HHsearch alignment for GI: 254780300 and conserved domain: PRK11891
>PRK11891 aspartate carbamoyltransferase; Provisional.
Probab=100.00 E-value=0 Score=578.96 Aligned_cols=306 Identities=32% Similarity=0.471 Sum_probs=278.8
Q ss_pred CCCC-CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-C
Q ss_conf 7777-4178223899999999999999996442048775212897699996078733789999798761352111233-3
Q gi|254780300|r 4 FPLY-NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT-K 81 (316)
Q Consensus 4 f~~k-~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~-~ 81 (316)
T Consensus 85 ~~~~~HiLSv~qf~R~~l~~lF~vA~~m~-~~a~r~~~~~vL~GkILa~LFfEpSTRTr~SFe~Am~RLGG~Vi~~~~~~ 163 (430)
T PRK11891 85 FEGKPQLLSVDQFSRDSVEALFRVADMMQ-PIARRQKISRVLEGAVLGNLFFEASTRTRVSFGAAFCRLGGSVCDTTGFT 163 (430)
T ss_pred HCCCCEEEEHHHCCHHHHHHHHHHHHHHH-HHHHHHCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCC
T ss_conf 25885177455428989999999999988-98866233113147578886237867506689999997798183678887
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC----CCC
Q ss_conf 3210133342247999874136714652032100554200123421111234566312233222222201222----100
Q gi|254780300|r 82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKG----KIS 157 (316)
Q Consensus 82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g----~l~ 157 (316)
T Consensus 164 ~SS~~KGEsl~DT~r~l~~Y-~D~iV~RHp~~Gs~~~aa~~s~vP-VINaGDG~~eHPTQaLLDl~TI~~e~g~~~~~id 241 (430)
T PRK11891 164 FSSMAKGESIYDTSRVMSGY-VDALVIRHPEQGSVAEFARATNLP-VINGGDGPGEHPSQALLDLYTIQREFSRLGKIVD 241 (430)
T ss_pred CCCCCCCCCHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 46423777799999999626-989999189835899998647987-3635788666832677777889987532235557
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCC-CCCCC------CCCCCCCCCCHHHCCCCCCEEEEEEECCH
Q ss_conf 01001035544330133446642013-420553277532-22112------12343300584560368622100011331
Q gi|254780300|r 158 NLHIAICGDILHSRVARSDIMLLNTM-GARIRVIAPITL-LPKDI------SNMGVEVFHDMQKGLKNVDVIMILRMQQE 229 (316)
Q Consensus 158 ~l~ia~vGD~~~~~v~~S~~~~~~~~-g~~v~~~~P~~~-~~~~~------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e 229 (316)
T Consensus 242 Gl~IalvGDLKyGRTVHSL~klLs~y~~v~~~lVSP~~L~mP~~i~~~l~~~g~~~~e~~~L~e~i~~~DVlY~TRIQkE 321 (430)
T PRK11891 242 GAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVDQISTNGHVIEQTDDLAAGLRGADVVYATRIQKE 321 (430)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEECCCCCC
T ss_conf 85799864545660098999999854694699989213079889999999779869993787574034798985773314
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHH-HHCCCCCEEECCCCCCC---CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 233344445554202357588999-83799859955899876---87447679769970168687756999999999997
Q gi|254780300|r 230 RIPRSLIPSIREYKHVYSLDEKKL-KYAKKDALVMHPGPINR---NYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305 (316)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~l-~~a~~~ai~mHcLP~~R---g~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l 305 (316)
T Consensus 322 RF~~e---e~~~~~~~~~l~~~~l~~~aK~~~iIMHPLPRnsr~~vnEIs~eVD~dPRAaYFRQa~nGv~VRMALLalvL 398 (430)
T PRK11891 322 RFTDE---SFEGYTPDFQINQALVDAVCKPDTLIMHPLPRDSRPGANDLSTDLNRDPRLAIFRQTDNGIPVRMAIFAVLL 398 (430)
T ss_pred CCCCH---HHHHHHCCEEECHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 48976---788874787787999985269997887998989888878177524589610388887518999999999982
Q ss_pred CCCCCCCCCC
Q ss_conf 7814222012
Q gi|254780300|r 306 ENQNKITQKE 315 (316)
Q Consensus 306 ~~~~~~~~~~ 315 (316)
T Consensus 399 GV~~~v~~~~ 408 (430)
T PRK11891 399 GVENLVQHSM 408 (430)
T ss_pred CCHHHHHHHC
T ss_conf 9377776525