HHsearch alignment for GI: 254780300 and conserved domain: PRK00856
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional.
Probab=100.00 E-value=0 Score=701.40 Aligned_cols=303 Identities=49% Similarity=0.755 Sum_probs=287.5
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 97777741782238999999999999999964420487752128976999960787337899997987613521112333
Q gi|254780300|r 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTK 81 (316)
Q Consensus 2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~ 81 (316)
T Consensus 2 n~~~~k~~lsi~Dls~~ei~~ll~~A~~~K~~~~~~--~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~ 79 (304)
T PRK00856 2 NPLKMKHLLSIEDLSREEIELLLDTAEQFKAVPRVK--KVPLLRGKTVANLFFEPSTRTRLSFELAAKRLGADVINFSAS 79 (304)
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 988768808722199999999999999997332126--786568988999971587405788999998389669870666
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 32101333422479998741367146520321005542001234211112345663122332222222012221000100
Q gi|254780300|r 82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHI 161 (316)
Q Consensus 82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~i 161 (316)
T Consensus 80 ~s~~~kgEsi~DTarvls~y~~D~iv~R~~~~~~~~~~a~~s~vP-VINagdg~~eHPtQaLaDl~Ti~e~~g~l~glki 158 (304)
T PRK00856 80 TSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAEKVNVP-VINAGDGSHQHPTQALLDLLTIREEFGRLEGLKV 158 (304)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 465568978999999999727979999168656999999868998-8979999776846999879999986387778769
Q ss_pred EECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 10355443301334466420134205532775322211212343300584560368622100011331233344445554
Q gi|254780300|r 162 AICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIRE 241 (316)
Q Consensus 162 a~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~ 241 (316)
T Consensus 159 ~~vGD~~n~rv~~Sl~~~~~~~g~~~~~~~P~~~~p~~~~-~~~~~~~d~~~av~~aDvvy~trvq~Er~~~~~~~~~~~ 237 (304)
T PRK00856 159 AIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGIE-LGVRVHTDLEEVIEEADVVMMLRVQKERMDGGLLPSYEE 237 (304)
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHC-CCEEEECCHHHHHCCCCEEEEEHHHHHHHCCCCCHHHHH
T ss_conf 9984787456799999999976986999778533884446-983998699999626989998557777611421036887
Q ss_pred HCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 2023575889998379985995589987687447679769970168687756999999999997781
Q gi|254780300|r 242 YKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQ 308 (316)
Q Consensus 242 ~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~ 308 (316)
T Consensus 238 ~~~~y~v~~~~m~~a~~~ai~mHcLPa~Rg~Ei~~~V~d~~~s~v~~QaeNrl~~~~AvL~~llgg~ 304 (304)
T PRK00856 238 YHRQYGLTAERLALAKPDAIVMHPGPVNRGVEIASDVADGPQSRIFEQVTNGVAVRMAVLELLLGGR 304 (304)
T ss_pred HCCCEEECHHHHHCCCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2552345899996079998998979987886037877579846799998715999999999986799