HHsearch alignment for GI: 254780300 and conserved domain: PRK02102
>PRK02102 ornithine carbamoyltransferase; Validated.
Probab=100.00 E-value=0 Score=651.06 Aligned_cols=299 Identities=23% Similarity=0.293 Sum_probs=274.2
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r 3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN 82 (316)
Q Consensus 3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~ 82 (316)
T Consensus 4 ~l~~kh~L~~~dls~~ei~~il~~A~~~k~~~~~~~-~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ 82 (331)
T PRK02102 4 NLKGRSFLKLLDFTPAEIEYLIDLSIELKAAKKAGI-EHQYLKGKNIALIFEKTSTRTRCAFEVAAIDLGAHVTYLGPND 82 (331)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 998998185000999999999999999987664588-7766799989999558973059999999998599099578755
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 21013334224799987413671465203210055420012342111123456631223322222220122210001001
Q gi|254780300|r 83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIA 162 (316)
Q Consensus 83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia 162 (316)
T Consensus 83 s~~~kGEs~~Dt~~~Ls~~-~D~iviR~~~~~~~~~~a~~~~vP-VIN~~~-~~~HPtQ~L~Dl~Ti~e~~g~l~gl~i~ 159 (331)
T PRK02102 83 IQLGKKESMEDTARVLGRM-YDGIEYRGFSQEIVEELAKYSGVP-VWNGLT-DEWHPTQMLADFMTMKEHFGPLKGLKLA 159 (331)
T ss_pred CCCCCCCCHHHHHHHHHHH-CCEEEEECCCHHHHHHHHHHCCCC-EECCCC-CCCCHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 6377898989999999975-167899627728999999747986-454888-7648799999999999983875677389
Q ss_pred ECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf 0355443301334466420134205532775322211-----------21234330058456036862210001133123
Q gi|254780300|r 163 ICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERI 231 (316)
Q Consensus 163 ~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~ 231 (316)
T Consensus 160 ~vGD~-~nnVa~S~~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDVvytdvw~sm~~ 238 (331)
T PRK02102 160 YLGDG-RNNMANSLLVGGAKLGMDVRICAPKSLWPEEELVAQAKEIAKETGAKITITEDVEEAVKGADVIYTDVWVSMGE 238 (331)
T ss_pred EECCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCEEEEEHHHCCCH
T ss_conf 97887-64246689999985598599975864488979999999999982993899956666633576565303322334
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHC-CCCCEEECCCCC-----------------CCCCCCCHHHHCCCCCHHHHHHHHH
Q ss_conf 3344445554202357588999837-998599558998-----------------7687447679769970168687756
Q gi|254780300|r 232 PRSLIPSIREYKHVYSLDEKKLKYA-KKDALVMHPGPI-----------------NRNYEISSSVADGSQSIIQYQVEMG 293 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~v~~~~l~~a-~~~ai~mHcLP~-----------------~Rg~Ev~~~v~d~~~s~v~~Qa~Nr 293 (316)
T Consensus 239 ~~~-~~~r~~~~~~y~v~~~l~~~a~k~~ai~MH~LPa~~n~~~~~~~~~~~~~~~RG~EI~~~V~d~p~S~i~~QaeNr 317 (331)
T PRK02102 239 EEK-WEERIKLLKPYQVNMDLMKATGNPDVIFMHCLPAFHDTETKVGKEIAEKYGLKGLEVTDEVFESKYSIVFDEAENR 317 (331)
T ss_pred HHH-HHHHHHHHCCCEECHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECHHHHCCCCCCHHHHHHHH
T ss_conf 777-9999987407637899997347999489734877532232100222013577753866888488763025477521
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999999999778
Q gi|254780300|r 294 VAVRMAIIKELLEN 307 (316)
Q Consensus 294 l~~~~AlL~~~l~~ 307 (316)
T Consensus 318 l~~r~AvL~~~LGd 331 (331)
T PRK02102 318 MHTIKAVMVATLGD 331 (331)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999998478