HHsearch alignment for GI: 254780300 and conserved domain: PRK01713
>PRK01713 ornithine carbamoyltransferase; Provisional.
Probab=100.00 E-value=0 Score=647.20 Aligned_cols=301 Identities=24% Similarity=0.303 Sum_probs=274.6
Q ss_pred CC-CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99-77777417822389999999999999999644204877521289769999607873378999979876135211123
Q gi|254780300|r 1 MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ 79 (316)
Q Consensus 1 m~-~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~ 79 (316)
T Consensus 1 m~~~l~~rhlL~~~d~s~~ei~~il~~A~~~K~~~~~~~-~~~~L~gK~v~~lF~epSTRTR~SFE~A~~~LGg~~i~l~ 79 (334)
T PRK01713 1 MAFNLKNRHLLSLVNHTEREIKYLLDLSRDLKRAKYAGT-EQQRLKGKNIALIFEKTSTRTRCAFEVAAYDQGAQVTYID 79 (334)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 999999998387000999999999999999986652688-7877899989998479962689999999998599099847
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCC
Q ss_conf 3332101333422479998741367146520321005542001234211112345663122332222222012221-000
Q gi|254780300|r 80 TKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGK-ISN 158 (316)
Q Consensus 80 ~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~-l~~ 158 (316)
T Consensus 80 ~~~s~~~kgEsl~Dta~vls~~-~D~iv~R~~~~~~~~~~a~~~~vP-VIN-g~~~~~HPtQ~LaDl~Ti~E~~~~~l~g 156 (334)
T PRK01713 80 PTSSQIGHKESMKDTARVLGRM-YDAIEYRGFKQSIVNELAKYAGVP-VFN-GLTDEFHPTQMLADVLTMIEHCEKPLSE 156 (334)
T ss_pred CCCCCCCCCCCHHHHHHHHHHH-CCEEEEECCCHHHHHHHHHHCCCC-EEE-CCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 5124578998999999999962-858999546728999999865998-893-8978777589998899999984165467
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf 100103554433013344664201342055327753222112-----------123433005845603686221000113
Q gi|254780300|r 159 LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQ 227 (316)
Q Consensus 159 l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~ 227 (316)
T Consensus 157 l~ia~vGD~-~nnv~~S~~~~~~~lG~~v~i~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~~a~~~aDvvytd~w~ 235 (334)
T PRK01713 157 ISYVYIGDA-RNNMGNSLLLIGAKLGMDVRICAPKALLPEDSLVEMCEKFAKESGARITVTDDIDTAVKGVDFVHTDVWV 235 (334)
T ss_pred EEEEEECCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCEEEEEEEE
T ss_conf 499993897-5418899999999779979998897658788999999999997199089960788885678689876676
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHH-CCCCCEEECCCCC-------------------CCCCCCCHHHHCCCCCHHH
Q ss_conf 3123334444555420235758899983-7998599558998-------------------7687447679769970168
Q gi|254780300|r 228 QERIPRSLIPSIREYKHVYSLDEKKLKY-AKKDALVMHPGPI-------------------NRNYEISSSVADGSQSIIQ 287 (316)
Q Consensus 228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~-a~~~ai~mHcLP~-------------------~Rg~Ev~~~v~d~~~s~v~ 287 (316)
T Consensus 236 smg~~~~~~~er~~~~~~y~v~~elm~~~~~~~~~fmHcLPa~~~~e~~~~~~~~~~~P~~~rG~EIt~~V~d~p~S~if 315 (334)
T PRK01713 236 SMGEPLETWGERIDLLMPYQVTPELMKRTGNPKVKFMHCLPAFHNSETKVGRQIAEKYPALANGIEVTEEVFESPMNIAF 315 (334)
T ss_pred ECCCHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHCCCCCCHH
T ss_conf 36645777889987751783629999752899929968886665310000024565268887872865899688987326
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 6877569999999999977
Q gi|254780300|r 288 YQVEMGVAVRMAIIKELLE 306 (316)
Q Consensus 288 ~Qa~Nrl~~~~AlL~~~l~ 306 (316)
T Consensus 316 ~QAeNrlh~~kAvL~~~La 334 (334)
T PRK01713 316 EQAENRMHTIKAVMVASLA 334 (334)
T ss_pred HHHHHHHHHHHHHHHHHHC
T ss_conf 8987559999999999869