PSIBLAST alignment of GI: 254780299 and protein with PDB id: 1ukw
>gi|56966249|pdb|1UKW|A Chain A, Crystal Structure Of Medium-Chain Acyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 379
>gi|56966250|pdb|1UKW|B Chain B, Crystal Structure Of Medium-Chain Acyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 379
Score = 273 bits (697), Expect = 7e-71, Method: Composition-based stats.
Identities = 67/357 (18%), Positives = 125/357 (35%), Gaps = 37/357 (10%)
Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTS-ASMVALMTTPRV 170
GL +I + + K +A G P + L+
Sbjct: 47 EVGLLNAIIPEEYGGMGLK--MLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTE- 103
Query: 171 HKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSG 230
E P+ + L+E G+D AA+ ++ + D Y L+G
Sbjct: 104 -----------EQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGD-HYVLNG 151
Query: 231 HKWFLSSP-MSDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSN 284
K ++S+ ++ ++ A V V +V R ++ K+G R++
Sbjct: 152 TKMWISNGGEAEWVVVFATVNPELRHKGVVALVVERGTPG-----FKAIKIHGKMGQRAS 206
Query: 285 ATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARR 341
T EL F + LG+ + A SV R +L EA YA+
Sbjct: 207 GTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKE 266
Query: 342 RHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITK 401
R G + + ++ + D+ + I A ++ A D+ + +A I K
Sbjct: 267 REAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASA-------IAK 319
Query: 402 YWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLL 458
+ ++A +A++ GG GY+ E + + R+ N I G+ L + +
Sbjct: 320 AYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHI 376