HHsearch alignment for GI: 254780300 and conserved domain: PRK04523
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=602.34 Aligned_cols=294 Identities=24% Similarity=0.335 Sum_probs=252.8
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77774178223899999999999999996442048775212897699996078733789999798761352111233332
Q gi|254780300|r 4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNS 83 (316)
Q Consensus 4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s 83 (316)
T Consensus 1 m~mkhllsi~dls~~ei~~ll~~A~~~k~~~-----~~~~L~gk~v~~lF~epSTRTR~SFE~A~~rLGg~~i~l~~~~s 75 (335)
T PRK04523 1 MSLKHFLNTQDWSRAELDALLTQAAAFKRNK-----LGHALKGKSIALVFFNPSLRTRTSFELGAFQLGGHAIVLQPGKD 75 (335)
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHCCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9955417611189999999999999997089-----98778999899997379830499999999986998898468776
Q ss_pred C------------CCCCCCCCCHHHHHHHHCCCCEEEECCCCC----------HHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 1------------013334224799987413671465203210----------055420012342111123456631223
Q gi|254780300|r 84 A------------MKKGENIADTIATLNALRPNIIVIRHPYSG----------AVNSLMHKIKGPSIINAGDGTHEHPSQ 141 (316)
Q Consensus 84 ~------------~~kgEs~~Dta~vls~~~~d~iv~R~~~~~----------~~~~~a~~~s~ppVINag~~~~~HP~Q 141 (316)
T Consensus 76 s~~~~~~~g~~~~~~~~Esl~Dt~~vls~y-~D~iviR~~~~~~~~~~~~~~~~~~~~a~~s~vP-VIN~g~--~~HPtQ 151 (335)
T PRK04523 76 AWPIEFNLGTVMDGDTEEHIAEVARVLSRY-VDLIGVRAFPKFVDWEEDRQDPVLNSFAKYSTVP-VINMET--ITHPCQ 151 (335)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC-EECCCC--CCCCHH
T ss_conf 432224555322577776699999999843-9899993253234200001368999999866887-306888--888489
Q ss_pred HHHHHHHHHCCCCC-CCCCCEE--ECC--CCCCCCHHHHHHHHHHCCCCEEEECCCCC-CCCC-C----------CCCCC
Q ss_conf 32222222012221-0001001--035--54433013344664201342055327753-2221-1----------21234
Q gi|254780300|r 142 ALLDAFAIRHFKGK-ISNLHIA--ICG--DILHSRVARSDIMLLNTMGARIRVIAPIT-LLPK-D----------ISNMG 204 (316)
Q Consensus 142 ~LaDl~Ti~e~~g~-l~~l~ia--~vG--D~~~~~v~~S~~~~~~~~g~~v~~~~P~~-~~~~-~----------~~~~~ 204 (316)
T Consensus 152 aL~Dl~Ti~e~~g~~~~~~~~~i~~~~~~~~~~~~va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~ 231 (335)
T PRK04523 152 ELAHALALQEHFGTPLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAEQNAAESGGS 231 (335)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 99999999998386336987999985147744146989999999974990899817854679989999999999972985
Q ss_pred CCCCCCHHHCCCCCCEEEEEEECCHHHHHHHH--HHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCC
Q ss_conf 33005845603686221000113312333444--4555420235758899983799859955899876874476797699
Q gi|254780300|r 205 VEVFHDMQKGLKNVDVIMILRMQQERIPRSLI--PSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGS 282 (316)
Q Consensus 205 ~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~--~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~ 282 (316)
T Consensus 232 v~~~~d~~~al~~aDvvyt~~w~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~d~i~MHplP~~Rg~Ei~~~V~d~p 310 (335)
T PRK04523 232 VQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMDSP 310 (335)
T ss_pred EEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCC-CCCEEECCCCCCCCCCCCHHHHCCC
T ss_conf 999818999973232466666631121156102599999876378249997179-9979989999999880278885799
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7016868775699999999999778
Q gi|254780300|r 283 QSIIQYQVEMGVAVRMAIIKELLEN 307 (316)
Q Consensus 283 ~s~v~~Qa~Nrl~~~~AlL~~~l~~ 307 (316)
T Consensus 311 ~s~v~~Qa~Ngv~~rmAiL~~ll~~ 335 (335)
T PRK04523 311 NCIAIDEAENRLHVQKAIMAALASQ 335 (335)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8769999873099999999998486