HHsearch results for GI: 254780300 and protein with PDBid: 1pg5_A
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=100.00 E-value=0 Score=604.09 Aligned_cols=293 Identities=31% Similarity=0.456 Sum_probs=264.7
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC-CCCCCC
Q ss_conf 7741782238999999999999999964420487752128976999960787337899997987613521112-333321
Q gi|254780300|r 6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVINI-NTKNSA 84 (316)
Q Consensus 6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l-~~~~s~ 84 (316)
|||||+++||+++|+..||++|.++|+.+.. ..+.|+||+++++|+|||||||+|||+|+++|||+++++ ++++++
T Consensus 1 mkh~l~~~dls~~ei~~ll~~A~~~k~~~~~---~~~~l~gk~v~llF~k~StRTR~SFe~A~~~LGg~~i~~~~~~~~~ 77 (299)
T 1pg5_A 1 LKHIISAYNFSRDELEDIFALTDKYSKNLND---TRKILSGKTISIAFFEPSTRTYLSFQKAIINLGGDVIGFSGEESTS 77 (299)
T ss_dssp CCCBCSGGGCCHHHHHHHHHHHHHHHSCCTT---CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEECC----
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 9884860118999999999999999760166---6655799989999627873169999999998099621366631100
Q ss_pred CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf 01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r 85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC 164 (316)
Q Consensus 85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v 164 (316)
+++|||++||++|+|+| +|+|++|++.+..+.++++++++| |||||++.++||||+|+|++||+|++|++++++++|+
T Consensus 78 ~~~~Es~~Dt~~vls~~-~d~i~~R~~~~~~~~~~~~~s~vP-vINAg~~~~~HPtQ~LaDl~Ti~e~~g~~~~l~i~~~ 155 (299)
T 1pg5_A 78 VAKGENLADTIRMLNNY-SDGIVMRHKYDGASRFASEISDIP-VINAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALL 155 (299)
T ss_dssp ---CCCHHHHHHHHHHH-CSEEEEEESSBTHHHHHHHHCSSC-EEEEEETTTBCHHHHHHHHHHHHHHHSCSTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHCCCC-EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 57875199999998625-744898842320688877635773-1117776777856899999999998388555637885
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEE-ECCCCCCCCCC----CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHH
Q ss_conf 554433013344664201342055-32775322211----2123433005845603686221000113312333444455
Q gi|254780300|r 165 GDILHSRVARSDIMLLNTMGARIR-VIAPITLLPKD----ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSI 239 (316)
Q Consensus 165 GD~~~~~v~~S~~~~~~~~g~~v~-~~~P~~~~~~~----~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~ 239 (316)
||..|+||+||++.+++++|+.+. +++|+.+.+.. ..+..+..++++.++++++|+||+++|+.|++.... ..
T Consensus 156 gd~~~~~v~~S~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvvy~~~~~~~~~~~~~--~~ 233 (299)
T 1pg5_A 156 GDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEM--EY 233 (299)
T ss_dssp ECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHH--HH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHH--HH
T ss_conf 1776105778899999874886311258301354577765406874335698887078766875032224543078--88
Q ss_pred HHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 54202357588999837998599558998768744767976997016868775699999999999778
Q gi|254780300|r 240 REYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLEN 307 (316)
Q Consensus 240 ~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~ 307 (316)
++++..||||.++|+.++++++|||||| ||+||+++|+|+|+|+||+||+||+|+|||||.|+||.
T Consensus 234 ~~~~~~~~v~~~~~~~~~~~~ifmHcLP--rg~Ev~~~V~d~~~s~v~~Qa~Nrl~~~~AlL~~llg~ 299 (299)
T 1pg5_A 234 EKIKGSYIVSLDLANKMKKDSIILHPLP--RVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIYGE 299 (299)
T ss_dssp HHHGGGGSBCHHHHHTSCTTCEEECCSC--CSSSBCGGGGGSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8988887641999972698979979999--98762877746874779999981499999999998088