HHsearch alignment for GI: 254780300 and conserved domain: TIGR03316
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=100.00 E-value=0 Score=619.06 Aligned_cols=296 Identities=20% Similarity=0.260 Sum_probs=251.4
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77774178223899999999999999996442048775212897699996078733789999798761352111233332
Q gi|254780300|r 4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNS 83 (316)
Q Consensus 4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s 83 (316)
T Consensus 1 l~~kh~L~~~dls~~ei~~ll~~A~~lK~~~~~~~-~~~~L~gk~~~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~s 79 (357)
T TIGR03316 1 LREKDFILTWEWTRDELDTVLDVAFDLKRLRALNI-STKLFESGLGISLFRDNSTRTRFSFASAMNLLGLHAQDLDEGKS 79 (357)
T ss_pred CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99888288112899999999999999987764688-77557898899997389840389999999985995999783224
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCEEEECCCC-----CHHHHHHCC-----------CCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 101333422479998741367146520321-----005542001-----------2342111123456631223322222
Q gi|254780300|r 84 AMKKGENIADTIATLNALRPNIIVIRHPYS-----GAVNSLMHK-----------IKGPSIINAGDGTHEHPSQALLDAF 147 (316)
Q Consensus 84 ~~~kgEs~~Dta~vls~~~~d~iv~R~~~~-----~~~~~~a~~-----------~s~ppVINag~~~~~HP~Q~LaDl~ 147 (316)
T Consensus 80 s~~kGEsv~DTarvls~y-~D~IviR~~~~~~~~~~~~~e~a~~~~~~~~~~~~~s~vP-VINal~d-~~HPtQaLaDl~ 156 (357)
T TIGR03316 80 QIGHGETVRETAEMISFF-ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKDGVLEQRPP-LVNLQCD-IDHPTQAMADIM 156 (357)
T ss_pred CCCCCCCHHHHHHHHHHH-CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC-EEECCCC-CCCCHHHHHHHH
T ss_conf 476898879999999963-8889998243334037889999987655443102236898-7837888-778369999999
Q ss_pred HHHCCCCCCC---CCCEEECCCC-----CCCCHHHHHHHHHHCCCCEEEECCCCCCCCC-C----------CCCCCCCCC
Q ss_conf 2201222100---0100103554-----4330133446642013420553277532221-1----------212343300
Q gi|254780300|r 148 AIRHFKGKIS---NLHIAICGDI-----LHSRVARSDIMLLNTMGARIRVIAPITLLPK-D----------ISNMGVEVF 208 (316)
Q Consensus 148 Ti~e~~g~l~---~l~ia~vGD~-----~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~-~----------~~~~~~~~~ 208 (316)
T Consensus 157 Ti~e~~G~~~~l~g~~v~i~~~~~~~~g~~~~Va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~ 236 (357)
T TIGR03316 157 TLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIV 236 (357)
T ss_pred HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 99998487224677748999861255651537999999999975980999778423678799999999999819928997
Q ss_pred CCHHHCCCCCCEEEEEEECCHHHHHHHH------------------HHHHHHCCCCCCCHHHHHHCCC-CCEEECCCCCC
Q ss_conf 5845603686221000113312333444------------------4555420235758899983799-85995589987
Q gi|254780300|r 209 HDMQKGLKNVDVIMILRMQQERIPRSLI------------------PSIREYKHVYSLDEKKLKYAKK-DALVMHPGPIN 269 (316)
Q Consensus 209 ~d~~ea~~~aDvv~~~~~~~e~~~~~~~------------------~~~~~~~~~~~v~~~~l~~a~~-~ai~mHcLP~~ 269 (316)
T Consensus 237 ~d~~eav~~aDVvytd~W~sm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~m~~a~~~~ai~MHclPa~ 316 (357)
T TIGR03316 237 NSMDEAFKDADIVYPKSWAPIAAMEKRTELYTGSDTEGAELLEQELLSQNKKHKDWVCTEERMALTHDGEALYMHCLPAD 316 (357)
T ss_pred CCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCC
T ss_conf 59999956899998366401378888998860110567888777666567750475116999974789796997999798
Q ss_pred ------CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf ------6874476797699701686877569999999999
Q gi|254780300|r 270 ------RNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKE 303 (316)
Q Consensus 270 ------Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~ 303 (316)
T Consensus 317 ~RGv~~R~~EIt~eV~d~~~S~i~~QAeNrl~~~~AvLaa 356 (357)
T TIGR03316 317 IRGVSCEEGEVTEEVFDGYRSVIYKEASNKPYTIAAMIAA 356 (357)
T ss_pred CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 7788887771489996799970998875049999999852