HHsearch results for GI: 254780300 and protein with PDBid: 2at2_A
>2at2_A Aspartate carbamoyltransferase; 3.00A {Bacillus subtilis} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=0 Score=630.81 Aligned_cols=298 Identities=36% Similarity=0.560 Sum_probs=278.2
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 77417822389999999999999999644204877521289769999607873378999979876135211123333210
Q gi|254780300|r 6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAM 85 (316)
Q Consensus 6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~ 85 (316)
|||||+++||+++|++.||++|.++|+++. .+.|+||+++++|+|||||||+|||+|+.+|||+++++++.++++
T Consensus 1 Mkh~lsi~dls~~ei~~ll~~A~~lK~~~~-----~~~L~gK~v~llF~~pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~ 75 (300)
T 2at2_A 1 MKHLTTMSELSTEEIKDLLQTAQELKSGKT-----DNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSV 75 (300)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCC-----CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf 988386011899999999999999875898-----776899858998717970489999999998198599960001136
Q ss_pred CCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECC
Q ss_conf 13334224799987413671465203210055420012342111123456631223322222220122210001001035
Q gi|254780300|r 86 KKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICG 165 (316)
Q Consensus 86 ~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vG 165 (316)
++||+++||++++++|++|++++|++.++.+.++++++++| |||||+|..+||||+|+|++||+|.+|+++|++|+|+|
T Consensus 76 ~~gEs~~dt~~~l~~~~~d~iv~r~~~~~~~~~~a~~s~vP-VINAg~~~~~HPtQaLaD~~Ti~e~~g~~~gl~ia~vG 154 (300)
T 2at2_A 76 QKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIP-ILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHG 154 (300)
T ss_pred CCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 68876899999633101503678523201688864036874-22078887668579998899999987602798220257
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf 54433013344664201342055327753222112123433005845603686221000113312333444455542023
Q gi|254780300|r 166 DILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHV 245 (316)
Q Consensus 166 D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~ 245 (316)
|+.|+||++|++.++..+|+++.+++|+++.+... ...++.+++++++++|++|+++|+.|++.+. ...+++..+
T Consensus 155 D~~~~~v~~s~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~a~~~aDvv~~~~~~~~~~~~~--~~~~~~~~~ 229 (300)
T 2at2_A 155 DIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEEN---TFGTYVSMDEAVESSDVVMLLRIQNERHQSA--VSQEGYLNK 229 (300)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECHHHHCCCHH---HCCEEECHHHHHHHCCEEEEEEECCCCCCCH--HHHHHHHHH
T ss_conf 86421568999999883598289958036285422---1343633878542068677632112112211--246888762
Q ss_pred CCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 575889998379985995589987687447679769970168687756999999999997781422201
Q gi|254780300|r 246 YSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNKITQK 314 (316)
Q Consensus 246 ~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~~~~~ 314 (316)
||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+|+++.+..++
T Consensus 230 ~~v~~~~l~~a~~~ai~mHcLP~~rg~EV~~~V~d~p~s~v~~QAeNrl~~~~AlL~~~L~~~~~~~~~ 298 (300)
T 2at2_A 230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQCALQTNVKRGEA 298 (300)
T ss_pred HCCHHHHHHHCCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHCCCC
T ss_conf 003299997279998997998888996318867269855499999662999999999998521121244