HHsearch alignment for GI: 254780300 and conserved domain: PRK13376
>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional.
Probab=100.00 E-value=0 Score=427.00 Aligned_cols=306 Identities=27% Similarity=0.409 Sum_probs=263.7
Q ss_pred CC-CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC-
Q ss_conf 99-77777417822389999999999999999644204877521--289769999607873378999979876135211-
Q gi|254780300|r 1 MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTR--LQGLTQINLFLETSTRTQTSFEVAGKLLGVHVI- 76 (316)
Q Consensus 1 m~-~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~--L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i- 76 (316)
T Consensus 1 m~~~f~grsl~vi~d~sv~eq~fly~~tk~lk~~~~~~~d~~ef~ik~d~~iyivFfEPSTRTRlSFesAa~~lgG~vV~ 80 (524)
T PRK13376 1 MKRDFLGRSLTVIEDLSVEEQLFLYEKTKELKQKWYNKEDVSEFQIKKDVGIYIVFVEPSTRTKESFINAAKFHKNAKVN 80 (524)
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 97431465035430356588899999899999986340332120451544289999668773077799999984897675
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCC--CEEEECCCCCH-------HHHHHCCC--CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 1233332101333422479998741367--14652032100-------55420012--3421111234566312233222
Q gi|254780300|r 77 NINTKNSAMKKGENIADTIATLNALRPN--IIVIRHPYSGA-------VNSLMHKI--KGPSIINAGDGTHEHPSQALLD 145 (316)
Q Consensus 77 ~l~~~~s~~~kgEs~~Dta~vls~~~~d--~iv~R~~~~~~-------~~~~a~~~--s~ppVINag~~~~~HP~Q~LaD 145 (316)
T Consensus 81 ~~~~~sSS~~KGESL~DTirvlsgY-sDasIIVmRHP~eGaaRll~e~v~efA~~~~v~vp~~INAGDG~nEHPTQaLLD 159 (524)
T PRK13376 81 IFDSEHSSFNKQESYVDTFNMLTGY-SDYSIFIVRTRLEGVCRLLERKVSEFASRHGIERPAFINAGDGKHEHPTQELLD 159 (524)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHH
T ss_conf 3376655201585099999998633-676279994788772145678899888644898785377888988883289999
Q ss_pred HHHHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCC-CCCC------CCCCCCCCCCCHHHCCC
Q ss_conf 222201222-10001001035544330133446642013-420553277532-2211------21234330058456036
Q gi|254780300|r 146 AFAIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTM-GARIRVIAPITL-LPKD------ISNMGVEVFHDMQKGLK 216 (316)
Q Consensus 146 l~Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~-g~~v~~~~P~~~-~~~~------~~~~~~~~~~d~~ea~~ 216 (316)
T Consensus 160 LfTI~ee~g~~~~~I~IAlVGDLK~GRTVHSL~~aL~~fkNV~~~LISPeEL~MP~~yiekmk~~G~evr~f~si~eyl~ 239 (524)
T PRK13376 160 EFTFLEQNNFDNSFIHIALVGDLLHGRTVHSKVNGLKIFKNVKVDLIAPEELQMPEHYIEKMKKNGFEVRIFSSIEEYLK 239 (524)
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHCCCHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf 99999983877785599997443457118889988876248389998878806988999999866914885104999870
Q ss_pred CCCE---EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCC-CCCHHHHCCCCCHHHHHHHH
Q ss_conf 8622---1000113312333444455542023575889998379985995589987687-44767976997016868775
Q gi|254780300|r 217 NVDV---IMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNY-EISSSVADGSQSIIQYQVEM 292 (316)
Q Consensus 217 ~aDv---v~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~-Ev~~~v~d~~~s~v~~Qa~N 292 (316)
T Consensus 240 ~~~~a~iwyftrlqlermge~ilek~~~lr~~vtf~k~~l~~~pe~~kfyhplpr~~~~ptip~fld~~plngwe~qa~n 319 (524)
T PRK13376 240 QKDVAKIWYFTRLQLERMGEDILEKEHILRKSVTFRKEFLDKLPEGVKFYHPLPRHKVYPTIPTFLDTLPLNGWETQAIN 319 (524)
T ss_pred CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
T ss_conf 47611247750888987778888889998765202787875363666003668855568987642357888715555305
Q ss_pred HHHHHHHHHHHHHCCC
Q ss_conf 6999999999997781
Q gi|254780300|r 293 GVAVRMAIIKELLENQ 308 (316)
Q Consensus 293 rl~~~~AlL~~~l~~~ 308 (316)
T Consensus 320 gy~~r~vllsm-lgga 334 (524)
T PRK13376 320 GYWVRIVLLSM-LGGA 334 (524)
T ss_pred CEEHHHHHHHH-HCCC
T ss_conf 54469999998-5464