HHsearch alignment for GI: 254780300 and conserved domain: PRK01713

>PRK01713 ornithine carbamoyltransferase; Provisional.
Probab=100.00  E-value=0  Score=647.20  Aligned_cols=301  Identities=24%  Similarity=0.303  Sum_probs=274.6

Q ss_pred             CC-CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99-77777417822389999999999999999644204877521289769999607873378999979876135211123
Q gi|254780300|r    1 MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ   79 (316)
Q Consensus         1 m~-~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~   79 (316)
T Consensus         1 m~~~l~~rhlL~~~d~s~~ei~~il~~A~~~K~~~~~~~-~~~~L~gK~v~~lF~epSTRTR~SFE~A~~~LGg~~i~l~   79 (334)
T PRK01713          1 MAFNLKNRHLLSLVNHTEREIKYLLDLSRDLKRAKYAGT-EQQRLKGKNIALIFEKTSTRTRCAFEVAAYDQGAQVTYID   79 (334)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             999999998387000999999999999999986652688-7877899989998479962689999999998599099847


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCC
Q ss_conf             3332101333422479998741367146520321005542001234211112345663122332222222012221-000
Q gi|254780300|r   80 TKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGK-ISN  158 (316)
Q Consensus        80 ~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~-l~~  158 (316)
T Consensus        80 ~~~s~~~kgEsl~Dta~vls~~-~D~iv~R~~~~~~~~~~a~~~~vP-VIN-g~~~~~HPtQ~LaDl~Ti~E~~~~~l~g  156 (334)
T PRK01713         80 PTSSQIGHKESMKDTARVLGRM-YDAIEYRGFKQSIVNELAKYAGVP-VFN-GLTDEFHPTQMLADVLTMIEHCEKPLSE  156 (334)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHH-CCEEEEECCCHHHHHHHHHHCCCC-EEE-CCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             5124578998999999999962-858999546728999999865998-893-8978777589998899999984165467


Q ss_pred             CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf             100103554433013344664201342055327753222112-----------123433005845603686221000113
Q gi|254780300|r  159 LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQ  227 (316)
Q Consensus       159 l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~  227 (316)
T Consensus       157 l~ia~vGD~-~nnv~~S~~~~~~~lG~~v~i~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~~a~~~aDvvytd~w~  235 (334)
T PRK01713        157 ISYVYIGDA-RNNMGNSLLLIGAKLGMDVRICAPKALLPEDSLVEMCEKFAKESGARITVTDDIDTAVKGVDFVHTDVWV  235 (334)
T ss_pred             EEEEEECCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCEEEEEEEE
T ss_conf             499993897-5418899999999779979998897658788999999999997199089960788885678689876676


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHH-CCCCCEEECCCCC-------------------CCCCCCCHHHHCCCCCHHH
Q ss_conf             3123334444555420235758899983-7998599558998-------------------7687447679769970168
Q gi|254780300|r  228 QERIPRSLIPSIREYKHVYSLDEKKLKY-AKKDALVMHPGPI-------------------NRNYEISSSVADGSQSIIQ  287 (316)
Q Consensus       228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~-a~~~ai~mHcLP~-------------------~Rg~Ev~~~v~d~~~s~v~  287 (316)
T Consensus       236 smg~~~~~~~er~~~~~~y~v~~elm~~~~~~~~~fmHcLPa~~~~e~~~~~~~~~~~P~~~rG~EIt~~V~d~p~S~if  315 (334)
T PRK01713        236 SMGEPLETWGERIDLLMPYQVTPELMKRTGNPKVKFMHCLPAFHNSETKVGRQIAEKYPALANGIEVTEEVFESPMNIAF  315 (334)
T ss_pred             ECCCHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHCCCCCCHH
T ss_conf             36645777889987751783629999752899929968886665310000024565268887872865899688987326


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             6877569999999999977
Q gi|254780300|r  288 YQVEMGVAVRMAIIKELLE  306 (316)
Q Consensus       288 ~Qa~Nrl~~~~AlL~~~l~  306 (316)
T Consensus       316 ~QAeNrlh~~kAvL~~~La  334 (334)
T PRK01713        316 EQAENRMHTIKAVMVASLA  334 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHC
T ss_conf             8987559999999999869