HHsearch results for GI: 254780300 and protein with PDBid: 1zq6_A
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00 E-value=0 Score=596.59 Aligned_cols=296 Identities=23% Similarity=0.337 Sum_probs=256.5
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r 3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN 82 (316)
Q Consensus 3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~ 82 (316)
++.|||||+++||+++|++.||++|.++|+.+ ..+.|+||+++++|+|||||||+|||+||.+|||+++++++..
T Consensus 20 ~m~mkhlLsi~dls~~ei~~l~~~A~~~k~~~-----~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ 94 (359)
T 1zq6_A 20 HMSLKHFLNTQDWSRAELDALLTQAALFKRNK-----LGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGK 94 (359)
T ss_dssp ---CCCBSCGGGSCHHHHHHHHHHHHHHHHCC-----CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHH
T ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 88666507523399999999999999998367-----8766899989998558971089999999998599589827877
Q ss_pred ------------CCCCCCCCCCCHHHHHHHHCCCCEEEECC----------CCCHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf ------------21013334224799987413671465203----------21005542001234211112345663122
Q gi|254780300|r 83 ------------SAMKKGENIADTIATLNALRPNIIVIRHP----------YSGAVNSLMHKIKGPSIINAGDGTHEHPS 140 (316)
Q Consensus 83 ------------s~~~kgEs~~Dta~vls~~~~d~iv~R~~----------~~~~~~~~a~~~s~ppVINag~~~~~HP~ 140 (316)
++.++|||++||++++++| +|+||+|++ .++.+.++++++++| |||+| .++|||
T Consensus 95 s~~~~~~~~~s~~~~~~~Es~~Dt~~~ls~y-~D~iviR~~~~~~~~~~~~~~~~~~~~a~~~~vp-vin~g--~~~HPt 170 (359)
T 1zq6_A 95 DAWPIEFNLGTVMDGDTEEHIAEVARVLGRY-VDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVP-VINME--TITHPC 170 (359)
T ss_dssp HSCCEECSSSCCCCSSCCEEHHHHHHHHHHH-CSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSC-EEESS--SSCCHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC-CCCCC--CCCCCH
T ss_conf 6442134666320366415799999987524-8789996364322200460168999999767986-21688--877854
Q ss_pred HHHHHHHHHHCCCCC--CCCCC----EEECCCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCCCCC-----------CCC
Q ss_conf 332222222012221--00010----010355443301334466420134205532775-322211-----------212
Q gi|254780300|r 141 QALLDAFAIRHFKGK--ISNLH----IAICGDILHSRVARSDIMLLNTMGARIRVIAPI-TLLPKD-----------ISN 202 (316)
Q Consensus 141 Q~LaDl~Ti~e~~g~--l~~l~----ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~-~~~~~~-----------~~~ 202 (316)
|+|+|+|||+|.||. ++|++ ++|+||+.||||++|++.+++++|+++++++|+ .+.|.. ..+
T Consensus 171 QaLlDl~Ti~e~~g~~~~~g~~~~~~~~~~gd~~~~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g 250 (359)
T 1zq6_A 171 QELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG 250 (359)
T ss_dssp HHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 78999999999719832258637898511478554378888888898759879998068435888899999877788708
Q ss_pred CCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHH--HHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHC
Q ss_conf 3433005845603686221000113312333444--45554202357588999837998599558998768744767976
Q gi|254780300|r 203 MGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLI--PSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVAD 280 (316)
Q Consensus 203 ~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~--~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d 280 (316)
..+++++|+++++++|||||+++||+|++.+... ....++...|++|+++++.+ ++++||||||++||+||+++|+|
T Consensus 251 ~~i~~~~d~~ea~~~aDvvyt~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~~~i~MHplP~~Rg~EI~~eV~d 329 (359)
T 1zq6_A 251 GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMD 329 (359)
T ss_dssp CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTS-SSCEEECCSCCCBTTTBCHHHHT
T ss_pred CCEEEECCHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCC-CCCEEECCCCCCCCCCCCHHHHC
T ss_conf 86189558889845966999853773011540356799999876348279996378-99989899999998833876757
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9970168687756999999999997781
Q gi|254780300|r 281 GSQSIIQYQVEMGVAVRMAIIKELLENQ 308 (316)
Q Consensus 281 ~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~ 308 (316)
+|+|+||+||+||+|+|||||+++||..
T Consensus 330 ~p~s~i~~Qa~Ngl~vrmAlL~~llg~~ 357 (359)
T 1zq6_A 330 SPNCIAIDEAENRLHVQKAIMAALVGQS 357 (359)
T ss_dssp STTBCHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9975699998730999999999985788