HHsearch alignment for GI: 254780300 and conserved domain: TIGR03316

>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=100.00  E-value=0  Score=619.06  Aligned_cols=296  Identities=20%  Similarity=0.260  Sum_probs=251.4

Q ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             77774178223899999999999999996442048775212897699996078733789999798761352111233332
Q gi|254780300|r    4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNS   83 (316)
Q Consensus         4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s   83 (316)
T Consensus         1 l~~kh~L~~~dls~~ei~~ll~~A~~lK~~~~~~~-~~~~L~gk~~~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~s   79 (357)
T TIGR03316         1 LREKDFILTWEWTRDELDTVLDVAFDLKRLRALNI-STKLFESGLGISLFRDNSTRTRFSFASAMNLLGLHAQDLDEGKS   79 (357)
T ss_pred             CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             99888288112899999999999999987764688-77557898899997389840389999999985995999783224


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCEEEECCCC-----CHHHHHHCC-----------CCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             101333422479998741367146520321-----005542001-----------2342111123456631223322222
Q gi|254780300|r   84 AMKKGENIADTIATLNALRPNIIVIRHPYS-----GAVNSLMHK-----------IKGPSIINAGDGTHEHPSQALLDAF  147 (316)
Q Consensus        84 ~~~kgEs~~Dta~vls~~~~d~iv~R~~~~-----~~~~~~a~~-----------~s~ppVINag~~~~~HP~Q~LaDl~  147 (316)
T Consensus        80 s~~kGEsv~DTarvls~y-~D~IviR~~~~~~~~~~~~~e~a~~~~~~~~~~~~~s~vP-VINal~d-~~HPtQaLaDl~  156 (357)
T TIGR03316        80 QIGHGETVRETAEMISFF-ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKDGVLEQRPP-LVNLQCD-IDHPTQAMADIM  156 (357)
T ss_pred             CCCCCCCHHHHHHHHHHH-CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC-EEECCCC-CCCCHHHHHHHH
T ss_conf             476898879999999963-8889998243334037889999987655443102236898-7837888-778369999999


Q ss_pred             HHHCCCCCCC---CCCEEECCCC-----CCCCHHHHHHHHHHCCCCEEEECCCCCCCCC-C----------CCCCCCCCC
Q ss_conf             2201222100---0100103554-----4330133446642013420553277532221-1----------212343300
Q gi|254780300|r  148 AIRHFKGKIS---NLHIAICGDI-----LHSRVARSDIMLLNTMGARIRVIAPITLLPK-D----------ISNMGVEVF  208 (316)
Q Consensus       148 Ti~e~~g~l~---~l~ia~vGD~-----~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~-~----------~~~~~~~~~  208 (316)
T Consensus       157 Ti~e~~G~~~~l~g~~v~i~~~~~~~~g~~~~Va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~  236 (357)
T TIGR03316       157 TLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIV  236 (357)
T ss_pred             HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             99998487224677748999861255651537999999999975980999778423678799999999999819928997


Q ss_pred             CCHHHCCCCCCEEEEEEECCHHHHHHHH------------------HHHHHHCCCCCCCHHHHHHCCC-CCEEECCCCCC
Q ss_conf             5845603686221000113312333444------------------4555420235758899983799-85995589987
Q gi|254780300|r  209 HDMQKGLKNVDVIMILRMQQERIPRSLI------------------PSIREYKHVYSLDEKKLKYAKK-DALVMHPGPIN  269 (316)
Q Consensus       209 ~d~~ea~~~aDvv~~~~~~~e~~~~~~~------------------~~~~~~~~~~~v~~~~l~~a~~-~ai~mHcLP~~  269 (316)
T Consensus       237 ~d~~eav~~aDVvytd~W~sm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~m~~a~~~~ai~MHclPa~  316 (357)
T TIGR03316       237 NSMDEAFKDADIVYPKSWAPIAAMEKRTELYTGSDTEGAELLEQELLSQNKKHKDWVCTEERMALTHDGEALYMHCLPAD  316 (357)
T ss_pred             CCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCC
T ss_conf             59999956899998366401378888998860110567888777666567750475116999974789796997999798


Q ss_pred             ------CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             ------6874476797699701686877569999999999
Q gi|254780300|r  270 ------RNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKE  303 (316)
Q Consensus       270 ------Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~  303 (316)
T Consensus       317 ~RGv~~R~~EIt~eV~d~~~S~i~~QAeNrl~~~~AvLaa  356 (357)
T TIGR03316       317 IRGVSCEEGEVTEEVFDGYRSVIYKEASNKPYTIAAMIAA  356 (357)
T ss_pred             CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             7788887771489996799970998875049999999852