGYEVGKKEEKLGLRA--------SDTTALLFDDVRI---PAENRLT 228 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMK---- 356 + L +A ++G R+ +A +AI YA R D+P+ K Sbjct: 229 EEGKGLSAAFRILTGGRIGIASQAVGLAQAALDDAIDYANERE-----QFDKPISKIQAV 283 Query: 357 -RAIADIALDIAAATAL---SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 IAD+ + A+ L + R+A++ D+ R A I KY+ + A V Sbjct: 284 RHKIADMGTQVHASRMLVREAARVADAGDDP----------RTAASIAKYFASEAAVDVT 333 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 EA++ GG GY + + R+YR+S +I G+ Sbjct: 334 NEAVQVHGGYGYTTDFDVERYYRDSKITTIYEGT 367 >gi|145590704|ref|YP_001152706.1| butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514] gi|145282472|gb|ABP50054.1| Butyryl-CoA dehydrogenase [Pyrobaculum arsenaticum DSM 13514] Length = 410 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 21/260 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254 +TE G+D+A I ++ +K D + ++G K F+SS ++D FI+LA+ + R+ Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKKGDK-WVINGRKAFISSSDVADYFIVLARTYPPPDKRLR 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN-VSTGPVEDMK 313 + + + G ++ +K+G N EL N + D N V + + Sbjct: 191 YLGLTFFVVEKDTPGFKVEQCYHKMGLFGNHACELVLENV---EVPDENRVGEEGMGFLY 247 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + D + V+ V +A+ A Y +R G + ++ +I ++ I + Sbjct: 248 AMETFDRTRIGVAAQAVGMAQAAFEMAFRYVHQRQAFGYPIAFFQAIQFSIVEMMAKIFS 307 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++ A DE + +A + K++ ++A VI+EA+ GG G I E Sbjct: 308 ARLLTYLAAKLADEDRREF------TFVASLAKFYATEVAEEVISEAINLHGGVGVIRET 361 Query: 429 SIARHYRESPANSILLGSGN 448 + R R I G+ N Sbjct: 362 GVERFLRSVKITQIYEGANN 381 >gi|294139583|ref|YP_003555561.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12] gi|293326052|dbj|BAJ00783.1| glutaryl-CoA dehydrogenase [Shewanella violacea DSS12] Length = 391 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 28/243 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ ++I DG Y L+G K W +SP++D FI+ ++EG++ F++ Sbjct: 136 FGLTEPDVGSDPGGMRTRAERI-DGGYRLNGAKMWITNSPIADVFIVWGKLEGKIRGFIL 194 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + ++ GL +++ K R++ T E+ N LL ++ GP Sbjct: 195 EKGMK-----GLSAPKIEGKFSLRASITGEIVMDNVEVPESALLPNVEGLKGPFG----- 244 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370 L+ A ++ + AE +A R++ I ++P ++++ +AD+ T Sbjct: 245 -CLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLAANQLIQKKLADM------QT 297 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ L + ++A ++ I + C K A + A + GG+G +E + Sbjct: 298 EITLGLFTCLQAGRLMDQDALPVEAISLIKRNSCGK-ALDIARMARDMHGGNGISDEFHV 356 Query: 431 ARH 433 RH Sbjct: 357 IRH 359 >gi|260553902|ref|ZP_05826169.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] gi|260404934|gb|EEW98437.1| acyl-CoA dehydrogenase [Acinetobacter sp. RUH2624] Length = 430 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%) Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y + G K + ++D F++ A G+ F+V + G + + +G ++ Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 275 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 T L+FS+T LG + D+ L++ A+ + ++ A I YA R Sbjct: 276 ETATLKFSHTPALRLGTTDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + IAD+A++I A L A+ + K EA ARI+ C Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 385 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424 >gi|219113303|ref|XP_002186235.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] gi|209583085|gb|ACI65705.1| short chain acyl-coenzyme A dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] Length = 436 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 26/268 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR-----VG 254 GL+E G+D A + D W ++ S A I+ A + + Sbjct: 174 FGLSEPGNGSDAGAAATTATLDGDEWVVNGTKAWITNAHESGAAIVFATTDKSLKHKGIS 233 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+VP G ++K+G R+++T L N + N+ P KI Sbjct: 234 AFIVPM-----DAPGFSLGAKEDKLGIRASSTSNLIMDNV---RIPKDNLLGEPGMGFKI 285 Query: 315 LIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD + V+G + +A A + YA RH G + + ++ I+ + + + Sbjct: 286 AMQTLDGGRIGVAGQALGIASASIDCAVKYALERHAFGKPISELQSIQNKISAMTVARDS 345 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L++R A D + + EAA A++ A C +A++ +GG+GY+ + Sbjct: 346 ARLLTWRAAQLKDNGERFTREAAMAKLAASEAATMCSH-------QAIQILGGAGYVRDF 398 Query: 429 SIARHYRESPANSILLGSGNAMVLDVLN 456 RHYR++ I G+ L + N Sbjct: 399 PAERHYRDARITEIYEGTSEIQHLVIAN 426 >gi|111019727|ref|YP_702699.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110819257|gb|ABG94541.1| acyl CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 598 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 43/298 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 L+E + G+ +A IT++ DG Y ++G K ++S + ++LA+ G Sbjct: 164 LSEPQAGSSLADITTRAVPQDDGSYRVTGTKMWISGGDHELTENIVHLVLAKTPGGGPGV 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSN----------TF 295 + F+VP+ L G N + L +K+GNR L F + Sbjct: 224 KGISLFIVPKYLPGADGGLGERNDVTLVGLNHKMGNRGTTNTLLAFGDGTHTPAGDAGAV 283 Query: 296 GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------- 348 GFL+G+ + + M + ++++ V +++ YAR R + Sbjct: 284 GFLVGEEHRGLSYMFHMMNEARIGVGFVAIALGYVGYRKSLDYARVRTQGRPLGAKDPAA 343 Query: 349 ----LIDQPVMKRAIADIALDIAAATALSF---RLANSFD---EAKSRSEEAAYARIMAP 398 +ID ++R + + A L RL + D +A + + ++ P Sbjct: 344 PPVPIIDHADVRRMLLAQKSYVEGALVLGLYCSRLVDEQDTALDAATGDQATLLLDVLTP 403 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 I K W + + A++ GG GY + + ++YR++ N I G+ LD+L Sbjct: 404 IAKSWPSQWCLEANSLAIQVHGGYGYTRDYDVEQYYRDNRLNPIHEGTHGIQGLDLLG 461 >gi|326799056|ref|YP_004316875.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] gi|326549820|gb|ADZ78205.1| Butyryl-CoA dehydrogenase [Sphingobacterium sp. 21] Length = 382 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + + + D Y L+G K W + + ++++AQ +G + Sbjct: 125 LSEPEAGSDATSQKTIAEDKGD-YYLLNGTKNWITNGSNAAVYLVIAQTHPNLGHRGINA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 + + G +NK+G R + T L+FS+ FGF + G Sbjct: 184 FIVEKDSPGFTIGPKENKLGIRGSDTHSLQFSDVKIPKENRIGADGFGFTFAMKTLEGGR 243 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 I + + + ++ LA + YA+ R G + + ++ +AD+ I A Sbjct: 244 -------IGIAAQALGIASGAYELA--LKYAKERTTFGKPIAEHQAIQFKLADMYTQIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A D+ + +E AA A++ A T A + EA++ GG G+++E Sbjct: 295 ARLLCLKAAWLKDQHQPYAEAAAVAKLFASDT-------AMRITVEAVQIHGGYGFVKEY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 HVERLMRDAKITQIYEGT 365 >gi|323450396|gb|EGB06277.1| hypothetical protein AURANDRAFT_60198 [Aureococcus anophagefferens] Length = 428 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 27/272 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GL+E G+D A ++ + D + L+G K W ++ +DA ++ A + + + Sbjct: 147 FGLSEPGNGSDAGAASTTARDDGDA-WVLNGTKAWITNAHEADAAVVFATTDKSLKHRGI 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L D G ++K+G R ++T L + LLG+ + KI Sbjct: 206 SAFLVDTKAEGFSVGAAEDKLGIRGSSTANLIMEDCRIPKSCLLGERG------DGFKIA 259 Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++ + + + A YA R G L + ++ I+++A + AA Sbjct: 260 MRTLDGGRIGIAAQALGIGQAALDVAATYAADRTAFGKPLTNLYAIQLKISEMACKLEAA 319 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEER 428 L++R A+ D + +++AA A++ C A A +A++ +GG GY+ + Sbjct: 320 RLLTWRAASRKDAGLAYTKDAAMAKL--------CASEAATFAAHQAIQVLGGMGYVSDM 371 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 R YR++ I G+ V+ LN+L+ Sbjct: 372 PAERFYRDARITEIYEGTSEVQHVVIALNVLK 403 >gi|221134834|ref|ZP_03561137.1| Acyl-CoA dehydrogenase [Glaciecola sp. HTCC2999] Length = 598 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 121/296 (40%), Gaps = 34/296 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ + + + DG Y +SG K F+S+ D I+LA++ Sbjct: 164 LTEPHCGSDLGMLKCKAEPNEDGSYRISGTKIFISAGEHDMSENIVHIVLARLPDAPAGT 223 Query: 253 --VGCFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 + F+VP+ D G N + +++K+G + +AT + F G L+G N Sbjct: 224 KGISLFIVPKYHVDEQGNKGERNTVKCGSIEHKMGIKGSATCVMNFDEARGILIGAPNRG 283 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR----------RRHVSGGI--LIDQP 353 + + + + + +S S A+ YA+ +++ G +I P Sbjct: 284 LNCMFTFMNIARIGTGLEGLSASEASFQGALAYAQDRLQFRSMTGKKNADGPADPIIVHP 343 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDE------AKSRSEEAAYARIMAPITKYWCCKM 407 ++R + AL+ DE A ++ A ++ PI K + + Sbjct: 344 DVRRMLLTQKAFAEGNRALAIYCMQLVDETLYGTDADAKQLADAKLSMLTPIVKAFLTET 403 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 A + M+ GG GYI E + + R++ ++ G+ +D+L G+N Sbjct: 404 ALETTSHGMQVYGGHGYIAEWGMEQLARDTRICTMYEGTTGIQAIDLLARKIMGSN 459 >gi|84501855|ref|ZP_01000013.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gi|84389850|gb|EAQ02484.1| isovaleryl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 373 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 24/269 (8%) Query: 200 LGLTEKRGGTD-IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 LGLTE G+D + ++ + ++ D Y ++G K ++++ P++D ++ A+ + G Sbjct: 108 LGLTEPGAGSDALGSMATTARRDGDD-YVINGSKIYITNGPIADVILLYAKTDKSKGAKG 166 Query: 258 VPR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + ++E +P Q+L +K+G R + T EL F + ++G N V Sbjct: 167 ISAFIIETDNPGFKVAQKL-DKMGFRGSPTGELVFEDCRVPASAMVGQENTGVSVV---- 221 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD V+ + V +AE + YA+ R G + +M+ +A+I ++ Sbjct: 222 -MSGLDLERAMVASVCVGMAERALELGLEYAKIREQFGRPISSFQMMQSKLAEIYTEVET 280 Query: 369 ATALSFR-LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A A S+R LA K ++ A Y AV EA GGSGY+++ Sbjct: 281 ARAFSYRALAACTGLPKGAGGRGEIHKLTAAACLYAGEAFNKAV-TEACHIHGGSGYMQD 339 Query: 428 RSIARHYRESPANSIL-LGSGNAMVLDVL 455 I R YR AN +L +G+G + V ++ Sbjct: 340 TEINRLYR---ANKLLEIGAGTSEVRKII 365 >gi|134106811|ref|XP_777947.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260647|gb|EAL23300.1| hypothetical protein CNBA4160 [Cryptococcus neoformans var. neoformans B-3501A] Length = 416 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 23/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF- 256 L ++E G+D+ ++ + + +G + ++G K W ++P+S F++ A+ + V Sbjct: 152 LAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 211 Query: 257 -LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + L+E G G +K G R + T EL F N + + NV G V + ++ Sbjct: 212 GMTAFLVEKGW-KGFEVGEGLDKFGMRGSPTAELFFDNV---KIPEENV-LGKVGNGALV 266 Query: 316 IY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD + +SG M+ +L A+ Y R G + +M+ +AD+ ++A Sbjct: 267 LMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLMQGKLADMYTKLSA 326 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A + +A + D + A A + + A V EA +C+GG+GYI + Sbjct: 327 SRAYVYAVARACDAGMISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYINDY 379 Query: 429 SIARHYRESPANSILLGS 446 R R+S ++ G+ Sbjct: 380 PAGRLVRDSRLYTVGAGT 397 >gi|319951364|ref|ZP_08025189.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] gi|319434961|gb|EFV90256.1| acyl-CoA dehydrogenase domain-containing protein [Dietzia cinnamea P4] Length = 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 32/258 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVG--CFL 257 L+E + G+D AA+ + ++ D Y ++G K W ++D + + EG G C L Sbjct: 127 LSEPQAGSDAAALRCRAERDGDA-YVVTGTKSWITHGGIADVYNTFVRTGEGSRGISCLL 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 VPR E+ L + + ++K+G T + T G L+G E ++I Sbjct: 186 VPRDTEN-----LHFGKPEDKMGLNGVPTTTASYEGTRIDAGRLIGAEG------EGLRI 234 Query: 315 LIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 LDS + ++ + +A+ A+ YA R G +I + +AD+A +A+ Sbjct: 235 AFSALDSGRLGIAAVATGIAQRALDDAVAYANEREAFGKTIIGHQGLGFLLADMAAAVAS 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A A D + S EA+ A++ A A V +A++ +GG GY E Sbjct: 295 ARAAYLDAARRKDAGRPYSREASIAKLTA-------TDAAMKVTTDAVQVLGGVGYTREF 347 Query: 429 SIARHYRESPANSILLGS 446 + R+ RE+ I G+ Sbjct: 348 PVERYMREAKITQIFEGT 365 >gi|299689355|pdb|3NF4|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From Mycobacterium Thermoresistibile Bound To Flavin Adenine Dinucleotide gi|299689356|pdb|3NF4|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From Mycobacterium Thermoresistibile Bound To Flavin Adenine Dinucleotide Length = 387 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 25/279 (8%) Query: 178 IFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFL 235 +F E P + IG L+E + G+D AA+ +DG Y ++G K W Sbjct: 110 VFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATP-TDGGYVINGSKSWIT 168 Query: 236 SSPMSDAFIMLAQV-EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 +D + + A+ EG G CFLVP GL + + + K+G + T + Sbjct: 169 HGGKADFYTLFARTGEGSRGVSCFLVP-----ADQPGLSFGKPEEKMGLHAVPTTSAFYD 223 Query: 293 NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGG 347 N + D + LDS + ++ + LA EA+ YA R G Sbjct: 224 NAR--IDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 +ID + +AD+A +A A A A D+ + S++A+ A++ A Sbjct: 282 KIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTA-------TDA 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A V +A++ GG GY + + R+ RE+ I G+ Sbjct: 335 AMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEGT 373 >gi|207727717|ref|YP_002256111.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206590958|emb|CAQ56570.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 393 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ +G L ++E G+D+ ++ + ++ D Sbjct: 109 TPAQKAKYLPKLVSGEW--------------VGALAMSEPNAGSDVVSMKLRAERRGD-R 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P D ++ + E +G + + + G + +K+G R + Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338 T EL F N +LG+ N T + M L Y + A++S + M+ + Y Sbjct: 214 HTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + + +++ IAD+ + A A + + + D A R + A Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + Y + A + EA++ +GG+GYI E R +R++ I G+ Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376 >gi|116328517|ref|YP_798237.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121261|gb|ABJ79304.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 585 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 90/358 (25%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + K +EY P M V + LTE G+D+ + ++ K +G++ L+G K Sbjct: 163 FGSKEMVKEYVP----KMANGEVFGAMALTEPNYGSDLPNLQTKAVKDENGVWRLTGTKR 218 Query: 234 FLSSPMSDAFIMLAQVEGRVGC------FLVPRLLEDGSPN----GLCYQRLKN------ 277 F++ GC ++ L G+P GL + +K+ Sbjct: 219 FITH----------------GCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSSDVFIA 262 Query: 278 ----KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 K+G + T E+ + N+ G L+G E+ LI A+M+ G R+S+A Sbjct: 263 GIEKKMGLHCSPTCEVVYENSPGILIG---------EEGYGLIRYSMAMMN--GARLSIA 311 Query: 334 ------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 EA YA R G + + P ++R ++ + +IA A+ + S D Sbjct: 312 AQAMGIATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSID 371 Query: 382 EAKSRSEE--------------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +SE A + P++KY+ + A + + ++ GG Sbjct: 372 LYHWKSERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGG 431 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472 +G+ + I+R YR+ +I G+ ++ + + G + FE+ FS + Sbjct: 432 AGFTYDYDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKI 489 >gi|88856935|ref|ZP_01131586.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1] gi|88813811|gb|EAR23682.1| acyl-CoA dehydrogenase (acd-9) [marine actinobacterium PHSC20C1] Length = 381 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 47/299 (15%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T +H+ +P+ R P I + +TE G+D+ + S+ ++ + + Sbjct: 97 TAYLHRFGSPEQIDRWLRPALAGEF-----VIAMAVTEPDAGSDVRRMRSKARREGNE-W 150 Query: 227 CLSGHKWFLSS-PMSDAF---IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 ++G K F+++ P++D + LA R G F+V R G P C +R K+G Sbjct: 151 VITGRKTFITNGPLADGIAIVVRLADTTDRFGVFVVLR----GDPGYQC-ERTLGKMGCN 205 Query: 283 SNATVELEFSNTFGFLLGDLNVSTGP-----------VEDMKILIYLDSAIMSVSGM--- 328 S+ EL F + V GP +ED+ ++ +++ S + Sbjct: 206 SSEVGELVFDD----------VRVGPDRMLSPEGGSSLEDVLDVLVRGRVLVAASALGLA 255 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA-AATALSFRLANSFDEAKSRS 387 R + + YA++R G +P+ + +I++ A A+TA+ ++D A Sbjct: 256 RRAFDVGMEYAKQREAFG-----RPIGR--FQEISMKFADASTAIRAAHLITYDTAALLE 308 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ + K + + A V+ + M GG+G+++ I R YR++ +I+ G+ Sbjct: 309 RDSTVPVLECSQAKLFASETAVMVVDQMMRVFGGAGFMQSSVIERLYRDARFFTIVEGT 367 >gi|306820834|ref|ZP_07454458.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551152|gb|EFM39119.1| butyryl-CoA dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 379 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F+++ SD +I++A + G + Sbjct: 123 FGLTEPNAGTDASMQQTTAVKNGDH-YILNGSKIFITNGDESDTYIVMAMTDKSQGNRGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + K+G R +AT EL F + ++ N+ + + K+ + Sbjct: 182 SAFIVERGFKGFSTGPHEKKMGIRGSATCELIFEDC---IVPAENLLSQEGKGFKVAMQT 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A E I Y + R G L + +AD+A I AA L Sbjct: 239 LDGGRIGIAAQALGIAQGALDETIAYVQERKQFGRSLSKFQNTQFQLADLANMIEAARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ A D S AA+A++ A T A V + ++ GG GY + + R Sbjct: 299 VYKAAFCKDNGLPYSVPAAHAKLFAAET-------AMKVTTKCVQLFGGYGYTRDYPVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKITEIYEGT 365 >gi|300122626|emb|CBK23194.2| Isovaleryl-CoA dehydrogenase [Blastocystis hominis] Length = 438 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 112/238 (47%), Gaps = 37/238 (15%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-----PMSDAFIMLAQVEGRV 253 G+ +TE GGTD+ ++ + K D Y L+G K ++++ + DAF++ A+ +G++ Sbjct: 174 GVCMTEPDGGTDVMSMRTNAVKKGD-TYILNGRKMWITNGAINGELGDAFLVYAKTDGKL 232 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V + + S Q++KNK+G RS+ T EL F + ++ E+ K Sbjct: 233 SMFVVEKGMRGFSLG----QQIKNKLGMRSSGTAELVFEDV------EVPACNRIGEEGK 282 Query: 314 ILIYLDSAIMSVSGMRVSL-AEAIHYARR----RHVSGG--ILIDQPV-----MKRAIAD 361 + + + ++ RV+L A+++ A+R + GG + QP+ ++R IA+ Sbjct: 283 AALCM---MRNLEMERVTLAAQSVGIAKRCIEVMNAYGGERVAFGQPINRFGQIQRLIAE 339 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A + + +AN D K + R+ K +C M V A++ + Sbjct: 340 SYAGYQAGRSFLYNVANGLDLFKPGN------RMDTDAVKLFCGPMGKQVADNAIQVL 391 >gi|299533029|ref|ZP_07046416.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44] gi|298719253|gb|EFI60223.1| butyryl-coa dehydrogenase [Comamonas testosteroni S44] Length = 408 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 21/255 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-QVEGRVG----- 254 LTE G+D++ + + G + L+G K F++ + ++D F+++A Q +G G Sbjct: 132 LTEPGAGSDVSRLGAHYAPAPQGGWTLNGQKKFITRANVADMFVVVARQADGPGGGRGLS 191 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVED 311 F+VPR G+ + K+G + F + LLG +D Sbjct: 192 AFVVPR-----DTPGITVSPVIPKLGWYGVPIALVSFDDVHIAPEHLLGKEGEGMALAQD 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + + A +++ +L A YA +R V G + ++ +A++A I AA Sbjct: 247 TLLRARIGHAAIALGRAAGALQIAAQYANQRQVFGQPVGAHQGIQWMVAEMAAQIEAARC 306 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A +D A I A I K + ++ + ++ +GG+GY++ + Sbjct: 307 LVYSTAQRYDAGD------ADVAIHASIAKLHATDLCMRIVVDCLQLLGGNGYLKAFPLE 360 Query: 432 RHYRESPANSILLGS 446 R R++ N I G+ Sbjct: 361 RFLRDAKMNQIGEGT 375 >gi|104782429|ref|YP_608927.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95111416|emb|CAK16136.1| isovaleryl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 387 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 114/255 (44%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G +K+G R + T EL F N G L G + V ++ Sbjct: 187 TAFIVERDWKGFTRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRVLMSGLDY 246 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 ++++ A M+ + + Y R G + + +++ IAD+ + A+ A Sbjct: 247 ERVVL----AGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRA 302 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D A++ ++AA + + + A + EA++ +GG+GYI E Sbjct: 303 YLYAVAQACDRAETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYINEFPAG 355 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 356 RLLRDAKLYEIGAGT 370 >gi|330501899|ref|YP_004378768.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] gi|328916185|gb|AEB57016.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina NK-01] Length = 379 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGWLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 L + + G + K+G ++ T EL F + F +L+ +L Sbjct: 182 TSLFLVEANTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + I +++ +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------GIGALASAEAALKWTLDYTRERKAFGKAVADFQNTRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA + KYW + V+ E ++ GG G Sbjct: 291 TEIQVGRVFIDRCLELHLQGKLDVPTAA-------MLKYWTTDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E IAR + ++ I G+ M Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370 >gi|330797908|ref|XP_003286999.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum] gi|325083022|gb|EGC36486.1| hypothetical protein DICPUDRAFT_97570 [Dictyostelium purpureum] Length = 416 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 26/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFL 257 GLTE G+D A + ++ +K + G Y L+G K W +SP++D F++ A+ + + F+ Sbjct: 160 FGLTEPNAGSDPAGMQTRAKKNTAGNYVLNGTKTWITNSPIADVFVIWAKDDNNDIRGFV 219 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310 + + ++ GL +++ K+ R++ T VE+ S+ F D+ GP Sbjct: 220 LEKGMK-----GLSAPKIEGKLSLRASITGMIVMEDVEVPASHMF----PDIKGLRGPFS 270 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + Y S+ A Y R G L + ++ +AD+A +I+ Sbjct: 271 CLNKARY-GIGWGSLGAAEFCYTTARQYGLDRKQFGRPLAANQLYQKKLADMATEISLGL 329 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 +++ D K+ E + + K C + + ++ + +GG+G +E + Sbjct: 330 QACYQVGRLIDAGKATPERIS-------LIKRNSCGKSLDIARQSRDMLGGNGIADEYHV 382 Query: 431 ARH 433 RH Sbjct: 383 IRH 385 >gi|317404354|gb|EFV84778.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans C54] Length = 392 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/314 (20%), Positives = 130/314 (41%), Gaps = 29/314 (9%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + +R P KA P + +G L ++E Sbjct: 74 HMVAMEEISRASASIGLSYGAHSNLCVNQINRNGTPAQKAKYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D ++ A+ + + L + Sbjct: 134 GAGSDVVSMKLRADKKGD-RYVLNGSKMWITNGPDADTLVVYAKTDPEAHQRGITAFLVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G + +K+G R + T EL F N G + G + V ++ Sbjct: 193 KGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNGGVKV---------LMSG 243 Query: 318 LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG V + +A+ Y R G + + +++ +AD+ + A+ A Sbjct: 244 LDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTLQASRAF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +++ + D + +E R + + A + E ++ +GG+GYI E + R Sbjct: 304 CYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYPVGR 361 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 362 LWRDAKLYEIGAGT 375 >gi|195588795|ref|XP_002084143.1| GD12977 [Drosophila simulans] gi|194196152|gb|EDX09728.1| GD12977 [Drosophila simulans] Length = 420 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 53/299 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278 L+G K W + +D I+ A+ G + F+V E G + +K Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327 +G R ++T EL F DL V + E+ + + + A V Sbjct: 240 MGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 M+ + A YA +R ++ + +++ +AD+ +++A + + +A S D A +RS Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTNLSACRSYLYTVARSCD-AGNRS 350 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ + + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403 >gi|116331245|ref|YP_800963.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124934|gb|ABJ76205.1| Acyl-CoA dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 585 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 90/358 (25%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 + K +EY P M V + LTE G+D+ + ++ K +G++ L+G K Sbjct: 163 FGSKEMVKEYVP----KMANGEVFGAMALTEPNYGSDLPNLQTKAVKDENGVWRLTGTKR 218 Query: 234 FLSSPMSDAFIMLAQVEGRVGC------FLVPRLLEDGSPN----GLCYQRLKN------ 277 F++ GC ++ L G+P GL + +K+ Sbjct: 219 FITH----------------GCGFGDIPAVILTLARTGTPTSGARGLSFFLVKSSDVFIA 262 Query: 278 ----KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA 333 K+G + T E+ + N+ G L+G E+ LI A+M+ G R+S+A Sbjct: 263 GIEKKMGLHCSPTCEVVYENSPGILIG---------EEGYGLIRYSMAMMN--GARLSIA 311 Query: 334 ------------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381 EA YA R G + + P ++R ++ + +IA A+ + S D Sbjct: 312 AQAMGIATAAYMEAKKYASEREQFGKTIQNIPAVRRMLSCMDREIAGMRAVLLEASRSID 371 Query: 382 EAKSRSEE--------------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +SE A + P++KY+ + A + + ++ GG Sbjct: 372 LYHWKSERMKEKGIDERDIKKDETIRKWEKLANLFTPLSKYYITEAANKIAYDGLQIHGG 431 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTN-------LFEQLFSTL 472 +G+ + I+R YR+ +I G+ ++ + + G + FE+ FS + Sbjct: 432 AGFTYDYDISRIYRDVRITNIYEGTTQLQIVAAIGGIVSGMSAKGHLRQYFEEEFSKI 489 >gi|109899026|ref|YP_662281.1| acyl-CoA dehydrogenase-like [Pseudoalteromonas atlantica T6c] gi|109701307|gb|ABG41227.1| acyl-CoA dehydrogenase-like protein [Pseudoalteromonas atlantica T6c] Length = 391 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 30/256 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-----VEGR 252 G+ LTE GTD+ AI + K D Y ++G K W +S ++ +L + V Sbjct: 122 GVALTEPNAGTDLQAIRTTAVKDGDD-YIINGAKTWITNSLNGNSLAVLVKTDLDAVPAH 180 Query: 253 VGC--FLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVS- 305 G F+V E+G G+ ++K K+G RS T E+ F N L+G+ S Sbjct: 181 TGTSMFIVETKDENGEFKAGITVSKMK-KLGYRSIDTCEVVFENVRVPAANLVGEKEGSG 239 Query: 306 ----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 G +E +I + A ++ R + A+ YA+ R G + ++ + + Sbjct: 240 FKHAIGGLELGRINVAARGAGIA----RGATELAVRYAQERETFGKAICQHQAIQLKLGE 295 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L + A +D + EA A+ +C EAM GG Sbjct: 296 MATQVEAARLLIEQAAAKYDANERCDMEAGMAKYFGSEAGVFCAN-------EAMRIFGG 348 Query: 422 SGYIEERSIARHYRES 437 Y E I R+YR++ Sbjct: 349 YSYSVEYDIERYYRDA 364 >gi|254389567|ref|ZP_05004793.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294816838|ref|ZP_06775480.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus ATCC 27064] gi|326445820|ref|ZP_08220554.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197703280|gb|EDY49092.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294321653|gb|EFG03788.1| Acyl-CoA dehydrogenase domain protein [Streptomyces clavuligerus ATCC 27064] Length = 395 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 26/267 (9%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV 249 M V G +TE G+D A+ + + + G Y L+G K F+S +P++D ++ A Sbjct: 116 MCAGDVIAGHAMTEPGSGSDAFAMATTVTR-TGGTYVLNGSKVFVSNAPIADVLLVFAVD 174 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLG----DL 302 + G V L D GL R +K+G R++ E+ LLG + Sbjct: 175 PAKRGFAGVSAFLVDRDTPGLTVSRPVSKMGLRTSPMGEVHLDGCEVAADALLGPEGAGM 234 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 V +E + I L SA+ + MR L + +AR R G + + I D+ Sbjct: 235 AVFNWTMERERSFI-LASALGT---MRRDLERCVDHARTRGQFGRPIGSFQAVSHRIVDM 290 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI--- 419 + + AA L RLA D + EAA A++ ++ A + ++ + Sbjct: 291 RMRLDAARLLLHRLAWQIDNDRPTKVEAALAKVF----------VSEAFVQSGLDAVQIH 340 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY E + R R++ A+ I G+ Sbjct: 341 GGYGYTTEYELERDLRDALASRIYSGT 367 >gi|195443644|ref|XP_002069509.1| GK11564 [Drosophila willistoni] gi|194165594|gb|EDW80495.1| GK11564 [Drosophila willistoni] Length = 384 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 30/259 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISD--GIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D A ++ K++D Y L+G K W +S + ++ A ++ + + Sbjct: 124 LSEPGNGSDAGAASTTA-KLNDETQTYLLNGTKAWISNSKEASGGLVFATIDKTLRHKGI 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK----- 313 L GL + +NK+G R+++T +L +L D+ V + M Sbjct: 183 TAFLTHKDVYGLSVSKKENKMGMRASSTCQL--------VLEDVQVPQNQILSMPGNGFR 234 Query: 314 -ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + LD + ++ +A+A + Y+++R G L ++++ +AD+AL + Sbjct: 235 IAMESLDCGRIGIAAQATGIAQAALELAVDYSQKRLAFGKQLSKMQMIQQKLADMALRVE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + L++R A D ++EA+ A++ A +C + ++ +GG GY+ + Sbjct: 295 TSRLLTWRAAWLKDNGLPITKEASMAKLHASEAATYCAH-------QCIQVLGGMGYVTD 347 Query: 428 RSIARHYRESPANSILLGS 446 +YR + I G+ Sbjct: 348 MPAELYYRNARVTEIYEGT 366 >gi|237836953|ref|XP_002367774.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49] gi|211965438|gb|EEB00634.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii ME49] gi|221505076|gb|EEE30730.1| isovaleryl-CoA dehydrogenase, putative [Toxoplasma gondii VEG] Length = 409 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 31/288 (10%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA------- 247 A+G L ++E G+D+ + SQ + DG Y L G K W + ++D I+ A Sbjct: 128 AVGALAMSEPEAGSDVMGMRSQATRNEDGSYTLRGSKSWITNGTLADVIIVYAKETTEEI 187 Query: 248 -QVEGRVGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV 304 +V + G + ++E+G +GL + +K+G R + T L F + + N+ Sbjct: 188 QEVPAKAGSSRSVTAVIVENGM-DGLTRGKKLDKLGMRCSETCALYFDD---IRIPPQNI 243 Query: 305 STGPVEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 + KIL+ LDS + ++ M L + Y R G + + +M+ Sbjct: 244 LGTTGDGAKILMSGLDSERLVLAAGPLGIMAACLDVVLPYINHRQQFGQPVANFQLMQGK 303 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ A + +A S+ E + + A + + C + A V + ++ Sbjct: 304 LADVYSAFITHRAFLYSVARSYSEGSAGRADCASSILC-------CAEKATQVALDTIQM 356 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFE 466 +GG+GY E R R+S I G+G + + +L E T E Sbjct: 357 LGGNGYTNEYPAGRLLRDSKLYEI--GAGTSEIRRMLIARELNTRFRE 402 >gi|297199867|ref|ZP_06917264.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] gi|197710332|gb|EDY54366.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sviceus ATCC 29083] Length = 386 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + L T ++W P++ S E + GLTE GG+D A + + Sbjct: 98 IHLFGTEEQKREWLPRLCSGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144 Query: 222 SD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271 D + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 145 PDTDEWVINGTKCFITNSGTDITGLVTVTAVTGRKPDGKPLISAIIVP----SGTP-GFT 199 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +K+G ++ T EL FS+ LLG+ + L LD ++++ + Sbjct: 200 VAAPYSKVGWNASDTRELSFSDVRVPAANLLGEQGRGYA-----QFLRILDEGRIAIAAL 254 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 LA E++ YA+ R G + ++ IAD +++ A TA RLA + +A Sbjct: 255 GTGLAQGCVDESVKYAKEREAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDA 307 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 SR + A + K + +A EA + GG G++ E +AR +R+S + Sbjct: 308 ASRLVLGEPFKKEAALAKLYSSTIAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILE 365 Query: 444 LGSGNAMVLDVLNLLEKG 461 +G G + V +L E G Sbjct: 366 IGEGTSEVQRMLIARELG 383 >gi|218781176|ref|YP_002432494.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762560|gb|ACL05026.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 601 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 34/291 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR-- 252 + LTE G+ ++ + + + +G Y + G K F+S+ + +MLA+++G Sbjct: 162 MALTEPGAGSSLSDLETSAEPTEEGYYLIRGQKIFISAGDHNCVDNVVHLMLAKIKGGPP 221 Query: 253 ----VGCFLVPRL---LEDG-SPNGLCYQRLKNKIGNRSNATVELEFS---NTFGFLLGD 301 + F+VP+ L G PN + + +K+G R +L N G+L+G+ Sbjct: 222 GVKGISLFVVPKFRPALGGGLEPNDVVASGVYHKMGYRGAPIAQLSMGDGDNCRGWLVGE 281 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-----------LI 350 + + M L + + + + A+ Y R R I +I Sbjct: 282 PHKGLFYMFQMMNEARLGVGLGATAIASAAYYAALEYCRERRQGRKIGQKDPTQPQVPII 341 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD--EAKSRSEEAAYA---RIMAPITKYWCC 405 + ++RA+ I + +L + D + E+ Y+ ++ P+ K + Sbjct: 342 EHADIRRALLFQKAIIEGSHSLLLQGCKYADMMRVTTGEEQERYSLLLDLLTPVAKTYPS 401 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 +M +++ ++C GGSGY ++ + ++YR+ + I G+ LD+L Sbjct: 402 EMGIQAVSQGLQCFGGSGYCDDYPLEQYYRDMRIHPIHEGTTAIHGLDILG 452 >gi|83311698|ref|YP_421962.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82946539|dbj|BAE51403.1| Acyl-CoA dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 383 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 50/261 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A++ + +K D Y ++G K F++ +P + F ++A+ + G Sbjct: 122 FALTEPNAGSDAASLRTTARKDGDH-YIVNGTKRFITNAPEASIFTLMARTDPNNKGAGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305 + F+V E SP GL ++ K+G + T ++ F +N G + G Sbjct: 181 ISAFIV----EADSP-GLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGIEGQ---- 231 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 G MK+L D + +S V ++E ++ YA R G + + +++ +A Sbjct: 232 -GFKTAMKVL---DRGRLHISATCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM----APAVIAE-A 415 D + AA + A D+ + S EAA CCKM A IA+ A Sbjct: 288 DSRTEAYAARCMVLDAARKKDQGINVSTEAA------------CCKMFASEAVGRIADRA 335 Query: 416 MECIGGSGYIEERSIARHYRE 436 ++ GG+GYI + I R YR+ Sbjct: 336 VQVHGGAGYISDYGIERFYRD 356 >gi|328543478|ref|YP_004303587.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum SL003B-26A1] gi|326413222|gb|ADZ70285.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum SL003B-26A1] Length = 387 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 39/283 (13%) Query: 185 PTNKAPMQKTSVA---IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240 P +A + +T G LTE G+D+A I +Q + + G + LSG K ++S+ ++ Sbjct: 105 PEQRAWLARTRTGRAISGFALTEPGSGSDVANIATQARPRTGGGWVLSGDKTYISNGGIA 164 Query: 241 DAFIMLAQVEGRVGC-----FLVP---------RLLEDGSPNGLCYQRLKNKIGNRSNAT 286 D +++ A+ G FL+P +E +P+ L + R + + S+ Sbjct: 165 DVYVVFARTGEAPGARGLSAFLLPADAPGLAVVERIEVIAPHPLAHLRFDDIV--LSDGA 222 Query: 287 VELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG 346 + F + L+V V ++ R +L EA+ R + G Sbjct: 223 LIGRHGEGFRIAMSVLDVFRATV-----------GAAALGFARRALDEALARVESRRLFG 271 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCC 405 L D +++ IAD+AL + A+ L +R A + D R S EAA A++ A Sbjct: 272 APLSDLQMVQGHIADMALAVDASALLVYRAAWTKDMGAERVSREAAMAKLHA-------T 324 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A VI A++ GG G + ++ YRE A I G+ + Sbjct: 325 EAAQTVIDTALQLHGGDGVRKGFAVESLYREIRALRIYEGASD 367 >gi|302673154|ref|XP_003026264.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8] gi|300099945|gb|EFI91361.1| hypothetical protein SCHCODRAFT_71327 [Schizophyllum commune H4-8] Length = 418 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 29/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D ++ ++ +K D Y ++G K W +S ++ F++ A + G C Sbjct: 162 LSEPAAGSDAFSLQTRAKKEGDH-YIINGSKMWITNSYEAEVFLIFANTDPSKGYKGITC 220 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F + + G+ + + K+G R+++T L F + + N+ G + KI Sbjct: 221 FAATKDM------GIQIAKKEEKLGIRASSTCTLNFDD---LKVPAANIIGGEGQGYKIA 271 Query: 316 I-YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + ++ V LA+ A+ Y R G + M+ +A+ A++I AA Sbjct: 272 IEILNEGRIGIAAQMVGLAQGAFDKAVPYTFERKQFGKPVGTFQGMQFQMAEAAVEIEAA 331 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++ A D+ +++AA A KY +A V A+E GG G+ E Sbjct: 332 RLLTYNAARRKDQGLPFTKQAAMA-------KYHSSVVAQRVAGSAIEWAGGVGFTRETG 384 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEK 460 I +++R+S +I G+ N + + ++K Sbjct: 385 IEKYWRDSKIGAIYEGTSNIQLQTIAKFIQK 415 >gi|229829340|ref|ZP_04455409.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM 14600] gi|229792503|gb|EEP28617.1| hypothetical protein GCWU000342_01427 [Shuttleworthia satelles DSM 14600] Length = 384 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 29/272 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ K LTE GTD ++ ++ DG + L+G K F+++ +D +I++A Sbjct: 113 PLAKGEKLGAFALTEPGAGTDAQGAQTKAVEVEDG-WVLNGSKCFITNGKEADIYIIIAV 171 Query: 249 VE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + GR ++E G+P G + + K+G R +AT EL F + LL Sbjct: 172 TDTVEDKRGRSKKLFSAFIVEKGTP-GFTFGTKEKKMGIRGSATYELIFQDCKIPKENLL 230 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354 G G E M L D + ++ + L E + + R G + Sbjct: 231 G--RRGKGFQEAMHTL---DGGRIGIAAQALGLGEGAIDRTVAFVMERKQFGRPIGAFQN 285 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+ + AA L +R A + E S EAA A++ A + A V + Sbjct: 286 TQFQLADMKTRMDAAKYLVYRAACAKAEKSRFSAEAAEAKLFA-------AEAAMDVTTK 338 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG GY E + R R++ I G+ Sbjct: 339 AVQLHGGYGYTREYEVERMMRDAKITEIYEGT 370 >gi|149186178|ref|ZP_01864492.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp. SD-21] gi|148830209|gb|EDL48646.1| putative glutaryl-CoA dehydrogenase protein [Erythrobacter sp. SD-21] Length = 391 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 25/243 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A + + +K+ DG Y L+G K W +SP +D F++ A+ E G + Sbjct: 134 FGLTEPDAGSDPAGMKTTAKKV-DGGYVLNGSKTWISNSPFADVFVVWAKSE-EHGGGIR 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNAT---VELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 +LE G GL +++ KI R++ T V E LL ++ GP Sbjct: 192 GFVLEKGM-KGLSAPKIEGKISLRASTTGMIVMDEVEVDEDALLPEVQGLKGP------F 244 Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE +H AR+ R G L + + + +AD+ +I+ Sbjct: 245 GCLNRARYGISWGALGAAEFCMHAARQYGLDRQQFGVPLASKQLYQLKLADMMTEISLGL 304 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ DE + ++ M I K A + +A + GG+G EE + Sbjct: 305 QGSLRVGRLMDEGR-------FSPDMISIVKRNNVGKALDIARKARDMHGGNGISEEYQV 357 Query: 431 ARH 433 RH Sbjct: 358 IRH 360 >gi|108743508|dbj|BAE95610.1| putative acyl-CoA dehydrogenase [Streptomyces kanamyceticus] Length = 401 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 35/275 (12%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+G K D Y L+G K +L++ + + + EG + Sbjct: 135 GSDVSAITSKGVKDGDD-YVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313 L + P GL +K+G + T EL G + V G + Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGATGRGFYQ 250 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ ++ ++V+ +A+ + YA++RH G + ++ +A++A + A Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEMATKVEA 310 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A+ A D + EA A KY + V+ +A GG G+ +E Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 I R YRE+P +L+G G A + ++ LLE+ Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|302561781|ref|ZP_07314123.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] gi|302479399|gb|EFL42492.1| acyl-CoA dehydrogenase [Streptomyces griseoflavus Tu4000] Length = 390 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 25/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV--EGRVG--CFL 257 L+E G+D A++ ++ + D W ++D + ++A+ EG G FL Sbjct: 133 LSEPSSGSDAASLRTRAVRDGDDWVITGTKAWITHGGIADFYTVMARTGEEGPRGISAFL 192 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LI 316 VP G GL + K+G + + T ++ G + D + I L Sbjct: 193 VP-----GDAEGLGAAVPEKKMGMKGSPTAQVHLD---GVRVPDARRIGEEGQGFAIALS 244 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD + ++ + LA EA+ YA R G + D ++ +AD+A I A A Sbjct: 245 ALDGGRLGIAACAIGLAQAALDEALGYATERRQFGKPIADFQGLRFMLADMATQIEAGRA 304 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L A D + +++AA A K C A V +A++ +GG GY + Sbjct: 305 LYLAAARLRDAGRPFAKQAAMA-------KLHCTDTAMRVTTDAVQVLGGYGYTADFPAE 357 Query: 432 RHYRESPANSILLGS 446 R RE+ I+ G+ Sbjct: 358 RLMREAKVLQIVEGT 372 >gi|210075529|ref|XP_501919.2| YALI0C16797p [Yarrowia lipolytica] gi|199425292|emb|CAG82239.2| YALI0C16797p [Yarrowia lipolytica] Length = 530 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 25/273 (9%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAFIMLAQVEGR 252 S I L +TE G+D+A IT+ +K DG Y ++G KW + +D F + + G Sbjct: 249 SKRICLCITEPDAGSDVANITTTAEKTPDGKFYIVNGIKKWITNGIWADYFTVAVRTGGP 308 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT------VELEFSNTFGFLLGDLNVS 305 G + LL + GL +R+ + S +T V++ N G V Sbjct: 309 GSGMNGISVLLLERGMEGLETRRMNTQGMLSSGSTWVTMEDVKVPVENLLGKENKGFKVI 368 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 ++ I + + S RV EA YA +R G LI+ PV++ +A++A+ Sbjct: 369 MTNFNHERVGIIIQANRAS----RVCYEEACKYAHKRKTFGKPLIEHPVIRAKLANMAIR 424 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA----EAMECIGG 421 I + A L N + + EE A R+ I C A + EA + GG Sbjct: 425 IESTHAW---LENLVFQCQMFPEEEAMLRLGGAIAG--CKAQATQTLELCAREASQIFGG 479 Query: 422 SGYIE---ERSIARHYRESPANSILLGSGNAMV 451 Y + R YRE A +I GS M+ Sbjct: 480 LSYTRGGLGGKVERLYREVRAYAIPGGSEEIML 512 >gi|300705368|ref|YP_003746971.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CFBP2957] gi|299073032|emb|CBJ44389.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CFBP2957] Length = 393 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ +G L ++E G+D+ ++ + ++ D Sbjct: 109 TPAQKAKYLPKLVSGEW--------------VGALAMSEPNAGSDVVSMKLRAERRGDH- 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P D ++ + E +G + + + G + +K+G R + Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338 T EL F N +LG+ N T + M L Y + A++S + M+ + Y Sbjct: 214 HTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + + +++ IAD+ + A A + + + D A R + A Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + Y + A + EA++ +GG+GYI E R +R++ I G+ Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376 >gi|257463115|ref|ZP_05627516.1| Acyl-CoA dehydrogenase [Fusobacterium sp. D12] gi|317060711|ref|ZP_07925196.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12] gi|313686387|gb|EFS23222.1| acyl-CoA dehydrogenase [Fusobacterium sp. D12] Length = 381 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 37/291 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD------IAAITSQGQKISDGIY 226 W F E P + IG GLTE GTD IA Q+ + Sbjct: 96 WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTDASGQQTIAVFDEATQE-----W 150 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F+++ + +++ A + G + ++E G+P G + + K+G R + Sbjct: 151 VINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEAGTP-GFSIGKKEKKLGIRGS 209 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335 AT EL F + LLGDL + KI ++ LD + ++ + LA EA Sbjct: 210 ATCELIFEDVRLPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 263 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y + R G L +A++ + + AA L ++ A + +AA A++ Sbjct: 264 VQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWKESNHLPYTVDAARAKL 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A T A V +A++ GG GY E + R R++ I G+ Sbjct: 324 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|254429503|ref|ZP_05043210.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] gi|196195672|gb|EDX90631.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Alcanivorax sp. DG881] Length = 383 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 29/271 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGR----VGCF 256 LTE G+D A++++ +K D Y L+G K F+S +D +++A+ G + CF Sbjct: 124 LTEPGAGSDAASLSTTAKKDGDD-YVLNGAKAFISGAGDTDMLVLMARTGGSGAGGISCF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309 VP G+ Y R + K+G +S T + + L+G+ ++ + Sbjct: 183 AVP-----ADTPGISYGRNEMKMGWKSQPTRAVILEDARIPADCLIGEEGQGFRIAMAGL 237 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + +I I A S+ + +L +A Y + R G + D ++ +AD+A ++ AA Sbjct: 238 DGGRINI----ASCSLGAAQAALHQAQQYVQERKQFGQAIGDFQTVQFTLADMATELVAA 293 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + A D+ S ++ + K + V +A++ GG GYI E Sbjct: 294 QQMVRLAAWKLDQNHSDKS------MLCAMAKRLATDLCFNVCNQALQLHGGYGYISEYP 347 Query: 430 IARHYRESPANSILLGSGNAM-VLDVLNLLE 459 + R+ R++ + IL G+ M V+ N+L+ Sbjct: 348 LERYVRDARVHQILEGTNEIMRVIIARNVLK 378 >gi|71990804|ref|NP_491886.2| Acyl CoA DeHydrogenase family member (acdh-4) [Caenorhabditis elegans] gi|31249876|gb|AAB52476.3| Acyl coa dehydrogenase protein 4, confirmed by transcript evidence [Caenorhabditis elegans] Length = 319 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P TS L+E G+D A+ + +K D Y ++G K W +S S+ F++ A Sbjct: 82 PKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDD-YVINGSKMWISNSEQSETFLVFAN 140 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G CF+V E G+ G + ++K+G RS++T L F N +LG Sbjct: 141 ADPSKGYKGITCFIV----EKGT-KGFTIGKHEDKLGVRSSSTCPLHFDNVRVHKSAILG 195 Query: 301 DLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPV 354 + + K I YL++ + + + LA+ I Y ++R G +ID Sbjct: 196 EFG------KGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRIIDFQG 249 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 M+ IA + +I AA L + A EAA A++ A Sbjct: 250 MQHQIAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFA 292 >gi|291239181|ref|XP_002739489.1| PREDICTED: acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain-like [Saccoglossus kowalevskii] Length = 428 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 33/261 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GR 252 +TE G+D+A I ++ +K D Y ++G K W + ++ + +LA+ + G Sbjct: 164 VTEPGAGSDVAGIRTRAEKKGDH-YVINGQKMWITNGGKANWYFVLARTDPDLKRPASGA 222 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGD---LNVS 305 F+V R +P R + +G R + T + F + LLGD ++ Sbjct: 223 FTGFIVDRDTPGVTPG-----RKELNMGQRCSDTRGITFEDVVVPKENVLLGDGAGFKIA 277 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 G + + + A +V + +L EA YA R G ++ + +A++A+ Sbjct: 278 MGAFDKTRPPV----AAGAVGLAQRALDEATKYALERKTMGKVIAQHQAVAFILAEMAIG 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A +++ D+ + A I K W +A +A++ GG+GY Sbjct: 334 IETARLATYKCCWEHDQGHRNT-------YYASIAKAWAADVANKCATDAVQIFGGNGYN 386 Query: 426 EERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 387 SEYPVEKLMRDAKIFQIYEGT 407 >gi|262378977|ref|ZP_06072134.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] gi|262300262|gb|EEY88174.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter radioresistens SH164] Length = 390 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 40/293 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + + PK+ S EY +G L ++E G+D+ ++T + + D Sbjct: 108 TEAQKQRYLPKLVSGEY--------------VGALAMSEPNAGSDVVSMTLRADQKGD-R 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + +D ++ A+ + + G + L + G + + +K+G R Sbjct: 153 YVLNGSKMWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDMKGFSHGQHLDKLGMRG- 211 Query: 285 ATVELEFSNTFGFLLGDL-----NVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA--- 335 SNT+ D NV G +K+L+ LD +SG + + +A Sbjct: 212 -------SNTYPLFFDDCEVPAENVLGGVGNGVKVLMSGLDYERAVLSGGPLGIMDACLD 264 Query: 336 --IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + Y R G L + +M+ IAD+ A AL + + + D R++ Sbjct: 265 IVMPYLHERKQFGQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD----RADHGRAL 320 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 R A + + A + EA++ +GG+GYI + + R +R++ I G+ Sbjct: 321 RKDAASAILYSAEKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGAGT 373 >gi|258655394|ref|YP_003204550.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258558619|gb|ACV81561.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM 44233] Length = 621 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 76/361 (21%), Positives = 147/361 (40%), Gaps = 62/361 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEG----- 251 LTE G+D+ A ++ + DG + L G K F++S D ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQPDGTWHLEGVKRFITSAEQDLTENIVHLVLARPEGPGIES 223 Query: 252 RVGC-----FLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEF----SNTFG 296 R G F+VP+ L D G NG+ +++K+G + + T EL F S G Sbjct: 224 RPGTKGLSLFIVPKFLFDPATGELGERNGVFVTGVEHKMGLKVSTTCELSFGLNGSPAVG 283 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGI------ 348 +LLG+ + G + +++ Y + +++ + A+ YA+ R S + Sbjct: 284 YLLGERH--DGIAQMFQVIEYARMMVGTKAIATLSTGYLNALDYAKTRVQSADLTRAADK 341 Query: 349 ------LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR-------I 395 +I P ++R + A+ A+ D + Sbjct: 342 TAPRVTIIHHPDVRRILMRQKAYAEGLRAVYLYTASWQDRIAGGELGGGELAMAKHVNDL 401 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + PI K + A +A +++ GGSGY ++ I ++ R++ +++ G+ D Sbjct: 402 LLPIVKGVGSERAYENLALSLQVFGGSGYTQDYPIEQYIRDAKIDTLYEGTTAIQAQDF- 460 Query: 456 NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSAA 515 F ++ LG ++ T ++ S+ ++ + E++AL +A Sbjct: 461 --------FFRKIVKDGGAALGVIATEIATFVKTSMPETRDGR-----FKEELALLGTAL 507 Query: 516 A 516 A Sbjct: 508 A 508 >gi|29833084|ref|NP_827718.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] gi|29610206|dbj|BAC74253.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] Length = 391 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 16/259 (6%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P + IG GLTE G+D A++ + ++ S G + L+G K W + Sbjct: 113 FGSEEQKQEWLPRMASGDVIGCFGLTEPDHGSDPASMRTYAKRESGGDWVLNGRKMWITN 172 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 ++ ++ AQ + + F+VP G +K+K R++ T EL + Sbjct: 173 GSVAGVAVVWAQSDDGIRGFVVPT-----DAPGFSAPEIKHKWSLRASVTSELVLDDVRL 227 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 L TG + L + I+ ++ R S A+ YA+ R G + + Sbjct: 228 PAAAVLPEVTGLKGPLSCLSHARYGIVWGAMGAARASFEAAVEYAKTREQFGRPIGGFQL 287 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 + +AD+A+++ L+ L D + R E+ ++ ++ C+ A + Sbjct: 288 TQAKLADMAVELHKGILLAHHLGRRMDAGRLRPEQVSFGKLNNVREAIEICRTARTI--- 344 Query: 415 AMECIGGSGYIEERSIARH 433 +G +G E + RH Sbjct: 345 ----LGANGISLEYPVMRH 359 >gi|73539846|ref|YP_294366.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] gi|72117259|gb|AAZ59522.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal [Ralstonia eutropha JMP134] Length = 376 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQ 248 P+ + + LTE G+D +A+ + + D Y L+G K F++S +D I+LA Sbjct: 111 PLARGEMLGAFCLTEPHVGSDASALRTTAVRDGDH-YVLNGVKQFITSGKNADVAIVLAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G FLVP + G RL++K+G S+ T ++ + +LG Sbjct: 170 TDKAAGKRGISAFLVPT-----NTPGYIVARLEDKLGQHSSDTAQIVLEDCRVPAANMLG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 D ++ +E +I I A S+ R + A+ YA+ R G L ++ Sbjct: 225 DEGAGYKMALSGLEGGRIGI----ASQSIGMARAAFDAALAYAKERESFGQPLFQHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A I A + + A+ D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLADMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLFA-------SEMAEKVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|325277409|ref|ZP_08143027.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51] gi|324097453|gb|EGB95681.1| isovaleryl-CoA dehydrogenase [Pseudomonas sp. TJI-51] Length = 387 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + G +K+G R + T EL F N +LG LN +++L Sbjct: 187 TAFIVERDWPGFSRSNKFDKLGMRGSNTCELFFDNVEVPEENMLGQLNGG------VRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + +SG M+ + + Y R G + + +++ IAD+ + A+ Sbjct: 241 MSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNAS 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D ++ ++AA + + + A + EA++ +GG+GYI E Sbjct: 301 RAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYINEFP 353 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 354 AGRLLRDAKLYEIGAGT 370 >gi|300693543|ref|YP_003749516.1| butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07] gi|299075580|emb|CBJ34873.1| putative Butyryl-CoA dehydrogenase [Ralstonia solanacearum PSI07] Length = 377 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 29/270 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFI 244 P T AIG LTE + G++ + ++ DG + L+G K F+++ ++ F Sbjct: 112 PDLATGRAIGAFCLTEPQAGSEANNLRTRAVP-RDGHWVLNGSKQFVTNGARARLAIVFA 170 Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + G+ G F+VP G R ++K+G R++ T + + + Sbjct: 171 VTDPGAGKRGISAFIVPT-----DTPGFQVGRPEHKLGIRASDTCPITLDDC---AVPQA 222 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMK 356 N+ P E +KI L L+ + ++ V +A A HYA R G L + + Sbjct: 223 NLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARHYANERIQFGKALREHQTIA 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L A K EA+ A K + ++A + ++A+ Sbjct: 283 NMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYASELAEEICSKAI 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GY+ + ++ RHYR++ I G+ Sbjct: 336 QIHGGYGYLADYAVERHYRDARITQIYEGT 365 >gi|315442919|ref|YP_004075798.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315261222|gb|ADT97963.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length = 382 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ +T++ + D + ++G K +++S + +++ A G G + Sbjct: 124 LAITEPGGGSDVGHLTTRAVRDGD-CFIVNGAKTYITSGVRADYVVTAARTGGPGAAGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 ++ D G R +K+G RS+ T EL ++ D+ V V + +L Sbjct: 183 LIVVDKGTPGFAVSRKLDKMGWRSSDTAELSYT--------DVRVPAANVVGAENTGFLQ 234 Query: 320 SAIMSVSGMRVSLAEAIH------------YARRRHVSGGILIDQPVMKRAIADIALDIA 367 A VS RV LA + + R R G LI + ++ +A++A I Sbjct: 235 IAAAFVS-ERVGLAAQAYSSAQRCLDLTAEWCRNRQTFGKPLIARQTVQSTLAEMARRID 293 Query: 368 AATA-----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + +LA D E +A+ A W V +A++ GG Sbjct: 294 VARVYTRHVVERQLAGDADLIT----EVCFAKNTAVEAGEW-------VANQAVQLFGGM 342 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GY+ E + R YR+ + +G G +L L Sbjct: 343 GYMTESEVERQYRD--MRILGIGGGTTEILTSL 373 >gi|228015642|gb|ACP50614.1| glutaryl-CoA dehydrogenase [Desulfococcus multivorans] Length = 389 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K + PK+ S E+ G G+TE G+D+ A++S + D + L+ Sbjct: 109 LKKKYVPKLSSAEF-------------LGGFGITEPDAGSDVMAMSSTAEDKGDH-WLLN 154 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 G K W ++ +D I A + G L ++E + G+ L+ K+G+ ++ T Sbjct: 155 GSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSHASPTG 213 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341 EL N + N+ P + +I+ L+ +S + V LA+A I Y Sbjct: 214 ELFLDNV---KVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNE 270 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + D + + IA +A+++ AA L+++ A + DE + + + + K Sbjct: 271 RRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNN------GLDVAMAK 324 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 Y + AM +G GY E +AR YR++P ++ GS N Sbjct: 325 YAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSAN 371 >gi|120611835|ref|YP_971513.1| acyl-CoA dehydrogenase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120590299|gb|ABM33739.1| acyl-CoA dehydrogenase domain protein [Acidovorax citrulli AAC00-1] Length = 389 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 20/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA+ + DG Y L G K W + ++D +++ A+ G + Sbjct: 125 FALSEPEAGSDVAAMGCTARAEGDG-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G I A + + G + P E K+ + Sbjct: 184 SAFIVDADAPGFSVAGRIEVIAPHPLARLRFD-----GCRVPAAQRLGAPGEGFKVAMRT 238 Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD SV+ R ++ EA+ A R + GG+L D + + +A +A I +A L Sbjct: 239 LDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQAKLAQMATAIDSAALL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D + EAA A++ A + A VI A++ GG G + + + R Sbjct: 299 TYRAAWLRDRGAVVTREAAMAKMTA-------TENAQQVIDAAVQLFGGLGVVSGQPVER 351 Query: 433 HYRESPANSILLGS 446 YRE A I G+ Sbjct: 352 LYREIRALRIYEGA 365 >gi|119387813|ref|YP_918847.1| acyl-CoA dehydrogenase domain-containing protein [Paracoccus denitrificans PD1222] gi|119378388|gb|ABL73151.1| acyl-CoA dehydrogenase domain protein [Paracoccus denitrificans PD1222] Length = 378 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%) Query: 193 KTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE 250 +T AI LTE G+D+A+ + ++ G + L+G K ++S+ ++D +++ A+ Sbjct: 115 RTGRAISAFALTEPGAGSDVASTATLAERTPGG-WRLTGEKTYISNGGIADIYVIFARTG 173 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G + L GL I A ++L+ G +L D + P E Sbjct: 174 EAPGARGLSAFLMPADCAGLSVAERIEVIAPHPLARLKLD-----GVVLPDAALIGRPGE 228 Query: 311 DMKIL-----IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 KI ++ + + GM R +L EA+ R GG L D +++ +AD+A+ Sbjct: 229 GFKIAMSVLDVFRPTVGAAALGMARRALDEALARVHRPRAGGGALADHQIVQGHLADMAV 288 Query: 365 DIAAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA L +R A + D R + EAA A K + + A VI A++ GG G Sbjct: 289 RVDAAALLVYRAAWTKDMGAPRVTREAAMA-------KLYATEAAQEVIDAALQLHGGDG 341 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 ++ YR+ A I G+ + Sbjct: 342 VRHGTAVEALYRDIRALRIYEGASD 366 >gi|308048711|ref|YP_003912277.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799] gi|307630901|gb|ADN75203.1| isovaleryl-CoA dehydrogenase [Ferrimonas balearica DSM 9799] Length = 387 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + Sbjct: 128 LAMSEPGAGSDVVSMKLTARKQGD-KYILNGNKMWITNGPDAHTYVIYAKTDPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + N+ G +K+L+ Sbjct: 187 TAFIVERDFPGFSQAQKLDKLGMRGSNTCELVFEDC---EVPAENILGGEGNGVKVLMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M ++ + Y +R G + + +++ +AD+ AA + Sbjct: 244 LDYERVVLSGGPLGIMAAAMDAVMDYVGQREQFGQAIGNFQLVQGKMADMYTRANAARSY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA A + + ++A + +A++ +GG+GYI E R Sbjct: 304 VYTVAAACDRGETTRKDAAGAIL-------YSAELATQISLDAIQLLGGNGYINEYPTGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|281203495|gb|EFA77695.1| putative acyl-CoA oxidase [Polysphondylium pallidum PN500] Length = 421 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 27/268 (10%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPM 239 ++Y A M+K GLTE G+D A + + ++ SDG + L+G K W ++P Sbjct: 143 KQYYLPKMASMEKIGA---FGLTEPNAGSDAAGLFCEAKQNSDGTWTLNGEKRWIGNAPF 199 Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 +D I+ A+ L+ + + + G+ + + NKI R + N +L Sbjct: 200 ADVVIIWAR---NTDTKLINGFVIEKNTPGMTVETINNKIALRMVQNGHIYLKNC---IL 253 Query: 300 GDLN-------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARRRHVSGGILID 351 D N +GP + + + + S I G+ S E+ I Y + R G L Sbjct: 254 SDENRLPLAKDFGSGPGKSLFLTRIVASWI--ALGIACSAYESCIKYVKERKQFGQSLAK 311 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAV 411 +++ + + I + + ++ R+++ FD+ K Y ++ + K V Sbjct: 312 YQLVQERLVKMLGIIQSMSLMTLRISHLFDQNK-----LTYGQV--GLLKAHNTSHGRQV 364 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPA 439 ++ A E +GG+G + + +AR + + A Sbjct: 365 VSMARELLGGNGIVTDFGVARSFVDMEA 392 >gi|256421270|ref|YP_003121923.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] gi|256036178|gb|ACU59722.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] Length = 392 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 19/239 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ-VEGRVGCFLV 258 GLTE G+D ++ + + D + W ++P + ++ A+ EG++ +V Sbjct: 136 FGLTEPDFGSDPGSMITHFKDAGDHVILNGAKMWISNAPFAQIAVVWAKDEEGKIRGLIV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 R +E G K K R++AT EL F N +L D GP+ + Sbjct: 196 ERGME-----GFSTPETKGKWSLRASATGELVFDNVKVPKENILPDAKGLKGPLSCLSSA 250 Query: 316 IYLDSAIMSVSGMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 Y V+G + + A+ YA+ R G + + ++ +A++ +I A +++ Sbjct: 251 RY--GIAWGVTGAAMDCYDIALRYAKERIQFGKPIAGFQLTQKKLAEMVTEITKAQLMNW 308 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 RL +E K+ + + + A+ A C++A + +A + +GG G E I RH Sbjct: 309 RLGVLKNEGKATAAQISMAKRNA-------CEIATRIARDARQILGGMGITGEYPIMRH 360 >gi|257388948|ref|YP_003178721.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] gi|257171255|gb|ACV49014.1| acyl-CoA dehydrogenase domain protein [Halomicrobium mukohataei DSM 12286] Length = 389 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 40/280 (14%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI--------YCLSGHK-WFLSSPMS 240 P+ + L+E G+D+ A+ + + + Y + G K W + ++ Sbjct: 113 PLAEGEEIGAFALSEAGAGSDVPAMETTAKPVGGDPHEGEEPDEYVVDGGKLWISNGSVA 172 Query: 241 DAFIMLAQVEGRVG----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 D ++ A+ + G V R ED +G + ++K+G++ T EL F + Sbjct: 173 DTVVLFAKTDPEAGNKGISSFVVRPEED---DGFHVEGTEHKLGDKGCPTAELRFDDMH- 228 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILID 351 L D + + L L+ ++++ V +A EA+ YA R D Sbjct: 229 -LPADRRLGEAGRGFVHALKTLNGGRITIAARGVGIAQAALDEALDYAGERE-----QFD 282 Query: 352 QPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 QP+ ++ +AD+ AA L + A+ ++ +EAA A++ + + Sbjct: 283 QPIGDFQAIQHKLADMDTKTEAARMLMHKAADKKIRGENFVKEAAQAKL-------YASE 335 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ V E ++ GG GY ++ + R YR++ N I G+ Sbjct: 336 VSREVANEGIQIHGGYGYTKDFPVERFYRDAKLNEIYEGT 375 >gi|58259503|ref|XP_567164.1| Isovaleryl-CoA dehydrogenase 2 mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|57223301|gb|AAW41345.1| Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 417 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 23/258 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF- 256 L ++E G+D+ ++ + + +G + ++G K W ++P+S F++ A+ + V Sbjct: 153 LAMSEPNAGSDVVSMRTSATRSDEGEGWIMNGSKCWITNAPVSSTFLIYAKSDTNVAPSK 212 Query: 257 -LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + L+E G G +K G R + T EL F N + + NV G V + ++ Sbjct: 213 GMTAFLVEKGW-KGFEVGEGLDKFGMRGSPTAELFFDNV---KIPEENV-LGKVGNGALV 267 Query: 316 IY--LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + LD + +SG M+ +L A+ Y R G + +M+ +AD+ ++A Sbjct: 268 LMSGLDLERLVLSGGPLGIMQAALDMALEYTHERKQFGKQIGTFQLMQGKLADMYTKLSA 327 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A + +A + D + A A + + A V EA +C+GG+GYI + Sbjct: 328 SRAYVYAVARACDAGMISRRDCAGAIL-------YSSDRAVEVAIEAQQCLGGNGYINDY 380 Query: 429 SIARHYRESPANSILLGS 446 R R+S ++ G+ Sbjct: 381 PAGRLVRDSRLYTVGAGT 398 >gi|299068196|emb|CBJ39415.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum CMR15] Length = 393 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ IG L ++E G+D+ ++ + ++ D Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAERRGD-R 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P D ++ + E +G + + + G + +K+G R + Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338 T EL F N +LG+ N T + M L Y + A++S + M+ + Y Sbjct: 214 HTGELVFDNVEVPAENILGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + + +++ IAD+ + A A + + + D A R + A Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + Y + A + EA++ +GG+GYI E R +R++ I G+ Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376 >gi|296283477|ref|ZP_06861475.1| acyl-CoA dehydrogenase, long-chain specific [Citromicrobium bathyomarinum JL354] Length = 403 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 20/262 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGC 255 + +TE G+D+ I ++ DG Y LSG K F+++ ++ I++A+ G G Sbjct: 145 IAMTEPGAGSDLQGIRTRAVADGDG-YRLSGQKTFITNGQQANLIIVVAKTNPDAGSKGI 203 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 L ++E G + +KIG T EL F N + L+G G + M Sbjct: 204 SLF--VVETDDAEGFSRGKNLDKIGTEMGDTSELFFDNVYLPADNLIGG-EEGQGLYQLM 260 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 K L L A S++ + +LAE I Y +R G ++ + +A+ + A Sbjct: 261 KELPKERLIIACESLAIIEAALAETIAYVSQRKAFGKSILQFQNTEFKLAECKTE--AVI 318 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A +F DE R + + A + KYW + A ++ + GG GY+ E I Sbjct: 319 ARTF-----IDECIVRLIDGRLSAEYASMAKYWVSEAAQRIVDTCQQMFGGYGYMSEYPI 373 Query: 431 ARHYRESPANSILLGSGNAMVL 452 A+ Y++ I G+ M L Sbjct: 374 AQMYKDVRVKRIYGGTTEIMKL 395 >gi|296808389|ref|XP_002844533.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480] gi|238844016|gb|EEQ33678.1| acyl-CoA dehydrogenase [Arthroderma otae CBS 113480] Length = 435 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 33/299 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 V K W P++ T L+E G+D A+ ++ +K S G Y L+ Sbjct: 158 VKKKWLPRL--------------ATDTVGSFCLSEPISGSDAFALQTKAEKTSSG-YKLN 202 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 G K W +S + FI+ A ++ G + + + G + + K+G R+++T Sbjct: 203 GSKMWITNSMEAGFFIVFANLDPSKGYKGITAFIVEKDMPGFNIAKKEKKLGIRASSTCV 262 Query: 289 LEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA------EAIHYARR 341 L F + + N+ + K I L+ + ++ LA A + Sbjct: 263 LNFDDV---EVPKENILGEEGQGYKYAISLLNEGRIGIAAQMTGLALGAWENAAGYIWND 319 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G ++ M+ +A +IAAA AL F A + + ++AA A++ Sbjct: 320 RKQFGQLIGTFQGMQHQVAQSYTEIAAARALVFNAARKKEAGQDFVQDAAMAKL------ 373 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + L+K Sbjct: 374 -YASQVAGRVSGLAVEWMGGMGFVREGIAEKMFRDSKIGAIYEGTSNIQLQTIAKTLQK 431 >gi|115360512|ref|YP_777649.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD] gi|115285840|gb|ABI91315.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD] Length = 1292 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 19/271 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255 +TE G+ + AI S+ Q+ G + ++G+K W SS + + F A G VG Sbjct: 754 FAITEPAAGSHVRAIASRAQRTESGDWLVTGNKRWSGSSAWAGIINVFARQADGTGMVGL 813 Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313 + P G+P + + L + ++ L+ + + + LGD+ + Sbjct: 814 AVRP-----GTPGVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMLVAQHAM 868 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A + V GM+ A+ +H Y RR V G+L+D P+ + + ++ I AL Sbjct: 869 NIARLGIAAVCVGGMK-RCAQLMHRYGARRQVGTGLLLDNPLSRLRLGELRDRIDGLDAL 927 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 LA D + E+ I+K ++ E M+ +GG GYIE + Sbjct: 928 VEHLAAELDLGVAVPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAPQ 981 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTN 463 +R++ I G +++ + + L G++ Sbjct: 982 IFRDARLTRIFEGPTETLLVHLGSRLLNGSD 1012 >gi|255318756|ref|ZP_05359982.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82] gi|255304012|gb|EET83203.1| isovaleryl-CoA dehydrogenase [Acinetobacter radioresistens SK82] Length = 390 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 30/281 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S EY +G L ++E G+D+ ++T + + D Y L+G K Sbjct: 115 YLPKLVSGEY--------------VGALAMSEPNAGSDVVSMTLRADQKGD-HYVLNGSK 159 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + +D ++ A+ + + G + L + G + + +K+G R + T L F Sbjct: 160 MWITNGGDADVLVVYAKTDLQAGAKGMTAFLIEKDMKGFSHGQHLDKLGMRGSNTYPLFF 219 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVS 345 + + NV G +K+L+ LD +SG + + +A + Y R Sbjct: 220 DDC---KVPAENVLGGVGNGVKVLMSGLDYERAVLSGGPLGIMDACLDIVMPYLHERKQF 276 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G L + +M+ IAD+ A AL + + + D R++ R A + Sbjct: 277 GQALGEFQLMQGKIADMYSTWLACKALVYSVGQACD----RADHGRALRKDAASAILYSA 332 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A + EA++ +GG+GYI + + R +R++ I G+ Sbjct: 333 EKATWMAGEAIQTLGGNGYINDFATGRLWRDAKLYEIGAGT 373 >gi|254482196|ref|ZP_05095437.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214037521|gb|EEB78187.1| Acyl-CoA dehydrogenase, C-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 393 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 20/250 (8%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ + + DG Y +SG K W +SP +D F++ A Sbjct: 127 PKLATGEWIGCFGLTEPDHGSDPGSMVTRARSV-DGGYSVSGAKMWITNSPFADVFVVWA 185 Query: 248 QV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLN 303 + + ++ F +LE G +GL +++ K+ R++ T E+ F LL ++ Sbjct: 186 KTDDDKIRGF----ILEKGM-DGLSAPKIEGKLALRASVTGEIVMDEVFVPEENLLPNVE 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 GP + Y A S+ A Y R G L + +++ +AD+ Sbjct: 241 GLKGPFGCLNNARY-GIAWGSLGAAETCWHAARQYTMERKQFGVPLASKQLVQLKLADMQ 299 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I+ A R D E + + K C + A+ A + +GG+G Sbjct: 300 TEISLALQGCLRAGQLMDAGDIAPE-------LISLIKRNSCGKSLAIARTARDMLGGNG 352 Query: 424 YIEERSIARH 433 +E I RH Sbjct: 353 ISDEYPIMRH 362 >gi|170062288|ref|XP_001866603.1| acyl-coa dehydrogenase [Culex quinquefasciatus] gi|167880245|gb|EDS43628.1| acyl-coa dehydrogenase [Culex quinquefasciatus] Length = 629 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 86/386 (22%), Positives = 158/386 (40%), Gaps = 63/386 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE------- 250 LTE G+D +I + K +DG Y L+G K W + ++D F + AQ E Sbjct: 189 FALTEPSSGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIADIFTVFAQTEVVDAKTG 248 Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG 300 +V F+V R G NG +NK+G + + T E+ F N G Sbjct: 249 QKRDKVTAFIVERGF-GGVSNG----PPENKMGIKCSNTAEVYFEDCKIPAENVLGQEGD 303 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 V+ + + + + SA +S + MR + +A +A R G L ++ +A Sbjct: 304 GFKVAMNILNNGRFGM---SATLSGT-MRACIQKAAEHATNRVQFGRKLETYGGIQEKLA 359 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 +A+ A ++++ ++ + D EAA +++ A + ++ C EA++ + Sbjct: 360 RMAMHHYATQSMAYMISGNMDSGSVDYHLEAAISKVFASESAWYVCD-------EAIQIL 412 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-----------LNLLEKGTN----- 463 GG G++++ + R R+ I G+ + + L V L L+K Sbjct: 413 GGMGFMKDTGLERVMRDLRIFRIFEGTNDILRLFVALTGIQYAGGHLKELQKAFKNPAAN 472 Query: 464 ---LFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIALASSA--AALY 518 +F++ + G G + + D + K AR +E I L A + L Sbjct: 473 LGLIFKEGSRRAARSFGMGGTDLTPFVADQL------KDAARQCSESIDLFGQAVESLLI 526 Query: 519 RAGMNDIADVFLENRFLDNCHSTHCM 544 + G + + ++ NR D T+ M Sbjct: 527 KHGKGIVEEQYMLNRLADAAIDTYAM 552 >gi|186473917|ref|YP_001861259.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184196249|gb|ACC74213.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 377 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ I ++ + DG + ++G K F++ + ++ F + G+ G Sbjct: 125 LTEPHAGSEANNIRTRA-VLRDGQWVINGSKQFVTNGSRASIAIVFAVTDPEAGKRGLSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G R ++K+G R++ T + + + + N+ P E ++I Sbjct: 184 FIVP----TDTP-GFNVGRPESKLGIRASDTCPISLDDC---AVPEANLLGAPGEGLRIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L+ + ++ + +A A YA R G L + + +AD+A + AA Sbjct: 236 LSNLEGGRIGIAAQAIGIARAAFDAARVYANERIQFGKALKEHQTIANMLADMATRLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A + EA+ A K + +MA V ++A++ GG GY+E+ + Sbjct: 296 RLLVHHAARLRSAGRPCLSEASQA-------KLYASEMAEEVCSKAIQIHGGYGYLEDYA 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|254254574|ref|ZP_04947891.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158] gi|124899219|gb|EAY71062.1| hypothetical protein BDAG_03879 [Burkholderia dolosa AUO158] Length = 393 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 17/256 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDPEAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310 + + G + +K+G R + T EL F N G L G + V +G Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLNGGVKVLMSGLDY 247 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + IM+ L + Y R G + + +++ +AD+ A Sbjct: 248 ERAVLAGGPTGIMAAC-----LDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACR 302 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + + D A S E R + + A + EA++ +GG+GYI E + Sbjct: 303 AYLYAVGRHLDSAGS--EHVRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPV 360 Query: 431 ARHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 361 GRLWRDAKLYEIGAGT 376 >gi|222106869|ref|YP_002547660.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4] gi|221738048|gb|ACM38944.1| glutaryl-CoA dehydrogenase [Agrobacterium vitis S4] Length = 391 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 23/281 (8%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 SM+++ ++ +H +A + E P + IG GLTE G+D + ++ Sbjct: 95 SMMSVQSSLVIHPIFA---YGSEEQKDKYLPGLVSGELIGCFGLTEPDAGSDPGGMKTRA 151 Query: 219 QKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 +KI G Y L G K W ++P++D F++ A+ E G + +LE G GL ++ Sbjct: 152 EKIEGG-YRLRGSKMWISNAPIADVFVVWAKSEAHDGA-IRGFVLEKGM-KGLSAPKIGG 208 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334 K+ R++ T E+ G +G+ + G L+ A +S + AE Sbjct: 209 KLSLRASITGEIVMD---GVEVGEDALLPGVSGLKGPFGCLNRARYGISWGVMGAAEDCW 265 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 + Y RH G L + ++ +AD+ +IA S R+ DE K E Sbjct: 266 VRSRQYGLDRHQFGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHKHAPE---- 321 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 M + K C A + A + GG+G E + RH Sbjct: 322 ---MISLIKRNNCGKALDIARMARDMHGGNGIQIEYHVMRH 359 >gi|254467375|ref|ZP_05080786.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] gi|206688283|gb|EDZ48765.1| acyl-CoA dehydrogenase [Rhodobacterales bacterium Y4I] Length = 382 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 44/316 (13%) Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 GH + + + ++A T + + W PK+ + E + L +TE G Sbjct: 89 GHGIHSGIVAHYILAYGTEEQKQR-WLPKMVTGE-------------LVGALAMTEPSTG 134 Query: 209 TDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFIMLAQ----VEGRVGCFLVPRLLE 263 +D+ AI ++ + DG Y LSG K F+++ I++A G G LV +E Sbjct: 135 SDVQAIKTKA--VKDGNAYRLSGQKTFITNGQHANLILVAAKTDPAAGAKGVSLVA--VE 190 Query: 264 DGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILI 316 G R +KIG + T EL FS N G G G + M+ L Sbjct: 191 TDGAAGFSRGRNLDKIGCHAADTSELFFSDVEIPPENILGGAEGQ-----GFYQMMQQLP 245 Query: 317 Y--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A +V M ++ + Y + R GG ++ + +A+ A A Sbjct: 246 QERLIIACGAVGAMEGAVERTVAYCKEREAFGGPILQFQNTRFKLAECLTKTKVARAF-- 303 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 DE + E + A + KYW V+ E ++ GG GY++E ++ + Sbjct: 304 -----LDECIAEHLEGRLSVEKAAMAKYWITDTQGEVLDECLQLHGGYGYMQEYAVGEMW 358 Query: 435 RESPANSILLGSGNAM 450 ++ I G+ M Sbjct: 359 ADARVQRIYGGTNEIM 374 >gi|332285966|ref|YP_004417877.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] gi|330429919|gb|AEC21253.1| acyl-CoA dehydrogenase [Pusillimonas sp. T7-7] Length = 396 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 23/278 (8%) Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 K+F +E P + LTE G+DI + ++ + D + + G K F++ Sbjct: 108 KLFGQESLRQRYLPAFAQGLLSSYALTEASHGSDIRTLDTKAHRKGDE-WVIQGEKHFIT 166 Query: 237 SPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNK--IGNRSNATVELEFSN 293 S + + FI+LA+ E V F VPR + GL +N G R+ + ++ N Sbjct: 167 SATAAELFIILAETEVGVSVFAVPRDIA-----GLSMYEGQNSATFGLRNGPHMNVKLDN 221 Query: 294 T---FGFLLGDLNVSTGPVEDMKILIYLDS--AIMSVSGMRVSLAEAIHYARRRHVSGGI 348 ++G G + + +L Y + +S+ R + A+ +AR R Sbjct: 222 VRLPLDHMIG--QEGKGVRQAVTVLNYSRTMAGAISLGVARAAFEGALAFARDRKAFDQR 279 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMA 408 ++D ++ AD+ +I AA L +R A + D S + A++ A C +A Sbjct: 280 VLDFQGIQWYFADMLTEIDAARLLIYRAAAALDSNDQISRWGSEAKLKA-------CAIA 332 Query: 409 PAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V ++A + G G + R+ R++ A I GS Sbjct: 333 TQVASQAAQICGAYGIMVNAPFGRYLRDAKAYEIAGGS 370 >gi|296139562|ref|YP_003646805.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296027696|gb|ADG78466.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 385 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 33/277 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQ 248 M + +TE G+D+A + + + +DG Y L+G K F++ + +D I+ A+ Sbjct: 115 MASGETMFAIAMTEPGTGSDLAGMKTTAKLSADGSHYVLNGAKTFITGGVNADRVIVCAR 174 Query: 249 V------EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + R G L + D + G R +KIG R++ T EL F++ LL Sbjct: 175 TAPATEDDRRFGISL---FVVDTTLAGYEVGRKLDKIGLRTSDTAELSFTDVAVPAADLL 231 Query: 300 GDLNVSTG------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G+ N G P E + I + S + V A+A Y + R + G + Sbjct: 232 GEENKGFGYLGQNLPQERLSIAV----GAYSQASAAVRFAQA--YTQDRTIFGKSVA--- 282 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 + + ++AA A + +S D + A K +C + A VI Sbjct: 283 ----SFQNTKFELAACKAKVDAMESSVDRGLELHDAGELTAADAASLKLFCTEAASDVID 338 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GYI E IAR Y ++ N I G+ M Sbjct: 339 RCLQLHGGYGYINEYPIARLYADNRVNRIYGGTSEVM 375 >gi|183984001|ref|YP_001852292.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] gi|183177327|gb|ACC42437.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] Length = 397 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 26/265 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML--------AQVEGRV 253 ++E G+D+AAI ++ + +DG Y + G K +L++ S + + AQ + Sbjct: 129 MSEPELGSDVAAIRTRATRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGAAQPHRNL 188 Query: 254 GCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 FLV + G GL +K+G + T EL F + + D+ T Sbjct: 189 TAFLVEKPTGFGEVLPGLTIPGKIDKLGYKGIDTTELIF-DGYRATADDILGGTPGQGFF 247 Query: 313 KILIYLDSAIMSVS------GMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +++ ++ ++VS G+R + A+ YA++RH G + + + +A++A + Sbjct: 248 QMMDGIEVGRVNVSARACGVGLR-AFELAVRYAQQRHTFGKPIAEHQAISFQLAEMATKV 306 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D + + A + KY + V ++ GG GY + Sbjct: 307 EAAHLMMVHAARLKDSGERND-------VAAGMAKYLASEYCSEVTQQSFRIHGGYGYSK 359 Query: 427 ERSIARHYRESPANSILLGSGNAMV 451 E I R R++P +L+G G + + Sbjct: 360 EYEIERLMRDAPF--LLIGEGTSEI 382 >gi|41407011|ref|NP_959847.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395362|gb|AAS03230.1| FadE13 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 382 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 16/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K +++S + +++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTSAVRDGDH-YIVNGAKTYITSGVRADYVVTAVRTGGPGAAGVS 182 Query: 260 RLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L+ E G+P G R +K+G RS+ T EL +++ L+G N + + Sbjct: 183 LLVVEKGTP-GFEVTRKLDKMGWRSSDTAELSYTDVRVPVSNLVGAENTGFAQIAQAFVS 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ +A++A I A S Sbjct: 242 ERIGLAAQAYSSAQRCLDLTVQWCRDRETFGRPLISRQSVQNTLAEMARRIDVARVYSRN 301 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + ++ + +A+ A W V +A++ GG GY+ E + R Y Sbjct: 302 VVERQLAGETNLIPQVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQY 354 Query: 435 RESPANSILLGSGNAMVLDVLN 456 R+ + +G G +L L+ Sbjct: 355 RD--MRILGIGGGTTEILIALS 374 >gi|58581140|ref|YP_200156.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623065|ref|YP_450437.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425734|gb|AAW74771.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367005|dbj|BAE68163.1| glutaryl-CoA dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 391 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 17/248 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GL+E +GG+D AA+T++ + DG + L+G K W + ++ I+ A Sbjct: 126 PEMATGRVIGCFGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWA 184 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + V FLV + G + +K+ R++ T L N F L + G Sbjct: 185 HTDDGVRGFLV-----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAG 239 Query: 308 PVEDMKILIYLDSAI-MSVSGMRVS-LAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + L I V G V+ L EA+ YA R + G L + +AD+A Sbjct: 240 LKAPLSCLNQARYGIAWGVIGAAVACLREALTYAGERILFGRPLAATQSAQIKLADMARG 299 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I+ A L+ +L + R E+ + A K+ C+MA V E + +G +G Sbjct: 300 ISTAQLLALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDVARECRDLLGAAGIT 352 Query: 426 EERSIARH 433 E RH Sbjct: 353 TEHVAIRH 360 >gi|33591834|ref|NP_879478.1| acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|33571477|emb|CAE44966.1| probable acyl-CoA dehydrogenase [Bordetella pertussis Tohama I] gi|332381251|gb|AEE66098.1| acyl-CoA dehydrogenase [Bordetella pertussis CS] Length = 386 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 40/274 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 +G +E G+D++ I + ++ D Y ++G K W + D +L G Sbjct: 123 IGASEASAGSDVSQIKTWARRDGDD-YVINGSKMWITNGVQGDWICLLCNTSQEGGPHKN 181 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG---PV 309 +VP G+ R +K+ R++ T EL F D+ V Sbjct: 182 KSLIIVPL-----DTPGVSVSRKLDKLVLRASDTAELFFD--------DVRVPVSNRIGA 228 Query: 310 EDMKILIYLDS-----AIMSVSGMRV---SLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E+M + ++ ++ GMR + E I YA +R V GG ++ V+ +A Sbjct: 229 ENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQ 288 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + +I A +L +R + + + ++ +A + KY +++ + E ++ GG Sbjct: 289 MQTEIEALRSLLYRAIGQYLDGQDITQ-------LASMAKYCAGRLSMRIPNECLQFWGG 341 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G + E I+R YR+ +I G N ++L+V+ Sbjct: 342 QGVMNENWISRAYRDLRQTAI-GGGANEIMLEVI 374 >gi|325283450|ref|YP_004255991.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] gi|324315259|gb|ADY26374.1| Butyryl-CoA dehydrogenase [Deinococcus proteolyticus MRP] Length = 411 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 38/281 (13%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGR--- 252 GLTE G+D A + + ++ DG + L+G K F++ + +++LA+ EG+ Sbjct: 146 GLTEPGSGSDSAGLQTNAKEQPDGSWILNGSKNFITQGSVGGTYVILARTDPPREGKGKN 205 Query: 253 --VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTG 307 + F+ R G R ++K+G RS+ T +L F + LLG+ + Sbjct: 206 DGISAFVFNR----DEVQGFSIGRKEDKLGLRSSDTAQLIFEDIHLPAEALLGERGNAFK 261 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEA-IHYARR----RHVSGGILIDQPVMKRAIADI 362 V M++L D + + M + L A YA R R G L + +A++ Sbjct: 262 DV--MRVL---DGGRVGIGAMGLGLGRAAFEYAARYTLEREQFGKPLAYNQNIAFRLAEM 316 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L + A+ D + + A A+ A + C EA++ +GG Sbjct: 317 DTKLEAARLLIRKAADLKDAGQPFTIPVARAKYYATVVGVEACD-------EAIQMLGGY 369 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVL----DVLNLLE 459 GYI+E + R +R++ I G+ L DVL E Sbjct: 370 GYIKEYPVERFWRDNRLTRIGEGTDEVQRLVISRDVLKRFE 410 >gi|294651523|ref|ZP_06728833.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292822587|gb|EFF81480.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 387 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 18/260 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVE-GRVGCFL 257 L +TE GG+D+AA+ ++ + D Y +SG K F++S + +D + + + + + G Sbjct: 127 LAITEPGGGSDVAALQTKAIREGD-YYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEG 185 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + LL D G+ LK K+G ++ T L F LLG N + + Sbjct: 186 ISMLLIDAHSEGITKTPLK-KMGWWASDTAHLHFDQVRVPASNLLGKENSGFKVIMNNFN 244 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL-- 372 + +++ V EA+ +A++R G L+D V++ + D+A + AL Sbjct: 245 MERFFLGVVAYGYALVCYEEALDWAQQRKTFGKRLVDHQVVRHKLVDMATQLTTTRALLE 304 Query: 373 --SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++++ + + + + +A T +C A++ +GG G++ Sbjct: 305 ETAWKMTQPQLQGADLVAQISMLKNVATRTMQFCADA-------AVQTLGGMGFMRGTKS 357 Query: 431 ARHYRESPANSILLGSGNAM 450 R YRE N I G+ M Sbjct: 358 ERIYREVKVNMIGGGAEEIM 377 >gi|187926160|ref|YP_001892505.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|241665648|ref|YP_002984007.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] gi|187727914|gb|ACD29078.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12J] gi|240867675|gb|ACS65335.1| acyl-CoA dehydrogenase domain protein [Ralstonia pickettii 12D] Length = 377 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F E P T AIG LTE G++ + ++ + DG + L+G+K F+++ Sbjct: 101 FGTEAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRA-VLRDGKWVLTGNKQFVTN 159 Query: 238 -PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 +D I+ A + G F+VP +P G R ++K+G R++ T + Sbjct: 160 GARADIAIVFAVTDPEAGKRGISAFIVP----TDTP-GFHVGRPEHKLGIRASDTCPITL 214 Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 N G L ++ +E +I I A +V R + A +YA R Sbjct: 215 EDCAVPEENLLGERGEGLKIALSNLEGGRIGI----AAQAVGIARAAFDAARNYANERIQ 270 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G L + + +AD+A + AA L A K EA+ A K + Sbjct: 271 FGKALREHQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYA 323 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++A + + A++ GG GY+ + ++ RHYR++ I G+ Sbjct: 324 SELAEEICSNAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365 >gi|116254738|ref|YP_770574.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115259386|emb|CAK10521.1| putative isovaleryl-CoA dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 381 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W ++P +D ++ A+ + G + Sbjct: 124 LAMSEVGAGSDVVSMRLRAEKKGD-RYILNGTKFWITNAPHADVLVVYAKTDPAAGPKGI 182 Query: 259 PR-LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 ++E G P G + +K+G R + T EL F + L+G E +KI Sbjct: 183 SAFIIEKGLP-GFSVSKKLSKLGMRGSDTAELVFEDCEVPAEALMGREG------EGVKI 235 Query: 315 LIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ LD ++G M+ L + Y R R G + D +M+ IAD+ + + + Sbjct: 236 LMSGLDYERAVLAGGPLGIMQACLDVVLPYVRDRKQFGKAIGDFQLMQGKIADMYVALNS 295 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A + +A + D ++ +AA A + A + A V EA++ +GG+GY +E Sbjct: 296 ARAYVYSVARACDAGRATRTDAAAAILFA-------SENAVKVSLEAIQALGGAGYTKEW 348 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 349 PVERFLRDAKLYDIGAGT 366 >gi|104781960|ref|YP_608458.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48] gi|95110947|emb|CAK15665.1| acyl-CoA dehydrogenase [Pseudomonas entomophila L48] Length = 383 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 48/314 (15%) Query: 149 GHLMS--PSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEK 205 G LMS SV ++A TP + W P++ + E IG LTE Sbjct: 85 GALMSIHNSVGCGPLLAY-GTPEQQQAWLPRLATGE--------------VIGCFCLTEP 129 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQVEGRVG-----CFLVP 259 + G++ + ++ + + DG + ++G K F+S+ I+ A + +G FLVP Sbjct: 130 QAGSEAHNLRTRAELV-DGQWVINGAKQFVSNARRAKLAIVFAVTDPELGKKGLSAFLVP 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDM 312 +P G R ++K+G R++ T + N LLG+ L ++ +E Sbjct: 189 ----TDNP-GFKVDRSEHKMGIRASDTCAVTLDNCRIPAANLLGERGKGLAIALSNLEGG 243 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 +I I A ++ R + A+ Y+R R G + + + +AD+ + I AA L Sbjct: 244 RIGI----AAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQINAARLL 299 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 A K EA+ A++ A +MA V + A++ GG GY+E+ + + Sbjct: 300 ILHAARLRTAGKPCLSEASQAKLFA-------SEMAERVCSMAIQVHGGYGYLEDYPVEK 352 Query: 433 HYRESPANSILLGS 446 +YR++ I GS Sbjct: 353 YYRDARITQIYEGS 366 >gi|91218198|ref|ZP_01255146.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC 700755] gi|91183656|gb|EAS70051.1| Acyl-CoA dehydrogenase-like protein [Psychroflexus torquis ATCC 700755] Length = 402 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 44/300 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 +G+TE G+D+ AI + D Y ++G K F+++ MSD I+ + + G V Sbjct: 130 IGMTEPNCGSDLQAIKTNAVDKGDH-YLVNGQKTFITNGYMSDMSIVAVKTKMGTGEEGV 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L+ + S G KIG ++ T EL F N LLG+ + KI+ Sbjct: 189 SLLIMESSFKGFEKGTPFKKIGMKAQDTCELFFDNVKVPKENLLGEEGLG------FKIM 242 Query: 316 IY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIAL 364 + L A+ ++ G ++ + + Y R QP+ + +A+ Sbjct: 243 MTELARERLTVALNAIGGAEGAIEKTLAYTSTRTA-----FKQPIAGFQNTQFKLAECTT 297 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A R + K +E A+ A KY +M V+ E ++ GG GY Sbjct: 298 QLQVHQAFLDRCTLLVSKHKLTAESASMA-------KYSATEMHGKVVDECLQLFGGYGY 350 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVI 484 I + IAR Y ++ I G+ M L L+ +G LF+ LF Q + ++ KK I Sbjct: 351 IWDYPIARMYADNRVARIYAGTNEIMKL----LIARG--LFKDLF----QQMKATKKKTI 400 >gi|281354503|gb|EFB30087.1| hypothetical protein PANDA_011372 [Ailuropoda melanoleuca] Length = 405 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 39/280 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P + IG L +TE G+D+ I + +K DG + L+G K F+++ +SD I++ Sbjct: 134 PQMTSGKCIGALAMTEPGAGSDVQGIRTNAKK--DGSDWILNGSKVFITNGWLSDVLIVV 191 Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 A + FLV E G + Q+L+ K+G ++ T EL F + Sbjct: 192 AVTNHEAHSPAHGISLFLV----ESGMKGFIKGQKLQ-KMGLKTQDTAELFFEDVRLPAS 246 Query: 297 FLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 LLG+ N + P E + I A +++S E +Y + R G + Sbjct: 247 ALLGEENKGFYYLMQELPQERLLI------ADLAISASEFMFEETRNYVKERKAFGKTIA 300 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++ +A++ I A D E+ A + KYW ++ Sbjct: 301 HMQTVRHKLAELKTQICVTRAF-------VDSCLQLHEKKRLDSATASMAKYWASELQNR 353 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V + ++ GG GY+ E IA+ Y ++ A I G+ M Sbjct: 354 VAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIYGGTNEIM 393 >gi|260802288|ref|XP_002596024.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae] gi|229281278|gb|EEN52036.1| hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae] Length = 1110 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 42/271 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L ++E G+D+ ++ ++ +K D Y L+G K W + P +D ++ A+ E Sbjct: 810 LAMSEANAGSDVVSMRTKAEKHGD-YYVLNGTKFWITNGPDADTLVVYAKTEPHADKPQH 868 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 V F++ R +E G +K+G R + T EL F + +LG +N Sbjct: 869 GVTAFIIERGME-----GFSTSPKLDKLGMRGSNTCELVFEDCKVPASHVLGQIN----- 918 Query: 309 VEDMKILI--------YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 + + +L +L + + V M+ L + Y R G + +M+ +A Sbjct: 919 -KGIYVLFSGLDIERCFLAAGPLGV--MQSVLDVTVPYLHTREAFGQKIGTFQMMQGKMA 975 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+ ++ + + +A + D ++ A A + A + A V + ++C+G Sbjct: 976 DMYTQLSVCRSYVYNVARALDRGCIIPKDCAGAILFA-------AECATKVALDGIQCLG 1028 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAMV 451 G+GY+ + R R++ I G+G + V Sbjct: 1029 GNGYVNDYPTGRFLRDAKLYEI--GAGTSEV 1057 >gi|89100684|ref|ZP_01173541.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89084630|gb|EAR63774.1| acetyl-CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 594 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 37/314 (11%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 S+T + V + + P V +F E P+ T I LTE G+D Sbjct: 109 SITHGAHVGIGSLPIV-------LFGDEEQKQKYLPLLATGEKIAAYALTEPGSGSDALG 161 Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270 + + ++G Y L+G K W ++ +D F++ A+V+G F+V R G+ Sbjct: 162 AKTTAKLNAEGTHYVLNGEKQWITNAGFADVFVVYAKVDGEHFSAFIVER-----EYPGV 216 Query: 271 CYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325 + K+G +S++T L + LLG+L G + IL + +V Sbjct: 217 STGPEEKKMGIKSSSTRTLILEDAQVPKENLLGEL--GKGHIIAFNILNIGRYKLGVGAV 274 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + + + Y +R + + K +A++A + AA + +R F++ S Sbjct: 275 GASKRAYEVTVQYTNQRQQFKTPISQFNLTKEKLANMAAKLYAAESSVYRTVGLFEDRMS 334 Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R +EE A YA I + K++ ++ + E ++ GG G++ E I R Sbjct: 335 RLTEEEVKNGKEVANSIAEYA-IECSLNKFFATEVLDYIADEGVQLHGGYGFMAEYEIER 393 Query: 433 HYRESPANSILLGS 446 YR+S N I G+ Sbjct: 394 IYRDSRINRIFEGT 407 >gi|256425244|ref|YP_003125897.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] gi|256040152|gb|ACU63696.1| acyl-CoA dehydrogenase domain protein [Chitinophaga pinensis DSM 2588] Length = 379 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/289 (20%), Positives = 118/289 (40%), Gaps = 35/289 (12%) Query: 174 WAPKIFSREYDPTNK-APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W + + E P+ K + L+E G+D + ++ + D Y ++G K Sbjct: 96 WGLETYGTEEQKQQYLVPLAKGEITGAFLLSEPEAGSDATSQRTKAEDKGDH-YLVNGTK 154 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + + ++++AQ G + L+ + + G+ +NK+G R Sbjct: 155 NWITNGSSASVYLVIAQTHVEKGSKGINALIIEKNSPGVVVGAKENKMGIRG-------- 206 Query: 292 SNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------AIH 337 S+T + D+ V P E+ + A+ +++G R+ +A A+ Sbjct: 207 SDTHSIMFQDVKV---PKENRIGEDGFGFKFAMKTLAGGRIGIASQALGIASGAYELAVK 263 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 YA+ R G + ++ +AD+A I A+ L + A D + + A++ + Sbjct: 264 YAKERKAFGKEISQHQAIQFKLADMATRIEASRLLCLKAAREKDLHLDYTLSGSMAKVFS 323 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 T W V EA++ GG GY++E + R R++ I G+ Sbjct: 324 SETAMW-------VTTEAVQVHGGYGYVKEYHVERLMRDAKITQIYEGT 365 >gi|124268354|ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] gi|124261129|gb|ABM96123.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] Length = 422 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++ ++ + + G Y LSG K W +SP++D F++ A+ + G++ F+ Sbjct: 166 FGLTEPNHGSDPGSLATRARAVQGG-YVLSGAKMWITNSPIADVFVVWAKDDGGQIRGFI 224 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 + D GL + K+G R++ T E+ F ++ GP Sbjct: 225 L-----DKGMKGLEAPAVHGKVGLRASLTGEIVMDEVFCPEENAFPEVRGLKGP------ 273 Query: 315 LIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+SA ++ + AE H AR+ R G L ++++ +AD+ +I Sbjct: 274 FTCLNSARYGIAWGALGAAEDCFHRARQYVLDRPQFGRPLAANQLIQKKLADMQTEITLG 333 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 RL DE + E + I K C + + A + +GG+G +E Sbjct: 334 LQGCLRLGRMKDEGTAAVE-------ITSIMKRNSCGKSLEIARMARDMMGGNGISDEFG 386 Query: 430 IARH 433 +ARH Sbjct: 387 VARH 390 >gi|86751041|ref|YP_487537.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gi|86574069|gb|ABD08626.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris HaA2] Length = 390 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ +K D + L+G+K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRAEKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGM 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLVEKGFKGFSTAQKLDKLGMRGSDTGELVFEDCEVPEENVLGEVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A + M+ + + Y R G + +++ IAD+ + + A+ A Sbjct: 250 ERAVL----AAGPLGIMQACMDVVMPYVHERKQFGEPIGTFQLVQAKIADMYVTMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A C +A++ +GG+GYI + Sbjct: 306 YVYAVAKACDRGQTTREDAAGAILYAAEKATQCA-------LDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|51894146|ref|YP_076837.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863] gi|51857835|dbj|BAD41993.1| acetyl-CoA dehydrogenase [Symbiobacterium thermophilum IAM 14863] Length = 589 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/310 (22%), Positives = 124/310 (40%), Gaps = 62/310 (20%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + PK+ + E+ LTE G+D + + DG Y Sbjct: 127 TPEQKAKYLPKLATGEW-------------VAAYALTEPNAGSDALGARTTARLSEDGKY 173 Query: 227 -CLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 L+G K W ++ +D F++ A+V+G + F+V R G+ + K+G Sbjct: 174 WILNGTKQWITNAGFADVFVVYAKVDGEKFSAFIVERNF-----PGVSIGPEEKKMG--- 225 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--------------SVSGMR 329 L S+T +L D V PVE++ I I +V + Sbjct: 226 -----LHASSTCSLILEDAKV---PVENLLGEIGKGHVIAFNILNIGRWKLGAGTVGSSK 277 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN----------- 378 + LA +I YA+ R G + + +++ +AD+A+ ++ +R A Sbjct: 278 MVLATSIEYAKTRKQFGKPIAELRAIQQKLADMAVRTYVTESMGYRTAGLLDSSLSDLDP 337 Query: 379 --SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E R EE A + I K + + V E ++ GG G+++E +++ YR+ Sbjct: 338 NADMREVGKRLEEYA---MECSIMKVFGSEAFDFVADEGVQIHGGYGFMDEYAVSMAYRD 394 Query: 437 SPANSILLGS 446 S N I G+ Sbjct: 395 SRINRIFEGT 404 >gi|327352743|gb|EGE81600.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188] Length = 433 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 45/298 (15%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + + + DG + L+G K W + Sbjct: 142 NGSPEQKARFLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITN 200 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ + G + + + + G R +K+G R + T EL F F Sbjct: 201 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEGVFV 260 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG+LN +K+L+ L+ ++S M+ +L + Y R G Sbjct: 261 PRENMLGELN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGI 314 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----------RSEEAAYARIMA 397 + +++ +AD+ ++A+ A ++ A DEA + R+++ A A + A Sbjct: 315 PIARNQLVQGKLADMYTKLSASRAYTYTTARQIDEAAASSSEASNSAIRTQDCAGAILYA 374 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 C +A++ +GG+GYI E R R++ I G+G + + +L Sbjct: 375 AERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEI--GAGTSEIRRML 423 >gi|157105307|ref|XP_001648811.1| acyl-coa dehydrogenase [Aedes aegypti] gi|108869037|gb|EAT33262.1| acyl-coa dehydrogenase [Aedes aegypti] Length = 420 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 23/256 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256 +TE G+D+ + ++ +K D Y L+G K W + +++ + +LA+ C Sbjct: 157 VTEPGAGSDVNGVKTRAEKKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 215 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 ++E +P GL R + +G R++ T + F + + NV G KI + Sbjct: 216 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGSGFKIAM 271 Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D V+ V LA EA+ Y+ R G + + +AD+A+ + A Sbjct: 272 GTFDKTRPPVAAGAVGLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETAR 331 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ + A D+ + S A I K + MA V ++A++ GG+G+ E + Sbjct: 332 LITMKSAWEVDQGRRNS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPV 384 Query: 431 ARHYRESPANSILLGS 446 + R++ I G+ Sbjct: 385 EKLMRDAKIYQIYEGT 400 >gi|319952333|ref|YP_004163600.1| butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] gi|319420993|gb|ADV48102.1| Butyryl-CoA dehydrogenase [Cellulophaga algicola DSM 14237] Length = 380 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 39/291 (13%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH 231 W ++F+ E T IG L+E G+D A + + I G Y L+G Sbjct: 96 WGLEMFANEEQKQKYLTKLATGEMIGAFCLSEPEAGSD--ATSQKTTAIDKGDHYLLNGT 153 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + + ++++AQ + G + L+ E G+P G +NK+G R Sbjct: 154 KNWITNGSTAGVYLVIAQTDIEKGHKGINALIVEKGTP-GFEIGPKENKLGIRG------ 206 Query: 290 EFSNTFGFLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLAE------------A 335 S+T + D+ V P E+ + A+ ++SG R+ +A A Sbjct: 207 --SDTHSLMFNDVKV---PKENRIGEDGFGFKFAMKTLSGGRIGIAAQALGIAAGAYELA 261 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y++ R G + + + +AD+ +I AA L ++ A D K+ +A A++ Sbjct: 262 LKYSKERKSFGTEICNHQAIAFKLADMHTEIEAARLLVYKAALDKDNGKNYDLSSAMAKL 321 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + K+A EA++ GG+G++++ + R R++ I G+ Sbjct: 322 -------YASKVAMDTTVEAVQIHGGNGFVKDYHVERLMRDAKITQIYEGT 365 >gi|306797293|ref|ZP_07435595.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006] gi|308342361|gb|EFP31212.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu006] Length = 609 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 47/298 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + + F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP L D G+ NG+ L++K+G +S+ T EL F G+L+ Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347 G V G + ++ + + + S + A+ +A+ R V G Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397 ++ P ++R++ AL A D+A ++ A ++ Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 PI K + A ++ E+++ +GGSG++ + + ++ R++ +S+ G+ LD Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDAKIDSLYEGTTAIQALDFF 458 >gi|295695701|ref|YP_003588939.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411303|gb|ADG05795.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 594 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 47/275 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEG-RVGCFLV 258 LTE G+D + ++G Y L+G K F+++ +D FI+ A+V+G + F+V Sbjct: 148 LTEPTSGSDALGAKTTAVLNAEGTHYILNGTKQFITNAGFADLFIVYAKVDGEKFTAFIV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM--KI-- 314 R G P G+ + K+G + ++T +L +L D+ V PVE++ +I Sbjct: 208 ER----GFP-GVSTGPEEKKMGIKGSSTRQL--------ILEDVPV---PVENVLGQIGK 251 Query: 315 --LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 LI + A V +++LA + YA+ R G + + P+++ +A +A+ Sbjct: 252 GHLIAFNILNIGRYKLAAGCVGSSKIALAMSAKYAKERSQFGKPIAEFPLIQNKLATMAV 311 Query: 365 DIAAATALSFRLANSFDEA-------------KSRSEEAAYARIMAPITKYWCCKMAPAV 411 AA ++ +R FD ++ + YA + I K + ++ AV Sbjct: 312 RTFAAESVIYRTVGLFDRQLQDFDLTQDEVGMQAAAAIGEYA-LECSINKVFGSEVLDAV 370 Query: 412 IAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 E ++ GG G+I E R YR+S N I G+ Sbjct: 371 ADENVQIHGGYGFIAEYGAERIYRDSRINRIFEGT 405 >gi|262204023|ref|YP_003275231.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087370|gb|ACY23338.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 383 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 41/309 (13%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A ++ L T + + P++ + E T + LTE GG+D+ Sbjct: 86 MGGHTVVAKLLTLFGTEEQKQTYLPRLATGEMRAT-------------MALTEPGGGSDL 132 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-------AQVEGRVGCFLVPRLLED 264 ++T+ ++ D + +SG K ++S+ I L AQ R G +V L E Sbjct: 133 QSMTTLAREEGDDL-VISGSKTWISNARRSGLIALLCKTDPKAQPRHR-GISIV--LCEH 188 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LD 319 G GL R K+G + + EL F +LG + G + MK L + Sbjct: 189 GP--GLTVSRDLPKLGYKGVESCELSFDGYRVPRSAILGSV-AGKGFSQMMKGLETGRIQ 245 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A ++ +L +++ YA++R G + + +AD+A + AA L++ A Sbjct: 246 VACRALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAEQ 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +D + EA A++ A ++A + A+ GG GY E I R++R++P Sbjct: 306 YDRGRRCDMEAGMAKLYA-------SEVAMEIALNAVRIHGGYGYSTEFDIERYFRDAPL 358 Query: 440 NSILLGSGN 448 +++G G Sbjct: 359 --MIVGEGT 365 >gi|289613968|emb|CBI59202.1| unnamed protein product [Sordaria macrospora] Length = 438 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 29/256 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ ++ +Y LSG K W +SP++D ++ A Sbjct: 165 MAKGKIIGAFGLTEPNHGSDPGSMETVARPHPTKKDVYLLSGAKTWITNSPIADVLVVWA 224 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 +++ G++ FLV R P L ++KNK G R++ T ++ N + ++ Sbjct: 225 KLQETGKIRGFLVER--SACPPGTLETPQIKNKTGLRASITGMIQLDNCPVPKENMFPEV 282 Query: 303 NVSTGPVEDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMK 356 GP L+SA ++ GM +L + + AR R+ G L +++ Sbjct: 283 EGLKGP------FTCLNSARYGIAFGMMGALEDCLSRARTYALERKQFKGNPLAKYQLVQ 336 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + +A+ D+A T + ++ DE K+ E M + K C Sbjct: 337 KKLAEAITDVAYGTLAAIQVGRLKDEGKATPE-------MISMIKRQNCDRTLYHARTLQ 389 Query: 417 ECIGGSGYIEERSIAR 432 E GG+ +E I R Sbjct: 390 EIFGGNAVSDEYHIGR 405 >gi|254384717|ref|ZP_05000055.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194343600|gb|EDX24566.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 386 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 44/312 (14%) Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223 L T ++W P++ S E + GLTE GG+D + K D Sbjct: 102 LFGTEEQKREWLPRMCSGE-------------ILGAFGLTEPDGGSDAGGTRTTAVKDGD 148 Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274 + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 149 -EWVINGSKCFITNSGTDITGLVTVTAVTGRKADGRPEISSIIVP----SGTP-GFTVAA 202 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA- 333 +K+G S+ T EL F + L +L + G + L LD +++S + LA Sbjct: 203 PYSKVGWNSSDTRELSFQDVR-VPLANLVGAEGRGY-AQFLRILDEGRIAISALATGLAQ 260 Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 E++ YA+ R G + D ++ +AD+ + A + +R +A SR Sbjct: 261 GCVDESVKYAKERKAFGRPIGDNQAIQFKLADMEMR-AHMARIGWR------DAASRLVA 313 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 + A I K + +A +A + GG G++ E +AR +R+S + +G G + Sbjct: 314 GEPFKKEAAIAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIGEGTS 371 Query: 450 MVLDVLNLLEKG 461 V +L E G Sbjct: 372 EVQRMLIARELG 383 >gi|152125905|gb|ABS29300.1| butyryl-CoA dehydrogenase [Fusobacterium necrophorum] Length = 303 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 37/291 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD------IAAITSQGQKISDGIY 226 W F E P + IG GLTE GTD IA Q+ + Sbjct: 18 WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTDASGQQTIAVFDEATQE-----W 72 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F+++ + +++ A + G + ++E G+P G + + K+G R + Sbjct: 73 VINGSKIFITNAGYAHVYVIFAMTDKSKGVKGISAFIIEAGTP-GFSIGKKEKKLGIRGS 131 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335 AT EL F + LLGDL + KI ++ LD + ++ + LA EA Sbjct: 132 ATCELIFEDVRLPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 185 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y + R G L +A++ + + AA L ++ A + +AA A++ Sbjct: 186 VQYVKERKQFGRALSKFQNTAFQLANLEVKVEAARLLVYKAAWKESNHLPYTVDAARAKL 245 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A T A V +A++ GG GY E + R R++ I G+ Sbjct: 246 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 289 >gi|94469208|gb|ABF18453.1| mitochondrial medium-chain acyl-CoA dehydrogenase [Aedes aegypti] Length = 422 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 23/256 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----F 256 +TE G+D+ + ++ +K D Y L+G K W + +++ + +LA+ C Sbjct: 159 VTEPGAGSDVNGVKTRAEKKGDE-YILNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 217 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 ++E +P GL R + +G R++ T + F + + NV G KI + Sbjct: 218 FTGFIVERDTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGSGFKIAM 273 Query: 317 -YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 D V+ V LA EA+ Y+ R G + + +AD+A+ + A Sbjct: 274 GTFDKTRPPVAAGAVGLAQRALDEAMKYSLERKTFGVPIAAHQAVSFMLADMAIGVETAR 333 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ + A D+ + S A I K + MA V ++A++ GG+G+ E + Sbjct: 334 LITMKSAWEVDQGRRNS-------YYASIAKCYAADMANKVASDAVQIFGGNGFNTEYPV 386 Query: 431 ARHYRESPANSILLGS 446 + R++ I G+ Sbjct: 387 EKLMRDAKIYQIYEGT 402 >gi|18312597|ref|NP_559264.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] gi|18160066|gb|AAL63446.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] Length = 410 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 25/266 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQV----EGRVG 254 +TE G+D+A I ++ +K D + ++G K F+SS ++D FI+LA+ + +V Sbjct: 132 FAVTEPCCGSDVAGIQTKAEKKGDK-WVINGRKAFISSSDVADFFIVLARTYPPPDKKVR 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + + + G ++ +K+G N EL N + D N G E M Sbjct: 191 YLGLTFFIVEKDTPGFKVEQCYHKMGLYGNHACELVLENV---EVPDEN-RVGE-EGMGF 245 Query: 315 LIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 L +++ A +V + + +A Y +R G + ++ ++ ++ I Sbjct: 246 LYAMETFDRTRIGVAAQAVGMAQAAFEKAFQYVHQRQAFGVPIAYFQAIQFSLVEMMAKI 305 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A L++ A DE + +A + K++ ++A VI+EA+ GG G I Sbjct: 306 FTARLLTYLAAKLADEDRREF------TFVASLAKFYATEVAEEVISEAINLHGGVGVIR 359 Query: 427 ERSIARHYRESPANSILLGSGNAMVL 452 E + R R I G+ N L Sbjct: 360 ETGVERFLRSVKITQIYEGANNIQKL 385 >gi|322508306|gb|ADX03760.1| Putative acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323517932|gb|ADX92313.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] Length = 427 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%) Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y + G K + ++D F++ A G+ F+V + G + + +G ++ Sbjct: 220 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 272 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 T L+FS+T LG + D+ L++ A+ + ++ A I YA R Sbjct: 273 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 329 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + IAD+A++I A L A+ + K EA ARI+ C Sbjct: 330 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 382 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 383 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 421 >gi|313672308|ref|YP_004050419.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939064|gb|ADR18256.1| acyl-CoA dehydrogenase domain-containing protein [Calditerrivibrio nitroreducens DSM 19672] Length = 379 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 35/298 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F E P+ IG + LTE G+D+A I + ++ D + L+G+K F+++ Sbjct: 101 FGNEDQKKKYLPLLAKGEKIGCILLTEPEAGSDVANIQTTYKREGD-YFILNGNKIFITN 159 Query: 238 PMSDAF-IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG 296 ++ A + + + + D G+ + + K+G R + T + F+N Sbjct: 160 GGFKGIGVVFASFDRSLKHKGLSAFIIDLESEGVEILKNEEKMGIRGSYTTAIGFNNV-- 217 Query: 297 FLLGDLNVSTGPVEDM--KILIYLDSAIMSVSGMRVSLA------------EAIHYARRR 342 PVE++ K A+ +++G R+ +A A+ Y++ R Sbjct: 218 ---------KIPVENLLGKEGDGFKIAMETLNGGRIGIAAQALGIAEGAFERALAYSKER 268 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + ++ +AD+ I A ++++ A + K+ + E+A I K Sbjct: 269 KQFGKPISENQAIQFKLADMIAKIETAKLITYKAAWLKNMKKTNAMESA-------ICKM 321 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V EA++ GG GYI E + R YR++ I G+ + + +L K Sbjct: 322 YASEVATYVTKEAVQIFGGYGYICEYEVERMYRDAKITEIYEGTNEVQRIVISKMLLK 379 >gi|296818839|ref|XP_002849756.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS 113480] gi|238840209|gb|EEQ29871.1| long-chain specific acyl-CoA dehydrogenaser [Arthroderma otae CBS 113480] Length = 542 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE G+D++ ++ + + DG Y ++G K W + MSD F + G G Sbjct: 266 ICLAITEPGAGSDVSNLSCEAKLTPDGKHYIVNGEKKWITNGIMSDYFTTAVRT-GEPGM 324 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV--- 309 V LL + S G+ +++ + G S+ T + F + G L+G N + Sbjct: 325 GGVSVLLIERSMGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVGNLIGKENKGFKVIMTN 383 Query: 310 ---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 E M I+I + RV E++ YA +R G LID PV++ +A +A I Sbjct: 384 FNHERMGIII------QCLRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHMARQI 437 Query: 367 AAATALSFR-LANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAM 416 A SF L N + + E+ A R+ I T +C + A + Sbjct: 438 EA----SFNWLENLVFQCQHMDEDTAALRLGGAIASLKAQSTTTFEFCAREASQIFGGLS 493 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G + R YR+ A +I GS M+ Sbjct: 494 YSRGGQG----GKVERLYRDVRAYAIPGGSEEIML 524 >gi|167588029|ref|ZP_02380417.1| AMP-dependent synthetase and ligase [Burkholderia ubonensis Bu] Length = 1279 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 22/282 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS---DAFIMLAQVEGRVGC 255 +TE G+ + AITS+ Q+I G + ++G K W SS + + F A G VG Sbjct: 739 FAITEPAAGSHLRAITSRAQRIDTGDWLVTGTKSWSGSSAWAGIINVFAKQADGAGMVGL 798 Query: 256 FLVPRLLEDGSPN-GLCYQRLKNKIGNRSNATVELEFSN-TFGFLLGDLNVSTGPVEDMK 313 + P G+P + + L + ++ L+ + + + LGD+ + Sbjct: 799 AVRP-----GTPGVRIGAEELTMGVRGMIQNSLHLDRARISDAYRLGDIGQGMPVAQHAM 853 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + L A +S+ M+ A+ +H Y RR + G+L+D P+ + + ++ I A Sbjct: 854 NIARLAIAAVSLGAMK-RCAQLMHRYGARRRIGTGLLLDNPLSRLRLGELRHRIDGLNAF 912 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 LA D + E+ I+K ++ E M+ +GG GYIE + Sbjct: 913 VEHLAAELDLGVAVPEDCLL------ISKILGSELLSQSADEMMQFLGGRGYIETNLAPQ 966 Query: 433 HYRESPANSILLGSGNAMVLDVLN--LLEKGTNLFEQLFSTL 472 +R++ I G + LD L LL G +L L + L Sbjct: 967 IFRDARLTRIFEGPTETL-LDHLGSRLLNGGDDLLRYLENAL 1007 >gi|328873098|gb|EGG21465.1| isovaleryl-CoA dehydrogenase [Dictyostelium fasciculatum] Length = 848 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ DG + ++G+K W + P +D ++ A+ + G + Sbjct: 589 LAMSEPNAGSDVVSMKTHATRV-DGGWKINGNKMWITNGPDADVLVVYAKTDPAGGSKGI 647 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + F + D NV +++L+ Sbjct: 648 TAFLIEKGMKGFSTGQKLDKLGMRGSNTCELIFEDCF---VPDENVMGTVGSGVRVLMSG 704 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +S M+ + + + Y R G + + +M+ +AD+ + A+ + Sbjct: 705 LDYERLVLSAGPLGIMQSCMDQVVPYIHTREQFGKKIGEFQLMQGKVADMYTLLNASRSY 764 Query: 373 SFRLANSFDEA-KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D SR + AA + + A + +A++ +GG+GYI E Sbjct: 765 VYTVARAADAGLVSRKDCAAVI--------LYSAENATQLALQAIQTLGGNGYINEFPTG 816 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 817 RLLRDAKLYEIGAGT 831 >gi|121712200|ref|XP_001273715.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] gi|119401867|gb|EAW12289.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] Length = 457 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 36/268 (13%) Query: 111 IHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRV 170 +H G++C + EP K MAQL L P + + A P + Sbjct: 103 LHTGIYCDEVGQVPEPECTKAD----------MAQLGRSGLAGPGASLNAGFAFGIPPIL 152 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLS 229 + + P ++ +AI TE G+D+A IT+ K DG Y ++ Sbjct: 153 --KYGSEELQERVLPELLTGKKRACIAI----TEPEAGSDVANITTTATKSPDGKYYIIN 206 Query: 230 G-HKWFLSSPMSDAFIMLAQVEGR----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 G KW + SD M + G + LVP G P G+ +RLK G + Sbjct: 207 GTKKWITNGIWSDYTTMAVRTGGPGAAGLSVILVPL---KGHP-GVTMRRLKVS-GQLTG 261 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY------LDSAIMSVSGMRVSLAEAIHY 338 T +E + +G+L G E M+I++ L A+ RV+LA A+ Y Sbjct: 262 GTTYIELDDV-QVPVGNLIGREG--EGMRIIMTNFNHERLTIAVGVTRQARVALASAVQY 318 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDI 366 +R G L+DQPV++ +A ++ Sbjct: 319 TMKREAFGKTLMDQPVVRHRLAKAGAEL 346 >gi|303325028|pdb|3MPI|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Glutaryl-Coa Complex gi|303325029|pdb|3MPI|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Glutaryl-Coa Complex gi|303325030|pdb|3MPI|C Chain C, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Glutaryl-Coa Complex gi|303325031|pdb|3MPI|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Glutaryl-Coa Complex gi|303325032|pdb|3MPJ|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase gi|303325033|pdb|3MPJ|B Chain B, Structure Of The Glutaryl-Coenzyme A Dehydrogenase gi|303325034|pdb|3MPJ|D Chain D, Structure Of The Glutaryl-Coenzyme A Dehydrogenase gi|303325035|pdb|3MPJ|E Chain E, Structure Of The Glutaryl-Coenzyme A Dehydrogenase gi|303325036|pdb|3MPJ|F Chain F, Structure Of The Glutaryl-Coenzyme A Dehydrogenase gi|303325037|pdb|3MPJ|G Chain G, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Length = 397 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%) Query: 170 VHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLS 229 + K + PK+ S E+ G G+TE G+D+ A++S + D + L+ Sbjct: 109 LKKKYVPKLSSAEF-------------LGGFGITEPDAGSDVMAMSSTAEDKGDH-WLLN 154 Query: 230 GHK-WFLSSPMSDAFIMLAQVEGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 G K W ++ +D I A + G L ++E + G+ L+ K+G+ ++ T Sbjct: 155 GSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSHASPTG 213 Query: 288 ELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHYARR 341 EL N + N+ P + +I+ L+ +S + V LA+A I Y Sbjct: 214 ELFLDNV---KVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNE 270 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + D + + IA +A+++ AA L+++ A + DE + + + + K Sbjct: 271 RRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNN------GLDVAMAK 324 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 Y + AM +G GY E +AR YR++P ++ GS N Sbjct: 325 YAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSAN 371 >gi|294877938|ref|XP_002768202.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239870399|gb|EER00920.1| Acyl-CoA dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 432 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 24/268 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGH-KWFLSSPMSDAFIMLAQVEGRVGC 255 I L +TE + G+D+A+I + + +DG Y ++G KW + SD F + G G Sbjct: 156 ISLAITEPQTGSDVASIRATAKLSADGKHYIVNGEKKWITNGIFSDYFTTAVRT-GPEGM 214 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + LL P G+ +++ + G S+ T +EF++ +LG N E Sbjct: 215 NGISVLLIPKGP-GVTVRQMDCQ-GVWSSGTTFVEFNDVKVPVENMLGKEN------EGF 266 Query: 313 KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+++Y + +V R+ + YA++R G LI+ P+++ +A++A I Sbjct: 267 KVIMYNFNHERWGFVVQAVRFSRLLYEVSFKYAQKRKTFGKTLIEHPLIRWKLAEMARQI 326 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A A L + + +A + K C KM EA + GG+ Y Sbjct: 327 EGAHAWMESLTHQLCTMPPKQAVLMLGGPLA-LCKAHCTKMFEYCAREASQIFGGNAYTR 385 Query: 427 E---RSIARHYRESPANSILLGSGNAMV 451 + R YR+ A +I GS M+ Sbjct: 386 SGLGEVVERLYRDVRALAIPGGSEEIML 413 >gi|121611102|ref|YP_998909.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121555742|gb|ABM59891.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 388 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 27/298 (9%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + + + ++ R PT + LG++E G+D+A++ + +K D Sbjct: 92 MATPALARFGSDELRERFLKPTVAG-----DYVVCLGVSEAGAGSDVASVKTTARKDGDD 146 Query: 225 IYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVGCFLVPRLLEDGSPN-GLCYQRLKNK 278 Y ++G K W + +D +LA G R + L E+G G+ ++K K Sbjct: 147 -YVINGSKMWITNGLQADWMCLLANTGGEDPHRNKSLICLPLRENGKLRPGITMNKIK-K 204 Query: 279 IGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLA 333 +G S+ T ++ F + + +G+ G + MK L A V+ + + Sbjct: 205 VGMWSSDTAQVFFDDVRVPQRYRIGE--EGKGFIYQMKQFQEERLSGATRRVTALMNVVH 262 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E I Y R+R G ++D V+ +A++ +I +L +R A +E A+ A Sbjct: 263 ETIDYTRQRKAFGQSILDNQVVHFRMAELKTEIELLRSLIYRAAQVHMADGDMTELASMA 322 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ A ++ V ++ GG G+ + S++R +R+ SI G+ M+ Sbjct: 323 KLKAG-------RLCREVTDSCLQYWGGMGFTWDNSVSRAWRDLRLISIGGGADEIML 373 >gi|300692750|ref|YP_003753745.1| acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum PSI07] gi|299079810|emb|CBJ52487.1| putative acyl-CoA dehydrogenase oxidoreductase [Ralstonia solanacearum PSI07] Length = 393 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ IG L ++E G+D+ ++ + ++ D Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAERRGDH- 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P D ++ + E +G + + + G + +K+G R + Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHY 338 T EL F N +LG+ N T + M L Y + A++S + M+ + Y Sbjct: 214 HTGELVFDNVEVPAENVLGEENGGTRVL--MSGLDY-ERAVLSGGPIGIMQACMDVVTPY 270 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 R G + + +++ IAD+ + A A + + + D A R + A Sbjct: 271 IHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGKNLD-ALGREHVRQVRKDCAG 329 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + Y + A + EA++ +GG+GYI E R +R++ I G+ Sbjct: 330 VILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAKLYEIGAGT 376 >gi|239983347|ref|ZP_04705871.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291455171|ref|ZP_06594561.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] gi|291358120|gb|EFE85022.1| acyl-CoA dehydrogenase [Streptomyces albus J1074] Length = 401 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 73/294 (24%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSP 267 G+D++AI+++G K+ D Y L+G K +L++ S + + C ++G P Sbjct: 135 GSDVSAISTKGVKVGD-EYALTGQKMWLTNGGSSTLVAVL-------C-----RTDEGHP 181 Query: 268 NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 G ++S T +E FG + L + G +E M +D+ M + G Sbjct: 182 EGTAP--------HKSMTTFLVEKEPGFGEVRPGLTIP-GKIEKMG-YKGVDTTEMILDG 231 Query: 328 MRV--------------------------------------SLAEAIHYARRRHVSGGIL 349 +R+ + + YA++RH G + Sbjct: 232 LRIPANRVLGGTTGRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPI 291 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++ +A++A + AA A+ A D + EA A+ +A ++Y CK A Sbjct: 292 AQHQAIQFKLAEMATKVEAAHAMMVNAARKKDSGERNDLEAGMAKYLA--SEY--CKEA- 346 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 + +A GG G+ +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 347 --VEDAFRIHGGYGFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|254250507|ref|ZP_04943826.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|124879641|gb|EAY66997.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 614 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 AP++ TE + GTD+ A+ + + IY + G K ++S+ M + + Sbjct: 148 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 207 Query: 244 IMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS 292 +L +++ + C +VPR D PN + L K+G + A L F Sbjct: 208 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFG 267 Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342 + T G+LLG NV ++++ ++ A MS V +A A+ YA RR Sbjct: 268 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 322 Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386 H + +++ ++R + D+ + L +LA + EA Sbjct: 323 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 382 Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 ++ A R ++ PI K + A + A++ GG GY + + ++ R+ Sbjct: 383 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 442 Query: 441 SILLGSGNAMVLDVL 455 SI G+ D++ Sbjct: 443 SIWEGTNYIQAQDLV 457 >gi|118443327|ref|YP_878397.1| (3-hydroxy)butyryl-CoA dehydrogenase [Clostridium novyi NT] gi|118133783|gb|ABK60827.1| (3-hydroxy)butyryl-coA dehydrogenase [Clostridium novyi NT] Length = 379 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLV 258 GLTE GTD + + K D Y L+G K F++ SP+++ F++ A + G + Sbjct: 123 FGLTEPNAGTDASGAQTVAVKDGDN-YILNGQKCFITNSPLAETFVIFAITDKSKGTKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM------ 312 + + G+ ++++K+G R E+ +L D V P E++ Sbjct: 182 SAFIVEKDFPGISIGKVEDKMGIRGAQVGEI--------ILEDCVV---PAENLLGKEGK 230 Query: 313 ---KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + LD + V+ + LAE A Y + R G L + +AD+ + Sbjct: 231 GFAIAMKTLDGGRIGVAAQGLGLAEGAFDAAREYMKERKQFGKQLYKFQGIAWRMADMDV 290 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I + L + A + S AA A++ C A V EA++ GG GY Sbjct: 291 RIEQSRYLLYTAAMDKNNGNPYSVSAARAKLS-------CTDTAMYVTTEAVQLFGGYGY 343 Query: 425 IEERSIARHYRESPANSILLGS 446 I++ + R R++ I G+ Sbjct: 344 IKDYPVERMMRDAKITQIYEGT 365 >gi|71279950|ref|YP_271311.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H] gi|71145690|gb|AAZ26163.1| glutaryl-CoA dehydrogenase [Colwellia psychrerythraea 34H] Length = 394 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 52/333 (15%) Query: 113 DGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHK 172 DG CS + +V ++ ++ + M+ +++ +M P + A TT + K Sbjct: 70 DGYGCSGVNYVSYGLVAREVERVDSGYRSAMS-VQSSLVMHP------INAYGTTEQKEK 122 Query: 173 DWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + PK+ + EY IG GLTE G+D +++ ++ +K+ DG Y L+G Sbjct: 123 -YLPKLATGEY--------------IGCFGLTEPGSGSDPSSMITRAKKV-DGGYRLTGS 166 Query: 232 K-WFLSSPMSDAFIMLA--QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVE 288 K W +SP++D F++ A + EG C V LE G GL +++ KI R++ T E Sbjct: 167 KMWITNSPIADVFVVWAKNEAEGNQICGFV---LEKGMA-GLSAPKIEGKISLRTSITGE 222 Query: 289 LEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + N F + ++ GP + + Y +S + AE + R++ Sbjct: 223 IVMDNVFVPEENMFPEIRGLAGPFGCLNMARY------GISWGALGAAEFCWHGARQYGL 276 Query: 346 GGILIDQP-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 I +P + + +A++ +I+ S R+ D K + M + Sbjct: 277 DRIQFKRPLAQTQLFQTKLANMQTEISLGLQASLRVGRIIDTKK-------WDPTMISMV 329 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 K C + + A + GG+G +E + RH Sbjct: 330 KRNNCGKSLDIARMARDMHGGNGISDEFHVIRH 362 >gi|26990765|ref|NP_746190.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida KT2440] gi|24985765|gb|AAN69654.1|AE016600_4 isovaleryl-CoA dehydrogenase [Pseudomonas putida KT2440] Length = 424 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 165 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 223 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G +K+G R + T EL F N G L G + V Sbjct: 224 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRV------- 276 Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD + +SG M+ + + Y R G + + +++ IAD+ + Sbjct: 277 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 334 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +A + D ++ ++AA + + + A + EA++ +GG+GYI Sbjct: 335 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 387 Query: 427 ERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 388 EFPAGRLLRDAKLYEIGAGT 407 >gi|186685963|ref|YP_001869159.1| acyl-CoA dehydrogenase type 2 [Nostoc punctiforme PCC 73102] gi|186468415|gb|ACC84216.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain protein [Nostoc punctiforme PCC 73102] Length = 399 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 125/308 (40%), Gaps = 45/308 (14%) Query: 172 KDWAPKIFSR--EYDPTNKAPMQKTSVAIGLGLTEKRGG--TDIAAITSQGQKISDGIYC 227 + W P+++ R A + V LG T RGG IA T++G + Sbjct: 111 RRWHPEVYKRLCRESIEGIALINAARVEPELG-TPARGGLPATIAEHTTEGWR------- 162 Query: 228 LSGHKWFLS-SPMSDAFIMLAQV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 L+GHK + + SP+ F++ A+ E +VG FLVPR L GL + +G R+ Sbjct: 163 LTGHKQYTTGSPILSYFVVWARTTEDEPQVGNFLVPRDLP-----GLQIVETWDHLGMRA 217 Query: 284 NATVELEFSNTFGFLLGDLN---VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA----- 335 + +L N L LN +S P D I + ++VS + + +A + Sbjct: 218 TGSHDLILENVLIPLEYALNLSPISAAPSLDPLISTW---GSLTVSALYLGVATSARDWL 274 Query: 336 IHYARRRHVSG--GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + Y R S L P + A+ +I + + A L + LA D R E Sbjct: 275 VKYLWERSPSNLKEPLATLPRFQTAVGEIEVLLFANNRLIYSLAEDID----RGEYDPNV 330 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE-------SPANSILLGS 446 + A KY + + A+E G G ++ + RHYR+ +P N ++ S Sbjct: 331 GLQAQAVKYLTTTNSIRAVEIALELTGNPGMLKRNPLERHYRDVLCSRIHTPQNDVICQS 390 Query: 447 GNAMVLDV 454 L V Sbjct: 391 LGKSALKV 398 >gi|126641422|ref|YP_001084406.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 338 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 61 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 105 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 106 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 165 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G +K+L+ + A++S M L I Y +R Sbjct: 166 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 222 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 223 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 282 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 283 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 321 >gi|88855166|ref|ZP_01129831.1| FadE19 [marine actinobacterium PHSC20C1] gi|88815694|gb|EAR25551.1| FadE19 [marine actinobacterium PHSC20C1] Length = 395 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 50/299 (16%) Query: 178 IFSREYDPTNK--APMQKTSVAI-GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWF 234 IF + D + PM A+ G GLTE G+D AA T ++ DG + ++G K F Sbjct: 108 IFKQGTDAQKQEWVPMLARGEALAGFGLTEADAGSD-AAGTKTTAELVDGEWVINGTKQF 166 Query: 235 LSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 +++ S+ + + V GR + LVP +G+P G +K+G ++ Sbjct: 167 ITNSGSEITKVVTVTAVTGRRENGKPELSAILVP----NGTP-GFTVHPAYDKVGWHTSD 221 Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-----RVSLAEAIH 337 T L F N LLG+ + LD ++ S + + L E+I Sbjct: 222 THPLSFDNVRVPEANLLGERGRGFA-----NFIETLDEGRVAFSALCTGAAQGCLEESIR 276 Query: 338 YARRRHVSGGILIDQPVMKRAIAD---IALDIA--AATALSFRLANSFDEAKSRSEEAAY 392 YA RHV G R+I IA IA A S RLA ++D A+ + Sbjct: 277 YANERHVFG----------RSIGSNQHIAFKIARMQARVHSARLA-TYDAARKLVAGVPF 325 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ A + K + A +A + GG G++ E +ARHYR+S + LG G V Sbjct: 326 -KMEASLAKMISSEAAMDNARDATQIFGGYGFMNENPVARHYRDSKV--LELGEGTTEV 381 >gi|84515514|ref|ZP_01002876.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53] gi|84510797|gb|EAQ07252.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53] Length = 407 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + + +K + G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPAGMKTTAKKTAGG-YVLNGSKMWISNAPIADVFVVWAKSEAHGGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ D GL ++ K+ R++ T E+ N +G+ + G V+ +K Sbjct: 208 FVL-----DKGMKGLSAPKVGGKLSLRASVTGEIVMDNV---EVGEDALLPG-VQGLKGP 258 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARR-----RHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A ++ + AEA +A R R G L + ++ +AD+ +IA Sbjct: 259 FGCLNRARYGIAWGVMGAAEACWHAARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIALG 318 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 T + +L + ++ E M + K C A + + + GG+G E+ Sbjct: 319 TQAALQLGRLMETGRAAPE-------MISLMKRNNCGKALDIARASRDMHGGNGISEDFQ 371 Query: 430 IARH 433 I RH Sbjct: 372 IMRH 375 >gi|284029421|ref|YP_003379352.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283808714|gb|ADB30553.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 387 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 23/270 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E G+D A++ ++ ++DG Y L+G K W ++ +SD + + A + + Sbjct: 129 LSEPEAGSDAASMKTRA--VADGSQYVLNGVKRWITNAGVSDYYTVFAVTDPSARSKGIS 186 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + + S G+ + + K+G + + T E+ F N ++G+ G + Sbjct: 187 AFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVRIPADRMIGEPGTGFGTA-----MA 241 Query: 317 YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD ++++ + +A+ A+ Y + R G + + ++ +AD+ + I AA Sbjct: 242 TLDHTRVTIAAQALGIAQGALDYALGYVKERKQFGKPIAEFQGLQFMLADMGMKIEAARQ 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L++ A A+S E A K + +A AV +A++ +GG GY + + Sbjct: 302 LTYAAA-----ARSERNEPDLTYFGA-AAKCFASDVAMAVTTDAVQLLGGYGYTHDYPVE 355 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEKG 461 R R++ I G+ + + L KG Sbjct: 356 RMMRDAKITQIYEGTNQVQRIVMARQLLKG 385 >gi|218659484|ref|ZP_03515414.1| acyl-CoA dehydrogenase domain protein [Rhizobium etli IE4771] Length = 282 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 30/263 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + ++ ++ D Y L G K F++S + I++ V G+ G Sbjct: 27 GFALTEPQAGSDASNLKTRARRDGDH-YVLDGAKQFITSGKNGNIIIVFAVTDPDAGKKG 85 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVS 305 F+VP G R++ K+G S T ++ F+ G ++ Sbjct: 86 ITAFIVPT-----ETPGYEVIRVEEKLGLHSTDTCQIAFNAMRIPVDLRLGAEGEGYRIA 140 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YA+ R G + + + +AD+A+ Sbjct: 141 LANLEGGRIGI----AAQAVGMARAAFEAARDYAKERMAFGKPIFEHQAVAFRLADMAVR 196 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L F A + EA+ A++ A +MA V ++A++ GG GY+ Sbjct: 197 IEAARQLVFHAAALREAELPCLSEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 249 Query: 426 EERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 250 ADYPVERIYRDVRICQIYEGTSD 272 >gi|297190904|ref|ZP_06908302.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197722698|gb|EDY66606.1| acyl-CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 401 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 35/275 (12%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+G K D Y L+G K +L++ + + + EG + Sbjct: 135 GSDVSAITSKGVKDGD-EYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--MK 313 L + P GL +K+G + T EL G + V G + Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMD---GLRIPANRVLGGTTGRGFYQ 250 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 ++ ++ ++V+ +A+ + YA++RH G + ++ +A++A + A Sbjct: 251 MMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKQIAQHQAIQFKLAEMATKVEA 310 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A+ A D + EA A KY + V+ +A GG G+ +E Sbjct: 311 AHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKEY 363 Query: 429 SIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 I R YRE+P +L+G G A + ++ LLE+ Sbjct: 364 EIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|124268544|ref|YP_001022548.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] gi|124261319|gb|ABM96313.1| isovaleryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] Length = 410 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 15/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + ++ D Y L+G K W + +D ++ A+ E G V Sbjct: 148 LAMSEPNAGSDVVSMKLRAERRGD-RYVLNGAKMWITNGGDADTMVVYAKTEPEAGAKGV 206 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 L+ + GL + +K+G R + T + F + + L G V+ + + Sbjct: 207 TALIVEKGFKGLSFGSKLDKLGMRGSNTYPVFFEDCEVPVDNVLGQEGGGVKVLMSGLDY 266 Query: 319 DSAIMSVSGMRVSLA---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A++S + + A + Y R G + + +M+ +AD+ +A A + Sbjct: 267 ERAVLSAGPLGIMAACMDLVLPYVHDRKQFGQSIGEFQLMQGKLADMYTTFSACRAYVYA 326 Query: 376 LANSFDEA---KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A +S ++AA A + A W + EA++ +GG+GYI E R Sbjct: 327 VGQACDRADHSRSLRKDAAGAILYAAEKATW-------MAGEAIQVLGGNGYINEYPAGR 379 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 380 LWRDAKLYEIGAGT 393 >gi|118590969|ref|ZP_01548369.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] gi|118436491|gb|EAV43132.1| acyl-CoA dehydrogenase-like protein [Stappia aggregata IAM 12614] Length = 386 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 32/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249 L +TE G+D+ + Q + G + +SG K F+S + +D FI+ Sbjct: 122 LAMTEPDAGSDVRGMKCQAVR-DGGDWVISGSKHFISGAEHADFFIVFVATGVDETPKGP 180 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---ST 306 + R+ CFLV R G+P G + + +R L F G L D V Sbjct: 181 KKRITCFLVDR----GTP-GFEVREGYRSVSHRGYKNCILYFD---GCRLPDSQVLGEVD 232 Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G E M +Y L A MSV R A++YA R G + + +AD+ Sbjct: 233 GGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQAIARFQGVSFQVADMI 292 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA L+ A D+ + E A A++ A +M V ++ GG G Sbjct: 293 TEIDAADWLTLAGAWRLDQGLPANREIASAKVYA-------SEMLARVTDTTLQIFGGMG 345 Query: 424 YIEERSIARHYRESPANSILLGS 446 +++ I R +R++ I G+ Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368 >gi|300711634|ref|YP_003737448.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3] gi|299125317|gb|ADJ15656.1| acyl-CoA dehydrogenase domain protein [Halalkalicoccus jeotgali B3] Length = 380 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 27/273 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + G LTE G+D + + ++ +K D Y L+G K F+++ I++ V Sbjct: 113 PLAEGEYVGGWALTEPGSGSDASDMNTRAEKDGDE-YVLNGTKQFITNASEAGSILVKAV 171 Query: 250 EG------RVGCFLV-PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLL 299 + F+V PR ED +G + K+G ++ T E++ + LL Sbjct: 172 TDPEAGYDGISTFIVDPR--ED---DGFEVTTIWEKMGLNASPTCEIQLDDVRLPEDRLL 226 Query: 300 GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RA 358 G+ V G + K L D +S++ + V LA+ + A R++ + QP+ K A Sbjct: 227 GE--VGDGWNQTKKTL---DGGRISIAALSVGLAQGAYEAARKYSTEREQFGQPISKFDA 281 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 + + + + T + L + R EE +A + C+ V +A++ Sbjct: 282 VRNTVVAMHRKTERARLLTHDAATTYDRGEEVTRKSALAKLDASEACR---EVAEDAVQV 338 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 +GG GY E+ + R YR+ A + +G G + + Sbjct: 339 LGGYGYTEDFAPQRFYRD--AKLMEIGEGTSEI 369 >gi|226954212|ref|ZP_03824676.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC 27244] gi|226835044|gb|EEH67427.1| acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter sp. ATCC 27244] Length = 382 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 31/303 (10%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 S +A + + T + W PK+ S E A+G +G+TE G+D+ A Sbjct: 92 SEIAAPYIQHIGTEEQKQYWLPKMVSGE--------------AVGAIGMTEPGAGSDLQA 137 Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + + + D Y L+G K F+S+ +D ++ + + + V LL D +G Sbjct: 138 MRTSA-ILQDDHYLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDTHLDGFKK 196 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--G 327 +KIG S T EL F N LLG N +G M+ L +AI S + Sbjct: 197 GTNLDKIGLHSQDTSELFFDNVKVPKDQLLG--NAGSGFAYLMQELPRERTAIASTALGA 254 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +R S+ A Y + R G + + +A +D A A + + + K Sbjct: 255 IRGSIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVELYMQGKLDV 314 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E AA K + M V ++ GG GY+ E I+R + ++ I G+ Sbjct: 315 ETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTN 367 Query: 448 NAM 450 M Sbjct: 368 EIM 370 >gi|167578692|ref|ZP_02371566.1| AMP-binding domain protein [Burkholderia thailandensis TXDOH] Length = 642 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 16/270 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+++ AI S Q++ + +SG K W SS + + A+ G +V Sbjct: 108 LTEPAAGSNVRAIASVAQRVDGDQWLVSGQKSWSGSSAWAGVINVFAKQAD--GAGMVGL 165 Query: 261 LLEDGSPNGLCYQRLKNKIGNRS--NATVELEFSN-TFGFLLGDLNVSTGPVEDMKILIY 317 + G+P GL +G R T+ L+ + + LG + Sbjct: 166 AVRQGTP-GLRIGAEDLTMGVRGMIQNTLHLDRARVSDACRLGSPGQGMAVAQQTMNFAR 224 Query: 318 LDSAIMSVSGMRVSLAEAIH-YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L + V M+ A+ +H YA RR + G+L+D P+ ++ I D+ I +AL +L Sbjct: 225 LGIGAVCVGAMK-RCAQLMHRYAARRRIGTGLLLDHPLARQRIGDLRHRIDGLSALIEQL 283 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A FD + E+ ++A I C E M+ +GG GYIE + +R+ Sbjct: 284 AADFDAGRDAPEDGL---LIAKILGSECLSQTS---DELMQMLGGRGYIETNVAPQIFRD 337 Query: 437 SPANSILLGSGNAMVLDVLN-LLEKGTNLF 465 + I G ++ + + LL G +L Sbjct: 338 ARLPRIFEGPTETLLAHLGSRLLNGGDDLL 367 >gi|308478355|ref|XP_003101389.1| hypothetical protein CRE_13526 [Caenorhabditis remanei] gi|308263290|gb|EFP07243.1| hypothetical protein CRE_13526 [Caenorhabditis remanei] Length = 418 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E + G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 158 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFLV E +P G +K+G R + T EL F N + + + G + + Sbjct: 217 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 268 Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ LD + +SG M+ + A YA +R G + +++ +AD+ + Sbjct: 269 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 328 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + + +A + D+ +++ A + + + V +A++ +GG+GYI + Sbjct: 329 ASRSYLYMVAKAADKGTVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 381 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ I G+ L + L K Sbjct: 382 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 414 >gi|184157988|ref|YP_001846327.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|332874447|ref|ZP_08442350.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|183209582|gb|ACC56980.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|332737291|gb|EGJ68215.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 430 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%) Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y + G K + ++D F++ A G+ F+V + G + + +G ++ Sbjct: 223 YFIEGEKTLVILGDLADVFLVSADFNGKPDVFVV----QAGDTISI---KSTPAMGLKAT 275 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 T L+FS+T LG + D+ L++ A+ + ++ A I YA R Sbjct: 276 ETATLKFSHTPALRLGATDFDYTAFLDLGNLMWCAMAVGTCEAVK---AYCIKYANERTA 332 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + IAD+A++I A L A+ + K EA ARI+ C Sbjct: 333 FGEPISHRQSVAFMIADMAIEIDAMRMLILNAASLAEAGKPFHREAYLARIL-------C 385 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 386 AEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRATAIL 424 >gi|170735003|ref|YP_001774117.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821041|gb|ACA95622.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia MC0-3] Length = 617 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 AP++ TE + GTD+ A+ + + IY + G K ++S+ M + + Sbjct: 149 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 208 Query: 244 IMLAQVEG------RVGCFLVPRLLEDGS-----PNGLCYQRLKNKIGNRSNATVELEFS 292 +L +++ + C +VPR D PN + L K+G + A L F Sbjct: 209 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELRPNHVDCIGLPRKMGLKGCANTHLVFG 268 Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342 + T G+LLG NV ++++ ++ A MS V +A A+ YA RR Sbjct: 269 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 323 Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386 H + +++ ++R + D+ + L +LA + EA Sbjct: 324 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 383 Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 ++ A R ++ PI K + A + A++ GG GY + + ++ R+ Sbjct: 384 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 443 Query: 441 SILLGSGNAMVLDVL 455 SI G+ D++ Sbjct: 444 SIWEGTNYIQAQDLV 458 >gi|90417367|ref|ZP_01225292.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] gi|90330809|gb|EAS46078.1| isovaleryl-CoA dehydrogenase [marine gamma proteobacterium HTCC2207] Length = 388 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ K D Y L+G+K W + P + +I+ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLSATKQGDH-YLLNGNKMWITNGPDAHTYIIYAKTDTSAGSKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + N+ G + +L+ Sbjct: 189 TAFIVERDFPGFSRHQKLDKLGMRGSNTCELVFQDC---AVPAENILGGEGCGVAVLMSG 245 Query: 318 LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD +SG V + +A + Y R G + + +M+ IAD+ D+ A+ A Sbjct: 246 LDYERTVLSGGPVGIMQACLDVVLPYIHERSQFGQAIGEFQLMQGKIADMYADLNASRAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D A+ ++AA A I+ + + A + + ++ +GG+GY E R Sbjct: 306 LYAVARACDLAQDSRKDAA-AVIL------FTAEKATQMALQTIQALGGNGYTNEYPAGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + V +L G LF Q Sbjct: 359 LLRDAKLYEI--GAGTSEVRRML----IGRELFNQ 387 >gi|328882615|emb|CCA55854.1| Isovaleryl-CoA dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 386 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 50/315 (15%) Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD 223 L T ++W P++ + E + GLTE G+D + + D Sbjct: 102 LFGTEEQKREWLPRLCAGE-------------LLGAFGLTEPGAGSDAGGTRTTAVRDGD 148 Query: 224 GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQR 274 + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 149 -EWVINGSKCFITNSGTDITGLVTVTAVTGRKPDGRPLISSIIVP----SGTP-GFTVAA 202 Query: 275 LKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 +K+G ++ T EL F + LLG+ + L LD ++++ + Sbjct: 203 PYSKVGWNASDTRELSFDDVRVPVANLLGEEGRGYA-----QFLRILDEGRVAIAALATG 257 Query: 332 LA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 LA E++ YA+ RH G + D ++ IAD+ + A + +R +A SR Sbjct: 258 LAQGCVDESVKYAKERHAFGRPIGDNQAIQFKIADMEMR-AHMARIGWR------DAASR 310 Query: 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A I K + +A EA + GG G++ E +AR +R+S + +G Sbjct: 311 LVRGDTFKKEAAIAKLYSSTVAVDNAREATQIHGGYGFMNEYPVARMWRDS--KILEIGE 368 Query: 447 GNAMVLDVLNLLEKG 461 G + V +L E G Sbjct: 369 GTSEVQRMLIARELG 383 >gi|306845026|ref|ZP_07477607.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1] gi|306274658|gb|EFM56447.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO1] Length = 592 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D+A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDDADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|126278376|ref|XP_001381068.1| PREDICTED: similar to Isovaleryl Coenzyme A dehydrogenase [Monodelphis domestica] Length = 422 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 26/259 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ---VEGRVGC 255 L ++E G+D+ ++ + +K D Y L+G K W + P +D I+ A+ V V Sbjct: 161 LAMSEPSAGSDVVSMRLKAEKKGD-YYILNGTKFWITNGPDADVLIVYAKTDPVAVPVSR 219 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + ++E P ++L +K+G R + T EL F N +LG L+ Sbjct: 220 GITAFIVEKNMPGFSTCKKL-DKLGMRGSNTCELVFENCKVPVSNILGHLSKGV-----Y 273 Query: 313 KILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++ LD + ++G M+ L I Y R G + +M+ +AD+ + Sbjct: 274 VLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLT 333 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + + +A + DE ++ A + A + A V + ++C+GG+GYI + Sbjct: 334 TSRQYVYNVAKACDEGHHSPKDCAGVILYA-------AESATQVALDGIQCLGGNGYIND 386 Query: 428 RSIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 387 FPMGRFLRDAKLYEIGAGT 405 >gi|308452033|ref|XP_003088892.1| CRE-IVD-1 protein [Caenorhabditis remanei] gi|308244474|gb|EFO88426.1| CRE-IVD-1 protein [Caenorhabditis remanei] Length = 418 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E + G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 158 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFLV E +P G +K+G R + T EL F N + + + G + + Sbjct: 217 TCFLV----EKNTP-GFSQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 268 Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ LD + +SG M+ + A YA +R G + +++ +AD+ + Sbjct: 269 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 328 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + + +A + D+ +++ A + + + V +A++ +GG+GYI + Sbjct: 329 ASRSYLYMVAKAADKGTVSNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 381 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ I G+ L + L K Sbjct: 382 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 414 >gi|312199535|ref|YP_004019596.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311230871|gb|ADP83726.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length = 403 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 52/323 (16%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 +M S+ +A + + T ++ +WAP+ + DP A ++E G+D Sbjct: 88 IMGSSLAAAGISSAGTLEQL-VEWAPQCYGDASDPKLGA----------FCVSEPGAGSD 136 Query: 211 IAAITSQGQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRV-----GCFLVPRLL 262 ++++ ++ + + +D + L+G K W + +++ +++A V+ + F++P Sbjct: 137 VSSLRTRARYDEATD-EWVLNGQKAWITNGGIANIHVVVASVDPELKSRGQATFVIP--- 192 Query: 263 EDGSPN--GLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV---------STGP 308 PN GL + K+G R++ T +L F + LLG + G Sbjct: 193 ----PNTPGLVAAKKIKKLGLRASHTADLFFDDVRVPGSCLLGGKDKLDARLAKAREGGH 248 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIA 363 + + +V V +A A + YA+ R G +I+ + A+AD+ Sbjct: 249 SRGQGAMATFERTRPTVGAQAVGIARAAYEYALDYAKTRETFGRPIIENQAIAFALADMK 308 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA L +R A + K+ + ++K ++A AV +A++ +GG+G Sbjct: 309 TEIDAARLLIWRAAWMGKQDKT------FLAGEGSMSKLKAGEVAVAVTEKAVQILGGAG 362 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + R YR+S +I G+ Sbjct: 363 YSREHPVERMYRDSKIYTIFEGT 385 >gi|126698383|ref|YP_001087280.1| putative acyl-CoA dehydrogenase [Clostridium difficile 630] gi|255099918|ref|ZP_05328895.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-63q42] gi|255305807|ref|ZP_05349979.1| putative acyl-CoA dehydrogenase [Clostridium difficile ATCC 43255] gi|115249820|emb|CAJ67637.1| putative acyl-CoA dehydrogenase [Clostridium difficile] Length = 380 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 33/294 (11%) Query: 170 VHKDWAPKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-GI 225 +H +A I F E PM +G LTE G+D A + + Sbjct: 89 IHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTAIIDEETDE 148 Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+S +++ I+ A + G + ++ D G +++ K+G + Sbjct: 149 YVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGS 208 Query: 285 ATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334 T EL F SN G N++ + LD A + V V +AE Sbjct: 209 ETAELIFDNCRVPKSNLLGKEGKGFNIA---------MTCLDGARIGVGAQAVGIAEGAL 259 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +I Y++ R G + ++ IAD+A + +A L + A+ + ++EAA Sbjct: 260 EESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAM 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A KY + A V A++ GG GY+++ + R YR++ I G+ Sbjct: 320 A-------KYNASRTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITEIYEGT 366 >gi|209963716|ref|YP_002296631.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] gi|209957182|gb|ACI97818.1| acyl-CoA dehydrogenase [Rhodospirillum centenum SW] Length = 383 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 22/261 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVE---GRVGC 255 + +TE G+D+ + + ++ Y L+G K F+++ + + I++A+ + G G Sbjct: 127 IAMTEPGTGSDLQGVRTSA-RLDGNQYVLNGSKTFITNGQTANLIIVVAKTDPAAGAKGT 185 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L+ ++E + +G R +KIG + T EL F + LLG G V+ M Sbjct: 186 SLI--VVETDAVDGFRRGRNLDKIGLKGQDTSELFFDDVRVPTSSLLGP-QPGLGFVQLM 242 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + L L A+ +++G+ +A + Y ++R G +ID + +A ++ Sbjct: 243 QQLPQERLIIALEALAGIEAGIAATLDYVKQRKAFGQRIIDFQNTRFTLAQAVTEM---- 298 Query: 371 ALSFRLANSF-DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 R+A +F D+ R + A + K W + A++ + ++ GG GY+ E Sbjct: 299 ----RVARAFCDDCTERHLKGELDAATAAMAKLWLTERQCAILDDCLQLHGGYGYMNEYP 354 Query: 430 IARHYRESPANSILLGSGNAM 450 IAR + ++ I G+ M Sbjct: 355 IARLWADARVGKIYGGTNEIM 375 >gi|254461839|ref|ZP_05075255.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacterales bacterium HTCC2083] gi|206678428|gb|EDZ42915.1| acyl-CoA dehydrogenase protein FadFx [Rhodobacteraceae bacterium HTCC2083] Length = 379 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 30/275 (10%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255 G LTE + G+D + + + + D + ++G K F++S + I++ V + C Sbjct: 120 GFALTEPQAGSDASNLKTSAVRDGDE-WVINGAKQFITSGKNGQMIIIFAVTDKDACKRG 178 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS 305 F+VP +P G R+++K+G T +L F+ N G ++ Sbjct: 179 ISAFIVPT----NTP-GYEVVRVEDKLGLNCTDTCQLAFTDMRVPAENMLGEEGQGYKIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I + M+ S ++V A YA R G + + + +AD+A Sbjct: 234 LANLEGGRIGIAAQAVGMARSALKV----ARDYATERTSFGTAIANHQAVGFRLADMATQ 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AA + A+ + + EA+ A++ A ++A V ++A++ +GG GY+ Sbjct: 290 VEAARQMVLHAASLKEASIPCLNEASMAKLFAS-------EVAEKVCSDAIQTLGGYGYL 342 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + + R YR+ I G+ + L + L++ Sbjct: 343 SDYPVERIYRDVRICQIYEGTSDIQRLVIARNLDQ 377 >gi|126348648|emb|CAJ90373.1| putative acyl-CoA dehydrogenase [Streptomyces ambofaciens ATCC 23877] Length = 390 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+D A++ ++ + D + ++G K W ++D + ++A+ EG G F Sbjct: 133 LSEPASGSDAASLRTRAVRAGDD-WVITGTKAWITHGGVADFYTVMARTGEEGPRGITAF 191 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-L 315 LVP E GL + K+G + + T ++ G + D + I L Sbjct: 192 LVPADAE-----GLSAAVPEKKMGLKGSPTAQIHLD---GVRVSDARRLGDEGQGFAIAL 243 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LDS + ++ + +A EA+ YA R G + D ++ +AD+A I A Sbjct: 244 SALDSGRLGIAACAIGVAQAALDEAVSYAVERRQFGKPIADFQGLRFMLADMATQIEAGR 303 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A D +++AA A K C A V +A++ +GG GY + Sbjct: 304 ALYLTAARLRDAGLPFAKQAAMA-------KLHCTDTAMRVTTDAVQVLGGYGYTADFPA 356 Query: 431 ARHYRESPANSILLGS 446 R+ RE+ I+ G+ Sbjct: 357 ERYMREAKVLQIVEGT 372 >gi|108763787|ref|YP_629060.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622] gi|108467667|gb|ABF92852.1| acyl-CoA dehydrogenase family protein [Myxococcus xanthus DK 1622] Length = 602 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 95/428 (22%), Positives = 163/428 (38%), Gaps = 59/428 (13%) Query: 69 TAQELARMANYNTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVV 128 + + AR Y T + P R +V HP L R + GL + + P V Sbjct: 49 STRRFAREVLYPTYRDMDAQPPSFRDGRVHVHPLMRELYPRLVELGLLTA----TRPPDV 104 Query: 129 RKQ-----AHKIRAARLYLMA-QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSRE 182 Q H + A YLMA L + ++ +A ++ + TP V + ++ E Sbjct: 105 GGQQLPLTVHAVSTA--YLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRGE 162 Query: 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD- 241 + T + LTE + G+ +A + ++ DG + + G K F+S D Sbjct: 163 WTGT-------------MALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDF 209 Query: 242 ----AFIMLAQVEGRVG------CFLVP-RLLEDGS--PNGLCYQRLKNKIGNRSNATVE 288 + LA++EG G F VP R E G+ N + + +KIG + ++ Sbjct: 210 NENVVHLTLARIEGAEGGTRGISLFAVPSRRPEGGTLVDNDVRVAGVIHKIGWKGIPSLA 269 Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR--- 342 L + + G+L+G + M + + V+ V+ EA+ YAR R Sbjct: 270 LNYGESGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAVAYARERPQG 329 Query: 343 ---HVSGGILIDQPVM-----------KRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 V P++ ++AI + L + A + LA + +R Sbjct: 330 RPTGVRDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQR 389 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ P+ K + + A A++ GG GY E R+ NSI G+ Sbjct: 390 AGLLVDLLTPVAKSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTG 449 Query: 449 AMVLDVLN 456 LD+L Sbjct: 450 IQGLDLLG 457 >gi|56459982|ref|YP_155263.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR] gi|56178992|gb|AAV81714.1| Acyl-CoA dehydrogenase [Idiomarina loihiensis L2TR] Length = 389 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 24/257 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P ++ F++ A+ E + Sbjct: 130 LAMSEPNAGSDVVSMKLRAEKKGDK-YILNGNKMWITNGPEANVFVIYAKTEPEKNSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN E +K+L Sbjct: 189 TAFIVEKDTPGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGELN------EGVKVL 242 Query: 316 IY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + + A+++ M+ L + Y R G + + +++ +AD+ AA Sbjct: 243 MSGLDYERAVLAAGPLGIMQACLDTCVPYIHDRKQFGKEIGEFQLIQGKVADMYTRTNAA 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A S D ++ ++AA A + + ++A + +A++ +GG+GYI E Sbjct: 303 RAYVYAVAQSCDRGETTRKDAAGAIL-------YAAELATQLALDAIQLLGGNGYINEYP 355 Query: 430 IARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 356 TGRLLRDAKLYEIGAGT 372 >gi|323137065|ref|ZP_08072145.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] gi|322397826|gb|EFY00348.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] Length = 389 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + ++ D Y L G K W + P +D I+ + + G + Sbjct: 130 LAMSEPGAGSDVTNMRLRARRSGD-EYILDGSKMWVTNGPDADIIIVYGKTDPSAGAHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + + G+ +K+G R + T EL F ++ NV P + +L+ Sbjct: 189 TAFIVERAFKGVSASPKFDKLGMRGSNTCELIFDEC---VVPAENVLGRPERGVNVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD ++G MR L + Y R G + + +M+ +AD+ ++A+ A Sbjct: 246 LDYERAILAGGPLGIMRACLDIVLPYVHERKQFGQPIGEFEIMQGKLADMYTALSASRAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA A + A W + EA++C+GG+GY E R Sbjct: 306 IYAVAKACDRGRTTRKDAAAAILFAAEKATW-------MALEAIQCLGGNGYTNEYPTGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LF++ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFQE 387 >gi|218781156|ref|YP_002432474.1| acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762540|gb|ACL05006.1| Acyl-CoA dehydrogenase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 384 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/263 (20%), Positives = 117/263 (44%), Gaps = 38/263 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVE--GRVGCFL 257 TE G+DI + + + DG + ++G K F+++ ++ F L Q + + Sbjct: 125 FTEPGHGSDITGMDTTA--VLDGDEWVINGTKIFITNGNLAGFFCTLCQTDPDAKPAYRG 182 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM----- 312 + +L + G+ + +K+G R T E+ F D+ V P E++ Sbjct: 183 LSMILVEADREGVSTTSVGDKLGIRMMDTAEVVFK--------DVRV---PKENLIGVEG 231 Query: 313 ----KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++L + D + + ++ + A+ A+ Y ++R G L + + +AD+A Sbjct: 232 KGFYQVLEFFDESRILIAAQALGTAQGALDRAVEYVKQREQFGKKLAQFQITQHKLADMA 291 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A ++++ A ++D+ K + + + K + + A V EA++ +GG G Sbjct: 292 TKVELARLMTYKAAWNYDQGKIDPK-------LTSMAKMFAARTAVEVADEAIQLLGGYG 344 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y+ E + R YR++ I G+ Sbjct: 345 YMREYDVERFYRDAKITEIYEGT 367 >gi|187920336|ref|YP_001889367.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718774|gb|ACD19997.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans PsJN] Length = 377 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255 LTE + G++ + ++ + DG + L+G K F+++ +D I+ A + G+ G Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGSRADLAIVFAVTDPDRGKRGLTA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G + ++K+G R++ T + + + + N+ P E ++I Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L+ + ++ V +A A YA R G L + + +AD+A + AA Sbjct: 236 LSNLEGGRIGIAAQAVGIARAAFDAARLYANERIQFGKALKEHQTIANMLADMATRLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A K EA+ A++ A ++A + + A++ GG GY+E+ + Sbjct: 296 RLLVHHAARLRTAGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|148657081|ref|YP_001277286.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus sp. RS-1] gi|148569191|gb|ABQ91336.1| acyl-CoA dehydrogenase domain protein [Roseiflexus sp. RS-1] Length = 364 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 28/298 (9%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 +LM+P++ + ++ T + + W P+ + P A L E R Sbjct: 89 YLMTPNLFAIPILHFGTEEQKER-WLPRTVEGGFAPYTAA------------LIEPRWSF 135 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268 D A+ + ++ + +Y ++GHK + + + AF++ A+ F++ R E Sbjct: 136 DPHALHTVAEREGN-VYEITGHKALVPLAADAQAFLVYARENDTTQAFIIERGTE----- 189 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVEDMKILIYLDSAIMSVSG 327 GL ++ +G R+ T EL + L G +E + + A ++V Sbjct: 190 GLAVLERESFMGIRALPTYELRLDDVHVPASCRLGGEQGIDIEALMNYSRVALAALAVGV 249 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R + A YA++R G + + +A++A++I AA +++ A D+ + + Sbjct: 250 ARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEIEAARLMTYEAAWHLDKGHNAT 309 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 + A+ A K + +MA V A++ +GG GYI E + R R S LG Sbjct: 310 QSASLA-------KAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFLG 360 >gi|107028398|ref|YP_625493.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116686394|ref|YP_839641.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897562|gb|ABF80520.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116652109|gb|ABK12748.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 617 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AF 243 AP++ TE + GTD+ A+ + + IY + G K ++S+ M + + Sbjct: 149 APLEAYRWDACFCATEPQAGTDLTAVALRATPLERDIYAIDGEKVYISAGMHELTENTLY 208 Query: 244 IMLAQVEG------RVGCFLVPRLLEDG-----SPNGLCYQRLKNKIGNRSNATVELEFS 292 +L +++ + C +VPR D PN + L K+G + A L F Sbjct: 209 FVLGRIDTASPDSFSLSCLVVPRFWPDEETGELQPNHVDCIGLPRKMGLKGCANTHLVFG 268 Query: 293 N---TFGFLLGD-LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRR- 342 + T G+LLG NV ++++ ++ A MS V +A A+ YA RR Sbjct: 269 SNGTTKGWLLGGRRNVGL-----LQLMPLMNQARMSTGMFGVGVASSAYLHAVEYAGRRL 323 Query: 343 -----------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD-----EAKSR 386 H + +++ ++R + D+ + L +LA + EA Sbjct: 324 QGRPIERASNTHAARVAIVEHADVQRMLVDMKSRVDGCRGLLGKLAATATRAAMLEATPD 383 Query: 387 SEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 ++ A R ++ PI K + A + A++ GG GY + + ++ R+ Sbjct: 384 ADPAEIERHRKLQLLLTPICKAFISDQAWRICETAIQVHGGLGYTDASPVEQNARDVKIL 443 Query: 441 SILLGSGNAMVLDVL 455 SI G+ D++ Sbjct: 444 SIWEGTNYIQAQDLV 458 >gi|324997655|ref|ZP_08118767.1| acyl-CoA dehydrogenase domain-containing protein [Pseudonocardia sp. P1] Length = 383 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 35/272 (12%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA------Q 248 ++ +G+ +TE G+D+A++++ + D Y ++G K F+++ ++ +++A Q Sbjct: 121 TLILGIAMTEPGIGSDLASMSTTAVREGDQ-YVVNGSKTFITNGINADLMVVAVKTDPSQ 179 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-- 303 + ++ R +E G R +K+G + T EL F++ LLG Sbjct: 180 KHKGMSLLVLERGME-----GFERGRNLDKLGQHAQDTAELSFTDVRVPVENLLGPDEGQ 234 Query: 304 -----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 V+ P E + I A+ V+ R +L + + Y + R G + K Sbjct: 235 GFTQLVTNLPQERLSI------AVAGVAAARTALTQTLEYVKERKAFGSPIGSFQNSKFV 288 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A++ +I A + + + + +A+ A KYWC ++ V+ + ++ Sbjct: 289 LAELDTEIDIAEHYVDDCVRALNAGELTAVDASKA-------KYWCTELQGRVVDKCLQL 341 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E I++ Y ++ I G+ M Sbjct: 342 HGGYGYMSEYPISKAYADARITRIYGGTTEIM 373 >gi|296140232|ref|YP_003647475.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] gi|296028366|gb|ADG79136.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length = 382 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 111/296 (37%), Gaps = 40/296 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 T + W PK+ S E A+G + +TE G+D+ + ++ K + G Sbjct: 107 TEEQKQAWLPKMASGE--------------AVGAIAMTEPGTGSDLQNVKTRAIK-TGGE 151 Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y ++G K F+++ +D +++ + G + +L + G + NKIG + Sbjct: 152 YVINGSKTFITNGQQADIVVLVCKTNPDEGAAGISLILVEADREGFRKGNILNKIGQKGQ 211 Query: 285 ATVELEFSNTFGFLLGDLNVSTG----------PVEDMKILIYLDSAIMSVSGMRVSLAE 334 T EL F + + L G P E + I VSGM V E Sbjct: 212 DTSELFFDDVHVPVENLLGTQEGQGFYQLMQQLPQERLII------GQACVSGMEVIFEE 265 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 + Y + R G + K +A+ + A D+ + + Sbjct: 266 TLRYTKEREAFGRPIFGFQNTKFKLAEALTETTIARVF-------VDDCIEKHVKGELDI 318 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + K+W A V +E ++ GG GY+ E AR + ++ I G+ M Sbjct: 319 PTVAMAKWWTSDRAQEVASECLQLFGGYGYMAEYPAARFWVDNRVQMIYAGTNEIM 374 >gi|269217380|ref|ZP_06161234.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122] gi|269129517|gb|EEZ60602.1| acyl-CoA dehydrogenase [Slackia exigua ATCC 700122] Length = 398 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 31/266 (11%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLA-- 247 Q SV I LTE+ GGT A I + K +DG Y L+G KW +S + SD ++A Sbjct: 117 FQDKSVYINFALTEQTGGTG-ADIHTTAIKQADGTYLLNGEKWLISHTDCSDYTYVIAVT 175 Query: 248 ----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 + + R+ F+VP + +P G + + +G R L+F+N +LLG Sbjct: 176 DESKEKDDRLSAFVVP----NDAP-GFEIVPMSHMMGCRGAGHAGLKFTNVKLDPKYLLG 230 Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 + ++ + ++ I + M+ + +SL A R G + + ++K Sbjct: 231 VEGQGMEIAIHSLSVSRVHIACSNLGMAQRMLEISLKR----ANDRVTFGKPIATRQMIK 286 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + IA++ I + A +D + Y A I K + V E + Sbjct: 287 QKIAEMQKMIHVLRTAIYDFARDYDINPTNE----YVTEKAAICKLFSIDTVKLVSDEML 342 Query: 417 ECIGGSGYIEERSIA---RHYRESPA 439 E GG GY E+ R YR+ A Sbjct: 343 EIFGGDGYFEDSPYGPTERLYRDCRA 368 >gi|260554057|ref|ZP_05826320.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] gi|260404796|gb|EEW98303.1| acyl-CoA dehydrogenase domain-containing protein [Acinetobacter sp. RUH2624] Length = 385 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ +I A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEIEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A ++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|39934684|ref|NP_946960.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39648534|emb|CAE27055.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 390 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ ++ K D + L+G+K W + P+++ ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKTRADKKGD-RFVLNGNKMWITNGPIAETLVVYAKTDPNAGPRGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + +NV ++ Sbjct: 190 TAFLIEKGFKGFSTAQKLDKLGMRGSDTGELLFEDCEVPEENVLGEVGRGVNVLMSGLDY 249 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + ++ A V M+ + + Y R G + +++ +AD+ + + A+ A Sbjct: 250 ERAVL----AAGPVGIMQACMDVVLPYVHERKQFGEPIGTFQLVQGKVADMYVTMNASRA 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A + D ++ E+AA A + A C +A++ +GG+GYI + Sbjct: 306 YVYAVAKACDRGETTREDAAGAILYAAERATQCA-------LDAIQLLGGNGYINDYPTG 358 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 359 RLLRDAKLYEIGAGT 373 >gi|313214052|emb|CBY42609.1| unnamed protein product [Oikopleura dioica] Length = 286 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/283 (22%), Positives = 126/283 (44%), Gaps = 35/283 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253 LG++E G+D+A I + + D Y ++G K W + +D +LA +G V Sbjct: 22 LGVSEVHAGSDVAQIKTTAKSDGDD-YIINGQKMWITNGIQADWCCLLANTSDGPVHKSK 80 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 VP L G+ + KIG S+ T +L F + +++G+ +G + Sbjct: 81 SLICVPMDLP-----GVIRAKKIEKIGMWSSDTAQLWFEDVRVPKKYIIGE--EGSGFIY 133 Query: 311 DM-----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M + + + SAI SG+ + E I+Y R R G ++D + +A++ + Sbjct: 134 QMIQFQQERIFAMASAI---SGLENCINETINYTRERQAFGKSVLDNQYIHFQLAELQTE 190 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AL +R+ + + ++ A+ ++ ++ V + ++ GG GY Sbjct: 191 VELLRALLYRVTAMYVNGEDATKLASMGKLKTG-------RLIREVADKCLQMWGGMGYT 243 Query: 426 EERSIARHYRESPANSILLGSGNAM---VLDVLNLLEKGTNLF 465 E +++ +R+ S+ G+ M + ++++L KGT L Sbjct: 244 LENPVSQQFRDGRLASVGGGADEIMLQIICKLMDILPKGTKLI 286 >gi|307324572|ref|ZP_07603779.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] gi|306889816|gb|EFN20795.1| acyl-CoA dehydrogenase domain protein [Streptomyces violaceusniger Tu 4113] Length = 385 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251 + +TE G+D+A + + + DG Y L+G K F++ ++D ++ A+ + Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVCARTAPATPEDR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G + L+ D G R K+G +++ T EL F+ D+ V PVED Sbjct: 184 RSGISI---LVVDTKSEGYAVGRKLEKLGLKTSDTAELSFT--------DVKV---PVED 229 Query: 312 M-----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + K YL + + + ++ A Y R R V G + K Sbjct: 230 LLGEEGKAFGYLTHNLPQERLGIAVGAYAQAAAAVRFATEYVRDRTVFGQAVASFQNTKF 289 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD ++ A A+ R ++ D + + +AA A++ + + A VI + ++ Sbjct: 290 VLADCQSEVDAMQAVVDRALDAHDADELTAADAASAKL-------FTTERAAVVIDKCLQ 342 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 343 LHGGYGYMMEYPIARLYADTRVNRIYGGTSEVM 375 >gi|313675289|ref|YP_004053285.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] gi|312941987|gb|ADR21177.1| acyl-CoA dehydrogenase domain-containing protein [Marivirga tractuosa DSM 4126] Length = 395 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 23/241 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ + +T+ + D Y L+G K W +SP D ++ A+ EGR+ + Sbjct: 139 FGLTEPDHGSNPSGMTTNFKDKGDH-YLLNGAKMWISNSPKCDVAVVWAKNEEGRIHGLI 197 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 V R +E G K R++ T EL F N L +G MK L Sbjct: 198 VERGME-----GFTTPETHGKWSLRASTTGELVFDNVKVPKENLLEGKSGLGAPMKCL-- 250 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372 DSA ++ + A + + RR+ I +P+ ++ ++++ +I + L Sbjct: 251 -DSARFGIAWGAIGAAMDCYDSARRYSLERIQFGKPIASFQLTQKKLSEMLTEITKSQLL 309 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++RLA DE K+ + + + A+ A ++A + EA + GG G + + R Sbjct: 310 NYRLAQLMDEGKASTPQISMAKRNA-------VEIALNIAREARQIHGGMGITGDYPMMR 362 Query: 433 H 433 H Sbjct: 363 H 363 >gi|156741097|ref|YP_001431226.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232425|gb|ABU57208.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 388 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR- 260 LTE G+D A I + + D G W + +D ++ A + +G PR Sbjct: 125 LTEPNAGSDAAHIRTTAVRDGDSWVLNGGKMWITNGSFADVIVVFANTDPSLG----PRG 180 Query: 261 ----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++E G P G +++ K+G R++ T + F + +LG+ V G ++ Sbjct: 181 ITAFIVEKGFP-GFKVGKVEPKMGLRASHTASIFFEDCRVPAANVLGE--VGRGYALALQ 237 Query: 314 IL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L +A + + L ++ YA R G + D ++ +AD+A+ I Sbjct: 238 TLDIGRCGLGAACLGAAKEAYEL--SLKYAVERQQFGRPIADFQAIQFKLADMAVKIYTM 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + A D ++ AR+ + I K +C ++ EA++ GG G+ E Sbjct: 296 EQIVYDCAKKVDRGET-------ARLESSIVKLYCTDALAWILDEAIQIHGGMGFSRELP 348 Query: 430 IARHYRESPANSILLGS 446 + R YR++ I G+ Sbjct: 349 LERMYRDARVFRIYEGT 365 >gi|319764366|ref|YP_004128303.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317118927|gb|ADV01416.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 399 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 24/257 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P IG L+E G+D+AA++ + + DG Y L+G K W + ++D + + A Sbjct: 128 PAVARGTKIGAFALSEPDAGSDVAALSCRAEADGDG-YVLNGSKTWISNGGLADFYCVFA 186 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVST 306 + + G + + D GL + I A++ E +LG Sbjct: 187 RTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLASLHFENCRVPRSCMLGP----- 241 Query: 307 GPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 P + K+ + A ++ R ++ E + +A RR + G L D + + A Sbjct: 242 -PDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQTLADFQLTQAAFG 300 Query: 361 DIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 D+A I + L++R A D + ++ + E A A++ A + A VI A++ Sbjct: 301 DMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TESAQQVIDRALQMF 353 Query: 420 GGSGYIEERSIARHYRE 436 GG G + R YR+ Sbjct: 354 GGKGVTVGNPLERLYRD 370 >gi|289640901|ref|ZP_06473071.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] gi|289509216|gb|EFD30145.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] Length = 378 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 25/273 (9%) Query: 182 EYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MS 240 +Y P A K SV+I TE G+D AA+ ++ +D + L+G+K F S + Sbjct: 109 QYLPGFLAGRTKFSVSI----TEPGAGSDAAAVQTRAVLDNDH-WVLNGNKVFCSGAHLP 163 Query: 241 DAFI-MLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-- 295 D I +LA+ E G L+ L+ + +P G+ ++L N I RS T E+ F++ Sbjct: 164 DTVITVLARTSPERHRGLSLI--LVPNTAP-GVDIRKL-NTIVRRSLGTTEIFFTDVHVP 219 Query: 296 -GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 G L+G++N G + + L A V R +L + + Y R R G L V Sbjct: 220 AGNLIGEVNNGWGYIGEHLEYERLSLAASYVGNARTALDDTVTYTRNRTQFGRPLSSFQV 279 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 +K +A+ ++ AA L + A + +E + A++ A +A Sbjct: 280 LKHRMAENECEVEAARLLVYNAATKMARGERALKEVSMAKVFA-------ADVAFRTSFN 332 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSG 447 M+ +GG + E + R++RE A ++G G Sbjct: 333 GMQALGGYAQLPEFDMERYFRE--AKHAMVGGG 363 >gi|254509713|ref|ZP_05121780.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221533424|gb|EEE36412.1| isovaleryl-CoA dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 387 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 32/269 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G+K W + P +D ++ A+ + G + Sbjct: 128 LAMSEPSAGSDVVSMKLRAEKRNDH-YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKEMKGFSTSPHFDKLGMRGSNTAELIFEDVEVPFENVLGEEGRGVAVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEVMPYLAERKQFGKPIGSFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQALGGAGFLS 350 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVL 455 + ++R +R+ A + +G+G + + +L Sbjct: 351 DAPVSRIFRD--AKLMEIGAGTSEIRRML 377 >gi|324998480|ref|ZP_08119592.1| acyl-CoA dehydrogenase [Pseudonocardia sp. P1] Length = 382 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 26/300 (8%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP +H+ S E P + +TE G+D+A + ++ + D Sbjct: 94 MATPSLHR-----FGSEELKQRYLVPAIAGEAVCSIAVTEPDAGSDVAGLRTRADRDGDD 148 Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 + ++G K ++++ + +D +LA+ G +++ G R +K+G R Sbjct: 149 -WVINGSKLYITNGVQADWICLLARTSDEPGARGFSQIVVPSGLPGYAVSRKLDKLGMRC 207 Query: 284 NATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 + T EL F+ NT G + ++ + + +A V G+ +L Sbjct: 208 SDTAELTFTDLRVPVANTIGEIGRGFQQQMTQFQNER----MSAAYDRVGGLEQALDRTR 263 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y + R G LID + +A++ + ++ A EA R E+ + Sbjct: 264 DYLKTRRAFGHPLIDNQYLAFQLAELYARLDMVRHYNYACA----EAHVRGEDTSQ---F 316 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN 456 A + K +++ V ++ GG GY+EE AR R+ SI G + ++L VL Sbjct: 317 ATVAKLAVGRLSRDVAQTCLQYHGGMGYMEETWTARFLRDMTLTSI-GGGADEVMLQVLT 375 >gi|317125991|ref|YP_004100103.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] gi|315590079|gb|ADU49376.1| acyl-CoA dehydrogenase domain-containing protein [Intrasporangium calvum DSM 43043] Length = 382 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 24/255 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVG--CF 256 L+E G+DIA++T++ DG Y L G K W + +D + A+ G G F Sbjct: 127 LSEPLAGSDIASMTTRATPTGDGSYSLKGTKAWISHAGHADYYTTFARTADTGSKGLSTF 186 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP L + + K+G + ++ F + G + M L Sbjct: 187 VVPADAAG-----LAFAAPERKMGLHGDPVAQVMFDGVV--VDGARRIGEEGQGMMMALS 239 Query: 317 YLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LDS + ++ + +L +A YA RH G + + +AD+ + +A A Sbjct: 240 ALDSGRLGIAAGATGLAQAALDQAATYANERHQFGRPIASNQGLAFLLADMEAAVTSARA 299 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 A D + S+EAA A+++A A V +A++ +GG+GY E+ + Sbjct: 300 TYLHAARLKDAGRPFSKEAAVAKLVA-------TDAAMKVTTDAVQVLGGAGYTEDFPLE 352 Query: 432 RHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 353 RYLREAKVTQIFEGT 367 >gi|221200448|ref|ZP_03573490.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M] gi|221206128|ref|ZP_03579142.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221174140|gb|EEE06573.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2] gi|221179789|gb|EEE12194.1| acyl-CoA dehydrogenase [Burkholderia multivorans CGD2M] Length = 411 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 159 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 217 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G + + K+G R++ T + N LLG+ L ++ Sbjct: 218 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 272 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G L + +++ +AD+A+ I A Sbjct: 273 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 328 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A K + +MA V ++A++ GG GY+ + Sbjct: 329 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 381 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 382 EVERHYRDARITQIYEGT 399 >gi|225387070|ref|ZP_03756834.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme DSM 15981] gi|225046814|gb|EEG57060.1| hypothetical protein CLOSTASPAR_00820 [Clostridium asparagiforme DSM 15981] Length = 388 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 42/307 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-I 225 TP K + P P+ I LTE G+D ++ + DG Sbjct: 110 TPEQKKKYIP-------------PLASGEKKIVFALTEPGAGSDAGGTLTRA--VKDGEY 154 Query: 226 YCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y LSG K F+S +P++D ++ A+ + G + + D G+ + + K+G Sbjct: 155 YILSGRKCFISGAPLADYAVIYAKTNPALKGSKGISMFIVDMKLPGVSLGKPELKMGING 214 Query: 284 NATVELEFSNTF---GFLLG--DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA----- 333 T ++ N LLG D ST L LD + V+ + +A Sbjct: 215 YPTSDIILENVRVHESDLLGPPDKGFSTA-------LKTLDGGRLGVAAQSLGIAQCCLE 267 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E+I YA+ R G + + IAD+A +I AA + + A + D + A Sbjct: 268 ESIRYAKERRQFGRPIAKFQAISFMIADMATEIEAAREMIYSTALAKDAGEKD------A 321 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLD 453 + + K + +MA V +A++ GG GY+ + + R YR++ +I G+ + Sbjct: 322 PMKCSMCKLFASEMANRVAYKAVQIHGGYGYMRDYKVERMYRDARITTIYEGTSQVQQMV 381 Query: 454 VL-NLLE 459 + NLL+ Sbjct: 382 IAGNLLK 388 >gi|209546464|ref|YP_002278382.1| acyl-CoA dehydrogenase domain-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537708|gb|ACI57642.1| acyl-CoA dehydrogenase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 375 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 30/263 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRVG 254 G LTE + G+D + + ++ ++ D Y + G K F++S + I++ V G+ G Sbjct: 120 GFALTEPQAGSDASNLKTRARRDGDH-YVIDGAKQFITSGKNGNVIIVFAVTDPDAGKKG 178 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVS 305 F+VP G R++ K+G S T ++ F+ LG ++ Sbjct: 179 ITAFIVPT-----DTPGYEVIRVEEKLGLHSTDTCQIAFNAMRIPVALRLGAEGEGYRIA 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +E +I I A +V R + A YA+ R G + + + +AD+A+ Sbjct: 234 LANLEGGRIGI----AAQAVGMARAAFEAARDYAKERTAFGKPIFEHQAVAFRLADMAVR 289 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L F A + +EA+ A++ A +MA V ++A++ GG GY+ Sbjct: 290 IEAARQLVFHAAALREAELPCLQEASMAKLFA-------SEMAERVCSDAIQIHGGYGYM 342 Query: 426 EERSIARHYRESPANSILLGSGN 448 + + R YR+ I G+ + Sbjct: 343 ADYPVERIYRDVRICQIYEGTSD 365 >gi|146343861|ref|YP_001208909.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] gi|146196667|emb|CAL80694.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS278] Length = 398 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 41/263 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255 L+EK G+D+AA+ ++ D Y L G K W + ++D + + A+ G Sbjct: 137 LSEKEAGSDVAAMACSARRDGDD-YVLDGEKTWISNGGIADVYTLFARTGEAPGARGISA 195 Query: 256 ---------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST 306 F V +E +P+ L RL+N + S G G ++ Sbjct: 196 FVVYPDDSGFSVAERIEVIAPHPLATLRLEN---------CRIPVSRRLGAPGGGFKLA- 245 Query: 307 GPVEDMKIL-IYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 M+ L I+ S + G R +L EA +A+ R + GG L D + + A ++A Sbjct: 246 -----MQTLDIFRASVAAAALGFGRRALDEAQAHAQSRQMFGGALADLQMTQAAFGEMAT 300 Query: 365 DIAAATALSFRLANSFDEAK-SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 D AA L++R A D K + EAA A++ A T A VI A++ GG G Sbjct: 301 DTDAAALLTYRAAWRRDVQKLPTTREAAMAKLTATET-------AQRVIDRALQMFGGRG 353 Query: 424 YIEERSIARHYRESPANSILLGS 446 + + YRE A I G+ Sbjct: 354 VRKGEIVEGLYREIRALRIYEGA 376 >gi|84516103|ref|ZP_01003463.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53] gi|84509799|gb|EAQ06256.1| putative acyl-CoA dehydrogenase [Loktanella vestfoldensis SKA53] Length = 402 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D +A+ + +K + G Y +SG K W +SP++D F++ A+ E G++ Sbjct: 144 FGLTEPDAGSDPSAMKTTAKKTATG-YMISGAKMWISNSPIADVFVVWAKSEAHGGKIRG 202 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ K+ R++ T E+ LL ++ GP Sbjct: 203 FVLEKGMK-----GLSAPKVGGKLSLRASITGEIVMDGVEVGEDALLPNVEGLKGP---- 253 Query: 313 KILIYLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE +H AR+ R G L + + +A++ +I+ Sbjct: 254 --FGCLNRARYGISWGVLGAAEFCMHAARQYGLDRKQFGKPLAQTQLQQVKLANMLTEIS 311 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DEA++ E M I K C A + + + GG+G EE Sbjct: 312 LGLQASLRVGRLLDEAQAAPE-------MISIIKRNNCGKALDIARMSRDMHGGNGISEE 364 Query: 428 RSIARH 433 I RH Sbjct: 365 YQIMRH 370 >gi|262203693|ref|YP_003274901.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087040|gb|ACY23008.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length = 386 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 20/263 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D Y ++G K +++S + F++ A G G V Sbjct: 128 LAITEPDGGSDVGHLRTSAVRDGDH-YVVNGAKTYITSAVRADFVVTAVRTGGPGAGGVS 186 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L+ D G R K+G RS+ T EL F + L+G N + + Sbjct: 187 LLVIDKDTPGFTVTRRLEKMGWRSSDTAELSFVDARVPVTNLVGAQNSGFAQIAAAFVTE 246 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA--LDIAAA--TAL 372 A+ + + + L + + R R G LI + ++ ++ ++A +DIA A+ Sbjct: 247 RSGLAVQAYASAQRCLDLTLAWVRDRQTFGKPLIARQSVQDSLTEMARRIDIARTYTRAV 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 R S D+ + E +A+ A T W V +A++ GG GY+ + R Sbjct: 307 VERKVTSGDDLIA---EVCFAKNTAVETGEW-------VADKAVQLFGGLGYMTGTEVER 356 Query: 433 HYRESPANSILLGSGNAMVLDVL 455 YR+ I +G G +L L Sbjct: 357 QYRD--MRIIGIGGGTTEILSGL 377 >gi|255530052|ref|YP_003090424.1| acyl-CoA dehydrogenase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343036|gb|ACU02362.1| acyl-CoA dehydrogenase domain protein [Pedobacter heparinus DSM 2366] Length = 379 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 40/263 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----VGC 255 L+E G+D + + + D Y L+G K W + + ++++AQ + + Sbjct: 125 LSEPEAGSDATSQQTTAEDKGDH-YLLNGTKNWITNGGTASTYLVIAQTDKSLRHKGINA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS------------NTFGFLLGDLN 303 F+V + +E G +NK+G R + T L F+ N FGF Sbjct: 184 FIVEKGME-----GFTVGPKENKMGIRGSDTHSLMFNDVKVPKENRIGENGFGFKFAMKT 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + G I + + + ++ LA + YA++R G + + + +AD+A Sbjct: 239 LEGGR-------IGIAAQALGIAAGAYELA--LDYAKQRKAFGKPIAEHQAIAFKLADMA 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I AA L ++ A D+ + + + + K + K+A V EA++ GG G Sbjct: 290 THIEAARLLVYKAAWLKDQGQPYT-------LAGSMAKLYASKVAMEVTVEAVQIHGGYG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 +++E + R R++ I G+ Sbjct: 343 FVKEYHVERLMRDAKITQIYEGT 365 >gi|254382188|ref|ZP_04997549.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] gi|194341094|gb|EDX22060.1| acyl-CoA dehydrogenase [Streptomyces sp. Mg1] Length = 401 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 45/280 (16%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+ K D Y L+G K +L++ S + + EG + Sbjct: 135 GSDVSAITSKAVKDGDE-YVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L + P GL +K+G + T EL ++ L + V + Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPANRVLGGQTG 245 Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363 + V RV++A + YA++RH G + + ++ +A++A Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMA 305 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA A+ A D + EA A KY + V+ +A GG G Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 + +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|156546419|ref|XP_001607123.1| PREDICTED: similar to acyl-coa dehydrogenase [Nasonia vitripennis] Length = 423 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 34/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + Sbjct: 162 LAMSEPGAGSDVVSMKLKAEKKGD-YYLLNGNKFWITNGPDADTLVVYARTDPNAAKKQH 220 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 + F++ + +E G + +K+G R + T EL F N +LG N Sbjct: 221 GITTFIIEKGME-----GFSTAQKLDKLGMRGSNTCELIFENCKVPAANVLGQENKGV-- 273 Query: 309 VEDMKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 +L LD + ++G M+ + + YA+ R G + + +++ IAD+ Sbjct: 274 ---YVLLSGLDLERLVLAGGPLGIMQAACDVSFEYAQTRKQFGKNIAEFQLIQGKIADMY 330 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + ++ + + +A + D ++ A A I+ +C + A +A++ +GG+G Sbjct: 331 TRLCSSRSYLYSVARACDNGHVNGKDCA-AVIL------YCAENATKTALDAIQILGGNG 383 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI + S R R++ I G+ Sbjct: 384 YINDYSTGRLLRDAKLYEIGAGT 406 >gi|167034658|ref|YP_001669889.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida GB-1] gi|166861146|gb|ABY99553.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida GB-1] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G +K+G R + T EL F N G L G + V Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVQVPAENILGQLNGGVRV------- 239 Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD + +SG M+ + + Y R G + + +++ IAD+ + Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +A + D ++ ++AA + + + A + EA++ +GG+GYI Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350 Query: 427 ERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370 >gi|161520205|ref|YP_001583632.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189353617|ref|YP_001949244.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] gi|160344255|gb|ABX17340.1| acyl-CoA dehydrogenase domain protein [Burkholderia multivorans ATCC 17616] gi|189337639|dbj|BAG46708.1| putative acyl-CoA dehydrogenase family protein [Burkholderia multivorans ATCC 17616] Length = 377 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEANNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G + + K+G R++ T + N LLG+ L ++ Sbjct: 184 FLVPT-----DTPGFIIGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G L + +++ +AD+A+ I A Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMAVQINA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A K + +MA V ++A++ GG GY+ + Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQA-------KLYASEMAERVCSDAIQIHGGYGYLVDY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 EVERHYRDARITQIYEGT 365 >gi|70732407|ref|YP_262163.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] gi|68346706|gb|AAY94312.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] Length = 378 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGYLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 L + G + K+G ++ T EL F + F +L+ +L Sbjct: 182 TSLFLVEADTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + AI ++ +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------AIGGLASAEAALQWTLEYTRERKAFGKAIADFQNSRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA A KYW + V+ E ++ GG G Sbjct: 291 TEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E +AR + ++ I G+ M Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370 >gi|77460917|ref|YP_350424.1| Acyl-CoA dehydrogenase-like [Pseudomonas fluorescens Pf0-1] gi|77384920|gb|ABA76433.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1] Length = 378 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 L + + G + +K+G ++ T EL F + F +L+ +L Sbjct: 182 TSLFLVEANTPGFDKGKRLDKVGMKAQDTSELFFQDVRVPKENLLGQAGAGFAYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + AI ++ +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------AIGGLASAEAALQWTLDYTRERKAFGKSIADFQNTRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA A KYW + V+ E ++ GG G Sbjct: 291 TEIQIGRVFVDRCLELHLQGKLDVPTAAMA-------KYWGTDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E +AR + ++ I G+ M Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370 >gi|83748604|ref|ZP_00945623.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|207743137|ref|YP_002259529.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83724728|gb|EAP71887.1| Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|206594534|emb|CAQ61461.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 622 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/320 (21%), Positives = 129/320 (40%), Gaps = 71/320 (22%) Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252 L+E + G+ ++ I + +G+ Y L+G+K ++S+ +SD + +LA++ G Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223 Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291 G F+VP+ L + G N + L +K+G R L F Sbjct: 224 DGKPIPGAKGISLFIVPKFLVNADRSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283 Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335 + G+L+G+ P + + + ++ + GM ++ A Sbjct: 284 RPLGPDGQPRAGAIGYLVGE------PHKGLACMFFMMNEARIGVGMGATMLGYTGYLHA 337 Query: 336 IHYARRRHVSGGI-------------LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + YAR R + ++D ++R + + A L+ A DE Sbjct: 338 LDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397 Query: 383 AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ ++ A AR I+ PI K W + + A++ GG GY E ++ + YR+ Sbjct: 398 ARGETDPAVRARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRD 457 Query: 437 SPANSILLGSGNAMVLDVLN 456 + N I G+ LD+L Sbjct: 458 NRLNPIHEGTHGIHGLDLLG 477 >gi|328781352|ref|XP_395491.4| PREDICTED: very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Apis mellifera] Length = 594 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 68/332 (20%), Positives = 142/332 (42%), Gaps = 49/332 (14%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + L TP K + P++ + +Y LTE G+D +I S+ K Sbjct: 132 ILLYGTPEQKKKYLPRVCNGDY--------------AAFCLTEPSSGSDAGSIRSRAIKS 177 Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQV----------EGRVGCFLVPRLLEDGSPNG 269 +DG Y L+G+K W + +++ + AQV + ++ F+V R S G Sbjct: 178 ADGSHYILNGNKIWISNGGLAEIMTVFAQVPVQDLETGKIKDKITAFIVER-----SFGG 232 Query: 270 LCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSG- 327 + + K+G + + T E+ F N + N+ G + + + L++ ++ Sbjct: 233 VISGPPEKKMGIKCSNTTEVHFENV---KIPAENIIKGEGQGFSVAMNVLNNGRFGMAAA 289 Query: 328 ----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE- 382 MR + +A+ +A +R G + ++ + +A+ +L++ +A + D Sbjct: 290 LSGTMRYCIKKAVEHATQRVQFGHTIDYYGSIQEKLGRMAMLHYVTESLAYSIAGNMDNG 349 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 ++ EAA ++ A +W C E ++ +GG Y+++ + R R+ I Sbjct: 350 SQDYYLEAAISKCFASEAAWWVCD-------ETIQILGGMAYMKDTGLERVMRDLRIFRI 402 Query: 443 LLGSGNAM-VLDVLNLLEKGTNLFEQLFSTLE 473 G+ + + + VL+ L+ +QL S ++ Sbjct: 403 FEGTNDILRIFIVLSGLQHAGIHLQQLMSAIK 434 >gi|284043053|ref|YP_003393393.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283947274|gb|ADB50018.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 396 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR--VGCFL 257 +G+TE G+D+A I ++ + D Y ++G K ++++ +I+L G G Sbjct: 139 IGITEPDAGSDVAGIKTRAVRDGDD-YVINGSKTYITNGHRADYIVLMTKTGDNDSGYDG 197 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 + D G+ ++ K+G ++ T L F + +LG+ V G M Sbjct: 198 FTVFIVDMDLPGVIREKRLEKLGMHASDTALLAFQDVRVPADAVLGE--VGKGFYHIMWE 255 Query: 315 LI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 L L A VSG +++ + + YA R G + V + A++A I +A + Sbjct: 256 LQGERLIGAAGCVSGAQLAFDKTLEYALERTAFGRQIGKFQVTRHKFAEMATKIESARQM 315 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A F+ + E + A++ A ++A V E ++ GG+GY++E I R Sbjct: 316 VYTTAWRFNNGEYPVREISMAKLHA-------ARIAVEVADECIQIHGGAGYMKEYGIER 368 Query: 433 HYRESPANSILLGSGNAMVLDVLN 456 +R+ N I G+ + ++LDV+ Sbjct: 369 VWRDMRLNRIGAGT-DEIMLDVIG 391 >gi|320007286|gb|ADW02136.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 31/263 (11%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----R 252 + + ++E G+D+AA+ ++ DG + ++GHK W ++ +++ +++A+ + R Sbjct: 128 LSIAMSEPEAGSDVAALRCAAERTPDGGWLVNGHKTWISNAHLAEHILLVARTDASGTKR 187 Query: 253 VGC--FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 G F VP G+P G+ + ++ G N ++ F+ L D V Sbjct: 188 EGLTMFHVP----AGTP-GIRIRPIETMGGREVN---DVYFTEV--RLPADAVVGVADHA 237 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +++ LD+ + ++ + LAE + Y R R G + ++ +AD+A + Sbjct: 238 WPQLMAGLDAERLFLAANMLGLAERVLEDTVAYVRGREQFGRPVGSFQALRHRLADLATE 297 Query: 366 IAAATALSFRLANSFDEAKSR--SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A L F +A + D R S EA+ A++ A T A E M+ +GG G Sbjct: 298 IECARLLVFDVAAACDAEPGRRFSREASMAKLKATET-------ARNAALEGMQMMGGYG 350 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y E + RH R + +++ G+ Sbjct: 351 YATEYDMERHLRAAVVSTVYGGT 373 >gi|119370276|gb|ABL68070.1| butyryl-CoA dehydrogenase [Roseburia intestinalis L1-82] Length = 352 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 27/242 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEG 251 LTE GTD A +Q + + DG + L+G K F+++ ++D +I++A G Sbjct: 123 FALTEPGAGTD--AQGAQTKAVLDGDEWVLNGSKCFITNGKVADVYIVIAITSITEDKRG 180 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R +++ G+P G + + K+G R ++T EL F + + N+ + Sbjct: 181 RKKKNFSAFIVDKGAP-GFSFGTKEKKMGIRGSSTYELIFEDC---RIPKENLLGPEGKG 236 Query: 312 MKILIY-LDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 I ++ LD + ++ + +AE AI Y + R G + Q + +AD+A Sbjct: 237 FPIAMHTLDGGRIGIAAQALGIAEGALDRAIAYTKERKQFGRSIAQQQNTQFKLADMAAR 296 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I AA L ++ A + K S EAA A++ A T A AV E ++ GG+G+ Sbjct: 297 IEAAQLLVYKAAMAKATQKVYSVEAAKAKLFAAET-------AMAVTTEVVQLFGGNGFT 349 Query: 426 EE 427 ++ Sbjct: 350 KD 351 >gi|57529797|ref|NP_001006511.1| long-chain specific acyl-CoA dehydrogenase, mitochondrial [Gallus gallus] gi|53133742|emb|CAG32200.1| hypothetical protein RCJMB04_19o8 [Gallus gallus] Length = 431 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 38/269 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV--EGRVGC 255 + +TE G+D+ + + +K DG + L+G K F+++ M D I++ E R Sbjct: 171 IAMTEPGAGSDLQGVRTYAKK--DGSDWILNGSKTFITNGWMCDVVIVVTVTNREARSPA 228 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGD 301 + L + G R NKIG ++ T EL F + F +L+ + Sbjct: 229 HGISLFLVENGTKGFNKGRKLNKIGLKAQDTAELFFEDVRLPASALLGKENKGFYYLMAE 288 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 L P E L+ D A+ S M E Y R+R G + ++ +A+ Sbjct: 289 L-----PQER---LVIADLALASCEFM---FEETRDYVRQRKAFGKTVAHLQTVQHKLAE 337 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + +I A D E A + KYW + +V + ++ GG Sbjct: 338 MKTNICVGRAF-------LDNCLQLHSEKRLDSPTASMAKYWASDLQNSVATQCVQLHGG 390 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 SGY+ E IA+ + ++ I G+ M Sbjct: 391 SGYMWEYPIAKAFVDARVQPIYGGTNEIM 419 >gi|325123534|gb|ADY83057.1| putative acyl-CoA dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length = 385 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A ++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|300784385|ref|YP_003764676.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793899|gb|ADJ44274.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length = 383 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 28/285 (9%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 ++W PK+ S E + + +TE G+D+ I ++ + D Y L+G Sbjct: 113 REWLPKLASGE-------------MVGAIAMTEPGTGSDLQGIKTRAVRDGDH-YVLNGA 158 Query: 232 KWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K F+++ + +D ++ + + G V ++ + G R+ +K+G + T EL Sbjct: 159 KTFITNGLHADLVVVACKTDPDAGAQGVSLIVVETDTPGFRRGRVLDKVGLKGQDTAELF 218 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVS 345 F + G LLGD G ++ M L L A+ +V+G+ ++ + Y + R Sbjct: 219 FDDVRVPAGNLLGDAE-GQGFIQLMLQLPQERLIIAVTAVAGLEAAVDLTLEYTKERTAF 277 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC 405 G +P+ + + +A A + D+ R + A + K W Sbjct: 278 G-----RPIF--SFQNTKFKLAEAATEAAVARAFLDQCIERHLKGELDVQGAAMAKLWTT 330 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + VI + ++ GG GY+ E IAR + + + I G+ M Sbjct: 331 ERVNKVIDDCVQLFGGYGYMTEYPIARAWADVRISRIFGGTSEIM 375 >gi|15805946|ref|NP_294646.1| acyl-CoA dehydrogenase [Deinococcus radiodurans R1] gi|6458645|gb|AAF10499.1|AE001945_3 acyl-CoA dehydrogenase [Deinococcus radiodurans R1] Length = 381 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 17/245 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256 G +TE G+D I ++ K D +Y L+G K ++S +P++ ++A + G Sbjct: 122 GFAITEPSSGSDAGNIRTKAVKKGD-VYVLNGTKHYISNAPIAGLLTVIAITDPAQGSRG 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + L+E S G+ ++ K+G + + E+ F + LLG N G E + Sbjct: 181 MSAFLVEPQSTPGVSIGKIDEKMGQKGALSAEVIFEDAEIPAANLLGPEN--RGYREALG 238 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 IL + A S M+ L ++ +A+ R G + + ++ +A++ + I + Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAQTREQFGKPIAEFQAVQFMLAEMEVAIQTSRV 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++A D+ + + MA + KY +M V +A++ GG GY+++ Sbjct: 299 LWQKVAWMVDQGQD-------VKRMASVAKYHATEMLSQVADKAVQVAGGMGYVKDAPFE 351 Query: 432 RHYRE 436 R YR+ Sbjct: 352 RFYRD 356 >gi|327480530|gb|AEA83840.1| acyl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 383 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 31/264 (11%) Query: 197 AIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----G 251 AIG LTE + G++ + ++ +++ D + L+G K F S+ ++ V G Sbjct: 120 AIGCFALTEPQAGSEAHNLRTRAERV-DSQWVLNGSKQFCSNAKRAKLAIVFAVTDPDLG 178 Query: 252 RVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDL 302 + G FLVP +P G +R ++K+G R++ T + S N G L Sbjct: 179 KKGLSAFLVP----TDTP-GFAVERSEHKMGIRASDTCAVSLSDCRIPQANLLGERGKGL 233 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ +E +I I ++ R + A+ YAR R G + + + +AD+ Sbjct: 234 AIALSNLEGGRIGI----GAQALGIARAAFEAALLYARERVQFGKPIAEHQSIANMLADM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + AA L A EA+ A++ A +MA V ++A++ GG Sbjct: 290 QTQLNAARLLILHAARLKSAGLPCLSEASQAKLFA-------SEMAEKVCSQAVQIHGGY 342 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY+E+ + R+YR++ I GS Sbjct: 343 GYLEDYPVERYYRDARITQIYEGS 366 >gi|301062233|ref|ZP_07202910.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2] gi|300443665|gb|EFK07753.1| putative butyryl-CoA dehydrogenase [delta proteobacterium NaphS2] Length = 383 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 37/274 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFL---SSPMSDAFIMLAQV----E 250 G GLTE G+D A S+ + DG + ++G K F+ S+ ++ L + + Sbjct: 122 GFGLTEPDAGSD--ASNSKTTAVLDGDQWVINGSKIFITNASTKLTSGVTSLCRTGTRED 179 Query: 251 GR--VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 GR + C LV E G+P G + + K+ R++ T EL F + + D N+ GP Sbjct: 180 GRPELSCILV----EAGTP-GFEAREMHGKLMWRASNTSELYFDDC---RVPDENM-LGP 230 Query: 309 VED--MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIAD 361 + +++ LD +S+ M + A+ A+ Y+R R G + + V +AD Sbjct: 231 RGNGFHQMMQTLDGGRLSIGAMGLGGAQGCYDLALKYSRERTQFGKPISNFQVNAFKLAD 290 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +AL+I A + ++ D+ K +EAA A++ Y C A++ GG Sbjct: 291 MALEIECARLILYKACWLRDQQKPFGKEAAMAKLHCSEVMYRCAN-------HAVQLHGG 343 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 G ++E + R YR+ + +G G + V ++ Sbjct: 344 YGLMKEYDVERFYRDQKL--LEIGEGTSEVQRIV 375 >gi|160896613|ref|YP_001562195.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160362197|gb|ABX33810.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 389 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 130/269 (48%), Gaps = 22/269 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV-EGRVGCFL 257 L LTE G++ + I + ++ D Y L+G K F++ +P++D F ++A+ EG G Sbjct: 128 LALTEPDAGSEASNIQTTARREGDH-YVLNGSKRFITNAPLADVFTVIARTGEGSTGSEG 186 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKI 314 + + SP GL + K+G + ++ F + ++G G MK+ Sbjct: 187 LTAFFVERSP-GLVTGQPYRKMGQAGSPVSDVHFQDCRVPADQIIGGRE-GQGFKTVMKV 244 Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L ++L +A+ + +R+ L A+ + R+R G + + +++ +AD +I AA Sbjct: 245 LNKQRLHL-AALCTGPAIRM-LDLALAHVRQREQFGQPVANFQLVQAMLADSRTEIFAAQ 302 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS- 429 ++ A A+ R E+ A + A + KY+ +M V A++ GG+GY+ + S Sbjct: 303 SMILEAAR----ARDRGEDVA---LSASMCKYFASEMCGRVADRAVQMFGGAGYVADFSP 355 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 I R++R+ + G+ L++ L+ Sbjct: 356 IERYFRDVRLFRLYEGTSQIHQLNIAKLM 384 >gi|56476513|ref|YP_158102.1| acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] gi|56312556|emb|CAI07201.1| Acyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 384 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 32/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------ 252 LTE G+D A++ + ++ D Y L+G K +++ +P + F ++A+ Sbjct: 122 FALTEPDSGSDAASLRTSARRDGD-CYVLNGTKRYITNAPEAGIFTVMARTTPDSHGAHG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPV 309 + F+V E G+P GL + K+G + ++ F + L+G G Sbjct: 181 ISAFIV----EQGTP-GLSLGPIDRKMGQKGAHICDVIFDDCRVPAANLIGGRE-EVGFK 234 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 MK+L D ++++ + V +AE A+ YA R G + + +++ +AD Sbjct: 235 TAMKVL---DKGRINIAAVCVGVAERMLDDALRYALERKQFGKPIAEFQLIQAMLADSKA 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA ++ A D+ EAA A++ A +M V A++ GG+GY Sbjct: 292 EIYAARSMVLDAARRRDDGLDVGTEAACAKLFA-------SEMCGRVADRAVQIFGGAGY 344 Query: 425 IEERSIARHYRESPANSILLGS 446 + E I R YR+ I G+ Sbjct: 345 LAEYGIERFYRDVRLFRIFEGT 366 >gi|229489108|ref|ZP_04382974.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229324612|gb|EEN90367.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length = 383 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 78/360 (21%), Positives = 142/360 (39%), Gaps = 46/360 (12%) Query: 121 DRSFEPVVRKQAHKIRAARLYL--MAQLEAGHLMSPSVTSASMVAL----MTTPRVHKDW 174 DR +P V++ H ++ M Q+ L P S V++ T + + W Sbjct: 20 DREVKPTVQEVEHANEYPEKWIDQMKQIGIYGLAIPEEYGGSPVSMPCYAQVTQELSRGW 79 Query: 175 AP---------------KIFSREYDPTNKAP-MQKTSVAIGLGLTEKRGGTDIAAITSQG 218 +F E P M + + LTE GG+D+ A+T+ Sbjct: 80 MSLAGAMGGHTVVAKLISLFGTEEQKVKYLPRMATGEIRATMALTEPGGGSDLQAMTTNA 139 Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQ 273 + + W ++ S +L + + G +V L+E G GL Sbjct: 140 KSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIV--LVEHG--EGLTVS 195 Query: 274 RLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGM 328 R K+G + + EL F N + +LG G + MK L + A ++ Sbjct: 196 RDLPKLGYKGVESCELSFDNYRISESAILGG-TPGKGFGQMMKGLETGRIQVACRALGVA 254 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 +L +++ YA++R G + + +AD+A + AA L++ A +D + Sbjct: 255 TAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDSGERCDM 314 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 EA A++ A ++A + A+ GG GY E + R++R++P +++G G Sbjct: 315 EAGMAKLYA-------SEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPL--MIVGEGT 365 >gi|226355420|ref|YP_002785160.1| acyl-CoA dehydrogenase [Deinococcus deserti VCD115] gi|226317410|gb|ACO45406.1| putative acyl-CoA dehydrogenase [Deinococcus deserti VCD115] Length = 380 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 17/246 (6%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC-F 256 G +TE G+D A I ++ +K D +Y L+G K ++S +P++ ++A + G Sbjct: 122 GFAITEPSSGSDAANIRTRAEKRGD-MYILNGTKHYISNAPIAGLLTVIAITDPAQGTRG 180 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + L+E + GL ++ K+G + + E+ F + LLG ++ G E + Sbjct: 181 MSAFLVEPQNTPGLSIGKVDEKMGQKGALSSEVIFQDAEVPAANLLGPEHL--GYREALG 238 Query: 314 ILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 IL + A S M+ L ++ +A+ R G + + ++ +A++ + I + Sbjct: 239 ILTNGRVGIAARSTGAMQRLLDLSVAHAKTREQFGQPIAEFQAVQFMLAEMEIAIQTSRL 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L ++A D+ + R MA + KY + V +A++ GG GY+++ + Sbjct: 299 LWQKVAWMVDQKQD-------VRRMASVAKYHATEALSQVADKAVQVAGGMGYMKDSPVE 351 Query: 432 RHYRES 437 R+YR+ Sbjct: 352 RYYRDQ 357 >gi|15608605|ref|NP_215983.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis H37Rv] gi|15840927|ref|NP_335964.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31792661|ref|NP_855154.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium bovis AF2122/97] gi|121637397|ref|YP_977620.1| putative acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661259|ref|YP_001282782.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra] gi|148822686|ref|YP_001287440.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11] gi|167967417|ref|ZP_02549694.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis H37Ra] gi|215403320|ref|ZP_03415501.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 02_1987] gi|215426806|ref|ZP_03424725.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92] gi|215430359|ref|ZP_03428278.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis EAS054] gi|215445660|ref|ZP_03432412.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85] gi|218753183|ref|ZP_03531979.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503] gi|219557374|ref|ZP_03536450.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17] gi|224989872|ref|YP_002644559.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799484|ref|YP_003032485.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435] gi|254364338|ref|ZP_04980384.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str. Haarlem] gi|254550483|ref|ZP_05140930.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186412|ref|ZP_05763886.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A] gi|260200524|ref|ZP_05768015.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46] gi|260204749|ref|ZP_05772240.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85] gi|289442914|ref|ZP_06432658.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46] gi|289447069|ref|ZP_06436813.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A] gi|289554744|ref|ZP_06443954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605] gi|289569490|ref|ZP_06449717.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17] gi|289574146|ref|ZP_06454373.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85] gi|289745217|ref|ZP_06504595.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987] gi|289750027|ref|ZP_06509405.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92] gi|289753549|ref|ZP_06512927.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054] gi|289757576|ref|ZP_06516954.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85] gi|289761625|ref|ZP_06521003.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503] gi|294995020|ref|ZP_06800711.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis 210] gi|297634032|ref|ZP_06951812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207] gi|297731018|ref|ZP_06960136.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN R506] gi|306775654|ref|ZP_07413991.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001] gi|306779475|ref|ZP_07417812.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002] gi|306784205|ref|ZP_07422527.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003] gi|306788572|ref|ZP_07426894.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004] gi|306792915|ref|ZP_07431217.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005] gi|306803174|ref|ZP_07439842.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008] gi|306807753|ref|ZP_07444421.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007] gi|306967573|ref|ZP_07480234.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009] gi|306971763|ref|ZP_07484424.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010] gi|307079483|ref|ZP_07488653.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011] gi|307084042|ref|ZP_07493155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012] gi|313658351|ref|ZP_07815231.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN V2475] gi|2791401|emb|CAA15996.1| PROBABLE ACYL-CoA DEHYDROGENASE FADE15 [Mycobacterium tuberculosis H37Rv] gi|13881132|gb|AAK45778.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31618251|emb|CAD96169.1| PROBABLE ACYL-COA DEHYDROGENASE FADE15 [Mycobacterium bovis AF2122/97] gi|121493044|emb|CAL71515.1| Probable acyl-CoA dehydrogenase fadE15 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134149852|gb|EBA41897.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis str. Haarlem] gi|148505411|gb|ABQ73220.1| acyl-CoA dehydrogenase FadE15 [Mycobacterium tuberculosis H37Ra] gi|148721213|gb|ABR05838.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis F11] gi|224772985|dbj|BAH25791.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253320987|gb|ACT25590.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 1435] gi|289415833|gb|EFD13073.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T46] gi|289420027|gb|EFD17228.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CPHL_A] gi|289439376|gb|EFD21869.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 605] gi|289538577|gb|EFD43155.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis K85] gi|289543244|gb|EFD46892.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T17] gi|289685745|gb|EFD53233.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis 02_1987] gi|289690614|gb|EFD58043.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T92] gi|289694136|gb|EFD61565.1| acyl-CoA dehydrogenase FADE15 [Mycobacterium tuberculosis EAS054] gi|289709131|gb|EFD73147.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis GM 1503] gi|289713140|gb|EFD77152.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis T85] gi|308215878|gb|EFO75277.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu001] gi|308327588|gb|EFP16439.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu002] gi|308331052|gb|EFP19903.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu003] gi|308334871|gb|EFP23722.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu004] gi|308338661|gb|EFP27512.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu005] gi|308345857|gb|EFP34708.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu007] gi|308350158|gb|EFP39009.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu008] gi|308354796|gb|EFP43647.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu009] gi|308358749|gb|EFP47600.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu010] gi|308362677|gb|EFP51528.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu011] gi|308366326|gb|EFP55177.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis SUMu012] gi|323720037|gb|EGB29148.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis CDC1551A] gi|326903090|gb|EGE50023.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis W-148] gi|328459232|gb|AEB04655.1| acyl-CoA dehydrogenase fadE15 [Mycobacterium tuberculosis KZN 4207] Length = 609 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 47/298 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-----SPMSDAF-IMLAQVEGR--- 252 LTE G+D+ A ++ + DG + + G K F+S + + F ++LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAFEQPDGTWHIEGVKRFISGGDVGNTAENIFHLVLARPEGAGPG 223 Query: 253 ---VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNT----FGFLL 299 + F VP L D G+ NG+ L++K+G +S+ T EL F G+L+ Sbjct: 224 TKGLSLFYVPNYLFDPDTFELGARNGVYVTGLEHKMGLKSSPTCELTFGGADVPAVGYLV 283 Query: 300 GDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGG---------- 347 G V G + ++ + + + S + A+ +A+ R V G Sbjct: 284 G--GVHNGIAQMFTVIEHARMTIGVKSAGTLSTGYLNALAFAKER-VQGADLTQMTDKTA 340 Query: 348 ---ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA-------YARIMA 397 ++ P ++R++ AL A D+A ++ A ++ Sbjct: 341 PRVTIMHHPDVRRSLMTQKAYAEGLRALYLYAAAHQDDAVAQRVSGADHDMAHRVDDLLL 400 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 PI K + A ++ E+++ +GGSG++ + + ++ R++ +S+ G+ LD Sbjct: 401 PIVKGVGSERAYEILTESLQTLGGSGFLVDYPLEQYIRDAKIDSLYEGTTAIQALDFF 458 >gi|307295778|ref|ZP_07575611.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] gi|306878434|gb|EFN09655.1| acyl-CoA dehydrogenase domain-containing protein [Sphingobium chlorophenolicum L-1] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/315 (21%), Positives = 119/315 (37%), Gaps = 57/315 (18%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + T + W PKI S EY + +TE G+D+ + + Sbjct: 103 APYIETYGTEEQKQRWLPKIASGEY-------------ITAIAMTEPGAGSDLQGVKTTA 149 Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGCFLVPRLLEDGSPNGLCYQR 274 +K + Y ++G K F+++ + + ++A+ + G G +V ++E G R Sbjct: 150 KKEGNQ-YTINGSKTFITNGQNANLVAVVAKTDPALGAKGISIV--MVETDDAQGFERGR 206 Query: 275 LKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVEDMKILIYLDS--------AI 322 +KIG T EL F+ D+ V T GP E ++ A+ Sbjct: 207 NLDKIGRDCADTSELFFN--------DVRVPTSNLLGPEEGKGFFQLMEKLPQERLILAV 258 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLA 377 + + M L + Y R R G +ID + +A+ A +S + Sbjct: 259 QAAAAMEYILRITVDYVRERKAFGKAVIDFQNTQFKLAEYKTQATIAKVFVNHCVSLHIK 318 Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 D A A + KYW V+ ++ GG GY+ E IA+ ++++ Sbjct: 319 GELDSA------------TASMAKYWVSDALWEVVDGCLQLHGGYGYMSEYPIAQAFKDA 366 Query: 438 PANSILLGSGNAMVL 452 N I G+ M L Sbjct: 367 RINRIYGGTNEIMKL 381 >gi|146305933|ref|YP_001186398.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas mendocina ymp] gi|145574134|gb|ABP83666.1| acyl-CoA dehydrogenase domain protein [Pseudomonas mendocina ymp] Length = 379 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGWLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 L + + G + K+G ++ T EL F + F +L+ +L Sbjct: 182 TSLFLVEANTPGFSKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFAYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + + +++ +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------GVGALASAEAALQWTLDYTRERKAFGKAVADFQNTRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA + KYW + V+ E ++ GG G Sbjct: 291 TEIQVGRVFIDRCLELHLQGKLDVPTAA-------MLKYWTTDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E IAR + ++ I G+ M Sbjct: 344 FMWEYPIARAWADARVQRIYAGTNEIM 370 >gi|330826585|ref|YP_004389888.1| butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329311957|gb|AEB86372.1| Butyryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 399 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 24/257 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P IG L+E G+D+AA++ + + DG Y L+G K W + ++D + + A Sbjct: 128 PAVARGTKIGAFALSEPDAGSDVAALSCRAEADGDG-YVLNGSKTWISNGGLADFYCVFA 186 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVST 306 + + G + + D GL + I A++ E +LG Sbjct: 187 RTQADAGSRGISAFIVDAGTAGLSVDDSISVISPHPLASLHFENCRVPRSCMLGP----- 241 Query: 307 GPVEDMKI------LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 P + K+ + A ++ R ++ E + +A RR + G L D + + A Sbjct: 242 -PDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHATRRRMFGQTLADFQLTQAAFG 300 Query: 361 DIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 D+A I + L++R A D + ++ + E A A++ A + A VI A++ Sbjct: 301 DMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAA-------TESAQQVIDRALQMF 353 Query: 420 GGSGYIEERSIARHYRE 436 GG G + R YR+ Sbjct: 354 GGKGVTVGNPLERLYRD 370 >gi|239503653|ref|ZP_04662963.1| Isovaleryl-CoA dehydrogenase (IVD) [Acinetobacter baumannii AB900] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGD-HFVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPQAGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRH 343 F N + NV G +K+L+ + A++S M L I Y +R Sbjct: 218 FFDNV---EVPAENVLGGVGNGVKVLMSGLDYERAVLSAGPLGIMDACLDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + + Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYSAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|225620820|ref|YP_002722078.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1] gi|225215640|gb|ACN84374.1| acyl-CoA dehydrogenase [Brachyspira hyodysenteriae WA1] Length = 367 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 47/296 (15%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKI------SDGIY 226 W F E P + +G GLTE GTD A GQ+ + + Sbjct: 82 WPILQFGTEAQKQKYVPKMASGEWLGAFGLTEPNAGTDAA-----GQQTVAVLDEATNEW 136 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285 ++G K F++ S ++ +++ A + G + + + + G + + K+G R +A Sbjct: 137 VINGSKIFITNSGYANVYVIFAMTDKSKGLKGISAFIVESTTPGFTVGKKEKKLGIRGSA 196 Query: 286 TVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA--------- 333 T EL F N LLG+L + KI A+M++ G R+ +A Sbjct: 197 TCELIFENARIPKDNLLGELG------KGFKI------AMMTLDGGRIGIASQALGIAQG 244 Query: 334 ---EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA 390 E + Y + R G + + + +A++ + + AA L ++ A S +A Sbjct: 245 ALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEAARLLVYKAAWRESNHLPYSVDA 304 Query: 391 AYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A A++ A T A V +A++ GG GY E + R R++ I G+ Sbjct: 305 ARAKLFASET-------AMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEIYEGT 353 >gi|254437348|ref|ZP_05050842.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] gi|198252794|gb|EDY77108.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Octadecabacter antarcticus 307] Length = 379 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 160/386 (41%), Gaps = 59/386 (15%) Query: 89 PGGERWDKVEFHPA--WHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL 146 P + W+K E P W L GL+ VR+++ +RL Sbjct: 26 PNAQAWEKAENIPKDLWPKLAELGF-GGLY-----------VREESGGSGLSRLDATLVF 73 Query: 147 EAGHLMSPSVTS--------ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAI 198 EA + PSV + A+M+ + + + P+ S E + + Sbjct: 74 EALSMSCPSVAAFLSIHNMCAAMIDKFGSDALRAQFLPRALSME-------------MVL 120 Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFL 257 LTE G+D AA+ ++ ++ ++G Y L+G K F+S S A+I++ + G G Sbjct: 121 SYCLTEPGSGSDAAALKTRAERTNEG-YALTGTKAFISGGGYSGAYIVMCRT-GDDGPKG 178 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 + ++ + +GL + L++K+G R+ T +++ + + + E+ K Y Sbjct: 179 ISTVIVEDKTDGLSFGGLEDKMGWRAQPTRQVQLDDCH------IPATNLVGEEGKGFTY 232 Query: 318 ---------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L+ A S+ + +L + + Y R G + ++ +AD+ +++ A Sbjct: 233 AMAGLNGGRLNIAACSLGAAQAALTQTVAYMAERKAFGKSIDQFQALQFRLADMEIELQA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + A D + + +AA MA K + + V + ++ GG GY+ + Sbjct: 293 ARVFLHQAAWKLD---TGTPDAAAHCAMA---KKFVTEAGSRVANDCLQLHGGYGYLADY 346 Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M + V Sbjct: 347 GIEKLVRDLRVHEILEGTNEIMRMIV 372 >gi|194748953|ref|XP_001956905.1| GF10158 [Drosophila ananassae] gi|190624187|gb|EDV39711.1| GF10158 [Drosophila ananassae] Length = 419 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 138 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 183 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278 L+G K W + +D I+ A+ G + F+V E G + +K Sbjct: 184 VLNGSKFWITNGSDADTLIVYAKTGGSDVPNKHSITAFIVETAWE-----GFSVAQKLDK 238 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327 +G R ++T EL F DL V + E+ + + + A V Sbjct: 239 LGMRGSSTCELVFQ--------DLKVPAKNILGQENKGVYVLMSGLDFERLVLAAGPVGL 290 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 M+ + A YA +R ++ + +++ +AD+ ++A + + +A S D A +RS Sbjct: 291 MQAACDVAFDYAHQRKQMNQLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGARS 349 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ + + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 350 SKDCAGVIL------YTAEKATQVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 402 >gi|149922652|ref|ZP_01911079.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica SIR-1] gi|149816449|gb|EDM75948.1| acyl-CoA dehydrogenase, long-chain specific [Plesiocystis pacifica SIR-1] Length = 384 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DGI--YCLSGHKWFLSSPM-SDAFIMLAQVEG---- 251 + +TE G+D+A + + +KI DG Y L+G K F+S+ M D ++ A+ E Sbjct: 123 IAMTEPNTGSDLAGLEATAKKIERDGETRYVLNGSKTFISNGMLCDLCLVAAKTENSEDP 182 Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDL 302 V F+V E G+P + ++L K+G S T EL F +N G Sbjct: 183 HRNVSLFVV----EAGTPGFVKAKKLA-KMGLASQDTAELAFEDCEIPEANRIGPEGAGF 237 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + ++ ++++ AIM + LA+ + Y R G + + +AD Sbjct: 238 MMLMNKLQQERLVV----AIMCQASAEQVLADTLKYVGEREAFGRPIGKFQNTRFKLADC 293 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ D R + Y + K W +M V+ E ++ GG Sbjct: 294 ATEVEVGRHF-------LDAVVRRHAKGEYLVKECSMAKLWQSEMLCRVVDECLQFFGGY 346 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E I+R Y ++ I G+ M Sbjct: 347 GYMLEYPISRAYMDARVQRIYAGTNEIM 374 >gi|39934070|ref|NP_946346.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39647918|emb|CAE26438.1| probable acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 381 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 15/259 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 + +TE G+D+ ++ + K+ Y ++G K F+++ + D I++A+ G L Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLDGDDYVINGQKTFITNGQNCDLIIVVARTGGAGAKGLS 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315 +LE G R +KIG ++ T EL F N LLG G V+ M+ L Sbjct: 185 LIVLETKDNPGFKRGRNLDKIGLHASDTSELFFENARTPKENLLGG-EEGKGFVQLMQQL 243 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L AI +V+ M ++A Y R R G QP+++ + A +A + Sbjct: 244 PQERLIIAIGAVAAMERAVALTSEYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 F D + + A + K+W + + E ++ GG GY++E I R Sbjct: 297 FIARVFVDYCLVQLVAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPIGRM 356 Query: 434 YRESPANSILLGSGNAMVL 452 + +S I G+ M L Sbjct: 357 FIDSRIQKIYGGTNEVMKL 375 >gi|119774499|ref|YP_927239.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B] gi|119766999|gb|ABL99569.1| isovaleryl-CoA dehydrogenase [Shewanella amazonensis SB2B] Length = 389 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/254 (20%), Positives = 118/254 (46%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K D Y L+G+K W + P + +++ A+ + G + Sbjct: 130 LAMSEPNAGSDVVSMKLHARKEGD-RYILNGNKMWITNGPDAHTYVIYAKTDLDKGPHGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G + +K+G R + T EL F + + + N+ G +K+L+ Sbjct: 189 TAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDC---EVPEENILGGLNNGVKVLMSG 245 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M + + Y R G + + +++ +AD+ + AA + Sbjct: 246 LDYERVVLSGGPLGIMTACMDIVVPYVHERVQFGKSIGEFQLVQGKLADMYTGMNAAKSY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + ++A + +A++ +GG+GY+ E + R Sbjct: 306 VYNVARACDRGETTRKDAAGVIL-------YAAELATKMALDAIQLLGGNGYVNEYATGR 358 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 359 LLRDAKLYEIGAGT 372 >gi|15789941|ref|NP_279765.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|169235662|ref|YP_001688862.1| acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum R1] gi|10580351|gb|AAG19245.1| acyl-CoA dehydrogenase [Halobacterium sp. NRC-1] gi|167726728|emb|CAP13514.1| putative acyl/butyryl-CoA dehydrogenase [Halobacterium salinarum R1] Length = 379 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/259 (22%), Positives = 119/259 (45%), Gaps = 24/259 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D + +++ + D Y L+G K F++ + ++ + ++ A + G + Sbjct: 125 LTEPTSGSDASDMSTTATRDGDD-YVLNGTKQFITNASVAGSVVVKAVTDPDAGYDGIST 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY 317 + D + +G +K+G ++ T E+ F N LLG+ G + K Sbjct: 184 FIVDPADDGFEVTAEWDKMGLNASPTCEISFDNCRIPADRLLGEEG--DGWTQTKKT--- 238 Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATAL 372 LD +S++ + LA+ + A + + QP+ ++ + D+ I A L Sbjct: 239 LDGGRISIAALSTGLAQGAYTAASEYATDREQFGQPISRFDAVRNTLVDMHRKIERARLL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + R A+ +D +S + E+A A++ A + A V +A++ +GG GY + + R Sbjct: 299 TRRAASKYDAGESVTRESALAKLDA-------SEAAREVAEDAVQTLGGYGYTTDFAPQR 351 Query: 433 HYRESPANSILLGSGNAMV 451 +R+ A + +G G + + Sbjct: 352 FFRD--AKLMEIGEGTSEI 368 >gi|91974836|ref|YP_567495.1| isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] gi|91681292|gb|ABE37594.1| Isovaleryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] Length = 392 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 14/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K+ + L+G K W + P +D ++ A+ + + Sbjct: 129 LAMSEAGAGSDVVSMKLRADKVGSN-FVLNGTKMWITNGPNADTLVVYAKTDPAAKSKGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 + + G +K+G R + T EL F N + + NV + +++L+ Sbjct: 188 TAFIVERDFKGFSTSPKLDKLGMRGSNTCELVFDNC---EVPEANVLGEVGQGVRVLMSG 244 Query: 318 --LDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + A+M+ V M L + YAR R G + + ++ +AD+ A A Sbjct: 245 LDYERAVMAAGPVGIMAACLDLVVPYARDRKQFGQPIGEFQFIQGKLADMYTAQMTARAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D K +AA A I + + A V AEA++ +GG+GY+ E R Sbjct: 305 LYGVARAID-GKVLQGQAARKDCAAVI--LYAAEQATKVAAEAIQIMGGNGYVNECPAGR 361 Query: 433 HYRESPANSILLGS 446 ++R++ I G+ Sbjct: 362 YWRDAKIFEIGAGT 375 >gi|323359839|ref|YP_004226235.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] gi|323276210|dbj|BAJ76355.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] Length = 389 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 14/256 (5%) Query: 180 SREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM 239 S E T M + V GLTE G+D A++T++ ++ D +W + + Sbjct: 109 SEEQKQTWLPRMARGEVIGCFGLTEPGSGSDPASMTTRARQDGDAWVLDGAKRWIGLASI 168 Query: 240 SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLL 299 +D ++ A+ + V FLVP G+P G + K+ R++ ++ ++ L Sbjct: 169 ADVAVIWARTDEGVRGFLVP----TGTP-GFVATPIAPKMSMRASIQCDITLTDVRVPLD 223 Query: 300 GDLNVSTGPVEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 L ++ G L I + R S A A+ YA R G + + ++ Sbjct: 224 AVLPLARGLSAPFACLNNARYGIGWGVIGAARDSYATALAYAGERRQFGQPIAAFQLTQQ 283 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 + D+A++I A ++ RL D + +S + + A++ + A V+ EA Sbjct: 284 KLVDMAIEIEKAQLVALRLGRLKDAGRLQSHQISVAKLA-------NTRAAIDVVREART 336 Query: 418 CIGGSGYIEERSIARH 433 +GG+G E S RH Sbjct: 337 ILGGNGVTAEFSPMRH 352 >gi|269125411|ref|YP_003298781.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310369|gb|ACY96743.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length = 380 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 16/257 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ I + K D Y L+G K F+S+ ++D I+ A+ + G V Sbjct: 124 IAMTEPAAGSDLQGIKTTAIKDGDH-YVLNGSKTFISNGILADLVIVAAKTDPSAGARGV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L+ + G R K+G + T EL F N LLG+ + G + M+ L Sbjct: 183 SLLVVERGMEGFTRGRNLEKVGMHAQDTAELFFDNVRVPKENLLGEEGM--GFIYLMQNL 240 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L +++G S + + Y + R G + + +A++ ++ A A + Sbjct: 241 ARERLSIGTSALAGAEASFEQTLEYCKTREAFGRPIGKFQHNRFVLAEMKTELTVARAFT 300 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 + + +EEAA + KYW ++ V+ ++ GG GY+ E I + Sbjct: 301 EQCILKQVNGELTAEEAA-------MLKYWNTELIKRVVDRCVQLHGGYGYMLEYPIGKA 353 Query: 434 YRESPANSILLGSGNAM 450 Y++ +I G+ M Sbjct: 354 YQDVRIQTIFGGTTEIM 370 >gi|295400863|ref|ZP_06810839.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977126|gb|EFG52728.1| acyl-CoA dehydrogenase domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 29/270 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T IG LTE G++ + + + D Y ++G K ++++ + F ++A Sbjct: 112 PKMATGEWIGAFALTEPSAGSNATNLKTTAVRKGDR-YIINGSKHYITNAKDAHVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304 + G + + + G + + K+G R + + EL F DL V Sbjct: 171 VTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRGSHSCELFFE--------DLEVPVE 222 Query: 305 ------STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 G V +KIL + + + + + L +++ YA R G +I+Q + Sbjct: 223 NRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAMEREQFGKPIIEQQAIL 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A++I +++R+A D+ + +EAA + K + ++ V A+ Sbjct: 283 HMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAA-------MVKLYGSEVYNRVADRAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI E I R YR++ I G+ Sbjct: 336 QVHGGLGYIAEYPIERFYRDARITRIYEGT 365 >gi|262198058|ref|YP_003269267.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365] gi|262081405|gb|ACY17374.1| Butyryl-CoA dehydrogenase [Haliangium ochraceum DSM 14365] Length = 413 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 25/261 (9%) Query: 202 LTEKRGGTDIAAITSQGQKI-----------SDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 L+E G+D+AA+ ++ + + + Y L G K W + ++D +++ A+ Sbjct: 139 LSEPEAGSDVAAMATEARLLDGGDGAGQGDENGAGYVLRGTKTWISNGGIADFYVVFART 198 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FGFLLGDLNVSTGP 308 G + D GL + + AT+ E LLG G Sbjct: 199 GEGAGARGLSAFAVDAGAPGLRVAARIDTMAPHPLATLAFEDCRVPADALLG--TAGRGF 256 Query: 309 VEDMKILIYLDSAI--MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 M L S + ++ R +L EA+ AR R + GG+L D P+ + +AD+A ++ Sbjct: 257 HAAMATLDVFRSTVGAAALGFARRALDEAVARARSRVMFGGVLADLPLAQAKLADMATEL 316 Query: 367 AAATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA L +R A++ D R + EAA A K + + A +I +A++ GG G Sbjct: 317 DAAALLVYRAAHAKDGGAERVTREAAMA-------KMYATEAAQRIIDDAVQLFGGLGVQ 369 Query: 426 EERSIARHYRESPANSILLGS 446 + YRE A I G+ Sbjct: 370 RGSKVEELYREIRALRIYEGA 390 >gi|326316886|ref|YP_004234558.1| butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373722|gb|ADX45991.1| Butyryl-CoA dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 389 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA+ + G Y L G K W + ++D +++ A+ G + Sbjct: 125 FALSEPEAGSDVAAMGCTA-RAEGGDYVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 183 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-Y 317 + D G I A + + G + P E K+ + Sbjct: 184 SAFIVDADTPGFSIAERIEVIAPHPLARLRFD-----GCRVPAAQRLGAPGEGFKVAMRT 238 Query: 318 LDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD SV+ R ++ EA+ A R + GG+L D + + +A +A I +A L Sbjct: 239 LDVFRTSVAAAALGFARRAMDEALSRATTRRMFGGVLADFQLTQAKLAQMATAIDSAALL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++R A D + + EAA A++ A + A VI A++ GG G + + + R Sbjct: 299 TYRAAWLRDRGATVTREAAMAKMTA-------TENAQQVIDAAVQLFGGLGVVSGQPVER 351 Query: 433 HYRESPANSILLGS 446 YRE A I G+ Sbjct: 352 LYREIRALRIYEGA 365 >gi|262369648|ref|ZP_06062976.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046] gi|262315716|gb|EEY96755.1| isovaleryl-CoA dehydrogenase [Acinetobacter johnsonii SH046] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 36/284 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 + PK+ S EY +G L ++E G+D+ ++ + + D + L+G K Sbjct: 115 YLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLKAEDCGD-HFLLNGSK 159 Query: 233 -WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 W + +D ++ A+ + G + L + G + +K+G R + T L F Sbjct: 160 MWITNGGDADVLVVYAKTDLHAGAKGMTAFLVEKGMEGFSHGTHLDKLGMRGSNTYPLFF 219 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVS 345 N + NV G K+L+ + A++S M + I Y R Sbjct: 220 DNV---KVPKENVMGGVGNGTKVLMSGLDYERAVLSAGPLGIMDACMDTVIPYIHDRKQF 276 Query: 346 GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPITKY 402 G L + +M+ IAD+ A AL + + D+A +S ++AA A + A Sbjct: 277 GQALGEFQLMQGKIADMYSTWLACKALVYAVGAECDKADHSRSLRKDAASAILYAAEKAT 336 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + E ++ +GG+GYI E S R +R++ I G+ Sbjct: 337 W-------MAGETIQTLGGNGYINEFSAGRLWRDAKLYEIGAGT 373 >gi|302537838|ref|ZP_07290180.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] gi|302446733|gb|EFL18549.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. C] Length = 401 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 45/280 (16%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+ K D Y L+G K +L++ S + + EG + Sbjct: 135 GSDVSAITSKAVKDGDE-YVLNGQKMWLTNGGSSTLVAVLVRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L + P GL +K+G + T EL ++ L + V + Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRIPANRVLGGQTG 245 Query: 316 IYLDSAIMSVSGMRVSLAE------------AIHYARRRHVSGGILIDQPVMKRAIADIA 363 + V RV++A + YA++RH G + + ++ +A++A Sbjct: 246 RGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAEHQAIQFKLAEMA 305 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA A+ A D + EA A KY + V+ +A GG G Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYG 358 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 + +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|9789985|ref|NP_062800.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus] gi|66773808|sp|Q9JHI5|IVD_MOUSE RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; Flags: Precursor gi|7025453|gb|AAF35888.1|AF225989_1 isovaleryl dehydrogenase precursor [Mus musculus] gi|7689117|gb|AAF67667.1| isovaleryl CoA dehydrogenase [Mus musculus] gi|17390762|gb|AAH18325.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus] gi|20073124|gb|AAH27198.1| Isovaleryl coenzyme A dehydrogenase [Mus musculus] gi|126541071|emb|CAM46006.1| isovaleryl coenzyme A dehydrogenase [Mus musculus] gi|148695982|gb|EDL27929.1| isovaleryl coenzyme A dehydrogenase [Mus musculus] Length = 424 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + V Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 P ++E G P G + +K+G R + T EL F + + NV + + Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +L+ LD + ++G M+ L I Y R G + +M+ +AD+ Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ + +A + DE ++ A + + + A V + ++C+GG+GYI Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 + + R R++ I G+G + V Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410 >gi|89092356|ref|ZP_01165310.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92] gi|89083444|gb|EAR62662.1| Isovaleryl-CoA dehydrogenase [Oceanospirillum sp. MED92] Length = 373 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 34/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG---- 254 L ++E G+D+ ++ + D Y L+G+K W + P ++ +++ A+ + + G Sbjct: 115 LAMSEPNAGSDVVSMKLHARDNGDH-YLLNGNKMWITNGPDANTYVIYAKTDIKAGPKGI 173 Query: 255 -CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVE 310 F+V R P +Q+L +K+G R + T EL F + +LG+LN Sbjct: 174 TAFIVERDF----PGFSRHQKL-DKLGMRGSNTCELVFEDCPVPKENILGELNGG----- 223 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIAL 364 +K+L+ LD + +SG + + EA I Y R R G + + +++ +AD+ Sbjct: 224 -VKVLMSGLDYERLVLSGGPLGIMEAAMDIVIPYIRDRKQFGQAIGEFELVQGKVADMYS 282 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ + + A + ++ ++AA + + +MA + +A++ +GG+GY Sbjct: 283 IMNASKSYVYMAAQAAVRGEASRKDAAGCIL-------YTAEMATKIALDAIQLLGGNGY 335 Query: 425 IEERSIARHYRESPANSILLGS 446 I E R R++ I G+ Sbjct: 336 INEFPTGRLLRDAKLYEIGAGT 357 >gi|195375915|ref|XP_002046743.1| GJ12315 [Drosophila virilis] gi|194153901|gb|EDW69085.1| GJ12315 [Drosophila virilis] Length = 347 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 18/256 (7%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV--EGRVGC 255 GL ++E G+D+ A+ + ++ D Y L+G K W + +D I+ A+ G Sbjct: 85 GLAMSEVGAGSDVLAMKLRAERKGD-YYLLNGTKFWISNGSDADTLIVYAKTGASGDPDR 143 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + + + S G + +K+G R ++T EL F N +LG N G M Sbjct: 144 KAITAFIIETSWEGFSVGKKLDKLGIRGSSTCELVFDNVKVPAKNVLGQEN--NGVYVLM 201 Query: 313 KILIYLDSAIMSVSG--MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L Y + + VS M+ + A YA R G ++ + +++ +AD+ I++ Sbjct: 202 SGLDYERAVLSGVSMGLMQAACDVAFEYAHERKQMGKLIGEFQLIQGKMADMYTTISSCR 261 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + + + S D S++ A ++ C + + V +AM+ +GG+GYI + Sbjct: 262 SYFYTVVRSLDAGMRSSKDCAGVFLL-------CGEKSTQVALDAMQILGGNGYINDYPT 314 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 315 GRILRDAKLCEIAGGT 330 >gi|169126473|gb|ACA48487.1| putative acyl-CoA dehydrogenase [Bacillus thuringiensis] Length = 312 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 23/210 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 K W + R++ P M K ++ LTE G+D A+ + ++++D + L+GH Sbjct: 94 KRWGTEEQKRKWLP----EMAKGNLLFSFALTEPEVGSDAKAVGTSYKQVNDH-FILNGH 148 Query: 232 K-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 K W + ++D F++ A EG+V F+V R S G+ ++ + + S+ E+ Sbjct: 149 KKWISFADIADCFLVFASSEGKVSAFIVER-----SMTGVSTNKMSKLLASNSSHIAEIH 203 Query: 291 FSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRR 342 + LLG + V + LD S++ V++A+ + Y+RRR Sbjct: 204 LQDVKVPAENLLGPIGGGWSYV----VNTALDHGRYSIAWAGVAIAQEALEAMVAYSRRR 259 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + ++ +A+ +++I AA +L Sbjct: 260 KQGNKYICEYEAIQTILAEASVNIKAARSL 289 >gi|192289597|ref|YP_001990202.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283346|gb|ACE99726.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 381 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 15/259 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 + +TE G+D+ ++ + K+ Y ++G K F+++ + D I++A+ G L Sbjct: 126 IAMTEPGTGSDLQSVRTTA-KLDGDDYVINGQKTFITNGQNCDLIIVVARTGGAGAKGLS 184 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKIL 315 +LE G R +KIG ++ T EL F N LLG G V+ M+ L Sbjct: 185 LIVLETKDNPGFKRGRNLDKIGLHASDTSELFFENARTPKENLLGG-EEGKGFVQLMQQL 243 Query: 316 IY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L AI +V+ M ++A Y R R G QP+++ + A +A + Sbjct: 244 PQERLIIAIGAVAAMERAVALTSEYTRERKAFG-----QPIIE--FQNTAFTLAERKTEA 296 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 F D + + A + K+W + + E ++ GG GY++E I R Sbjct: 297 FIARVFVDYCLVQLVAGNLDAVTASMAKWWTTQKQVETVDECLQLHGGYGYMQEYPIGRM 356 Query: 434 YRESPANSILLGSGNAMVL 452 + +S I G+ M L Sbjct: 357 FIDSRIQKIYGGTNEVMKL 375 >gi|170720997|ref|YP_001748685.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida W619] gi|169759000|gb|ACA72316.1| acyl-CoA dehydrogenase domain protein [Pseudomonas putida W619] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G +K+G R + T EL F N G L G + V Sbjct: 187 TAFIVERDWQGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGQLNGGVRV------- 239 Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD + +SG M+ + + Y R G + + +++ IAD+ + Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +A + D ++ ++AA + + + A + EA++ +GG+GYI Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350 Query: 427 ERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370 >gi|87121583|ref|ZP_01077471.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121] gi|86163115|gb|EAQ64392.1| Glutaryl-CoA dehydrogenase [Marinomonas sp. MED121] Length = 393 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 28/243 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A+++++ ++ G Y L+G+K W +SP++D F++ A++EG + F++ Sbjct: 138 FGLTEPDSGSDPASMSTRAIQVEGG-YRLTGNKMWITNSPIADVFVVWAKLEGVIRGFIL 196 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 D +GL +++ K R++ T E+ + F + D+ GP Sbjct: 197 -----DKGMSGLSAPKIEGKFSLRASITGEIVMDDVFVPQENIFPDIKGLAGP------F 245 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAAT 370 L+ A ++ + AE A R + ++P ++++ +AD+ DI+ Sbjct: 246 GCLNKARFGIAWGAMGAAEFCFDAARTYTLDRKQFNRPLAANQLIQKKLADMQTDISLGL 305 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 ++ D+ + E + + K C A + + + GG+G +E + Sbjct: 306 QGCLQMGRLMDQEQCPVE-------LISLMKRNNCGKALDIARVSRDMHGGNGISDEFGV 358 Query: 431 ARH 433 RH Sbjct: 359 IRH 361 >gi|332304683|ref|YP_004432534.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172012|gb|AEE21266.1| acyl-CoA dehydrogenase domain-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 394 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 20/239 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D A++ S +K+ DG Y L+G+K W +SP++D FI+ A+++G + F Sbjct: 139 FGLTEPNSGSDPASMLSYARKVDDG-YLLNGNKMWITNSPIADVFIVWAKLDGVIRGF-- 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G GL +++ K R++ T E+ + +L D+ GP + Sbjct: 196 --ILEKGMA-GLTSPKIEGKFSLRASITGEIVMQDVLVPEENILPDVKGLKGPFSCLNKA 252 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y A S+ +A Y R L ++++ +AD+ +I+ L+ Sbjct: 253 RY-GIAWGSLGAAEFCWHQARQYCLDREQFARPLAANQLIQKKLADMQTEISIGL-LACL 310 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMECIGGSGYIEERSIARH 433 A +A EA ++ I + C K + A IA M G +G +E + RH Sbjct: 311 QAGRLMDANDLPPEA-----ISLIKRNSCGKALEIARIARDMH--GANGVSDEYHVIRH 362 >gi|289643093|ref|ZP_06475224.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] gi|289507137|gb|EFD28105.1| acyl-CoA dehydrogenase domain protein [Frankia symbiont of Datisca glomerata] Length = 386 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 36/297 (12%) Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKIS 222 A + TP W P + S E + + +TE G+D+ + ++ + Sbjct: 104 AELATPEQLGRWVPGMTSGE-------------LVAAIAMTEPGAGSDLRGVRTRATRTP 150 Query: 223 DGIYCLSGHKWFLSSPM-SDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 G + L+G K F+S+ + +D I++AQ +G G L+ ++E G G R K+ Sbjct: 151 GG-WLLNGAKTFISNGIHADLVIVVAQTGSDGDAGLSLL--VVERGMA-GFARGRNLGKV 206 Query: 280 GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI------YLDSAIMSVSGMRVSLA 333 G + T EL F N + D NV P ++ L+ L A+ +V+ M LA Sbjct: 207 GLHAQDTAELSFDNV---AVPDANVLGQPGRGLRYLMANLAQERLTIAVQAVAAMEGVLA 263 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 + + Y R R G QP+ + + L A T + R+ + + +E + Sbjct: 264 DTLDYVRTRTAFG-----QPIGRFQHSAFLLAELATTVKAARVFVDWGVEEHLAE--SLG 316 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + K + V+ ++ GG GY E + R + ++ +I G+ M Sbjct: 317 ADTAAVIKLHTTEAQQRVVDRCLQLHGGYGYTTEYRVGRAWADARVQTIYGGTSEMM 373 >gi|322705469|gb|EFY97055.1| acyl-CoA dehydrogenase, putative [Metarhizium anisopliae ARSEF 23] Length = 441 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 28/321 (8%) Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +L L P + + A P V W K + + P ++T +AI TE Sbjct: 111 ELARSGLAGPGASLTAGFAFGIPPIVK--WGSKELKQRFLPDFLTGRKRTCIAI----TE 164 Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPR 260 G+D+A IT+ +K +DG Y ++G KW + SD M + GR G ++ Sbjct: 165 PDAGSDVANITTTAEKTADGKHYIINGAKKWITNGIWSDYTTMAVRTGGAGRAGLSVIIV 224 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPVEDMK 313 L+ G P G+ +RL G ++ T +E N LLG L + + Sbjct: 225 PLK-GHP-GVTMRRLPVG-GQKAGGTTYIELDNVKVPVENLLGREGDGLRIILTNFNHER 281 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 ++I A+ R +LA A Y +R G L+DQPV++ +A ++ A + Sbjct: 282 LII----AVGVTRQARTALAAAFEYCLKRDAFGKKLMDQPVVRHRLAKAGAELETMNAWT 337 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS---I 430 +L S+ + I A + K + A+ GG+G+ + Sbjct: 338 EQLLYQLCHLSSQEADLKLGGITA-LAKAKSAMVLNECAQVAVLLFGGNGFTASGQGALV 396 Query: 431 ARHYRESPANSILLGSGNAMV 451 YR+ P I GS + ++ Sbjct: 397 EAIYRDVPGARIPGGSEDVLL 417 >gi|312129771|ref|YP_003997111.1| acyl-CoA dehydrogenase domaiN-containing protein [Leadbetterella byssophila DSM 17132] gi|311906317|gb|ADQ16758.1| acyl-CoA dehydrogenase domain-containing protein [Leadbetterella byssophila DSM 17132] Length = 388 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 21/240 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGCFLV 258 GLTE G++ + + ++ D + W ++P D ++ A+ E GR+ +V Sbjct: 132 FGLTEPDFGSNPGGMLTHFREEGDFLILNGSKTWISNAPFCDIAVVWAKNEQGRIKGLIV 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R +E G +KNK R++AT EL F + N+ G L L Sbjct: 192 ERGME-----GFSTPEIKNKWSLRASATGELVFDEV---KVPKSNLLPGADGLRSPLKCL 243 Query: 319 DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALS 373 D+A +S + A + +++ I D+P+ ++ +A+ +I A L+ Sbjct: 244 DNARYGISWGAIGAAVDCYLTAKQYALERIQFDKPIASFQLTQKKLAEFLTEITKAQLLT 303 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++L + + K+ S + + A K MA + EA + +GG+G E SI RH Sbjct: 304 WKLGVNKNAGKASSAQISMA-------KRNNVAMALNIAREARQILGGNGITGEFSIMRH 356 >gi|296169372|ref|ZP_06850996.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895961|gb|EFG75652.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 382 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 32/302 (10%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S ++ +A + K W PK+ S E + I + +TE G+D+ +I Sbjct: 99 STLASHYIAEYASEEQKKRWIPKMVSGE-------------MVIAVAMTEPGTGSDLQSI 145 Query: 215 TSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y ++G K F+S+ D +++A+ E + + E G Sbjct: 146 RTTAVRDGDE-YVINGSKTFISNGSHCDLVVIVAKTESGLSLMVA----ETEGLAGFQRG 200 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGM 328 R+ K+G T EL F++ LLG + G + M+ L L + +++ Sbjct: 201 RVLEKVGQHGQDTRELAFTDMRVPAANLLGGVE-GKGFAQLMEQLPRERLTIGVEAIAMA 259 Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE 388 ++ E I Y + R G L+ K +A+ ++ A AL D R Sbjct: 260 EAAVVETIRYVKERTAFGKPLLAFQNTKFVLAECKAEVLAGKAL-------IDYCTGRYL 312 Query: 389 EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + A I K W V + ++ GG GY+ E IA+ Y + I G+ Sbjct: 313 DGKLDAATASIAKMWGSDKQVEVTDKCLQLFGGYGYMMEYPIAQMYAAARVQKIYGGTNE 372 Query: 449 AM 450 M Sbjct: 373 IM 374 >gi|269925483|ref|YP_003322106.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789143|gb|ACZ41284.1| acyl-CoA dehydrogenase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 406 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + LTE G+D A I + ++ D Y L+G K W + +D F++ A Sbjct: 113 PQARGEKLATFALTEPGHGSDAANIETTARREGD-YYVLNGQKTWISLADKADHFLLFAT 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 ++ G + + + GL + K+G R+ T ++ N + L Sbjct: 172 LDRSKGYKGITAFILERGFEGLSTSTIHGKLGVRAGNTGQIFLDNVRVPIENRLGEEG-- 229 Query: 309 VEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + +D ++V+ V LA A + Y R G + ++++ IA++ Sbjct: 230 -EGFKIAMSAIDQGRLTVAAGAVGLARACLEASLKYCHDREAFGQEIGKFQLVQQMIANM 288 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 L I A L R A + + E + A K++ C +A +A+E G + Sbjct: 289 QLGIDTAKLLVHRAAWLKNHGIRSTRETSMA-------KWYACNVALKAAEDAIEIHGAN 341 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY E + R++R + I G+ Sbjct: 342 GYSNEFPVERYWRNARGAVIYEGT 365 >gi|146283538|ref|YP_001173691.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501] gi|145571743|gb|ABP80849.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri A1501] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 134/308 (43%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + + + Sbjct: 134 NAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G +K+G R + T EL F + L V G V K+L+ LD + Sbjct: 193 RDWKGFSRGNKFDKLGMRGSNTCELFFDDVEVPQENVLGVENGGV---KVLMSGLDYERV 249 Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++G M+ L + Y R G + + ++ +AD+ + A+ A + +A Sbjct: 250 VLAGGPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQ 309 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D ++ ++AA + + + A + +A++ +GG+GYI E R R++ Sbjct: 310 ACDRGETTRKDAAGVIL-------YTAENATQMALQAIQILGGNGYINEFPTGRLLRDAK 362 Query: 439 ANSILLGS 446 I G+ Sbjct: 363 LYEIGAGT 370 >gi|126327516|ref|XP_001374385.1| PREDICTED: similar to acyl-Coenzyme A dehydrogenase-8 [Monodelphis domestica] Length = 415 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 31/273 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + ++ D Y L+G K F+S + SD ++++ + G + Sbjct: 160 LTEPGSGSDAASLLTSAKRQGDH-YILNGSKAFISGAGESDIYVVMCRTGGSGPKGISCL 218 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308 ++E +P GL + + + K+G S+ + F + GFL+ ++ G Sbjct: 219 VIEKDTP-GLSFGKKEKKVGWNSHPIRAVIFEDCVVPVANRIGDEGQGFLIAMKGLNGGR 277 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + A S+ S+ A +Y R G L ++ +AD+A + A Sbjct: 278 I---------NVASCSLGAAHASIVLARNYLNVRKQFGKPLASNQYLQFKLADMATRLVA 328 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L R A A + EE A A ++ + K + + ++ +A++ GG GY+++ Sbjct: 329 SR-LIIRNA-----AVALQEERADAMVLCSMAKLFATEECFSICNKALQMHGGYGYLKDY 382 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLEK 460 ++ ++ R+S + IL GS M +L NLL++ Sbjct: 383 AVQQYVRDSRVHQILEGSDEVMRMLISRNLLQE 415 >gi|160899128|ref|YP_001564710.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160364712|gb|ABX36325.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 388 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 29/272 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG------- 254 LTE G+D ++ ++ + ++ Y ++G K F+S S ++L G G Sbjct: 124 LTEPGAGSDAGSLKTRAE-LAGHEYIINGAKAFISGAGSTDMLVLMARTGDAGSGASGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F VP L G+ Y + + K+G S T + F N + N+ E KI Sbjct: 183 AFAVPADLP-----GISYGKKEEKMGWNSQPTRVISFDNV---RIPAQNLLGREGEGFKI 234 Query: 315 LIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + ++ A SV + +L +A Y R G + ++ +AD+A ++ A Sbjct: 235 AMKGLDGGRINIATCSVGAAQGALTQAQQYMHERKQFGKPIASFQALQFKLADMATELVA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + RLA S +A +R A + K + V EA++ GG GYI E Sbjct: 295 ARQM-VRLAASKLDAGARD-----ASTYCAMAKRFVTDAGFMVCNEALQLHGGYGYIREY 348 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 + R R++ + IL G+ M V+ +LE Sbjct: 349 PLERLMRDARVHQILEGTNEIMRVIIARRMLE 380 >gi|323137070|ref|ZP_08072150.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] gi|322397831|gb|EFY00353.1| acyl-CoA dehydrogenase domain-containing protein [Methylocystis sp. ATCC 49242] Length = 413 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 37/312 (11%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A M+ + +PR ++W P++ S E + LTE G+D AA+ ++ Sbjct: 125 AGMIDVFGSPRQRREWLPRLVSMETLSS-------------YCLTEPGCGSDAAALRTRA 171 Query: 219 QKISDGIYCLSGHKWFLSSPMSDA----FIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274 ++ D +Y ++G K F+S + +I++A+ G+ G V + +G+ +G+ + Sbjct: 172 ERDGD-VYVVNGEKQFISGASAGGDRHLYIVMART-GQDGPGGVSTFVIEGTSHGMRFGS 229 Query: 275 LKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG 327 + K+G + T + F N G ++ ++ + L+ S+ G Sbjct: 230 NERKMGWNAQPTRAIFFENCRVPAENMLGEEGAGFKIAMAGLDGGR----LNIGACSLGG 285 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 + +L + + Y R R G L D ++ +AD+ AT L A + A + Sbjct: 286 AQSTLMKTLDYMRERKAFGKPLDDFQALQFRLADM------ATGLETARALLWRAAAALD 339 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 +A A I+ + K + V A++ GG GY+ + + + R+ + IL G+ Sbjct: 340 AKAKDASILCAMAKRVATDVGFDVANNALQLHGGYGYLCDYGVEKIVRDLRVHQILEGTN 399 Query: 448 NAMVLDVL-NLL 458 M L V NLL Sbjct: 400 EIMRLIVARNLL 411 >gi|268551861|ref|XP_002633912.1| C. briggsae CBR-IVD-1 protein [Caenorhabditis briggsae] gi|187023762|emb|CAP37120.1| CBR-IVD-1 protein [Caenorhabditis briggsae AF16] Length = 417 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 28/273 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L ++E + G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 157 LAMSEAQAGSDVVSMKLRAEKKGDK-YILNGTKFWITNGPDADVLVVYAKTDPSKHQHGI 215 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 CFLV E +P G +K+G R + T EL F N + + + G + + Sbjct: 216 TCFLV----EKNTP-GFTQSPKLDKLGMRGSNTCELVFDNC---EIHESQIMGGVGKGVY 267 Query: 314 ILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ LD + +SG M+ + A YA +R G + +++ +AD+ + Sbjct: 268 VLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLN 327 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ + + +A + D+ +++ A + + + V +A++ +GG+GYI + Sbjct: 328 ASRSYLYMVAKAADKGNISNKDCAGVIL-------YVAEKCTQVCLDAIQILGGNGYIND 380 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 R R++ I G+ L + L K Sbjct: 381 YPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNK 413 >gi|321462443|gb|EFX73466.1| hypothetical protein DAPPUDRAFT_188892 [Daphnia pulex] Length = 277 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 33/262 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 G+TE G+D+AAI ++ +K D Y L+G K W ++ ++ + +LA+ L P Sbjct: 11 GVTEPGAGSDVAAIKTKAEKKGDH-YVLNGQKMWITNAGHANWYFVLARTN------LDP 63 Query: 260 R---------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 + + D GL R + +G R++ T + F + L+ NV G Sbjct: 64 KAPAHKALTGFIVDRDTPGLTPGRKEINMGQRASDTRGITFED---VLVPKENVLIGEGT 120 Query: 311 DMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +I + D +V+ V LA EA YA R G + ++ +A++A+ Sbjct: 121 GFEIAMGAFDRTRPTVASGAVGLAQRALDEATKYALERSTFGVPIAKHQLVMNMLAEMAM 180 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 I +A + R + D+ + + A+ A+ MA C +A++ GG+GY Sbjct: 181 SIESARLVWMRASWETDQGRRNTYYASIAKAMAADVANKCA-------TDAVQIFGGNGY 233 Query: 425 IEERSIARHYRESPANSILLGS 446 + + + R++ I G+ Sbjct: 234 NTDYPVEKLMRDAKIYQIYEGT 255 >gi|306842316|ref|ZP_07474976.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2] gi|306287573|gb|EFM59029.1| acyl-CoA dehydrogenase family protein [Brucella sp. BO2] Length = 592 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 131/297 (44%), Gaps = 42/297 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY-----ARIMAP 398 +I+ P ++R + + AA ++++ A++ D + + A A ++ P Sbjct: 339 AGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHATDGADAQFWSDRAGLLTP 398 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|269926290|ref|YP_003322913.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789950|gb|ACZ42091.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 26/235 (11%) Query: 216 SQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQR 274 ++ +K +DG + LSG K F++ +P+ D FI+LA ++ R FLVPR +GL + Sbjct: 144 TRAEKKNDG-WVLSGRKSFVTGAPILDYFIVLAAIDDRRASFLVPR-----DSDGLSIEE 197 Query: 275 LKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS 331 N +G R++ + +L F FL+ S P ++ + +++S + + Sbjct: 198 TWNTLGMRASGSHDLLLEEVFVPDEFLIIP-KESQAPANSGRVW-----SALTLSAIYLG 251 Query: 332 LAEA-----IHYARRRHVS--GGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 +A+A + + + R S G + + ++ A+ +IA DI A A + + Sbjct: 252 IAKAAQEFIVDFCKNRIPSALGKPIAELEHVQHALGEIAADIRIAEITLETTAKRWTQNI 311 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 ++ + +TKY C A V +AM GGS ++ + R++R++ A Sbjct: 312 PIRDKISGD---VALTKYTCTNCAVKVTDKAMRIAGGSALSKKLPLERYFRDARA 363 >gi|121707134|ref|XP_001271742.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] gi|119399890|gb|EAW10316.1| acyl-CoA dehydrogenase, putative [Aspergillus clavatus NRRL 1] Length = 542 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D+A +T + + +DG Y ++G K ++++ + + A G G Sbjct: 266 ICLAITEPDAGSDVANLTCEAKLSADGKHYIVNGEKKWITNGIWSDYFTTAVRTGGPGMN 325 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL + S G+ +R+ + G S+ T + F + L+G N + K Sbjct: 326 GISVLLIERSAGGVSTRRMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 378 Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +++ + I V RV E++ YA +R G LID PV++ +A +A I Sbjct: 379 VIMTNFNHERIGIVIQCVRFARVCYEESVKYAHKRRTFGKKLIDHPVIRMKLAHMARQIE 438 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARI---------MAPITKYWCCKMAPAVIAEAMEC 418 A L N + +S E A ++ A T +C + A + Sbjct: 439 ATYNW---LENIIYQCQSMEETEAMLKLGGAIAGLKAQATTTFEFCAREASQIFGGLSYS 495 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G + R YR+ A +I GS M+ Sbjct: 496 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 524 >gi|109080651|ref|XP_001096354.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 2 [Macaca mulatta] Length = 423 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 51/297 (17%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K D Y L+G Sbjct: 147 EKYLPKLTSGEY--------------IGALAMSEPNSGSDVVSMKLKAEKKGDH-YVLNG 191 Query: 231 HK-WFLSSPMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR 282 +K W + P +D I+ A+ + + F+V E G P G + +K+G R Sbjct: 192 NKSWITNGPDADVLIVYAKTDLAATPASRGITAFIV----EKGMP-GFSTSKKLDKLGMR 246 Query: 283 SNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAE 334 + T EL F + +LG N ++ LD + ++G M+ L Sbjct: 247 GSDTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDH 301 Query: 335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYAR 394 I Y R G + +M+ +AD+ + A + +A + DE +++ A Sbjct: 302 TIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVI 361 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 362 L-------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|291239179|ref|XP_002739510.1| PREDICTED: Medium-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Saccoglossus kowalevskii] Length = 428 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 31/259 (11%) Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE--------GRV 253 TE GG+D+A + + + D Y ++G K W + ++ + +LA+ + G Sbjct: 165 TEPGGGSDVARMCTFAENKGDH-YVINGQKMWITNGGKANWYFVLARTDPDLKRPASGAF 223 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V R +P R + +G R + T + F + ++ NV G + K Sbjct: 224 TGFIVDRDTPGVTPG-----RKELNMGQRCSDTRGITFEDV---VVPKENVLLGEGDGFK 275 Query: 314 I-LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + D ++ V LA EA YA R G ++ + +A++A+ I Sbjct: 276 IAMAAFDRTRPPIAAGHVGLAQRAFDEATKYALERKTMGKVIAQHQAVAFMLAEMAIGIE 335 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + ++ +D+ + A+ I K W +A +A++ GG GY E Sbjct: 336 TSRLAIYKCCWEYDQGHKNTYSAS-------IAKAWAADVANKCATDAVQIFGGYGYNSE 388 Query: 428 RSIARHYRESPANSILLGS 446 S+ + R++ A I G+ Sbjct: 389 YSVEKLMRDAKAFQIYGGT 407 >gi|41407811|ref|NP_960647.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396165|gb|AAS04030.1| FadE20_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 30/287 (10%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231 + W PKI S E + + +TE G+D+ ++ + ++ D Y ++G Sbjct: 115 RRWLPKIISGE-------------AVLAIAMTEPGTGSDLQSVKTTARRDGD-FYVINGS 160 Query: 232 KWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPN--GLCYQRLKNKIGNRSNATVE 288 K F+S+ D +++A+ + G V ++ + N G R+ K+G + T E Sbjct: 161 KTFISNGTHCDLLVIVAKTDPSKGAAGVSLIVAETDENLAGFERGRVLAKMGQHAQDTRE 220 Query: 289 LEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRH 343 L FS+ LLG G + M+ L L A + + V++ EAI Y+R R Sbjct: 221 LFFSDMRVPVANLLG-AQEGLGFYQLMEQLARERLIIATICEALAEVAVLEAIKYSRERE 279 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 G +P+ K L AL+ + D A + + A + K + Sbjct: 280 AFG-----RPIGKFQHTKFVLAECKTEALAIK--TMVDYAVGQYLDGKNDPATASMAKLF 332 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 + + ++ + ++ GG GY+ E IA Y S N I G+ M Sbjct: 333 AAEKSDQIVDKCLQIFGGYGYMTEYPIANMYTASRVNRIYGGTSEIM 379 >gi|12836655|dbj|BAB23751.1| unnamed protein product [Mus musculus] Length = 424 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + V Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 P ++E G P G + +K+G R + T EL F + + NV + + Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +L+ LD + ++G M+ L I Y R G + +M+ +AD+ Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ + +A + DE ++ A + + + A V + ++C+GG+GYI Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 + + R R++ I G+G + V Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410 >gi|23098125|ref|NP_691591.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] gi|22776350|dbj|BAC12626.1| acyl-CoA dehydrogenase [Oceanobacillus iheyensis HTE831] Length = 392 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 109/289 (37%), Gaps = 57/289 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML---------AQV 249 +TE G+D I + DG + L+G K F++ F+M+ + Sbjct: 126 FAMTEPGAGSDTQNIKMTA--VKDGSEWVLNGEKTFITGGNEADFVMVIAITDKELHQKT 183 Query: 250 EGRVG--CFLVPR----------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGF 297 +GR G CF+ R + + P L ++ V + N G Sbjct: 184 KGREGVTCFIADRDMGWESEYIHTMGEWGPASLFFE------------NVRIPEKNILGE 231 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQ 352 L N+ L ++ A V V AE AI Y++ R G + ++ Sbjct: 232 LHKGYNLG---------LEWIGFARWIVGARAVGTAERLLQMAIDYSKERETFGKPISER 282 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ IAD A+++ AA L A + D+ + R +A I K + M V+ Sbjct: 283 QAIQWQIADSAVEVEAARWLVLNAAFTLDQGEDN-------RHLASIAKLYGANMGTRVV 335 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 M+ GG GY E I R YRE+ I G+ L + L KG Sbjct: 336 DRVMQIHGGMGYTRELPIERWYREARLWRIYDGTDEIQRLIISRNLLKG 384 >gi|12857011|dbj|BAB30859.1| unnamed protein product [Mus musculus] Length = 424 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G+K W + P +D ++ A+ + V Sbjct: 163 LAMSEPNAGSDVVSMKLKAEKKGDH-YVLNGNKFWITNGPDADILVVYAKTD----LTAV 217 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 P ++E G P G + +K+G R + T EL F + + NV + + Sbjct: 218 PASRGITAFIVEKGMP-GFSTSKKLDKLGMRGSNTCELVFEDC---KVPAANVLSQESKG 273 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +L+ LD + ++G M+ L I Y R G + +M+ +AD+ Sbjct: 274 VYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTR 333 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A+ + +A + DE ++ A + + + A V + ++C+GG+GYI Sbjct: 334 LMASRQYVYNVAKACDEGHIIPKDCAGVIL-------YAAECATQVALDGIQCLGGNGYI 386 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 + + R R++ I G+G + V Sbjct: 387 NDFPMGRFLRDAKLYEI--GAGTSEV 410 >gi|312221968|emb|CBY01908.1| similar to glutaryl-CoA dehydrogenase [Leptosphaeria maculans] Length = 426 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 19/252 (7%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 M K + GLTE G+D ++ ++ G Y LSG K W +SP++D ++ A Sbjct: 153 MAKGQLLGCFGLTEPNHGSDPGSMETVARPHPTKKGYYSLSGSKTWITNSPIADVLLVWA 212 Query: 248 QVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDL 302 ++E G++ F+V R + P L +KNK G R++ T ++ + + + ++ Sbjct: 213 KLESTGKIRGFVVER--DQCPPGTLETPAIKNKNGLRASITGMIQLDDCPVSEANMFPEI 270 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA-RRRHVSGGILIDQPVMKRAIAD 361 GP + Y A ++ + ++ YA R+ G + ++++ +AD Sbjct: 271 EGLRGPFSCLNSARY-GIAWGTIGALEDCISRTRQYALDRKQFKGNPIAKYQLVQKKLAD 329 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 D A + ++ DE K+ E M + K C A E GG Sbjct: 330 ATTDAAYGILAAHQVGRLKDEGKASPE-------MISMIKRQNCDRALVNARTLQEVFGG 382 Query: 422 SGYIEERSIARH 433 + +E I RH Sbjct: 383 NAVSDEYGIGRH 394 >gi|254466164|ref|ZP_05079575.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium Y4I] gi|206687072|gb|EDZ47554.1| acyl-CoA dehydrogenase family member 8 [Rhodobacterales bacterium Y4I] Length = 379 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 55/335 (16%) Query: 143 MAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGL 202 MA G +S M+ + + W P + S M+K L Sbjct: 78 MADPAVGSFLSIHNMCGGMIDKFGSAETKQKWLPSLCS----------MEKI---FSYCL 124 Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLVP 259 TE G+D AA+ ++ ++ +DG Y L+G K F+S SDA++++ + +G G V Sbjct: 125 TEPGSGSDAAALKTRAERTNDG-YSLNGTKAFISGGSYSDAYVVMCRTGEDGPKGISTV- 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 ++EDG+P GL + L++K+G ++ T +++F + L+G E+ K Sbjct: 183 -VVEDGNP-GLSFGALEDKMGWKAQPTSQVQFDDCAIPADHLIG---------EEGKGFS 231 Query: 317 YLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 Y A+ + G R++++ + + Y R G + ++ +A+ Sbjct: 232 Y---AMAGLDGGRLNISAGALGGAQAALDQTVQYMSERKAFGKSINQFQALQFRLAEYET 288 Query: 365 DIAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA + A D A ++ A A++M T + V ++ GG G Sbjct: 289 RLQAARTFLRQAAWKLDTGAHDATKFCAMAKLMVTDTAF-------DVANGCLQLHGGYG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458 Y+ + + + R+ + IL G+ M L V L Sbjct: 342 YLADYGVEKIVRDLRVHQILEGTNEIMRLIVARQL 376 >gi|297189978|ref|ZP_06907376.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|197718635|gb|EDY62543.1| acyl CoA dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] Length = 385 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 21/262 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV------EG 251 + +TE G+D+A I + + DG + L+G K F++ + +D +++ + Sbjct: 124 IAMTEPGAGSDLAGIKTSARLSEDGTHWILNGAKTFITGGVHADRVLVVCRTSPAPAENR 183 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGP 308 R+G L L+ D G R KIG R++ T EL FS+ LLG+ + Sbjct: 184 RLGLSL---LVVDAHAEGFAVGRKLEKIGLRTSDTAELSFSDVKVPVEDLLGEEGNAFSY 240 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + ++ L I + + R ++ A+ Y R+R V G + K +A+ A ++ A Sbjct: 241 LSENLVVERLFIGISATASARAAIDFALEYTRQREVFGKSVASFQNTKFVLAECAAEVEA 300 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A ++ R D + +AA R+ K + ++A VI + ++ GG GYI E Sbjct: 301 AQVMTDRALELHDVGALTAADAA--RL-----KLFTTEVAGRVIDKCLQLHGGYGYILEY 353 Query: 429 SIARHYRESPANSILLGSGNAM 450 IAR Y ++ + I G+ M Sbjct: 354 PIARLYADTRVSRIYAGTNEVM 375 >gi|167768304|ref|ZP_02440357.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1] gi|167709828|gb|EDS20407.1| hypothetical protein CLOSS21_02860 [Clostridium sp. SS2/1] gi|291560280|emb|CBL39080.1| butyryl-CoA dehydrogenase [butyrate-producing bacterium SSC/2] Length = 380 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 36/261 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLA------QVEGRV 253 LTE G+D A + I +G Y L+G K F+++ P++D ++++A + +G + Sbjct: 125 LTEPDAGSDAAGCKTTA--IWNGKEYILNGLKCFITNGPLADYYMVVALTNPELKTKG-L 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 F+V R E G+ ++++K G R E+ F N +LG+ G Sbjct: 182 TAFIVEREWE-----GVSIGKIEDKCGIRCAQVSEVIFDNVRVPKENMLGE--EGKGFAV 234 Query: 311 DMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALD 365 MK L D + V+ + +A+ A +Y + R G L + +A++ + Sbjct: 235 AMKDL---DGGRIGVAAQGLGIAKGAYDIAFNYLKEREQFGKPLYKNQYLAFKMAELETE 291 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I A + ++ A E +S S AA A+++ C A V EA++ +GG+GY+ Sbjct: 292 IEMAQYMLYKAATDKQEGRSYSVPAAKAKMV-------CTDAAMHVATEAVQMLGGNGYM 344 Query: 426 EERSIARHYRESPANSILLGS 446 +E + R R++ I G+ Sbjct: 345 KEYHVERMLRDAKITQIYEGT 365 >gi|121636127|ref|YP_976350.1| putative acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988600|ref|YP_002643287.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|121491774|emb|CAL70236.1| Probable acyl-CoA dehydrogenase fadE3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771713|dbj|BAH24519.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] Length = 388 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 36/284 (12%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236 R Y P PM + + LTE GG+D+ +++ G + S G+ W + Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + S F +L + + PR L+E G GL R K+G + + EL Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216 Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHV 344 F N +LG + G + MK L + A ++ +L +++ YA++R Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRES 275 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + +AD+A + AA L+ A +D + EA A++ A Sbjct: 276 FGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA------- 328 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++A + A+ GG GY E + R++R+SP ++LG G Sbjct: 329 SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDSPL--MILGEGT 370 >gi|46198844|ref|YP_004511.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27] gi|55980861|ref|YP_144158.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8] gi|46196467|gb|AAS80884.1| acyl-CoA dehydrogenase [Thermus thermophilus HB27] gi|55772274|dbj|BAD70715.1| acyl-CoA dehydrogenase [Thermus thermophilus HB8] Length = 577 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 40/269 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D A ++ DG Y L+G K W ++ + F + A+V+G FLV Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFLV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R GL + + K+G ++++T ++ +L D+ V PVE++ I Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I +V G + +L + YA +R G + ++++ + ++A Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMAS 311 Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417 I AA + +R DEA + EA A I A I K ++ V+ E ++ Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E I R YR++ N I G+ Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400 >gi|331011702|gb|EGH91758.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 333 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 31/209 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLRTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLE--DGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L DGS N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGSIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPPNKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 L +A+ ++ V+ + YAR R Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDR 321 >gi|324515461|gb|ADY46208.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum] Length = 303 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 31/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253 +TE G+D+AAI ++ +K D Y ++G K W + F +LA+ E G+ Sbjct: 37 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYAKWFFVLARTETDPKTPAGQA 95 Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V DG G+ + + +G R + T + F + ++ NV P Sbjct: 96 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 147 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + D+ V+ V LA EA YA R G + + +AD+A+++ Sbjct: 148 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 207 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A +++R A D K RS A I K + A A A++ +GG+G+ Sbjct: 208 ELARLVTYRAAVDVDN-KERSS------YYASIAKCFAADTANITAANAVQILGGNGFNS 260 Query: 427 ERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 261 EYPVEKLMRDAKIYQIYEGT 280 >gi|306844215|ref|ZP_07476808.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1] gi|306275490|gb|EFM57227.1| Acyl-COA dehydrogenase, short-chain specific [Brucella sp. BO1] Length = 385 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 24/259 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ + D Y ++G K F+S S D ++ + + G G + Sbjct: 130 LTEPGSGSDAAALKTRAVRDGDH-YIVNGAKQFISGAGSTDLYVTMVRT-GEDGPKGIST 187 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 L+ GL + + K+G + T + F N LGD V KI + Sbjct: 188 LVVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVG------FKIAMA 241 Query: 317 -----YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ A S+ G + + A+A+ Y R G + ++ +AD+ ++AA+ Sbjct: 242 GLDGGRLNIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRM 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L + A+ D ++ +A MA K + M V EA++ +GG GY+ + I Sbjct: 302 LLYTAASKLDR---KTHDAGKWSAMA---KRFVTDMGFNVANEALQLLGGYGYLHDYGIE 355 Query: 432 RHYRESPANSILLGSGNAM 450 + R+ + IL G+ M Sbjct: 356 KLVRDLRVHQILEGTNEIM 374 >gi|293603226|ref|ZP_06685658.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292818358|gb|EFF77407.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 26/303 (8%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 ++LM + + + + P++ Q ++A L+E G+D+AA+ + K+ Sbjct: 109 ISLMGSDELRQRYLPRV------------AQGQAIA-AFALSEPDAGSDVAALACEA-KL 154 Query: 222 SDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 Y L+G K W + ++D +++ A+ G + + D G I Sbjct: 155 DGDHYVLNGAKTWISNGGIADFYVVFARTGEAPGARGISAFVVDADTPGFEVSERIELIA 214 Query: 281 NRSNATVELEFSNT-FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHY 338 AT+ + LG+ + M + I+ S + G R +L E + Sbjct: 215 PHPLATITFDNCRVPLSHRLGEAGQGF-KLAMMTLDIFRASVAAAALGFARRALDEGLAR 273 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS-EEAAYARIMA 397 A+ R + G L D + + A+ D+A I A+ L++R A D K R+ EAA A++ A Sbjct: 274 AKSRRMFGQTLADLQLTQAALGDMATAIDASALLTYRAAWMRDVQKLRTTREAAMAKMTA 333 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 + A VI A++ GG+G + + + YRE A I G+ L + Sbjct: 334 -------TESAQTVIDRALQMFGGAGVVSGMPVEKLYREIRALRIYEGATEVQKLIIARE 386 Query: 458 LEK 460 L K Sbjct: 387 LLK 389 >gi|18313385|ref|NP_560052.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] gi|18160916|gb|AAL64234.1| acyl-CoA dehydrogenase [Pyrobaculum aerophilum str. IM2] Length = 380 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 36/278 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR------ 252 L+E G+D AAI + + G + ++GHK W + +D +++ A+ R Sbjct: 122 FALSEPCCGSDAAAIQTAAVR-RGGEWVINGHKMWITNGHYADYYLVAARTGPREARHKA 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGF---LLGDLNVSTGP 308 + FL+ R C + + ++ G R T E++F+N ++G++N Sbjct: 181 ITVFLLKR--------SNCVETSQIEVMGVRGTGTAEVKFNNCAASDDDIVGEVNGGWKV 232 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + D L+ ++SG+ V +A EA+ +AR R + LI+ + +A++ Sbjct: 233 IVDT-----LNVGRTAISGVTVGIARGAFEEALKWARNRELFDRKLIEFQNTQFELAEMY 287 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A L++ A +D + IM+ + K ++A V A++ GG G Sbjct: 288 ASIETARTLAYYAAYLYDI------NSPGFLIMSHVAKLQTARIAVDVTRRAVQIEGGFG 341 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 Y +E YR++ I G+ M + L+EKG Sbjct: 342 YSKESKAEMFYRDAKILEIGEGTNEVMKYVIYKLIEKG 379 >gi|296156721|ref|ZP_06839559.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] gi|295893320|gb|EFG73100.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1] Length = 377 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVG--C 255 LTE + G++ + ++ + DG + L+G K F+++ ++ I+ A + G+ G Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGARANVAIVFAVTDPDRGKRGLSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G + ++K+G R++ T + + + + N+ P E ++I Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L L+ + ++ + +A A YA R G L + + +AD+A + AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDAARLYANERIQFGKALKEHQTIANMLADMATRLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A E K EA+ A++ A ++A + + A++ GG GY+E+ + Sbjct: 296 RLLVHHAARLRTEGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|163752168|ref|ZP_02159372.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] gi|161327945|gb|EDP99121.1| acyl-CoA dehydrogenase family protein [Shewanella benthica KT99] Length = 421 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 31/209 (14%) Query: 152 MSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P +T + A+ + + + + K+ S E+ T + LTE GT Sbjct: 117 MYPGLTHGAYAAIHAHGSDALKQKYLKKLVSGEWTGT-------------MNLTESHAGT 163 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV----EGRVGC--FLV 258 D+A + ++ + +G + +SG K F+SS D +MLA++ EG G F V Sbjct: 164 DLALLRTKAVEAGEGRFAISGEKIFISSGDHDLAENIIHLMLARLPDAPEGVKGISLFAV 223 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+++ + G N LC L++K+G N+T + F G L+G+ + + M Sbjct: 224 PKIMVNADGSLGEANSLCAAALEHKMGIHGNSTCVMNFDAAIGELIGEPHQGLKAMFTMM 283 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 L + + ++ A+ YA+ R Sbjct: 284 NQARLGVGVQGLGVSEIAYQNALAYAKDR 312 >gi|73537981|ref|YP_298348.1| butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] gi|72121318|gb|AAZ63504.1| Butyryl-CoA dehydrogenase [Ralstonia eutropha JMP134] Length = 388 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 33/265 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D+A I+ + + D + ++G+K++ + FI+ V R + P+ Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGNKYWCTFADEADFIL---VICRTDPVIDPKA 178 Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEF-------SNTFGFLLGDLN 303 G P G + +K KIG T EL F S G Sbjct: 179 RHKGLSAFMVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDGCRVPHSKMVGEEGKAFY 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++T +E + +A S+ + SL ++I YA+ R+ G + + ++ IAD+A Sbjct: 239 LTTAGLETARA----HTAARSIGLAQGSLEDSIQYAKGRNQFGNPIGNFQAIRFKIADMA 294 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A+ AL + + DE EA+ ++ A +M V +E ++ GG+G Sbjct: 295 TQIEASRALLYTVCEKIDEGVRADTEASMVKLFA-------SEMCERVTSEGLQIHGGAG 347 Query: 424 YIEERSIARHYRESPANSILLGSGN 448 Y + R++R++ I G+ + Sbjct: 348 YTTHFAAERYWRDARLTKIFEGTSD 372 >gi|66045706|ref|YP_235547.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae B728a] gi|63256413|gb|AAY37509.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae B728a] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGMLDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ +AD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + EA++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|312111285|ref|YP_003989601.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311216386|gb|ADP74990.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 29/270 (10%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T IG LTE G++ + + + D Y ++G K ++++ + F ++A Sbjct: 112 PKMATGEWIGAFALTEPSAGSNATNLKTTAVRKGDR-YIINGSKHYITNARDAHVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304 + G + + + G + + K+G R + + EL F DL V Sbjct: 171 VTDPNKGPKGITSFIVEKDFPGFIIGKTEKKMGLRGSHSCELFFE--------DLEVPVE 222 Query: 305 ------STGPVEDMKILIYLDSAIMS--VSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 G V +KIL + + + + + L +++ YA R G +I+Q + Sbjct: 223 NRLGEEGEGYVNALKILANGRAGLAARNLGSCQYLLDKSVQYAMEREQFGKPIIEQQAIL 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A++I +++R+A D+ + +EAA + K + ++ V A+ Sbjct: 283 HMLADMAMEIETLRWMTYRVAWMTDQGMNVIKEAA-------MVKLYGSEVYNRVADRAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GYI E I R YR++ I G+ Sbjct: 336 QVHGGLGYIAEYPIERFYRDARITRIYEGT 365 >gi|148234611|ref|NP_001086893.1| acyl-CoA dehydrogenase family, member 9 [Xenopus laevis] gi|50416552|gb|AAH77618.1| Acad9-prov protein [Xenopus laevis] Length = 622 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 42/314 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVE--------- 250 LTE G+D A+I S+ DG + L+G K W + ++D F + A+ E Sbjct: 181 LTEPGSGSDAASIQSRATLTPDGKHFLLNGSKIWISNGGLADIFTVFARTEVVDKDGVTK 240 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLN 303 ++ F+V R G+ + + ++K+G R + T EL F NT G + G Sbjct: 241 DKISAFIVERAF-----GGVTHGKPEDKLGIRGSNTCELHFENTKVPVENVIGEVGGGFK 295 Query: 304 VSTGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361 V+ M IL ++ S S G+ L E YA R L D +++ A Sbjct: 296 VA------MNILNSGRFSMGSASAGIIKKLIEMTAEYACTRKQFNKKLSDFQLIQEKFAL 349 Query: 362 IALDIAAATALSFRLANSFDEA--KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 +A ++++ A D S EAA ++ + W C ++EA++ + Sbjct: 350 MAQKAFVMESMAYLTAGMMDRPGLPDCSVEAAMVKVFSS-EGAWLC------VSEALQIL 402 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNA--MVLDVLNLLEKGTNLFEQLFSTLEQDLG 477 GG GY+++ R+ R+S I G+ M + + + G L ++ + ++G Sbjct: 403 GGLGYMKDYPYERYLRDSRILLIFEGTNEILRMYIALTGMQHAGKILTGKIKEMKKGNVG 462 Query: 478 SSGKKVITILRDSI 491 + + LRDS+ Sbjct: 463 VAMELFFKKLRDSM 476 >gi|325122834|gb|ADY82357.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter calcoaceticus PHEA-2] Length = 381 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A ++ +R ++ A Y + RH G + + +A +D A A R Sbjct: 247 -ASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|295695028|ref|YP_003588266.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295410630|gb|ADG05122.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 401 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P K GLTE G+D+AA+ + + +G Y L+G K W + ++D F++ A Sbjct: 114 PQAKGEKLGAFGLTEPGAGSDVAAMQTTAVRDGEG-YRLNGSKIWISLADVADHFLVFAY 172 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP 308 + + + + + G + +K K+G R+ T E+ F + + + + N Sbjct: 173 TDKTKKHHGITAFIVERTWPGFSSRPIKGKLGIRAGNTGEIIFEDLW---VPEENRLGEE 229 Query: 309 VEDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 E KI + LD+ +V+ ++ L ++ Y+ R G + ++++ IA + Sbjct: 230 GEGFKIAMSALDNGRFTVAAGACGTIQACLEASLKYSHERETFGQEIGRHQLVQQMIAKM 289 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ + L ++ ++ + + E + A+ +A C A ++A++ G Sbjct: 290 AANLEISRLLVWKAGWLKNQGQRCTREVSLAKWVA-------CDAAWEAASDAVQIHGAY 342 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY E + R+ R + A I G+ Sbjct: 343 GYSNEYPVERYLRNAKAPVIYEGT 366 >gi|302544872|ref|ZP_07297214.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302462490|gb|EFL25583.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 33/272 (12%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D A + ++ + D Y L+G K W ++ +SD + ++A Sbjct: 121 PLAKGDAMFSYCLSEPDAGSDAAGMKTKAVRDGD-FYVLNGVKRWITNAGVSDYYTVMAV 179 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305 + + + + G+ + + K+G + + T E+ N + D + Sbjct: 180 TDPEKRSKGISAFVVEKDDEGVSFGAPEKKLGIKGSPTREVYLDNV--RIPADRMIGAEG 237 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 TG MK LD ++++ + +A+ A Y + R G + D ++ +A Sbjct: 238 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKPIADFQGIQFMLA 294 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT------KYWCCKMAPAVIAE 414 D+A+ I AA AL+++ A AA R+ A +T K + +A V + Sbjct: 295 DMAMKITAARALTYQAA------------AASERVDADLTFQGAAAKCFASDVAMEVTTD 342 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ +GG GY + + R R++ I G+ Sbjct: 343 AVQLLGGYGYTRDYPVERMMRDAKITQIYEGT 374 >gi|146101225|ref|XP_001469060.1| acyl-CoA dehydrogenase [Leishmania infantum] gi|134073429|emb|CAM72157.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5] Length = 412 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 46/348 (13%) Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170 +PVV K+A + A LE G + P+V+ V + Sbjct: 58 DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 ++A R+Y P + K +V LTE G+D A+ ++ +K + ++G Sbjct: 118 FFNFANDAQRRKYLPK----LAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171 Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K ++++ + F+++A V+ G CF+V + G+ R +NK+G R++ Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETPGVSVVRTENKLGIRAS 227 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 +T EL N + + NV + KI I L+ + + + +A+ + Y Sbjct: 228 STAELRLENV---EVPEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +R G + D M+ A+ A+++ AA + + + + ++AA A Sbjct: 285 LFQRKQFGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ +A + A+E GG G++++ + R YR++ +I G+ Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385 >gi|154250934|ref|YP_001411758.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154154884|gb|ABS62101.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 40/250 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D +AI + K +DG + L G K W ++ ++D FI Q + G C Sbjct: 128 LSEPGAGSDFSAIRTSATK-TDGGWRLDGEKGWITNAGIADLFITYVQTDPAAGWRGIAC 186 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 FLV D G +G + N +L + ++ GP + K+ Sbjct: 187 FLV-----DARRPGFRRAEPYALMGGHAIGAGGFTLEN---YLAPEDDMLAGPGDAFKL- 237 Query: 316 IYLDSAIMSVSGMRV------------SLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 A+ V+G RV SL A+ Y R G L++ + ++ D+A Sbjct: 238 -----AMKGVNGARVYVAAMCAGLLASSLETALAYGAARKTFGKSLLEHQGLNWSLGDVA 292 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 D+ A L+ D + AA+A K + ++ IA+ ++ +G +G Sbjct: 293 NDLEALRGLTLHAGRLIDSGEDAVMAAAHA-------KKFAGRVTLPRIADCIQSMGATG 345 Query: 424 YIEERSIARH 433 EE +ARH Sbjct: 346 LREEHGLARH 355 >gi|148547014|ref|YP_001267116.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas putida F1] gi|148511072|gb|ABQ77932.1| isovaleryl-CoA dehydrogenase [Pseudomonas putida F1] gi|313498060|gb|ADR59426.1| Ivd [Pseudomonas putida BIRD-1] Length = 387 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + Sbjct: 128 LAMSEPNAGSDVVSMKLRAEKRGDH-YVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 + + G +K+G R + T EL F N G L G + V Sbjct: 187 TAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRV------- 239 Query: 312 MKILIYLDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD + +SG M+ + + Y R G + + +++ IAD+ + Sbjct: 240 --LMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQL 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A + +A + D ++ ++AA + + + A + EA++ +GG+GYI Sbjct: 298 NASRAYLYAVAQACDRGETTRKDAAGVIL-------YTAERATQMALEAIQILGGNGYIN 350 Query: 427 ERSIARHYRESPANSILLGS 446 E R R++ I G+ Sbjct: 351 EFPAGRLLRDAKLYEIGAGT 370 >gi|291303360|ref|YP_003514638.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572580|gb|ADD45545.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 616 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 83/378 (21%), Positives = 171/378 (45%), Gaps = 61/378 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S ++D I +LA+ G Sbjct: 164 LTEPDAGSDVGAGRAKAYQQPDGSWHIEGVKRFITSGEHDLTDNIIHYVLARPVGVDGVG 223 Query: 253 ------VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GF 297 + F+VP+ D G NG+ +++K+G + + T EL F G+ Sbjct: 224 GPGTKGLSLFVVPKFHFDAETGELGDRNGVYATNVEHKMGLKVSTTCELTFGEKHPAKGW 283 Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYARRRHVSGGILI---- 350 L+G+ + + M ++I ++ +++ + A+ YA+ R V G L+ Sbjct: 284 LMGEKHEG---IRQMFLIIEYARMMVGSKAIATLSTGYLNALEYAKSR-VQGADLLRSTD 339 Query: 351 ---------DQP------VMKRAIADIALDIAAATAL---SFRLANSFDEAKSRSEEAAY 392 + P +M+++ A+ + TA R+A +A++ A Sbjct: 340 KSAPRVTITNHPDVRRSLLMQKSYAEGLRALVCYTASWQDKQRIAEDAGDAETEKLAARV 399 Query: 393 ARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + ++ PI K + A +++ E+++ GGSG++++ I ++ R+S +++ G+ Sbjct: 400 SDLLLPIIKGCGSERAYELLSSESLQTFGGSGFLQDYPIEQYVRDSKIDTLYEGTTAIQS 459 Query: 452 LDVL--NLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGLARFLTEKIA 509 LD L +++ G + + + Q LG+ G + + +R S+ E+ A + A Sbjct: 460 LDFLFRKIVKDGGVALGTVATEIGQWLGADGPESLKGIRASLGEALEN-AQAMLGSLGTA 518 Query: 510 LASSAAA----LYRAGMN 523 L +S LY+AG++ Sbjct: 519 LGASQQGQPRELYKAGLH 536 >gi|119898221|ref|YP_933434.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119670634|emb|CAL94547.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 393 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T +G GLTE G+D ++ ++ +K+ G Y +SG K W + Sbjct: 114 FGTEAQKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMITRAKKVPGG-YSISGAKMWITN 172 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG + F +LE G GL + K+G R++ T E+ F Sbjct: 173 SPIADVFVVWAKDDEGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 227 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347 + GP L+SA ++ + AEA + Y R G Sbjct: 228 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 281 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I ++ D + E + I K C Sbjct: 282 PLAANQLVQKKLADMLTEITLGLQACLQVGRLKDAGNAPVE-------ITSIIKRNSCGK 334 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 335 ALDIARTARDMLGGNGISDEFCVARH 360 >gi|323360059|ref|YP_004226455.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] gi|323276430|dbj|BAJ76575.1| acyl-CoA dehydrogenase [Microbacterium testaceum StLB037] Length = 386 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 30/253 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS--DAFIMLAQVEGRVG-- 254 G GLTE G+D A T ++ G + + G K F+++ + F+ + V GR G Sbjct: 126 GFGLTEAEAGSDAGA-TRTTARLEGGEWVIDGSKQFITNSGTAITRFVTVTAVTGRTGER 184 Query: 255 ----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 +VP +G+P G +K+G ++ T L F G + + N+ + Sbjct: 185 PEISTIIVP----NGTP-GFTVGPAYDKVGWNASDTHPLTFD---GVRVPEANLLGERGQ 236 Query: 311 DMK-ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 K L LD ++++ + AE A+ YAR R V G L + ++ +A + Sbjct: 237 GFKNFLRTLDEGRVAIAALATGAAEGCLEAAVDYARSRTVFGERLSTRQSIQFLLARMHA 296 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A A D K S +AA A++ A A A +A + GG+G+ Sbjct: 297 RVHTARLAWVHAARLCDAGKPFSVDAAVAKMTA-------SDAAMANARDATQVFGGNGF 349 Query: 425 IEERSIARHYRES 437 I E +ARHYR+S Sbjct: 350 INEYPVARHYRDS 362 >gi|260901259|ref|ZP_05909654.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037] gi|308106805|gb|EFO44345.1| isovaleryl-CoA dehydrogenase 2 [Vibrio parahaemolyticus AQ4037] Length = 389 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 24/275 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + P +D ++ A+ + G + Sbjct: 130 LAMSEVNSGSDVVSMQLKAEDKGDH-FLLNGTKMWITNGPDADVVVVYAKTDADAGSRGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + S G + +K+G R + T EL F+N +LG LN VE + Sbjct: 189 TAFIVERSFTGFSDAQKLDKLGMRGSNTSELVFNNCKVPKENILGALNCG---VEVLMSG 245 Query: 316 IYLDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + +++ M+ + + Y R G + + +++ +AD+ + AA A Sbjct: 246 LDYERVVLAAGPLGIMQACMDIVVPYVHERKQFGKSIGEFQLVQGKLADMYSRMNAAKAY 305 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D + ++AA + + ++A + +A++ +GG+GYI E + R Sbjct: 306 VYTVAAACDRGECTRKDAAGVIL-------YSAELATQMALDAIQLLGGNGYINEYATGR 358 Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R++ I G+G + + +L G LFE+ Sbjct: 359 LLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|303279086|ref|XP_003058836.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459996|gb|EEH57291.1| predicted protein [Micromonas pusilla CCMP1545] Length = 445 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 47/286 (16%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D+A I ++ +DG Y +SG K ++++ + + +A G G Sbjct: 157 ICLCITEPWAGSDVANIRCVAKRSADGTKYVVSGEKKWITNGIWADYFTVAVRTGGPGMG 216 Query: 257 LVPRLLEDGSPNGLCYQRL----------------------KNKIGNRSNATVELEFSN- 293 + L+ + + G+ +R+ +N IG + A L +S+ Sbjct: 217 GISLLVVEKTMKGVETKRMDCMGVWASGTTFVTFDDVEVPAENLIGEENQARSILHWSSY 276 Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 F +++ + N + + RV EA YA RR G LI+ Sbjct: 277 DRGFKYVMHNFNHER-----------WGFVVQANRFARVCYEEAFKYAHRRRTFGKKLIE 325 Query: 352 QPVMKRAIADIALDIAAATAL----SFRLANSFDE--AKSRSEEAAYARIMAPITKYWCC 405 PV++ +AD+A I A A+ ++++ E AK+ + A A++ A +C Sbjct: 326 HPVIRAKLADMARQIDATHAMMETITYQMCTMTREESAKALAGVTALAKVQATKVFEYCA 385 Query: 406 KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + A + A GG G + R YR+ A +I GS M+ Sbjct: 386 REAAQIFGGASYTRGGVG----EKVERLYRDVRAYAIPGGSEEIMM 427 >gi|188036192|pdb|2Z1Q|A Chain A, Crystal Structure Of Acyl Coa Dehydrogenase gi|188036193|pdb|2Z1Q|B Chain B, Crystal Structure Of Acyl Coa Dehydrogenase Length = 577 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 40/269 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D A ++ DG Y L+G K W ++ + F + A+V+G FLV Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFLV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R GL + + K+G ++++T ++ +L D+ V PVE++ I Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I +V G + +L + YA +R G + ++++ + ++A Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMAS 311 Query: 365 DIAAATALSFRLANSFDEA--KSRSEEAAYARIM-----APITKYWCCKMAPAVIAEAME 417 I AA + +R DEA + EA A I A I K ++ V+ E ++ Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E I R YR++ N I G+ Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400 >gi|115387881|ref|XP_001211446.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195530|gb|EAU37230.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 436 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 19/303 (6%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A TP + W P++ K + LG+TE G+D+A I + ++ Sbjct: 133 IARFGTPEQRRRWLPEV-------------AKGDIRFCLGITEPDAGSDVANIRTTAKRE 179 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 D Y ++G K ++++ + + A G G + L+ + G+ +R+ N N Sbjct: 180 GDH-YVVNGSKKWITNGIWADYCTAAVRTGGPGRSGISLLVVPLTAPGVTRRRMYNSGVN 238 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 S +T +EF + L+G+ N + L A S+ RV +A +Y Sbjct: 239 ASGSTF-IEFDDVRVPVDHLIGEENKGFALIMSNFNPERLSLACASLRLARVCAEDAFNY 297 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A +R G LI + ++ I L I A A +L + + K R + M Sbjct: 298 AVQRETFGSPLIQRQAIQAKIFKFGLMIEPAYAFMEQLVHIIELTKDRPVDDVRIGGMTA 357 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES-PANSILLGSGNAMVLDVLNL 457 + K + + EA + +GG+GY + AR + S A ++G G+ ++ L L Sbjct: 358 LLKVMSTRALEKSVREAQQILGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMMGLAL 417 Query: 458 LEK 460 E+ Sbjct: 418 QEE 420 >gi|291301369|ref|YP_003512647.1| acyl-CoA dehydrogenase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570589|gb|ADD43554.1| acyl-CoA dehydrogenase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 380 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 44/303 (14%) Query: 170 VHKDWAPKIFSREYDPTNK----APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG- 224 VH D A SR K + + + + ++E G+D+ I + + DG Sbjct: 90 VHNDMAVPYLSRLATEEQKDRWFSGLCAGELIAAIAMSEPGAGSDLQGIATTA--VRDGE 147 Query: 225 IYCLSGHKWFLSSPM-SDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNK 278 Y L+G K F+++ + +D I+LA+ + F V R +E G R +K Sbjct: 148 DYVLNGQKTFITNGIHADLVIVLARTDPEAAHLGFSLFAVERGME-----GFERGRKLDK 202 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV--EDMKILIYLDS---------AIMSVSG 327 IG R+ T EL F+ D+ + + E+ K IYL A++ +G Sbjct: 203 IGMRAQDTAELFFN--------DVRIPAANLVGEEGKGFIYLMEGLPRERLAIAVVGQAG 254 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 E + Y R R G + ++ +A++ ++ + + + + Sbjct: 255 AEAVFDETVEYVRGRKAFGRNIGKFQHVRMTMAEMKTELHIGRTFVDQCMLALNAGELDV 314 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 EAA ++K+W +M V + ++ GG GY+ E IA+ Y ++ A +I G+ Sbjct: 315 TEAA-------MSKWWITEMQKRVTDQCLQLHGGYGYMSEYPIAQAYLDTRAQTIYGGTT 367 Query: 448 NAM 450 M Sbjct: 368 EIM 370 >gi|115495621|ref|NP_001069019.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] gi|116242943|sp|Q0NXR6|ACAD8_BOVIN RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName: Full=Acyl-CoA dehydrogenase family member 8; Short=ACAD-8; Flags: Precursor gi|90658380|gb|ABD97096.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus] gi|90658382|gb|ABD97097.1| acyl-coenzyme A dehydrogenase member 8 [Bos taurus] gi|119223979|gb|AAI26751.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Bos taurus] Length = 416 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 38/266 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + + D Y L+G K F+S +D ++++ + G + C Sbjct: 161 LTEPGSGSDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCV 219 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304 +V E G+P GL + + + K+G S T + F + GFL+ + Sbjct: 220 VV----EKGTP-GLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGL 274 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + G + + A S+ S+ A Y + R G L + ++ +AD+A Sbjct: 275 NGGRI---------NVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAA 325 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ L R A A + EE A ++ + K + A+ +A++ GG GY Sbjct: 326 RLVASR-LMIRTA-----ATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGY 379 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 +++ ++ ++ R+S + IL GS M Sbjct: 380 LKDYAVQQYVRDSRVHQILEGSNEVM 405 >gi|83748534|ref|ZP_00945555.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|207742117|ref|YP_002258509.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83724838|gb|EAP71995.1| Isovaleryl-CoA dehydrogenase [Ralstonia solanacearum UW551] gi|206593505|emb|CAQ60432.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 393 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 17/308 (5%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S + ++ + H + R P KA P + +G L ++E Sbjct: 75 HMIAMEEISRASASVGLSYGAHSNLCVNQLHRNGTPAQKARYLPKLVSGDWVGALAMSEP 134 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + ++ D Y L+G K W + P D ++ + E +G + + + Sbjct: 135 NAGSDVVSMKLRAERRGD-RYVLNGTKMWITNGPDCDVLVVYGKTEPELGARGMTAFIVE 193 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSA 321 G + +K+G R + T EL F N +LG+ N T + M L Y + A Sbjct: 194 KGMKGFSVAQKLDKLGMRGSHTGELVFDNVEVPVENVLGEENGGTRVL--MSGLDY-ERA 250 Query: 322 IMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++S + M+ + Y R G + + +++ IAD+ + A A + + Sbjct: 251 VLSGGPIGIMQACMDVVTPYIHDRKQFGQSIGEFQLIQGKIADMYTTLQACRAYLYTVGK 310 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D A R + A + Y + A + EA++ +GG+GYI E R +R++ Sbjct: 311 NLD-ALGREHVRQVRKDCAGVILY-TAEKATWMAGEAIQILGGNGYINEFPTGRLWRDAK 368 Query: 439 ANSILLGS 446 I G+ Sbjct: 369 LYEIGAGT 376 >gi|254254420|ref|ZP_04947737.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158] gi|124899065|gb|EAY70908.1| hypothetical protein BDAG_03718 [Burkholderia dolosa AUO158] Length = 377 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPQAGSEAHNLRTRAE-LRDGKWVLNGAKQFVTNGQRAGIAIVFAMTDPEAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 F+VP G + + K+G R++ T + N LLG+ L ++ Sbjct: 184 FIVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCAIPEENLLGNRGEGLKIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G L + +++ +AD+A I A Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPLAEHQAIQQKLADMATQINA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 EVERHYRDARITQIYEGT 365 >gi|321461401|gb|EFX72433.1| hypothetical protein DAPPUDRAFT_110684 [Daphnia pulex] Length = 392 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 33/288 (11%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP- 238 ++Y P A + +++A +TE G+D+ I S +K DG Y L+G K F+++ Sbjct: 115 QKYIPDMTAGKKISAIA----MTEPDAGSDLQGIKSFARK--DGSDYILNGSKMFITNGW 168 Query: 239 MSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 ++D +++A E + + L D G L KIG ++ T L F + Sbjct: 169 LADVVVVVAVTNKEAKSAAHGISLFLVDADTPGFKKSWLMKKIGMGASDTAGLFFEDVRL 228 Query: 295 -FGFLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGG 347 LLG+ N ++ P E + I + + + E Y +R G Sbjct: 229 PASALLGEENKGFYYLMNELPQERLTI------GVHACAHSEFMFEETKQYVMQRKAYGK 282 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L + ++ +A++ +I A A D+ + EE MA + K W ++ Sbjct: 283 TLSNLQTIQHKLAEMKTEICVARAF-------IDQCIALHEEQQLDAQMACMAKIWASEL 335 Query: 408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + A+ ++ GG+GY+ + IAR Y ++ +I GS N ++ D++ Sbjct: 336 ENKIAAQCLQLHGGAGYLYDTPIARAYLDARVQTIYGGS-NEVLKDLI 382 >gi|306415525|gb|ADM86729.1| acylCoA dehydrogenase [Delftia acidovorans] Length = 562 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 44/331 (13%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 + P + + +++A T + + W P+I S DP +G+ +TE G+D Sbjct: 245 ITRPEILARALLAGGTEEQ-KRHWLPRIASG--DPL-----------VGIAITEPDYGSD 290 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-----GRVGC--FLVPRLLE 263 +A+++ + + G W + + +++A+ + G G LV + Sbjct: 291 VASLSLKATRCPGGWRLDGAKTWCTFAGKAGLLMVVARTDPDRAAGHKGLSLLLVEKPSH 350 Query: 264 DG-------SPNGLCYQRLKNKIGNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDM 312 +G + G R IG R + +L F N F + G+ + G M Sbjct: 351 EGHDFAFGQTGGGRLTGRAIPTIGYRGMHSFDLSFENFFVPDACVVGGEAGLGKGFYFTM 410 Query: 313 KILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ + +A + MR +L A+ YA R V L + + A +A +AA Sbjct: 411 AGMVGGRMQTAARACGVMRAALKAAVRYAGDRKVFAAPLASYTLTQVKFARLAARLAACR 470 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L++ + + ++ + R E A + K + C+ A + EA++ GG GY EE + Sbjct: 471 HLTYAVGHMLEDGRGRME--------ASLVKLFACRSAELISREALQIHGGMGYAEETAA 522 Query: 431 ARHYRESPANSILLGSGNAMVLDVL--NLLE 459 +R++ ++ SI G+ + L V+ +LLE Sbjct: 523 SRYFIDARVLSIFEGAEETLALKVIARSLLE 553 >gi|13472548|ref|NP_104115.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099] gi|14023294|dbj|BAB49901.1| glutaryl Co-A dehydrogenase [Mesorhizobium loti MAFF303099] Length = 398 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 23/243 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D + ++ +K ++G Y LSG K W ++P++D F++ A+++G G + Sbjct: 138 FGLTEPDAGSDPGGMKTRAEKTANG-YKLSGSKMWISNAPIADVFVVWAKLKGETGKDEI 196 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 + + GL ++ K+ R++ T E+ LL + GP Sbjct: 197 RGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMEGVEVGEDALLPNAKGLGGP------F 250 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 251 GCLNRARYGISWGSMGAAEDCWHRARQYGLDRKQFGKPLAGTQLYQKKLADMQTEIALGL 310 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 S R+ D K E M I K C A + +A + GG+G + Sbjct: 311 QASLRVGRLLDAGKMAPE-------MISIVKRNNCGKALDIARQARDMHGGNGIQIGYHV 363 Query: 431 ARH 433 RH Sbjct: 364 MRH 366 >gi|322701978|gb|EFY93726.1| acyl-CoA dehydrogenase, putative [Metarhizium acridum CQMa 102] Length = 441 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 34/324 (10%) Query: 145 QLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTE 204 +L L P + + A P V W K + P ++T +AI TE Sbjct: 111 ELARSGLAGPGASLTAGFAFGIPPIVK--WGSKELKERFLPDFLTGRKRTCIAI----TE 164 Query: 205 KRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQV--EGRVGCFLVPR 260 G+D+A IT+ +K +DG Y ++G KW + SD M + GR G ++ Sbjct: 165 PDAGSDVANITTTAEKSADGKHYIINGAKKWITNGIWSDYTTMAVRTGGPGRAGLSVIIV 224 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY--- 317 L+ G P G+ +RL G ++ T +E N + N+ + ++I++ Sbjct: 225 PLK-GHP-GVSMRRLPVS-GQKAGGTTYIELDNV---KVPVENLVGREGDGLRIILTNFN 278 Query: 318 ---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+ R +L+ A Y +R G L+DQPV++ +A ++ A + Sbjct: 279 HERLIIAVGVTRQARTALSAAFEYCLKRDAFGKKLMDQPVVRHRLAKAGAELETMNAWTE 338 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC----IGGSGYIEERS- 429 ++ KS+ + I A + K + V+ E +C GG+G+ Sbjct: 339 QILYQLCHLKSQEADLKLGGITA-LAK----AKSAMVLNECAQCAVLLFGGNGFTASGQG 393 Query: 430 --IARHYRESPANSILLGSGNAMV 451 + YR+ P I GS + ++ Sbjct: 394 ALVEAIYRDVPGARIPGGSEDVLL 417 >gi|288803247|ref|ZP_06408681.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica D18] gi|288334288|gb|EFC72729.1| acyl-CoA dehydrogenase family protein [Prevotella melaninogenica D18] Length = 577 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 28/291 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVGC 255 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 171 MSMDLTEPDAGSDLQRVMLKATFDEKENCWRLNGVKRFITNGDSDIHLVLARSEEGTRDG 230 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 + + D G+ + +++K+G + T EL + N L G + G ++ ++ Sbjct: 231 RGLSMFIYDKRDGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--SSRMGLIK--YVM 286 Query: 316 IYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A + ++ V L E + YA+ R G +++ P + ++ + + A Sbjct: 287 ALMNGARLGIAAQSVGLEQEAYNEGLAYAKDRAQFGKKIVNFPAVYDMLSRMKAKLDAGR 346 Query: 371 ALSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIA 413 +L ++ A D K+ R E Y R+ P+ K + A Sbjct: 347 SLLYQTARYVDIYKALEDIARDQKLTPEERQEMKKYTRLADAFTPLAKGINSEYANQTAY 406 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 +++ GGSG+I E R YR++ SI G+ V+ + + GT L Sbjct: 407 DSISIHGGSGFIMEYKCQRLYRDARIFSIYEGTTQLQVVAAVRYITNGTYL 457 >gi|218510845|ref|ZP_03508723.1| Acyl-CoA dehydrogenase [Rhizobium etli Brasil 5] Length = 395 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 38/272 (13%) Query: 226 YCLSGHKWFLSSPMSDA-----FIMLAQV-----------EGRVGCFLVPRLLEDGSPNG 269 Y L G+K ++S D ++LA+V EG + F+VP+ L DG+ N Sbjct: 20 YRLVGNKMWISGGDQDVSENIVHLVLAKVAAGNEALPVGTEG-LSLFIVPKYLPDGTRND 78 Query: 270 LCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPVEDMKILIYLDSAI 322 + L +K+G R A L T G+++G L + + +I + L +A Sbjct: 79 IAIAGLNHKMGYRGTANCLLNLGETTGAIGWIVGQPGQGLRQMFQMMNEARISVGLGAAA 138 Query: 323 MSVSGMRVSLAEAIHYARRR--HVSGG---ILIDQPVMKRAIADIALDIAAATAL---SF 374 + G R+S+ A + R V G +I+ +KR + + A AL S Sbjct: 139 VGYRGYRLSVGYANERLQGRPAGVRNGPQVPIIEHSDVKRMLLTQKAYVEGALALCLYSA 198 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 RL + D A S A ++ PITK W + A++ GG GY + + + + Sbjct: 199 RLVDDEDNADS----ANLLGLLTPITKTWPSEYGLLANDIAIQVHGGYGYTRDFDVEQLW 254 Query: 435 RESPANSILLGSGNAMVLDVLN--LLEKGTNL 464 R++ N+I G+ D+L +L GT + Sbjct: 255 RDNRLNTIHEGTTGIQAGDLLGRKILRDGTGM 286 >gi|333024974|ref|ZP_08453038.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] gi|332744826|gb|EGJ75267.1| putative acyl-CoA dehydrogenase [Streptomyces sp. Tu6071] Length = 382 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 21/266 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D A + ++ + D + L+G K W ++ +S+ + ++A Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV---S 305 + + + + S G+ + + K+G + + T E+ F N + D + Sbjct: 175 TDPTKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNV--RIPADRMIGAEG 232 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 TG MK LD ++++ + +A+ A Y + R G + D ++ +A Sbjct: 233 TGFATAMKT---LDHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ I+AA AL+++ A + + + + Y A K + +A V +A++ +G Sbjct: 290 DMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLLG 343 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY + + R R++ I G+ Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369 >gi|310799288|gb|EFQ34181.1| acyl-CoA dehydrogenase domain-containing protein [Glomerella graminicola M1.001] Length = 432 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 40/264 (15%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAI--TSQGQKISDGIYCLSGHK-WFLSSPMSDAFIM 245 P T +G GLTE G+D ++ ++ G Y LSG K W +SP++D ++ Sbjct: 157 PAMATGKMLGAFGLTEPNHGSDPGSMETVARPHPTKKGYYSLSGSKTWITNSPIADVLLV 216 Query: 246 LAQVE--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 A+++ G++ FLV R S L +KNK G R++ T ++ L D Sbjct: 217 WAKLQETGKIRGFLVER--SQCSAGTLETPPIKNKNGLRASITGMIQ--------LDDAP 266 Query: 304 VSTGPVEDMKILIY--------LDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGIL 349 V P E+M + L+SA ++ G+ +L + + AR RR L Sbjct: 267 V---PAENMFPSVEGLRGPFSCLNSARYGIALGVMGALEDCVARARAYALERRQFKNNPL 323 Query: 350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAP 409 ++++ +AD A D A T + ++ DE K+ E M + K C A Sbjct: 324 ARYQLVQKKLADAATDAAYGTVAAIQVGRLKDEGKATPE-------MISMVKRQNCDRAL 376 Query: 410 AVIAEAMECIGGSGYIEERSIARH 433 E GG+ +E +I RH Sbjct: 377 HNARVLQEIFGGNAVSDEYAIGRH 400 >gi|293609569|ref|ZP_06691871.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828021|gb|EFF86384.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 380 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 90 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 136 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 137 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLADTHLEGFKKG 195 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 196 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 245 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A ++ +R ++ A Y + RH G + + +A +D A A R Sbjct: 246 -ASTAIGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATAAFYERNVAL 304 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 305 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 357 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 358 QRIYGGTNEIM 368 >gi|254237074|ref|ZP_04930397.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719] gi|126169005|gb|EAZ54516.1| hypothetical protein PACG_03111 [Pseudomonas aeruginosa C3719] Length = 642 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVE----GR 252 LTE GTD+ I ++ + +DG Y +SG K F++ D ++LA++ G Sbjct: 166 LTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGS 225 Query: 253 VGC--FLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 G FLVP+ L +DG+ N + +++K+G +++AT + F G+L+G++N Sbjct: 226 RGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKG 285 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 + M L I + +S A+ YAR R Sbjct: 286 LAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARER 322 >gi|154248630|ref|YP_001419588.1| acyl-CoA dehydrogenase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162715|gb|ABS69931.1| acyl-CoA dehydrogenase domain protein [Xanthobacter autotrophicus Py2] Length = 397 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 22/252 (8%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A + ++ +KI DG Y L+G K W +SP++D ++ A Sbjct: 128 PKLATGEWIGCFGLTEPDAGSDPAGMRTRAEKI-DGGYRLNGAKMWITNSPIADLAVVWA 186 Query: 248 QV---EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD 301 + + + F+V R ++ G +++ K+ R++ T E+ + LL + Sbjct: 187 KSAAHDNAIRGFVVERGMK-----GFSTPKIEGKLSLRASITGEIVLEDVEIPEENLLPN 241 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ GP + Y ++ A+A Y R G L ++++ +AD Sbjct: 242 VSGLAGPFGCLNRARY-GIGWGAMGAAEACFAQARQYTLDRKQFGKPLAATQLVQKKLAD 300 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A DIA R+ F+E + E ++ K C A + A + GG Sbjct: 301 MATDIAFGLQACLRVGRLFEEGRLPPETISF-------IKRNNCGKALDIARTARDMHGG 353 Query: 422 SGYIEERSIARH 433 +G E + RH Sbjct: 354 NGISAEFHVIRH 365 >gi|134292055|ref|YP_001115791.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135212|gb|ABO56326.1| acyl-CoA dehydrogenase domain protein [Burkholderia vietnamiensis G4] Length = 377 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFIMLAQVEGRVG--C 255 LTE G++ + ++ + + DG + L+G K F++ + ++ F M G+ G Sbjct: 125 LTEPHAGSEAHNLRTRAE-LHDGQWVLNGAKQFVTNGQRAGVAIVFAMTDPDAGKRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD----LNVSTGP 308 FLVP G + + K+G R++ T + N LLG+ L ++ Sbjct: 184 FLVPT-----DTPGFIVGKPEKKMGIRASDTCPITLENCTLPADALLGNRGEGLKIALSN 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A ++ R + +A YA R G + + +++ +AD+A I A Sbjct: 239 LEGGRIGI----AAQALGIARAAFDKARRYAGERVQFGKPIAEHQAIQQKLADMATQINA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L A EA+ A++ A +MA V ++A++ GG GY+ + Sbjct: 295 ARLLVHHAAKLRTAGLPCLSEASQAKLFA-------SEMAERVCSDAIQIHGGYGYLADY 347 Query: 429 SIARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 348 EVERHYRDARITQIYEGT 365 >gi|309779044|ref|ZP_07673812.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|308922204|gb|EFP67833.1| acyl-CoA dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 377 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS 237 F E P T AIG LTE G++ + ++ + DG + L+G+K F+++ Sbjct: 101 FGTEAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRA-VLRDGKWVLTGNKQFVTN 159 Query: 238 -PMSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF 291 +D I+ A + G F+VP +P G R ++K+G R++ T + Sbjct: 160 GARADIAIVFAVTDPDAGKRGISAFIVP----TDTP-GFHVGRPEHKLGIRASDTCPITL 214 Query: 292 S-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 N G L ++ +E +I I A +V R + A +YA R Sbjct: 215 EDCAVPEENLLGERGEGLKIALSNLEGGRIGI----AAQAVGIARAAFDAARNYANERIQ 270 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G L + + +AD+A + AA L A K EA+ A K + Sbjct: 271 FGKALREHQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQA-------KLYA 323 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++A + + A++ GG GY+ + ++ RHYR++ I G+ Sbjct: 324 SELAEEICSNAIQIHGGYGYLADYAVERHYRDARITQIYEGT 365 >gi|256822285|ref|YP_003146248.1| acyl-CoA dehydrogenase domain-containing protein [Kangiella koreensis DSM 16069] gi|256795824|gb|ACV26480.1| acyl-CoA dehydrogenase domain protein [Kangiella koreensis DSM 16069] Length = 386 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ + + + D Y L+G+K W + P +D ++ A+ E G + Sbjct: 127 LAMSEPGAGSDVVGMKLRAELKGDK-YILNGNKMWITNGPEADVLVVYAKTEPDAGSKGI 185 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-EDMKILIY 317 + + G + +K+G R + T EL F + + NV GP+ E +KIL+ Sbjct: 186 TAFIIEKGFKGFSTAQKLDKLGMRGSNTCELVFEDC---EVPAENV-MGPINEGVKILMS 241 Query: 318 ---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 + A++S MR + + Y R G + +++ +AD+ + A+ A Sbjct: 242 GLDYERAVLSAGPLGIMRACMDVVVPYVHERKQFGKPIGSFQLIQGKVADMYTTMNASRA 301 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + +A S D ++ ++AA A + A + A + +A++ +GG+GYI E S Sbjct: 302 YVYAVAKSCDRGETTRKDAAAAILFA-------AENATKLALDAIQVLGGNGYINEYSTG 354 Query: 432 RHYRESPANSILLGS 446 R R++ I G+ Sbjct: 355 RLLRDAKLYEIGAGT 369 >gi|182434967|ref|YP_001822686.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775484|ref|ZP_08234749.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] gi|178463483|dbj|BAG18003.1| putative acyl-CoA dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655817|gb|EGE40663.1| Butyryl-CoA dehydrogenase [Streptomyces cf. griseus XylebKG-1] Length = 401 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 47/281 (16%) Query: 208 GTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPR 260 G+D++AI+S+G + DG Y L+G K +L++ + + + EG + Sbjct: 135 GSDVSAISSKG--VKDGEEYVLNGQKMWLTNGGTSTLVAVLCRSDEGHPEGTAPHKSMTT 192 Query: 261 LLEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--- 311 L + P GL +K+G + T EL ++ DL + V Sbjct: 193 FLVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDDLRIPANRVLGGTT 244 Query: 312 ----MKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADI 362 +++ ++ ++V+ +A+ + YA++RH G + ++ +A++ Sbjct: 245 GRGFYQMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKPIAQHQAIQFKLAEM 304 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A + AA A+ A D + EA A KY + V+ +A GG Sbjct: 305 ATKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGY 357 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 G+ +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 358 GFSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|302547333|ref|ZP_07299675.1| butyryl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302464951|gb|EFL28044.1| butyryl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 389 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 11/251 (4%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + + + ++E G+ +T++ + D +W +D +++ A++ Sbjct: 117 PVIRGDATMAVAISEPDAGSAATDMTTRAVRDGDSYRVSGSKRWISGGGHADQYLLYARL 176 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G + L+ D G+ Y + +G R + ++ F + +L V G Sbjct: 177 ADVPGARGIGALVVDADTPGISYGAQEKLMGFRGIPSCDIHFDDVR-VPAANLLVDAGRF 235 Query: 310 EDMKI---LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ L L +A MS++ + ++ + Y + R G LI+ + +AD+ L + Sbjct: 236 RELFTGFSLERLGNATMSLALAQAAVDRTVDYVQTRTAFGKPLIEFQATQLTLADMVLQV 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A E + A+ A T A V A++ GG+GY E Sbjct: 296 EAARLLVYRAARGAGRGLPSPLEVSLAKCTANET-------AKRVTDLAIQLHGGNGYTE 348 Query: 427 ERSIARHYRES 437 E I R +R++ Sbjct: 349 EYGIERLHRDA 359 >gi|302767660|ref|XP_002967250.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii] gi|300165241|gb|EFJ31849.1| hypothetical protein SELMODRAFT_87543 [Selaginella moellendorffii] Length = 373 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 86/392 (21%), Positives = 158/392 (40%), Gaps = 69/392 (17%) Query: 89 PGGERWDKVEFHPAWHALLRRSI---HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQ 145 P +WD+ ++ P +LR++ G+ C+ E V + +++ A ++ Sbjct: 9 PNAAQWDRDKYFPV--EVLRKAAGLGFGGMFCA------EDVGGSRLNRVDGAVIF--EA 58 Query: 146 LEAGHLMSPSVTSASMVALMTTPRVHKD-----WAPKIFSREYDPTNKAPMQKTSVAIGL 200 L G + + + + + R D W PK+ E + Sbjct: 59 LAYGDVSTTAYLTIHNMCCSLIDRYGNDQQRNHWLPKLIQMELFSS-------------Y 105 Query: 201 GLTEKRGGTDIAAI---------TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE 250 LTE G+D A++ T+ Q Y L+G K F+S +SD ++++A+ Sbjct: 106 CLTEPSSGSDAASLQAKNYYQLQTTARQAHGSSDYILNGSKAFISGGSVSDLYLVMART- 164 Query: 251 GRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFL 298 G +G CF LLE G P GL + R ++K+G RS T V + +N G Sbjct: 165 GALGPKGISCF----LLEKGMP-GLSFGRPEDKLGWRSQPTTSVVMEEVRVPSANMLGRE 219 Query: 299 LGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 ++ ++ +I I A S G + L A YA R G + + + Sbjct: 220 GQGFAIAMAGLDGGRINI----ASCSCGGAQFCLDTAQEYASTRKQFGKAITEFQSTQFK 275 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+ + A+ + A + D + A A + K + + +A++ Sbjct: 276 LADMQTALHASRLMVSNAAAALDAGSPK------ASACAAMAKRFATDACFNIANDALQL 329 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+++ + R+ R+ ++IL G+ M Sbjct: 330 HGGYGYLKDYPVERYLRDLRVHTILEGTNEIM 361 >gi|294629484|ref|ZP_06708044.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292832817|gb|EFF91166.1| acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 386 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 50/318 (15%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 + L T + W PK+ + E + GLTE GG+D A + + Sbjct: 98 IHLFGTEEQKRQWLPKLCAGE-------------ILGAFGLTEPDGGSDAGATRTTARLD 144 Query: 222 SD-GIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLC 271 + G + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 145 EESGEWVINGAKCFITNSGTDITGLVTVTAVTGRKSDGRPLISSIIVP----SGTP-GFT 199 Query: 272 YQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328 +K+G ++ T EL F + LLG+ G + ++IL D ++++ + Sbjct: 200 VAPAYSKVGWNASDTRELSFQDVRVPAANLLGEQG--RGYAQFLRIL---DEGRIAIAAL 254 Query: 329 RVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA 383 LA E++ YA+ RH G + ++ IAD+ + A + RLA + +A Sbjct: 255 ATGLAQGCVDESVKYAKERHAFGKPIGANQAIQFKIADMEMK-----AHTSRLA--WRDA 307 Query: 384 KSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 R + A + K + +A +A + GG G++ E +AR +R+S + Sbjct: 308 AYRLVAGEPFKKEAALAKLYSSTIAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILE 365 Query: 444 LGSGNAMVLDVLNLLEKG 461 +G G + V +L E G Sbjct: 366 IGEGTSEVQRMLIARELG 383 >gi|226361430|ref|YP_002779208.1| glutaryl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226239915|dbj|BAH50263.1| putative glutaryl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 390 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 25/252 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P AIG GLTE G++ A + + ++ D + L+G K W + ++D ++ A Sbjct: 124 PRMAAGKAIGCFGLTEPDFGSNPAGMRTNAKRDGDD-WILNGTKMWITNGSVADVAVVWA 182 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNV 304 + + + F+VP G +K+K+ R++ T EL + +L + Sbjct: 183 RTDDGIRGFVVPT-----DTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKG 237 Query: 305 STGPV---EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 +GP+ + + I + + R L AI YA+ R V L + + IAD Sbjct: 238 LSGPLGCLNEARFGIIFGA----MGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIAD 293 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +AL++ L++ L D ++RSE+ + ++ + A A+ E +G Sbjct: 294 MALEVGKGHLLAYHLGRLKDRGEARSEQVSTGKLNN-------VREAIAIARECRTILGA 346 Query: 422 SGYIEERSIARH 433 +G E + RH Sbjct: 347 NGITLEYPVIRH 358 >gi|330822830|ref|YP_004386133.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] gi|329308202|gb|AEB82617.1| Isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans K601] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/276 (22%), Positives = 127/276 (46%), Gaps = 25/276 (9%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP V + +G++E+ G+D++++ ++ ++ D Y +SG K W + +D +L Sbjct: 112 APAIAGDVVVSIGVSEQGAGSDVSSLKTRARRDGDD-YVISGSKMWITNGTQADWICLLC 170 Query: 248 Q-----VEGRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFL 298 V +VP L E+G G+ Q++K K G S+ T ++ F Sbjct: 171 NTSDGPVHKNKSLIVVP-LKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHR 228 Query: 299 LGDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 +G+ + G + MK LD A ++ + + + E Y R+R G L+D ++ Sbjct: 229 IGEEGM--GFIYQMKQFQEERLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQ 285 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++ ++ A +L++R ++ + E A+ A++ A ++ + M Sbjct: 286 YKLAELKTELEALRSLTYRATLAYVNGEDVIELASMAKLKA-------GRLGREIADWCM 338 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + GG GY + ++R YR+ SI G+ M++ Sbjct: 339 QFQGGMGYTWDNRVSRAYRDYRLGSIGGGADEVMMM 374 >gi|330808408|ref|YP_004352870.1| isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376516|gb|AEA67866.1| Putative isovaleryl-CoA dehydrogenase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 24/269 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253 +G++E G+D+A + + +K D Y ++G K W ++P +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNAPSADFICLLANTSDDKPHVNK 181 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 +VP SP G+ + +K+G RS+ T ++ F + + G M+ Sbjct: 182 SLIMVPMH----SP-GISLGQHLDKLGMRSSETAQVFFDDVRVPQRNRIG-QEGAGFMMQ 235 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIH----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +L + + + + M L I Y + R G LID V+ +A++A +I Sbjct: 236 MLQFQEERLFGAANMLKGLEHCIDSTIAYCKERKTFGTALIDNQVIHFRLAELASEIECL 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL ++ + + + A+ A++ A ++A ++ GG G++ + Sbjct: 296 RALVYQATEQYINGQDVTRLASMAKLKAG-------RLARETTDSCLQYWGGMGFMWDNP 348 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLL 458 +AR YR+ SI G+ M+ + L+ Sbjct: 349 VARAYRDVRLVSIGAGADEIMLGIICKLM 377 >gi|260429276|ref|ZP_05783253.1| acyl-CoA dehydrogenase [Citreicella sp. SE45] gi|260419899|gb|EEX13152.1| acyl-CoA dehydrogenase [Citreicella sp. SE45] Length = 437 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 38/307 (12%) Query: 158 SASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQ 217 + S + + TP + + PK+ S + T + LTE G+D++ I + Sbjct: 125 AVSTLLVHGTPAQQETYIPKLASGAWLST-------------MCLTEAGAGSDLSRIRCR 171 Query: 218 GQKISDG-IYCLSGHKWFLSSPMSD-AFIMLAQVEGRVGC----------FLVPRLLEDG 265 + DG + + G K F+S D + +L V R G FL P DG Sbjct: 172 --AVRDGESWRIEGQKIFISGGDQDLSEGILHLVLARTGAPEDGVKGLSLFLCPSD-SDG 228 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 N + R++ K+G ++ T ++EF L+G + M LD ++ V Sbjct: 229 VRNAITVTRIEEKLGLHASPTCQMEFDGASAELVGAEGRGLAAMFTMMNHARLDVSLQGV 288 Query: 326 SGMRVSLAEAI------HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + A A R+ S +L D P ++R +A+ A A+ Sbjct: 289 AHAARAHAIAAAYAAERRQGRQPDGSDAMLADHPDVQRMLAEQQDAARVARAMCHIALGE 348 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + R + A + P+ K WC + ++ +GG GY+EE +A+ +R++ Sbjct: 349 LE----RGDAPALVEFLTPLCKIWCTEAGLRAADLGIQILGGYGYLEEYGVAQIWRDARI 404 Query: 440 NSILLGS 446 +I G+ Sbjct: 405 TTIYEGA 411 >gi|149914567|ref|ZP_01903097.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b] gi|149811360|gb|EDM71195.1| isovaleryl-CoA dehydrogenase [Roseobacter sp. AzwK-3b] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 39/282 (13%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N P QK GL ++E G+D+ ++ + +K +D Y L+G K W + Sbjct: 106 NGTPEQKEKYLPGLVSGAHVGALAMSEAGAGSDVVSMKLRAEKRNDH-YKLNGTKYWITN 164 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-- 294 P +D ++ A+ + G + L + + G +K+G R + T EL F + Sbjct: 165 GPDADTLVVYAKTDPDAGSKGITAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVEV 224 Query: 295 -FGFLLGDLN-----VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI 348 F +LG+ + +G + +L + + IM+ L E + Y R G Sbjct: 225 PFENVLGEEGRGVRVLMSGLDYERVVLAGIGTGIMAAC-----LDEIMPYMAERKQFGQP 279 Query: 349 LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC--- 405 + +M+ IAD+ + +A A + +A + D ++AA CC Sbjct: 280 IGSFQLMQGKIADMYTAMNSARAYVYEVAKACDRGDVTRQDAAA-----------CCLYA 328 Query: 406 -KMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + A +A++ +GG+G++ + +AR +R++ I G+ Sbjct: 329 SEQAMVQAHQAVQAMGGAGFLADAPVARLFRDAKLMEIGAGT 370 >gi|315043194|ref|XP_003170973.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] gi|311344762|gb|EFR03965.1| acyl-CoA dehydrogenase [Arthroderma gypseum CBS 118893] Length = 435 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K S G Y L+G K W +S + FI+ A ++ G + Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + + G + + K+G R+++T L F + LLG+ + K I Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288 Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + ++ LA A + R G ++ M+ +A +IAAA Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL F A + + ++AA A++ + ++A V + A+E +GG G++ E Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSSLAVEWMGGMGFVREGIA 401 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +R+S +I G+ N + + L+K Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431 >gi|311029703|ref|ZP_07707793.1| Acyl-CoA dehydrogenase type 2 domain protein [Bacillus sp. m3-13] Length = 388 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 30/231 (12%) Query: 219 QKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLLEDGSPNGLCYQRL 275 +K S+G + ++G K F S +P+ D FI+ A VEG VG FL+PR L+ G+ + Sbjct: 148 KKHSNGGWVINGRKNFTSLAPVLDYFIISASVEGTEDVGEFLLPRELK-----GISIEET 202 Query: 276 KNKIGNRSNATVELEFSNTFGFLLGDLNVST--GPVEDMKIL----IYLDSAIMSVSGMR 329 N + R+ + +L S L + P +L YL AI + Sbjct: 203 WNSMSMRATRSDDLVLSEVMASKEALLYIKKKKSPKPQGWLLHIPACYLGIAI-AARNEA 261 Query: 330 VSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE- 388 VS A++ H H + + P ++ +A + +++ AA L + +A +DE + + Sbjct: 262 VSFADSYHPNSLPHP----IREVPKVRERVAKMDVELTAARHLLYSVARLWDEEPDKRDK 317 Query: 389 ---EAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 E A A+++A A +++ EAM +G E + RHYR+ Sbjct: 318 LIGELATAKLVA-------TNSAISIVDEAMRIVGAQSLHAEHPLQRHYRD 361 >gi|307320351|ref|ZP_07599769.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306894073|gb|EFN24841.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] Length = 380 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 18/272 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ V LTE G+D AA+ ++ + D Y L+G K F+S ++ Sbjct: 112 PLLTMDVLASYCLTEPGSGSDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMAR 170 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302 G G + + + GL + + K+G + T V + N G Sbjct: 171 TGEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGF 230 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ ++ ++ I A S+ G + + +A+ Y + R G + + ++ +AD+ Sbjct: 231 RIAMAGLDGGRLNI----AAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADM 286 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ A +R A + D A + + + + K + +V +A++ GG Sbjct: 287 ATDLEVARTFLWRAACALDAADPEATK------LCAMAKRFVTDRCFSVANDALQLHGGY 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GY+ + + + R+ + IL G+ M L V Sbjct: 341 GYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372 >gi|302343818|ref|YP_003808347.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] gi|301640431|gb|ADK85753.1| acyl-CoA dehydrogenase domain protein [Desulfarculus baarsii DSM 2075] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 23/257 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 LTE G+D +AI ++ +K D Y L+G K W + + + ++A + G Sbjct: 122 FALTESAAGSDASAIRTEARKEGDH-YVLNGSKQWITNGGHAGIYTVIAITDRTKGPRGA 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 + + G + ++K+G R++AT EL F++ + D +S E M + + Sbjct: 181 SAFIVEADDEGFSVGKKESKLGIRASATAELIFNDC--RIPADRLLSR---EGMGFVAAM 235 Query: 319 DSAIMSVSGM--------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +S G+ + +L EA +AR R +I + +AD+A + AA Sbjct: 236 RTFDLSRPGVGAQGVGVAQGALDEAAAFARTRRQFDKPIITFQAVAHMLADMATKVEAAR 295 Query: 371 ALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 AL + +A D AK S+ +A A++ + +A V A++ +GG GY+ E Sbjct: 296 ALVYCVARHIDSGAKDISKVSAMAKV-------FPTDVAMEVTTNAVQVMGGHGYMREYP 348 Query: 430 IARHYRESPANSILLGS 446 + + R++ I G+ Sbjct: 349 VEKMMRDAKILQIYEGT 365 >gi|186474945|ref|YP_001856415.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia phymatum STM815] gi|184191404|gb|ACC69369.1| acyl-CoA dehydrogenase domain protein [Burkholderia phymatum STM815] Length = 376 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQ 248 P+ + + LTE + G+D +A+ + + DG Y L+G K F++S + + I++A Sbjct: 111 PLARGEMLGAFCLTEPQAGSDASALRTTATRDGDG-YMLNGVKQFITSGKNGNVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G F+VP G RL+ K+G S+ T ++ F N L+G Sbjct: 170 TDKNAGKRGISAFIVPT-----ETPGYLVARLEEKLGQHSSDTAQIVFDNCRVPAANLIG 224 Query: 301 D----LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 SEGEGYRIALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQALFSHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A + AA L + A+ D + EAA A++ A + A + + A+ Sbjct: 281 FRLADMATQLEAARQLIWHAASLKDAGQPCLTEAAMAKLFAS-------EAAERICSAAL 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QIHGGYGYLSDFPVERIYRDVRVCQIYEGTSD 365 >gi|50084590|ref|YP_046100.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] gi|49530566|emb|CAG68278.1| putative acyl-CoA dehydrogenase [Acinetobacter sp. ADP1] Length = 434 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 18/219 (8%) Query: 226 YCLSGHKWF-LSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y LSG K + +D ++ A ++G+ F+V R + + +G ++ Sbjct: 227 YFLSGEKTLVILGESADLILVTAMLDGQPEVFIVER-------DPTISIKSAPAMGLKAA 279 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV 344 T+ L F +T LLGD + D+ L++ A+ + ++ + I YA R Sbjct: 280 QTMSLYFDHTPAVLLGDNDFDYSAFIDLGSLMWCAMAVGTCEAVK---SYCIAYANDRTA 336 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWC 404 G + + + IAD+A++I A L + A+ + ++ EA AR++ C Sbjct: 337 FGEPISHRQSVAFMIADMAIEIDAMRMLIWNAASLAEAGQAFHREAYLARLL-------C 389 Query: 405 CKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSIL 443 + + + + ++ +GG G+ +E + R YR+ A +IL Sbjct: 390 AEKSMRIGTDGVQLLGGHGFTKEHPVERWYRDLRATAIL 428 >gi|3212539|pdb|1IVH|A Chain A, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6 Angstroms Resolution: Structural Basis For Substrate Specificity gi|3212540|pdb|1IVH|B Chain B, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6 Angstroms Resolution: Structural Basis For Substrate Specificity gi|3212541|pdb|1IVH|C Chain C, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6 Angstroms Resolution: Structural Basis For Substrate Specificity gi|3212542|pdb|1IVH|D Chain D, Structure Of Human Isovaleryl-Coa Dehydrogenase At 2.6 Angstroms Resolution: Structural Basis For Substrate Specificity Length = 394 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 118 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 162 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 163 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 219 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 220 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 274 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 275 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 333 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 334 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 380 >gi|322503093|emb|CBZ38177.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 412 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 46/348 (13%) Query: 125 EPVVRKQAHKIRAARLYLMAQLEAGHLM--------------SPSVTSASMVALMTTPRV 170 +PVV K+A + A LE G + P+V+ V + Sbjct: 58 DPVVLKEAFAAGLMGIETPADLEGGGMSFFSSILAIEELARHDPAVSVTVDVQNTLVNNI 117 Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 ++A R+Y P + K +V LTE G+D A+ ++ +K + ++G Sbjct: 118 FFNFANDAQRRKYLPK----LAKDTVGC-FCLTEAGSGSDAFALNTKAEK-KGSKWVING 171 Query: 231 HKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 K ++++ + F+++A V+ G CF+V + G+ R +NK+G R++ Sbjct: 172 SKLYITNGGWAGIFLVMATVDPSKGYKGITCFVV----DSSETPGVSVVRTENKLGIRAS 227 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAEA-----IHY 338 +T EL N + + NV + KI I L+ + + + +A+ + Y Sbjct: 228 STAELRLENV---EVPEENVIGEVGKGYKIAINILNEGRIGIGAQMLGIAQGSLDIVMPY 284 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 +R G + D M+ A+ A+++ AA + + + + ++AA A Sbjct: 285 LFQRKQFGKFIGDFQGMQMQYAECAMELHAARLMVYNASRKKQNNEMFIQDAAMA----- 339 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 KY+ +A + A+E GG G++++ + R YR++ +I G+ Sbjct: 340 --KYFASVVAEKTASRAVEWAGGVGFMKDFGLERFYRDAKIGAIYEGT 385 >gi|311103339|ref|YP_003976192.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310758028|gb|ADP13477.1| isovaleryl-CoA dehydrogenase [Achromobacter xylosoxidans A8] Length = 392 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG +N +K+L Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNAG------VKVL 240 Query: 316 IY-LDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD +SG V + +A+ Y R G + + +++ +AD+ + A+ Sbjct: 241 MSGLDYERAVLSGGPVGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTLQAS 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A +++ + D + +E R + + A + E ++ +GG+GYI E Sbjct: 301 RAFCYQVGKNLD--RLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYINEYP 358 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 359 VGRLWRDAKLYEIGAGT 375 >gi|296479444|gb|DAA21559.1| isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus] Length = 416 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 38/266 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + + D Y L+G K F+S +D ++++ + G + C Sbjct: 161 LTEPGSGSDAASLMTSAVRQHDH-YILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCV 219 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNV 304 +V E G+P GL + + + K+G S T + F + GFL+ + Sbjct: 220 VV----EKGTP-GLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGL 274 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + G + + A S+ S+ A Y + R G L + ++ +AD+A Sbjct: 275 NGGRI---------NVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAA 325 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + A+ L R A A + EE A ++ + K + A+ +A++ GG GY Sbjct: 326 RLVASR-LMIRTA-----ATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGY 379 Query: 425 IEERSIARHYRESPANSILLGSGNAM 450 +++ ++ ++ R+S + IL GS M Sbjct: 380 LKDYAVQQYVRDSRVHQILEGSNEVM 405 >gi|296126580|ref|YP_003633832.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM 12563] gi|296018396|gb|ADG71633.1| acyl-CoA dehydrogenase domain protein [Brachyspira murdochii DSM 12563] Length = 381 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 40/266 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI---YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255 GLTE GTD A Q + D + L+G K F++ S ++ +++ A + G Sbjct: 123 FGLTEPNAGTDAAG--QQTTAVLDEAAQEWVLNGSKIFITNSGYANVYVIFAMTDKSKGL 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 + + + + G + + K+G R +AT EL F N LLG+L + Sbjct: 181 KGISAFIVESTAPGFSIGKKEKKLGIRGSATCELIFENARIPKDNLLGELG------KGF 234 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 KI A+M++ G R+ +A E + Y + R G + + + +A Sbjct: 235 KI------AMMTLDGGRIGIASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLA 288 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 ++ + + A+ L ++ A S +AA A++ A T A V +A++ G Sbjct: 289 NLEVKVEASRLLVYKAAWRESNHLPYSVDAARAKLFASET-------AMEVTTKAVQLHG 341 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY E + R R++ I G+ Sbjct: 342 GYGYTREYPVERMMRDAKITEIYEGT 367 >gi|313126784|ref|YP_004037054.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] gi|312293149|gb|ADQ67609.1| acyl-CoA dehydrogenase [Halogeometricum borinquense DSM 11551] Length = 380 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 33/276 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ + G LTE G+D + + + +K D + + G K F+++ +++ V Sbjct: 113 PLAEGEYLGGWALTEPSSGSDASDMDTTAEKDGD-EWVIDGSKQFITNANVAGSVLVKAV 171 Query: 250 ----EGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLG 300 EG G F+V +DG + +K+G + T EL F LLG Sbjct: 172 TDPGEGYDGISTFIVDPEEDDGFEVTTVW----DKMGLNCSPTCELAFDEVRIPEDRLLG 227 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAI 359 + G + MK L D +S++ + LA+ + A + + +P+ K AI Sbjct: 228 EEGA--GWKQTMKTL---DGGRISIAALSTGLAQGAYEAAKTYAGDREQFGKPISKFDAI 282 Query: 360 ADIALDIAAATA----LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 D +D+ T L+ + A +D +S S E+A A++ A + A V +A Sbjct: 283 RDKLVDMHRKTERARLLTHKAATRYDAGESVSRESALAKLDA-------SEAAREVAEDA 335 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 ++ +GG GY E+ + R YR+ A + +G G + + Sbjct: 336 VQVLGGYGYTEDFAPQRFYRD--AKLMEIGEGTSEI 369 >gi|167746635|ref|ZP_02418762.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662] gi|317471462|ref|ZP_07930814.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167653595|gb|EDR97724.1| hypothetical protein ANACAC_01346 [Anaerostipes caccae DSM 14662] gi|316901077|gb|EFV23039.1| acyl-CoA dehydrogenase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 378 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 20/263 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A T+ K D Y L+G K F+++ ++ + + A + G + Sbjct: 123 LTEPGAGSDAGAGTTTAVKDGDE-YILNGRKCFITNGGIASFYCITAMTDKSKGVKGISM 181 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMK 313 L D GL ++K+G R++ T ++ N G ++ ++ + Sbjct: 182 FLVDAGTPGLSTGNEEDKMGIRTSNTCDVVLEDCRIPAKNLIGAEGKGFGIAMKTLDQAR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + +A ++ G+ EAI Y + R G +I ++ IAD+A+ A + Sbjct: 242 AWMGCVAAGIAQRGIN----EAIAYGKERIQFGKPIIKNQALQFKIADMAIKTETARQMV 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D S S+EAA I K + +A V +EA++ GG GY E + + Sbjct: 298 AHALTRMDLGLSHSKEAA-------IAKCYASDIAMEVASEAIQMFGGYGYSREYPVEKL 350 Query: 434 YRESPANSILLGSGNAMVLDVLN 456 R++ I GS + + N Sbjct: 351 LRDAKIFQIFEGSNEIQRIVIAN 373 >gi|330898843|gb|EGH30262.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 335 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 31/209 (14%) Query: 152 MSPSVTSASM--VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 M P ++ +M ++ TP + K+ S E+ T + LTE GT Sbjct: 126 MYPGLSHGAMNTISEHGTPEQQDAYLTKLVSGEWTGT-------------MCLTESHCGT 172 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR------VGCFLV 258 D+ + ++ + +DG Y ++G K F+S+ D I+LA++ + F+V Sbjct: 173 DLGMLLTRAEPQADGTYKVTGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIV 232 Query: 259 PRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 P+ L G N + +++K+G NAT + F G+L+G N + Sbjct: 233 PKFLSAADGGIGERNAVNCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFM 292 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRR 342 L +A+ ++ V+ + YAR R Sbjct: 293 NTARLGTALQGLAHAEVAFQGGLQYARDR 321 >gi|332717081|ref|YP_004444547.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3] gi|325063766|gb|ADY67456.1| glutaryl-CoA dehydrogenase [Agrobacterium sp. H13-3] Length = 395 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 39/289 (13%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKA--PMQKTSVAIG-LGLTEKRGGTDIAAITS 216 SM+++ ++ +H IF+ D K P + IG GLTE G+D + + Sbjct: 99 SMMSVQSSLVIHP-----IFAYGSDEQKKKYLPGLVSGELIGCFGLTEPDAGSDPGGMKT 153 Query: 217 QGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG---RVGCFLVPRLLEDGSPNGLCY 272 + +KI+ G Y L G K W ++P++D F++ A+ E ++ F++ + ++ GL Sbjct: 154 RAEKIAGG-YRLRGSKMWISNAPIADVFVVWAKSEAHDNQIRGFVLEKGMK-----GLSA 207 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMR 329 ++ K+ R++ T E+ LL +++ GP L+ A +S Sbjct: 208 PKIGGKLSLRASITGEIVMDGVEVGEDALLPNVSGLKGP------FGCLNRARYGISWGV 261 Query: 330 VSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + AE A+ Y R G L + ++ +AD+ +IA S R+ DE K Sbjct: 262 MGAAEDCWFRALQYGLDRKQFGKPLAGMQLYQKKLADMQTEIALGLQASLRVGRLMDEHK 321 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 E M I K C A + +A + GG+G E + RH Sbjct: 322 MAPE-------MISIIKRNNCGKALDIARQARDMHGGNGIQIEYHVMRH 363 >gi|260558129|ref|ZP_05830339.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] gi|260408402|gb|EEX01710.1| cyclohexanecarboxyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 19606] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A +++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLSREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|117621521|ref|YP_855791.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562928|gb|ABK39876.1| glutaryl-CoA dehydrogenase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 391 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 18/238 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ S+ +++ DG Y L+G+K W +SP++D F++ A+++G + F Sbjct: 136 FGLTEPDAGSDPGSMKSRAERV-DGGYLLTGNKMWITNSPIADLFVVWAKLDGEITGF-- 192 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 +LE G GL +++ K R++ T E+ F L ++ GP + Sbjct: 193 --VLEKGMA-GLSAPKIEGKFSLRASITGEIVMERVFVPEANRLAGVSGLKGPFGCLNKA 249 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y A ++ A Y R G L + + +A++ +IA + Sbjct: 250 RY-GIAWGALGAAEFCWHAARQYGLDRQQFGRPLAATQLFQLKLANMQTEIALGLQGCLQ 308 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 DE + E + + K C A + A + GG+G +E + RH Sbjct: 309 AGRLMDEGRCPVE-------LVSLIKRNSCGKALEIARVARDMHGGNGISDEFHVIRH 359 >gi|149692066|ref|XP_001503597.1| PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial precursor (IVD) [Equus caballus] Length = 426 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 32/266 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------G 251 L ++E G+D+ ++ + +K D Y L+G+K W + P +D I+ A+ + Sbjct: 165 LAMSEPNAGSDVVSMKLKAEKKGDH-YILNGNKFWITNGPDADILIVYAKTDLAAVPPSR 223 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 + F+V + + G + +K+G R + T EL F + + N+ P + Sbjct: 224 GITAFIVEKDMP-----GFSTSKKLDKLGMRGSNTCELIFEDC---KVPATNILGHPSKG 275 Query: 312 MKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + +L+ LD + ++G M+ L +I Y R G + +M+ +AD+ Sbjct: 276 VYVLMSGLDLERLVLAGGPLGLMQAVLDHSIPYLHTREAFGQKIGHFQLMQGKMADMYTR 335 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + A + +A + DE S++ A + + + A V + ++C G +GYI Sbjct: 336 LMACRQYVYNVAKACDEGHCTSKDCAGVIL-------YSAECATQVALDGIQCFGANGYI 388 Query: 426 EERSIARHYRESPANSILLGSGNAMV 451 + + R R++ I G+G + V Sbjct: 389 NDFPMGRFLRDAKLYEI--GAGTSEV 412 >gi|119898215|ref|YP_933428.1| glutaryl-CoA dehydrogenase [Azoarcus sp. BH72] gi|119670628|emb|CAL94541.1| probable glutaryl-CoA dehydrogenase [Azoarcus sp. BH72] Length = 395 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T +G GLTE G+D ++ ++ +K+ G Y +SG K W + Sbjct: 116 FGTEAQKQKYLPKLATGEWVGCFGLTEPNHGSDPGSMITRAKKVPGG-YSISGAKMWITN 174 Query: 237 SPMSDAFIMLAQ-VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ EG + F +LE G GL + K+G R++ T E+ F Sbjct: 175 SPIADVFVVWAKDDEGDIRGF----VLEKGW-KGLSAPAIHGKVGLRASITGEIVMDEVF 229 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGG 347 + GP L+SA ++ + AEA + Y R G Sbjct: 230 CPEENAFPTVRGLKGP------FTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGR 283 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 L ++++ +AD+ +I ++ D + E + I K C Sbjct: 284 PLAANQLVQKKLADMLTEITLGLQACLQVGRLKDAGNAPVE-------ITSIIKRNSCGK 336 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 A + A + +GG+G +E +ARH Sbjct: 337 ALDIARTARDMLGGNGISDEFCVARH 362 >gi|289673864|ref|ZP_06494754.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. syringae FF5] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGDH-YVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ +AD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + EA++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|149926059|ref|ZP_01914322.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105] gi|149825347|gb|EDM84558.1| putative acyl-CoA dehydrogenase [Limnobacter sp. MED105] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 56/378 (14%) Query: 94 WDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHL-M 152 W+K + PA H L ++ + GL F + ++ + AA+ + ++ G + M Sbjct: 29 WEKEQMFPA-HELFKKMGNLGLLGLTKPEEFGGMGLDYSYSVVAAQA--LGKIHCGGVPM 85 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 + V + M TP + + + RE+ AP + +G++E G+D+A Sbjct: 86 AIGVQTD-----MATPALAR-FGSDELRREF----LAPAIAGDMVACIGVSEPGAGSDVA 135 Query: 213 AITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQV-EGR----VGCFLVPRLLEDG 265 + + +K DG Y ++G K W +S +D +LA EG+ +VP Sbjct: 136 GVKTTAKK--DGSDYIINGSKMWITNSLQADWICLLANTSEGKPHQNKSLIIVPM----- 188 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGPVEDMK 313 G+ ++ +KIG ++ T + F N GF+ + Sbjct: 189 KTPGITIEKKIHKIGMWASDTGLIHFDNVRVPQRNLIGMEGAGFMYQMIQFQEE------ 242 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L A S+ GM L E I+Y R+R++ G ++DQ V+ +A++ +I A AL Sbjct: 243 ---RLWGAANSIEGMMHVLNETINYTRQRNLFGSTVLDQQVVHFTLAELKTEIEALRALV 299 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 ++ + +E +A + K ++ V + ++ GG G+ E ++ Sbjct: 300 WQATEEYVAGGEVTE-------LASMCKLKSGRLVREVADKCLQFWGGMGFTWENPASQL 352 Query: 434 YRESPANSILLGSGNAMV 451 YR+ SI G+ M+ Sbjct: 353 YRDGRLISIGGGADEVML 370 >gi|186682449|ref|YP_001865645.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102] gi|186464901|gb|ACC80702.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102] Length = 1284 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 21/187 (11%) Query: 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 LLG LN +D + L +MS+ GM+ + Y+ RR VS G L++ P+ Sbjct: 816 LLGTLNNGMEVAQDAMMHGRLIIGVMSLGGMKRCAQLMLRYSSRRSVSTGRLLNNPISLV 875 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA-- 415 ++D+ I + L F++A+ D+ ++ +EA A C P ++ +A Sbjct: 876 WLSDLTAAITSLETLLFKIADLLDQGRAIPQEAFTA----------CKTAGPELVWQAAD 925 Query: 416 --MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL--EKGTNLFEQLFST 471 ++ +GG GYIE + R++ I G + LN+ + N +L Sbjct: 926 RLVQMLGGRGYIETNIAPQILRDARLFRIFEGP-----TETLNMFLGSRAMNQSAELHRF 980 Query: 472 LEQDLGS 478 L ++LG+ Sbjct: 981 LSEELGA 987 >gi|254497994|ref|ZP_05110757.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12] gi|254352771|gb|EET11543.1| glutaryl CoA dehydrogenase [Legionella drancourtii LLAP12] Length = 381 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 37/290 (12%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A++ + +K+ DG + L+G K W ++P++D I+ A Sbjct: 114 PGMATGEIIGCFGLTEPDAGSDPASMRTNAKKV-DGGWRLNGAKMWITNAPIADIAIVWA 172 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + + F+V D G+ +K K+ R++ T EL F N F + D N+ G Sbjct: 173 KTDAGIRGFIV-----DTKSEGVRCPEIKLKMSLRASITGELVFDNVF---VRDENLLPG 224 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLA-----EAI-------HYARRRHVSGGILIDQPVM 355 + L +A+ +S R +A AI +Y R L ++ Sbjct: 225 SEKG------LGAALSCLSQARYGIAWGAIGAAIECFDITSNYLLERKQFDKPLASFQII 278 Query: 356 KRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 ++ +AD+ +I A L+ + DE + M + K C+ A + + Sbjct: 279 QKDLADMYTEIIKAQCLNLHVGRLKDEKRETP-------TMISLVKGNSCREALKIARKC 331 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLF 465 +GG+G E + RH + G+ N L VL G N F Sbjct: 332 RNLLGGNGISLEYHVIRHMLNLESVFTYEGTDNVHTL-VLGKHITGINAF 380 >gi|217076822|ref|YP_002334538.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus TCF52B] gi|217036675|gb|ACJ75197.1| acyl-CoA dehydrogenase, short-chain specific [Thermosipho africanus TCF52B] Length = 379 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLV 258 LTE G+D + ++ K + + ++G K F+++ ++D +I+ A +G + Sbjct: 123 FALTEPNAGSDASNQSTYAVKDGNN-WIINGTKIFITNGGVADIYIIFASTNKELGAKGI 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI-LIY 317 + + G +++ K+G R +AT EL N ++ N+ + KI L Sbjct: 182 SAFIVERDTPGFSIGKIEEKMGIRGSATAELILDNV---VVPGENLLGKEGQGFKIALKT 238 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + ++ + +A E + Y ++R G + ++ IA++ I AA L Sbjct: 239 LDGGRIGIAAQALGIAQGAFDETVKYIKQREQFGRPIAKFQSVQFMIAEMKTKIEAARCL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + A ++ S EAA A KY+ +A V A++ GG GY +E + R Sbjct: 299 VYNAALKKMKSSDYSLEAAMA-------KYYASDVAMEVTRMAVQLHGGYGYTKEYPVER 351 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 352 MMRDAKITEIYEGT 365 >gi|193078422|gb|ABO13408.2| acyl-CoA dehydrogenase [Acinetobacter baumannii ATCC 17978] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A +++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKAG-------RLSREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|152987091|ref|YP_001347637.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150962249|gb|ABR84274.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 386 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 14/264 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ + G+ +K+G RS+ T ++ F N + + G M++L + Sbjct: 182 SLIIVPMNTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 240 Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + G+ + I Y + R G LID V+ +A++ ++ A AL + Sbjct: 241 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + + + A+ A++ A ++ V ++ GG G++ + ++R Y Sbjct: 301 QATELYVKGRDVTRLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVSRAY 353 Query: 435 RESPANSILLGSGNAMVLDVLNLL 458 R++ SI G+ M+ + L+ Sbjct: 354 RDTRLVSIGGGADEIMLGIICKLM 377 >gi|72162178|ref|YP_289835.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] gi|71915910|gb|AAZ55812.1| putative acyl-CoA dehydrogenase [Thermobifida fusca YX] Length = 383 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 33/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG----RVG 254 GLTE G+D A+++ + + D Y L+G K F+++ +D I+ A+ G + Sbjct: 123 FGLTEPDTGSDAASLSLKAVRDGDD-YVLTGSKMFITNGTWADVAIIFARTGGPGPKGIT 181 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVED 311 FLVP GL + K+G R T +L E +LG+ N + Sbjct: 182 AFLVPT-----DTPGLTRTTIHGKLGLRGQPTAQLFLDEVRVGPDAILGEEN------QG 230 Query: 312 MKI-LIYLDSA-----IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +I + LD +V R +L A+ +A+ R G + +++ +AD+A++ Sbjct: 231 FRIAMAALDKGRVSVAAGAVGAARGALESALAHAKERVQFGRPIAGFQLVQEMLADMAVE 290 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA L +R A+ D + S A+ A++ A T AM+ GG GYI Sbjct: 291 TDAARLLVWRAADLIDRGEPFSTAASMAKLYATETAVRAAN-------NAMQVFGGYGYI 343 Query: 426 EERSIARHYRESPANSILLGS 446 +E ++ R++ ++ G+ Sbjct: 344 DEYPPGKYLRDARVTTLYEGT 364 >gi|70730158|ref|YP_259897.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] gi|4582976|gb|AAD24879.1|AF081920_2 putative acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] gi|68344457|gb|AAY92063.1| acyl-CoA dehydrogenase [Pseudomonas fluorescens Pf-5] Length = 380 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 24/288 (8%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 T +D PK+ S E+ +N +TE G+D + + S+ +DG Sbjct: 101 FATAETKRDVLPKLASGEFIGSNA-------------ITEPEAGSDSSNLKSRAWPQADG 147 Query: 225 IYCLSGHKWFL-SSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 Y L GHK F ++P++D F+ A + G V + S GL +K+ RS Sbjct: 148 SYRLDGHKSFAGNAPIADIFVTYATTQPEYGALGVSGFIVHRSSAGLRVSEPLDKVCLRS 207 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM---SVSGMRVSLAEAIHYAR 340 E+ F + + L + + + + A + + M L + I +AR Sbjct: 208 CPAGEVFFDDCRVPEVNRLGEEGQGRQVFQSSMGWERACLFAAFLGMMERQLEQTIEHAR 267 Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT 400 R G + D + IA + L + +A L FR D+ ++ ++ Sbjct: 268 TRRQFGKPIGDNQAVSHRIAQMKLRLESARLLLFRACWGMDQGDP-------GQLNIALS 320 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 K + A A +A+ GG G +E I R+S +I G+ + Sbjct: 321 KLAISEGALASSIDAVRIFGGRGCLESFGIEAMLRDSIGTTIFSGTSD 368 >gi|30923365|sp|Q9D7B6|ACAD8_MOUSE RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondrial; AltName: Full=Acyl-CoA dehydrogenase family member 8; Short=ACAD-8; Flags: Precursor gi|23337095|gb|AAH37644.1| Acyl-Coenzyme A dehydrogenase family, member 8 [Mus musculus] Length = 413 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 31/272 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D A++ + ++ D Y L+G K F+S SD ++++ + G + Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDH-YILNGSKAFISGGGESDIYVVMCRTGGSGAKGISCI 216 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308 ++E G+P GL + + + K+G S T + F + GFL+ ++ G Sbjct: 217 VVEKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGR 275 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + A S+ S+ + + R G L ++ +AD+A + A Sbjct: 276 I---------NVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVA 326 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L R A A + EE A + + K + + A+ +A++ GG GY+++ Sbjct: 327 SR-LMIRTA-----AVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDY 380 Query: 429 SIARHYRESPANSILLGSGNAM-VLDVLNLLE 459 ++ ++ R+S + IL GS M +L NLL+ Sbjct: 381 AVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 412 >gi|16265193|ref|NP_437985.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] gi|307308820|ref|ZP_07588508.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|15141333|emb|CAC49845.1| acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306900625|gb|EFN31237.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 380 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 18/272 (6%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQV 249 P+ V LTE G+D AA+ ++ + D Y L+G K F+S ++ Sbjct: 112 PLLTMDVLASYCLTEPGSGSDAAALKTRAVREGDA-YLLTGQKQFISGAGESGLYIVMAR 170 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDL 302 G G + + + GL + + K+G + T V + N G Sbjct: 171 TGEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGF 230 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 ++ ++ ++ I A S+ G + + +A+ Y + R G + + ++ +AD+ Sbjct: 231 RIAMAGLDGGRLSI----AAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADM 286 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A D+ A +R A + D A + + + + K + +V +A++ GG Sbjct: 287 ATDLEIARTFLWRAACALDAADPEATK------LCAMAKRFVTDRCFSVANDALQLHGGY 340 Query: 423 GYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GY+ + + + R+ + IL G+ M L V Sbjct: 341 GYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 372 >gi|71665289|ref|XP_819616.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70884925|gb|EAN97765.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 401 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259 +TE G+D+AAI + +K D Y ++G K W + +++ + +LA EG +G F+V Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318 D + G+ + + +G R + T + F + ++ + NV P + KI + Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259 Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 AI +V+ + ++ EA YA +R G + + + +AD+A I AA L+ Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D+ +S + A+ A++ A C + A++ GG+G+ + + Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372 Query: 434 YRESPANSILLGS 446 YR++ SI G+ Sbjct: 373 YRDAKIFSIYEGT 385 >gi|324503419|gb|ADY41489.1| Medium-chain specific acyl-CoA dehydrogenase 1 [Ascaris suum] Length = 366 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 31/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-------GRV 253 +TE G+D+AAI ++ +K D Y ++G K W + F +LA+ E G+ Sbjct: 100 VTEPGAGSDVAAIKTKAEKKGDS-YVINGPKAWITGGGYATWFFVLARTETDPKTPAGQA 158 Query: 254 -GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V DG G+ + + +G R + T + F + ++ NV P Sbjct: 159 FTAFVV-----DGDTPGISRGKKELNMGQRCSDTRTITFEDV---VVPKENVLGAPGAGF 210 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ + D+ V+ V LA EA YA R G + + +AD+A+++ Sbjct: 211 KVAMGAFDTTRPGVAAGAVGLAWRALDEASKYALERKTFGVPISQHQGVSFLLADMAINL 270 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A +++R A D E ++Y A I K + A A A++ +GG+G+ Sbjct: 271 ELARLVTYRAAVDVD----NKERSSY---YASIAKCFAADTANITAANAVQILGGNGFNS 323 Query: 427 ERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 324 EYPVEKLMRDAKIYQIYEGT 343 >gi|304392162|ref|ZP_07374104.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130] gi|303296391|gb|EFL90749.1| isovaleryl-CoA dehydrogenase 2 [Ahrensia sp. R2A130] Length = 390 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 123/254 (48%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W ++P ++ I+ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMKLRAEKKGD-RYVLNGSKFWITNAPQANTLIVYAKTDPDAGPKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 190 TAFLIEKEFEGFSIAQKLDKMGMRGSETGELVFQDCEVPEENILGELN---GGVKVLMSG 246 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ + M+ ++ + Y R G + + +++ +AD+ + + AA A Sbjct: 247 LDYERAVLAAGPIGIMQAAMDIVLPYIHERQQFGKSIGEFQLVQGKVADMYVSMNAARAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ E+AA A + A + A V +A++ +GG+GYI + + R Sbjct: 307 VYAVAKACDRGETTREDAAGAILFA-------AERATQVALDAIQLLGGNGYINDYATGR 359 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 360 LLRDAKLYEIGAGT 373 >gi|256392406|ref|YP_003113970.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256358632|gb|ACU72129.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length = 386 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 43/273 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQV------EG 251 + +TE G+D+A I + + DG Y L+G K F++ ++D +++A+ Sbjct: 125 IAMTEPGTGSDLAGIKTTAKLSEDGTHYVLNGAKTFITGGVLADRVLVVARTAPHDPDNR 184 Query: 252 RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED 311 R G + L+ D G R KIG R++ T EL F+ D+ V PVED Sbjct: 185 RAGLSI---LVVDTKSEGYVVGRKLEKIGLRTSDTAELSFT--------DVKV---PVED 230 Query: 312 M-----KILIYLDSAIM---------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 + K YL ++ +V+ ++ AI Y + R V G + K Sbjct: 231 LLGEEGKAFSYLTHNLIPERLGIAVSAVAAADAAIQFAIGYTKERDVFGTPVASFQNTKF 290 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A+ + +++A A+ R + ++ + +AA ++ + +MA VI + ++ Sbjct: 291 VLAECSSEVSAGQAMIDRAMDLYEADELSVADAASVKL-------FTTEMAGRVIDKCLQ 343 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IA+ Y ++ I G+ M Sbjct: 344 LHGGYGYMLEFPIAKLYTDNRVFRIYGGTSEVM 376 >gi|312889445|ref|ZP_07748997.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] gi|311297997|gb|EFQ75114.1| acyl-CoA dehydrogenase domain protein [Mucilaginibacter paludis DSM 18603] Length = 379 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 30/270 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D + + + D Y L+G K W + + ++++AQ Sbjct: 113 PLAKGEKIGAFCLSEPEAGSDATSQHTTAIDMGD-YYLLNGTKNWITNGGSASTYLVIAQ 171 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FG 296 G + L+ + G +NK+G R + T L F++ FG Sbjct: 172 THAERGHHGINVLIVERGMEGFTVGPKENKLGIRGSDTHSLMFTDVKVPKENRIGEDGFG 231 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 F + G I + + + ++ L A+ Y++ R G L D ++ Sbjct: 232 FKFAMKTLEGGR-------IGIAAQALGIASGAYEL--ALQYSKERKTFGKPLADHQSIQ 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A +I AA L + A D +S YA + + + K + ++A EA+ Sbjct: 283 FKLADMATEIEAARLLCLKAAWLKDSGQS------YA-LASSMAKLFASEVAMKTTIEAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG G+++E + R R++ I G+ Sbjct: 336 QIHGGYGFVKEYHVERLMRDAKITQIYEGT 365 >gi|319760926|ref|YP_004124863.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] gi|317115487|gb|ADU97975.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 128/275 (46%), Gaps = 23/275 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 AP V + +G++E+ G+D++++ ++ ++ D Y +SG K W + +D +L Sbjct: 112 APAIAGDVVVSIGVSEQGAGSDVSSLKTRARRDGDD-YVISGSKMWITNGTQADWICLLC 170 Query: 248 QV-EGRV---GCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLL 299 +G V +V L E+G G+ Q++K K G S+ T ++ F + Sbjct: 171 NTSDGPVHKNKSLIVVPLKENGKRAKGVEVQKIK-KFGMWSSDTAQIFFDEVRVPVRHRI 229 Query: 300 GDLNVSTGPVEDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR 357 G+ + G + MK LD A ++ + + + E Y R+R G L+D ++ Sbjct: 230 GEEGM--GFIYQMKQFQEERLDGAARRLASIDL-INETADYLRQRIAFGRPLLDNQFIQY 286 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +A++ ++ A +L++R ++ + E A+ A++ A ++ + M+ Sbjct: 287 KLAELKTELEALRSLTYRATLAYVNGEDVIELASMAKLKA-------GRLGREIADWCMQ 339 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 GG GY + ++R YR+ SI G+ M++ Sbjct: 340 FQGGMGYTWDNRVSRAYRDYRLGSIGGGADEVMMM 374 >gi|114656361|ref|XP_001143192.1| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 6 [Pan troglodytes] Length = 407 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 131 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 175 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 176 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 232 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T EL F + +LG N + L L A + M+ L I Y Sbjct: 233 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 292 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 293 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 346 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V + ++C GG+GYI + + R R++ I G+ Sbjct: 347 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 390 >gi|40062479|gb|AAR37431.1| acyl-CoA dehydrogenase [uncultured marine bacterium 105] Length = 391 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 41/291 (14%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK 232 W + R Y P + TS ++G L+E G+D ++T++ DG + L+G K Sbjct: 111 WGNQDLKRRYLP------RLTSSSVGAYALSESSSGSDAFSLTTRCIP-RDGAFELTGRK 163 Query: 233 -WFLSSPMSDAFIMLAQVEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT 286 W ++ +D F++ A + + F+V R +E G ++K+G R+++T Sbjct: 164 LWITNAAEADIFVVFANAKPESEHRGITAFIVERDME-----GFSIGVKEDKLGIRASST 218 Query: 287 VELEFSNTF---GFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLAE-----AIH 337 EL LLG++ + K+ I L++ + + + LA AI Sbjct: 219 CELILDACLVPNSNLLGEIG------QGYKVAIETLNAGRIGIGAQMIGLASGALDHAIA 272 Query: 338 YARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMA 397 Y + R G + + ++ +A A ++ AA + A D E+A Sbjct: 273 YTKERKQFGKPIAEFQGVQFQLAQAATELEAARLTVYNAARLRDGGHKFLTESA------ 326 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + K + +A V + A++ GG GY+++ + + YR++ I G+ N Sbjct: 327 -MCKLFSSNVAEKVTSLAVQLFGGYGYVKDYPVEKLYRDAKIGQIYEGTSN 376 >gi|30584677|gb|AAP36591.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase [synthetic construct] gi|60654071|gb|AAX29728.1| isovaleryl coenzyme A dehydrogenase [synthetic construct] Length = 424 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|21355753|ref|NP_648239.1| CG6638 [Drosophila melanogaster] gi|7295072|gb|AAF50398.1| CG6638 [Drosophila melanogaster] gi|19528527|gb|AAL90378.1| RE62833p [Drosophila melanogaster] gi|220948676|gb|ACL86881.1| CG6638-PA [synthetic construct] gi|220958078|gb|ACL91582.1| CG6638-PA [synthetic construct] Length = 420 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278 L+G K W + +D I+ A+ G + F+V E G + +K Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327 +G R ++T EL F DL V + E+ + + + A V Sbjct: 240 LGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 M+ + A YA +R ++ + +++ +AD+ ++A + + +A S D A +RS Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGNRS 350 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ + + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403 >gi|116195064|ref|XP_001223344.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88180043|gb|EAQ87511.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 435 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/299 (22%), Positives = 125/299 (41%), Gaps = 32/299 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK- 232 W + ++Y P T+ L+E G+D A+ ++ + G + +SG K Sbjct: 153 WGSESLKKKY-----LPRLATNTVGSFCLSEPVSGSDAFALATKATETESG-FKISGSKM 206 Query: 233 WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS 292 W +S ++ FI+ A ++ G + + D G + + K+G ++++T L F Sbjct: 207 WITNSMEAEFFIVFANLDPSKGYRGITAFIVDKDTKGFSIAKKEKKLGIKASSTCVLNFD 266 Query: 293 NT---FGFLLGDLNVSTGPVEDMKILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRH 343 + LLG+ + K I L+ + + LA A+ Y Sbjct: 267 DVEVPKENLLGERG------QGYKYAISLLNEGRIGIGAQMTGLALGAWENAVKYVWNDR 320 Query: 344 VSGGILIDQ-PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM-APITK 401 G L+ + M+ IA +I AA AL + A R +EA +M A + K Sbjct: 321 KQFGQLVGEFQGMQHQIAQSYTEITAARALVYNAA--------RKKEAGENFVMDAAMAK 372 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + ++A V A+E +GG G++ E + +R+S +I G+ N + + L+K Sbjct: 373 LYASQVAGRVSGLAVEWMGGMGFVREGLAEKFWRDSKIGAIYEGTSNIQLNTIAKTLQK 431 >gi|328544859|ref|YP_004304968.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum SL003B-26A1] gi|326414601|gb|ADZ71664.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum SL003B-26A1] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 18/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ I + +K DG Y ++G K F+++ +++ I++A+ + +G Sbjct: 129 IAMTEPGAGSDLQGIKTTARK--DGNHYVINGSKTFITNGQLANLIIVVAKTDPSLGAKG 186 Query: 258 VPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 V L+ E G R +KIG + N T EL F + LLG G + M+ Sbjct: 187 VSLLVVETDKVEGFRRGRNLDKIGLKGNDTSELFFEDVRVPADALLG-AEEGRGFYQLME 245 Query: 314 ILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L L A +++ + +L + Y + R G ++D + +A++ + Sbjct: 246 QLPQERLLVACQAMAAIERALTVTLDYVKERKAFGKAILDFQNTQFKLAELKTEATIGRV 305 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ +R + A + KYW + V+ E ++ GG GY+ E IA Sbjct: 306 F-------VNDCIARHIAGGLDSVTASMAKYWTTDLQCKVMDECLQLHGGYGYMNEYPIA 358 Query: 432 RHYRESPANSILLGSGNAM 450 R Y ++ I G+ M Sbjct: 359 RLYADARVQRIYAGTNEIM 377 >gi|71653384|ref|XP_815330.1| acyl-CoA dehydrogenase [Trypanosoma cruzi strain CL Brener] gi|70880378|gb|EAN93479.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 401 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259 +TE G+D+AAI + +K D Y ++G K W + +++ + +LA EG +G F+V Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318 D + G+ + + +G R + T + F + ++ + NV P + KI + Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259 Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 AI +V+ + ++ EA YA +R G + + + +AD+A I AA L+ Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D+ +S + A+ A++ A C + A++ GG+G+ + + Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372 Query: 434 YRESPANSILLGS 446 YR++ SI G+ Sbjct: 373 YRDAKIFSIYEGT 385 >gi|124266967|ref|YP_001020971.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1] gi|124259742|gb|ABM94736.1| putative acyl-CoA dehydrogenase [Methylibium petroleiphilum PM1] Length = 617 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 59/312 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI--------YCLSGHKWFLSS---------------- 237 L+E + G+ + +T++ + +G Y LSGHK ++S Sbjct: 160 LSEPQAGSSLGDVTTRARPDGEGSEHDPLGPRYRLSGHKMWISGGEHELTENIVHLVLAK 219 Query: 238 -PMSDAFIMLAQVEGRVGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELE 290 P D + A V+G + F+VP+ L G N + L +K+G R L Sbjct: 220 IPADDG-TLPAGVKG-LSLFIVPKWLVQPGGRLTGERNDVALAGLNHKLGYRGTTNTLLN 277 Query: 291 FSNTF---GFLLGDLNVSTG-PVEDMKILIY----------LDSAIMSVSGMRVSLAEAI 336 F G G + G P E ++ + + L + ++ +G SLA A Sbjct: 278 FGEGRFRPGGAAGAVGYRVGAPGEGLRCMFHMMNEARIGVGLGAVMLGYAGYESSLAYAK 337 Query: 337 HYARRRHVSGGILIDQPV-------MKRAIADIALDIAAATALSFRLANSFDEAKS---- 385 + R + PV +KR + + AL+ A D+ +S Sbjct: 338 QRPQGRPLGAKDAGRPPVAIVEHADVKRMLLAQKAYVEGGLALALYCARLVDDKRSGSAT 397 Query: 386 -RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 ++E ++ PI K W + + A++ +GGSGY + + +H+R++ N I Sbjct: 398 EQAEAGVLLELLTPIAKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQHWRDNRLNMIHE 457 Query: 445 GSGNAMVLDVLN 456 G+ LD+L Sbjct: 458 GTHGIQGLDLLG 469 >gi|330464927|ref|YP_004402670.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] gi|328807898|gb|AEB42070.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora maris AB-18-032] Length = 382 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 64/302 (21%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK 232 W PK+ S E G GLTE G+D ++ + + DG + ++G K Sbjct: 110 WLPKLLSGE-------------ALAGFGLTEPGTGSDAGG--TETRAVLDGDEWVINGSK 154 Query: 233 WFLSSPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283 F+++ +D A + + V G + +VP G+P G +K+G + Sbjct: 155 AFITNSGTDITALVTVTAVTGTRPDGAKELSTIIVP----SGTP-GFTVAPGYSKVGWTA 209 Query: 284 NATVELEFSNTFGFLLGDLNVSTGPVEDM---------KILIYLDSAIMSVSGMRVSLA- 333 + T EL F D V P E++ + L LD ++++ + V LA Sbjct: 210 SDTHELTFD--------DCRV---PAENLLGERGRGFAQFLRILDEGRIAIAALAVGLAQ 258 Query: 334 ----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEE 389 E+I YAR RH G + + ++ +AD +++ A TA RLA + +A +R Sbjct: 259 GCVDESIKYARERHAFGQPIGNYQAIQFKVAD--MEMKAHTA---RLA--YYDAAARMLA 311 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 + A I K +A EA + GG G++ E +AR +R+S + +G G + Sbjct: 312 GEPFKRQAAIAKLHASTIAVDNAREATQIHGGYGFMNEYPVARFWRDS--KILEIGEGTS 369 Query: 450 MV 451 V Sbjct: 370 EV 371 >gi|317407234|gb|EFV87217.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter xylosoxidans C54] Length = 376 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-IMLAQV 249 M + + + LTE G+D+ A+ ++ ++ D Y L G K F+++ ++ I+LA Sbjct: 112 MARGDIIGAIALTEPGAGSDLKAVRTRARRDGDH-YVLDGQKTFITNGVNAGLAIVLAST 170 Query: 250 EGRVGC-FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVS 305 + +G L +E+G P G +KIG T EL F LLG N + Sbjct: 171 DPDLGARGLSLFCVEEGQP-GFTKGTPLSKIGQHCQDTCELYFDGLRLPVDCLLGRENNA 229 Query: 306 ----TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 T + ++ I L A S+ GM + EA Y R R V G +ID + Sbjct: 230 FEYLTQELARERLAIAL-RAGASLEGM---IDEAAEYTRNRKVFGRRVIDYQNSR----- 280 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A+A A + L D+ + A I K +M A++ + ++ GG Sbjct: 281 --FKLASARAQATMLRVFLDDCLEKHMAGELDATRAAIAKLNATEMQGAILDDLLQLYGG 338 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E I R + ++ A + G+ M Sbjct: 339 YGYMAEYGIGRAWADARALRLFGGTSEIM 367 >gi|294675581|ref|YP_003576196.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294474401|gb|ADE83789.1| glutaryl-CoA dehydrogenase [Rhodobacter capsulatus SB 1003] Length = 402 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A++ + +K +DG Y L+G K W ++P++D F++ A+ E G++ Sbjct: 144 FGLTEPDAGSDPASLKTVAKKTADG-YVLTGSKMWISNAPIADVFVVWAKSEAHGGKIKG 202 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ + L+ GL ++ K+ R++ T E+ G +G+ + G VE +K Sbjct: 203 FVLEKGLK-----GLSAPKIAGKLSLRASITGEIVME---GVEVGEDALLPG-VEGLKGP 253 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADIALDIAAA 369 L+ A ++ + AE +A R++ D+P+ + +A++ DI Sbjct: 254 FGCLNRARYGIAWGVMGAAEFCFHAARQYGLDRKQFDKPLAQTQLYQLKLANMLTDITLG 313 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + ++ DEA + E M + K C A A + GG+G E Sbjct: 314 LQAALQVGRLMDEANAAPE-------MISLIKRNNCGKALEAARNARDMHGGNGISESFQ 366 Query: 430 IARH 433 + RH Sbjct: 367 VIRH 370 >gi|295687526|ref|YP_003591219.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295429429|gb|ADG08601.1| acyl-CoA dehydrogenase domain protein [Caulobacter segnis ATCC 21756] Length = 387 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 20/262 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI-MLAQVE---GRVGC 255 + +TE G+D+ I + +K + Y L+G K F+++ + I ++A+ + G G Sbjct: 131 IAMTEPGAGSDLQGIKTTAKKAGNQ-YVLNGSKTFITNGQTANLICVVAKTDPAGGARGT 189 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 L+ +E G R +K+G + T EL F++ LLG + G + M Sbjct: 190 SLI--FVETDGAEGFERGRNLDKLGQEAQDTSELFFNDVKVPTENLLG-TDEGQGFFQLM 246 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L L+ A+ ++ + +L I Y + R G ++D + +A+ + A Sbjct: 247 SQLPQERLNIAVQGMATIERALELTIAYVKDRKAFGKAILDFQNTQFVLAECKTEATVAK 306 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 E K + A+ A KYW + ++ ++ GG G++ E I Sbjct: 307 VFVNHCIGQHLEGKLDAATASMA-------KYWVSDLENKIVDRCLQLFGGYGFMNEYPI 359 Query: 431 ARHYRESPANSILLGSGNAMVL 452 AR Y++S I G+ M L Sbjct: 360 ARMYKDSRIQRIYGGTNEIMKL 381 >gi|226308675|ref|YP_002768635.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226187792|dbj|BAH35896.1| probable acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 383 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 35/306 (11%) Query: 152 MSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDI 211 M A +++L T + P++ + E T + LTE GG+D+ Sbjct: 86 MGGHTVVAKLISLFGTEEQKVKYLPRMATGEIRAT-------------MALTEPGGGSDL 132 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGS 266 A+T+ + + W ++ S +L + + G +V L+E G Sbjct: 133 QAMTTNAKSDGTDLVVNGAKTWITNARRSGVIALLCKTDPSASPRHAGISIV--LVEHG- 189 Query: 267 PNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTGPVEDMKILIYLDSAI 322 GL R K+G + + EL F N L G G + + A Sbjct: 190 -EGLTVSRDLPKLGYKGVESCELSFDNYRIAESAILGGTPGKGFGQMMKGLETGRIQVAC 248 Query: 323 MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 ++ +L +++ YA++R G + + +AD+A + AA L++ A +D Sbjct: 249 RALGVATAALEDSLAYAQQRESFGQPIWKHQSIGNYLADMATKLTAARQLTWHAAQMYDS 308 Query: 383 AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSI 442 + EA A++ A ++A + A+ GG GY E + R++R++P + Sbjct: 309 GERCDMEAGMAKLYA-------SEVAMEIALSAVRIHGGYGYSTEYDVERYFRDAPL--M 359 Query: 443 LLGSGN 448 ++G G Sbjct: 360 IVGEGT 365 >gi|312884112|ref|ZP_07743824.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368160|gb|EFP95700.1| isovaleryl-CoA dehydrogenase [Vibrio caribbenthicus ATCC BAA-2122] Length = 389 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 30/278 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + Y L+G K W + P +D ++ A+ G + Sbjct: 130 LAMSEPNAGSDVVSMQLRAE-LEGEYYRLNGSKMWITNGPDADVVVVYAKTAPDQGSKGI 188 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 L + + +G + + +K+G R + T EL F + +LG++N + +K+L Sbjct: 189 TAFLVEKTFDGFSHAQKLDKLGMRGSNTCELVFKDCMVPVENVLGEVN------QGVKVL 242 Query: 316 IY-LD-SAIMSVSG----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD ++ +G M+ L I Y R G + + +++ +AD+ AA Sbjct: 243 MSGLDYERVVLAAGPLGIMQACLDLVIPYVHDRKQFGRSIGEFQLVQAKVADMYTRTNAA 302 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + +A + D ++ ++AA + + ++A + +A++ +GG+GYI E Sbjct: 303 RAYLYAVAKACDAGQTTRKDAAGVIL-------YNAELATQMSLDAIQLLGGNGYINEYP 355 Query: 430 IARHYRESPANSILLGSGNAMVLDVLNLLEKGTNLFEQ 467 R R++ I G+G + + +L G LFE+ Sbjct: 356 AGRLLRDAKLYEI--GAGTSEIRRML----IGRELFEE 387 >gi|299768736|ref|YP_003730762.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] gi|298698824|gb|ADI89389.1| acyl-CoA dehydrogenase [Acinetobacter sp. DR1] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKNKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIDYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A ++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLTREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|226940974|ref|YP_002796048.1| isovaleryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] gi|226715901|gb|ACO75039.1| Probable isovaleryl-CoA dehydrogenase [Laribacter hongkongensis HLHK9] Length = 388 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 33/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D + L+G K W + +D ++ A+ + G Sbjct: 126 LAMSEPNAGSDVVSMKLRAEAAGD-RFILNGSKMWITNGGDADVLVVYAKTDPAAG---- 180 Query: 259 PR-----LLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 PR ++E G P G + +K+G R + T L F N G + G +NV Sbjct: 181 PRGITAFIVEKGMP-GFSHGPKLDKLGMRGSNTYPLFFDNVDIPAENVLGSVGGGVNVLM 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G ++ + ++ A + M+ L A Y R G + D +M+ +AD+ + + Sbjct: 240 GGLDYERAVL----AAGPLGIMQACLDVAEPYLAERQQFGQPIGDFQLMQGKLADMYVTL 295 Query: 367 AAATALSFRLANSFD---EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +A+ A + + + D + +S ++AA A + + + A + +A++C+GG+G Sbjct: 296 SASRAYVYAVGRALDAGYQGRSVRKDAAGAIL-------YAAENATRLALDAIQCLGGNG 348 Query: 424 YIEERSIARHYRESPANSILLGS 446 YI + R R++ I G+ Sbjct: 349 YINDYPAGRLLRDAKLYEIGAGT 371 >gi|114656347|ref|XP_510308.2| PREDICTED: isovaleryl Coenzyme A dehydrogenase isoform 8 [Pan troglodytes] gi|332843533|ref|XP_001143110.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 5 [Pan troglodytes] Length = 423 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|16877964|gb|AAH17202.1| Isovaleryl Coenzyme A dehydrogenase [Homo sapiens] gi|30583129|gb|AAP35809.1| isovaleryl Coenzyme A dehydrogenase [Homo sapiens] gi|61362788|gb|AAX42280.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct] gi|61362792|gb|AAX42281.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct] gi|123984092|gb|ABM83503.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct] gi|123998235|gb|ABM86719.1| isovaleryl Coenzyme A dehydrogenase [synthetic construct] Length = 423 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|330835655|ref|YP_004410383.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567794|gb|AEB95899.1| acyl-CoA dehydrogenase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 361 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 31/244 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 L+E G+D ++ ++ +K+S G++ +SG K +++ M +D F++ A+ ++G FLV Sbjct: 108 FALSEPCCGSDTRSMKTRAEKVS-GVWRVSGEKMWITQGMYADVFLVAAKTSEKIGTFLV 166 Query: 259 PRLLEDGSPNGLCYQRLKNKI-GNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY 317 +D C +R K ++ GNR T ++ + L+G V+ + +I Sbjct: 167 RE--QD------CVEREKIEVSGNRGTGTAKIRLNECEADLIGGWQVTKYALSIGRI--- 215 Query: 318 LDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 ++S + + LA EA +A R G L++ ++ +D D+ + +L Sbjct: 216 ------AISAIAIGLALGATEEAYGWAEERTAFGKKLLEHEGVQWMFSDSIADLESVKSL 269 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 +F+ +E + K K+A V+ ++ +GG GY + R Sbjct: 270 LDVTCKAFENNWEMAEP------LIAALKLVSSKIANNVVDRMVQIMGGMGYAKSTRTER 323 Query: 433 HYRE 436 YR+ Sbjct: 324 AYRD 327 >gi|29830933|ref|NP_825567.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] gi|29608046|dbj|BAC72102.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680] Length = 608 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 45/287 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR---- 252 LTE G+D+ A ++ + DG + + G K F++S MS+ + +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKAVQQEDGSWHIEGVKRFITSGEHDMSENILHYVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGD 301 + FLVP+ D G NG +++K+G +++ T E+ F + G+L+GD Sbjct: 224 KGLSLFLVPKYEFDFETGELGERNGAYATNVEHKMGLKASNTCEMTFGDRHPAKGWLIGD 283 Query: 302 LNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID-------- 351 + G + +I+ + + ++S + A+ YA R V G L + Sbjct: 284 KH--DGIRQMFRIIEFARMMVGTKAISTLSTGYLNALEYATER-VQGPDLANFMDKTAPK 340 Query: 352 -----QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEA-------AYARIMAPI 399 P ++R++ AL A D+ + + A ++ PI Sbjct: 341 VTITHHPDVRRSLMTQKAYAEGMRALVLHTAAIQDDIQVKESAGEDTTALEALNDLLLPI 400 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 K + + +A++++ GGSG+++E I ++ R++ +++ G+ Sbjct: 401 VKGYGSEKGYEQLAQSLQTFGGSGFLQEYPIEQYIRDAKIDTLYEGT 447 >gi|167647017|ref|YP_001684680.1| acyl-CoA dehydrogenase domain-containing protein [Caulobacter sp. K31] gi|167349447|gb|ABZ72182.1| acyl-CoA dehydrogenase domain protein [Caulobacter sp. K31] Length = 379 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 34/264 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ--VEGRVGCFLV 258 LTE G+D A + + + D Y L+G K F+S +SD ++++A+ V+G G + Sbjct: 124 LTEPGSGSDAANMRTTARLDGDH-YVLNGGKAFISGGGVSDVYVVMARTGVDGAKG--VS 180 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVST 306 ++E G+P GL + + K+G S T + F + GF + + Sbjct: 181 AFVVEKGTP-GLSFGANERKMGWNSQPTAAVNFDDCRVPVANRIGQEGEGFRFAMMGLDG 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G L+ A S+ G +L A Y R G L D ++ +AD+A ++ Sbjct: 240 G---------RLNIASCSLGGAAFALDTAKAYLETRKQFGKPLKDFQALQFKLADMATEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + R A++ D ++ + + + K + V +A++ GG GY++ Sbjct: 291 EAARLMVRRAAHALDNRDPQATK------LCAMAKRFATDAGFQVANDALQLHGGYGYLQ 344 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + + R R+ + IL G+ M Sbjct: 345 DYPLERIVRDLRVHQILEGTNEIM 368 >gi|111019337|ref|YP_702309.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110818867|gb|ABG94151.1| long-chain-acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length = 381 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 29/298 (9%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + +TT + W PK + E + +G+TE GG+D+A++ + Sbjct: 97 APYLVQLTTEEQKQRWLPKFCTGE-------------LLTAIGMTEPSGGSDLASLKTTA 143 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D + ++G K F+++ +D I+ A+ + + G R + Sbjct: 144 VKDGDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLD 202 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332 K+G + T EL F N ++G+++ G + M++L + +A+ +++ L Sbjct: 203 KVGQHESDTAELFFENVRVPSTNIIGEID--RGFIHMMEMLPQERVGAAVSNIAHAAPIL 260 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 E I YA+ R G + K +AD+ + A + + + + +AA Sbjct: 261 EETIQYAKDRKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAK 320 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ V+ ++ GG G++ E AR + ++ I GS M Sbjct: 321 A-------KWWTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIM 371 >gi|254283480|ref|ZP_04958448.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] gi|219679683|gb|EED36032.1| glutaryl-CoA dehydrogenase [gamma proteobacterium NOR51-B] Length = 395 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 30/266 (11%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 F E P T IG GLTE G+D + ++ + + DG Y LSG K W + Sbjct: 118 FGTEAQREKYLPKLATGEWIGCFGLTEPDYGSDPGGMVTRARTV-DGGYSLSGAKMWISN 176 Query: 237 SPMSDAFIMLAQV-EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF 295 SP++D F++ A+ +G + F +LE G P GL +++ K+ R++ T E+ + Sbjct: 177 SPIADVFVVWAKTDDGVIRGF----VLEKGMP-GLSAPKIEGKLSLRASITGEIVMEDVV 231 Query: 296 ---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 LL D+ GP L++A ++ + AE +A R + ++ Sbjct: 232 VGEDALLPDVEGLKGPFS------CLNNARYGIAWGALGAAETCWHAARDYTMERKQFNR 285 Query: 353 P-----VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM 407 P +++ +AD+ +I+ A R D + E + + K C Sbjct: 286 PLAANQLVQLKLADMQTEISLALQGCHRAGVLMDAGQIAPE-------LISLIKRNSCGK 338 Query: 408 APAVIAEAMECIGGSGYIEERSIARH 433 + V +A + +GG+G +E + RH Sbjct: 339 SLDVARKARDMLGGNGISDEYPVMRH 364 >gi|195064828|ref|XP_001996645.1| GH22516 [Drosophila grimshawi] gi|193895423|gb|EDV94289.1| GH22516 [Drosophila grimshawi] Length = 424 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 121/265 (45%), Gaps = 38/265 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L ++E G+D+ ++ + ++ D Y L+G K+++++ SDA M+ V + G VP Sbjct: 163 LAMSEPGAGSDVVSMKLRAERKGD-YYVLNGSKFWITNG-SDAETMV--VYAKTGASGVP 218 Query: 260 R-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--- 309 ++E G Q+L +K+G R ++T E+ F DL V + Sbjct: 219 DRHAITAFIVETGWEGFSVAQKL-DKLGMRGSSTCEIVFQ--------DLKVPAKNILGK 269 Query: 310 EDMKILIYLDS--------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 E+ + + + A V M+ + A YA +R G ++ + +++ +AD Sbjct: 270 ENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFDYAHQRKQMGKLIGEFQLIQGKMAD 329 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + +++A + + +A S D S++ A + +C + A + +A++ +GG Sbjct: 330 MYTNLSACRSYLYAVARSCDAGVKSSKDCAGVIL-------YCAEKATQLALDAIQILGG 382 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 +GYI E R R++ I G+ Sbjct: 383 NGYINENPTGRILRDAKLYEIGAGT 407 >gi|118468931|ref|YP_889088.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118170218|gb|ABK71114.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 382 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEG-----RV 253 + +TE G+D+A + + + D Y ++G K F++ + +D +++A+ R Sbjct: 124 IAMTEPGTGSDLAGVRTTAVRDGDH-YVVNGAKTFITGGIQADLVVVVARTSTDPDNRRK 182 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV--ED 311 G L+ ++EDG G R K+G + T EL F+ D+ V V E+ Sbjct: 183 GLTLL--VVEDGMA-GFSRGRELEKMGCKVQDTAELSFT--------DVRVPVANVLGEE 231 Query: 312 MKILIYLDS---------AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + YL A+ SV+ R ++ AI Y + R G + K +A Sbjct: 232 GEAFSYLGHNLAQERLTVAVGSVAQARSAIDAAIDYTKTRKAFGTPVASFQNTKFELAAC 291 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + ++ AA A+ D A + + + A K +C +M V+ ++ GG Sbjct: 292 SAEVEAAQAM-------LDRAVALHVDGELSGADAARVKLFCTEMQARVVDRCLQLFGGY 344 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y ++ I G+ M Sbjct: 345 GYMMEYPIARLYTDARVARIYAGTSEVM 372 >gi|77360399|ref|YP_339974.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas haloplanktis TAC125] gi|76875310|emb|CAI86531.1| Acyl-CoA dehydrogenase family protein [Pseudoalteromonas haloplanktis TAC125] Length = 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC------ 255 LTE G+D A++ ++ + D Y ++G K F+S ++ V R GC Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEVLV---VMARTGCDGPKGI 179 Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+VP G+ Y + + K+G + T + F + + N+ E K Sbjct: 180 SAFIVP-----ADAKGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAHNLLGAEGEGFK 231 Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 + ++ A S+ + +L A Y + R G L ++ IAD+ ++ Sbjct: 232 FAMQGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFKIADMNTELV 291 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA + RLA +F + SE+ Y + K + + V +A++ GG GYI+E Sbjct: 292 AARQM-VRLA-AFKLDNNDSEKTTYC----AMAKRFATDVGFTVCNDALQIHGGYGYIKE 345 Query: 428 RSIARHYRESPANSILLGSGNAM 450 + RH R+ + IL G+ M Sbjct: 346 YPLERHVRDVRVHQILEGTNEIM 368 >gi|327280200|ref|XP_003224841.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Anolis carolinensis] Length = 422 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 32/262 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D Y L+G+K W + P +D I+ A+ + V Sbjct: 161 LAMSEANAGSDVVSMRLKADRKGD-YYVLNGNKFWITNGPDADVLIVYAKTDPSA----V 215 Query: 259 PR-------LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNV 304 P ++E G P Q+L +K+G R + T EL F N G L + V Sbjct: 216 PASQGITAFIVEKGMPGFSTAQKL-DKLGMRGSNTCELIFEDCKIPAKNVLGQLSKGVYV 274 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + D++ LI L + + + M+ L A+ Y R G + +M+ +AD+ Sbjct: 275 LMSGL-DLERLI-LSAGPLGI--MQAVLDNAVPYMHVREAFGQKIGQFQLMQGKMADMYT 330 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + + + +A + D +++ A + A + A V + ++C+GG+GY Sbjct: 331 RLMSCRQYVYNVARACDRGHFNAKDCAGVILYAA-------ECATQVALDGIQCLGGNGY 383 Query: 425 IEERSIARHYRESPANSILLGS 446 I + + R R++ I G+ Sbjct: 384 INDYPMGRFLRDAKLYEIGAGT 405 >gi|326473320|gb|EGD97329.1| acyl-CoA dehydrogenase [Trichophyton tonsurans CBS 112818] Length = 435 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K S G Y L+G K W +S + FI+ A ++ G + Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + + G + + K+G R+++T L F + LLG+ + K I Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288 Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + ++ LA A + R G ++ M+ +A +IAAA Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL F A + + ++AA A++ + ++A V A+E +GG G++ E Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +R+S +I G+ N + + L+K Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431 >gi|301773964|ref|XP_002922405.1| PREDICTED: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Ailuropoda melanoleuca] Length = 441 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 39/280 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIML 246 P + IG L +TE G+D+ I + +K DG + L+G K F+++ +SD I++ Sbjct: 170 PQMTSGKCIGALAMTEPGAGSDVQGIRTNAKK--DGSDWILNGSKVFITNGWLSDVLIVV 227 Query: 247 AQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FG 296 A + FLV E G + Q+L+ K+G ++ T EL F + Sbjct: 228 AVTNHEAHSPAHGISLFLV----ESGMKGFIKGQKLQ-KMGLKTQDTAELFFEDVRLPAS 282 Query: 297 FLLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 LLG+ N + P E + I A +++S E +Y + R G + Sbjct: 283 ALLGEENKGFYYLMQELPQERLLI------ADLAISASEFMFEETRNYVKERKAFGKTIA 336 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPA 410 ++ +A++ I A D E+ A + KYW ++ Sbjct: 337 HMQTVRHKLAELKTQICVTRAF-------VDSCLQLHEKKRLDSATASMAKYWASELQNR 389 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V + ++ GG GY+ E IA+ Y ++ A I G+ M Sbjct: 390 VAYDCVQLHGGWGYMWEYPIAKAYVDARAQPIYGGTNEIM 429 >gi|284043121|ref|YP_003393461.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] gi|283947342|gb|ADB50086.1| acyl-CoA dehydrogenase domain protein [Conexibacter woesei DSM 14684] Length = 390 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 121/260 (46%), Gaps = 35/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D++ + + K D + ++G K F+++ ++ + + A+ + G Sbjct: 125 LTEPDAGSDVSGMKTTAVKKGDK-WVINGSKCFITNGSHANFYTVYAKTDKDAGHRGISA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F+VPR G+ + ++K+G R++ T + F L+G+ N + Sbjct: 184 FIVPR------DAGVVVDKKEDKMGQRASNTATITFPEVEIPADHLIGEEN------KGF 231 Query: 313 KI-LIYLDSAIMSVSGM-----RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 K+ ++ LD V+ M R ++ A+ Y++ R G + ++ IAD+A +I Sbjct: 232 KLAMMTLDRTRPGVAAMATGIARAAMEFAVDYSKERVQFGVPIAMHQAIQFMIADMATEI 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ L+++ A D + + +++A+ A T A V +A++ GG G+I+ Sbjct: 292 EASRLLTWKAAFQLDNGERNTLVSSHAKRFAADT-------AMRVATDAVQVYGGYGFIK 344 Query: 427 ERSIARHYRESPANSILLGS 446 E + + R++ + G+ Sbjct: 345 EYPVEKLMRDAKIMQLYEGT 364 >gi|322825515|gb|EFZ30450.1| acyl-CoA dehydrogenase, putative [Trypanosoma cruzi] Length = 401 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 25/253 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGCFLVP 259 +TE G+D+AAI + +K D Y ++G K W + +++ + +LA EG +G F+V Sbjct: 150 VTEPGAGSDVAAIKTFAKKKGDA-YVVNGQKMWITNGGVANWYFLLANSDEGFIG-FVV- 206 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL- 318 D + G+ + + +G R + T + F + ++ + NV P + KI + Sbjct: 207 ----DANTPGITPGKKEINMGQRCSDTRGIVFEDV---VIPEANVLGKPGDGFKIAMRAF 259 Query: 319 -----DSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 AI +V+ + ++ EA YA +R G + + + +AD+A I AA L+ Sbjct: 260 DFTRPPVAIGAVAVAQRAMEEARDYANQRKAMGKYVSEHQSIAFMLADMAAGIEAARLLA 319 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D+ +S + A+ A++ A C + A++ GG+G+ + + Sbjct: 320 YRAAWEVDQGRSNTYYASSAKLFAAEHCERC-------VTAAVQIFGGNGFNTGYPVEKL 372 Query: 434 YRESPANSILLGS 446 YR++ SI G+ Sbjct: 373 YRDAKIFSIYEGT 385 >gi|260907334|ref|ZP_05915656.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2] Length = 384 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 36/268 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLV 258 + +TE G+D+ ++ ++ + D Y ++G K F+S+ D +++A+ G V Sbjct: 128 IAMTEPGTGSDLQSVKTKAVRDGDE-YVVNGSKTFISNGTHCDILVIVARTSEEPGAKGV 186 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVS---TG 307 ++ E G R+ +K+G R T EL F N G + G + Sbjct: 187 SLIVAEVADLPGFSRGRVLDKVGQRGQDTRELFFEDMRVPVDNVLGGVEGRGFIQLMQQL 246 Query: 308 PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKR-----AIADI 362 P E M I A+ + ++ EA+ YA+ R G QP+MK +A+ Sbjct: 247 PQERMAI------AVAGATTAEAAVREAVAYAKEREAFG-----QPIMKFQNTKFVLAEC 295 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 A ++ + L + K +E+A+ KYW VI ++ GG Sbjct: 296 ATEVFSTRTFVDHLTQLHIDGKLTTEQASAG-------KYWATDAQTNVIDRCLQVFGGY 348 Query: 423 GYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR Y ++ I G+ M Sbjct: 349 GYMMEYPIARMYADARVQKIYGGTNEIM 376 >gi|73541869|ref|YP_296389.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] gi|72119282|gb|AAZ61545.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region [Ralstonia eutropha JMP134] Length = 389 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 17/242 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E G+D+AA+ Q + G Y + G K W + ++D + + + G + Sbjct: 130 LSEPDAGSDVAAMRCSAQLDAGGTHYVIDGAKTWISNGGIADFYCVFVRTGEAPGARGIS 189 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 + D GL + + AT L F N G LG+ V M + I Sbjct: 190 AFVVDADTPGLSIAERIDVMAPHPLAT--LRFDNCRVPVGNRLGEAGQGF-KVAMMTLDI 246 Query: 317 YLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + S + G R +L EA+ AR R + GG+L D + + AI D+A I AA L++R Sbjct: 247 FRASVAAAALGFGRAALDEALARARARPMFGGVLADLQLTQAAIGDMATAIDAAALLTYR 306 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D R + EAA A+++A + A VI A++ GG G + Y Sbjct: 307 AAWLRDVKGVRTTREAAMAKMVA-------TENAQQVIDRAVQMFGGLGVKVGTRVEGLY 359 Query: 435 RE 436 RE Sbjct: 360 RE 361 >gi|23013421|ref|ZP_00053318.1| COG1960: Acyl-CoA dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 383 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 50/261 (19%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE G+D A++ + +K D Y ++G K F++ +P + F ++A+ G Sbjct: 122 FALTEPNAGSDAASLRTTARKDGDH-YIVNGTKRFITNAPEASIFTLMARTNPENKGAGG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305 + F+V E SP GL ++ K+G + T ++ F +N G + G Sbjct: 181 ISAFIV----EADSP-GLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGVEGQ---- 231 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 G MK+L D + +S V ++E ++ YA R G + + +++ +A Sbjct: 232 -GFKTAMKVL---DRGRLHISATCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKM----APAVIAE-A 415 D + AA + A D+ + S EAA CCKM A IA+ A Sbjct: 288 DSKTEAYAARCMVLDAARKKDQGINVSTEAA------------CCKMFASEAVGRIADRA 335 Query: 416 MECIGGSGYIEERSIARHYRE 436 ++ GG+GYI + I R YR+ Sbjct: 336 VQVHGGAGYIADYGIERFYRD 356 >gi|239787384|emb|CAX83860.1| Isovaleryl-CoA dehydrogenase [uncultured bacterium] Length = 390 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 18/254 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + G + Sbjct: 131 LAMSEPGAGSDVVSMRLKAEKKGD-RYILNGTKFWITNGPDADVLVVYAKTDPAAGSKGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY- 317 L + G + +K+G R + T EL F + + + NV + + +L+ Sbjct: 190 TTFLVEKGFKGFSVAQKLDKLGMRGSNTGELVFQDC---EVPEENVLNAIGKGVNVLMSG 246 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD ++G M+ + + Y R G + +M+ +AD+ + A A Sbjct: 247 LDYERAVLAGGPLGIMQACMDVVVPYVHERKQFGEPIGHFQLMQGKLADMYTTLNACKAY 306 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA A + + W + EA++ +GG+GYI + R Sbjct: 307 VYAVARACDLGETTRKDAAGAILYSAEKATW-------MALEAIQTLGGNGYINDYPTGR 359 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 360 LLRDAKLYEIGAGT 373 >gi|163746186|ref|ZP_02153545.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] gi|161380931|gb|EDQ05341.1| acyl-CoA dehydrogenase-like protein [Oceanibulbus indolifex HEL-45] Length = 386 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 32/261 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ +K +D + L+G+K W + P ++ ++ A+ + G + Sbjct: 128 LAMSEVGAGSDVVSMKLNAEKRNDH-FRLNGNKYWITNGPDAETLVVYAKTDPEAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + S G +K+G R + T EL F + F +LG+ + +++L Sbjct: 187 TAFLIEKSMKGFTTSNHFDKLGMRGSNTAELIFDDCEVPFENILGEEG------KGVRVL 240 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD + ++G M L E + Y R G + D +M+ +AD+ + +A Sbjct: 241 MSGLDYERVVLAGIGLGIMAACLDEIMPYMAERKQFGQRIGDFQLMQGKMADMYTAMNSA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYI 425 A + +A + D ++AA CC + A +A++ +GG+GY+ Sbjct: 301 RAYVYSVAQACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGYL 349 Query: 426 EERSIARHYRESPANSILLGS 446 + + R +R++ I G+ Sbjct: 350 SDNPVGRIFRDAKLMEIGAGT 370 >gi|226958412|ref|NP_002216.2| isovaleryl-CoA dehydrogenase, mitochondrial isoform 1 precursor [Homo sapiens] gi|119612819|gb|EAW92413.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens] gi|119612821|gb|EAW92415.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_a [Homo sapiens] Length = 426 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 150 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 194 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 195 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 251 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 252 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 306 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 307 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 365 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 366 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 412 >gi|125051|sp|P26440|IVD_HUMAN RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; Flags: Precursor gi|306897|gb|AAA52711.1| isovaleryl-coA dehydrogenase (IVD) [Homo sapiens] gi|6636436|gb|AAF20182.1| isovaleryl dehydrogenase [Homo sapiens] gi|189054861|dbj|BAG37702.1| unnamed protein product [Homo sapiens] Length = 423 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 47/295 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKIPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 + + A V + ++C GG+GYI + + R R++ I G+G + V Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEI--GAGTSEV 409 >gi|71002638|ref|XP_756000.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293] gi|66853638|gb|EAL93962.1| acyl-CoA dehydrogenase [Aspergillus fumigatus Af293] gi|159130054|gb|EDP55168.1| acyl-CoA dehydrogenase [Aspergillus fumigatus A1163] Length = 437 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 18/266 (6%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 +A TP + W PK+ + + LG+TE G+D+A I + + Sbjct: 133 IARFGTPEQRRRWLPKV-------------ARGDIRFCLGITEPDAGSDVANIQTTARLD 179 Query: 222 SDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 D Y ++G K ++++ + + A G G + L+ + G+ +R+ N N Sbjct: 180 GDH-YVVNGAKKWITNGIWADYCTAAVRTGGPGRNGISLLVIPLTAPGVTRRRMHNSGVN 238 Query: 282 RSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHY 338 S +T L+F + L+G N + L A ++ RV +A HY Sbjct: 239 ASGSTF-LQFEDVRVPADNLIGKENKGFPIIMSNFNPERLTLACAALRLARVCAEDAFHY 297 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A +R G LI + ++ I L I A A +L N + K R + M Sbjct: 298 AVQRETFGAPLIQRQAIQSKIFRFGLMIEPAYAFMEQLVNIIELTKDRPADDVKIGGMTA 357 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGY 424 + K + + EA + +GG+GY Sbjct: 358 LLKVMSTRALEKSVREAQQILGGAGY 383 >gi|297528548|ref|YP_003669823.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] gi|297251800|gb|ADI25246.1| acyl-CoA dehydrogenase domain protein [Geobacillus sp. C56-T3] Length = 386 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 19/265 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T IG LTE G++ AAI + + D Y ++G K ++++ + + F ++A Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAAIKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304 + G + + + G +++ K+G R + + EL F N + NV Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLRGSHSAELFFDN---LEVPAENVLGR 227 Query: 305 -STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361 G V +KIL + + + + G + L E + YA +R G +I+Q ++ +A+ Sbjct: 228 EGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAE 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +++ I ++ +R+A D+ +EAA I K + ++ + A++ GG Sbjct: 288 MSMLIEVLSSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY+++ I R++R++ I G+ Sbjct: 341 LGYMKDYPIERYFRDARITKIYEGT 365 >gi|295135469|ref|YP_003586145.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87] gi|294983484|gb|ADF53949.1| acyl-CoA dehydrogenase [Zunongwangia profunda SM-A87] Length = 454 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 39/265 (14%) Query: 191 MQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV 249 MQK GLTE G+ +A K + L+G K W ++ +D I+ A+ Sbjct: 186 MQKLEKIGAFGLTEPNVGSGVAGGLETTCKFDGENWILNGQKKWIGNATFADVTIIWARD 245 Query: 250 E--GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR--SNATV-----------ELEFSNT 294 E +V FLV E +P G +++++K+ R NA + L+ +N+ Sbjct: 246 EDSNQVKGFLV----EKDNP-GFKAEKMEDKMALRIVQNAIITLTDCKVAESDRLQNANS 300 Query: 295 FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV 354 F L ++ V A +V R + A+ Y R+R G + + Sbjct: 301 FKDTANVLRMTRAGV-----------AWQAVGCARGAYESALKYTRKREQFGRPIASYQL 349 Query: 355 MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAE 414 ++ + ++ ++ A L FRL+ D+ E A+ A++ +C V++ Sbjct: 350 VQNHLVEMVSNLTAMQTLCFRLSEMQDQDMLTDEHASLAKV-------YCSMRMRDVVSR 402 Query: 415 AMECIGGSGYIEERSIARHYRESPA 439 A E +GG+G + E +AR ++ A Sbjct: 403 AREVMGGNGILLEHDVARFVADAEA 427 >gi|169634301|ref|YP_001708037.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii SDF] gi|169794664|ref|YP_001712457.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|184159528|ref|YP_001847867.1| acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213157964|ref|YP_002320762.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|215482254|ref|YP_002324436.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|239504119|ref|ZP_04663429.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB900] gi|301345859|ref|ZP_07226600.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB056] gi|301511362|ref|ZP_07236599.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB058] gi|301596586|ref|ZP_07241594.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB059] gi|332851547|ref|ZP_08433524.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332867746|ref|ZP_08437818.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332873481|ref|ZP_08441432.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] gi|169147591|emb|CAM85452.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii AYE] gi|169153093|emb|CAP02163.1| putative acyl-CoA dehydrogenase [Acinetobacter baumannii] gi|183211122|gb|ACC58520.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii ACICU] gi|213057124|gb|ACJ42026.1| acyl-CoA dehydrogenase [Acinetobacter baumannii AB0057] gi|213987120|gb|ACJ57419.1| Acyl-CoA dehydrogenase, C-terminal domain protein [Acinetobacter baumannii AB307-0294] gi|322509438|gb|ADX04892.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii 1656-2] gi|323519459|gb|ADX93840.1| Acyl-CoA dehydrogenase [Acinetobacter baumannii TCDC-AB0715] gi|332729892|gb|EGJ61224.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013150] gi|332733752|gb|EGJ64904.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6013113] gi|332738306|gb|EGJ69182.1| acyl-CoA dehydrogenase protein [Acinetobacter baumannii 6014059] Length = 385 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 12/264 (4%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 + ++E G+D+AAI + +K D Y ++G K W +S +D F +LA Sbjct: 123 IAVSEVHAGSDVAAIKTTAKKDGDD-YVINGSKMWITNSLQADFFCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 ++ G+ + NK+G RS T ++ N L+G + Sbjct: 182 SMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQE 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 L + ++ G+ + + I Y + R G LI+ + A++ ++ A AL+++ Sbjct: 242 ERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTYQ 301 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 + ++ A+ A++ A +++ V ++ GG+G++ + ++ YR Sbjct: 302 ACEQHIAGEDVTKLASMAKLKA-------GRLSREVADSCLQYWGGNGFMWDNPASQLYR 354 Query: 436 ESPANSILLGSGNAMVLDVLNLLE 459 + SI G+ M+ + L++ Sbjct: 355 DGRLGSIGGGADEIMLGIICKLMD 378 >gi|309812945|ref|ZP_07706673.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp. Ellin185] gi|308433017|gb|EFP56921.1| acyl-CoA dehydrogenase, middle domain protein [Dermacoccus sp. Ellin185] Length = 615 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 66/351 (18%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + ++G K F++S SD +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKATQNDDGTWNITGVKRFITSAESDMVDNVVHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F+VP+ D G NG +++K+G + + T E+ F + G LLGD Sbjct: 224 KGLSLFIVPKFHVDLETGELGERNGAYVTNVEDKMGLKVSTTCEVTFGDGAPAVGTLLGD 283 Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI----DQP 353 ++ +E+ ++ + +++ + A+ YA+ R V G + D P Sbjct: 284 VHDGIAQMFKVIENARMFV----GTKAIATLSTGYLNALEYAKER-VQGADMTTPQKDAP 338 Query: 354 --------------VMKRAIADIALDIAAATALSFRLANSFDEAKSRS--EEAAYARIMA 397 ++++A A+ + TA + + + + EE + A + A Sbjct: 339 RVTITHHPDVRRSLMLQKAYAEGLRSLVMYTACQQDVVDQATKGNPAAELEEGSPAEMAA 398 Query: 398 -------PITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 PI K + A ++ E+++ GGSG+++E + ++ R++ +++ G+ Sbjct: 399 RLNDLLLPIVKGVGSERAWVLLGTESLQTYGGSGFLKEYPLEQYVRDAKIDTLYEGTTAI 458 Query: 450 MVLDVLNLLEKGTNLFEQLFSTLEQDLGSSGKKVITILRDSISLCKEDKGL 500 LD F ++ LG K++ T + + K + GL Sbjct: 459 QGLDF---------FFRKIVKDQGVALGMLQKEIETTIGQAPEALKREAGL 500 >gi|221118085|ref|XP_002160610.1| PREDICTED: similar to Isobutyryl-CoA dehydrogenase, mitochondrial [Hydra magnipapillata] Length = 288 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256 LTE G+D +++++ ++ D Y L+G K F+S + SD + ++A+ G + CF Sbjct: 33 LTEPDSGSDASSLSTNARQDGDH-YILNGSKMFISGAGESDIYAIMARSGGPGSKGITCF 91 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 LV E G+ GL + + + K+G S T ++ N G N++ + Sbjct: 92 LV----EKGTA-GLEFGKKEKKVGWNSQPTRSVILDNCKVPAKNIIGQRGQGFNIAMNAL 146 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 +I I A S+ + SL A+ Y + R G L D + +A++ ++ A+ Sbjct: 147 NGGRISI----ASCSLGAAQKSLDLALDYVKSRKQFGKPLADFQNTQFKLAEMLTNLTAS 202 Query: 370 TALSFRLANSFDEAKSRSEE-AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L A + D +S + AA A++ A + C A++ GG GY+++ Sbjct: 203 RLLVRHAATAIDNHQSNAPVLAAMAKLQATDKCFELCNT-------ALQLHGGYGYLKDY 255 Query: 429 SIARHYRESPANSILLGSGNAM 450 + + R++ + IL G+ M Sbjct: 256 QVQQFMRDTRVHQILEGTNEVM 277 >gi|118373206|ref|XP_001019797.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila] gi|89301564|gb|EAR99552.1| Acyl-CoA dehydrogenase, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 417 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 29/254 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D ++ ++ +K D Y L+G K W +SP++D F++ A Sbjct: 147 PRLATGELIGCFGLTEPNHGSDPGSMETRAKKDGDD-YILNGSKTWITNSPIADIFVVWA 205 Query: 248 QVE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS- 305 + E G + F++ + ++ GL +++ K+ R++ T + N LNV Sbjct: 206 KDEQGDIRGFVLEKGMK-----GLTAPKIEGKLSLRASITGMILMDNVRVHKSQMLNVKG 260 Query: 306 -TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAI 359 GP L++A +S + AE +A R++ + P ++++ Sbjct: 261 LKGPFS------CLNNARFGISWGALGAAEYCFHAARQYTLDRKQFNVPLASFQLIQKKF 314 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +IA A +++ D E M + K C + + EA + + Sbjct: 315 ADMQTEIALALQACLQVSRLKDSGNLAPE-------MISLVKRNSCMKSIQICREARDML 367 Query: 420 GGSGYIEERSIARH 433 GG+G +E I RH Sbjct: 368 GGNGIADEYHILRH 381 >gi|91777396|ref|YP_552604.1| putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91690056|gb|ABE33254.1| Putative acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 379 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 37/306 (12%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T ++W P P+ + + + +TE G+D+ +I Sbjct: 93 SDITAPYIVRLGTEEQKRNWLP-------------PICRGEKILAIAMTEPGTGSDLKSI 139 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y ++G K F+S+ ++ D +++ + + G V ++ + G Sbjct: 140 RTTAVRDGDD-YVINGSKTFISNGLNCDMVVVVCKTDPSAGAKGVSLIMVETDRAGFRRG 198 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLN------VSTGPVEDMKILIYLDSAIMS 324 R K+G + T EL F N L+G+ N + P E + I +Y Sbjct: 199 RKLEKVGQAAADTAELFFDNVRVPATNLIGNENGGFIHLMEELPQERLIIAVY------C 252 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + + L + Y + R + D K +AD+ A L E K Sbjct: 253 AAKLERQLELTLQYVKDRRAFNQTVWDFQNTKFKLADVKAQAVAVRTLVDYYIREHMERK 312 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 +EAA A++ A W C I E ++ GG GY+ E IAR + + I Sbjct: 313 LTLQEAAIAKLFA-TEAMWKC------IDEMVQLHGGYGYMLEYPIARAFADMRVTRIFG 365 Query: 445 GSGNAM 450 G+ + Sbjct: 366 GTSEVL 371 >gi|330875099|gb|EGH09248.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 387 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ IAD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + +A++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|306839890|ref|ZP_07472688.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653] gi|306405076|gb|EFM61357.1| acyl-CoA dehydrogenase family protein [Brucella sp. NF 2653] Length = 592 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 42/297 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAY----ARIMAP 398 +I+ P ++R + + AA ++++ A++ D + + +A + A ++ P Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHVTDGADAQFWSDRAGLLTP 398 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|288920066|ref|ZP_06414385.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288348549|gb|EFC82807.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length = 401 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 39/284 (13%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 T + + PKI S E+ + LTE+ G+D A + + + DG + Sbjct: 107 TEEQRQTYLPKIASGEWTAS-------------FALTEEGAGSDPAGLATTAVRKDDG-W 152 Query: 227 CLSGHKWFLS-SPMSDAFIMLAQVE------GRVGCFLVPRLLEDGSPNGLCYQRLKNKI 279 ++G K +++ +P +D ++ A+ + + F+V R G+ K+ Sbjct: 153 VINGSKRYITNAPSADVLMVFARTDPAATGGDGISVFMVER-----DTPGVSVAPKDVKM 207 Query: 280 GNRSNATVELEFSNTF----GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLA 333 G + T ++ F + + G+ G M+ L + + A + V + + Sbjct: 208 GQAGSLTADVHFDDVRVGPETLVGGEAGEGRGYRTAMRCLAHGRIHIAALCVGMAQRLVD 267 Query: 334 EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA 393 E++ YA R G ++ +++ +AD A D+ AA AL + A +FD+ Sbjct: 268 ESVAYAASRSQGGQVIGTYQLIQGLLADSATDLYAARALVTQTAAAFDDGSD-------T 320 Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 RI KY+ + + A++ GG+GY+ + R YR++ Sbjct: 321 RIGPSCAKYFASEAVGRIADRAVQIHGGAGYMRGVPVERFYRDA 364 >gi|86131523|ref|ZP_01050121.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] gi|85817968|gb|EAQ39136.1| acyl-CoA dehydrogenase [Dokdonia donghaensis MED134] Length = 380 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 40/278 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D + + D Y L+G K W + SD ++++AQ + G Sbjct: 125 LSEPEAGSDATSQATTAIDKGDH-YVLNGTKNWITNGGRSDVYLVIAQTDREKGHRGINA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303 F+V + +E G ++K+G R + T L+F++ FGF Sbjct: 184 FIVEKGME-----GFEVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 +S G I + + + ++ LA + Y++ R G + + + +AD+ Sbjct: 239 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++I AA L + A D+ + + +A A++ + K+A EA++ GG+G Sbjct: 290 VEIEAARHLVMKAAWDKDQGNNYDQSSAMAKL-------YASKVAMEQTVEAVQIHGGNG 342 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 +++E + R R++ I G+ + + L KG Sbjct: 343 FVKEYHVERLMRDAKITQIYEGTSEIQKIVISRSLIKG 380 >gi|302521377|ref|ZP_07273719.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] gi|302430272|gb|EFL02088.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. SPB78] Length = 382 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 23/267 (8%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D A + ++ + D + L+G K W ++ +S+ + ++A Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174 Query: 249 VE-GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS-- 305 + G+ + ++E G G+ + + K+G + + T E+ F N + D + Sbjct: 175 TDPGKRSKGISAFVVEKGD-EGVSFGAPEKKLGIKGSPTREVYFDNVR--IPADRMIGAE 231 Query: 306 -TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 TG MK L D ++++ + +A+ A Y + R G + D ++ + Sbjct: 232 GTGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFML 288 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+A+ I+AA AL+++ A + + + + Y A K + +A V +A++ + Sbjct: 289 ADMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLL 342 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG GY + + R R++ I G+ Sbjct: 343 GGYGYTRDYPVERMMRDAKITQIYEGT 369 >gi|188575652|ref|YP_001912581.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520104|gb|ACD58049.1| acyl-CoA dehydrogenase 1 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 391 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GL+E +GG+D AA+T++ + DG + L+G K W + ++ I+ A Sbjct: 126 PEMATGRVIGCFGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKMWITNGSIAGLAIIWA 184 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + V FLV + G + +K+ R++ T L N F L + G Sbjct: 185 HTDDGVRGFLV-----ETDSAGFSAHDISHKMSLRASVTSGLFLDNVFVPERMRLPEAAG 239 Query: 308 PVEDMKILIYLDSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 + L I ++ L EA+ YA R + G L + +AD+A Sbjct: 240 LKAPLSCLNQARYGIAWGAIGAAVACLREALTYAGERILFGRPLAATQSAQIKLADMARG 299 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 I+ A L+ +L + R E+ + A K+ C+MA + E + +G +G Sbjct: 300 ISTAQLLALQLGRLKEAGTLRPEQISLA-------KWNNCRMALDIARECRDLLGAAGIT 352 Query: 426 EERSIARH 433 E RH Sbjct: 353 TEHVAIRH 360 >gi|111219692|ref|YP_710486.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111147224|emb|CAJ58874.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] Length = 392 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 29/278 (10%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ + + + LTE GG+D A++ + DG + + G K F++ +P++D F++ A Sbjct: 119 PLIAGTSSASICLTEPHGGSD--ALSPRTTARLDGDEWVIDGSKTFITNAPIADVFLVFA 176 Query: 248 QVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLL 299 + G R G +E +P GL + +K+ RS+ T E+ N ++ +L Sbjct: 177 RTSGENRRARGGTAF---FVEKDTP-GLSVGQPFDKLSLRSSPTAEVFLDNVRVSWDQVL 232 Query: 300 GDLNVS-TGPVEDMKILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKR 357 G++++ +E + + + A S +G+ + L A+ Y+ +R V G L + + Sbjct: 233 GEVDMGFYYMLEGLDLERVFEGA--SNTGIAQACLELAVEYSGQRTVFGEQLSSYQLTQD 290 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 IA IA + + + + L + + + +A I K + ++A E ++ Sbjct: 291 KIARIATGVEMSRVMFYHLIRELERGEELTRSSA-------ILKLYSSQVAVEASREVVQ 343 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 +GG G +EE AR YR++ + I G+G + ++ V+ Sbjct: 344 ILGGYGLMEEYPAARLYRDAKHHEI--GAGTSEIMKVI 379 >gi|91779013|ref|YP_554221.1| butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400] gi|91691673|gb|ABE34871.1| Butyryl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 377 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 28/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP----MSDAFIMLAQVEGRVG--C 255 LTE + G++ + ++ + DG + L+G K F+++ ++ F + G+ G Sbjct: 125 LTEPQAGSEANNLRTRA-VLRDGKWILNGSKQFVTNGARAHVAIVFAVTDPDRGKRGLSA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 F+VP +P G + ++K+G R++ T + + + + N+ P E ++I Sbjct: 184 FIVP----TDTP-GFNVGKPEHKLGIRASDTCPISLDDC---AVPEANLLGEPGEGLRIA 235 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALDIAAA 369 L L+ + ++ + +A A A R + S G L + + +AD+A + AA Sbjct: 236 LSNLEGGRIGIAAQALGIARAAFDAARLYASERIQFGKALKEHQTIANMLADMATRLNAA 295 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L A E K EA+ A++ A ++A + + A++ GG GY+E+ + Sbjct: 296 RLLVHHAARLRTEGKPCLSEASQAKLFAS-------ELAEEICSNAIQIHGGYGYLEDYA 348 Query: 430 IARHYRESPANSILLGS 446 + RHYR++ I G+ Sbjct: 349 VERHYRDARITQIYEGT 365 >gi|54022972|ref|YP_117214.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54014480|dbj|BAD55850.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 386 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 15/251 (5%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E+ G+D A++ ++ ++ D + L+G K W + S + ++A + G + Sbjct: 130 LSEREAGSDAASMRTRARQDGDD-WILNGSKCWITNGGKSSWYTVMAVTDPDKGANGISA 188 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDS 320 + G L++K+G + + T EL F N + GD + L LD Sbjct: 189 FMVHKDDEGFVVGPLEHKLGIKGSPTAELYFENC--RIPGDRIIGEPGTGFKTALQTLDH 246 Query: 321 AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 ++ V LA+ AI Y + R G + D + +AD+A+ I AA + + Sbjct: 247 TRPTIGAQAVGLAQGALDAAIAYTKDRKQFGQAIADFQNTQFMLADMAMKIEAARLMVYT 306 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A A++ E I A K + +A V A++ GG+GY + + R R Sbjct: 307 SA-----ARAERGEKNLGFISAA-AKCFASDVAMEVTTNAVQLFGGAGYTTDFPVERMMR 360 Query: 436 ESPANSILLGS 446 ++ I G+ Sbjct: 361 DAKITQIYEGT 371 >gi|302343877|ref|YP_003808406.1| butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075] gi|301640490|gb|ADK85812.1| Butyryl-CoA dehydrogenase [Desulfarculus baarsii DSM 2075] Length = 384 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLA------QVEGR 252 LTE G+D A I + + D + L+G K F+++ ++D + A + G Sbjct: 123 FALTEPEAGSDAANIQTTAELKGDH-WVLNGRKHFITNGDIADVATVFAANDRQKKARGG 181 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVS 305 + F+V + G ++ K+G R + T EL F N G G+ NV Sbjct: 182 ITAFIVEKTFP-----GFYVGTIERKMGLRGSHTCELIFDDCRVPRENVIG---GETNVG 233 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 G MK L D +++ + A+ +I YA++R G + + ++ +A Sbjct: 234 QGFKTAMKTL---DKGRLTMGASALGSAQKLMDLSIAYAKQRVQFGQPIANFQAIQIKLA 290 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A I AA + + A R + A A + K +C +MA A++ G Sbjct: 291 DMATHIYAARQMLYHAA------WLRDKRGAAVVKEASMVKLFCTEMANRAADMAVQIHG 344 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY+ + + R YR+ +I G+ Sbjct: 345 GMGYVRDFPVERFYRDLRLTTIYEGT 370 >gi|254718592|ref|ZP_05180403.1| Acyl-CoA dehydrogenase [Brucella sp. 83/13] gi|265983568|ref|ZP_06096303.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] gi|264662160|gb|EEZ32421.1| acyl-CoA dehydrogenase domain-containing protein [Brucella sp. 83/13] Length = 592 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 42/297 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAY----ARIMAP 398 +I+ P ++R + + AA ++++ A++ D + + +A + A ++ P Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQAARSITYACAHAIDMSHVTDGADAQFWSDRAGLLTP 398 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 399 LAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|150376383|ref|YP_001312979.1| acyl-CoA dehydrogenase domain-containing protein [Sinorhizobium medicae WSM419] gi|150030930|gb|ABR63046.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium medicae WSM419] Length = 382 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 20/273 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQ 248 P+ V LTE G+D AA+ ++ + + Y L+G K F+S + +S +I++A+ Sbjct: 114 PLLTMDVLASYCLTEPGSGSDAAALKTKAVREGEA-YLLTGQKQFISGAGVSGLYIVMAR 172 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGD 301 G G + + + GL + + K+G + T V + N G Sbjct: 173 T-GEEGPKGISAFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDSVRVPVENRLGAEGEG 231 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 ++ ++ ++ I A S+ G + + +A+ Y + R G + + ++ +AD Sbjct: 232 FRIAMAGLDGGRLNI----AAASLGGAQSAFDKALAYVQGRRAFGKAIGEFQALQFRLAD 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A D+ A +R A++ D A + + + + K + AV +A++ GG Sbjct: 288 MATDLEIARTFLWRAASALDAADPEATK------LCAMAKRFVTDRCFAVANDALQLHGG 341 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVLDV 454 GY+ + + + R+ + IL G+ M L V Sbjct: 342 YGYLADYGVEKIVRDLRVHQILEGTNEIMRLIV 374 >gi|35186984|gb|AAQ84159.1| PlmL [Streptomyces sp. HK803] Length = 388 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 35/261 (13%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMS-DAFIMLAQVEGRVG 254 + I LTE GT A IT+ + D Y LSG K ++ M D +++ A+V G G Sbjct: 116 IKIAFALTEPGNGTG-ADITTSVVREGD-TYYLSGRKHLITFGMRCDYYLLAARVAGSAG 173 Query: 255 -----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 LVPR + G+ + +G + F T LG+ Sbjct: 174 HEGTVALLVPR-----NAPGVSAEDTSRTMGVTGTDHASIVFDRTPVPVDHRLGEEG--- 225 Query: 307 GPVEDMKILI--YLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAI 359 + +++ + +L + +SV+ V LA+ A+ YAR R G L ++ ++ + Sbjct: 226 ---QGLEVFLGGFLTPSRISVAMSCVGLAQRAQQLAVDYARSRVTFGKSLTERQAIQFML 282 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A+ A DI AA L A F+E A A + + + K M V +A++ Sbjct: 283 AENAADIEAARQLVLHAARRFEEG------ADDASMQSSMAKMHAVTMLTTVTDKALQVH 336 Query: 420 GGSGYIEERSIARHYRESPAN 440 GG GY + + I R YR++ A Sbjct: 337 GGLGYWKSQKIERVYRDARAQ 357 >gi|77404554|ref|YP_345130.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|77019935|dbj|BAE46310.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length = 386 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 35/306 (11%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S A +A T K W K S E + + +TE G+D+ A+ Sbjct: 98 STIVAHYIAAYATEDQKKRWLSKCASGE-------------SVLAIAMTEPGTGSDLQAV 144 Query: 215 TSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCY 272 + + G Y ++G K F+S + D +++A+ + G + L+ E + G Sbjct: 145 RTTAVR-DGGHYVINGSKTFISNASHCDLLVIVAKTDPSQGSKGISLLVAETENLPGFER 203 Query: 273 QRLKNKIGNRSNATVELEFS-------NTFGFLLGD-LNVSTGPVEDMKILIYLDSAIMS 324 R+ +KIG T EL F+ N G + G G ++ ++++ + ++ Sbjct: 204 GRVLDKIGQHGQDTRELSFTDMRVPAANLLGGVEGQGFYQLMGQLQRERLILGVGGVAVA 263 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 + + S I YA+ RH G +++ K +A+ D+ A L D Sbjct: 264 EAAVAES----IRYAKERHAFGKPILNFQNTKFVLAECKTDVLAGKTL-------MDHCI 312 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 R + A + K W ++ ++ GG GY+ E IA+ Y S I Sbjct: 313 QRHLDGTLDAATASMAKLWGSDKQCEIVDRCLQVFGGYGYMMEYPIAQMYAASRVQKIYG 372 Query: 445 GSGNAM 450 G+ M Sbjct: 373 GTNEIM 378 >gi|197099190|ref|NP_001125529.1| isovaleryl-CoA dehydrogenase, mitochondrial precursor [Pongo abelii] gi|68565360|sp|Q5RBD5|IVD_PONAB RecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; Flags: Precursor gi|55728362|emb|CAH90925.1| hypothetical protein [Pongo abelii] Length = 423 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 45/290 (15%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 147 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 191 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 192 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 248 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSG-----MRVSLAEAI 336 T EL F + +LG N ++ LD + ++G M+ L I Sbjct: 249 NTCELIFEDCKVPAANILGHENKGV-----YVLMSGLDLERLVLAGGPLGLMQAVLDHTI 303 Query: 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIM 396 Y R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 304 PYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL- 362 Query: 397 APITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V + ++C GG+GYI + + R R++ I G+ Sbjct: 363 ------YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 406 >gi|326800396|ref|YP_004318215.1| glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21] gi|326551160|gb|ADZ79545.1| Glutaryl-CoA dehydrogenase [Sphingobacterium sp. 21] Length = 452 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 47/278 (16%) Query: 180 SREYDPT-NKAPMQKTSVAIGLGLTEKRGGTDIAA-ITSQGQKISDGIYCLSGHK-WFLS 236 RE+ P NK MQK GLTE G+ A +T+ ++ ++G + L+G K W + Sbjct: 178 KREWLPQMNK--MQKIGA---FGLTEPEVGSGAAGGLTTTCKRTAEG-WVLNGQKKWIGN 231 Query: 237 SPMSDAFIMLAQV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR---------SNA 285 + +D ++ A+ +G+V F+ L+ +P G +++K K+ R + Sbjct: 232 ATFADLIVIWARDLDDGQVKGFI----LKKDTP-GFSVEKIKGKMALRIVQNGLITLKDC 286 Query: 286 TVE----LEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 VE L +N+F L ++ V A M+V R + A+ Y R+ Sbjct: 287 VVEEKDRLPHANSFKDTANVLRMTRAGV-----------AWMAVGCARGAYESALDYTRK 335 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + +++ + ++ ++ A L FRL+ D + + E A+ A++ Sbjct: 336 RKQFGKPIASFQLIQNHLVEMLSNLTAMQTLVFRLSELQDAGQLKDEHASLAKV------ 389 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 +C ++ +A E +GG+G + E +AR ++ A Sbjct: 390 -FCSLRTRDIVGQAREVMGGNGILLEHDVARFVADAEA 426 >gi|302546947|ref|ZP_07299289.1| acyl-CoA dehydrogenase [Streptomyces hygroscopicus ATCC 53653] gi|302464565|gb|EFL27658.1| acyl-CoA dehydrogenase [Streptomyces himastatinicus ATCC 53653] Length = 381 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 26/247 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV------EGRVG 254 LTE G+D + I ++ + D +Y L+G K F++ +P++ FI+ A+ G + Sbjct: 122 LTEAEAGSDPSGIRTRAVRDGD-VYVLNGSKRFITNAPLAGVFIVFARTGPQSTGPGGIS 180 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 F V D G+ +K+G + E+ F + L+G+ V Sbjct: 181 VFAV-----DADTPGVTVGPPDHKMGQSGALSAEVFFDDVRVPASALVGEREEEGFHVA- 234 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 M+ L L A M V R L E++ +A G + + +++ +A+ ++ AA Sbjct: 235 MRSLARGRLSVAAMCVGLARRMLDESVAHASVSRQGGRPIGEYQLVQAMLAESHAELYAA 294 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A+ A ++D + R R+ K +C +MA V A++ GG GY+ Sbjct: 295 RAMVLEAARAYDSGEDR-------RLAPSSAKLFCSEMAGRVADRAVQIHGGMGYMRHVP 347 Query: 430 IARHYRE 436 + R YR+ Sbjct: 348 VERFYRD 354 >gi|169632984|ref|YP_001706720.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii SDF] gi|169151776|emb|CAP00595.1| putative acyl coenzyme A dehydrogenase (HcaD-like) [Acinetobacter baumannii] Length = 381 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 119/311 (38%), Gaps = 47/311 (15%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214 S +A + + T + W PK+ + E V +G+TE G+D+ ++ Sbjct: 91 SEIAAPYILHIGTEEQKQYWLPKMVTGE-------------VVGAIGMTEPGAGSDLQSM 137 Query: 215 TSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQ 273 + + D Y L+G K F+S+ +D ++ + + + V LL D G Sbjct: 138 RTSA-ILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKGVSLLLVDTYLEGFKKG 196 Query: 274 RLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKILIYLD 319 +KIG S T EL F N F +L+ +L P E I Sbjct: 197 TNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQEL-----PRERTAI----- 246 Query: 320 SAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 A +V +R ++ A Y + R+ G + + +A +D A TA R Sbjct: 247 -ASTAVGAIRGAIDLATAYVKERYAFGQPISQFQNTRFVLAQAKIDELATTAFYERNVAL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 + E K E AA K + M V ++ GG GY+ E I+R + ++ Sbjct: 306 YQEGKLDVETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARI 358 Query: 440 NSILLGSGNAM 450 I G+ M Sbjct: 359 QRIYGGTNEIM 369 >gi|318056740|ref|ZP_07975463.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actG] gi|318080394|ref|ZP_07987726.1| putative acyl-CoA dehydrogenase [Streptomyces sp. SA3_actF] Length = 382 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 21/266 (7%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P+ K L+E G+D A + ++ + D + L+G K W ++ +S+ + ++A Sbjct: 116 PLAKGDAMFSYALSEPDAGSDAAGMKTKAVRDGD-FWVLNGVKRWITNAGVSEYYTVMAV 174 Query: 249 VEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS--- 305 + + + + S G+ + + K+G + + T E+ F N + D + Sbjct: 175 TDPGKRSKGISAFVVEKSDEGVSFGAPEKKLGIKGSPTREVYFDNVR--IPADRMIGAEG 232 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIA 360 TG MK L D ++++ + +A+ A Y + R G + D ++ +A Sbjct: 233 TGFATAMKTL---DHTRITIAAQALGIAQGALDYAKGYVQERKQFGKAIADFQGIQFMLA 289 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+ I+AA AL+++ A + + + + Y A K + +A V +A++ +G Sbjct: 290 DMAMKISAARALTYQAAAASERGDA---DLTYQGAAA---KCFASDVAMEVTTDAVQLLG 343 Query: 421 GSGYIEERSIARHYRESPANSILLGS 446 G GY + + R R++ I G+ Sbjct: 344 GYGYTRDYPVERMMRDAKITQIYEGT 369 >gi|293602794|ref|ZP_06685234.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292818810|gb|EFF77851.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 392 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 25/260 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMKLRADKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVED 311 L + G + +K+G R + T EL F N G + G + V Sbjct: 187 TAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFQDCEIPEENVLGQVNGGVKV------- 239 Query: 312 MKILIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMKRAIADIALDI 366 ++ LD +SG + + +A+ Y R G + + +++ +AD+ + Sbjct: 240 --LMSGLDYERAVLSGGPLGIMQAVMDVVVPYIHDRKQFGQAIGEFQLIQGKVADLYTTL 297 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A+ A +++ + D K +E R + + A + E ++ +GG+GYI Sbjct: 298 QASRAFCYQVGKNLD--KLGAEHVRQVRKDCAALILYTAEKATWMAGEGVQILGGNGYIN 355 Query: 427 ERSIARHYRESPANSILLGS 446 E + R +R++ I G+ Sbjct: 356 EYPVGRLWRDAKLYEIGAGT 375 >gi|226361475|ref|YP_002779253.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226239960|dbj|BAH50308.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 381 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 29/298 (9%) Query: 159 ASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A + +TT + W PK + E + +G+TE GG+D+A++ + Sbjct: 97 APYLVQLTTEEQKQRWLPKFCTGE-------------LLTAIGMTEPSGGSDLASLKTTA 143 Query: 219 QKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K D + ++G K F+++ +D I+ A+ + + G R + Sbjct: 144 VKDGDD-WIINGSKTFITNGYNADLVIVAARTSPEKKSKGITLFAVETGMEGFERGRKLD 202 Query: 278 KIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSL 332 K+G + T EL F N ++G+++ G + M++L + +A+ +++ L Sbjct: 203 KVGQHESDTAELFFENVRVPSANIIGEID--RGFIHMMEMLPQERVGAAVSNLAHAAPIL 260 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 E I YA+ R G + K +AD+ + A + + + + +AA Sbjct: 261 EETIQYAKDRKAFGQPIGSLQWNKFLLADLVTRVEVTQAYVDNCVAAHADGELTAVDAAK 320 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A K+W ++ V+ ++ GG G++ E AR + ++ I GS M Sbjct: 321 A-------KWWTAQVQNEVLDHCVQLHGGYGFMTEYRAARAWMDARVTKIWAGSNEIM 371 >gi|163753133|ref|ZP_02160257.1| acyl-CoA dehydrogenase [Kordia algicida OT-1] gi|161326865|gb|EDP98190.1| acyl-CoA dehydrogenase [Kordia algicida OT-1] Length = 392 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ-VEGRVGCFL 257 GLTE G++ +T+ + + D Y L+G K W +SP ++ A+ EGR+ + Sbjct: 136 FGLTEPDHGSNPGGMTTNYKDMGDH-YLLNGAKMWISNSPFCQIAVVWAKNEEGRIHGLI 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKI 314 V R +E G NK R++AT EL F N LL + + P Sbjct: 195 VERGME-----GFSTPETHNKWSLRASATGELIFDNVKVPKENLLPNKSGLGAP------ 243 Query: 315 LIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LDSA ++ + A A+ Y++ R G + + ++ +A++ +I A Sbjct: 244 LGCLDSARFGIAWGAIGAAMDCYDTALRYSKERIQFGKPIGQFQLQQKKLAEMITEITKA 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L++RL + K+ S + + A K +MA + EA + +GG G E S Sbjct: 304 QLLAWRLGVLRENGKATSAQISMA-------KRNNVEMALKIAREARQMLGGMGISGEYS 356 Query: 430 IARH 433 I RH Sbjct: 357 IMRH 360 >gi|326329794|ref|ZP_08196114.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325952380|gb|EGD44400.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 385 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 41/274 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQV-----EGR 252 + +TE G+D+A +T+ + DG Y L+G K F++ + +D I+ A+ E R Sbjct: 124 IAMTEPGTGSDLAGMTTNAKLTEDGKHYVLNGAKTFITGGVNADRVIVCARTAPATPEDR 183 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 G + L D G R +K+G + + T EL F+ D+ V PVED+ Sbjct: 184 RGGITL--LAVDTKLPGYEVGRKLDKLGLKVSDTAELSFT--------DVQV---PVEDV 230 Query: 313 -----KILIYLDSAI---------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRA 358 K YL + + + ++ A Y R V G + K Sbjct: 231 LGEVGKGFSYLGQNLPVERLGIAVGAYAQAAAAVEFAKAYVHDRKVFGTAVASFQNTKFE 290 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +A ++ AA A+ R + D + EAA A++ +C ++A VI ++ Sbjct: 291 LAACKAEVDAAEAVVDRAIEAEDAGTLTAAEAASAKL-------FCTEVAHRVIDRCLQL 343 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 GG GY+ E IAR Y ++ N I G+ M L Sbjct: 344 HGGYGYMNEYPIARLYADNRVNRIYGGTSEVMKL 377 >gi|126724791|ref|ZP_01740634.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] gi|126705955|gb|EBA05045.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2150] Length = 414 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D + + +K ++G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 156 FGLTEPDAGSDPGGMKTVAKKTANG-YVLNGSKMWISNAPIADVFVVWAKSEEHGGKIRG 214 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ D GL ++ NK+ R++ T E+ G +G+ + VE +K Sbjct: 215 FIL-----DKGMTGLSAPKIGNKLSLRASITGEIVMD---GVEVGE-DALLPNVEGLKGP 265 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A +S + AE A Y R G L + ++ +AD+ +I+ Sbjct: 266 FGCLNRARYGISWGVMGAAEFCWHSARQYGLDRKQFGKPLAGMQLYQKKLADMQTEISLG 325 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 S R+ DE + E M I K C A + + + GG+G E Sbjct: 326 LQASLRVGRLMDEGNAAPE-------MISIIKRNNCGKALDIARMSRDMHGGNGISAEFQ 378 Query: 430 IARH 433 I RH Sbjct: 379 IMRH 382 >gi|313236473|emb|CBY11788.1| unnamed protein product [Oikopleura dioica] Length = 414 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 35/269 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRV----- 253 + +TE G+D+ + + ++ D + ++G K F+++ +D I+ A + Sbjct: 154 IAMTEPGAGSDLQGMKTFAKRDGDD-WIINGSKVFITNGWHADMVIVCAITDPTAKSAAK 212 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN----TFGFLLGDLNVSTG-- 307 G L L+EDG P G R NKIG + T EL F + T L G+ ++ G Sbjct: 213 GISLF--LIEDGMP-GFNKGRKLNKIGLKGQDTAELFFDDLRVPTSAILGGEKGLNRGFG 269 Query: 308 ------PVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 P E ++LI + + M + Y + R G L ++ +A Sbjct: 270 MLMHELPRE--RLLI----TAQACATMEYAFECTREYVKERKAFGKTLSKLQTIQHDLAA 323 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 I DIA A N D + E+ A + KYW + +++ ++ GG Sbjct: 324 IKTDIAVAR-------NFTDTSIQMYEDGILDYNTASMGKYWVTEKNNENVSKMLQMFGG 376 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+ E IAR + +S SI GS M Sbjct: 377 WGYMWEYPIARMFADSRVYSIYGGSNEIM 405 >gi|307317497|ref|ZP_07596936.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306896655|gb|EFN27402.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] Length = 386 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251 L +TE G+D+ + + D + ++G K F+S F+++ G Sbjct: 122 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 180 Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 ++ CFLV R G+P G + N + +R L F + +LG+++ Sbjct: 181 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHKGF 235 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 D L A SV R + A+ YA R G + + +AD+ +I Sbjct: 236 DIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQGVSFKLADMITEI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+ A D+ + E A A++ A +M V EA++ GG G ++ Sbjct: 296 DAADLLTLSAAWRLDQGLPSNREIASAKVFA-------TEMLARVTDEAIQIYGGMGLMD 348 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 349 DLPLARFWRDARVERIWDGT 368 >gi|302551604|ref|ZP_07303946.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302469222|gb|EFL32315.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 386 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 27/275 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGRV--G 254 GLTE GG+D A + + S + ++G K F+++ +D + + V GR G Sbjct: 123 FGLTEPDGGSDAGATRTTARLDESTNEWVINGTKCFITNSGTDITGLVTVTAVTGRSADG 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVED 311 L+ ++ + G +K+G ++ T EL F++ LLG+ G + Sbjct: 183 KPLISSIIVPSTTPGFTVAAPYSKVGWNASDTRELSFTDVRVPAANLLGEEG--RGYAQF 240 Query: 312 MKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 ++IL D ++++ + LA E++ Y++ RH G + ++ IAD +++ Sbjct: 241 LRIL---DEGRIAIAALATGLAQGCVDESVKYSKERHAFGKPIAANQAIQFKIAD--MEM 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 A TA RLA + +A R A + A + K +A EA + GG G++ Sbjct: 296 KAHTA---RLA--WRDAAVRLVSGAPFKKEAALAKLHSSTVAVDNAREATQIHGGYGFMN 350 Query: 427 ERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 E +AR +R+S + +G G + V +L E G Sbjct: 351 EYPVARMWRDS--KILEIGEGTSEVQRMLIARELG 383 >gi|163855517|ref|YP_001629815.1| acyl-CoA dehydrogenase [Bordetella petrii DSM 12804] gi|163259245|emb|CAP41545.1| acyl-CoA dehydrogenase [Bordetella petrii] Length = 384 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/314 (21%), Positives = 135/314 (42%), Gaps = 27/314 (8%) Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200 Y AQL + +L + ++ V + V + PK+ S ++ + L Sbjct: 84 YHNAQLASAYL-TTAIYGGMQVKYGASAEVKAEILPKLVS-------------GALRLAL 129 Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVP 259 +TE G+D+A+I+++ + D Y +SG K +++ + M+D ++ + + Sbjct: 130 CITEPATGSDVASISTRAVQDGDD-YLISGQKVYITCAHMADYLVVATKTNPDARHKGIT 188 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILI 316 L D G+ + LK +G R T E+ F + + +LG+LN + + Sbjct: 189 LFLVDAHAPGVAVRPLKG-LGRRMIHTNEVFFDDVRVSSARMLGELNGGWRALMRGLNIE 247 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 L A + M + +A +A +R G + + AD+ + +A ++ + Sbjct: 248 RLCLAAAACGNMMRIIDDARDFATQRAQFGNPISSYQAIAHKFADMQIMATSARVMTLHV 307 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A D ++ + E A A++ A + C M M+ +GG+GY+ E + ++R+ Sbjct: 308 AEMLDAGQTPTMETAIAKVQATESNSRCADMG-------MQIMGGAGYMMEHPMQMYFRD 360 Query: 437 SPANSILLGSGNAM 450 + +I G+ M Sbjct: 361 ARVGTIGGGTSEIM 374 >gi|85374972|ref|YP_459034.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter litoralis HTCC2594] gi|84788055|gb|ABC64237.1| acyl-CoA dehydrogenase, short-chain specific [Erythrobacter litoralis HTCC2594] Length = 381 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 23/247 (9%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRVGC 255 + LG++E G+D+AAI ++ + D + ++G K W + SD FI + E V Sbjct: 123 VSLGISEPDVGSDVAAIKTRAVRDGD-FWVINGEKTWITNGAYSDIFICTCKTGENEVTH 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVE 310 LV R + + K + +S A + L +NT G + L + E Sbjct: 182 ILVDRDESEYEVRDI----QKMALNGQSTAQIFLTECRVPVANTIGRVGDGLRNTLQVFE 237 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + A+ S+ R ++ EAI YAR R G + ++ IA +A I AA Sbjct: 238 ----IARCHMAMWSIGIARRAMDEAIAYARDRAQHGKKIAGHQLIADKIAIMATKIDAAR 293 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 L+ R A S +A +R+E + K++ +MA +A++ GG+G E + Sbjct: 294 LLTHR-AISLVQAGTRAETE------CSMAKWYATEMAIEATRDALQIHGGNGVTREFIV 346 Query: 431 ARHYRES 437 R RE+ Sbjct: 347 ERLVREA 353 >gi|294650410|ref|ZP_06727772.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292823681|gb|EFF82522.1| isovaleryl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 390 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 36/286 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY +G L ++E G+D+ ++ + ++ D + L+G Sbjct: 113 QKYLPKLISGEY--------------VGALAMSEPNAGSDVVSMKLRAEQKGDH-FVLNG 157 Query: 231 HK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 K W + +D ++ A+ + G + L + G + +K+G R + T L Sbjct: 158 SKMWITNGGDADVLVVYAKTDPHAGAKGMTAFLIEKDMKGFSHGHHLDKLGMRGSNTYPL 217 Query: 290 EFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRH 343 F N + NV G K+L+ LD +S + + +A I Y +R Sbjct: 218 FFDNV---EVPVENVLGGVGNGAKVLMSGLDYERTVLSAGPLGIMDACMDVVIPYLHQRE 274 Query: 344 VSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA---KSRSEEAAYARIMAPIT 400 G L + +M+ +AD+ A AL + + + D+A +S ++AA A + A Sbjct: 275 QFGQALGEFQLMQGKLADMYSTWLACKALVYAVGAACDKADHDRSLRKDAASAILYAAEK 334 Query: 401 KYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 W + EA++ +GG+GYI E R +R++ I G+ Sbjct: 335 ATW-------MAGEAIQTLGGNGYINEFPAGRLWRDAKLYEIGAGT 373 >gi|226361029|ref|YP_002778807.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226239514|dbj|BAH49862.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length = 382 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 14/242 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L +TE GG+D+ + + + D + ++G K F++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTAAVRDGDH-FVVNGAKTFITSAVRADFVVTAVRTGGAGAAGVS 182 Query: 260 RL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L +E G+P G R +K+G R++ T EL F + L+G+ N + + Sbjct: 183 LLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPAANLVGEENSGFAQIAQAFLT 241 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 + A + S + L + + R R G LI + ++ + ++A A + Sbjct: 242 ERIALAAQAYSSAQRCLDLTLQWVRDRETFGRPLISRQSVQNTVTEMARRTDVARVYTRA 301 Query: 376 LAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 L S + E +A+ A W +A++ GG GY+ E + R Y Sbjct: 302 LVERSLVSNEDFIAEVCFAKNTAVEAGEWVAN-------QAVQLFGGLGYMRESEVERQY 354 Query: 435 RE 436 R+ Sbjct: 355 RD 356 >gi|195019873|ref|XP_001985073.1| GH14704 [Drosophila grimshawi] gi|193898555|gb|EDV97421.1| GH14704 [Drosophila grimshawi] Length = 419 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 33/261 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255 +TE G+D++ I ++ +K D Y L+G K W + +++ + +LA+ C Sbjct: 155 VTEPGAGSDVSGIKTRAEKKGDE-YVLNGQKMWITNGGVANWYFVLARTNPDPKCPASKA 213 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V R +P GL R + +G R++ T + F + + NV G Sbjct: 214 FTGFIVDR----DTP-GLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLVGEGAGF 265 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + D V+ V LA EA+ YA R G + ++ +AD+A+ + Sbjct: 266 KIAMGTFDKTRPPVAAGAVGLAQRCMDEALKYALERKTFGVPIAHHQAVQFMLADMAIGV 325 Query: 367 AAATALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + L++RL A D+ + S A+ A+ A MA + ++A++ GG+G+ Sbjct: 326 -ETSRLAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFN 377 Query: 426 EERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 378 SEYPVEKLMRDAKIYQIYEGT 398 >gi|195126441|ref|XP_002007679.1| GI12250 [Drosophila mojavensis] gi|193919288|gb|EDW18155.1| GI12250 [Drosophila mojavensis] Length = 420 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 33/261 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC----- 255 +TE G+D+A I ++ +K D Y ++G K W + +++ + +LA+ C Sbjct: 155 VTEPGAGSDVAGIKTRAEKKGDE-YVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKA 213 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 F+V R GL R + +G R++ T + F + + NV G Sbjct: 214 FTGFIVDR-----ETPGLTPGRKEQNMGQRASDTRGITFEDV---RVPKENVLIGEGAGF 265 Query: 313 KILI-YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 KI + D V+ V LA EA+ YA R G + ++ +AD+A+ + Sbjct: 266 KIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAHHQAVQFMLADMAIGV 325 Query: 367 AAATALSFRL-ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + L++RL A D+ + S A+ A+ A MA + ++A++ GG+G+ Sbjct: 326 ETSR-LAWRLSAWEIDQGRRNSYYASIAKCHA-------ADMANKIASDAVQIFGGNGFN 377 Query: 426 EERSIARHYRESPANSILLGS 446 E + + R++ I G+ Sbjct: 378 SEYPVEKLMRDAKIYQIYEGT 398 >gi|167566097|ref|ZP_02359013.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis EO147] Length = 398 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K + Y L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGE-RYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M L I Y R G + + +++ IAD+ A A Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + D + S A+ R + A + Y K A + EA++ +GG+GYI E Sbjct: 305 LYTVGRHLDAGGTASAGGAHVRQVRKDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEY 363 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 364 PVGRLWRDAKLYEIGAGT 381 >gi|50556786|ref|XP_505801.1| YALI0F23749p [Yarrowia lipolytica] gi|49651671|emb|CAG78612.1| YALI0F23749p [Yarrowia lipolytica] Length = 417 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 36/249 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQ--KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCF 256 GLTE G+D ++ + + G+ L+G K W +SP++D ++ A+++G++ F Sbjct: 156 FGLTEPNHGSDPGSMETVAKMHPTKKGVIVLNGAKNWITNSPIADLMVVWAKLDGKIRGF 215 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPV 309 LV R +GL +KNK R++ T VE+ N F + G GP Sbjct: 216 LVER---SQVASGLATPAIKNKTALRASITGMIQMDDVEIPVENMFPEVTG----LKGP- 267 Query: 310 EDMKILIYLDSAIMSVS-GMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIA 363 L+SA ++ G +L+E+I AR R+ G L ++++ +AD Sbjct: 268 -----FTCLNSARYGIAWGTMGALSESIKLAREYSLDRKQFKGQPLAKYQLIQKKLADAL 322 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 D + ++ D E + + K C A A ME GG+ Sbjct: 323 TDATYGQVAAIQVGRLKDAGNCPPE-------LISMIKRQNCDRALAGARNLMEIFGGNA 375 Query: 424 YIEERSIAR 432 +E I R Sbjct: 376 ASDEYHIGR 384 >gi|83854753|ref|ZP_00948283.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83941276|ref|ZP_00953738.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36] gi|83842596|gb|EAP81763.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83847096|gb|EAP84971.1| glutaryl-CoA dehydrogenase [Sulfitobacter sp. EE-36] Length = 407 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ K ++G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPAGMKTRAVKTANG-YKLTGSKMWISNAPIADVFVVWAKSEEHGGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F++ + ++ GL ++ NK+ R++ T E+ N LL + GP Sbjct: 208 FILEKGMK-----GLSAPKIGNKLSLRASITGEIVMDNVEVGEDALLPHVEGLKGP---- 258 Query: 313 KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIA 367 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 259 --FGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKKLADMQTEIA 316 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S ++ D A + E M I K C A + + + GG+G E Sbjct: 317 LGLQASLQVGRLMDNANAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISGE 369 Query: 428 RSIARH 433 + RH Sbjct: 370 FQVIRH 375 >gi|229030770|ref|ZP_04186796.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus AH1271] gi|228730532|gb|EEL81486.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus AH1271] Length = 382 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%) Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262 RGG QG+K + ++G K F + +P+ D FI+ A +EGR VG F++PR Sbjct: 136 RGGKPETIAVQQGEK-----WVINGRKTFTTMAPILDYFIISASIEGREEVGEFVIPR-- 188 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI--LIYLDS 320 + G+ + + + R A+ +L N NV G V+ I L+++ + Sbjct: 189 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIESRFFTNVLGGKVKQKGIGWLLHIPA 245 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + ++ + A + + + + P ++R + ++ L++ A +++A + Sbjct: 246 CYLGIAQAARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQIAKKY 305 Query: 381 DEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 DEA+ + S +A A + KY + +++ +AM +G E+ + R+Y Sbjct: 306 DEAEDKLSLQAELAAV-----KYAVTNASISIVDKAMRIVGAKSLSEKNPLHRYY 355 >gi|284034692|ref|YP_003384623.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283813985|gb|ADB35824.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 619 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 58/296 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC- 255 LTE G+D+ A ++ DG + + G K F++S D ++LA+ +G G Sbjct: 164 LTEPDAGSDVGAGRTKATLQDDGSWHIEGVKRFITSGEHDMTENIVHLVLARPQGIEGVG 223 Query: 256 ---------FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---G 296 F+VP+ D G NG ++ K+G + + T E+ F G Sbjct: 224 GPGTKGLSLFIVPKYDFDLETGELTGERNGAYVTNVEKKMGIKVSTTCEITFGENAPAKG 283 Query: 297 FLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID--- 351 +LLG+ V G + +++ Y + +++ + A+ YA++R V G L + Sbjct: 284 YLLGE--VHDGIAQMFQVIEYARMMVGTKAIATLSTGYLNALEYAKQR-VQGADLTNAAK 340 Query: 352 ---------QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYA--------- 393 P ++R++ A AL A D R+E+A YA Sbjct: 341 TAPRVTITHHPDVRRSLMTQKSYSEALRALVLFTATYQD----RAEQARYAGEHDDEAER 396 Query: 394 --RIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ P+ K + + + ++ E+++ GGSG++++ I ++ R++ +++ G+ Sbjct: 397 VNDLLLPLVKGYGSEKSWTLLGTESLQTFGGSGFLQDYPIEQYVRDAKIDTLYEGT 452 >gi|108798724|ref|YP_638921.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119867842|ref|YP_937794.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126434327|ref|YP_001070018.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108769143|gb|ABG07865.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119693931|gb|ABL91004.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126234127|gb|ABN97527.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length = 391 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 27/254 (10%) Query: 196 VAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE---- 250 V LTE G++ A + ++ + G + ++G K F++ +P +D F++ A+ Sbjct: 119 VVASFALTEPGAGSNPAGLRTKAVRDDAGDWVVNGQKRFITNAPTADLFVVFARTRPADD 178 Query: 251 --GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG---DL 302 + FLVP +G+ K+G T ++ F++ L+G D+ Sbjct: 179 RGAGIAVFLVP-----ADADGVEVGAKDAKMGQEGAWTADVNFTDVRVPASALVGGSEDI 233 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 + + +++ A ++V + +L E++ YA G + D +++ +AD Sbjct: 234 GYRAALITLARGRVHI--AALAVGAAQRALDESVAYAATATQGGTPIGDFQLVQAMLADQ 291 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + A AL A + + R RI K +C +MA V A++ GG+ Sbjct: 292 QTGVMAGRALVRDAARKWVTDEDR-------RIAPSAAKVFCTEMAGQVADLAVQIHGGT 344 Query: 423 GYIEERSIARHYRE 436 GY+ E + R YR+ Sbjct: 345 GYMREVPVERIYRD 358 >gi|148259637|ref|YP_001233764.1| acyl-CoA dehydrogenase domain-containing protein [Acidiphilium cryptum JF-5] gi|146401318|gb|ABQ29845.1| acyl-CoA dehydrogenase domain protein [Acidiphilium cryptum JF-5] Length = 391 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 30/266 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D AA+ ++ + D Y L G K F+S + +D ++++A+ G + F Sbjct: 134 LTEPGAGSDAAALKTKAVRDGDD-YVLDGVKQFISGAGATDLYLVMARSGGAGPRGISSF 192 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG----DLNVSTGPV 309 LVP+ GL + + K+G + T ++ F + F LG ++ + Sbjct: 193 LVPK-----DAKGLGFGANERKMGWNAQPTRQVVFESCRIPARFRLGAEGEGFRIAMSGL 247 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + ++ I S+ G + +L +A Y R G L D ++ +AD+A ++ AA Sbjct: 248 DGGRVNI----GACSLGGAQAALEKAQRYMGEREAFGRRLEDFQALQFRLADMATELEAA 303 Query: 370 TALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A + D ++ + A A+ +A T + V A++ GG GY+ E Sbjct: 304 RLFLWSAAAALDRGEADATRRCAMAKRIATDTGF-------NVANNALQLFGGYGYLAEY 356 Query: 429 SIARHYRESPANSILLGSGNAMVLDV 454 I + R+ + IL G+ M L V Sbjct: 357 GIEKIVRDLRVHQILEGTNEIMRLIV 382 >gi|116197905|ref|XP_001224764.1| hypothetical protein CHGG_07108 [Chaetomium globosum CBS 148.51] gi|88178387|gb|EAQ85855.1| hypothetical protein CHGG_07108 [Chaetomium globosum CBS 148.51] Length = 338 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 82/344 (23%), Positives = 130/344 (37%), Gaps = 73/344 (21%) Query: 54 VHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPG--GERWDKVEFHPAWHALLRRSI 111 + E LG+ VLS + A +N P L G G+ ++ W L I Sbjct: 16 ISPEAGQLGDDVLSQQIFDWVTDAEHNQPHLRGSGRDAFGKPVSELVVTEGWRKLQEFGI 75 Query: 112 HDGL-------------------HCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLM 152 G+ C +W+ S + A + AARL L L + Sbjct: 76 QKGIVALNYDSDYGPYNRLVEFIRCHLWEGSCANTLCPAAMQDGAARL-LQRHLSKETGL 134 Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIA 212 SP T RV ++ + SR DPT + G +TE+ GG+D+ Sbjct: 135 SP-----------TERRVFQNAFDHLTSR--DPTK-------AWTSGQWMTERTGGSDVP 174 Query: 213 AITSQG-----------------QKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC 255 + +KI G + +SG KWF S+ S I+LA+ + G Sbjct: 175 KTETVATYDPYPDVSSTPFADVDEKILLGPWSISGFKWFSSATDSQMTILLAKTDPSKGV 234 Query: 256 -------------FLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 + P + GS G+ QRLK+ +G +S T ELE +N G+L+G+ Sbjct: 235 SAYFAPMRSHNPSLVSPTGIRCGSELYGVTIQRLKHNLGTQSLPTDELELNNMRGWLIGE 294 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVS 345 + + + + + + SV M +LA + +A R S Sbjct: 295 EGQVIREINTILTITRVHTTVSSVGYMSRALAVSKGFALIRENS 338 >gi|332525843|ref|ZP_08401984.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332109394|gb|EGJ10317.1| acyl-CoA dehydrogenase domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 397 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 24/256 (9%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T IG GLTE G+D A++ ++ + + DG Y LSG K W +SP++D F++ A Sbjct: 122 PRLATGEWIGCFGLTEPDHGSDPASMATRARPV-DGGYVLSGSKMWITNSPIADVFVVWA 180 Query: 248 Q---VEGRVGCFLVPR--LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + +G G R +LE G GL +++ K+ R++ T E+ F + Sbjct: 181 KETDAQGAAGGQEAIRGYILERGM-KGLTAPKIEGKMSLRASITGEIVMDQVF---VPAE 236 Query: 303 NVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKR 357 N G L+ A ++ + AE +A RR+ G L ++++ Sbjct: 237 NKLPGVAGLKGPFGCLNKARYGIAWGALGAAEFCWHAARRYTLERKQFGRPLAQNQLIQK 296 Query: 358 AIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAME 417 +AD+ +I R+ DE ++ E M + K C A + A + Sbjct: 297 KLADMQTEITLGLQGCLRVGRLIDEGQAAPE-------MISLIKRNSCGKALDIARLARD 349 Query: 418 CIGGSGYIEERSIARH 433 GG+G +E + RH Sbjct: 350 MHGGNGIHDEFHVIRH 365 >gi|323450619|gb|EGB06499.1| hypothetical protein AURANDRAFT_60185 [Aureococcus anophagefferens] Length = 442 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 33/248 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GLTE G+D + S+ + S G Y L+G K W ++P++D ++ A+++G V F+ Sbjct: 175 FGLTEPDHGSDPDGMKSKAEFDASTGEYVLNGSKHWITNAPIADVLVVWAKLDGDVRGFV 234 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGP---VEDMKI 314 + R +P L +++ K R+ S T L D V GP + K Sbjct: 235 LER--SKLAPGMLETPKIEGKFSLRA--------SETGSIFLADARV--GPDAILPKAKG 282 Query: 315 L----IYLDSAIMSVSGMRVSLAEAIHYARRRHVS-----GGILIDQPVMKRAIADIALD 365 L L+SA ++ + AEA + RR+V G L ++++ +AD+A + Sbjct: 283 LGAPFSCLNSARFGIAWGALGAAEACYDVARRYVGERSQFGAPLAANQLIQKKLADMATE 342 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 +A + R+ D + + M + K C A V A + +GG+G Sbjct: 343 LALGYGAAQRVGELKDAGQINPQ-------MLSLVKRNSCGKALDVARAARDMLGGNGIQ 395 Query: 426 EERSIARH 433 +E + RH Sbjct: 396 DEYHVIRH 403 >gi|291416094|ref|XP_002724281.1| PREDICTED: glutaryl-Coenzyme A dehydrogenase [Oryctolagus cuniculus] Length = 442 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCF 256 GLTE G+D + ++ + S Y L+G K W +SP++D F++ A + G + F Sbjct: 181 FGLTEPNHGSDPGGMETRARYNPSSKSYTLNGTKSWITNSPVADLFVVWAPCDDGLIRGF 240 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 L+ R GL R++ K R++AT + G + + NV G Sbjct: 241 LIER-----GTRGLSAPRIQGKFSLRASATGMIVME---GVEVPEENVLPGATGLSAPFG 292 Query: 317 YLDSAIMSVSGMRVSLAE-AIHYARR----RHVSGGILIDQPVMKRAIADIALDIAAATA 371 L++A ++ + AE +H AR+ R G L ++++ +AD+ +I Sbjct: 293 CLNNARYGITWGVLGAAEFCLHTARQYTLDRLQFGAPLARNQLIQKKLADMLTEITLGLH 352 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 RL D+ K+ E M + K C A + +A + +GG+G +E + Sbjct: 353 SCLRLGRLKDQDKATPE-------MVSLLKRNNCGKALDIARQARDMLGGNGVCDEYHVI 405 Query: 432 RH 433 RH Sbjct: 406 RH 407 >gi|91975744|ref|YP_568403.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91682200|gb|ABE38502.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 404 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + ++ +K++DG Y LSG K W ++P++D F++ A+ + ++ Sbjct: 146 FGLTEPDAGSDPGGMKTKAEKVADG-YRLSGSKMWISNAPIADVFVVWAKSAAHDNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDM 312 F +LE G GL ++ K+ R++ T E+ LL +++ GP + Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMDGVVVPEEALLPNVSGLKGPFGCL 259 Query: 313 KILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 Y + +M + + A Y R L ++++ +AD+ +IA Sbjct: 260 NRARYGISWGVMGAA--EDCMQRARQYTLDRKQFNRPLAATQLVQKKLADMQTEIALGVQ 317 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE K E M I K C A + A + GG+G E + Sbjct: 318 ASLRVGRLMDEGKVAPE-------MISIVKRNNCGKALDIARVARDMHGGNGIQIEYHVM 370 Query: 432 RH 433 RH Sbjct: 371 RH 372 >gi|328886350|emb|CCA59589.1| Methylsuccinyl-CoA dehydrogenase, predicted by [Streptomyces venezuelae ATCC 10712] Length = 401 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 37/276 (13%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+ K D Y L+G K +L++ + + + EG + Sbjct: 135 GSDVSAITSKAVKDGD-EYVLNGQKMWLTNGGTSTLVAVLVRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 L + P GL +K+G + T EL L N G V Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTELIMDG----LRIPANRVLGGVTGRGFY 249 Query: 316 IYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +D ++V+ +A+ + YA++RH G + ++ +A++A + Sbjct: 250 QMMDGVEVGRVNVAARGCGVAQRAFELGVSYAQQRHTFGKAIAQHQAIQFKLAEMATKVE 309 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 AA A+ A D + EA A KY + V+ +A GG G+ +E Sbjct: 310 AAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDAFRIHGGYGFSKE 362 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 I R YRE+P +L+G G A + ++ LLE+ Sbjct: 363 YEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|328774443|gb|EGF84480.1| hypothetical protein BATDEDRAFT_15770 [Batrachochytrium dendrobatidis JAM81] Length = 535 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D+A + ++ +K +G Y ++G K ++++ + + +A G G Sbjct: 259 ICLCITEPSAGSDVANLMTEAKKTPNGEHYIVNGEKKWITNGVFADYFTVAVRTGGPGMN 318 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 V LL + S G+ + + G ++ T + F + L+G N + K Sbjct: 319 GVSLLLIEKSMPGVKTRHMPCS-GVWASGTTYITFEDVKVPVKNLIGKEN------KGFK 371 Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 ++Y + AI + RV + E+I YA +R G LID PV++ + + + Sbjct: 372 CIMYNFNHERMGIAIQATRFARVCVEESIKYAHKRKTFGKKLIDHPVIRNKLGHMVRKVE 431 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418 A A + + + K E+ ++ PI T +C + A + Sbjct: 432 ATHAW---MESLLYQTKCMPEDQQMLKLGGPIALLKVQSTQTMEFCAREAAQIFGGLSYS 488 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G + R YRE A +I GS M+ Sbjct: 489 RGGQG----EKVERLYREVRAYAIPGGSEEIMI 517 >gi|195326049|ref|XP_002029743.1| GM24928 [Drosophila sechellia] gi|194118686|gb|EDW40729.1| GM24928 [Drosophila sechellia] Length = 420 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 53/299 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ S E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 139 TPEQKEKYLPKLCSGEH-------------VGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278 L+G K W + +D I+ A+ G + F+V E G + +K Sbjct: 185 ILNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETAWE-----GFSVAQKLDK 239 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327 +G R ++T EL F DL V + E+ + + + A V Sbjct: 240 MGMRGSSTCELVFQ--------DLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGL 291 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 M+ + A YA +R ++ + +++ +AD+ ++A + + +A S D A +RS Sbjct: 292 MQAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCD-AGNRS 350 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ + + A V +A++ +GG+GYI E R R++ I G+ Sbjct: 351 PKDCAGVIL------YTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGT 403 >gi|257452716|ref|ZP_05618015.1| Acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R] gi|257466577|ref|ZP_05630888.1| Acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|315917732|ref|ZP_07913972.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|317059257|ref|ZP_07923742.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R] gi|313684933|gb|EFS21768.1| acyl-CoA dehydrogenase [Fusobacterium sp. 3_1_5R] gi|313691607|gb|EFS28442.1| acyl-CoA dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 381 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 37/291 (12%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI------Y 226 W F E P + IG GLTE GTD + GQ+ + + Sbjct: 96 WPILKFGTEAQKQKYLPKMASGEWIGAFGLTEPNAGTD-----ASGQQTTAVFDEEKQEW 150 Query: 227 CLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPR-LLEDGSPNGLCYQRLKNKIGNRSN 284 ++G K F+++ + +++ A + G + ++E G+P G + + K+G R + Sbjct: 151 IINGSKIFITNAGYAHVYVVFAMTDKSKGVKGISAFIIESGTP-GFSIGKKEKKLGIRGS 209 Query: 285 ATVELEFSNTF---GFLLGDLNVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLA-----EA 335 AT EL F + LLGDL + KI ++ LD + ++ + LA EA Sbjct: 210 ATCELIFEDVRIPKENLLGDLG------KGFKIAMMTLDGGRIGIASQALGLAQGALDEA 263 Query: 336 IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 + Y + R G L +A++ + + A+ L ++ A + + +AA A++ Sbjct: 264 VQYVKERKQFGRALSKFQNTAFQLANMEVKVEASRLLVYKAAWNESNHLPYTVDAARAKL 323 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A T A V +A++ GG GY E + R R++ I G+ Sbjct: 324 FAAET-------AMEVTTKAVQLFGGYGYTREYPVERMMRDAKITEIYEGT 367 >gi|189189650|ref|XP_001931164.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972770|gb|EDU40269.1| short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 443 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 32/181 (17%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGR--V 253 I + +TE G+D+A IT+ +K +DG Y ++G KW + SD M + G Sbjct: 157 ICIAITEPEAGSDVANITTTAEKTADGKHYIINGSKKWITNGIWSDYATMAVRTSGPGPT 216 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED-- 311 G +V L+ G P G+ +R+K GN S+ T +E L D+ V PVE+ Sbjct: 217 GLSMVVVPLK-GYP-GVSMRRIKVG-GNISSGTTFIE--------LDDVKV---PVENLV 262 Query: 312 ------MKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAI 359 MK ++ L AI + RV+L+ A+ Y +R G L+DQPV++ + Sbjct: 263 GEEGMGMKYIMTNFNHERLSIAIGATRQARVALSAAVEYVLKREAFGKPLVDQPVVRHRL 322 Query: 360 A 360 A Sbjct: 323 A 323 >gi|167840067|ref|ZP_02466751.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis MSMB43] Length = 393 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + D Y L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGD-RYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M L + Y R G + + +++ IAD+ A A Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D S I + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDAGGSAHVRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|121608553|ref|YP_996360.1| acyl-CoA dehydrogenase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553193|gb|ABM57342.1| acyl-CoA dehydrogenase domain protein [Verminephrobacter eiseniae EF01-2] Length = 412 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 31/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----------E 250 L+E G+D+A+I+ + + D + L+G+K W + +D + A+ E Sbjct: 127 LSEPDTGSDLASISCRAVREGD-EWVLTGNKYWCTFADGADYLSLFARTSAPASAGQRGE 185 Query: 251 GRVGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 G + CFL+ + E GS P G+ + KIG T EL + D + Sbjct: 186 G-ISCFLIEK--ERGSFPKGMTGAPIP-KIGYFGWKTFELALDGVR--VPADCLIGAQGK 239 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIAL 364 + + L+ A + + LA+ AI YA R G + + ++ IA +A Sbjct: 240 AFLLMAKGLEGARAHTAARAIGLAQGALEDAIAYAGERKQFGMPIAEYQAIRFKIATMAT 299 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 +I AA L + + D + EA+ A KY+ +MA V ++A++ GG+GY Sbjct: 300 EIEAARQLLYYVCGEIDRGRRCDREASMA-------KYFASEMAERVTSQALQIFGGAGY 352 Query: 425 IEERSIARHYRESPANSILLGS 446 + ++ R++R++ I G+ Sbjct: 353 TKLFAVERYWRDARLTKIFEGT 374 >gi|237817454|ref|ZP_04596446.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] gi|237788267|gb|EEP62483.1| acyl-CoA dehydrogenase [Brucella abortus str. 2308 A] Length = 381 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 184 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 238 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351 Query: 432 RHYRE 436 YR+ Sbjct: 352 HFYRD 356 >gi|242210493|ref|XP_002471089.1| predicted protein [Postia placenta Mad-698-R] gi|220729879|gb|EED83746.1| predicted protein [Postia placenta Mad-698-R] Length = 363 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 68/297 (22%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV----EGRVG-- 254 L+E G+D A+ ++ K D + L+G K W +S ++ F++ A V G G Sbjct: 94 LSEPASGSDAFALQTRAVKDGDH-WVLNGSKMWITNSYEAEVFLIFANVISVHNGYKGIT 152 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 CF+ + + G+ + + K+G R+++T + L DL V P E++ Sbjct: 153 CFIATKDM------GIQIAKKEQKLGIRASSTCLIS--------LDDLRV---PEENIIG 195 Query: 313 ----------KILIYLDSAI---------MSVSGMRVSLAE-----AIHYARRRHVSGGI 348 ++L+ D I + ++ + LA+ A+ Y +R G Sbjct: 196 KHVLRVCHTAQLLMLYDPQIAIECLNEGRIGIAAQMLGLAQGAFDKAVPYTYQRTQFG-- 253 Query: 349 LIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYW 403 QPV + A A++I AA L++ A +E K + EAA A++ A Sbjct: 254 ---QPVGTFQGLAFQQARAAMEIEAARLLTYNAARRKEEGKPFAREAAMAKLYAS----- 305 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++A V A+E GG G+ E I +++R+S +I G+ N + + L++K Sbjct: 306 --EVAQRVSGAAIEWAGGVGFTRETGIEKYWRDSKIGAIYEGTSNIQLQTIAKLIQK 360 >gi|33316727|gb|AAQ04622.1|AF443184_3 acyl CoA dehydrogenase [Paracoccidioides brasiliensis] Length = 415 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 43/278 (15%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D++ IT + + DG Y ++G K ++++ + + A G G Sbjct: 139 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 198 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM---- 312 + LL + S G+ +++ + G ++ T + F D+ V PVE++ Sbjct: 199 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFE--------DVKV---PVENLIGKE 246 Query: 313 ----KILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 K+++ + I V RV E++ YA +R G LID PV++ +A + Sbjct: 247 NQGFKVIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGKRLIDHPVIRMKLAHM 306 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIA 413 A I A+ L N + +S + A R+ I T +C + A + Sbjct: 307 ARQIEASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFG 363 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR A +I GS M+ Sbjct: 364 GLSYTRGGQG----EKIDRLYRNVRAYAIPAGSEKIML 397 >gi|328783450|ref|XP_393211.4| PREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like [Apis mellifera] Length = 414 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 32/273 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 LTE G+D ++ + +K DG Y +SG K W +S +++ F++ A G + Sbjct: 157 LTEPGSGSDAFSLKTIAKK--DGSDYVISGTKMWISNSDIAELFLVFANANPSAGYRGIT 214 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDM 312 + GL + ++K+G +++ T + F N G + G Sbjct: 215 TFFVERDTPGLTIAKPEDKLGIKASGTCMIHFDNVRVPEDNILGHFGHGYKYAAG----- 269 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ + + + +A+ I Y R G + M+ IA + ++ Sbjct: 270 ----FLNEGRIGIGAQMIGIAQGCLDATIPYTLERKQFGKDIFSFQSMQHQIAQVVTELE 325 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A L + A D K +EAA A+ +A T A V A+ ++ +GG G+ + Sbjct: 326 SARLLVYNAARLVDIKKDVMKEAAMAKFVASET-------ALRVTAKCIDFMGGVGFTTD 378 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 +++R+S +I G+ N + + + K Sbjct: 379 FPQEKYFRDSKIGTIYEGTSNMQLSTIAKCIRK 411 >gi|254487803|ref|ZP_05101008.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101] gi|214044672|gb|EEB85310.1| glutaryl-CoA dehydrogenase [Roseobacter sp. GAI101] Length = 407 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 29/245 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE---GRVGCF 256 GLTE G+D A + ++ K + G + W ++P++D F++ A+ E G++ F Sbjct: 149 FGLTEPDAGSDPAGMKTRAIKTATGYKLIGSKMWISNAPIADVFVVWAKSEEHGGKIRGF 208 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 ++ + ++ GL ++ NK+ R++ T E+ N LL + GP Sbjct: 209 ILEKGMK-----GLTAPKVGNKLSLRASITGEIVMDNVEVGEDALLPHVQGLKGP----- 258 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAA 368 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 259 -FGCLNRARYGISWGALGAAEFCWHASRQYGLDRKQFNKPLAQTQLFQKKLADMQTEIAL 317 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 S ++ D AK+ E M I K C A + + + GG+G E Sbjct: 318 GLQASLQVGRLMDAAKAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISGEY 370 Query: 429 SIARH 433 + RH Sbjct: 371 QVIRH 375 >gi|86156788|ref|YP_463573.1| butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773299|gb|ABC80136.1| Butyryl-CoA dehydrogenase [Anaeromyxobacter dehalogenans 2CP-C] Length = 591 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 31/267 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D + DG Y L G K F+++ ++ F + A+V+ + FLV Sbjct: 146 LTEPEAGSDAMGGKATATLSPDGKHYLLDGTKQFITNGSFANLFTVFAKVDRKHFTAFLV 205 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 R G+ + K+G + ++T + F + +LG+ + G +L Sbjct: 206 ERTF-----PGVTVGPEEKKLGIKGSSTTSVIFESAKVPVENVLGE--IGKGHKIAFNVL 258 Query: 316 ----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L +A+ + +++LA YA R G + ++ +AD A + A+ + Sbjct: 259 NVGRFKLGAAVTGAA--KLALATGAAYANARKQFGTPIARFGAIREKLADQAAGVYASES 316 Query: 372 LSFRLANSFDE--AKSRSEEAAYAR----------IMAPITKYWCCKMAPAVIAEAMECI 419 L +RLA D+ A +E+ Y I I K +C ++ V+ E ++ Sbjct: 317 LIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYAIECAIAKVFCSEVLADVVDEVVQIH 376 Query: 420 GGSGYIEERSIARHYRESPANSILLGS 446 GG G+I+E ++YR+ N I G+ Sbjct: 377 GGYGFIQEYPAEKYYRDERINRIFEGT 403 >gi|89100481|ref|ZP_01173343.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911] gi|89084824|gb|EAR63963.1| CoA dehydrogenase [Bacillus sp. NRRL B-14911] Length = 379 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 50/270 (18%) Query: 200 LGLTEKRGGTDIAAI-TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255 GLTE G+D TS +K DG + ++G K ++++ + + V G G Sbjct: 123 FGLTEPNAGSDAGGTRTSAAEK--DGEFIINGSKCYITNASYAKHLAITAVTGGSGADKE 180 Query: 256 ---FLVPRLLEDGSPNGLCYQRLKN--KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVE 310 +VP E ++ + N K+G L SNT ++ D+ V P E Sbjct: 181 ISAIIVPTDAEG-------FKVIDNYEKMG--------LNASNTTELVMEDVRV---PTE 222 Query: 311 DM---------KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMK 356 + + LI LD + + M V +A+A + YA+ R G L ++ Sbjct: 223 HLLGKKGEGFKQFLITLDGGRIGIGAMAVGIAQAAYEKALQYAKERTQFGRSLSQFQAIQ 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+A+ I A + ++ A D+ K ++EA+ + K + ++ V +A+ Sbjct: 283 FKLADMAMKIELARNMVYKAAWLKDQGKPFTKEAS-------MCKLYASEICMEVADQAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG GY+++ + R+ R+ I G+ Sbjct: 336 QIHGGYGYMKDYHVERYMRDGKLTEIGEGT 365 >gi|126652587|ref|ZP_01724751.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] gi|126590578|gb|EAZ84695.1| acyl-CoA dehydrogenase [Bacillus sp. B14905] Length = 378 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 34/260 (13%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVE-----GRVGC 255 LTE G+D ++ S+ + D Y ++G K F+++ +D +I+ A + + Sbjct: 124 LTEPGAGSDAGSLQSKAVRDGDE-YVINGSKVFITNGGEADVYIVFASTDPAEKTKGISA 182 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDM 312 F+V E G+P GL + ++K+G + TV+L F N LLG+ E Sbjct: 183 FIV----EKGTP-GLIIGKDEHKMGLHGSRTVQLTFDNCRIPADNLLGEEG------EGF 231 Query: 313 KI-LIYLDSAIMSVSGMRVSLAEAIHYA-----RRRHVSGGILIDQPVMKRAIADIALDI 366 KI + LD + ++ + +AEA A + R G ++ Q + +AD+A + Sbjct: 232 KIAMANLDVGRIGIAAQSLGIAEAALEAATAYAKERVQFGKPIVAQQGVSFKLADMATAV 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 ++ L +R AN + EA+ A++ A + A EA++ GG GY E Sbjct: 292 ESSKLLVYRAANLRAKGLPCGAEASMAKLFA-------SRTAVQTAIEAVQVFGGYGYTE 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R++R++ I G+ Sbjct: 345 DYPVERYFRDAKVTEIYEGT 364 >gi|187479839|ref|YP_787864.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N] gi|115424426|emb|CAJ50979.1| isovaleryl-CoA dehydrogenase [Bordetella avium 197N] Length = 392 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + + Sbjct: 128 LAMSEPGAGSDVVSMRLRAEKKGD-RYVLNGTKMWITNGPDADTLVVYAKTDPEAHQRGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKIL 315 L + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 187 TAFLIEKGFKGFSIAQKLDKLGMRGSHTGELVFQDCEVPAENILGQLN---GGVKVLMSG 243 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A++S + M+ + A+ Y R G + + +++ +AD+ + A+ A Sbjct: 244 LDYERAVLSGGPLGIMQAVMDVAVPYVHDRKQFGQAIGEFQLIQGKMADMYTTLQASRAF 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + + D + E R + + A + E ++ +GG+GYI E + R Sbjct: 304 CYTVGKNLD--RLGREHVRQVRKDCAALILYTAERATWMAGEGIQLLGGNGYINEYPVGR 361 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 362 LWRDAKLYEIGAGT 375 >gi|113867952|ref|YP_726441.1| isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16] gi|113526728|emb|CAJ93073.1| Isovaleryl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 393 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 22/285 (7%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 TP + PK+ S E+ IG L ++E G+D+ ++ + + D Sbjct: 109 TPAQKAKYLPKLVSGEW--------------IGALAMSEPNAGSDVVSMKLRAEFKGD-R 153 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K W + P D ++ A+ E +G + + + G + +K+G R + Sbjct: 154 YVLNGTKMWITNGPDCDVLVVYAKTEPELGARGMTAFIVEKGMKGFSVAQKLDKLGMRGS 213 Query: 285 ATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMS---VSGMRVSLAEAIHYARR 341 T EL F + + L V G + + + + A++S V M+ + Y Sbjct: 214 HTGELVFQDVEVPVENILGVENGGAKVLMSGLDYERAVLSGGPVGIMQACMDVVTPYIHD 273 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + + +++ +AD+ + AA + + + + D S A I Sbjct: 274 RKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYTVGKNLDALGSGHVRQVRKDCAAVI-- 331 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A + E ++ +GG+GYI E R +R++ I G+ Sbjct: 332 LYTAEKATWMAGETVQILGGNGYINEYPAGRLWRDAKLYEIGAGT 376 >gi|326328574|ref|ZP_08194914.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325953535|gb|EGD45535.1| acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 617 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 51/295 (17%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGRVGC- 255 LTE G+D+ A + DG + ++G K F++S SD ++LA+ +G G Sbjct: 164 LTEPDAGSDVGAGKTFATPNEDGSWNITGVKRFITSAESDLQENIMHLVLARPKGVEGVG 223 Query: 256 ---------FLVPRLLED-------GSPNGLCYQRLKNKIGNRSNATVELEFSN------ 293 FLVP+ D G NG +++K+G + + T EL F + Sbjct: 224 GPGTKGLSLFLVPKYHFDHETGELTGERNGAYVTNVEHKMGIKVSNTCELTFGDPQVGGG 283 Query: 294 --TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 G+LLG+++ + D+ + +++ + A+ YA+ R V G L Sbjct: 284 EPAKGWLLGEVHDGIRQMFDVIENARMMVGTKAIATLSTGYLNALEYAKTR-VQGADLTK 342 Query: 352 ------------QPVMKRAI---ADIALDIAA----ATALSFRLANSFDEAKSRSEEAAY 392 P ++R++ A + A T+ ++ + D + AA Sbjct: 343 AAKTDPRVTITHHPDVRRSLLVQKSFAEGMRALVYYTTSWQEKVVLTEDGSDENKLAAAV 402 Query: 393 ARIMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ PI K + + A ++ E+++ GGSG+++E I ++ R++ +SI G+ Sbjct: 403 NDLLLPIVKGYGSERAWTLLGTESLQTFGGSGFLQEYPIEQYVRDAKIDSIYEGT 457 >gi|284029016|ref|YP_003378947.1| acyl-CoA dehydrogenase domain-containing protein [Kribbella flavida DSM 17836] gi|283808309|gb|ADB30148.1| acyl-CoA dehydrogenase domain protein [Kribbella flavida DSM 17836] Length = 384 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 33/259 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR----VGCF 256 L+E + G+DI+A+T++ + D Y L+G K W +D + A+ + F Sbjct: 127 LSEPQAGSDISAMTTKAVRDGDE-YVLTGTKAWITHGSQADFYTTFARTSADAKHGISAF 185 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 VP S +GL + + K+G + T + + L+G + M+ Sbjct: 186 HVP-----ASTDGLSFGAPERKMGLTGSTTTLVNYDRVRVPAAHLIGAEG------DGMR 234 Query: 314 I-LIYLDSAIMSVSGMRVSLAEAIHYAR-----RRHVSGGILIDQPVMKRAIADIALDIA 367 I L LDS + ++ V LA+A R G + D ++ +AD+A + Sbjct: 235 IALSALDSGRLGIAACAVGLAQAALDCAAAYALERKQFGHAIADFQGLQFLLADMAAAVE 294 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 +A A + A D + +++AA A+++ C A V +A++ +GG GY + Sbjct: 295 SARATYLQAARRRDLGRPFTQQAAIAKLV-------CTDAAMKVTTDAVQVLGGYGYTRD 347 Query: 428 RSIARHYRESPANSILLGS 446 R+ RE+ I G+ Sbjct: 348 FPAERYMREAKVTQIFEGT 366 >gi|154344857|ref|XP_001568370.1| acyl-CoA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065707|emb|CAM43480.1| putative acyl-CoA dehydrogenase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 421 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 27/257 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----C 255 LTE G+D A+ ++ K + ++G K F+++ + ++++A V+ G C Sbjct: 153 LTEASSGSDAFALKTRATK-KGSKWIINGSKLFITNGGWAGIYLVMATVDSSKGYKGITC 211 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKIL 315 F+V + G+ R ++K+G R+++T EL F N + + NV + KI Sbjct: 212 FVV----DSSETPGVSVVRTEDKLGIRASSTAELRFENV---EVPEENVVGEVGKGYKIA 264 Query: 316 I-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 I L+ + + + +A+ + Y +R G + D M+ A+ A+++ AA Sbjct: 265 INILNEGRIGIGAQMLGIAQGSLDIVMPYLFQRKQFGKAIGDFQGMQMQYAECAMELHAA 324 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + + ++ ++AA A KY+ +A + A+E GG G++++ Sbjct: 325 RLMVYNACRKKQNNETFIQDAAMA-------KYFASVVAEKTASRAVEWAGGIGFMKDFG 377 Query: 430 IARHYRESPANSILLGS 446 + R YR++ +I G+ Sbjct: 378 LERFYRDAKIGAIYEGT 394 >gi|148553745|ref|YP_001261327.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148498935|gb|ABQ67189.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 394 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + ++ K ++G Y LSG+K W ++P++D F++ A+ +G++ Sbjct: 137 FGLTEPDAGSDPGGMRTRAVK-TEGGYRLSGNKTWISNAPIADVFVVWAKSDAHDGQIRG 195 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F +LE G+ GL +++ K+ R++ T + + LL ++ GP Sbjct: 196 F----VLEKGA-KGLSAPKIEGKLSLRASITGMINLDDVEVGEDALLPNVQGLKGP---- 246 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y R G L + ++ +AD+ DI+ Sbjct: 247 --FGCLNRARYGISWGALGAAEFCFHAARQYGLDRKQFGRPLAATQLYQKKLADMLTDIS 304 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S R+ DE + +A M I K A + +A + GG+G EE Sbjct: 305 LGLQASLRVGRLMDEGR-------FAPEMVSIVKRNNVGKALDIARQARDMHGGNGISEE 357 Query: 428 RSIARH 433 + RH Sbjct: 358 YQVIRH 363 >gi|62317913|ref|YP_223766.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|83269889|ref|YP_419180.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|189023163|ref|YP_001932904.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|254690603|ref|ZP_05153857.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254699201|ref|ZP_05161029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254732646|ref|ZP_05191224.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256255783|ref|ZP_05461319.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260545145|ref|ZP_05820966.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260756175|ref|ZP_05868523.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260760456|ref|ZP_05872804.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260763697|ref|ZP_05876029.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260881999|ref|ZP_05893613.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|297249154|ref|ZP_06932855.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|18092573|gb|AAL59348.1|AF454951_26 putative acyl-CoA dehydrogenase [Brucella abortus] gi|62198106|gb|AAX76405.1| acyl-CoA dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82940163|emb|CAJ13213.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-terminal [Brucella melitensis biovar Abortus 2308] gi|189021737|gb|ACD74458.1| acyl-CoA dehydrogenase [Brucella abortus S19] gi|260098416|gb|EEW82290.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260670774|gb|EEX57714.1| acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260674118|gb|EEX60939.1| acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260676283|gb|EEX63104.1| acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260871527|gb|EEX78596.1| acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|297173023|gb|EFH32387.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 380 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 237 VLNRGRLHISSVCAGTAERPIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350 Query: 432 RHYRE 436 YR+ Sbjct: 351 HFYRD 355 >gi|15966004|ref|NP_386357.1| putative acyl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] gi|307314889|ref|ZP_07594480.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|15075274|emb|CAC46830.1| Putative acyl-CoA dehydrogenase [Sinorhizobium meliloti 1021] gi|306898926|gb|EFN29574.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 386 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------- 251 L +TE G+D+ + + D + ++G K F+S F+++ G Sbjct: 122 LAMTEPDAGSDVRGMKCFARPDGDD-WIVNGTKHFISHADIADFVIVFIATGEEQTPRGP 180 Query: 252 --RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVST 306 ++ CFLV R G+P G + N + +R L F + +LG+++ Sbjct: 181 KKKITCFLVDR----GTP-GFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHKGF 235 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 D L A SV R + A+ YA R G + + +AD+ +I Sbjct: 236 DIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQGVSFKLADMITEI 295 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L+ A D+ + E A A++ A +M V EA++ GG G ++ Sbjct: 296 DAADLLTLSAAWRLDQGLPSNREIASAKVFA-------TEMLARVTDEAIQIYGGMGLMD 348 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 349 DLPLARFWRDARVERIWDGT 368 >gi|85703226|ref|ZP_01034330.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217] gi|85672154|gb|EAQ27011.1| isovaleryl-CoA dehydrogenase [Roseovarius sp. 217] Length = 387 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +K +D Y L+G K W + P +D ++ A+ G + Sbjct: 128 LAMSEAGAGSDVVSMKLRAEKRNDH-YKLNGSKYWITNGPDADTLVVYAKTNPDAGSKGI 186 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN-----VSTGPVE 310 L + + G +K+G R + T EL F + F +LG+ + +G Sbjct: 187 TAFLIEKTMKGFSTSPHFDKLGMRGSNTAELIFDDVDVPFENVLGEEGRGVRVLMSGLDY 246 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + + IM+ L E + Y R G + +M+ IAD+ + +A Sbjct: 247 ERVVLAGIGTGIMAAC-----LDEIMPYLAERKQFGQAIGSFQLMQGKIADMYTAMNSAR 301 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCC----KMAPAVIAEAMECIGGSGYIE 426 A + +A + D ++AA CC + A +A++ +GG+G++ Sbjct: 302 AYVYEVAKACDRGDVTRQDAAA-----------CCLYASEQAMVQAHQAVQAMGGAGFLA 350 Query: 427 ERSIARHYRESPANSILLGS 446 + +AR +R++ I G+ Sbjct: 351 DAPVARLFRDAKLMEIGAGT 370 >gi|324514843|gb|ADY46005.1| Isovaleryl-CoA dehydrogenase [Ascaris suum] Length = 415 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/256 (20%), Positives = 114/256 (44%), Gaps = 22/256 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + +KI D Y L+G K W + P +D I+ A+ + + Sbjct: 155 LAMSENGSGSDVVSMRLRAEKIGDQ-YVLNGTKFWITNGPDADVLIVYAKTNPAKNQYGI 213 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G +K+G R + T EL F+N + +LG+++ ++ Sbjct: 214 TAFIIEKDFEGFSASPKLDKMGMRGSNTSELVFNNCYVPEENVLGEIDKGV-----YVLM 268 Query: 316 IYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 LD + ++G + L + A YA R G + +++ +AD+ + A Sbjct: 269 TGLDVERLVLAGGPLGLMQAACDIAFDYAHHREAFGSKIGTFQLIQGKMADMYTTLNACR 328 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + + +A + D+ +++ A + + + A + +A++ +GG+GYI + Sbjct: 329 SYLYNVARATDDGYLTNKDCAGVIL-------YLAEHATKLCLDAIQILGGNGYINDYPT 381 Query: 431 ARHYRESPANSILLGS 446 R R++ I G+ Sbjct: 382 GRFLRDAKLYEIGAGT 397 >gi|296165498|ref|ZP_06848029.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899139|gb|EFG78614.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 384 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 34/264 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSSPMSDAFI-MLAQVEGRVGCFL 257 + LTE GG+D+ ++T+ +SDG + ++G K ++S+ I +L + + + Sbjct: 122 MALTEPGGGSDLQSMTT--TAVSDGDDFVVTGAKTWISNARRSGLIALLCKTDPKA---- 175 Query: 258 VPR------LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG-PVE 310 PR LL + P GL R K+G + + EL F G+ + + + G P + Sbjct: 176 TPRHTGISILLVEPGP-GLTISRDLPKLGYKGVESCELSFD---GYRVAESAILGGVPGK 231 Query: 311 DM-KILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 +++ L++ + V+ + +A +A+ Y+++R G + + +AD+A Sbjct: 232 GFSQMMKGLETGRIQVASRALGVATAALEDALAYSQQRESFGQPIWKHQAIGHYLADMAT 291 Query: 365 DIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA L+ A+ +D + EA A++ A T A + A+ GG GY Sbjct: 292 KLTAARQLTLYAADRYDSGERTDMEAGMAKLFASET-------AMEIALNAVRIHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGN 448 E + R++R++P +++G G Sbjct: 345 STEFDVERYFRDAPL--MIVGEGT 366 >gi|313231598|emb|CBY08712.1| unnamed protein product [Oikopleura dioica] Length = 413 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 35/282 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV-EGRV---- 253 LG++E G+D+A I + + D Y ++G K W + +D +LA +G V Sbjct: 149 LGVSEVHAGSDVAQIKTTAKSDGDD-YIINGQKMWITNGIQADWCCLLANTSDGPVHKSK 207 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 VP L G+ + KIG S+ T +L F + +++G+ +G + Sbjct: 208 SLICVPMDLP-----GVIRAKKIEKIGMWSSDTAQLWFEDVRVPKKYIIGE--EGSGFIY 260 Query: 311 DM-----KILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M + + + SAI SG+ + E I+Y R R G ++D + +A++ + Sbjct: 261 QMIQFQQERIFAMASAI---SGLENCINETINYTRERQAFGKSVLDNQYIHFQLAELQTE 317 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 + AL +R+ + + ++ +A + K ++ V + ++ GG GY Sbjct: 318 VELLRALLYRVTAMYVNGEDATK-------LASMGKLKTGRLIREVADKCLQMWGGMGYT 370 Query: 426 EERSIARHYRESPANSILLGSGNAM---VLDVLNLLEKGTNL 464 E +++ +R+ S+ G+ M + ++++L KGT L Sbjct: 371 LENPVSQQFRDGRLASVGGGADEIMLQIICKLMDILPKGTKL 412 >gi|307303547|ref|ZP_07583301.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] gi|307318602|ref|ZP_07598035.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306895629|gb|EFN26382.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti AK83] gi|306902938|gb|EFN33530.1| acyl-CoA dehydrogenase domain protein [Sinorhizobium meliloti BL225C] Length = 395 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE G+D A + ++ K G + W ++P++D F++ A+ E + Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316 +LE G+ GL ++ K+ R++ T E+ N G LL ++ GP Sbjct: 196 FVLEKGA-KGLSAPKIGGKLSLRASITGEIVLDNVEVGEEALLPNVEGLKGP------FG 248 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE + E M I K C A + A + GG+G EE + Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361 Query: 432 RH 433 RH Sbjct: 362 RH 363 >gi|282859245|ref|ZP_06268366.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282587978|gb|EFB93162.1| acyl-CoA dehydrogenase, C-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 568 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 24/290 (8%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHKWFLSSPMSDAFIMLAQVE-GRVG 254 + + LTE G+D+ + + + + L+G K F+++ SD ++LA+ E G Sbjct: 170 TMSMDLTEPDAGSDLQRVMLKASFDEKEKCWRLNGVKRFITNGDSDIHLVLARSEEGTKD 229 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 + + D G+ + +++K+G + T EL + N L G + G ++ + Sbjct: 230 GRGLSMFIYDKREGGVDVRHIEHKLGIHGSPTCELVYKNAKAELCG--STRMGLIKYVMA 287 Query: 315 LI---YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 L+ L A SV + + EA+ YA+ R G +I+ P + ++ + + A + Sbjct: 288 LMNGARLGIAAQSVGVSQEAYNEALAYAKDRAQFGKKIINMPPVYDMLSRMKAKLDAGRS 347 Query: 372 LSFRLANSFDEAKS--------------RSEEAAYARI---MAPITKYWCCKMAPAVIAE 414 L ++ A D K+ R E Y R+ PI K + + Sbjct: 348 LLYQTARYVDIYKALEDIARDEKLSPEERQEMKKYTRLADAFTPIAKGMNSEYVNQNAYD 407 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 + GGSG+I E R +R++ SI G+ V+ + + GT L Sbjct: 408 GISVHGGSGFIMEYKCQRLFRDARIFSIYEGTTQLQVVAAIRYITNGTYL 457 >gi|148554914|ref|YP_001262496.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148500104|gb|ABQ68358.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 390 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 35/271 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVE----GRV 253 + + ++E G+D+ A+ + ++ D Y ++G K F+S+ + I++A G Sbjct: 129 LAVAMSEPGAGSDLQAMKTSARREGDH-YVINGQKTFISNGAHASLIIVAAKTDPEAGAR 187 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 G L +E G RL +KIG T EL FS N G G + Sbjct: 188 GLSLFA--VETDEVEGFTRGRLLDKIGQEGRDTAELFFSDMRVPVENRIGPEGGGFAMLM 245 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 + +++I A +++ M ++ I Y R G ++D + +A+ Sbjct: 246 EKLPQERLVI----AWQALAMMEAAIDHTIAYTAERRAFGRAVLDFQNSQFKLAECKTQA 301 Query: 367 AAATAL-----SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 A LA + D A A + KYW + VI E ++ GG Sbjct: 302 TIARVFLDHCTQQLLAGTLDAAT------------ASMAKYWITEAQGKVIDECLQLFGG 349 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAMVL 452 GY+ E IA Y+++ I G+ M L Sbjct: 350 YGYMTEYPIAEMYKDARVFRIYGGTSEIMKL 380 >gi|315126581|ref|YP_004068584.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913] gi|315015095|gb|ADT68433.1| Acyl-CoA dehydrogenase protein [Pseudoalteromonas sp. SM9913] Length = 385 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 26/260 (10%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV----EGRVGCF 256 LTE G+D A++ ++ + D Y ++G K F+S + ++ +++A+ G + F Sbjct: 124 LTEPGSGSDAASLKTKAVRDGDE-YVINGSKMFISGAGETEILVVMARTGADGPGGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI 316 +VP +G+ Y + + K+G + T + F + + N+ E K + Sbjct: 183 VVP-----ADASGVEYGKAEEKMGWNAQPTRLISFEDV---RIPAANLLGQEGEGFKFAM 234 Query: 317 Y------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 ++ A S+ + +L A Y + R G L ++ IAD+ ++ AA Sbjct: 235 QGLDGGRINIATCSIGTAQAALNTAREYLKERTQFGKPLAAFQALQFKIADMNTELVAAR 294 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 + RLA +F + SE+ Y + K + + V +A++ GG GYI+E + Sbjct: 295 QM-VRLA-AFKLDTNDSEKTTYC----AMAKRFATDVGFTVCNDALQIHGGYGYIKEYPL 348 Query: 431 ARHYRESPANSILLGSGNAM 450 RH R+ + IL G+ M Sbjct: 349 ERHVRDVRVHQILEGTNEIM 368 >gi|16264595|ref|NP_437387.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] gi|15140733|emb|CAC49247.1| putative glutaryl-CoA dehydrogenase protein [Sinorhizobium meliloti 1021] Length = 395 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 23/242 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVP 259 GLTE G+D A + ++ K G + W ++P++D F++ A+ E + Sbjct: 137 FGLTEPDAGSDPAGMKTRAIKTEGGYRLVGSKMWISNAPLADVFVVWAKSEAHDNA-IRG 195 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-FG--FLLGDLNVSTGPVEDMKILI 316 +LE G+ GL ++ K+ R++ T E+ N G LL ++ GP Sbjct: 196 FVLEKGA-KGLSAPKIGGKLSLRASITGEIVLDNVEVGEEALLPNVEGLKGP------FG 248 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAIADIALDIAAATA 371 L+ A +S + AE +A R++ ++P + ++ +AD+ +IA Sbjct: 249 CLNRARYGISWGALGAAEFCWHAARQYGLDRKQFNRPLAQTQLFQKKLADMQTEIALGLQ 308 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 S R+ DE + E M I K C A + A + GG+G EE + Sbjct: 309 GSLRVGRLMDEGRMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGISEEYQVM 361 Query: 432 RH 433 RH Sbjct: 362 RH 363 >gi|311109069|ref|YP_003981922.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310763758|gb|ADP19207.1| acyl-CoA dehydrogenase, N-terminal domain protein 24 [Achromobacter xylosoxidans A8] Length = 389 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 23/264 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-----RV 253 LG++E G+D+A++ + +K D Y +SG K W ++ +D +LA Sbjct: 122 LGVSETGAGSDVASLKTTARKDGDD-YVISGSKMWITNATQADWMCLLANTSDDKPHRNK 180 Query: 254 GCFLVPRLLEDGSP-NGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309 +P E+G P G+ ++K K+G S+ T ++ F + +G+ + G Sbjct: 181 SLICLPLKQENGKPVPGVTMNKIK-KVGMWSSDTAQVFFDEVRVPQRYRIGEEGM--GFT 237 Query: 310 EDMKILI--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 M+ L A V+ + + + I Y R+R V G L+D + +A++ ++ Sbjct: 238 YQMRQFQEERLSGATRRVTALGDVINDTIDYTRQRLVFGKPLLDNQAVHFRLAELKTEVE 297 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A+ +R A + +E A+ A++ A ++ V ++ GG G+ E Sbjct: 298 MLRAMVYRAARVHMDGGDMTELASMAKLKAG-------RLCREVTDSCLQYWGGMGFTWE 350 Query: 428 RSIARHYRESPANSILLGSGNAMV 451 +++R +R+ SI G+ M+ Sbjct: 351 NAVSRAWRDLRLISIGGGADEIML 374 >gi|167573231|ref|ZP_02366105.1| isovaleryl-CoA dehydrogenase [Burkholderia oklahomensis C6786] Length = 398 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K + Y L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGE-RYVLNGTKMWITNGPDCDTLVVYAKTEPDAGARGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M L I Y R G + + +++ IAD+ A A Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVIPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIM----APITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + D + S A+ R + A + Y K A + EA++ +GG+GYI E Sbjct: 305 LYAVGRHLDAGGTASAGGAHVRQVRKDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEY 363 Query: 429 SIARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 364 PVGRLWRDAKLYEIGAGT 381 >gi|121610468|ref|YP_998275.1| butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2] gi|121555108|gb|ABM59257.1| Butyryl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2] Length = 386 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 35/301 (11%) Query: 161 MVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQK 220 M+ TP V W P + E + LTE G+D AA+T++ ++ Sbjct: 96 MLGRWATPAVRDHWGPLLTRGEKLAS-------------YCLTEPGAGSDAAALTTRAER 142 Query: 221 ISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIG 280 + Y ++G K F+S S ++L G G + G+ Y + + K+G Sbjct: 143 VGSD-YVINGSKAFISGAGSTDMLVLMARTGAAGAGGISAFAVPADTPGISYGKKERKLG 201 Query: 281 NRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKILIY-LDSAIMSVSGMRVSLAEAI 336 S T + LLG + E KI + LD ++++ V A+ Sbjct: 202 WNSQPTRSIGLEQLRIPAEHLLGRVG------EGFKIAMQGLDGGRINIASCSVGAAQGA 255 Query: 337 HYARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAA 391 A R+++ QP+ ++ +AD+A ++ AA + A+ D A Sbjct: 256 LQAARQYMQQRRQFGQPLASFQALQFKLADMATELVAARQMVRLAASKLDTG------AP 309 Query: 392 YARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A + K + + AV EA++ GG GYI E I R R++ + IL GS M Sbjct: 310 DASTYCAMAKRFATDIGFAVCNEALQLHGGYGYIREYPIERLLRDTRVHQILEGSNEIMR 369 Query: 452 L 452 L Sbjct: 370 L 370 >gi|327295096|ref|XP_003232243.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] gi|326465415|gb|EGD90868.1| acyl-CoA dehydrogenase [Trichophyton rubrum CBS 118892] Length = 435 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K S G Y L+G K W +S + FI+ A ++ G + Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + + G + + K+G R+++T L F + LLG+ + K I Sbjct: 235 FVVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288 Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + ++ LA A + R G ++ M+ +A +IAAA Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL F A + + ++AA A++ + ++A V A+E +GG G++ E Sbjct: 349 ALVFNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +R+S +I G+ N + + L+K Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431 >gi|295695810|ref|YP_003589048.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] gi|295411412|gb|ADG05904.1| acyl-CoA dehydrogenase domain protein [Bacillus tusciae DSM 2912] Length = 395 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 41/258 (15%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------RVGCFLVPR 260 G+D + + ++ DG + + GHKWF + AF ++ V R F+V Sbjct: 138 GSDPTLLRTTARRDGDG-WVIDGHKWFATGGSRAAFFIVMAVTDPDADPHRRASMFIV-- 194 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF------------GFLLGDLNVSTGP 308 E G+P GL R +G+ EL F N GF L L + G Sbjct: 195 --EAGTP-GLEIVRDVPVMGDTLGGHTELWFRNCRIPGENLLGEVGDGFRLAQLRLGPGR 251 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + A+ + MR S + Y +RR G L D ++ IA+ DI Sbjct: 252 IT---------HAMRWIGVMRRSFEMMLDYVQRRETRGQKLADFQTVQNDIAESYADIET 302 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + L+ A D+ AR + K++ VI A++ G G+ ++ Sbjct: 303 SRFLTLHAAWKMDQGLD-------ARKEISLIKFYGANALHRVIDRAIQVHGALGFSKDT 355 Query: 429 SIARHYRESPANSILLGS 446 + YRE+ A I G+ Sbjct: 356 PLEGFYREARAARIYDGA 373 >gi|89899798|ref|YP_522269.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gi|89344535|gb|ABD68738.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 382 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 40/270 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLA----QVEGRVGC 255 + +TE G+D+ I ++ + +G Y ++G K F+S+ +++ +G G Sbjct: 126 IAMTEPGTGSDLQGIRTRADRSGEG-YVINGAKTFVSNGFLAGLVLVVAKTDTSQGARGT 184 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF-------------GF--LLG 300 ++ ++E + G R+ +K+G ++ T EL F + GF L+G Sbjct: 185 SIL--IVETQNCPGYRVGRVLDKMGLKAQDTSELFFDDVHVASDQLLGGKEGSGFFQLMG 242 Query: 301 DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 DL P E M I + +++ M + + Y R R G + D K +A Sbjct: 243 DL-----PYERMVI------GVTALAAMEGAYQVTLDYVRGRKAFGQTIADFQNTKFRLA 291 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 +IA +I A R D R + A A + K W + V+ ++ G Sbjct: 292 EIATEIKVGRAFIDRCVE--DLVAGRLDTAT-----ASMAKLWGSEAQGRVVDICVQLFG 344 Query: 421 GSGYIEERSIARHYRESPANSILLGSGNAM 450 G GY+ E I+R Y ++ I G+ M Sbjct: 345 GYGYMNEYLISRMYTDARVQRIYGGTSEIM 374 >gi|85709279|ref|ZP_01040344.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1] gi|85687989|gb|EAQ27993.1| acyl-CoA dehydrogenase [Erythrobacter sp. NAP1] Length = 381 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 38/270 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVG-----CF 256 LTE G+D AA+ + ++ D Y L+G K F+S S+ + G G C Sbjct: 126 LTEPSSGSDAAALKTTAKRDGDH-YILNGTKQFISGAGSNEVYVAMVRTGEDGPKGITCM 184 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL-----NVSTGPVED 311 ++ + E G+ + + K+G S T +L +L D+ N+ G E Sbjct: 185 VIEKDFE-----GVSFGANEKKLGWHSQPTAQL--------ILEDVRVPVENLVGGEGEG 231 Query: 312 MKI-LIYLDSAIM-----SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 +I ++ LD + S+ G + L EA+ Y + R G + + + +AD+A D Sbjct: 232 FRIAMMGLDGGRLNIGACSLGGAQRCLDEAVRYTKERSQFGKPVAEFQNTQFTLADMATD 291 Query: 366 IAAATALSFRLANSFDE-AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY 424 + AA AL + A E A ++ +A A+ +A +V+ A++ GG GY Sbjct: 292 LEAARALLYLAAAKVTENAPDKTRFSAMAKRLA-------TDNGSSVVDRALQLHGGYGY 344 Query: 425 IEERSIARHYRESPANSILLGSGNAMVLDV 454 +++ I R +R+ +SIL G+ M + V Sbjct: 345 LQDYPIERFWRDLRVHSILEGTNQIMRMVV 374 >gi|328771128|gb|EGF81168.1| hypothetical protein BATDEDRAFT_36810 [Batrachochytrium dendrobatidis JAM81] Length = 428 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 30/262 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + K D Y L+G K F+S + S+ +++LA+ G + CF Sbjct: 161 LTEPNSGSDAASLLTTAVKKGDS-YILNGTKAFISGAGESEIYVILARTGGPGPKGISCF 219 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGPV 309 +V E G+P GL + + + K+G S+ T + + G L+G N++T + Sbjct: 220 VV----EKGTP-GLSFGKKERKVGWNSSPTRAVILEDCAIPVGNLIGQEGRGFNIATLAL 274 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 ++ I A + G + +L + Y R G L ++ +A++A + + Sbjct: 275 NIGRMNI----AACGLGGAQAALETTVEYVNDRKQFGKPLSANQSVQFKLAEMATQLTTS 330 Query: 370 TALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A D + S AA A+I A C ++A +A++ GG GY+++ Sbjct: 331 RLMIREAARQIDINSPSAPSWAAMAKIHATDN---CFELA----NDALQLHGGYGYLKDY 383 Query: 429 SIARHYRESPANSILLGSGNAM 450 + ++ R+ + IL G+ M Sbjct: 384 KVQQYMRDLRVHQILGGTNQIM 405 >gi|226228678|ref|YP_002762784.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] gi|226091869|dbj|BAH40314.1| acyl-CoA dehydrogenase [Gemmatimonas aurantiaca T-27] Length = 392 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 18/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D AA+ ++ + Y L G K W + ++D +++ A+ G + Sbjct: 131 FALSEPDSGSDAAALQCAARRDGED-YVLDGEKTWISNGGIADFYVVFARTGEAPGARGI 189 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313 + D GL + I A ++ S G ++ ++ + Sbjct: 190 SAFIVDADTAGLEIAERIDVIAPHPLARLQFTSCRVPASQRIGAAGEGFKLAMRTLDVFR 249 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + A ++ R +L EA+ R + GG+L D + + ++A++A I +A L+ Sbjct: 250 TSV----AAAALGFARRALDEALARVTTRRMFGGVLADLQLTQSSLAEMATTIDSAALLT 305 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +R A D+ + + EAA A KY + A VI A++ GG G + + + R Sbjct: 306 YRAAWQRDQGQPVTREAAMA-------KYVATEGAQRVIDAALQLWGGMGVVHDVPVERL 358 Query: 434 YRESPANSILLGSGNAMVL 452 YRE A I G+ L Sbjct: 359 YREIRALRIYEGASEVQQL 377 >gi|218295367|ref|ZP_03496180.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218243999|gb|EED10525.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 378 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----C 255 LTE G+D ++ ++ + D Y L G K F+S + +++ FI+ A+ + G Sbjct: 120 LTEPEAGSDAGSLKTRAYRDGD-FYVLEGQKTFISHANVAEVFIVFAKTDPDQGSKGISA 178 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI- 314 FLV R +G+ LK K+G R+ A + F + L G E KI Sbjct: 179 FLVER------QDGVRTTPLKGKLGLRA-ADTGMVFLDGVRIPRDRLLGQEG--EGFKIA 229 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L LD+ +S++ V L + ++ Y + R G + +++ +A++ LD+ A+ Sbjct: 230 LSTLDTGRISLAAGAVGLMQRALDLSLAYVKERRQFGRPIASFQLIQEKLAEMKLDLEAS 289 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+++ + + EA+ A++ A + A V A++ GG G+ EE Sbjct: 290 RLLTYQAVWKKLSGERYTLEASMAKLFA-------SEAANRVAYRAIQVHGGYGFFEEYE 342 Query: 430 IARHYRES 437 +AR YR++ Sbjct: 343 VARLYRDA 350 >gi|226958414|ref|NP_001152980.1| isovaleryl-CoA dehydrogenase, mitochondrial isoform 2 precursor [Homo sapiens] gi|119612820|gb|EAW92414.1| isovaleryl Coenzyme A dehydrogenase, isoform CRA_b [Homo sapiens] gi|193783817|dbj|BAG53799.1| unnamed protein product [Homo sapiens] Length = 396 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 120 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 164 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 165 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 221 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T EL F + +LG N + L L A + M+ L I Y Sbjct: 222 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 281 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 282 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 335 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V + ++C GG+GYI + + R R++ I G+ Sbjct: 336 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 379 >gi|332020079|gb|EGI60525.1| Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Acromyrmex echinatior] Length = 416 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 32/273 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E G+D ++ ++ +K DG+ Y ++G K W +S ++ FI+ A + G + Sbjct: 159 LSEPGSGSDAFSLKTEAKK--DGVEYVINGTKMWISNSDVAQIFIIFANADPAAGYRGIT 216 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL----NVSTGPVEDM 312 L D GL + ++K+G +++ T + F N LLG + G Sbjct: 217 AFLVDRDTPGLKVDKCEDKMGLKASGTCMVHFDNVRIPKDNLLGKFGHGYKYAAG----- 271 Query: 313 KILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +L+ + + + +A+ I Y R G + ++ IA ++ Sbjct: 272 ----FLNEGRIGIGAQMIGIAQGCLDATIPYTLERKQFGQEIFSFQSLQHQIAQAVTELE 327 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 A L + A + K +EAA A++ A T A + A+ ++ +GG G+ + Sbjct: 328 CARLLVYNAARLVEAKKDVVKEAAMAKLFASET-------ACRITAKCIDFMGGVGFTTD 380 Query: 428 RSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 ++YR+ +I G+ N + + + K Sbjct: 381 FPQEKYYRDVKIGTIYEGTSNMQLSTIAKCIRK 413 >gi|241766348|ref|ZP_04764234.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gi|241363513|gb|EER58968.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 446 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 +G+TE G+D+ AI + ++ D Y ++G K F+S+ D ++ A+ + G V Sbjct: 188 IGMTEPGAGSDLKAIRTTAKRDGD-HYVINGSKIFISNGQHCDLLVLAAKTDPAAGAKGV 246 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVEDMKIL 315 L D G + KIG + T EL F++ LLG + G V+ M+ L Sbjct: 247 SLFLVDTKAPGFTRGQNLEKIGQHAGDTSELFFNDLRVPADALLGGVE-GQGFVQMMREL 305 Query: 316 I--YLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 L + +V G + +L + Y + R G + + +A A DIAAA A Sbjct: 306 PRERLIIGVQAVHGAKGALDATVKYVQERQAFGQAVAQFQNTRFTLAQCASDIAAAEAFL 365 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 +++ + E + K ++ V ++ GG GY+ E I+R Sbjct: 366 TMSVAAYERGELTPEAVS-------ALKLHTTEVFGRVADACLQLFGGYGYMAEYPISRF 418 Query: 434 YRESPANSILLGSGNAM 450 + ++ I G+ M Sbjct: 419 WTDARVLRIYGGTSEIM 435 >gi|261203511|ref|XP_002628969.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239586754|gb|EEQ69397.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239608213|gb|EEQ85200.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3] gi|327349398|gb|EGE78255.1| acyl-CoA dehydrogenase [Ajellomyces dermatitidis ATCC 18188] Length = 440 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 98/399 (24%), Positives = 159/399 (39%), Gaps = 69/399 (17%) Query: 102 AWHALLRRSIHD--GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSA 159 AW L + IHD G+ WD + +YL +G P+ A Sbjct: 82 AW--LKKLGIHDILGVKVEDWDLLY-------------TGIYLDEMNRSGLSGPPTSLCA 126 Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ 219 M P V K +P++ R + P +++ +AI TE G+D+A IT+ Sbjct: 127 GMA--YGVPPVIKFGSPELHER-FLPELLTCKKRSCIAI----TEPDAGSDVANITTTAN 179 Query: 220 KISDGI-YCLSG-HKWFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKN 277 K +DG Y ++G KW ++ +D M + G L ++ + G+ +RL + Sbjct: 180 KTADGKHYIINGTKKWITNAIWADYTTMAVRTGGPGASGLSLVIVPLKNQPGVTMRRL-S 238 Query: 278 KIGNRSNATVELEFSNTFGFLLGDLNVSTGPVED--------MKILIY------LDSAIM 323 G + T +E L D+ V PVE+ MK ++ L + Sbjct: 239 VTGQAAGGTTFIE--------LDDVKV---PVENLVGEEGLGMKYIMTNFNHERLTIVVG 287 Query: 324 SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS----FRLAN- 378 V RV+L+ A Y +R G L+DQPV++ +A ++ + A + +++ N Sbjct: 288 VVRQARVALSAAFEYCLKRQAFGKTLMDQPVVRHRLAKAGAELESLWAWTEQFLYQVNNM 347 Query: 379 SFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437 S DE R A A+ A + C ++A + G G + ER YRE Sbjct: 348 SKDEGDFRLGGLTALAKAKAGMVLNECAQVAVLLFGGNGLTRTGQGEVAERI----YREV 403 Query: 438 PANSILLGSGNAMVLDVLNLLEKGTNLFEQLFSTLEQDL 476 P I GS + LL+ ++F EQ L Sbjct: 404 PGVRIPGGSEDV-------LLDLSVRQLVKVFKAQEQKL 435 >gi|294650137|ref|ZP_06727518.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] gi|292823987|gb|EFF82809.1| acyl-CoA dehydrogenase [Acinetobacter haemolyticus ATCC 19194] Length = 382 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 31/303 (10%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 S +A + + T + W PK+ S E A+G +G+TE G+D+ A Sbjct: 92 SEIAAPYIQHIGTEEQKQYWLPKMVSGE--------------AVGAIGMTEPGAGSDLQA 137 Query: 214 ITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCY 272 + + + D Y L+G K F+S+ +D ++ + + + V LL D +G Sbjct: 138 MRTSA-ILQDDHYLLNGSKTFISNGQHADVVVLAVKTDPQARAKGVSLLLVDTHLDGFKK 196 Query: 273 QRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVS--G 327 +KIG S T EL F N LLG N +G M+ L +AI S + Sbjct: 197 GTNLDKIGLHSQDTSELFFDNVKVPKDQLLG--NAGSGFAYLMQELPRERTAIASTALGA 254 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 +R ++ A Y + R G + + +A +D A A + + + K Sbjct: 255 IRGAIDLATTYVKERQAFGQAIAQFQNTRFVLAQAKIDELATAAFYNQNVELYMQGKLDV 314 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447 E AA K + M V ++ GG GY+ E I+R + ++ I G+ Sbjct: 315 ETAA-------ALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARIQRIYGGTN 367 Query: 448 NAM 450 M Sbjct: 368 EIM 370 >gi|292655353|ref|YP_003535250.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] gi|291371232|gb|ADE03459.1| acyl-CoA dehydrogenase [Haloferax volcanii DS2] Length = 380 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 25/263 (9%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 G LTE G+D + + + ++ DG Y + G K F+++ ++ + ++ A + G Sbjct: 122 GWALTEPGSGSDASDMDTVAERDGDG-YVIDGTKQFITNANVAGSVLVKAVTDPGAGYDG 180 Query: 258 VPRLLED-GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313 + + D + +G +K+G S+ T EL F + + LLG+ G + MK Sbjct: 181 ISTFIVDPENDDGFEVTTEWDKMGLNSSPTCELSFDDCWVPEDRLLGEEG--GGWKQTMK 238 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK-RAIADIALDIAAATA- 371 L D +S++ + V LAE + + + D+P+ K AI D + + T Sbjct: 239 TL---DGGRISIAALSVGLAEGAYGHAKSYAQEREQFDRPISKFDAIRDKLVSMHRKTER 295 Query: 372 ---LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 L+ + A +D K S E+A A++ A + A V +A++ +GG GY + Sbjct: 296 ARLLTHKAATRYDAGKRVSRESALAKLDA-------SEAAREVAEDAVQVLGGYGYTTDF 348 Query: 429 SIARHYRESPANSILLGSGNAMV 451 + R YR+ A + +G G + + Sbjct: 349 APQRFYRD--AKLMEIGEGTSEI 369 >gi|197120808|ref|YP_002132759.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] gi|196170657|gb|ACG71630.1| acyl-CoA dehydrogenase domain protein [Anaeromyxobacter sp. K] Length = 591 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 41/272 (15%) Query: 202 LTEKRGGTD------IAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGR-V 253 LTE G+D IA ++ G+ Y L G K F+++ ++ F + A+V+ + Sbjct: 146 LTEPEAGSDAMGGKAIATLSPDGKH-----YLLDGTKQFITNGSFANLFTVFAKVDRKHF 200 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVE 310 FLV R G+ + K+G + ++T + F + +LG+ + G Sbjct: 201 TAFLVERTF-----PGVTVGPEEKKLGIKGSSTTSVIFESAKVPVENVLGE--IGKGHKI 253 Query: 311 DMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 +L L +A+ + +++LA YA R G + ++ +AD A + Sbjct: 254 AFNVLNVGRFKLGAAVTGAA--KLALATGAAYANARKQFGTPIARFGAIREKLADQAAGV 311 Query: 367 AAATALSFRLANSFDE--AKSRSEEAAYAR----------IMAPITKYWCCKMAPAVIAE 414 A+ +L +RLA D+ A +E+ Y I I K +C ++ V+ E Sbjct: 312 YASESLIYRLAGLIDDRLATIPAEQPGYYEAYQQGIEEYAIECAIAKVFCSEVLADVVDE 371 Query: 415 AMECIGGSGYIEERSIARHYRESPANSILLGS 446 ++ GG G+I+E ++YR+ N I G+ Sbjct: 372 VVQIHGGYGFIQEYPAEKYYRDERINRIFEGT 403 >gi|134103462|ref|YP_001109123.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291005996|ref|ZP_06563969.1| butyryl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133916085|emb|CAM06198.1| acyl-CoA dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 383 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 40/302 (13%) Query: 179 FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS 236 F E P T A+G GLTE GG+D A ++ + DG + ++G K F++ Sbjct: 102 FGSEEQKRTWLPKLATGEALGAFGLTEPGGGSDAGA--TRTTAVLDGDEWVINGSKAFIT 159 Query: 237 SPMSD--AFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATV 287 + +D +F+ + V G + +VP G+P G + +K+G ++ T Sbjct: 160 NSGTDITSFVTVTAVTGHKPDGGKEISTIIVP----SGTP-GFTVAKKYSKVGWNASDTH 214 Query: 288 ELEFSN---TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYA 339 EL F + LLG+ + L L ++++ + V LA E + YA Sbjct: 215 ELSFDDCRVPAANLLGERGRGY-----AQFLSILTEGRVAIAALGVGLAQGCVDECLRYA 269 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPI 399 R G + + ++ IAD +++ A TA RLA + +A +R R A I Sbjct: 270 GEREAFGHKIGEYQAIQFKIAD--MEMRAHTA---RLA--YYDAAARMLRGEPYRKQAAI 322 Query: 400 TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 K A +A + GG G++ E +AR YR+ A + +G G + V +L E Sbjct: 323 AKLVSSNAAMDNARDATQIFGGYGFMNETPVARFYRD--AKILEIGEGTSEVQRMLIARE 380 Query: 460 KG 461 G Sbjct: 381 LG 382 >gi|260905176|ref|ZP_05913498.1| acyl-CoA dehydrogenase [Brevibacterium linens BL2] Length = 388 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 27/267 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGR-----V 253 L TE G+D A+IT++ + + DG Y L+G K W ++ +++ +++ A+ + V Sbjct: 128 LATTEPGSGSDSASITTRAEAV-DGGYLLNGQKAWISNAGLAEGYVVFAKTDPAQRSRGV 186 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 FL+PR E G+ + K+G R+ E+ FS+ F L + Sbjct: 187 TAFLLPRETE-----GMEFGAPMKKMGQRAIVCREIFFSDVFVPTHNRLGEEGRGFYGLM 241 Query: 314 ILIYLDSAIMSVSGMRVSLAE---AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + ++ + + + A A YAR R G +I+ + +AD+A I AA Sbjct: 242 RTFDISRVVLGAAALGTARAAYEYARDYARERTQFGKAIIEHQSVAFRLADMAARIDAAW 301 Query: 371 ALSFRLANSFD-----EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A D E + + AA A++ A T +C ++ +GG GY Sbjct: 302 LQVLNAARMIDAGDGVEREKVTASAAMAKLGASETAMFCTWA-------GVQTLGGWGYS 354 Query: 426 EERSIARHYRESPANSILLGSGNAMVL 452 E + + R++ I G+ + M L Sbjct: 355 REHPVEQWMRDAKLEEIEEGTSDIMRL 381 >gi|302527301|ref|ZP_07279643.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] gi|302436196|gb|EFL08012.1| cyclohexanecarboxyl-CoA dehydrogenase [Streptomyces sp. AA4] Length = 395 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 24/246 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR------VG 254 LTE G++ A + ++ + D + L G K F++ +P++D F++ A+ + Sbjct: 132 LTEPGAGSNPAGLRTKAVRDGDD-WVLDGQKRFITNAPIADLFVVFARTRPADDSGPGIA 190 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF--GFLLGDLNVSTGPVEDM 312 FLVP GL K+G T ++ F+N G L N G M Sbjct: 191 VFLVP-----ADTPGLEVGPKDKKMGQEGAWTADVTFNNVRVPGSALVGGNEDDGYRAAM 245 Query: 313 KILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L + A ++V + +L E++ YA G + D +++ +AD + A Sbjct: 246 TSLARGRVHIAALAVGSAQRALDESVAYAASATQGGQPIGDFQLVQAMLADQQTGVMAGR 305 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL A + + R RI K +C +MA V A++ GG+GY+ + + Sbjct: 306 ALVRETAARYVSGEDR-------RIGPSAAKLYCTEMAGKVADLAVQIHGGTGYMRDVPV 358 Query: 431 ARHYRE 436 R YR+ Sbjct: 359 ERIYRD 364 >gi|218291116|ref|ZP_03495131.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218238927|gb|EED06135.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 397 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 30/270 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + GLTE G+D+AA+ + + D Y L+G K W + ++D F++ A Sbjct: 113 PQARGEKIGAFGLTEPNAGSDVAAMRTTAVRDGDS-YILNGSKIWISLADVADHFLVFAY 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+V R E G + +K K+G R+ T EL F N G Sbjct: 172 TDRSKKHHGITAFIVERGWE-----GFSTRSIKGKLGIRAGNTGELFFDHVRVPVENRLG 226 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +++ + + + + + S + Y R G + +++ Sbjct: 227 EEGEGFKIAMSALDNGRFTVAAGACGCIAACLEAS----VKYCHERETFGQPIGKHQLVQ 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + IA +A ++ + L +R ++ + E + A+ +A C A ++A+ Sbjct: 283 QMIAKMAANLDISRLLVYRAGWLKNQGLPNTRETSLAKWVA-------CDAAWEAASDAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + G GY E + R+ R + A I G+ Sbjct: 336 QIHGAYGYSNEYPVERYLRNAKAPVIYEGT 365 >gi|94967495|ref|YP_589543.1| acyl-CoA dehydrogenase-like [Candidatus Koribacter versatilis Ellin345] gi|94549545|gb|ABF39469.1| acyl-CoA dehydrogenase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 560 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 44/303 (14%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI- 225 TP K W +I + + G TE G+D+ A+ + ++ D Sbjct: 104 TPEQKKHWLGRIGNE-------------GILFAYGATEPDAGSDLGALRTTADRVMDAER 150 Query: 226 ---YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGN 281 Y + G K W + ++DA+ +LA F+V E G+P G + + +NK G Sbjct: 151 VVGYRIDGLKQWISNGGIADAYTILANTPAGPSWFVV----EKGAP-GFTHDKPENKHGI 205 Query: 282 RSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSVSGMRVSLAEAI 336 R++ T L N + L+G + G ++ + Y L A + +L AI Sbjct: 206 RTSNTAALALQNVYVNADRLIGGVE-GQGLLQAQAVFGYTRLMVAAFGLGSGWAALDRAI 264 Query: 337 HYARRRHVSGGILID-QPVMKRAIADIALDIAAATALSFRLANSFDEAK-SRSEEAAYAR 394 Y+ +R G L + Q + I A + A+ A A D+ + S + E A A+ Sbjct: 265 PYSTKRIQGGAPLSEKQGYTHKLIVPNAARLEASRAFIEETAERIDKGEGSLNTEGAIAK 324 Query: 395 IMAPI---TKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 MA T CC ++ +GG GY E I + R+ +I G+ M Sbjct: 325 YMATEAGNTTAECC----------IQALGGYGYTHEYMIEKIKRDVRITTIYEGTSEIME 374 Query: 452 LDV 454 + + Sbjct: 375 MTI 377 >gi|330971272|gb|EGH71338.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 332 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R P KA P + +G L ++E Sbjct: 19 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGSPAQKARYLPRLISGEHVGALAMSEP 78 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 79 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 137 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 138 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGVLDGGVRV---------LMSG 188 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ +AD+ + A+ A Sbjct: 189 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAY 248 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + EA++ +GG+GYI E R Sbjct: 249 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALEAIQILGGNGYINEFPAGR 301 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 302 LLRDAKLYEIGAGT 315 >gi|258650576|ref|YP_003199732.1| acyl-CoA dehydrogenase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258553801|gb|ACV76743.1| acyl-CoA dehydrogenase domain protein [Nakamurella multipartita DSM 44233] Length = 381 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 34/338 (10%) Query: 117 CSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAP 176 I D + ++ +QAH++ A L L+A + VT TP W P Sbjct: 63 AGISDFRYNMILMEQAHRLGVAPAVLGPALQADICLPYFVTG--------TPEQRARWLP 114 Query: 177 KIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 I A T+VA +TE G+D++ I ++ + D Y L G K F++ Sbjct: 115 GIV---------AGTSITAVA----MTEPGTGSDLSGIATKAVRDGDH-YVLDGSKTFIT 160 Query: 237 SPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT- 294 + + +D I+ + G L ++E G+P G R K+G + T EL F+ Sbjct: 161 NGINADLVIVAVRTGGHAHRGLSLIVVERGTP-GFERGRKLAKVGLHAQDTAELSFAGAR 219 Query: 295 --FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQ 352 LLG + L A+ +V+ +L I + R R G + Sbjct: 220 VPAANLLGGEGSGFTQLTANLTQERLSVAVGAVAAAATALDRTIDHVRTRTAFGAPIGAL 279 Query: 353 PVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 ++ IA++A +I A R ++ +AA A K+W +M V+ Sbjct: 280 QHIRFQIAELATEIDIAQQYVDRCVTEHNQGVLGPVDAAKA-------KWWTTEMQWRVL 332 Query: 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 ++ GG GY+ E IAR + ++ I G+ M Sbjct: 333 DACVQLHGGMGYMTEHPIARAWADARVQRIYAGTTEIM 370 >gi|170725395|ref|YP_001759421.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810742|gb|ACA85326.1| acyl-CoA dehydrogenase domain protein [Shewanella woodyi ATCC 51908] Length = 391 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 29/254 (11%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLA 247 P T +G GLTE G+D + ++ ++I DG Y L+G K W +SP++D FI+ A Sbjct: 125 PKLATGEWVGCFGLTEPDVGSDPGGMKTRAERI-DGGYRLNGAKMWITNSPIADVFIVWA 183 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNV 304 ++EG++ F++ + ++ GL +++ K R++ T E+ N L+ + Sbjct: 184 KLEGKIRGFILEKGMK-----GLSAPKIEGKFSLRASVTGEIVMDNVEVPESALMPNAEG 238 Query: 305 STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP-----VMKRAI 359 GP L+ A ++ + AE + R++ + ++P ++++ + Sbjct: 239 LQGP------FGCLNKARYGIAWGALGAAEFCWHGARQYTLDRVQFNRPLAANQLIQKKL 292 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 AD+ +I + D +EA ++ I + C K A + + + Sbjct: 293 ADMQTEITTGLFACLQAGRLMD------QEALPVEAISLIKRNSCGK-ALDIARMSRDMH 345 Query: 420 GGSGYIEERSIARH 433 GG+G +E I RH Sbjct: 346 GGNGISDEFHIIRH 359 >gi|94499472|ref|ZP_01306009.1| fadE13 [Oceanobacter sp. RED65] gi|94428226|gb|EAT13199.1| fadE13 [Oceanobacter sp. RED65] Length = 383 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 27/266 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKIS-DG--IYCLSGHKWFLSSPMSDAFIMLA---QVEGRV 253 L +TE GG+D+A I ++ +K+ DG Y ++G K F++S F +A +G Sbjct: 124 LAITEPSGGSDVANIKTRAEKVEVDGKAFYKVNGSKTFITSGERADFYTVAVRTGGDGYG 183 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVE 310 G L+ L+E G+P G R K+ ++ T EL F + L+G N TG Sbjct: 184 GVSLI--LIEKGTP-GFSVGRNLKKMCWWASDTAELFFEDCLVPAENLIGAEN--TGFFA 238 Query: 311 DMKILIYLDSAIMSVSGMRVSLA--EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 M + S++ M LA + + Y++ R G + V K + ++A + Sbjct: 239 IMTNFQSERLMLTSMANMTAELALDQVMQYSKEREAFGRPIGKYQVTKHKLVEMATKLEV 298 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + + +++A + +E + A+ A T + + +A++ +GG G + E Sbjct: 299 SKTMMYQVAAQMHRGVDQVKEVSMAKNFATDTSDY-------ITHQAVQIMGGMGLMREC 351 Query: 429 SIARHYRESPANSIL-LGSGNAMVLD 453 + R YR+ N IL +G G +++ Sbjct: 352 VVERLYRD---NRILSIGGGTREIMN 374 >gi|255654848|ref|ZP_05400257.1| putative acyl-CoA dehydrogenase [Clostridium difficile QCD-23m63] gi|296449591|ref|ZP_06891368.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] gi|296878086|ref|ZP_06902101.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] gi|296261655|gb|EFH08473.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP08] gi|296430839|gb|EFH16671.1| butyryl-CoA dehydrogenase [Clostridium difficile NAP07] Length = 380 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 33/294 (11%) Query: 170 VHKDWAPKI--FSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISD-GI 225 +H +A I F E PM +G LTE G+D A + + Sbjct: 89 IHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTAIIDEETDE 148 Query: 226 YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G K F+S +++ I+ A + G + ++ D G +++ K+G + Sbjct: 149 YVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGS 208 Query: 285 ATVELEF-------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE--- 334 T EL F SN G N++ + LD A + V V +AE Sbjct: 209 ETAELIFDNCRVPKSNLLGKEGKGFNIA---------MTCLDGARIGVGAQAVGIAEGAL 259 Query: 335 --AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 +I Y++ R G + ++ IAD+A + +A L + A+ + ++EAA Sbjct: 260 EESIKYSKERVQFGKPISALQGIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAM 319 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A KY A V A++ GG GY+++ + R YR++ I G+ Sbjct: 320 A-------KYNASHTAREVTNLALQIHGGYGYMKDYPLERMYRDAKITEIYEGT 366 >gi|254487928|ref|ZP_05101133.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101] gi|214044797|gb|EEB85435.1| acyl coenzyme A dehydrogenase [Roseobacter sp. GAI101] Length = 383 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 47/310 (15%) Query: 160 SMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQG 218 S+ +L+ TP ++ + ++ +R P + AIG + +TE G+D+AAI ++ Sbjct: 91 SLHSLIVTPYINNRGSDELKARIL------PRMVSGDAIGAVAMTEPGTGSDLAAIKTRA 144 Query: 219 QKISDGIYCLSGHKWFLSSPMSDAFIMLAQV----EGRVGC--FLVPRLLEDGSPNGLCY 272 ++ +G + ++G K F+++ + ++ A V +G G F++ R + G Sbjct: 145 ERHGNG-WKINGQKTFITNGQNADVVVTACVTDPSKGAKGVSLFVIEREMA-----GFSR 198 Query: 273 QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS----TGPVEDMKILIYLDSAIMSV 325 R KIG N T EL F + F LLG+ N + ++LI + + Sbjct: 199 GRNLRKIGQHGNDTAELFFEDVFVPGENLLGEENKGFYYLMEELAQERLLISVQCQARAE 258 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA-----LSFRLANSF 380 + ++ + Y R G ++D + +A + ++ A A ++ RLA Sbjct: 259 AAFEMT----VDYVNERKAFGKKILDFQNTRFVLAGLKAELMAGRAFCDALIALRLAGKL 314 Query: 381 DEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPAN 440 D + A K + ++ V+ + ++ GG GY+EE IA+ + ++ Sbjct: 315 DA------------VQASAGKLYHSELLGRVVDQCLQLFGGYGYMEEYPIAQAFVDARIE 362 Query: 441 SILLGSGNAM 450 I G+ M Sbjct: 363 RIYAGTSEIM 372 >gi|158319223|ref|YP_001511730.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139422|gb|ABW17734.1| acyl-CoA dehydrogenase domain protein [Alkaliphilus oremlandii OhILAs] Length = 378 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 30/260 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVG--- 254 LTE G+D A ++ I DG Y L+G K F+S+ + ++ A + G Sbjct: 122 FALTEPNAGSDAGA--AKTTAILDGDEYVLNGTKCFISNGGQAQHLLIFALTDPSKGLKG 179 Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 C LV E G+P G ++++K+G + TVEL F N + N+ + Sbjct: 180 LSCILV----EKGTP-GFTIGKIEDKMGINGSETVELIFDNC---RVPKENLIGKEGKGF 231 Query: 313 KILI-YLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDI 366 I + LDSA + V + +AE+ + Y + R G L + I+D+A Sbjct: 232 MIAMNALDSARIGVGAQALGIAESALEESVKYMKERVQFGKPLTALQGLTWYISDMATKT 291 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L + A+ ++ ++EAA A++ A T A V A++ GG GY++ Sbjct: 292 EAAKWLVYHAAHLKATGENHTKEAAMAKLNAAET-------ARHVTNLALQIHGGYGYMK 344 Query: 427 ERSIARHYRESPANSILLGS 446 + + R YR++ I G+ Sbjct: 345 DYPLERMYRDAKITEIYEGT 364 >gi|82617161|emb|CAI64068.1| acyl-CoA dehydrogenase [uncultured archaeon] gi|268323006|emb|CBH36594.1| probable acyl-CoA dehydrogenase [uncultured archaeon] Length = 428 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 123/255 (48%), Gaps = 20/255 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE-GRVGCFL 257 LTE G+D A+ + D Y L+G K +++ + ++D +I+ A + G+ + Sbjct: 172 FALTEPSAGSDPTAMGTNAVHEGDE-YLLNGRKAYITNTSVADIYIVFAYTDKGKKRAGM 230 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI- 316 ++E G+ G + + + +G RS L+F++ + + N+ + KI + Sbjct: 231 SAFIVEKGT-KGFSFAGINDMLGMRSCIVGGLKFNDC---RVPEENLLGSEGDGFKIAMG 286 Query: 317 YLDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 LD +++S + V + +A YA+ R S + + ++ +AD+A+++ AA Sbjct: 287 TLDRDRIAMSSVGVGITQACLDISKKYAKERRQSSQPIANFQAVQFMLADMAVEVEAARL 346 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 L+++ A+ D+ + ++ A I K + ++A A++ GG G +E Sbjct: 347 LTYKAAHLADKGEKITK-------YASIAKLYASEVAQRAATNAVQIHGGYGCTKECPAE 399 Query: 432 RHYRESPANSILLGS 446 R+YR++ SI +G+ Sbjct: 400 RYYRDAKILSIAVGT 414 >gi|78047085|ref|YP_363260.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035515|emb|CAJ23161.1| glutaryl-CoA dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 391 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GL+E +GG+D AA+T++ + DG + L+G K W + ++ I+ A + V FLV Sbjct: 137 FGLSEAQGGSDPAAMTTRAVREGDG-WRLNGAKLWITNGSIAGLAIIWAHTDDGVRGFLV 195 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 G + +K+ R++ T L N F L + G + L Sbjct: 196 KT-----DSAGFSAHDISHKMSLRASVTSGLFLDNVFVPEQMRLPRAAGLKAPLSCLNQA 250 Query: 319 DSAIM--SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 I ++ L EA+ YA R + G L + +AD+A IA A L+ +L Sbjct: 251 RYGIAWGAIGAAMACLREALAYAGERILFGRPLAATQSAQIKLADMARRIATAQLLALQL 310 Query: 377 ANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 D + E+ + A K+ C+MA V E + +G +G E RH Sbjct: 311 GRLKDAGTLQPEQISLA-------KWNNCRMALDVARECRDLLGAAGITTEHVAIRH 360 >gi|84495430|ref|ZP_00994549.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] gi|84384923|gb|EAQ00803.1| putative acyl-CoA dehydrogenase [Janibacter sp. HTCC2649] Length = 625 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 65/341 (19%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQVEGR---- 252 LTE G+D+ A ++ + DG + ++G K F++S SD +LA+ EG Sbjct: 164 LTEPDAGSDVGAGRTKATQNEDGTWDITGVKRFITSAESDMVDNVVHFVLARPEGAGPGT 223 Query: 253 --VGCFLVPRLLED------GSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGD 301 + F++ + D G NG+ ++ K+G + + T EL F G LLGD Sbjct: 224 KGLSLFILTKYAVDLETGELGERNGVYVTNVEKKMGLKVSTTCELTFGGEKAATGTLLGD 283 Query: 302 LNVSTGP----VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP---- 353 ++ +E+ ++L+ +++ + A+ YA+ R V G L Q Sbjct: 284 VHDGIAQMFRVIENARMLV----GTKAIATLSTGYLNALEYAKER-VQGADLTQQTDKAA 338 Query: 354 ---------------VMKRAIADIALDIAAATALSFRLANSFD--------EAKSRSEEA 390 ++++A A+ + TA + +S E S +E+A Sbjct: 339 PRVTITHHPDVRRSLMLQKAYAEGLRALVLYTAAQQDIVDSAQLESGAETLEHGSPAEQA 398 Query: 391 AYAR-IMAPITKYWCCKMAPAVIA-EAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++ PI K + A ++ E+++ GGSG++++ + ++ R++ +++ G+ Sbjct: 399 NRVNDLLLPIVKGLGSERAWVLLGTESLQTFGGSGFLQDYPVEQYVRDAKIDTLYEGTTA 458 Query: 449 AMVLD------VLNLLEKGTNLFEQLFSTLEQDLGSSGKKV 483 LD + + + T L Q+ +DLG G K+ Sbjct: 459 IQGLDFFFRKIIKDKAQALTTLAMQI-QEFAKDLGGHGGKL 498 >gi|103488487|ref|YP_618048.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gi|98978564|gb|ABF54715.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 387 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 41/278 (14%) Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-S 237 F E + P + GLTE G+D AA+ ++ +G Y L+G K +++ + Sbjct: 103 FGTEQQKAHWLPKLASGSIAAFGLTEPDSGSDSAAMKTRAVPSGNG-YVLNGTKRYITNA 161 Query: 238 PMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELE 290 P +D +++A+ V FLVPR G+ + K+G + ++ Sbjct: 162 PFADVILVMARTNAEALPKNAHVSAFLVPR-----DAPGVSIGKPDGKMGQAGSQIADV- 215 Query: 291 FSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEA------------IHY 338 +L D++V + + I +A+ S+ R+S+A A + Y Sbjct: 216 -------ILEDVHVDGDALLGGEEGIGFRAAMQSLDNGRLSVAAASVGYAKRMLDTGLRY 268 Query: 339 ARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAP 398 A R G + +++ +AD +I AA + ++A +R++ + A Sbjct: 269 AMERKAFGEPIASFQLIQAMLADSKAEIYAADCM-------LNDACARADRGEKILVEAA 321 Query: 399 ITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 TK + +M V ++ GG+GY++E R YR+ Sbjct: 322 ATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRD 359 >gi|328545114|ref|YP_004305223.1| acyl-CoA dehydrogenase domain protein [polymorphum gilvum SL003B-26A1] gi|326414856|gb|ADZ71919.1| Acyl-CoA dehydrogenase domain protein [Polymorphum gilvum SL003B-26A1] Length = 384 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 31/264 (11%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA-----QVE 250 A G LTE G+D A + ++ + D Y L+G K +++S + F++ A + Sbjct: 122 AGGFCLTETGAGSDPAGMKTRAVRDGD-HYVLNGAKLYITSAEYAGIFVVWAVTDPDAAK 180 Query: 251 GR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLN--- 303 G+ + CFLV E G+P GL + + K+G +AT E+ F + L+G N Sbjct: 181 GKGISCFLV----ETGTP-GLVIGKAETKMGQTGSATNEVLFQDCRVPATALMGPENAGF 235 Query: 304 -VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADI 362 V+ G + +I I A +S+ R ++ A YA+ R G L D ++ IAD Sbjct: 236 KVAVGELAGGRIGI----AALSLGIARAAMEAAKAYAKERRQFGTALADMQGLQWMIADR 291 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 ++ AA L + A D+ +S ++EA+ A++ + + A A++ GG+ Sbjct: 292 ETELEAARLLVLQAAWLKDQGRSFAKEASMAKL-------YASEAAQRATYTALQIHGGA 344 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GYI + + R R++ +I G+ Sbjct: 345 GYIRDYPLERFARDARITTIYEGT 368 >gi|156741868|ref|YP_001431997.1| acyl-CoA dehydrogenase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156233196|gb|ABU57979.1| acyl-CoA dehydrogenase domain protein [Roseiflexus castenholzii DSM 13941] Length = 364 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 34/301 (11%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGT 209 +LM+P++ + ++ T + K W P++ + P A L E R Sbjct: 89 YLMTPNLFAIPILHYGTEEQKEK-WLPRLVEGGFAPYTAA------------LIEPRWSF 135 Query: 210 DIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPN 268 D A+ + ++ +Y ++GHK + + + AF++ A+ F++ R E Sbjct: 136 DPHALHTVAER-EGHVYEITGHKALVPLAADAHAFLVYAREGETTQAFIIERGTE----- 189 Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFG----FLLGDLNVSTGPVEDMKILIYLDSAIMS 324 GL ++ +G R+ T EL + + GD + ++ + + A ++ Sbjct: 190 GLAVLERESFMGIRALPTYELRLDDVHVPASCRVGGDQGID---IDHLMNYSRVALAALA 246 Query: 325 VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAK 384 V R + A YA++R G + + +A++A+++ AA +++ A D+ + Sbjct: 247 VGVARGAFEYARDYAKQREAFGKPIAQNQAIAFMLAEMAIEVEAARLMTYEAAWHLDKGR 306 Query: 385 SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILL 444 ++AA A K + +MA V A++ +GG GYI E + R R S L Sbjct: 307 HAVQQAALA-------KAYADEMALMVTDRAVQILGGHGYIREHPVERWLRNGRGFSTFL 359 Query: 445 G 445 G Sbjct: 360 G 360 >gi|307946508|ref|ZP_07661843.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4] gi|307770172|gb|EFO29398.1| acyl-CoA dehydrogenase [Roseibium sp. TrichSKD4] Length = 386 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 32/263 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--------- 249 L +TE G+D+ + Q + G + +SG K F+S + +D FI+ Sbjct: 122 LAITEPDAGSDVRGMKCQAVR-DGGDWVISGSKHFISGAEHADFFIVFIATGVDETPRGP 180 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + R+ CFLV R G+P G + N + ++ L F +LG+++ Sbjct: 181 KKRITCFLVDR----GTP-GFEVRDGYNSVSHKGYKNYILYFDKCRLPDAQVLGEVD--- 232 Query: 307 GPVEDMKILIY---LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 G + M +Y L A MSV R A++YA R G + + IAD+ Sbjct: 233 GGFQVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGEAIARFQGVSFQIADMI 292 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I AA L+ A D+ + E A A++ A +M V ++ GG G Sbjct: 293 TEIDAADWLTLAGAWRLDQGLPANREIASAKLYA-------TEMLANVTDTTLQIFGGMG 345 Query: 424 YIEERSIARHYRESPANSILLGS 446 +++ I R +R++ I G+ Sbjct: 346 LMDDFPIERFWRDARVERIWDGT 368 >gi|302499832|ref|XP_003011911.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371] gi|291175465|gb|EFE31271.1| hypothetical protein ARB_01893 [Arthroderma benhamiae CBS 112371] Length = 372 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 19/267 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K S G Y L+G K W +S + FI+ A ++ G + Sbjct: 113 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 171 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILI-YLD 319 + + G + + K+G R+++T L F + + N+ + K I L+ Sbjct: 172 FVVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDV---EVPKENLLGEEGQGYKYAISLLN 228 Query: 320 SAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + ++ LA A + R G ++ M+ +A +IAAA AL Sbjct: 229 EGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAARALV 288 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 F A + + ++AA A++ + ++A V A+E +GG G++ E + Sbjct: 289 FNAARKKEAGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIAEKM 341 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEK 460 +R+S +I G+ N + + L+K Sbjct: 342 FRDSKIGAIYEGTSNIQLQTIAKSLQK 368 >gi|254700278|ref|ZP_05162106.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|261750771|ref|ZP_05994480.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] gi|261740524|gb|EEY28450.1| acyl-CoA dehydrogenase [Brucella suis bv. 5 str. 513] Length = 380 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKHIAEHQMIQAMLADMSTEAYAGRC 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350 Query: 432 RHYRE 436 YR+ Sbjct: 351 HFYRD 355 >gi|331014342|gb|EGH94398.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 387 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGALDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ IAD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + +A++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|296168927|ref|ZP_06850596.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896396|gb|EFG76049.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 389 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 17/252 (6%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVP 259 L+E+ G+D A++ ++ + +DG + L+G K W + S + ++A + G + Sbjct: 134 LSEREAGSDAASMRTRAK--ADGEDWILNGAKCWITNGGKSSWYTVMAVTDPDKGANGIS 191 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLD 319 + G + K+G + + T EL F N + GD + L LD Sbjct: 192 SFMVHKDDEGFTVGPKEKKLGIKGSPTTELYFENCR--IPGDRIIGEPGTGFKTALATLD 249 Query: 320 SAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 ++ V +A+ AI Y + R G + D ++ +AD+A+ + +A + + Sbjct: 250 HTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGRPVSDNQGVQFMLADMAMKLESARLMVY 309 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A A++ E I A +K W +A V +A++ GG GY ++ + R Sbjct: 310 HAA-----ARAERGETNLGFISA-ASKCWASDVAMEVTTDAVQLFGGYGYTQDFPVERMM 363 Query: 435 RESPANSILLGS 446 R++ I G+ Sbjct: 364 RDAKITQIYEGT 375 >gi|255078674|ref|XP_002502917.1| predicted protein [Micromonas sp. RCC299] gi|226518183|gb|ACO64175.1| predicted protein [Micromonas sp. RCC299] Length = 434 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 29/276 (10%) Query: 193 KTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVE 250 + I L +TE G+D+A I +K + G Y + G K W + +D F + + Sbjct: 153 RGEATICLCITEPYAGSDVANIRCTAKKSNCGNFYVVDGEKKWITNGVWADYFTVAVRTG 212 Query: 251 GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 G + L+E P C R + +G ++ T + F N G L+G N Sbjct: 213 GSGMGGISLLLIEKTMPGVQC--RRMDCMGVWASGTSFITFENVKVPVGNLIGAEN---- 266 Query: 308 PVEDMKILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIAD 361 K +++ + + RV EA YA RR G L++ PV++ +AD Sbjct: 267 --NGFKYIMHNFNHERWGFVVQANRFARVCYEEAFKYAHRRRTFGKRLVEHPVIRAKLAD 324 Query: 362 IALDIAAA----TALSFRLANSFDE--AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEA 415 + I A +++++ E AK+ + A A++ + +C + A + A Sbjct: 325 MVRQIDATHHQMENITYQMCTMPKEQSAKALAGITALAKVQSTKVFEYCAREAAQIFGGA 384 Query: 416 MECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G + R YR+ A +I GS M+ Sbjct: 385 SYVRGGQG----EKVERLYRDVRAYAIPGGSEEIMM 416 >gi|153007382|ref|YP_001368597.1| acyl-CoA dehydrogenase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151559270|gb|ABS12768.1| acyl-CoA dehydrogenase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 387 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/315 (20%), Positives = 135/315 (42%), Gaps = 51/315 (16%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGI 225 +P + PK+ S E+ +G L ++E G+D+ ++ +K D Sbjct: 108 SPEQRAKYLPKLISGEH--------------VGALAMSEPGAGSDVVSMKLAAEKRGD-R 152 Query: 226 YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 Y L+G+K W + P +D ++ A+ + G + + + G + +K+G R + Sbjct: 153 YVLNGNKMWITNGPDADVLVVYAKTDPSAGPRGISAFIVEKGFKGFSTAQKLDKLGMRGS 212 Query: 285 ATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIH 337 T EL F N G + +NV ++ ++++ A + M L + Sbjct: 213 NTCELVFEDCEVPAENLLGEVGKGVNVLMSGLDYERVVL----AGGPLGIMAACLDVVVP 268 Query: 338 YARRRHVSGGILIDQPV-----MKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 Y R DQP+ M+ +AD+ + A+ A ++ +A + D ++ ++AA Sbjct: 269 YVHERK-----QFDQPIGEFQLMQGKLADMYVTFNASRAYTYAVAAACDRGETSRKDAAG 323 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVL 452 + + + A + +A++ +GG+GYI + R R++ I G+G + + Sbjct: 324 CIL-------YTAENATQMALQAIQSLGGNGYINDYPTGRLLRDAKLYEI--GAGTSEIR 374 Query: 453 DVLNLLEKGTNLFEQ 467 +L G LF++ Sbjct: 375 RML----IGRELFQE 385 >gi|149914858|ref|ZP_01903387.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b] gi|149811046|gb|EDM70883.1| acyl-CoA dehydrogenase domain protein [Roseobacter sp. AzwK-3b] Length = 407 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D A + ++ +K + G Y L+G K W ++P++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPAGMKTRAEKTATG-YRLTGSKMWISNAPIADVFVVWAKSEAHDGKIKG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-I 314 F++ D GL ++ K R++ T E+ G +G+ + VE +K Sbjct: 208 FIL-----DKGAKGLSAPKITGKQSLRASVTGEIVMD---GVEVGE-DALLPNVEGLKGP 258 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 L+ A ++ + AE A Y RH L + ++ +AD+ ++ Sbjct: 259 FGCLNRARYGIAWGVMGSAEFCWHAARQYGLDRHQFRRPLAQTQLFQKKLADMQTEVTLG 318 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 + R+ DEA + E M + K C A + A + GG+G EE Sbjct: 319 LQAALRVGRLMDEASAAPE-------MISLIKRNNCGKALDIARMARDMHGGNGISEEYQ 371 Query: 430 IARH 433 + RH Sbjct: 372 VIRH 375 >gi|293602002|ref|ZP_06684458.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292819625|gb|EFF78650.1| butyryl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 388 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 40/256 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVE------GR 252 LTE + G+D A+ + + D Y L+G K F++ +P++ F ++A+ + Sbjct: 122 FALTEPQAGSDATALRTTAVRDGDS-YVLNGEKCFITNAPLAGLFTVMARTDPDAPGAKG 180 Query: 253 VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM 312 + F+V R GL + +K+G + + F N V V Sbjct: 181 ISAFIVER-----DTPGLSTGQPYDKMGQAGSPVSAVYFDNC--------RVPAANVIGG 227 Query: 313 KILIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIA 360 + + +A+ ++ R+ LA + + + R G L++ +++ +A Sbjct: 228 QEGMGFKTAMKVLNKQRIHLAALCIGPAIRMLDDTLRFVAERQQFGKPLMEFQLIQAMLA 287 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D DI AA AL + A D + + + A I KY+ +M V ++ G Sbjct: 288 DCQTDIQAALALVLQTARERDAGQDVT-------MNASICKYFASEMCGRVADRCVQMHG 340 Query: 421 GSGYIEERSIARHYRE 436 G GYI ++ I R YR+ Sbjct: 341 GYGYIADQGIERFYRD 356 >gi|148252258|ref|YP_001236843.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gi|146404431|gb|ABQ32937.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 389 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 22/272 (8%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQ 248 AP + LG++E G+D+A+I + + D G W + +D +LA Sbjct: 112 APAVSGDAVVCLGVSETGAGSDVASIKTTARSDGDDYVINGGKMWTTNGTQADWMCLLAN 171 Query: 249 V-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLN 303 +G V +VP G+ R +K+G S+ T ++ F N + Sbjct: 172 TGDGPVHRNKSLIIVPM-----KTKGVQIARKLDKLGMHSSDTAQIFFDNVRVPKRNRVG 226 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVS----LAEAIHYARRRHVSGGILIDQPVMKRAI 359 G ++L + + + + S +A+ I Y R R V G ++D V+ + Sbjct: 227 -EEGQGFTYQMLQFQEERLWGAAACLKSHEYIIAKTIEYTRERKVFGRSVLDNQVVHFKL 285 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A++ ++ AL +R A + + + A A++ A ++ + ++ Sbjct: 286 AEMQTEVELLRALIYRAAEALIAGEDVTRLATMAKLKAG-------RLGRELTDACLQYW 338 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G++ E ++R YR++ SI G+ M+ Sbjct: 339 GGMGFMNETPVSRAYRDARLTSIGGGADEVML 370 >gi|332843535|ref|XP_001143270.2| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial isoform 7 [Pan troglodytes] Length = 396 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%) Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230 + + PK+ S EY IG L ++E G+D+ ++ + +K + Y L+G Sbjct: 120 EKYLPKLISGEY--------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNG 164 Query: 231 HK-WFLSSPMSDAFIM-----LAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 +K W + P +D I+ LA V G + ++E G P G + +K+G R + Sbjct: 165 NKFWITNGPDADVLIVYAKTDLAAVPASRG--ITAFIVEKGMP-GFSTSKKLDKLGMRGS 221 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341 T EL F + +LG N + L L A + M+ L I Y Sbjct: 222 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 281 Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401 R G + +M+ +AD+ + A + +A + DE +++ A + Sbjct: 282 REAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVIL------ 335 Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + + A V + ++C GG+GYI + + R R++ I G+ Sbjct: 336 -YSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGT 379 >gi|330820634|ref|YP_004349496.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3] gi|327372629|gb|AEA63984.1| Acyl-CoA dehydrogenase [Burkholderia gladioli BSR3] Length = 393 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 17/256 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K G Y L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADK-RGGHYVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGM 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNV-STGPVE 310 + + G + +K+G R + T EL F N G + G + V +G Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENVLGEVGGGVKVLMSGLDY 247 Query: 311 DMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 + +L + IM+ L + Y R G + + +++ +AD+ + A Sbjct: 248 ERAVLAGGPTGIMAAC-----LDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTNFQACR 302 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 A + + D A S I + + A + EA++ +GG+GYI E + Sbjct: 303 AYLYAVGRHLDAAGSGHVRQVRKDCAGVI--LYTAERATWMAGEAIQILGGNGYINEYPV 360 Query: 431 ARHYRESPANSILLGS 446 R +R++ I G+ Sbjct: 361 GRLWRDAKLYEIGAGT 376 >gi|288555393|ref|YP_003427328.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] gi|288546553|gb|ADC50436.1| short-chain-specific acyl-CoA dehydrogenase [Bacillus pseudofirmus OF4] Length = 381 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 22/249 (8%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLAQVEGRVGC 255 I TE G+ Q + DG + +SG K F + +P+ D FI+ A +E G Sbjct: 120 INAAATEPDTGSPTRGGKPQTTAVKDGTEWVISGKKTFTTMAPVLDYFIVTASLEDEEGV 179 Query: 256 --FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDL-NVSTGPV 309 FL+PR SP G+ N +G R+ + +L N FL+ L N P Sbjct: 180 ANFLIPR----ESP-GIIIDETWNTVGMRATGSHDLLLKNVRVPNRFLVERLSNKEKTP- 233 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSG--GILIDQPVMKRAIADIALDIA 367 M L+++ + + ++ + E+I++A+ + G + + P +++ I + + Sbjct: 234 --MGWLLHIPACYLGIA--EAAQRESINFAKTYSPNSISGTISELPNVQQRIGENEAKLM 289 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 + + +A +D S EE ++ + K A V+ +AM G SG + Sbjct: 290 QSRHFLYSVAKKWD--SSSQEERSFMKPELAAVKMMVVNSANDVVDQAMRVAGASGLFHD 347 Query: 428 RSIARHYRE 436 + R+YR+ Sbjct: 348 NPLQRYYRD 356 >gi|91976676|ref|YP_569335.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] gi|91683132|gb|ABE39434.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 384 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%) Query: 165 MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG 224 M TP + K + RE+ AP + +G++E G+D+AAI + + D Sbjct: 93 MATPALAK-FGSDALRREF----LAPAIAGDMVACIGVSEPGAGSDVAAIKTTARSDGDD 147 Query: 225 IYCLSGHKWFLSSPMSDAFIMLAQV-EGRV----GCFLVPRLLEDGSPNGLCYQRLKNKI 279 G W + +D +L +G + VP + G+ R +K+ Sbjct: 148 YVITGGKMWITNGTQADWICLLCNTGDGPIHRNKSLICVPM-----NSKGVTIARKLDKM 202 Query: 280 GNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 G S+ T ++ F N G L + V+ + ++ +A + ++ Sbjct: 203 GMHSSDTAQIHFDEVRVPKRNRIGEE--GLGFTYQMVQFQEERLWGAAACLKAH--EGTI 258 Query: 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAY 392 E I Y R R G L+D V+ +A++ ++ AL +R A + + ++ A Sbjct: 259 QETIEYTRNRKAFGKPLLDNQVIHFRLAELQTEVELLRALVYRAAEALVAGQDVTQLATM 318 Query: 393 ARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A++ A ++ + ++ GG G++ E ++R YR+S SI G+ M+ Sbjct: 319 AKLRAG-------RLGRELPDACLQFWGGMGFMNETLVSRSYRDSRLTSIGGGADEVML 370 >gi|134292212|ref|YP_001115948.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4] gi|134135369|gb|ABO56483.1| isovaleryl-CoA dehydrogenase [Burkholderia vietnamiensis G4] Length = 393 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKHGD-RYVLNGTKMWITNGPDCDTLVVYAKTDVDAGSRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A++S M L + Y R G + + +++ +AD+ A A Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S I + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGSDHLRQVRKDCAGVI--LYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|218295460|ref|ZP_03496273.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] gi|218244092|gb|EED10618.1| acyl-CoA dehydrogenase domain protein [Thermus aquaticus Y51MC23] Length = 577 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 40/269 (14%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLV 258 LTE G+D A ++ DG Y L+G K W ++ + F + A+V+G FLV Sbjct: 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAQLFTVFAKVDGEHFTAFLV 207 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 R GL + + K+G ++++T ++ +L D+ V PVE++ I Sbjct: 208 ER-----DTPGLSFGPEEKKMGIKASSTRQV--------ILEDVKV---PVENVLGEIGK 251 Query: 319 DSAIM--------------SVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIAL 364 I +V G + +L + YA +R G + +++ + ++A Sbjct: 252 GHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAAQRVQFGRPIGRFGLIQEKLGEMAS 311 Query: 365 DIAAATALSFRLANSFDEAKSRSE--EAAYARIM-----APITKYWCCKMAPAVIAEAME 417 I AA + +R DEA E EA A I A I K ++ V+ E ++ Sbjct: 312 RIYAAESAVYRTVGLIDEALLGKEGAEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371 Query: 418 CIGGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E I R YR++ N I G+ Sbjct: 372 IHGGYGYSQEYPIERAYRDARINRIFEGT 400 >gi|167615724|ref|ZP_02384359.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis Bt4] Length = 393 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-RFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M L + Y R G + + +++ IAD+ A A Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S +AR + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGS--AHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|206564273|ref|YP_002235036.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] gi|198040313|emb|CAR56298.1| putative acyl-CoA dehydrogenase [Burkholderia cenocepacia J2315] Length = 393 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A++S M L + Y R G + + +++ +AD+ A A Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S R A + Y K A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGSDHIRQV-RRDCAGVILYTAEK-ATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|149183811|ref|ZP_01862210.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1] gi|148848478|gb|EDL62729.1| acetyl-CoA dehydrogenase [Bacillus sp. SG-1] Length = 594 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 150/368 (40%), Gaps = 67/368 (18%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTD-IA 212 S+T + V + + P V +F E P T I LTE G+D + Sbjct: 109 SITHGAHVGIGSLPIV-------LFGDEDQKQKYLPALATGEKIAAYALTEPGSGSDALG 161 Query: 213 AITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDGSPNGL 270 A T+ + Y L+G K W ++ +D F++ A+++G + F+V R G+ Sbjct: 162 ARTTAKLNEAGTHYVLNGEKQWITNAGFADVFVVYAKIDGEQFSAFIVER-----EYPGV 216 Query: 271 CYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-------KILIY------ 317 + K+G +S++T L +L D V PVE++ I+ + Sbjct: 217 STGAEEKKMGIKSSSTRTL--------ILEDAQV---PVENLLGEAGKGHIIAFNILNIG 265 Query: 318 -LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRL 376 + +V G + ++ I YA +R + + K A +A + A + +R Sbjct: 266 RYKLGVGAVGGSKRAMDVTIKYANQRQQFKTPISSFNLTKEKFATMAAKLYATESSVYRT 325 Query: 377 ANSFDEAKSR-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 F++ S+ +EE A YA I + K + + ++ E ++ GG G Sbjct: 326 VGLFEDRMSKLTEEEVKNGTEVAKSIAEYA-IECSLNKVFATETLDYIVDEGVQIHGGYG 384 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFST 471 +++E I R YR+S N I G+ L V L L +K L E+L Sbjct: 385 FMQEYEIERMYRDSRINRIFEGTNEINRLLVPGTFVRKALKGELPLFQKAQALQEELMML 444 Query: 472 LEQDLGSS 479 + +++G + Sbjct: 445 MPEEVGDA 452 >gi|148554758|ref|YP_001262340.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148499948|gb|ABQ68202.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length = 387 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 34/276 (12%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-------RV 253 G++E G D+A++ + G+ D + ++G K F S ++I G + Sbjct: 126 GISEPDVGADVASVRTTGRVEGDRL-IVNGSKRFCSGATIASYIYTLVRTGPREDRHRNL 184 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVST 306 L+P +G+ ++ ++ +G + T ++ F+ N G G N T Sbjct: 185 TLVLIP-----SDADGITFE-AQDALGLKGTGTYDVTFADVSVPLANVVGEEAGFNNAWT 238 Query: 307 ---GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 GP D++ ++ A M++ ++ EA YA+ R G + ++ +A+ Sbjct: 239 MLVGPGLDIE---KMEVAAMALGIASAAVEEAWAYAQERVQFGKPISAFQSVRHMLAEAR 295 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + A A++++ A++ D A+ S E + A K + C+ A ++ + +G G Sbjct: 296 TKLHACRAVTYQAADALDRAEDASLETSMA-------KLFVCQTAQEIVLACQQVLGAYG 348 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVLNLLE 459 YI+E + RH R+ IL GS ++ N+L+ Sbjct: 349 YIKEFDMERHVRDILVMPILGGSSAIQKNNICNMLK 384 >gi|88802197|ref|ZP_01117724.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P] gi|88781055|gb|EAR12233.1| acyl-CoA dehydrogenase [Polaribacter irgensii 23-P] Length = 380 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 30/258 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D + + + D Y L+G K W S +D ++++AQ + G + Sbjct: 125 LSEPEAGSDATSQATTAEDKGDH-YLLNGTKNWITSGGRADVYLVMAQTDREKGHKGINA 183 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVSTGP 308 + + G ++K+G R + T L+F++ FGF +S G Sbjct: 184 FIVEKGAEGFHVGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGADGFGFTFAMKTLSGG- 242 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +I I + ++ G + A+ Y++ R G + + + +AD+ +I A Sbjct: 243 ----RIGIAAQALGIAAGGYEL----ALKYSKERKAFGTEICNHQAIAFKLADMYTEIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L + A D + +A A++ + K+A EA++ GG+G++++ Sbjct: 295 ARMLVMKAAWDKDNGHNYDMSSAMAKL-------YASKVAMEQTIEAVQIHGGNGFVKDY 347 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 348 HVERLMRDAKITQIYEGT 365 >gi|254707856|ref|ZP_05169684.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261315345|ref|ZP_05954542.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261304371|gb|EEY07868.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] Length = 571 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|225629546|ref|ZP_03787579.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] gi|225616042|gb|EEH13091.1| acyl-CoA dehydrogenase [Brucella ceti str. Cudo] Length = 381 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 125 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 183 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 184 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 237 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 238 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 297 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 298 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 351 Query: 432 RHYRE 436 YR+ Sbjct: 352 HFYRD 356 >gi|115733016|ref|XP_782503.2| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain [Strongylocentrotus purpuratus] gi|115950405|ref|XP_001189622.1| PREDICTED: similar to Acyl-Coenzyme A dehydrogenase, long chain [Strongylocentrotus purpuratus] Length = 443 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 39/280 (13%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLA 247 P +G L +TE G+D+ I + +K D Y L+G K F+++ +SD +++A Sbjct: 172 PAMTAGTKVGALAMTEPAAGSDLQGIKTSAKKDGDD-YILNGSKVFITNGCLSDVVVVVA 230 Query: 248 QVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGF 297 + + FLV E G P G + K+G +S T EL F + Sbjct: 231 ITDLNAKKKAHGISLFLV----EAGMP-GFTKGKPLEKVGQKSVDTCELFFEDVRLPASA 285 Query: 298 LLGDLN------VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILID 351 LLG N ++ P E + I + + E +Y R+R G L + Sbjct: 286 LLGKENQGFYMLMNQLPRERLII------GVGCQAHTEFMFEETRNYVRQRKAFGKTLGN 339 Query: 352 QPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-EAAYARIMAPITKYWCCKMAPA 410 ++ +A++ I + SF + R E E A ++KYW + Sbjct: 340 IQTIQHKLAELKTLIC--------IGRSFQDDCLRLESEGKLDTYTASMSKYWGSDVINK 391 Query: 411 VIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 V E ++ GG GY+ E IAR + ++ +I GS M Sbjct: 392 VATECLQLHGGWGYMWEYPIARAFCDARVGAIYGGSNEIM 431 >gi|299531019|ref|ZP_07044432.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas testosteroni S44] gi|298720976|gb|EFI61920.1| acyl-CoA dehydrogenase domain-containing protein [Comamonas testosteroni S44] Length = 406 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 36/273 (13%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLS-SPMSDAFIMLA 247 P+ + AI LTE + G+D A+ Q + + +G Y L+G K F+S SP +D +++A Sbjct: 139 PVARAEKAICFALTESQAGSDAGAV--QTRAVCEGEHYVLTGRKRFISGSPFADFAVLMA 196 Query: 248 QV--EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVEL------------EFSN 293 EG V + ++ +P K G + L E Sbjct: 197 STAPEGSVEREISAFFVDLAAPGVEVVSGYKTMAGQSHTGDIHLNSVRVPVAQLIGEPGR 256 Query: 294 TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP 353 G LG + V+ L++ A++ ++ + +L +A YA R G + Sbjct: 257 GLGLALGRITVNR--------LLHC-PAMLGLA--QCALRDARDYALSRQQFGRSIAQFQ 305 Query: 354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIA 413 ++ +AD+A D AA AL A + D AR A ++K +C + A A+ Sbjct: 306 SIQHMLADMATDWMAARALMIHTARALDAGID-------ARAQASMSKLFCSEKAFAIAD 358 Query: 414 EAMECIGGSGYIEERSIARHYRESPANSILLGS 446 A++ GG G ++ R + +R +L G+ Sbjct: 359 RAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTGT 391 >gi|154295184|ref|XP_001548029.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10] gi|150844218|gb|EDN19411.1| acyl-CoA dehydrogenase [Botryotinia fuckeliana B05.10] Length = 554 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D+A +T + + DG Y ++G K ++++ + + A G+ G Sbjct: 278 ICLAITEPDAGSDVANLTCEAKLTEDGKHYIVNGEKKWITNGIWSDYFTTAVRTGKDGMN 337 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 V LL + S G+ +++ + G S+ T + F + L+G N + K Sbjct: 338 GVSVLLIERSAGGVSTRKMDCQ-GVWSSGTTYVTFEDVKVPVENLIGKEN------QGFK 390 Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +++ + I + RV E + YA +R G LID PV++ +A +A I Sbjct: 391 VIMTNFNHERIGIIIQCLRFSRVCYEECVKYAHKRRTFGKKLIDHPVIRLKLAHMARQIE 450 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418 A+ + L + + E A R+ PI T +C + A + Sbjct: 451 ASYSW---LESLIYQCSKMGETEAMLRLGGPIAGLKAQATVTFEFCAREASQIFGGLSYS 507 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G + R YR+ A +I GS M+ Sbjct: 508 RGGQG----GKVERLYRDVRAYAIPGGSEEIML 536 >gi|23500808|ref|NP_700248.1| acyl-CoA dehydrogenase [Brucella suis 1330] gi|161621136|ref|YP_001595022.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|254703399|ref|ZP_05165227.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] gi|254710693|ref|ZP_05172504.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|256015850|ref|YP_003105859.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] gi|256029076|ref|ZP_05442690.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256058757|ref|ZP_05448974.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|256157266|ref|ZP_05455184.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|256253757|ref|ZP_05459293.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|260167846|ref|ZP_05754657.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|260567673|ref|ZP_05838142.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261220891|ref|ZP_05935172.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|261318262|ref|ZP_05957459.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|261322696|ref|ZP_05961893.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|261754026|ref|ZP_05997735.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] gi|261757282|ref|ZP_06000991.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265986060|ref|ZP_06098617.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|265995753|ref|ZP_06108310.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|23464467|gb|AAN34253.1| acyl-CoA dehydrogenase [Brucella suis 1330] gi|161337947|gb|ABX64251.1| acyl-CoA dehydrogenase [Brucella canis ATCC 23365] gi|255998510|gb|ACU50197.1| acyl-CoA dehydrogenase [Brucella microti CCM 4915] gi|260154338|gb|EEW89419.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|260919475|gb|EEX86128.1| acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|261297485|gb|EEY00982.1| acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|261298676|gb|EEY02173.1| acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|261737266|gb|EEY25262.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|261743779|gb|EEY31705.1| acyl-CoA dehydrogenase [Brucella suis bv. 3 str. 686] gi|262550050|gb|EEZ06211.1| acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|264658257|gb|EEZ28518.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] Length = 380 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 124 LTEPDVGSDAGAVRTTAERDGDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350 Query: 432 RHYRE 436 YR+ Sbjct: 351 HFYRD 355 >gi|311112528|ref|YP_003983750.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931] gi|310944022|gb|ADP40316.1| acyl-CoA dehydrogenase [Rothia dentocariosa ATCC 17931] Length = 571 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 33/272 (12%) Query: 197 AIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGC 255 +I GLTE+ G+D+ + + +K SDG + L+G KW +++ A +LA+ G Sbjct: 122 SISWGLTERGHGSDLLSTSVMARKTSDGGWALNGEKWMINNATRGRALTILARTGDEPG- 180 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSN----ATVELEFSNTFGFLLGDLNVSTG---- 307 PR L L Y + G T + ++ G L D + G Sbjct: 181 ---PRSLS------LFYMDKEEAQGTWEYLPKIQTHGIRGADISGITLRDTKIPQGRLIG 231 Query: 308 -PVEDMKILIYLDSAI------MSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIA 360 P + ++I++ +S+ L+ A+ +A R+ G IL+D P + +A Sbjct: 232 APGDGLEIVLRCLQVTRPLCTALSLGAADSGLSAALEFAAGRNTMGHILLDLPAAQDQLA 291 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIG 420 D+A+D+A A +S A S A +++P KY + ++ IG Sbjct: 292 DVAVDLAIAELMSVMGARHLQLNPSE------ASVISPSVKYLVPHIVDDIMVRITRFIG 345 Query: 421 GSGYIEERSIARHYRESPANSIL-LGSGNAMV 451 + + + + N ++ + GN++V Sbjct: 346 ARAVLADGQLGHVQKTVRDNRVVSIFDGNSVV 377 >gi|107025485|ref|YP_622996.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116693333|ref|YP_838866.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|254249891|ref|ZP_04943211.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] gi|105894859|gb|ABF78023.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054] gi|116651333|gb|ABK11973.1| isovaleryl-CoA dehydrogenase [Burkholderia cenocepacia HI2424] gi|124876392|gb|EAY66382.1| Acyl-CoA dehydrogenase [Burkholderia cenocepacia PC184] Length = 393 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A++S M L + Y R G + + +++ +AD+ A A Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S + R + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|317402667|gb|EFV83221.1| acyl-CoA dehydrogenase domain-containing protein [Achromobacter xylosoxidans C54] Length = 389 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 21/269 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E G+D+AA+ + + D Y L+G K W + ++D + + A+ G + Sbjct: 133 FALSEPDAGSDVAALACEARLEGDH-YVLNGAKTWISNGGIADFYCVFARTGEAPGARGI 191 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELE-----FSNTFGFLLGDLNVSTGPVEDMK 313 + D G I AT+ + S G ++ M Sbjct: 192 SAFVVDADTPGFEISERIELIAPHPLATITFDNCRIPVSQRLGEAGQGFKLAM-----MT 246 Query: 314 ILIYLDSAIMSVSGM-RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + I+ S + G R +L E + AR R + G L D + + A+ D+A I A+ L Sbjct: 247 LDIFRASVAAAALGFARRALDEGLARARSRRMFGQTLADLQLTQAALGDMATAIDASALL 306 Query: 373 SFRLANSFDEAKSRS-EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++R A D K R+ EAA A++ A + A +VI A++ GG+G + + Sbjct: 307 TYRAAWMRDVQKQRTTREAAMAKMTA-------TESAQSVIDRALQMFGGAGVVSGMPVE 359 Query: 432 RHYRESPANSILLGSGNAMVLDVLNLLEK 460 + YRE A I G+ L + L K Sbjct: 360 KLYREIRALRIYEGATEVQKLIIARELLK 388 >gi|258511817|ref|YP_003185251.1| acyl-CoA dehydrogenase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478543|gb|ACV58862.1| acyl-CoA dehydrogenase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 397 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 30/270 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQ 248 P + GLTE G+D+AA+ + + D Y L+G K W + ++D F++ A Sbjct: 113 PQARGEKIGAFGLTEPNAGSDVAAMRTTAVRDGDS-YILNGSKIWISLADVADHFLVFAY 171 Query: 249 VEGR-----VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFG 296 + + F+V R E G + +K K+G R+ T EL F N G Sbjct: 172 TDRSKKHHGITAFIVERGWE-----GFSTRSIKGKLGIRAGNTGELFFDHVRVPIENRLG 226 Query: 297 FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +++ + + + + + S + Y R G + +++ Sbjct: 227 EEGEGFKIAMSALDNGRFTVAAGACGCIAACLEAS----VKYCHERETFGQPIGKHQLVQ 282 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 + IA +A ++ + L +R ++ + E + A+ +A C A ++A+ Sbjct: 283 QMIAKMAANLDISRLLVYRAGWLKNQGLPNTRETSLAKWVA-------CDAAWEAASDAV 335 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + G GY E + R+ R + A I G+ Sbjct: 336 QIHGAYGYSNEYPVERYLRNAKAPVIYEGT 365 >gi|170750182|ref|YP_001756442.1| acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656704|gb|ACB25759.1| acyl-CoA dehydrogenase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 381 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVGCFLVPR 260 LTE G+D AA+ ++ ++ D Y LSG K F+S + SD ++ + + + Sbjct: 124 LTEPGSGSDAAALRTRAERDGD-HYVLSGEKQFISGAGASDLYVCMVRTGEAGPSGISAI 182 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLGDLNVSTGPVEDMK 313 ++E G+P GL + + K+G + T + F N G ++ ++ + Sbjct: 183 VVEKGTP-GLSFGADERKMGWNAQPTRAVRFDGCRVPVGNRLGAEGQGFKIAMSGLDGGR 241 Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373 + I A S+ G + +L +A+ Y R G L D ++ +AD+A + + Sbjct: 242 LNI----AACSLGGAQAALDKALAYMGDRRAFGARLTDFQALQFRLADMATSLEVSRTFL 297 Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 A + D AK S A + + K A V +A++ GG GY+ E + + Sbjct: 298 RHAAAALD-AKDPS-----ATQLCAMAKRHVTDAAFEVANQALQLHGGYGYLAEYGVEKI 351 Query: 434 YRESPANSILLGSGNAMVLDVLNLLEKG 461 R+ + IL G+ M L + L G Sbjct: 352 VRDLRVHQILEGTNEIMRLIIARGLTGG 379 >gi|52421177|dbj|BAD51425.1| butyryl-CoA dehydrogenase [Butyrivibrio fibrisolvens] Length = 387 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 28/265 (10%) Query: 195 SVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE--- 250 SV L L + G A+ S+ K + L+G K F+++ +D +I++A + Sbjct: 124 SVLQSLALVQTLQGVQTKAVLSEDGKT----WTLNGSKCFITNGKEADVYIIIAYTDIVE 179 Query: 251 ---GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 GR ++E +P G + ++K+G R +AT EL F + ++ N Sbjct: 180 DKKGRKQKKFTAFIVEKDTP-GFTFGTKEHKMGIRGSATYELIFQDC---VIPAENQLGA 235 Query: 308 PVEDMKILIY-LDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIAD 361 + I ++ LD + ++ + LAE I Y + R G + + +A+ Sbjct: 236 RGKGFPIAMHTLDGGRIGIAAQALGLAEGALERTIAYVKERKQFGRSIAQFQNTQFQLAN 295 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A ++ AA L ++ A + S EAA A++ A T A V + ++ +GG Sbjct: 296 LATEVEAAQLLVYKAAEAKRTQDRYSVEAAKAKLFAAET-------AMDVTTKCVQLLGG 348 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GYI E + R R++ I G+ Sbjct: 349 YGYIREYEVERMMRDAKITEIYEGT 373 >gi|319779856|ref|YP_004139332.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165744|gb|ADV09282.1| acyl-CoA dehydrogenase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 382 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 31/262 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L+E R G+D+A + D Y L+G K W + ++D +++ A+ G + Sbjct: 125 FALSEPRSGSDVANTEMTATRDGDS-YVLTGEKTWISNGGIADLYVVFARTGEAPGAKGL 183 Query: 259 PRLLEDGSPNGL-CYQRLK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 L G GL +RL+ + + S V L + G P + + Sbjct: 184 SAFLVPGDAKGLGIAERLEVIAPHPLARLSFERVRLPVTALIG----------KPGDGFR 233 Query: 314 ILIYLDSAIMSVSGM------RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + + S G R +L E+I R + G + + +++ IAD+ALD+ Sbjct: 234 IAMSVLDVFRSTVGAAALGFARRALDESIKRVAERKLFGAPMAELQMVQGHIADMALDVD 293 Query: 368 AATALSFRLANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA L +R A + D +R + EAA A++ A A VI +A++ GG G + Sbjct: 294 AAALLVYRAAWTKDMGAARVTREAAMAKLFA-------TDKAQEVIDKAVQLHGGDGVRK 346 Query: 427 ERSIARHYRESPANSILLGSGN 448 + YRE A I G+ + Sbjct: 347 GHIVESLYREIRALRIYEGASD 368 >gi|107022415|ref|YP_620742.1| acyl-CoA dehydrogenase-like [Burkholderia cenocepacia AU 1054] gi|116689363|ref|YP_834986.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105892604|gb|ABF75769.1| acyl-CoA dehydrogenase-like protein [Burkholderia cenocepacia AU 1054] gi|116647452|gb|ABK08093.1| acyl-CoA dehydrogenase domain protein [Burkholderia cenocepacia HI2424] Length = 609 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/315 (22%), Positives = 122/315 (38%), Gaps = 65/315 (20%) Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSSPMSD-----AFIMLAQV--- 249 L+E + G+ ++ I + +G Y L+G+K ++S + ++LA++ Sbjct: 163 LSEPQAGSSLSDIATRADFEGASPLGPRYRLTGNKMWISGGEHELAENIVHLVLAKIPDE 222 Query: 250 EGR-------VGCFLVPRLLE------DGSPNGLCYQRLKNKIGNRSNATVELEF----- 291 GR + F+VP+ L G N + L +K+G R L F Sbjct: 223 HGRLQPGTRGISLFIVPKFLTGTDGDASGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGTR 282 Query: 292 ------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYAR 340 + G+L+G N + M ++ A + V V+L A+ YAR Sbjct: 283 YRPEGRAGAIGYLVGQPNHGLAYMFHM-----MNEARIGVGAGAVALGYTGYLHALDYAR 337 Query: 341 RR-------------HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 R ++D P ++R + + AL A DEA++ Sbjct: 338 NRPQGRPLGPAAKDAAAPQAPIVDHPDVRRMLLAQKAYVEGGLALILYCAKLVDEARAHG 397 Query: 388 EEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441 + A A I+ PI K W + A A++ GG GY + ++ R YR++ N Sbjct: 398 DATARAEATRLLDILTPIAKSWPSQWCLAANDLAIQVHGGYGYTRDYAVERLYRDNRLNP 457 Query: 442 ILLGSGNAMVLDVLN 456 I G+ LD+L Sbjct: 458 IHEGTHGIQALDLLG 472 >gi|330965352|gb|EGH65612.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 387 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVEVPEENLLGALDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ IAD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + +A++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|163754130|ref|ZP_02161253.1| ribonuclease HII [Kordia algicida OT-1] gi|161326344|gb|EDP97670.1| ribonuclease HII [Kordia algicida OT-1] Length = 380 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 40/263 (15%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG-----C 255 L+E G+D + + + D Y ++G K W S +D ++++AQ + G Sbjct: 125 LSEPEAGSDATSQKTTAIDMGDH-YVINGTKNWITSGGRADVYLVIAQTDKDKGHRGINA 183 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLN 303 F+V E G+P G ++K+G R + T L+F++ FGF Sbjct: 184 FIV----EKGTP-GFDIGPKEDKLGIRGSDTHTLQFNDVKVPKENRIGEDGFGFKFAMKT 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 +S G I + + + ++ LA + Y++ R G + + + +AD+ Sbjct: 239 LSGGR-------IGIAAQALGIASGAYELA--LKYSKERKAFGTEICNHQAIAFKLADMY 289 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 ++I AA L A D ++ +A A++ A K A V EA++ GG+G Sbjct: 290 IEITAARHLVMEAACKKDAKENYDMASAVAKLFA-------SKTAMDVTVEAVQVHGGNG 342 Query: 424 YIEERSIARHYRESPANSILLGS 446 +++E + R R++ I G+ Sbjct: 343 FVKEYHVERLMRDAKITQIYEGT 365 >gi|109109376|ref|XP_001083487.1| PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Macaca mulatta] Length = 415 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 44/269 (16%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEG----RVGCF 256 LTE G+D A++ + +K D Y L+G K F+S SD ++++ + G + C Sbjct: 160 LTEPGSGSDAASLLTSAKKQGDH-YILNGSKAFISGGGESDIYVVMCRTGGPGPKGISCV 218 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 +V E G+P GL + + + K+G S T + F + +GD E Sbjct: 219 VV----EKGTP-GLSFGKKEKKVGWNSQPTRAVIFEDCAVPLANRIGD--------EGQG 265 Query: 314 ILIYLDSAIMSVSGMRVSLAE----AIH--------YARRRHVSGGILIDQPVMKRAIAD 361 LI A+ ++G R+++A A H + + R G L ++ +AD Sbjct: 266 FLI----AVKGLNGGRINIASCSLGAAHASVILTRDHLKVRKQFGEPLASNQYLQFTLAD 321 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +A + AA L R + A + EE A + + K + A+ +A++ GG Sbjct: 322 MATRLVAAR-LMIR-----NAAVALQEERKEAVALCSMAKLFATDECFAICNQALQMHGG 375 Query: 422 SGYIEERSIARHYRESPANSILLGSGNAM 450 GY+++ ++ ++ R+S + IL GS M Sbjct: 376 YGYLKDYAVQQYMRDSRVHQILEGSNEVM 404 >gi|150249475|gb|ABR67753.1| CmnJ [Saccharothrix mutabilis subsp. capreolus] Length = 383 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 28/296 (9%) Query: 170 VHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGI 225 V D + +R P + P + + L TE GG+D+ A+T+ + G Sbjct: 89 VQTDIVAPLLARAGTPEVRRDVLRPAIRGELVAALAATEPAGGSDLGALTTTAVRTERG- 147 Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284 + ++G K F+++ ++D ++L + G + L+ + G+ R K+G+RS Sbjct: 148 FTVNGTKAFITNGSVADFAVVLCRTGEAAGIGDLALLVVPTNLAGVRQVRHTGKLGHRSC 207 Query: 285 ATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDS----AIMSVSGMRVSLAEAIH 337 L F++ +LLG++ G +++ + A++++ L +H Sbjct: 208 DHGTLTFTDVEVPAAYLLGEV----GEGYELQTRTFTRERCFLAVVALGQAERVLRATVH 263 Query: 338 YARRRHVSGGILIDQPVMKRAIA--DIALDIAAATALSFRLANSFDEAKSRSEEAAYARI 395 +ARRR V G L D + +A D LD+ + A EA + A Sbjct: 264 HARRRRVLGRALTDHQAIGFRLAELDAELDLVRSYA---------GEAYQLLADGAQCLR 314 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 A I K ++ V ++ G +GY+ + R YR++ A S G+ A++ Sbjct: 315 EASIAKLRATRLLREVADVGLQVRGAAGYLGVDDVERTYRDARAGSFAGGADEALL 370 >gi|119475210|ref|ZP_01615563.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119451413|gb|EAW32646.1| acyl-CoA dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 388 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 35/277 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA----QVEGRVG-- 254 LTE G+D ++ S +K Y L+G K F+S +D +++A Q EG G Sbjct: 124 LTESGAGSDAGSLRSTAKKQGQ-QYLLNGSKMFISGAGDTDVLVVMARTGTQEEGSAGIS 182 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV-EDMK 313 F +P L +G+ Y + + K+G S T + F N +L D + G E K Sbjct: 183 AFAIPAQL-----DGIHYGKNEAKMGWNSQPTRAISFEN----VLVDQDSLLGQEGEGFK 233 Query: 314 ILIY-LDSAIMSVSGMRVSLAEAI-----HYARRRHVSGGILIDQPVMKRAIADIALDIA 367 I + LD ++++ + A+A Y R G L ++ +AD+ ++ Sbjct: 234 IAMRGLDGGRINIATCSIGAAQACINHSQKYMLERQQFGKPLAAFQALQFKLADMLTELI 293 Query: 368 AATALSFRLANSFDEAKS--RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 AA + RLA S +A +S A A+ A + C +AM+ GG GY+ Sbjct: 294 AARQM-VRLAASKLDADDVDKSTYCAMAKRFATDAGFNICN-------DAMQLHGGYGYL 345 Query: 426 EERSIARHYRESPANSILLGSGNAM-VLDVLNLLEKG 461 +E + R R++ + IL G+ M V+ L E G Sbjct: 346 KEYPLERFMRDARVHQILEGTNEIMRVITARRLFEVG 382 >gi|119717728|ref|YP_924693.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614] gi|119538389|gb|ABL83006.1| butyryl-CoA dehydrogenase [Nocardioides sp. JS614] Length = 399 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 33/276 (11%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGC--- 255 G GLTE G+D A ++ + +G + ++G K F+++ S+ + V R G Sbjct: 128 GFGLTEPGAGSDAGATKTRA-VLENGEWVVNGSKQFITNSGSE-LTSVVTVTARTGTREN 185 Query: 256 -------FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVS 305 +VP G+P G ++ +K+G ++ T L + LLG+ Sbjct: 186 GSAEISTIMVP----SGTP-GFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG 240 Query: 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIA 360 + L LD ++++ + V +A + YA R GG + + + IA Sbjct: 241 Y-----AQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIA 295 Query: 361 DIALDIAAATALSFRLANSFDEAKSRSEEAAYA-RIMAPITKYWCCKMAPAVIAEAMECI 419 D+ + + A+ L++R A D + + + A + K + + A A + Sbjct: 296 DLEVMLHASRLLTYRAAAMKDSQRDGGGASMKEFKQAAAVAKLYATESAVTATRIATQVF 355 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 GG G++EE +AR YR+ A + +G G + V +L Sbjct: 356 GGYGFMEEYPVARFYRD--AKVLEIGEGTSEVQRLL 389 >gi|325675374|ref|ZP_08155058.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553345|gb|EGD23023.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 382 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+ + + I DG Y ++G K F++S + F++ A G G V Sbjct: 124 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGAKTFITSAVRADFVVTAVRTGGPGAGGV 181 Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L +E G+P G R +K+G R++ T EL F + L+G+ N + + Sbjct: 182 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFL 240 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + A + + + L + + R R G LI + ++ + ++ + A + Sbjct: 241 TERIALAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTR 300 Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L S + E +A+ A W V +A++ GG GY+ E + R Sbjct: 301 TLVERSLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQ 353 Query: 434 YRESPANSILLGSGNAMVLDVL 455 YR+ + +G G +L L Sbjct: 354 YRD--MRILGIGGGTTEILTSL 373 >gi|312114593|ref|YP_004012189.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311219722|gb|ADP71090.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 395 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 25/242 (10%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G+D ++ ++ +K +DG + LSG K W +SP++D F++ A+ + G + F+ Sbjct: 138 FGLTEPDAGSDPGSMKTRARK-TDGGWLLSGSKIWITNSPVADVFVVWAKDDAGIIKGFI 196 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILI 316 + + ++ GL +++ K R++ T E+ + F + D N VE +K Sbjct: 197 LEKGMK-----GLSAPKIEGKFSLRASITGEIVMESVF---VPDEN-RLPNVEGLKGPFG 247 Query: 317 YLDSAIMSVSGMRVSLAEAIHYARRRHV-----SGGILIDQPVMKRAIADIALDIAAATA 371 L+ A ++ + AE +A R++ G L + +++ +A++ +IA Sbjct: 248 CLNRARYGIAWGVLGAAEFCFHASRQYTLDRKQFGRPLANTQLVQLKLANMETEIALGLH 307 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 RL FDE K E M + K C A + A + GG+G +E + Sbjct: 308 ACLRLGRLFDEQKMAPE-------MISMLKRNNCGKALDIARIARDMHGGNGISDEFHVI 360 Query: 432 RH 433 RH Sbjct: 361 RH 362 >gi|312116094|ref|YP_004013690.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311221223|gb|ADP72591.1| acyl-CoA dehydrogenase domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 378 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 30/260 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVG-----C 255 LTE G+D +AI + ++ D + ++G K F+++ +D I+ A + G Sbjct: 123 LTEPHVGSDASAIATTARRDGDS-FIINGAKQFITTGKHADVAIVFAVTDKSAGKKGISA 181 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGD----LNVSTGP 308 FLVP + G R+++K+G +++ T ++ F N LLG ++ Sbjct: 182 FLVPT-----ATPGYVVARIEDKMGQKASDTAQILFENCRVPASALLGKEGDGYRIALSN 236 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 +E +I I A +V R +L A+ YA+ R G +I+ + +AD+A ++ A Sbjct: 237 LEAGRIGI----ASQAVGMARAALEAAVAYAKERQTFGKPIIEHQAVSFRLADMATEVDA 292 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A L +R A D +EA+ A++ A +MA V + A++ GG GY+ + Sbjct: 293 ARLLVWRAAMLKDAGLPCLKEASMAKMFAS-------EMAERVCSGAIQVHGGYGYVSDF 345 Query: 429 SIARHYRESPANSILLGSGN 448 + R YR+ I G+ + Sbjct: 346 PVERIYRDVRVCQIYEGAND 365 >gi|261202146|ref|XP_002628287.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239590384|gb|EEQ72965.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239612094|gb|EEQ89081.1| isovaleryl-CoA dehydrogenase [Ajellomyces dermatitidis ER-3] Length = 410 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 43/289 (14%) Query: 187 NKAPMQKTSVAIGL---------GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLS 236 N +P QK GL ++E G+D+ ++ + + + DG + L+G K W + Sbjct: 119 NGSPEQKARFLPGLISGEKIGALAMSEHSAGSDVVSMKTTAKAV-DGGFLLNGTKMWITN 177 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF- 295 P +D ++ A+ + G + + + + G R +K+G R + T EL F F Sbjct: 178 GPDADYIVVYAKTKPDQGSKGITAFVVEKTFKGFSCARKLDKLGMRGSNTGELIFEGVFV 237 Query: 296 --GFLLGDLNVSTGPVEDMKILIY---LDSAIMSVSG---MRVSLAEAIHYARRRHVSGG 347 +LG+LN +K+L+ L+ ++S M+ +L + Y R G Sbjct: 238 PRENMLGELN------RGVKVLMEGLDLERLVLSAGPLGIMQAALDLVLPYTHTRKQFGI 291 Query: 348 ILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS----------RSEEAAYARIMA 397 + +++ +AD+ ++A+ A ++ A DEA + R+++ A A + A Sbjct: 292 PIARNQLIQGKLADMYTKLSASRAYTYTTARQIDEAAASSSEASNSAIRTQDCAGAILYA 351 Query: 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 C +A++ +GG+GYI E R R++ I G+ Sbjct: 352 AERATECA-------LDAIQLMGGNGYINEIPAGRLLRDAKLYEIGAGT 393 >gi|167589376|ref|ZP_02381764.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 393 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-RYVLNGTKMWITNGPDCDTLVVYAKTDIEAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A++S M L + Y R G + + +++ +AD+ A A Sbjct: 245 LDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S + R + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|167577576|ref|ZP_02370450.1| isovaleryl-CoA dehydrogenase [Burkholderia thailandensis TXDOH] Length = 393 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + + + L+G K W + P D ++ A+ E G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADRRGS-RFVLNGTKMWITNGPDCDTLVVYAKTEPEAGARGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG+LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGELN---GGVKVLMSG 244 Query: 316 IYLDSAIMS---VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + A+++ M L + Y R G + + +++ IAD+ A A Sbjct: 245 LDYERAVLAGGPTGIMAACLDAVVPYVHDRKQFGQPIGEFQLIQGKIADMYTTFQACRAY 304 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + + D A S +AR + + A + EA++ +GG+GYI E + R Sbjct: 305 LYAVGRHLDSAGS--AHVRHARKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYPVGR 362 Query: 433 HYRESPANSILLGS 446 +R++ I G+ Sbjct: 363 LWRDAKLYEIGAGT 376 >gi|146092445|ref|XP_001470295.1| acyl-coa dehydrogenase [Leishmania infantum] gi|134085089|emb|CAM69490.1| putative acyl-CoA dehydrogenase [Leishmania infantum JPCM5] Length = 629 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 55/363 (15%) Query: 142 LMAQLEAGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG 199 ++A G M ++ + LM+ + + + PK+ S E+ T Sbjct: 144 MIATANWGFSMYSGLSLGACRTLMSWASDELKDQYLPKLVSGEWSGT------------- 190 Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSS---PMSDAFI--MLAQVEGRV 253 + LTE + GTD++ + ++ + DG Y ++G K F+S+ ++D I +LA++ + Sbjct: 191 MCLTEPQCGTDLSQVKTKAEPSGDGKSYRITGTKIFISAGDHDLTDNIIHVVLARLPNSL 250 Query: 254 ------GCFLVPRLL--EDGSPNGL----CYQRLKNKIGNRSNATVELEFSNTFGFLLGD 301 FLVPR + +DGS G C L+ K+G + ++T +L F N+ G+L+G+ Sbjct: 251 PSTKGLSLFLVPRHVVNDDGSLEGAKNVECIA-LEKKMGIKGSSTCQLSFHNSVGYLIGE 309 Query: 302 LNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR---HVSGGILIDQPVMKRA 358 + + + A+ V ++ + YAR R GG + V R Sbjct: 310 PSAGMKQMFTFMNAARVGCALEGVCHAELAFQNGLRYARERRSMRALGGTKEPEMVADRI 369 Query: 359 I--ADIALDIAAATALS-------FRLANSFDEAKSRSEEAAYARI------MAPITKYW 403 I A++ ++ A A++ + D + + A + PI K Sbjct: 370 ICHANVRQNVLFAKAIAEGGRALLLDVGRLLDLHAAAPDAATAEALDHEIGFYTPIAKAC 429 Query: 404 CCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLN---LLEK 460 + + ++ GG GYI+ + + R+S +I G+ LD + L K Sbjct: 430 VTEWGVEAASRLLQVWGGHGYIKGNGMEQILRDSRIGTIYEGTTGVQALDFIGRKVLSTK 489 Query: 461 GTN 463 G N Sbjct: 490 GGN 492 >gi|160900259|ref|YP_001565841.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160365843|gb|ABX37456.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 382 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 162/416 (38%), Gaps = 92/416 (22%) Query: 78 NYNTPQLHAYGPGGERWDKVEFHP----------AWHALLRRSIHDGLHCSI-------- 119 +++TP+L + R+ + E P HA+ RR+ GL C+ Sbjct: 8 SWSTPELESLRATAVRFLETEMQPQDEAARQRGNVGHAIWRRAGELGLLCTDIPEDYGGG 67 Query: 120 -WDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKI 178 D E V+ ++ AR L MS SV S L+ H A K Sbjct: 68 GGDFRHEAVIHEEM-----ARRALSG-------MSNSVHSIVAHYLLN----HGTEAQK- 110 Query: 179 FSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP 238 R+Y P M + + + +TE G+D+ + ++ + + DG Y ++G K F+++ Sbjct: 111 --RKYLPA----MARGELVGAIAMTEPGAGSDLQGVRTRAE-LRDGRYRINGSKTFITNG 163 Query: 239 MSDAFIMLA----QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT 294 + I++ +G G ++ ++E G R+ +K+G ++ T EL F + Sbjct: 164 LLAGLILVVCKTDPAQGARGTSIL--IVETRDCAGFRVGRVLDKMGMKAQDTSELFFDDV 221 Query: 295 F-------------GF--LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYA 339 GF L+GDL P E + I + +++ M + + Y Sbjct: 222 TVPQDALLGGREGQGFYQLMGDL-----PYERLII------GLTALACMEGAYEATLAYV 270 Query: 340 RRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR-----LANSFDEAKSRSEEAAYAR 394 R R G + D + +A++A + A R +A + D A Sbjct: 271 RERRAFGQAIADMQNTRFKLAEVATTLTVGRAFIDRCVEQLVAGTLDTAT---------- 320 Query: 395 IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 A + K W + V+ E ++ GG GY+ E + R Y ++ I G+ M Sbjct: 321 --ASMAKLWGSEAQGRVLDELVQLHGGYGYMNEYMVTRMYADARVQRIYGGTSEIM 374 >gi|59803160|gb|AAX07730.1| isovaleryl-CoA dehydrogenase-like protein [Magnaporthe grisea] Length = 470 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR----- 252 L ++E G+D+ ++ ++ + +DG + L+G K W + P +D I+ A+ + Sbjct: 205 LAMSESGSGSDVVSMRTRATRTADGSGWLLNGSKMWITNGPDADVIIVYAKSDTECQPSK 264 Query: 253 -VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 + F+V R P C ++L +K+G R + T EL N +LG++N Sbjct: 265 GITAFIVER-----QPGLQCLRKL-DKMGMRGSNTGELVLENVIVPDENVLGEVNAGXRV 318 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L L + + M+ +L A+ YA R G + + +++ +AD+ + Sbjct: 319 LXEGLDLERLVLSAGPLGIMQAALDVALPYAHARQQFGRPIAEFQLVQGRLADMYTKLQV 378 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 + A ++ A DE S E A I + + A V + ++ +GG GY E+ Sbjct: 379 SRAYTYATARRIDE----SGEIKTADCAGAI--LYAAERATEVALDCIQVLGGMGYTEDM 432 Query: 429 SIARHYRESPANSILLGSGNAMV 451 +R R++ I G+G + V Sbjct: 433 PASRLLRDAKLYEI--GAGTSEV 453 >gi|322368810|ref|ZP_08043377.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] gi|320551541|gb|EFW93188.1| acyl-CoA dehydrogenase [Haladaptatus paucihalophilus DX253] Length = 374 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 40/264 (15%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEG----RVG 254 L+E G++ A ++++ ++ D Y ++G K W + +D ++ A+ + V Sbjct: 120 FALSEPEAGSNPAEMSTEARREGDE-YVINGKKQWITNGKRADVIVLFAKTDRDDPRSVT 178 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314 F+VP+ G+ + + K+G R++ T L F + + E+ K Sbjct: 179 QFVVPK------DAGVEVGKKEEKLGLRASDTTSLIFDDVR------IPAEYRLTEEGK- 225 Query: 315 LIYLDSAIMSVSGMRVSLA------------EAIHYARRRHVSGGILIDQPVMKRAIADI 362 L +A ++G R+ +A +A+ YA+ R + D ++ +AD+ Sbjct: 226 --GLSAAFHILTGGRIGIASQAVGLSQAALDQAVEYAQDREQFDRPIADIQTIRHKLADM 283 Query: 363 ALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + A L+ A D + + A+ A KY+ + A + EA++ GG Sbjct: 284 QTKLQAGRLLTRDAARRADNGEDHAAAASMA-------KYFASESAVEITNEAVQIHGGY 336 Query: 423 GYIEERSIARHYRESPANSILLGS 446 GY + + R YR+S +I G+ Sbjct: 337 GYTTDFDVERFYRDSKITTIYEGT 360 >gi|213967035|ref|ZP_03395185.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1] gi|301385220|ref|ZP_07233638.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato Max13] gi|302059613|ref|ZP_07251154.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato K40] gi|302130161|ref|ZP_07256151.1| isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928357|gb|EEB61902.1| Isovaleryl-CoA dehydrogenase [Pseudomonas syringae pv. tomato T1] Length = 387 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 34/314 (10%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P + +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCINQINRNGNPAQKARYLPKLISGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + K D Y L+G K W + P +D +++ A+ + + + + Sbjct: 134 NAGSDVVSMKLRADKRGD-RYVLNGSKTWITNGPDADTYVIYAKTDLEKAAHGISAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFS-------NTFGFLLGDLNVSTGPVEDMKILIY 317 G +K+G R + T EL F N G L G + V ++ Sbjct: 193 RDWKGFSRGSKFDKLGMRGSNTCELFFDDVQVPEENLLGALDGGVRV---------LMSG 243 Query: 318 LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 LD + +SG M+ + + Y R G + + +++ IAD+ + A+ A Sbjct: 244 LDYERVVLSGGPTGIMQACMDVVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAY 303 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 + +A + D ++ ++AA + + + A + +A++ +GG+GYI E R Sbjct: 304 LYAVAQACDRGETTRKDAAGVIL-------YSAERATQMALDAIQILGGNGYINEFPAGR 356 Query: 433 HYRESPANSILLGS 446 R++ I G+ Sbjct: 357 LLRDAKLYEIGAGT 370 >gi|254460173|ref|ZP_05073589.1| glutaryl-CoA dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206676762|gb|EDZ41249.1| glutaryl-CoA dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 407 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 31/246 (12%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE---GRVGC 255 GLTE G+D + ++ K + G Y ++G K W +SP++D F++ A+ E G++ Sbjct: 149 FGLTEPDAGSDPGGMKTRAVKTATG-YKITGSKMWISNSPIADVFVVWAKSEEHGGKIRG 207 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDM 312 F +LE G GL ++ NK+ R++ T E+ N LL ++ GP Sbjct: 208 F----VLEKGM-TGLSAPKIGNKLSLRASITGEIVMDNVEVGEDALLPNVQGLKGP---- 258 Query: 313 KILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 L+ A +S + AE A Y R G L + ++ +AD+ +IA Sbjct: 259 --FGCLNRARYGISWGVMGAAEFCWHGARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIA 316 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEE 427 S ++ D A + E M I K C A + + + GG+G E Sbjct: 317 LGLQASLQVGRLMDAANAAPE-------MISIVKRNNCGKALDIARMSRDMHGGNGISAE 369 Query: 428 RSIARH 433 + RH Sbjct: 370 FGVIRH 375 >gi|327439890|dbj|BAK16255.1| acyl-CoA dehydrogenase [Solibacillus silvestris StLB046] Length = 388 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 33/258 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQV-------EGRV 253 LTE G+D I Q + + DG + L+G K F+++ F M+ V G V Sbjct: 128 LTEPDAGSDARGI--QMRAVKDGDHWVLNGEKVFITNGNEADFAMVFAVTDKEKGANGGV 185 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNAT-----VELEFSNTFGFLLGDLNVSTGP 308 CFLV + E G + Y +G AT V + N G L N+ Sbjct: 186 TCFLVDK--EMGWKSEYIY-----TMGEWGPATLVFDNVRVPEENILGELGQGFNLGMQW 238 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + +I ++ L AI Y++ R G + ++ ++ IAD A++I A Sbjct: 239 IGQGRYMI----PAGAIGAAERLLQMAIDYSKTRVTFGKPIAERQAIQWMIADSAVEIEA 294 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + FR A + +++ A++ I MA V+ ++ GG GY +E Sbjct: 295 AKWIVFRAAWMAENGMDPRHQSSMAKLNGAI-------MANQVVDRVLQIHGGMGYTKEL 347 Query: 429 SIARHYRESPANSILLGS 446 I R YRE I G+ Sbjct: 348 PIERWYRELRLYRIFEGT 365 >gi|326481986|gb|EGE05996.1| acyl-CoA dehydrogenase [Trichophyton equinum CBS 127.97] Length = 435 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPR 260 L+E G+D A+ ++ +K S G Y L+G K W +S + FI+ A ++ G + Sbjct: 176 LSEPVSGSDAFALQTKAEKTSSG-YKLNGSKMWITNSMEAGFFIVFANLDPSKGYKGITA 234 Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI- 316 + + G + + K+G R+++T L F + LLG+ + K I Sbjct: 235 FIVEKDMPGFSIAKKEKKLGIRASSTCVLNFDDVEVPKENLLGEEG------QGYKYAIS 288 Query: 317 YLDSAIMSVSGMRVSLA------EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAAT 370 L+ + ++ LA A + R G ++ M+ +A +IAAA Sbjct: 289 LLNEGRIGIAAQMTGLALGAWENAAGYIWNDRKQFGQLIGTFQGMQHQVAQSYTEIAAAR 348 Query: 371 ALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSI 430 AL F A + + ++AA A++ + ++A V A+E +GG G++ E Sbjct: 349 ALVFNAARKKEVGQDFVQDAAMAKL-------YASQVAGRVSGLAVEWMGGMGFVREGIA 401 Query: 431 ARHYRESPANSILLGSGNAMVLDVLNLLEK 460 + +R+S +I G+ N + + L+K Sbjct: 402 EKMFRDSKIGAIYEGTSNIQLQTIAKSLQK 431 >gi|225679793|gb|EEH18077.1| short-chain specific acyl-CoA dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 522 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCF 256 I L +TE G+D++ IT + + DG Y ++G K ++++ + + A G G Sbjct: 246 ICLAITEPDAGSDVSNITCEAKLTPDGKHYIVNGEKKWITNGIWSEYFTTAVRTGEAGMN 305 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 + LL + S G+ +++ + G ++ T + F + L+G N + K Sbjct: 306 GISVLLIERSAGGVKTRKMDCQ-GMSTSGTTYVTFEDVKVPVENLIGKEN------QGFK 358 Query: 314 ILIY------LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIA 367 +++ + I V RV E++ YA +R G LID PV++ +A +A I Sbjct: 359 VIMMNFNHERIGIIIQCVRFSRVCYEESVKYAHKRRTFGNRLIDHPVIRMKLAHMARQIE 418 Query: 368 AATALSFRLANSFDEAKSRSEEAAYARIMAPI---------TKYWCCKMAPAVIAEAMEC 418 A+ L N + +S + A R+ I T +C + A + Sbjct: 419 ASHNW---LENIIYQCQSMDDTEAAFRLGGAIAGLKAQSTTTFEFCAREASQIFGGLSYT 475 Query: 419 IGGSGYIEERSIARHYRESPANSILLGSGNAMV 451 GG G I R YR+ A +I GS M+ Sbjct: 476 RGGQG----GKIERLYRDVRAYAIPGGSEEIML 504 >gi|209519297|ref|ZP_03268097.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] gi|209500246|gb|EEA00302.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. H160] Length = 382 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 28/270 (10%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS----SPMSDAFI 244 AP+ LTE + G++ + ++ + + DG + L+G K F++ + ++ F Sbjct: 115 APLASGKAIGAFCLTEPQAGSEANNLKTRAE-LRDGKWVLNGSKQFVTNAQRAKIAIVFA 173 Query: 245 MLAQVEGRVG--CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDL 302 + + G+ G F+VP +P G + K+G R++ T + N + + Sbjct: 174 VTDPLAGKKGLSAFIVP----TDTP-GFIVGHPEKKMGIRASDTCPITLDNC---AIPEA 225 Query: 303 NVSTGPVEDMKI-LIYLDSAIMSVSGMRVSLAEAIH-----YARRRHVSGGILIDQPVMK 356 N+ P E +KI L L+ + ++ +A A YA R G +I + Sbjct: 226 NMLGRPGEGLKIALANLEGGRIGIAAQSAGIARAAFEAARVYANDRQQFGTAIIKHQSVA 285 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +AD+ I AA L A K EA+ A K + ++A V + A+ Sbjct: 286 NMLADMHTKINAARHLVHHAARLRTLGKPCLSEASQA-------KLYASEIAEQVCSAAI 338 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGS 446 + GG G++ + + RHYR++ I G+ Sbjct: 339 QIHGGYGFLNDYPVERHYRDARITQIYEGT 368 >gi|254705458|ref|ZP_05167286.1| acyl-CoA dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261312865|ref|ZP_05952062.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261301891|gb|EEY05388.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M163/99/10] Length = 376 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 23/245 (9%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR----VGCF 256 LTE G+D A+ + ++ D Y ++G K F++ +P++ F ++A+ G + F Sbjct: 124 LTEPDVGSDAGAVRTTAERDRDS-YIINGTKRFITNAPVAGVFTLMARTGGSGPSGISAF 182 Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMK 313 LV R L GL +K+G R T ++ N ++G + G MK Sbjct: 183 LVERDLP-----GLTVGTPDHKMGQRGTQTCDVYLENVRVPATSIIGGVE-GRGFKTAMK 236 Query: 314 ILIYLDSAIMSVSGMRVS--LAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 +L I SV + E++ +A R G + + +++ +AD++ + A Sbjct: 237 VLNRGRLHISSVCAGTAERLIEESVGFAGSRVQFGKRIAEHQMIQAMLADMSTEAYAGRC 296 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 + A +FDE+ A + K +C +M V A++ GGSGY++ + Sbjct: 297 MVLDAARAFDESNVDIIRKAAS------CKLFCSEMVGRVADNAVQIHGGSGYMQNYPVE 350 Query: 432 RHYRE 436 YR+ Sbjct: 351 HFYRD 355 >gi|170698594|ref|ZP_02889663.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] gi|170136528|gb|EDT04787.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria IOP40-10] Length = 393 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 19/257 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGD-CYVLNGTKMWITNGPDCDTLVVYAKTDLDAGPRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN +K+L Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPEENILGQLNCG------VKVL 241 Query: 316 IY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + LD +SG M L + Y R G + + +++ +AD+ A Sbjct: 242 MSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQSIGEFQLIQGKVADMYTTFQAC 301 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A + + D A S + R + + A + EA++ +GG+GYI E Sbjct: 302 RAYLYAVGRHLDSAGS--DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYP 359 Query: 430 IARHYRESPANSILLGS 446 + R +R++ I G+ Sbjct: 360 VGRLWRDAKLYEIGAGT 376 >gi|15598085|ref|NP_251579.1| citronellyl-CoA dehydrogenase involved in catabolism of citronellol [Pseudomonas aeruginosa PAO1] gi|107102438|ref|ZP_01366356.1| hypothetical protein PaerPA_01003500 [Pseudomonas aeruginosa PACS2] gi|116050892|ref|YP_790285.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218890912|ref|YP_002439778.1| putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol [Pseudomonas aeruginosa LESB58] gi|254235876|ref|ZP_04929199.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719] gi|254241554|ref|ZP_04934876.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192] gi|296388624|ref|ZP_06878099.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAb1] gi|9948980|gb|AAG06277.1|AE004715_3 putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol [Pseudomonas aeruginosa PAO1] gi|115586113|gb|ABJ12128.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167807|gb|EAZ53318.1| hypothetical protein PACG_01819 [Pseudomonas aeruginosa C3719] gi|126194932|gb|EAZ58995.1| hypothetical protein PA2G_02254 [Pseudomonas aeruginosa 2192] gi|218771137|emb|CAW26902.1| putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol [Pseudomonas aeruginosa LESB58] Length = 386 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 14/264 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ G+ +K+G RS+ T ++ F N + + G M++L + Sbjct: 182 SLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 240 Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + G+ + I Y + R G LID V+ +A++ ++ A AL + Sbjct: 241 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 300 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + + + A+ A++ A ++ V ++ GG G++ + ++R Y Sbjct: 301 QATELYVKGRDVTRLASMAKLKAG-------RLGREVSDACLQYWGGMGFMWDNPVSRAY 353 Query: 435 RESPANSILLGSGNAMVLDVLNLL 458 R++ SI G+ M+ + L+ Sbjct: 354 RDTRLVSIGGGADEIMLGIICKLM 377 >gi|207727712|ref|YP_002256106.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206590953|emb|CAQ56565.1| acyl coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 376 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ + + LTE G+D AA+ + + D + L+G K F++S +D I++A Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G FLVP S G RL++K+G S+ T ++ F + LLG Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG 224 Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AQGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A I A + + A+ D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNA-------SEMAERVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|162455908|ref|YP_001618275.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] gi|161166490|emb|CAN97795.1| Acyl-CoA dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 575 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 60/277 (21%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQV----EGR- 252 LTE G+D AAI ++ + +DG Y L+G K W + +D F + A+ EG+ Sbjct: 149 FALTEPGAGSDAAAIRTRAELSADGSYYTLNGSKIWITNGGFADVFTVFARTSALEEGKK 208 Query: 253 --VGCFLVPRLLEDGS-PNGLCYQRLKNKIGNRSNATVELEFSNTF------------GF 297 + F+V R + S PN + K+G R ++T EL F + GF Sbjct: 209 PKLTAFIVERSMGVKSGPN-------EQKLGIRGSSTTELFFDDVKVPRENVLGEVGKGF 261 Query: 298 LL-------GDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILI 350 + G L +S G V LI + A+ + R G + Sbjct: 262 KVAVEVLNNGRLGLSAGCVGACNTLIRM----------------ALDRVQERRAFGRSIG 305 Query: 351 DQPVMKRAIADIALDIAAATALSFRLANSFD-EAKSRSEEAAYARIMAPITKYWCCKMAP 409 D ++K IA + A ++++ A+ D + S E+A ++M T ++ Sbjct: 306 DFGLIKDKIATMLAHTYALESITYLTASLVDAKVPDFSIESAICKVMGSETLWF------ 359 Query: 410 AVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 V+ E ++ G GY+EE RH R++ N I G+ Sbjct: 360 -VVNETLQIAAGIGYMEEYPYERHLRDARINMIFEGT 395 >gi|109123600|ref|XP_001110300.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 1 [Macaca mulatta] Length = 428 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GLTE G+D +++ ++ + S+ Y L+G K W +SPM+D F++ A+ E GC + Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310 LLE G GL R++ K R++AT VE+ N +L + GP Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN----MLPGASSLGGPFG 288 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + Y + ++ S L A YA R G L ++++ +AD+ +I Sbjct: 289 CLNNARYGIAWGVLGAS--EFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLG 346 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +L D+ K+ E M + K C A + +A + +GG+G +E Sbjct: 347 LHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 399 Query: 430 IARH 433 + RH Sbjct: 400 VIRH 403 >gi|109123598|ref|XP_001110430.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 3 [Macaca mulatta] Length = 438 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQ-KISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFL 257 GLTE G+D +++ ++ + S+ Y L+G K W +SPM+D F++ A+ E GC + Sbjct: 177 FGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED--GC-I 233 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNAT-------VELEFSNTFGFLLGDLNVSTGPVE 310 LLE G GL R++ K R++AT VE+ N +L + GP Sbjct: 234 RGFLLEKGM-RGLSAPRIQGKFSLRASATGMIIMDGVEVPEEN----MLPGASSLGGPFG 288 Query: 311 DMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 + Y + ++ S L A YA R G L ++++ +AD+ +I Sbjct: 289 CLNNARYGIAWGVLGAS--EFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLG 346 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 +L D+ K+ E M + K C A + +A + +GG+G +E Sbjct: 347 LHACLQLGRLKDQDKAAPE-------MVSLLKRNNCGKALDIARQARDMLGGNGISDEYH 399 Query: 430 IARH 433 + RH Sbjct: 400 VIRH 403 >gi|326383715|ref|ZP_08205400.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197479|gb|EGD54668.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 382 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 35/256 (13%) Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR---- 252 G GLTE G+D A + ++ D + ++G K F+++ +D + + + V G+ Sbjct: 120 GFGLTEPGAGSDAGATATTAREDGD-EWVINGGKQFITNSGTDITSLVTVTAVTGQRDNG 178 Query: 253 ---VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVST 306 + +VP G+P G + NK+G ++ T L F + LLG+ Sbjct: 179 RKEISTIIVP----SGTP-GFTAEPAYNKVGWNASDTHPLSFDDARVPRENLLGERGRGY 233 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIAD 361 L LD ++++G+ +A E+I YAR R G + + + AIA Sbjct: 234 A-----NFLSILDEGRIAIAGLATGVAQGCVDESIKYARERKSFGKAIAEFQSVSFAIAR 288 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 + A + A + +EAA A++++ +MA + GG Sbjct: 289 MEARAHVARMAYYDAAAKMLAGQPFKKEAAIAKMVSSEAAMDNARMA-------TQIHGG 341 Query: 422 SGYIEERSIARHYRES 437 G++ E +ARHYR+S Sbjct: 342 YGFMNEYPVARHYRDS 357 >gi|311108128|ref|YP_003980981.1| acyl-CoA dehydrogenase [Achromobacter xylosoxidans A8] gi|310762817|gb|ADP18266.1| acyl-CoA dehydrogenase, N-terminal domain protein 18 [Achromobacter xylosoxidans A8] Length = 388 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 33/263 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 L+E G+D+A I+ + + D + ++G K++ + FI+ V R + P+ Sbjct: 123 LSEPNAGSDVANISCRAVRDGDD-WLITGSKYWCTFADDADFIL---VICRSDPVVDPQA 178 Query: 262 LEDG-------SPNGLCYQRLKN----KIGNRSNATVELEFSNT---FGFLLGD----LN 303 G P G + ++ KIG T EL F N ++GD Sbjct: 179 RHKGLSAFMIEKPRGELPEGVQGSVIPKIGYHGWTTWELAFDNCRVPHSAMVGDEGKAFY 238 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 ++ +E + +A S+ + SL ++I YA++R G + D ++ IAD+A Sbjct: 239 LACAGLETARA----HTAARSIGLAQGSLEDSIQYAKQRAQFGRPIADFQAIRFKIADMA 294 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 I A+ AL + + D EA+ +++A +M+ V +E ++ GG+G Sbjct: 295 TQIEASRALLYAVCEKIDRGVRTDTEASMVKLLA-------SEMSERVTSEGLQVHGGAG 347 Query: 424 YIEERSIARHYRESPANSILLGS 446 Y + R++R++ I G+ Sbjct: 348 YTTHCAAERYWRDARLTKIFEGT 370 >gi|228915676|ref|ZP_04079262.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843962|gb|EEM89025.1| Acyl-CoA dehydrogenase, short-chain specific [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 395 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 31/240 (12%) Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGR--VGCFLVPRLL 262 RGG QG+K + ++G K F + +P+ D FI+ A +EGR VG F++PR Sbjct: 149 RGGKPETIAVQQGEK-----WIINGRKTFTTMAPVLDYFIISASMEGREEVGEFVIPR-- 201 Query: 263 EDGSPNGLCYQRLKNKIGNRSNATVEL-----EFSNTFGFLLGDLNVSTGPVEDMKI--L 315 + G+ + + + R A+ +L E N F +V G V+ + L Sbjct: 202 ---NTLGVSIEETWDSVAMRGTASHDLVLQNVEIENRFF-----TDVKGGKVKQKGVGWL 253 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 +Y+ + + ++ + A + + + + P ++R + ++ L++ A ++ Sbjct: 254 LYIPACYLGIAQSARNYAVQFAGSYKPNSLNHSISLLPNVRRLVGELELELMQARVFLYQ 313 Query: 376 LANSFDEAKSR-SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 +A +DEA+ + S +A A + KY A +++ ++M +G E+ + R+Y Sbjct: 314 IAKKYDEAEDKLSLQAELAAV-----KYAVTNAAISIVDKSMRIVGAKSLSEKNPLHRYY 368 >gi|254238903|ref|ZP_04932226.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719] gi|254244753|ref|ZP_04938075.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192] gi|126170834|gb|EAZ56345.1| hypothetical protein PACG_05071 [Pseudomonas aeruginosa C3719] gi|126198131|gb|EAZ62194.1| hypothetical protein PA2G_05625 [Pseudomonas aeruginosa 2192] Length = 381 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 127 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 184 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 + + + G + K+G ++ T EL F + F +L+ +L Sbjct: 185 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 243 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + I +++ +L + Y R R G + D + +A++A Sbjct: 244 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 293 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA + KYW + V+ E ++ GG G Sbjct: 294 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 346 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E +AR + ++ I G+ M Sbjct: 347 FMWEYPVARAWADARVQRIYAGTNEIM 373 >gi|194363998|ref|YP_002026608.1| acyl-CoA dehydrogenase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194346802|gb|ACF49925.1| acyl-CoA dehydrogenase domain protein [Stenotrophomonas maltophilia R551-3] Length = 388 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 18/256 (7%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPRL 261 LTE G+D A++ + + D Y L+G K F+S + +++ G G V + Sbjct: 128 LTEPGAGSDAASLKTTAVRDGD-FYVLNGSKAFISGAGATELLVVMARTGGAGAGGVSAI 186 Query: 262 LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT-------FGFLLGDLNVSTGPVEDMKI 314 G+ + R + K+G S T + F N G G ++ ++ +I Sbjct: 187 AVPADLPGISFGRKEEKMGWNSQPTRGITFENVRVPVSHLLGEEGGGFKLAMKGLDGGRI 246 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 I A S+ + +L A Y R G L + ++ +AD+A+++ AA + Sbjct: 247 NI----AACSLGAAQGALDAARRYMGERRQFGKTLSEFQALQFKLADMAIELVAARQMVH 302 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 A D S A + + K + + EA++ GG GYI E I R Sbjct: 303 TAARKLDAGASD------ANVWCAMAKRFATDAGFNICNEALQIHGGYGYIREYPIERLL 356 Query: 435 RESPANSILLGSGNAM 450 R+S + IL G+ M Sbjct: 357 RDSRVHQILEGTNEIM 372 >gi|160896146|ref|YP_001561728.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gi|160361730|gb|ABX33343.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 380 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 14/256 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLV 258 + +TE G+D+ ++ + ++ D Y L+G K F+++ + S+ I++A+ +G V Sbjct: 126 IAMTEPGAGSDLKSVRTTARREGDH-YVLNGQKTFITNGINSELVIVVAKTAPEMGAKGV 184 Query: 259 PRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 ++ EDG P G R KIG + T EL F N LLG+ N + Sbjct: 185 SLIVVEDGMP-GFSKGRKLEKIGLMAQDTSELFFDNVRVPADHLLGEENAGFRYLMHELA 243 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 L A+ + + + L + I Y R R G QPV + +A A A + Sbjct: 244 QERLVVAVRAAASIEAFLHKTIAYTRERKAFG-----QPVFD--FQNTRFKLAEAKAQAT 296 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 L D+ + A A A + K + ++ E ++ GG GY+ E I R + Sbjct: 297 MLRVFVDDCIALHLRRALAPDRAAMVKLNATALQNRLLDEFLQLHGGYGYMTEYQIGRAW 356 Query: 435 RESPANSILLGSGNAM 450 ++ I GS M Sbjct: 357 TDARIGRIYGGSDEIM 372 >gi|17987804|ref|NP_540438.1| acyl-COA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|225851948|ref|YP_002732181.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis ATCC 23457] gi|256044131|ref|ZP_05447038.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256112935|ref|ZP_05453843.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis bv. 3 str. Ether] gi|256264542|ref|ZP_05467074.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260563488|ref|ZP_05833974.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265990542|ref|ZP_06103099.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994371|ref|ZP_06106928.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|17983530|gb|AAL52702.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|225640313|gb|ACO00227.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis ATCC 23457] gi|260153504|gb|EEW88596.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|262765484|gb|EEZ11273.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263001326|gb|EEZ13901.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094875|gb|EEZ18613.1| acyl-CoA dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326408445|gb|ADZ65510.1| acyl-CoA dehydrogenase domain-containing protein [Brucella melitensis M28] gi|326538161|gb|ADZ86376.1| acyl-CoA dehydrogenase domain protein [Brucella melitensis M5-90] Length = 592 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|54025795|ref|YP_120037.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54017303|dbj|BAD58673.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length = 381 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 31/284 (10%) Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKW 233 W PK S E + + +TE G+D+ I ++ + D + L+G K Sbjct: 111 WLPKFCSGE-------------LITAIAMTEPGTGSDLQGIKTRAVRDGDD-WILNGAKT 156 Query: 234 FLSSPM-SDAFIMLAQVEGRVGCFLVPRLL-EDGSPNGLCYQRLKNKIGNRSNATVELEF 291 F+++ + +D I++AQ + G L+ E G P G R +KIG ++ T EL F Sbjct: 157 FITNGINADLVIVVAQTDPEKGAMGFSLLVVERGMP-GFERGRNLDKIGLKAQDTAELSF 215 Query: 292 SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVS-----LAEAIHYARRRHVSG 346 ++ + G + T + + ++ L MS++ M + L Y R R G Sbjct: 216 TDV--RVPGKNLLGTEGMGFIHLMQNLPQERMSIAVMAAAAMEACLDMTCQYVRDRKAFG 273 Query: 347 GILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCK 406 + + +A++A A + R + K +E+AA A K+W + Sbjct: 274 KPIGALQNTRFVLAELATKTTAVRIMVDRFIEDLNAGKLSAEDAAMA-------KWWSTE 326 Query: 407 MAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 +I ++ GG GY+ E IA+ Y ++ +I G+ M Sbjct: 327 EQLDLINRCLQLHGGYGYMREYPIAKAYTDARIQTIYGGTTEIM 370 >gi|152985463|ref|YP_001350343.1| acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] gi|150960621|gb|ABR82646.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PA7] Length = 378 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 124 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 181 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 + + + G + K+G ++ T EL F + F +L+ +L Sbjct: 182 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 240 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + I +++ +L + Y R R G + D + +A++A Sbjct: 241 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 290 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA + KYW + V+ E ++ GG G Sbjct: 291 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 343 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E +AR + ++ I G+ M Sbjct: 344 FMWEYPVARAWADARVQRIYAGTNEIM 370 >gi|332973086|gb|EGK11021.1| acyl-CoA dehydrogenase [Desmospora sp. 8437] Length = 591 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 38/349 (10%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIF--SREYDPTNKAPMQKTSVAIGLGLTEKRGG 208 L++ + A AL V P +F ++E P+ LTE G Sbjct: 95 LITEKIAPARSFALSHGAHVGIGTLPIVFFGNKEQKEKYLPPLASGEKFAAYALTEPGSG 154 Query: 209 TDIAAITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEG-RVGCFLVPRLLEDG 265 +D + + DG Y L+G K W +S +D F++ A+V+G + F+V + Sbjct: 155 SDALGAKTVAKLSEDGKHYILTGEKQWITNSAFADVFVVYAKVDGEKFTAFIVEKEF--- 211 Query: 266 SPNGLCYQRLKNKIGNRSNATVEL---EFSNTFGFLLGDLNVSTGPVEDMKILIY--LDS 320 G+ + K+G + ++T L E +LG+ V G + IL Sbjct: 212 --PGVSTGPEEKKMGIKGSSTRTLILDEARVPVENVLGE--VGKGHLIAFNILNIGRYKL 267 Query: 321 AIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSF 380 + V + ++ + YA+ R + P+++ +A ++ A ++ +RLA F Sbjct: 268 GVGCVGSSKRAIEISAKYAKERKQFKTPIAQFPLIQEKLATMSAKTYALESVIYRLAGFF 327 Query: 381 DEAKSRSEEAAYARIMAPITKYWC-CKMAPA--------VIAEAMECIGGSGYIEERSIA 431 ++ + E+A I +Y C +A V+ E ++ GG G+++E I Sbjct: 328 EKGLAHLEQAEGTEAAKAIAEYALECSIAKVFGSEVLDYVVDEGVQIHGGYGFMQEYEIE 387 Query: 432 RHYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQL 468 YR+S N I G+ L + L LEK L E+L Sbjct: 388 NMYRDSRINRIFEGTNEINRLLIPSTLMRKTMKGELPFLEKAAGLQEEL 436 >gi|312140989|ref|YP_004008325.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311890328|emb|CBH49646.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length = 380 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLV 258 L +TE GG+D+ + + I DG Y ++G K F++S + F++ A G G V Sbjct: 122 LAITEPGGGSDVGHLRTT--AIRDGDHYVVNGAKTFITSAVRADFVVTAVRTGGPGAGGV 179 Query: 259 PRL-LEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 L +E G+P G R +K+G R++ T EL F + L+G+ N + + Sbjct: 180 SLLVIEKGTP-GFEVARKLDKMGWRASDTAELSFVDARVPVENLVGEENSGFAQIAQAFL 238 Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + A + + + L + + R R G LI + ++ + ++ + A + Sbjct: 239 TERIALAAQAYASAQRCLDLTLQWCRDRETFGRPLISRQAVQNTVTEMTRRVDVARVYTR 298 Query: 375 RLAN-SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433 L S + E +A+ A W V +A++ GG GY+ E + R Sbjct: 299 TLVERSLVSNEDFVAEVCFAKNTAVEAGEW-------VANQAVQLFGGMGYMAESEVERQ 351 Query: 434 YRESPANSILLGSGNAMVLDVL 455 YR+ + +G G +L L Sbjct: 352 YRD--MRILGIGGGTTEILTSL 371 >gi|300705373|ref|YP_003746976.1| acyl CoA dehydrogenase oxidoreductase protein [Ralstonia solanacearum CFBP2957] gi|299073037|emb|CBJ44394.1| putative acyl CoA dehydrogenase oxidoreductase protein [Ralstonia solanacearum CFBP2957] Length = 376 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQ 248 P+ + + LTE G+D AA+ + + D + L+G K F++S +D I++A Sbjct: 111 PLARGEMLGAFCLTEPHVGSDAAALRTTATRDGDH-WVLNGVKQFITSGKHADVAIVMAV 169 Query: 249 VEGRVG-----CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLG 300 + G FLVP S G RL++K+G S+ T ++ F + LLG Sbjct: 170 TDKAAGKRGISAFLVPT-----STPGYIVARLEDKLGQHSSDTAQIVFEDCRIPADGLLG 224 Query: 301 ----DLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMK 356 ++ +E +I I A SV R + A+ YA+ R G L ++ Sbjct: 225 AQGEGYRMALSGLEGGRIGI----AAQSVGMARAAFEAALAYAKERESFGQPLFAHQAVQ 280 Query: 357 RAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 +A++A I A + + A+ D + +EAA A++ A +MA V ++A+ Sbjct: 281 FRLAEMATRIDVARQMVWHAASLKDAGRPCLKEAAMAKLNA-------SEMAEHVCSDAI 333 Query: 417 ECIGGSGYIEERSIARHYRESPANSILLGSGN 448 + GG GY+ + + R YR+ I G+ + Sbjct: 334 QVFGGYGYVSDFPVERIYRDVRVCQIYEGTSD 365 >gi|325676129|ref|ZP_08155810.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553039|gb|EGD22720.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length = 388 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 24/259 (9%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEG-----RVG 254 + LTE GG+D+ A+T+ ++ D + W ++ S +L + + G Sbjct: 126 MALTEPGGGSDLQAMTTAARQDGDDLVVTGAKTWISNARRSGLIALLCKTDPAAQPRHTG 185 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSN---TFGFLLGDLNVSTGPVED 311 +V L+E G GL R K+G + T EL F +LG G + Sbjct: 186 VSVV--LVEHGP--GLTVSRDLPKLGYKGVETCELSFDGYRVPATAILGG-TPGKGFAQM 240 Query: 312 MKILIY--LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 MK L L A ++ +L +++ YAR+R G + + +AD+A + AA Sbjct: 241 MKGLETGRLQVAARALGVGAAALEDSLAYARQRETFGVPIHKHQSIGNYLADMATKLTAA 300 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L+ A +D EA A++ A T A + +A+ GG GY E Sbjct: 301 RQLTRYAAERYDRGDRCDMEAGMAKLFASET-------AMEIALDAVRIHGGYGYSTEYD 353 Query: 430 IARHYRESPANSILLGSGN 448 + R+ R++P +++G G Sbjct: 354 VERYLRDAPL--MIVGEGT 370 >gi|239927853|ref|ZP_04684806.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291436194|ref|ZP_06575584.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291339089|gb|EFE66045.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 401 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 45/280 (16%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML------AQVEGRVGCFLVPRL 261 G+D++AITS+ K D Y LSG K +L++ + + + + EG + Sbjct: 135 GSDVSAITSKAVKDGD-EYVLSGQKMWLTNGGTSSLVAVLVRSDEGHPEGTAPHKSMTTF 193 Query: 262 LEDGSPN------GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVST----GPVED 311 L + P GL +K+G + T EL ++ L V G V Sbjct: 194 LVEKEPGFGEVRPGLTIPGKIDKMGYKGVDTTEL--------IMDGLRVPADRVLGGVTG 245 Query: 312 MKILIYLDS---AIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIA 363 +D ++V+ +A+ + YA++RH G + ++ +A++A Sbjct: 246 RGFYHMMDGVEVGRVNVAARGCGVAQRAFELGVRYAQQRHTFGKPIAQHQAIQFKLAEMA 305 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 + AA A+ A D + EA A KY + V+ ++ GG G Sbjct: 306 TKVEAAHAMMVNAARKKDSGERNDLEAGMA-------KYLASEYCKEVVEDSFRIHGGYG 358 Query: 424 YIEERSIARHYRESPANSILLGSGNAMVLDVL---NLLEK 460 + +E I R YRE+P +L+G G A + ++ LLE+ Sbjct: 359 FSKEYEIERLYREAPM--LLIGEGTAEIQKMIIGRRLLEE 396 >gi|196040454|ref|ZP_03107754.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] gi|196028586|gb|EDX67193.1| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99] Length = 594 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 49/357 (13%) Query: 155 SVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDIAA 213 ++T + V + + P V +F E P+ T + LTE G+D Sbjct: 109 AITHGAHVGIGSLPIV-------LFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALG 161 Query: 214 ITSQGQKISDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGL 270 + + ++G Y L+G K W +S +D FI+ A+++G F+V + G+ Sbjct: 162 AKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEK-----DYAGV 216 Query: 271 CYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY--LDSAIMSV 325 + K+G + ++T L + LLG+ + G + IL + +V Sbjct: 217 STSPEEKKMGIKCSSTRTLILEDALVPKENLLGE--IGKGHIIAFNILNIGRYKLGVGTV 274 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + ++ + YA +R + P+++ +A++A AA + +R F+ S Sbjct: 275 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMS 334 Query: 386 R-SEE------------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 SEE A YA I + K + ++ + E ++ GG G++ E I R Sbjct: 335 TLSEEEVKDGKAVAASIAEYA-IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIER 393 Query: 433 HYRESPANSILLGSGNAMVLDV------------LNLLEKGTNLFEQLFSTLEQDLG 477 YR+S N I G+ L V L LL+K L E+L + ++G Sbjct: 394 MYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMMPGEVG 450 >gi|256060548|ref|ZP_05450716.1| Acyl-CoA dehydrogenase [Brucella neotomae 5K33] gi|261324543|ref|ZP_05963740.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] gi|261300523|gb|EEY04020.1| acyl-CoA dehydrogenase domain-containing protein [Brucella neotomae 5K33] Length = 592 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDASVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|148558944|ref|YP_001258435.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] gi|148370201|gb|ABQ60180.1| acyl-CoA dehydrogenase family protein [Brucella ovis ATCC 25840] Length = 592 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|125978166|ref|XP_001353116.1| GA19744 [Drosophila pseudoobscura pseudoobscura] gi|195173458|ref|XP_002027508.1| GL10298 [Drosophila persimilis] gi|54641867|gb|EAL30617.1| GA19744 [Drosophila pseudoobscura pseudoobscura] gi|194114409|gb|EDW36452.1| GL10298 [Drosophila persimilis] Length = 420 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 53/299 (17%) Query: 167 TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIY 226 TP + + PK+ + E+ GL ++E G+D+ ++ + ++ D Y Sbjct: 139 TPEQKEQYLPKLCNGEH-------------IGGLAMSEPGAGSDVVSMKLRAERKGD-YY 184 Query: 227 CLSGHK-WFLSSPMSDAFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQRLKNK 278 L+G K W + +D I+ A+ G + F+V E G Q+L +K Sbjct: 185 VLNGSKFWITNGSDADTLIVYAKTGGSGVADKHGITAFIV----ETGWEGFSVAQKL-DK 239 Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPV---EDMKILIYLDS--------AIMSVSG 327 +G R ++T EL F DL V + E+ + + + A V Sbjct: 240 LGMRGSSTCELVFQ--------DLKVPAKNILGKENKGVYVLMSGLDFERLVLAAGPVGL 291 Query: 328 MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRS 387 M+ + A YA +R ++ + +++ +AD+ ++A + + +A S D A +RS Sbjct: 292 MQAACDVAFDYAHQRKQMSQLIGEFQLVQGKMADMYSTLSACRSYLYTVARSSD-AGNRS 350 Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446 + I+ +C + A V +A++ +GG+GYI + R R++ I G+ Sbjct: 351 PKDCAGVIL------YCAEKATQVALDAIQILGGNGYINDNPTGRILRDAKLYEIGAGT 403 >gi|110637812|ref|YP_678019.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406] gi|110280493|gb|ABG58679.1| acyl-CoA dehydrogenase [Cytophaga hutchinsonii ATCC 33406] Length = 392 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 29/244 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-GRVGCFL 257 GLTE G++ A + + + D Y L+G K W +SP +D ++ A+ + GR+ + Sbjct: 136 FGLTEPDHGSNPAGMVTSIKDAGDH-YILNGAKMWITNSPKADIAVVWAKDDAGRIKGII 194 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKI 314 V R +E G + NK R++ T EL F N +L + +GP++ Sbjct: 195 VERGME-----GFTTPEIHNKWSLRASITGELVFDNVKVPKTHVLPKADGLSGPLK---- 245 Query: 315 LIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 LDSA ++ + A A +YA R G + + ++ +A++ +I A Sbjct: 246 --CLDSARYGIAWGALGAAMECYDIAKNYAMERVQFGKPIAGFQLTQKKLAEMLTEITKA 303 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 L +RL +E K+ + + + A K MA V EA + +GG G E Sbjct: 304 QLLVWRLGMLKNEGKASTGQVSMA-------KRNNVDMALKVAREARQILGGMGITGEYP 356 Query: 430 IARH 433 I RH Sbjct: 357 IMRH 360 >gi|327481927|gb|AEA85237.1| isovaleryl-CoA dehydrogenase [Pseudomonas stutzeri DSM 4166] Length = 387 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 22/308 (7%) Query: 150 HLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKA---PMQKTSVAIG-LGLTEK 205 H+++ S ++ + H + +R +P KA P +G L ++E Sbjct: 74 HVVAMEEISRGSASVALSYGAHSNLCVNQINRNGNPEQKARYLPKLIRGEHVGALAMSEP 133 Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLVPRLLED 264 G+D+ ++ + +K D Y L+G K W + P ++ +++ A+ + G + + + Sbjct: 134 NAGSDVVSMKLRAEKRGD-RYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVE 192 Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIY-LDSAIM 323 G +K+G R + T EL F + L V G V K+L+ LD + Sbjct: 193 RDWKGFSRGNKFDKLGMRGSNTCELFFDDVEVPEENVLGVENGGV---KVLMSGLDYERV 249 Query: 324 SVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLAN 378 ++G M+ L + Y R G + + ++ +AD+ + A+ A + +A Sbjct: 250 VLAGGPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNASRAYLYAVAQ 309 Query: 379 SFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESP 438 + D ++ ++AA + + + A + +A++ +GG+GYI E R R++ Sbjct: 310 ACDRGETTRKDAAGVIL-------YTAENATQMALQAIQILGGNGYINEFPTGRLLRDAK 362 Query: 439 ANSILLGS 446 I G+ Sbjct: 363 LYEIGAGT 370 >gi|294629478|ref|ZP_06708038.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14] gi|292832811|gb|EFF91160.1| long-chain specific acyl-CoA dehydrogenase [Streptomyces sp. e14] Length = 385 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 39/271 (14%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSPM-SDAFIMLAQVEGRVG--- 254 + +TE G+D+A + + + DG Y L+G K F++ + +D I+ A+ Sbjct: 124 IAMTEPGTGSDLAGMKTTAKLSEDGTHYVLNGAKTFITGGVHADKVIVCARTSAPTAEDR 183 Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDM-- 312 F + D G R +K+G R++ T EL F D+ V P ED+ Sbjct: 184 RFGISLFAVDTKSEGYSVGRKLDKLGLRTSDTAELAFV--------DVKV---PAEDLLG 232 Query: 313 ---KILIYLDSAIMS-----VSGMRVSLAEAIHYARRRHVSGGILIDQPV-----MKRAI 359 K YL + S G A+ +A++ +V + +PV K + Sbjct: 233 EENKGFYYLGHNLASERWGIAFGAYAQAKAAVRFAKQ-YVQERTVFGKPVAHFQNTKFEL 291 Query: 360 ADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419 A ++ AA A++ R + D + EAA A++ +C ++A VI ++ Sbjct: 292 AACQAEVDAAEAVADRATEALDAGELTPAEAASAKL-------FCTEVAHRVIDRCLQLH 344 Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAM 450 GG GY+ E IAR Y ++ N I G+ M Sbjct: 345 GGYGYMNEYPIARLYADNRVNRIYGGTSEIM 375 >gi|163793494|ref|ZP_02187469.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199] gi|159181296|gb|EDP65811.1| putative acyl-CoA dehydrogenase [alpha proteobacterium BAL199] Length = 386 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 22/245 (8%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRV-GCFLVP 259 LTE G+D A+I + +K +G + L+G K F++ S + ++A+ + G + Sbjct: 124 LTEPEAGSDAASIRTSARKDGNG-WILNGTKRFITNSRRAGVLTVMARSDPDAPGSSGIS 182 Query: 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILI 316 L D G+ Y + K+G + ++ F + ++G + G MK+L Sbjct: 183 AFLVDAKTPGISYGQPYRKMGQQGTHVADVIFEDARVPADAVIGGVE-GRGFKTAMKVL- 240 Query: 317 YLDSAIMSVSGMRVSLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATA 371 D + +S + V +A E++ YA R G L D +++ +AD ++ AA + Sbjct: 241 --DRGRIHLSAVCVGIAQRLIEESLRYATDRQQFGSRLADFQLVQAMLADSQTEMYAARS 298 Query: 372 LSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIA 431 ++ A + EAA KY+ +M V A++ GG+GY+ + ++ Sbjct: 299 MTLDAATLYATEGKAPMEAA-------CCKYYASEMVGRVADRAVQIHGGAGYMADYAVE 351 Query: 432 RHYRE 436 R YR+ Sbjct: 352 RFYRD 356 >gi|72162048|ref|YP_289705.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] gi|71915780|gb|AAZ55682.1| acyl-CoA dehydrogenase [Thermobifida fusca YX] Length = 385 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 26/258 (10%) Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVE-----GR-V 253 GL+E+ G+D A++ ++ + D + L+G K W ++ +S + ++A + GR + Sbjct: 127 GLSEREAGSDTASMRTRAVRDGDD-WILNGQKSWITNAGISKYYTVMAVTDPDGPRGRNI 185 Query: 254 GCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK 313 F+V ++D G + + K+G + + T EL F N + GD V Sbjct: 186 SAFVVH--IDD---PGFSFGEPERKLGIKGSPTRELIFDNVR--IPGDRLVGKVGEGLRT 238 Query: 314 ILIYLDSAIMSVSGMRVSLAE-----AIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 L LD +++ V +A+ A+ Y + R G + D ++ +AD+A+ + A Sbjct: 239 ALRTLDHTRVTIGAQAVGIAQGALDYALGYVKERKQFGKAIADFQGIQFMLADMAMKLEA 298 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A + + A AKS ++A + K + +A + +A++ +GG GY + Sbjct: 299 ARQMVYVAA-----AKSERDDADLS-FYGAAAKCFASDVAMEITTDAVQLLGGYGYTRDY 352 Query: 429 SIARHYRESPANSILLGS 446 + R R++ I G+ Sbjct: 353 PVERMMRDAKITQIYEGT 370 >gi|225175702|ref|ZP_03729695.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168626|gb|EEG77427.1| acyl-CoA dehydrogenase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 379 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 36/319 (11%) Query: 153 SPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIG-LGLTEKRGGTDI 211 S +T A+ ++ T P +F E P+ + A GLTE G+D Sbjct: 82 STGITYAAHCSIGTGPIY-------LFGTEEQKKKWVPLCASGKAFAAFGLTEPNAGSD- 133 Query: 212 AAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDG 265 A T + + L+G K F+++ ++ V R + F+VP Sbjct: 134 AGGTQTTAVLEGDEWVLNGSKCFITNVGVGKVAVITAVTDRSKGTRGISSFIVPT----- 188 Query: 266 SPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMK-ILIYLDSAIMS 324 G + +K+G +++ T E+ N + N+ E K L+ LD +S Sbjct: 189 DTPGFSVGQPYDKMGLKASDTREIILENV---RIPKENLLGNQDEGFKQFLVALDGGRIS 245 Query: 325 VSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANS 379 + + V +A+A + YA+ R G + ++ +AD+ + A + ++ A Sbjct: 246 IGALSVGIAQACLDAALKYAKEREQFGQPISKFQAIQFKLADMKMKTELARLMVYKAAWL 305 Query: 380 FDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPA 439 D+ + S EAA ++ A T C + A +EA++ GG GY++E + R+ R++ Sbjct: 306 KDQGQPFSMEAAIGKLYASET---CMQNA----SEAVQIHGGYGYMKEYPVERYLRDAKL 358 Query: 440 NSILLGSGNAMVLDVLNLL 458 I G+ L + LL Sbjct: 359 MEIGEGTSEVQRLVIARLL 377 >gi|218893526|ref|YP_002442395.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] gi|218773754|emb|CAW29568.1| probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 381 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 36/267 (13%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGI-YCLSGHKWFLSSP-MSDAFIMLAQVEGRVGCFL 257 + +TE G+D+ + + + DG Y ++G K F+++ ++D I++A+ + + G Sbjct: 127 IAMTEPGAGSDLQGVKTTA--VLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKG 184 Query: 258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLN 303 + + + G + K+G ++ T EL F + F +L+ +L Sbjct: 185 ISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQEL- 243 Query: 304 VSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 P E + + I +++ +L + Y R R G + D + +A++A Sbjct: 244 ----PQERLTV------GIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMA 293 Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423 +I R + K AA + KYW + V+ E ++ GG G Sbjct: 294 TEIQVGRVFVDRCMEQHLQGKLDVPTAA-------MCKYWTTDLQCKVLDECVQLHGGYG 346 Query: 424 YIEERSIARHYRESPANSILLGSGNAM 450 ++ E +AR + ++ I G+ M Sbjct: 347 FMWEYPVARAWADARVQRIYAGTNEIM 373 >gi|254476275|ref|ZP_05089661.1| acyl-CoA dehydrogenase [Ruegeria sp. R11] gi|214030518|gb|EEB71353.1| acyl-CoA dehydrogenase [Ruegeria sp. R11] Length = 381 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 34/264 (12%) Query: 202 LTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQV--EGRVGCFLV 258 LTE G+D AA+ ++ K ++G Y L+G K F+S SDA++ + + +G G V Sbjct: 124 LTEPGSGSDAAALKTRAAKTNEG-YTLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTV 182 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT------------FGFLLGDLNVST 306 +EDG+ GL + L++K+G +S T +++F + GF + + Sbjct: 183 --YVEDGTA-GLSFGGLEDKMGWKSQPTAQVQFDDCKIPADNLVGEEGSGFKYAMMGLDG 239 Query: 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDI 366 G L+ A S+ + +L + Y R G + ++ +AD+ +++ Sbjct: 240 G---------RLNIASCSLGAAQQALNMTLQYMSERKAFGKSIDQFQGLQFRLADMEIEL 290 Query: 367 AAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE 426 AA + A D+ + + + K + + ++ + ++ GG GY+ Sbjct: 291 QAARVFLRQAAWKLDQGTPDASK------HCAMAKKFVTEAGSKIVDQCLQLHGGYGYLA 344 Query: 427 ERSIARHYRESPANSILLGSGNAM 450 + I + R+ + IL G+ M Sbjct: 345 DYGIEKLVRDLRVHQILEGTNEIM 368 >gi|254469328|ref|ZP_05082733.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] gi|211961163|gb|EEA96358.1| acyl-CoA dehydrogenase [Pseudovibrio sp. JE062] Length = 404 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 44/316 (13%) Query: 162 VALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKI 221 ++L TP + W NK +T A LTE G+D+A I + I Sbjct: 101 ISLFGTPEQQQQW-----------LNKTRAGQTLSA--FALTEPDSGSDVANI--ELSAI 145 Query: 222 SDGI-YCLSGHK-WFLSSPMSDAFIMLAQVEGRVGC-----FLVPRLLEDGSPNGLCYQR 274 DG Y L+G K W + ++ +++ A+ G F+VP +P +R Sbjct: 146 RDGDDYVLNGEKTWISNGGIAGLYVVFARTGEAPGAKGISAFIVPA----DTPGLTIEER 201 Query: 275 LK----NKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 L + + + + +N G +S ++ + + ++ R Sbjct: 202 LDVMAPHPLARLGFKQLRIPAANRIGGAGEGFKISMSVLDVFRCTV----GAAALGFARR 257 Query: 331 SLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEE 389 +L EA+ A R + G+L D +++ +A++A+DI A+ L +R A + D +R S E Sbjct: 258 ALEEAVARATTRKLGDGVLADMQMVQGHLAEMAIDIDASALLIYRAAWTKDMGAARVSRE 317 Query: 390 AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNA 449 AA A K + A +I +A++ GG G ++ + YRE A I G+ + Sbjct: 318 AAMA-------KQFATDQAQQIIDKAVQIHGGEGVRSGNTVEKLYREIRALRIYEGASDV 370 Query: 450 MVLDVLNLL--EKGTN 463 + V L ++G N Sbjct: 371 QKIIVARQLLSQEGRN 386 >gi|328767161|gb|EGF77212.1| hypothetical protein BATDEDRAFT_17903 [Batrachochytrium dendrobatidis JAM81] Length = 513 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 52/261 (19%) Query: 189 APMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSG-HKWFLSSPMSDAF--- 243 P+ + I L +TE G+D+AAI + K DG Y ++G KW + SD F Sbjct: 231 GPVLRGEKRICLSITEPGAGSDVAAIKTTAVKTPDGKFYIVNGTKKWITNGAQSDYFSTA 290 Query: 244 IMLAQVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLG 300 + G + LV R DG L+ K T++ +S++ G ++ Sbjct: 291 VRTGDGPGGISMLLVER--ADG---------LETK-------TIKTSYSSSAGTSYVIME 332 Query: 301 DLNVSTGPVEDM--------KILIY--------LDSAIMSVSGMRVSLAEAIHYARRRHV 344 +L V PVE++ ++++Y + +I+ S RV + E ++ +R V Sbjct: 333 NLKV---PVENLLGKEGDGFQVIMYNFNHERWVIACSILRSS--RVVVEECFKWSHQRMV 387 Query: 345 SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPIT--KY 402 G LIDQPV++ +A + IA A L N + S + ++ PI K Sbjct: 388 FGKRLIDQPVIRNKLAHM---IAEVEATQNWLENITYQMNKMSYKDQANKLAGPIALLKL 444 Query: 403 WCCKMAPAVIAEAMECIGGSG 423 C ++A + +A + GG G Sbjct: 445 QCTRVAHNISDQACQIFGGRG 465 >gi|207723546|ref|YP_002253945.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206588747|emb|CAQ35710.1| acyl-coa dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 622 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 71/320 (22%) Query: 202 LTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLSS---PMSDAFI--MLAQVEGR 252 L+E + G+ ++ I + +G+ Y L+G+K ++S+ +SD + +LA++ G Sbjct: 164 LSEPQAGSSLSDIVTRAEYEGESPLGPQYRLTGNKMWISAGEHALSDNIVHLVLAKIPGP 223 Query: 253 VG----------CFLVPRLLED-----GSPNGLCYQRLKNKIGNRSNATVELEF------ 291 G F+VP+ L + G N + L +K+G R L F Sbjct: 224 DGKPIPGAKGISLFIVPKFLVNADGSLGERNDVALAGLNHKMGYRGTTNCLLNFGEGTQF 283 Query: 292 ----------SNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLA------EA 335 + G+L+G+ P + + + ++ + GM ++ A Sbjct: 284 RPLGPDGQPRAGAIGYLVGE------PHKGLACMFFMMNEARIGVGMGATMLGYTGYLHA 337 Query: 336 IHYARRR------------HVSGGI-LIDQPVMKRAIADIALDIAAATALSFRLANSFDE 382 + YAR R S I ++D ++R + + A L+ A DE Sbjct: 338 LDYARNRPQGRPAGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDE 397 Query: 383 AKSRSEEAAYAR------IMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRE 436 A+ ++ A AR I+ PI K W + + A++ GG GY E ++ + YR+ Sbjct: 398 ARGETDPAVRARLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRD 457 Query: 437 SPANSILLGSGNAMVLDVLN 456 + N I G+ LD+L Sbjct: 458 NRLNPIHEGTHGIHGLDLLG 477 >gi|31791393|ref|NP_853886.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium bovis AF2122/97] gi|215425420|ref|ZP_03423339.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T92] gi|215433136|ref|ZP_03431055.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054] gi|260199217|ref|ZP_05766708.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis T46] gi|260203360|ref|ZP_05770851.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis K85] gi|289441591|ref|ZP_06431335.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis T46] gi|289572795|ref|ZP_06453022.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85] gi|289748691|ref|ZP_06508069.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92] gi|289756280|ref|ZP_06515658.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054] gi|31616978|emb|CAD93085.1| PROBABLE ACYL-COA DEHYDROGENASE FADE3 [Mycobacterium bovis AF2122/97] gi|289414510|gb|EFD11750.1| probable acyl-coa dehydrogenase fade3 [Mycobacterium tuberculosis T46] gi|289537226|gb|EFD41804.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis K85] gi|289689278|gb|EFD56707.1| acyl-CoA dehydrogenase fadE3 [Mycobacterium tuberculosis T92] gi|289696867|gb|EFD64296.1| acyl-CoA dehydrogenase FADE3 [Mycobacterium tuberculosis EAS054] Length = 388 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 40/286 (13%) Query: 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITS----QGQKISDGIYCLSGHKWFLS 236 R Y P PM + + LTE GG+D+ +++ G + S G+ W + Sbjct: 107 RTYLP----PMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISN 162 Query: 237 SPMSDAFIMLAQVEGRVGCFLVPR-------LLEDGSPNGLCYQRLKNKIGNRSNATVEL 289 + S F +L + + PR L+E G GL R K+G + + EL Sbjct: 163 ARRSGLFAVLCKTDPNA----TPRHQGMSIVLVEPGP--GLTVSRDLPKLGYKGVESCEL 216 Query: 290 EFSN---TFGFLLGDLNVSTGPVEDMKIL----IYLDSAIMSVSGMRVSLAEAIHYARRR 342 F N +LG + G + MK L I + + + V+ +L +++ YA++R Sbjct: 217 SFDNLRVPVSAILGGA-MGQGFSQMMKGLETGRIQVAARALGVA--TAALEDSLAYAQQR 273 Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402 G + + +AD+A + AA L+ A +D + EA A++ A Sbjct: 274 ESFGRPIWQHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFA----- 328 Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGN 448 ++A + A+ GG GY E + R++R++P ++LG G Sbjct: 329 --SEVAMEIALNAVRIHGGYGYSTEYDVERYFRDAPL--MILGEGT 370 >gi|83648760|ref|YP_437195.1| acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636803|gb|ABC32770.1| Acyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396] Length = 395 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 20/239 (8%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 GLTE G+D ++ ++ ++++DG Y L G K W +SP++D ++ A+++G + F++ Sbjct: 138 FGLTEPDSGSDPGSMRTRAERVADG-YLLKGTKMWITNSPIADVMVVWAKLDGEIRGFIL 196 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + ++ GL +++ K R++ T E+ + F +L + + GP + Sbjct: 197 EKGMK-----GLTAPKIEGKFSLRASITGEIVMDDVFVPEANMLPNASGLKGPFGCLNKA 251 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 Y A ++ +A Y R G L +++ +A++ +I+ + Sbjct: 252 RY-GIAWGALGAAEFCWTQARQYCLDRKQFGRPLAANQLVQLKLANMQTEISIGLQGCLQ 310 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCK-MAPAVIAEAMECIGGSGYIEERSIARH 433 DE + E +++ I + C K + A IA M GG+G +E + RH Sbjct: 311 AGRLMDEGRCAPE------LISLIKRNSCGKALDIARIARDMH--GGNGIADEFHVIRH 361 >gi|23501316|ref|NP_697443.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|161618387|ref|YP_001592274.1| acyl-CoA dehydrogenase domain-containing protein [Brucella canis ATCC 23365] gi|254703765|ref|ZP_05165593.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|260566981|ref|ZP_05837451.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261754412|ref|ZP_05998121.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] gi|23347206|gb|AAN29358.1| acyl-CoA dehydrogenase family protein [Brucella suis 1330] gi|161335198|gb|ABX61503.1| acyl-CoA dehydrogenase domain protein [Brucella canis ATCC 23365] gi|260156499|gb|EEW91579.1| acyl-CoA dehydrogenase [Brucella suis bv. 4 str. 40] gi|261744165|gb|EEY32091.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 592 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|134298279|ref|YP_001111775.1| acyl-CoA dehydrogenase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050979|gb|ABO48950.1| acyl-CoA dehydrogenase domain protein [Desulfotomaculum reducens MI-1] Length = 380 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 25/268 (9%) Query: 190 PMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSP-MSDAFIMLAQ 248 P+ + + LTE + G+D AA+ + D Y L+G K F+++ +D ++ + Sbjct: 113 PLCEGKMLGAFALTEPQAGSDAAALKCTAVRKGDK-YILNGSKIFITNGGYADMYVTFVR 171 Query: 249 VEGRVGCF-LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTG 307 + + V L+ D GL + + K+G +ATV L F + ++ V Sbjct: 172 TDPSTKNYNGVTCLIVDKDTPGLVIGKPEEKMGLNGSATVTLTFEDA------EVPVENR 225 Query: 308 PVEDMK----ILIYLDSAIMSVSGMRVSLAEA-----IHYARRRHVSGGILIDQPVMKRA 358 +E+ K + L+ +++ + +A+ I Y + R G L Q ++ Sbjct: 226 LLEEGKGFNVAMGLLNGGRITIGAQGLGIAQGALDLTIPYVKGREQFGKPLSAQQGIQFM 285 Query: 359 IADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMEC 418 +AD+A +I A+ L +R A KS E A MA K + A V + ++ Sbjct: 286 LADMATEIDASRLLIYRAA----WLKSNGLEHAMEASMA---KRFATDTAMRVTTDCVQL 338 Query: 419 IGGSGYIEERSIARHYRESPANSILLGS 446 GG GY +E I R+ R++ I G+ Sbjct: 339 FGGYGYCKEYQIERYMRDAKITQIYEGA 366 >gi|171684241|ref|XP_001907062.1| hypothetical protein [Podospora anserina S mat+] gi|170942081|emb|CAP67733.1| unnamed protein product [Podospora anserina S mat+] Length = 435 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 20/254 (7%) Query: 198 IGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV------- 249 + G+TE G D ++++ K SDG Y ++G K W + ++ I+LA+ Sbjct: 158 VCFGVTEPNAGLDTLRLSTRATKQSDGSYKVTGQKIWITCAQVASKMILLARTTPLEEVK 217 Query: 250 EGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPV 309 + G L L+ SP GL +R+K K+G R+ E+ F N + +G ++ Sbjct: 218 KPSEGLSLFCIDLDRSSP-GLELRRIK-KMGGRAVDANEVFFDN---YSVGVDSLIGEEG 272 Query: 310 EDMKILIY-LDSAIMSVSGMRV-----SLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363 + KI+++ +++ ++G + +L +A YAR R+V + + +A++ Sbjct: 273 QGFKIILHGMNAERCLLAGEALGLGYAALGKAATYARERNVFKRPIGQNQGIAHPLAEVY 332 Query: 364 LDIAAATALSFRLANSFDEAKS-RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGS 422 + + AA ++ A +D +K+ ++ + KY + A + A+ GG Sbjct: 333 MKLEAAKLATYHAAQLYDSSKADKTIRQDAVGVACNSAKYLAAEAAFSACERAVLTHGGM 392 Query: 423 GYIEERSIARHYRE 436 GY E + R++RE Sbjct: 393 GYAVEYDVERYFRE 406 >gi|50084877|ref|YP_046387.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1] gi|19068131|gb|AAL54851.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1] gi|49530853|emb|CAG68565.1| acyl coenzyme A dehydrogenase [Acinetobacter sp. ADP1] Length = 379 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 53/315 (16%) Query: 151 LMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTD 210 L+SP + + M + K W PK+ S E V + +TE G+D Sbjct: 92 LVSPYIQN------MGSEAQKKYWLPKMVSGE-------------VVTAIAMTEANAGSD 132 Query: 211 IAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLAQVEGRVGCFLVPRLLEDGSPNG 269 + AI +Q + + Y + G K F+S+ + +D +++A+ + + + L D G Sbjct: 133 LQAIRTQA-ILKNEHYVIDGSKTFISNGLHADLIVLVAKTDPQARAKGISLFLVDAQLEG 191 Query: 270 LCYQRLKNKIGNRSNATVELEFSNT--------------FGFLLGDLNVSTGPVEDMKIL 315 + R KIG + T EL F F +L+ +L P E + I Sbjct: 192 VEKGRSLKKIGLHAQDTAELFFDGVHVPVTQRLGQEGQGFAYLMQEL-----PRERLSI- 245 Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375 A+M + + ++ Y R R G L + IA+ + AA A Sbjct: 246 -----AMMGMGSIWGAIDLTTSYVRERKAFGQTLAQLQNTRFVIANAQIKAKAAQAFIHE 300 Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435 A + + A + IT C VI + ++ GG GY++E I+R + Sbjct: 301 CAQMYHQGALTVGHVAALKCF--ITDTQC-----DVIDQLLQLFGGYGYMQEYPISRFFV 353 Query: 436 ESPANSILLGSGNAM 450 +S I G+ M Sbjct: 354 DSRVQKIYGGTNEIM 368 >gi|42522736|ref|NP_968116.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100] gi|39573932|emb|CAE79109.1| isovaleryl-CoA dehydrogenase [Bdellovibrio bacteriovorus HD100] Length = 428 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 18/249 (7%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMS------DAFIMLAQVEGR 252 + ++E GTD+ + + K D Y ++G K W + + D ++ A+ + Sbjct: 157 MAMSEPAIGTDVLGMQTTAVKKGDE-YIINGRKMWITNGTIDENNTPCDLVLVYARTGEK 215 Query: 253 VGCFLVPRLLEDGSPNGLCY-QRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGP 308 G L+ L + G Q++K+K+G R + T EL F + L+G S Sbjct: 216 HGRALISTFLVEKDHKGFAVGQKIKDKLGMRGSNTAELVFQDCHVPASALIGHEGDSMLH 275 Query: 309 VEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + + L A MS+ R S+ YA R G L M+R IAD + A Sbjct: 276 MMRNLEIERLTLAAMSLGIARRSIEIMNRYATEREAFGKSLNHFGQMQRYIADSYAEYKA 335 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 A A + A D K + R+ + K MA V A++ +GG GY+ E Sbjct: 336 ARAYVYETARRMDLNKEGN------RLDSDGVKLVATTMAKNVADRAIQVLGGYGYVGEY 389 Query: 429 SIARHYRES 437 + R +R++ Sbjct: 390 VVERLWRDA 398 >gi|90425769|ref|YP_534139.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] gi|90107783|gb|ABD89820.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB18] Length = 404 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 29/245 (11%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQV---EGRVGC 255 GLTE G+D + ++ +K+SDG Y L+G K W ++P++D F++ A+ ++ Sbjct: 146 FGLTEPDAGSDPGGMKTRAEKVSDG-YRLTGTKMWISNAPIADVFVVWAKSPEHNNQIRG 204 Query: 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGD----LNVS--TGPV 309 F +LE G GL ++ K+ R++ T E+ G ++G+ NV+ GP Sbjct: 205 F----ILEKGM-KGLSAPKIGGKLSLRASITGEIVMD---GVVVGEEALLPNVAGLKGPF 256 Query: 310 EDMKILIY-LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAA 368 + Y + +M + +A A Y R L ++++ +AD+ +IA Sbjct: 257 GCLNRARYGISWGVMGAA--EDCMARARQYTLDRKQFNRPLAATQLVQKKLADMQTEIAL 314 Query: 369 ATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEER 428 S R+ DE K E M I K C A + A + GG+G E Sbjct: 315 GLQGSLRVGRLMDEGKMAPE-------MISIVKRNNCGKALDIARMARDMHGGNGIQIEY 367 Query: 429 SIARH 433 + RH Sbjct: 368 HVMRH 372 >gi|254701219|ref|ZP_05163047.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261751758|ref|ZP_05995467.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261741511|gb|EEY29437.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis bv. 5 str. 513] Length = 592 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|221369193|ref|YP_002520289.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides KD131] gi|221162245|gb|ACM03216.1| Acyl-CoA dehydrogenase domain protein [Rhodobacter sphaeroides KD131] Length = 377 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 34/311 (10%) Query: 163 ALMTTPRVHKDWAPKIFSREYDPTNKA----PMQKTSVAIGLGLTEKRGGTDIAAITSQG 218 A+ T VH I R P + P + + LTE G+D +A+ S+ Sbjct: 81 AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRA 140 Query: 219 QKISDGIYCLSGHKWFLSSP-MSDAFIMLAQVEGRVG-----CFLVPRLLEDGSPNGLCY 272 ++ + G Y + G K F++S ++ I+ A++EG G CFL P +P G Sbjct: 141 RR-AGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGITCFLTP----TDTP-GYEV 194 Query: 273 QRLKNKIGNRSNATVELEFSN-------TFGFLLGDLNVSTGPVEDMKILIYLDSAIMSV 325 ++++K+G ++ T L F + G ++ +E +I I A SV Sbjct: 195 VKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETGRIGI----AAQSV 250 Query: 326 SGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 + +L A+ YAR R G LI+ + +A+ + AA + A D + Sbjct: 251 GMAQAALEAAVAYARERTSFGRSLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQP 310 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 EAA A++ A + A ++++A++ GG GY + + R YR+ I G Sbjct: 311 CLTEAAMAKLFA-------SEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEG 363 Query: 446 SGNAMVLDVLN 456 + + + +L Sbjct: 364 TSDIQKMLILR 374 >gi|163842694|ref|YP_001627098.1| acyl-CoA dehydrogenase domain-containing protein [Brucella suis ATCC 23445] gi|163673417|gb|ABY37528.1| acyl-CoA dehydrogenase domain protein [Brucella suis ATCC 23445] Length = 592 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|62289399|ref|YP_221192.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|82699326|ref|YP_413900.1| acyl-CoA dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|189023650|ref|YP_001934418.1| Acyl-CoA dehydrogenase [Brucella abortus S19] gi|237814885|ref|ZP_04593883.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308 A] gi|254688712|ref|ZP_05151966.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254693195|ref|ZP_05155023.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|254696840|ref|ZP_05158668.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254709562|ref|ZP_05171373.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis B2/94] gi|254713021|ref|ZP_05174832.1| Acyl-CoA dehydrogenase [Brucella ceti M644/93/1] gi|254716624|ref|ZP_05178435.1| Acyl-CoA dehydrogenase [Brucella ceti M13/05/1] gi|254729745|ref|ZP_05188323.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256031054|ref|ZP_05444668.1| Acyl-CoA dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256256959|ref|ZP_05462495.1| Acyl-CoA dehydrogenase [Brucella abortus bv. 9 str. C68] gi|256368868|ref|YP_003106374.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] gi|260168185|ref|ZP_05754996.1| acyl-CoA dehydrogenase family protein [Brucella sp. F5/99] gi|260545849|ref|ZP_05821590.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260754190|ref|ZP_05866538.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260757410|ref|ZP_05869758.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761235|ref|ZP_05873578.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883215|ref|ZP_05894829.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261213437|ref|ZP_05927718.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261218425|ref|ZP_05932706.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261317090|ref|ZP_05956287.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261320726|ref|ZP_05959923.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261757645|ref|ZP_06001354.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|265988126|ref|ZP_06100683.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|297247812|ref|ZP_06931530.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] gi|62195531|gb|AAX73831.1| acyl-CoA dehydrogenase family protein [Brucella abortus bv. 1 str. 9-941] gi|82615427|emb|CAJ10396.1| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain [Brucella melitensis biovar Abortus 2308] gi|189019222|gb|ACD71944.1| Acyl-CoA dehydrogenase [Brucella abortus S19] gi|237789722|gb|EEP63932.1| acyl-CoA dehydrogenase family protein [Brucella abortus str. 2308 A] gi|255999026|gb|ACU47425.1| acyl-CoA dehydrogenase family protein [Brucella microti CCM 4915] gi|260097256|gb|EEW81131.1| acyl-CoA dehydrogenase [Brucella abortus NCTC 8038] gi|260667728|gb|EEX54668.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260671667|gb|EEX58488.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674298|gb|EEX61119.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260872743|gb|EEX79812.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915044|gb|EEX81905.1| acyl-CoA dehydrogenase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260923514|gb|EEX90082.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M13/05/1] gi|261293416|gb|EEX96912.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M644/93/1] gi|261296313|gb|EEX99809.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis B2/94] gi|261737629|gb|EEY25625.1| acyl-CoA dehydrogenase [Brucella sp. F5/99] gi|264660323|gb|EEZ30584.1| acyl-CoA dehydrogenase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|297174981|gb|EFH34328.1| acyl-CoA dehydrogenase [Brucella abortus bv. 5 str. B3196] Length = 592 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|56418732|ref|YP_146050.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] gi|56378574|dbj|BAD74482.1| acyl-CoA dehydrogenase [Geobacillus kaustophilus HTA426] Length = 386 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 123/265 (46%), Gaps = 19/265 (7%) Query: 190 PMQKTSVAIG-LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPM-SDAFIMLA 247 P T IG LTE G++ AAI + + D Y ++G K ++++ + + F ++A Sbjct: 112 PKMATGEWIGAFALTEPSAGSNAAAIKTTAVRKGDR-YIINGSKHYITNAVDAHVFTVMA 170 Query: 248 QVEGRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--- 304 + G + + + G +++ K+G R + + EL F N + NV Sbjct: 171 VTDPSKGPKGITSFIVEKDFPGFIVGKVERKMGLRGSHSAELFFDN---LEVPAENVLGR 227 Query: 305 -STGPVEDMKILIYLDSAIMSVS-GMRVSLAE-AIHYARRRHVSGGILIDQPVMKRAIAD 361 G V +KIL + + + + G + L E + YA +R G +I+Q ++ +A+ Sbjct: 228 EGEGYVNALKILANGRAGLAARNLGSCIRLLEYCMEYAEQREQFGKPIIEQQAIQHMLAE 287 Query: 362 IALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGG 421 +++ I + +R+A D+ +EAA I K + ++ + A++ GG Sbjct: 288 MSMLIEVLRSTVYRVAWMVDQKMRVVKEAA-------IAKLFGSEVYNKIADMAVQIHGG 340 Query: 422 SGYIEERSIARHYRESPANSILLGS 446 GY+++ I R++R++ I G+ Sbjct: 341 LGYMKDYPIERYFRDARITKIYEGT 365 >gi|313108038|ref|ZP_07794204.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] gi|310880706|gb|EFQ39300.1| putative acyl-CoA dehydrogenase [Pseudomonas aeruginosa 39016] Length = 406 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 14/264 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 143 IGVSEVGAGSDVAGLKTTARKDGDD-YVINGSKMWITNSPSADFMCLLANTSDDKPHVNK 201 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYL 318 ++ G+ +K+G RS+ T ++ F N + + G M++L + Sbjct: 202 SLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIG-AEGAGFMMQMLQFQ 260 Query: 319 DSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSF 374 + + + G+ + I Y + R G LID V+ +A++ ++ A AL + Sbjct: 261 EERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVY 320 Query: 375 RLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHY 434 + + + + + A+ A++ A ++ V ++ GG G++ + ++R Y Sbjct: 321 QATELYVKGRDVTRLASMAKLKA-------GRLGREVSDACLQYWGGMGFMWDNPVSRAY 373 Query: 435 RESPANSILLGSGNAMVLDVLNLL 458 R++ SI G+ M+ + L+ Sbjct: 374 RDTRLVSIGGGADEIMLGIICKLM 397 >gi|256159118|ref|ZP_05456939.1| Acyl-CoA dehydrogenase [Brucella ceti M490/95/1] gi|256254457|ref|ZP_05459993.1| Acyl-CoA dehydrogenase [Brucella ceti B1/94] gi|261221629|ref|ZP_05935910.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|265997591|ref|ZP_06110148.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] gi|260920213|gb|EEX86866.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti B1/94] gi|262552059|gb|EEZ08049.1| acyl-CoA dehydrogenase domain-containing protein [Brucella ceti M490/95/1] Length = 592 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 48/300 (16%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS---SPMSDAFIML---------A 247 + LTE + G+D+ A+ ++ ++ DG Y + G K F++ ++D + L A Sbjct: 160 MNLTEPQAGSDLGALRTRAERRDDGTYRIFGQKIFITYGEHDLTDNIVHLVLARLPDAPA 219 Query: 248 QVEGRVGCFLVPRLL--EDGS---PNGLCYQRLKNKIGNRSNATVELEFSNTF------- 295 +G + FLVP+ L EDGS N L L++K+G ++ T + + + F Sbjct: 220 GTKG-ISLFLVPKFLVNEDGSLGRRNDLFCSGLEHKMGIHASPTCTMIYGDGFVKGEEQG 278 Query: 296 --GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI----- 348 G+L+G+ N + M L I V + +A+ YA+ R + Sbjct: 279 AVGYLIGEENRGLACMFTMMNNARLLVGIQGVGVAEAAYQQALAYAKERKQGRALGADPK 338 Query: 349 -----LIDQPVMKR------AIADIALDIAAATALSFRLANSFDEAKSR--SEEAAYARI 395 +I+ P ++R A+ +A I A A + +++ D A ++ S+ A + Sbjct: 339 QGMSPIIEHPDVQRMLLTMKALTQVARSITYACAHAIDMSHVTDGADAQFWSDRAG---L 395 Query: 396 MAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455 + P+ K + V + ++ GG G+IEE A+ R++ I G+ +D++ Sbjct: 396 LTPLAKSFATDAGVDVSSLGIQIHGGMGFIEETGAAQLLRDARITPIYEGTNGIQAIDLV 455 >gi|239931119|ref|ZP_04688072.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291439488|ref|ZP_06578878.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291342383|gb|EFE69339.1| acyl-CoA dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 386 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 50/316 (15%) Query: 164 LMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQ-KIS 222 L T + W P++ S E V GLTE GG+D A + + + Sbjct: 100 LFGTEEQKRAWLPRLCSGE-------------VLGAFGLTEPDGGSDAGATRTTARLDEA 146 Query: 223 DGIYCLSGHKWFLSSPMSD--AFIMLAQVEGR-------VGCFLVPRLLEDGSPNGLCYQ 273 + ++G K F+++ +D + + V GR + +VP G+P G Sbjct: 147 TNEWVINGTKCFITNSGTDITGLVTVTAVTGRGPGGKPLISAIIVP----SGTP-GFTVA 201 Query: 274 RLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRV 330 +K+G ++ T EL F + LLG+ + L LD ++++ + Sbjct: 202 APYSKVGWNASDTRELSFQDVRVPASNLLGEEGRGY-----AQFLRILDEGRIAIAALAT 256 Query: 331 SLA-----EAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS 385 LA E++ YA+ RH G + ++ IAD +++ A TA RLA + +A S Sbjct: 257 GLAQGCVDESVKYAKERHAFGRPIGANQAIQFKIAD--MEMKAHTA---RLA--WRDAAS 309 Query: 386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLG 445 R + A + K + +A +A + GG G++ E +AR +R+S + +G Sbjct: 310 RLVAGEPFKKEAALAKLYSSTVAVDNARDATQIHGGYGFMNEYPVARMWRDS--KILEIG 367 Query: 446 SGNAMVLDVLNLLEKG 461 G + V +L E G Sbjct: 368 EGTSEVQRMLIARELG 383 >gi|229591811|ref|YP_002873930.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] gi|229363677|emb|CAY51038.1| putative acyl-CoA dehydrogenase [Pseudomonas fluorescens SBW25] Length = 385 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 +G++E G+D+A + + +K D Y ++G K W +SP +D +LA Sbjct: 123 IGVSETGAGSDVAGLKTHARKDGDD-YVINGSKMWITNSPSADFICLLANTSDDKPHINK 181 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNV--STGPVEDMKILI 316 ++ + G+ K+G S+ T ++ F G + N G M++L Sbjct: 182 SLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFD---GVRVPQRNRIGHEGAGFMMQMLQ 238 Query: 317 YLDSAIMS----VSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATAL 372 + + + + G+ + I Y + R G LID V+ +A+++ +I AL Sbjct: 239 FQEERLFGAANMIKGLEHCIDTTIEYCKERQTFGKALIDNQVIHFRLAELSTEIECLRAL 298 Query: 373 SFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432 ++ + + + + A+ A++ A ++ V ++ GG G++ + +AR Sbjct: 299 VYQATEQYIKGQDVTRLASMAKLKAG-------RLGREVSDSCLQYWGGMGFMWDNPVAR 351 Query: 433 HYRESPANSILLGSGNAMV 451 YR+ SI G+ M+ Sbjct: 352 AYRDVRLVSIGGGADEIML 370 >gi|284989715|ref|YP_003408269.1| acyl-CoA dehydrogenase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062960|gb|ADB73898.1| acyl-CoA dehydrogenase domain protein [Geodermatophilus obscurus DSM 43160] Length = 399 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 32/262 (12%) Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFI--MLAQVEG------RVGCFLV- 258 G+D+A I ++ + +DG Y + G K +L++ S + ++ EG + FLV Sbjct: 135 GSDVAGIRTRAVRQADGDYVIDGQKMWLTNGGSSTLVAALVRTDEGAEKAHQNLTTFLVE 194 Query: 259 -PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEF-------SNTFGFLLG-DLNVSTGPV 309 P + P G+ +K+G + T EL F S+ G + G V Sbjct: 195 KPAGFGEVVP-GITIPGKIDKMGYKGVDTTELVFDGYRAEASDVLGGVPGRGFAQMMDGV 253 Query: 310 EDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAA 369 E ++ + + +S+ +++A YA++R G + + +A++A + AA Sbjct: 254 EVGRVNVAARACGISIRAFELAIA----YAQQRETFGKPIAQHQAIAFQLAEMATKVEAA 309 Query: 370 TALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERS 429 A+ + A D K EA A+++A +C + V ++ GG GY +E Sbjct: 310 HAMMVKAARLKDAGKRNDVEAGMAKLLA---SEYCAE----VTTQSFRIHGGYGYSKEYE 362 Query: 430 IARHYRESPANSILLGSGNAMV 451 I R RE+P +L+G G + + Sbjct: 363 IERLMREAP--FLLIGEGTSEI 382 >gi|172064132|ref|YP_001811783.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996649|gb|ACB67567.1| acyl-CoA dehydrogenase domain protein [Burkholderia ambifaria MC40-6] Length = 393 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%) Query: 200 LGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVGCFLV 258 L ++E G+D+ ++ + K D Y L+G K W + P D ++ A+ + G + Sbjct: 129 LAMSEPNAGSDVVSMKLRADKRGDH-YVLNGTKMWITNGPDCDTLVVYAKTDLDAGSRGI 187 Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315 + + G + +K+G R + T EL F + +LG LN G V+ + Sbjct: 188 TAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVE