RPSBLAST alignment of GI: 254780299 and protein with PDBid: 2ddh

>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A* Length = 661
 Score =  106 bits (265), Expect = 1e-23
 Identities = 67/448 (14%), Positives = 117/448 (26%), Gaps = 73/448 (16%)

Query: 70  AQELARMANYNTPQLHAYGPGGERWDKVEF-HPAWHALLRRSIHDGLHCSIWDRS--FEP 126
            +E A  A +N   +     G    +         + +L          +   RS  +E 
Sbjct: 6   RKERAS-ATFNPELITHILDGSP--ENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEV 62

Query: 127 VVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-------------MTTPRVHKD 173
            V+K A  ++  R Y ++  E       SV       L               T    + 
Sbjct: 63  AVKKSATMVKKMREYGISDPEEIMWFKNSVHRGHPEPLDLHLGMFLPTLLHQATAEQQER 122

Query: 174 WAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD------GIYC 227
           +    ++ E   T                TE   GT +  + +                 
Sbjct: 123 FFMPAWNLEITGT-------------YAQTEMGHGTHLRGLETTATYDPKTQEFILNSPT 169

Query: 228 LSGHKWFLSS--PMSDAFIMLAQVEGRVG-----CFLVPRLLEDG--SPNGLCYQRLKNK 278
           ++  KW+       S+  I+LAQ+  +        F+VP           G+    +  K
Sbjct: 170 VTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPK 229

Query: 279 IGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIM--------------S 324
            G        L+  N        L        D   +  L + +               +
Sbjct: 230 FGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNA 289

Query: 325 VSGMRVSLAEAIHYARRRHVSGGIL-------IDQPVMKRAIADIALDIAAATALSFRLA 377
              +  +   AI Y+  R  S           +D    +  +  +     A   +   + 
Sbjct: 290 AQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMK 349

Query: 378 NSFDE-----AKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIAR 432
            ++        +    E      +    K +    A A I E     GG GY     I  
Sbjct: 350 ETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPN 409

Query: 433 HYRESPANSILLGSGNAMVLDVLNLLEK 460
            Y          G    M+L     L K
Sbjct: 410 IYVTFTPACTFEGENTVMMLQTARFLMK 437