HHsearch alignment for GI: 254780300 and conserved domain: PRK13376

>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional.
Probab=100.00  E-value=0  Score=427.00  Aligned_cols=306  Identities=27%  Similarity=0.409  Sum_probs=263.7

Q ss_pred             CC-CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC-
Q ss_conf             99-77777417822389999999999999999644204877521--289769999607873378999979876135211-
Q gi|254780300|r    1 MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTR--LQGLTQINLFLETSTRTQTSFEVAGKLLGVHVI-   76 (316)
Q Consensus         1 m~-~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~--L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i-   76 (316)
T Consensus         1 m~~~f~grsl~vi~d~sv~eq~fly~~tk~lk~~~~~~~d~~ef~ik~d~~iyivFfEPSTRTRlSFesAa~~lgG~vV~   80 (524)
T PRK13376          1 MKRDFLGRSLTVIEDLSVEEQLFLYEKTKELKQKWYNKEDVSEFQIKKDVGIYIVFVEPSTRTKESFINAAKFHKNAKVN   80 (524)
T ss_pred             CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             97431465035430356588899999899999986340332120451544289999668773077799999984897675


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCC--CEEEECCCCCH-------HHHHHCCC--CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             1233332101333422479998741367--14652032100-------55420012--3421111234566312233222
Q gi|254780300|r   77 NINTKNSAMKKGENIADTIATLNALRPN--IIVIRHPYSGA-------VNSLMHKI--KGPSIINAGDGTHEHPSQALLD  145 (316)
Q Consensus        77 ~l~~~~s~~~kgEs~~Dta~vls~~~~d--~iv~R~~~~~~-------~~~~a~~~--s~ppVINag~~~~~HP~Q~LaD  145 (316)
T Consensus        81 ~~~~~sSS~~KGESL~DTirvlsgY-sDasIIVmRHP~eGaaRll~e~v~efA~~~~v~vp~~INAGDG~nEHPTQaLLD  159 (524)
T PRK13376         81 IFDSEHSSFNKQESYVDTFNMLTGY-SDYSIFIVRTRLEGVCRLLERKVSEFASRHGIERPAFINAGDGKHEHPTQELLD  159 (524)
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHH
T ss_conf             3376655201585099999998633-676279994788772145678899888644898785377888988883289999


Q ss_pred             HHHHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCC-CCCC------CCCCCCCCCCCHHHCCC
Q ss_conf             222201222-10001001035544330133446642013-420553277532-2211------21234330058456036
Q gi|254780300|r  146 AFAIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTM-GARIRVIAPITL-LPKD------ISNMGVEVFHDMQKGLK  216 (316)
Q Consensus       146 l~Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~-g~~v~~~~P~~~-~~~~------~~~~~~~~~~d~~ea~~  216 (316)
T Consensus       160 LfTI~ee~g~~~~~I~IAlVGDLK~GRTVHSL~~aL~~fkNV~~~LISPeEL~MP~~yiekmk~~G~evr~f~si~eyl~  239 (524)
T PRK13376        160 EFTFLEQNNFDNSFIHIALVGDLLHGRTVHSKVNGLKIFKNVKVDLIAPEELQMPEHYIEKMKKNGFEVRIFSSIEEYLK  239 (524)
T ss_pred             HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHCCCHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf             99999983877785599997443457118889988876248389998878806988999999866914885104999870


Q ss_pred             CCCE---EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCC-CCCHHHHCCCCCHHHHHHHH
Q ss_conf             8622---1000113312333444455542023575889998379985995589987687-44767976997016868775
Q gi|254780300|r  217 NVDV---IMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNY-EISSSVADGSQSIIQYQVEM  292 (316)
Q Consensus       217 ~aDv---v~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~-Ev~~~v~d~~~s~v~~Qa~N  292 (316)
T Consensus       240 ~~~~a~iwyftrlqlermge~ilek~~~lr~~vtf~k~~l~~~pe~~kfyhplpr~~~~ptip~fld~~plngwe~qa~n  319 (524)
T PRK13376        240 QKDVAKIWYFTRLQLERMGEDILEKEHILRKSVTFRKEFLDKLPEGVKFYHPLPRHKVYPTIPTFLDTLPLNGWETQAIN  319 (524)
T ss_pred             CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
T ss_conf             47611247750888987778888889998765202787875363666003668855568987642357888715555305


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             6999999999997781
Q gi|254780300|r  293 GVAVRMAIIKELLENQ  308 (316)
Q Consensus       293 rl~~~~AlL~~~l~~~  308 (316)
T Consensus       320 gy~~r~vllsm-lgga  334 (524)
T PRK13376        320 GYWVRIVLLSM-LGGA  334 (524)
T ss_pred             CEEHHHHHHHH-HCCC
T ss_conf             54469999998-5464