>gnl|CDD|173850 cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer. Length = 409

Score = 58.6 bits (142), Expect = 5e-09 Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 33/279 (11%) Query: 202 LTEKRGGTDIAAITSQGQKISDG-IYCLSGHK-WFLSSPMSDAFIMLAQVEG-------- 251 LTE G+D A+I + DG Y L+G K W + ++D F + A+ E Sbjct: 144 LTEPSSGSDAASIRTTAVLSEDGKHYVLNGSKIWITNGGIADIFTVFAKTEVKDATGSVK 203 Query: 252 -RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNT---FGFLLGDLNVSTG 307 ++ F+V R G NG + K+G + + T E+ F + +LG+ V G Sbjct: 204 DKITAFIVERSFG-GVTNGP----PEKKMGIKGSNTAEVYFEDVKIPVENVLGE--VGDG 256 Query: 308 PVEDMKIL--IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALD 365 M IL + M+ + +A+ YA R G + + +++ +A++A+ Sbjct: 257 FKVAMNILNNGRFGMGAALIGTMKRCIEKAVDYANNRKQFGKKIHEFGLIQEKLANMAIL 316 Query: 366 IAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYI 425 A ++++ + + D R +A Y I A I+K + + A V+ EA++ GG G++ Sbjct: 317 QYATESMAYMTSGNMD----RGLKAEYQ-IEAAISKVFASEAAWLVVDEAIQIHGGMGFM 371 Query: 426 EERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGTNL 464 E + R R+ I G+ ++L L T L Sbjct: 372 REYGVERVLRDLRIFRIFEGTN-----EILRLFIALTGL 405

RPSBLAST alignment for GI: 254780299 and conserved domain: cd01161