RPSBLAST alignment of GI: 254780299 and protein with PDBid: 2vig
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A* Length = 391
Score = 93.3 bits (231), Expect = 1e-19
Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 19/334 (5%)
Query: 141 YLMAQLEAGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGL 200
Y +A E + + S+ + + K + + P
Sbjct: 70 YAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEP 129
Query: 201 GLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGRVGCFLVPR 260
G G A + +G + W S+ + A A + FLVP
Sbjct: 130 GNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPM 189
Query: 261 LLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIY 317
+P GL + ++K+G R ++T L F + +LG+ + +
Sbjct: 190 ----PTP-GLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGR 244
Query: 318 LDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377
+ A ++ + +L A++YA R G L V++ +AD+AL + +A L++R A
Sbjct: 245 IGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAA 304
Query: 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRES 437
D K +EAA A K + A A+ +A++ +GG GY+ E RHYR++
Sbjct: 305 MLKDNKKPFIKEAAMA-------KLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDA 357
Query: 438 PANSILLGSGNAMVLD----VLNLLEKGTNLFEQ 467
I G+ L +L NL+ Q
Sbjct: 358 RITEIYEGTSEIQRLVIAGHLLRSYRSAENLYFQ 391