RPSBLAST alignment of GI: 254780299 and protein with PDBid: 2z1q

>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus} Length = 577

 Score = 84.9 bits (209), Expect = 4e-17
 Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 17/233 (7%)

Query: 226 YCLSGHKWFLSS-PMSDAFIMLAQVEGR-VGCFLVPRLLEDGSPNGLCYQRLKNKIGNRS 283
           Y L+G K ++S+   +  F + A+V+G     FLV R     +P GL +   + K+G ++
Sbjct: 173 YILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFLVER----DTP-GLSFGPEEKKMGIKA 227

Query: 284 NATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYAR 340
           ++T ++   +       +LG++        ++  +        +V G + +L  +  YA 
Sbjct: 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYAT 287

Query: 341 RRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-------KSRSEEAAYA 393
           +R   G  +    ++++ + ++A  I AA +  +R     DEA       ++        
Sbjct: 288 QRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEY 347

Query: 394 RIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGS 446
            + A I K    ++   V+ E ++  GG GY +E  I R YR++  N I  G+
Sbjct: 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGT 400